Query psy9568
Match_columns 248
No_of_seqs 223 out of 2401
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 22:56:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.9 2.9E-28 9.9E-33 206.9 9.8 163 19-191 149-312 (324)
2 2ygq_A WIF-1, WNT inhibitory f 99.8 1.1E-21 3.7E-26 166.5 6.9 128 20-153 182-309 (324)
3 2vj2_A Jagged-1; signalling, p 99.8 2.1E-21 7E-26 150.2 5.1 143 35-187 17-169 (169)
4 3fcs_B Integrin beta-3; beta p 99.8 3.7E-20 1.3E-24 170.1 13.6 176 2-188 413-629 (690)
5 2vj2_A Jagged-1; signalling, p 99.8 5.1E-19 1.7E-23 136.7 6.8 126 24-152 39-169 (169)
6 3k6s_B Integrin beta-2; cell r 99.8 1.3E-18 4.5E-23 159.5 8.4 153 24-188 436-624 (687)
7 2vj3_A Neurogenic locus notch 99.6 8.5E-16 2.9E-20 114.2 7.9 104 87-195 13-127 (135)
8 3fcs_B Integrin beta-3; beta p 99.6 4.2E-15 1.4E-19 136.7 9.9 129 56-187 441-600 (690)
9 2gy5_A Angiopoietin-1 receptor 99.6 6.2E-15 2.1E-19 129.1 10.2 144 36-186 186-349 (423)
10 3k6s_B Integrin beta-2; cell r 99.5 7E-15 2.4E-19 135.0 7.5 129 55-187 435-592 (687)
11 2vj3_A Neurogenic locus notch 99.5 2.3E-14 7.7E-19 106.5 8.8 97 18-114 5-119 (135)
12 1z1y_A Ookinete surface protei 99.5 3.8E-16 1.3E-20 122.4 -1.0 73 23-96 11-106 (186)
13 1z1y_A Ookinete surface protei 99.5 1.1E-15 3.7E-20 119.9 -0.7 129 54-188 10-176 (186)
14 2gy5_A Angiopoietin-1 receptor 99.5 1.4E-13 4.8E-18 120.6 10.9 154 19-184 196-380 (423)
15 4d90_A EGF-like repeat and dis 99.5 9.8E-14 3.3E-18 104.0 8.2 63 125-189 58-135 (143)
16 4d90_A EGF-like repeat and dis 99.5 2.4E-13 8.1E-18 101.9 9.3 109 23-152 6-133 (143)
17 2p28_B Integrin beta-2; hybrid 99.4 1.6E-13 5.6E-18 109.3 5.2 64 87-152 143-214 (217)
18 2bou_A EGF-like module contain 99.4 2.7E-13 9.2E-18 101.6 5.2 63 18-80 2-81 (143)
19 4fbr_A Lectin, myxobacterial h 99.3 3.9E-16 1.3E-20 127.0 -13.4 150 23-193 38-208 (267)
20 2bou_A EGF-like module contain 99.3 5.3E-12 1.8E-16 94.5 6.1 61 53-113 5-82 (143)
21 1tpg_A T-plasminogen activator 99.2 2.6E-11 9E-16 83.5 5.0 20 171-190 70-89 (91)
22 1tpg_A T-plasminogen activator 99.1 3E-11 1E-15 83.2 4.6 74 35-113 2-85 (91)
23 2p28_B Integrin beta-2; hybrid 99.1 3.4E-11 1.2E-15 95.9 4.8 106 55-187 96-214 (217)
24 1yo8_A Thrombospondin-2; EGF, 99.1 3.1E-10 1E-14 103.3 8.1 63 19-81 4-85 (634)
25 4fbr_A Lectin, myxobacterial h 99.0 3E-13 1E-17 110.1 -10.8 142 24-183 106-265 (267)
26 2wg3_C Hedgehog-interacting pr 99.0 4.6E-11 1.6E-15 105.9 0.9 77 37-114 379-455 (463)
27 1klo_A Laminin; glycoprotein; 99.0 4.7E-10 1.6E-14 85.6 4.9 71 24-114 2-91 (162)
28 1yo8_A Thrombospondin-2; EGF, 98.8 2.7E-09 9.4E-14 97.0 5.9 105 55-159 9-153 (634)
29 1dx5_I Thrombomodulin; serine 98.8 6.7E-10 2.3E-14 80.2 0.6 29 19-49 5-38 (118)
30 2wg3_C Hedgehog-interacting pr 98.8 8.2E-10 2.8E-14 97.9 0.7 76 70-152 380-455 (463)
31 1uzk_A Fibrillin-1; glycoprote 98.8 2.8E-10 9.7E-15 86.8 -2.6 74 98-185 74-157 (162)
32 1dx5_I Thrombomodulin; serine 98.7 6.3E-09 2.2E-13 75.0 2.6 76 98-183 23-111 (118)
33 2w86_A Fibrillin-1, fibrillin1 98.6 1.4E-09 4.8E-14 81.6 -3.0 46 137-185 88-142 (147)
34 1uzk_A Fibrillin-1; glycoprote 98.5 3.6E-09 1.2E-13 80.7 -3.1 121 18-149 3-156 (162)
35 4aqs_A Laminin subunit beta-1; 98.5 1.8E-07 6.1E-12 84.3 7.1 59 129-187 451-525 (525)
36 2w86_A Fibrillin-1, fibrillin1 98.4 7.4E-09 2.5E-13 77.6 -2.8 114 18-149 4-141 (147)
37 1aut_L Activated protein C; se 98.3 6.1E-07 2.1E-11 64.1 4.8 27 23-49 20-49 (114)
38 1aut_L Activated protein C; se 98.2 8.1E-07 2.8E-11 63.4 3.6 57 126-183 21-86 (114)
39 1x7a_L Coagulation factor IX, 98.2 8.2E-07 2.8E-11 66.3 3.6 59 125-187 54-126 (146)
40 1emn_A Fibrillin; extracellula 98.2 1E-06 3.5E-11 59.0 3.6 56 125-184 12-77 (82)
41 4aqs_A Laminin subunit beta-1; 98.1 1.4E-06 4.7E-11 78.5 4.6 86 67-152 418-525 (525)
42 2c4f_L Coagulation factor VII 98.1 1.6E-06 5.5E-11 64.4 3.8 33 82-114 47-83 (142)
43 3u7u_G Neuregulin 1; signaling 98.1 1.4E-06 4.7E-11 53.4 2.7 31 160-190 13-52 (55)
44 1nfu_B Coagulation factor XA, 98.1 7.7E-07 2.6E-11 69.5 1.6 75 75-152 35-121 (195)
45 1x7a_L Coagulation factor IX, 98.1 1.9E-06 6.4E-11 64.3 3.5 58 55-114 54-126 (146)
46 1nfu_B Coagulation factor XA, 98.1 9.7E-07 3.3E-11 68.9 1.8 63 50-114 42-121 (195)
47 1z6c_A Vitamin K-dependent pro 98.1 2.2E-06 7.4E-11 58.1 3.3 61 127-193 13-84 (87)
48 1emn_A Fibrillin; extracellula 98.0 2.7E-06 9.1E-11 56.9 3.3 25 24-49 13-42 (82)
49 2c4f_L Coagulation factor VII 98.0 3E-06 1E-10 62.9 3.2 60 55-114 53-129 (142)
50 2vh0_B Activated factor XA lig 98.0 8E-07 2.7E-11 65.4 -0.7 59 126-186 49-120 (134)
51 2vh0_B Activated factor XA lig 97.9 2.1E-06 7.3E-11 63.0 1.2 69 81-152 41-121 (134)
52 1n7d_A LDL receptor, low-densi 97.9 0.00077 2.6E-08 62.7 17.6 147 24-183 182-365 (699)
53 3zyj_B Netrin-G1; cell adhesio 97.8 5.6E-06 1.9E-10 71.7 2.1 27 24-50 298-328 (426)
54 3h5c_B Vitamin K-dependent pro 97.8 2.7E-05 9.3E-10 65.3 6.3 63 83-147 6-75 (317)
55 3u7u_G Neuregulin 1; signaling 97.8 1.2E-05 4.1E-10 49.2 2.9 16 137-152 34-49 (55)
56 2w2n_E LDL receptor, low-densi 97.8 7.8E-06 2.7E-10 57.5 2.0 13 136-148 88-100 (107)
57 3h5c_B Vitamin K-dependent pro 97.8 3.7E-05 1.3E-09 64.5 6.4 55 55-111 11-77 (317)
58 1lmj_A Fibrillin 1; EGF, calci 97.7 1.3E-05 4.4E-10 54.0 2.4 53 127-183 13-79 (86)
59 2w2n_E LDL receptor, low-densi 97.7 9E-06 3.1E-10 57.2 1.6 70 103-184 18-101 (107)
60 1klo_A Laminin; glycoprotein; 97.7 3E-05 1E-09 58.8 4.6 17 136-152 130-146 (162)
61 1edm_B Factor IX; epidermal gr 97.7 2.3E-05 7.8E-10 44.4 2.9 27 160-186 8-38 (39)
62 3zyj_B Netrin-G1; cell adhesio 97.7 1.3E-05 4.4E-10 69.4 2.0 27 126-152 372-398 (426)
63 1edm_B Factor IX; epidermal gr 97.6 4.2E-05 1.4E-09 43.2 2.9 31 19-49 4-38 (39)
64 1k36_A Epiregulin; EGF-like fo 97.6 2.6E-05 8.9E-10 45.9 1.7 27 161-187 12-43 (46)
65 1a3p_A Epidermal growth factor 97.5 3.6E-05 1.2E-09 45.0 2.2 28 162-189 10-43 (45)
66 3ca7_A Protein spitz; argos, E 97.5 5.1E-06 1.8E-10 50.4 -1.7 14 68-81 34-47 (52)
67 1egf_A Epidermal growth factor 97.4 0.00012 4E-09 44.5 3.5 27 24-50 13-44 (53)
68 1z6c_A Vitamin K-dependent pro 97.4 6.2E-05 2.1E-09 50.7 2.5 18 27-44 14-34 (87)
69 2ygo_A WIF-1, WNT inhibitory f 97.4 7.5E-05 2.6E-09 57.1 2.8 31 51-81 149-179 (188)
70 3ca7_A Protein spitz; argos, E 97.4 1.5E-05 5.1E-10 48.3 -1.0 14 100-113 34-47 (52)
71 1lmj_A Fibrillin 1; EGF, calci 97.4 9.5E-05 3.3E-09 49.7 2.9 53 89-148 13-79 (86)
72 2ygo_A WIF-1, WNT inhibitory f 97.4 9.7E-05 3.3E-09 56.5 3.2 38 77-114 143-180 (188)
73 1egf_A Epidermal growth factor 97.3 0.00015 5.2E-09 43.9 3.1 29 162-190 13-47 (53)
74 1a3p_A Epidermal growth factor 97.3 0.00021 7.2E-09 41.7 3.1 15 99-113 26-40 (45)
75 1hae_A Heregulin-alpha; growth 97.2 0.00016 5.6E-09 45.5 2.2 23 171-193 31-53 (63)
76 1k36_A Epiregulin; EGF-like fo 97.1 0.00025 8.6E-09 41.6 2.1 26 24-50 13-43 (46)
77 3m0c_C LDL receptor, low-densi 97.0 0.0008 2.7E-08 63.4 6.4 129 38-182 218-382 (791)
78 1hae_A Heregulin-alpha; growth 97.0 0.00026 9E-09 44.5 1.7 28 23-50 12-47 (63)
79 2k2s_B Micronemal protein 6; m 96.9 9.6E-05 3.3E-09 46.2 -0.6 35 16-50 9-50 (61)
80 1nql_B Epidermal growth factor 96.8 0.0004 1.4E-08 42.1 1.5 29 22-50 11-44 (53)
81 1nql_B Epidermal growth factor 96.7 0.00027 9.3E-09 42.8 0.3 28 161-188 12-45 (53)
82 2k2s_B Micronemal protein 6; m 96.7 0.00023 8E-09 44.4 -0.3 31 157-187 12-50 (61)
83 2p26_A Integrin beta-2; hybrid 96.7 0.0018 6.2E-08 53.1 4.8 56 57-114 198-275 (280)
84 2e26_A Reelin, reeler protein; 96.6 0.00029 1E-08 64.5 -0.0 49 37-86 520-569 (725)
85 1n7d_A LDL receptor, low-densi 96.6 0.094 3.2E-06 48.6 16.3 118 70-194 200-339 (699)
86 3p5b_L Low density lipoprotein 96.6 0.0024 8E-08 55.3 5.1 49 131-183 12-71 (400)
87 2fd6_A Urokinase-type plasmino 96.5 0.0019 6.4E-08 46.3 3.3 56 126-187 2-63 (122)
88 2y38_A Laminin subunit alpha-5 96.4 0.0049 1.7E-07 53.1 5.9 26 24-49 267-300 (403)
89 3ltf_D Protein spitz; receptor 96.3 0.0011 3.8E-08 40.8 1.1 27 24-50 15-48 (58)
90 2fd6_A Urokinase-type plasmino 96.2 0.0029 1E-07 45.3 2.9 55 24-81 2-62 (122)
91 4aqt_A Laminin subunit gamma-1 96.1 0.0045 1.6E-07 52.9 4.1 19 99-117 272-290 (375)
92 3e50_C Protransforming growth 96.1 0.0033 1.1E-07 37.3 2.3 28 160-187 13-45 (50)
93 3p5b_L Low density lipoprotein 95.9 0.0037 1.3E-07 54.0 3.0 53 24-78 7-71 (400)
94 3v65_B Low-density lipoprotein 95.9 0.0021 7.3E-08 55.2 1.2 48 135-186 22-82 (386)
95 3ltf_D Protein spitz; receptor 95.6 0.0047 1.6E-07 38.0 1.7 27 56-82 15-48 (58)
96 3m0c_C LDL receptor, low-densi 95.6 0.0099 3.4E-07 56.0 4.6 11 98-108 371-381 (791)
97 2y38_A Laminin subunit alpha-5 95.4 0.018 6.1E-07 49.6 5.2 16 171-186 356-372 (403)
98 2p26_A Integrin beta-2; hybrid 95.4 0.0076 2.6E-07 49.4 2.7 59 92-152 201-275 (280)
99 1iox_A Betacellulin; EGF-like 95.3 0.0053 1.8E-07 36.5 1.2 28 161-188 14-46 (50)
100 2rnl_A Amphiregulin; AR, color 95.2 0.0081 2.8E-07 35.6 1.6 26 161-186 18-48 (50)
101 1xdt_R Hbegf, heparin-binding 95.1 0.008 2.7E-07 39.2 1.6 28 160-187 45-77 (79)
102 3v65_B Low-density lipoprotein 95.0 0.0063 2.2E-07 52.2 1.1 50 30-81 16-82 (386)
103 2e26_A Reelin, reeler protein; 94.9 0.0049 1.7E-07 56.6 0.3 45 70-115 521-566 (725)
104 4aqt_A Laminin subunit gamma-1 94.2 0.038 1.3E-06 47.2 4.1 15 35-49 272-286 (375)
105 1g1s_A P-selectin; selectin, l 93.9 0.013 4.4E-07 43.7 0.6 28 87-114 125-155 (162)
106 1g1s_A P-selectin; selectin, l 93.7 0.014 4.8E-07 43.5 0.4 33 160-193 124-160 (162)
107 2i9a_A Urokinase-type plasmino 93.6 0.053 1.8E-06 39.9 3.5 28 24-51 14-47 (145)
108 3e50_C Protransforming growth 93.5 0.057 1.9E-06 31.9 2.7 15 35-49 30-44 (50)
109 2i9a_A Urokinase-type plasmino 92.8 0.092 3.1E-06 38.6 3.6 15 138-152 32-46 (145)
110 2ddu_A Reelin; beta-jelly-roll 92.7 0.02 6.9E-07 48.7 -0.0 30 17-47 190-219 (387)
111 3nt1_A Prostaglandin-endoperox 92.3 0.046 1.6E-06 49.5 1.7 29 160-188 6-40 (587)
112 2rnl_A Amphiregulin; AR, color 92.0 0.12 4.1E-06 30.5 2.7 14 36-49 35-48 (50)
113 1q4g_A Prostaglandin G/H synth 91.3 0.063 2.1E-06 48.3 1.4 31 20-50 4-40 (553)
114 3nt1_A Prostaglandin-endoperox 91.3 0.082 2.8E-06 47.8 2.2 31 20-50 3-39 (587)
115 1xdt_R Hbegf, heparin-binding 91.1 0.12 4.2E-06 33.5 2.3 15 35-49 62-76 (79)
116 1iox_A Betacellulin; EGF-like 91.0 0.081 2.8E-06 31.2 1.3 27 88-115 15-46 (50)
117 3cfw_A L-selectin; EGF, cell a 90.2 0.13 4.4E-06 38.2 2.1 28 55-82 125-155 (164)
118 1g1t_A E-selectin; EGF, adhesi 90.0 0.056 1.9E-06 39.9 -0.0 27 126-152 126-155 (157)
119 1q4g_A Prostaglandin G/H synth 89.9 0.11 3.6E-06 46.9 1.6 28 87-114 8-40 (553)
120 3cfw_A L-selectin; EGF, cell a 88.9 0.15 5.2E-06 37.8 1.6 26 88-113 126-154 (164)
121 1g1t_A E-selectin; EGF, adhesi 88.6 0.08 2.7E-06 39.0 -0.1 29 160-188 124-156 (157)
122 1n1i_A Merozoite surface prote 86.2 0.76 2.6E-05 31.4 3.6 33 14-46 6-43 (105)
123 1ob1_C Major merozoite surface 84.5 1.4 4.6E-05 29.9 4.2 27 20-46 6-37 (99)
124 1apq_A Complement protease C1R 83.9 0.53 1.8E-05 27.6 1.9 21 162-183 21-44 (53)
125 3t3p_B Integrin beta-3; integr 83.7 0.35 1.2E-05 42.4 1.4 25 56-81 447-472 (472)
126 3fl7_A Ephrin receptor; ATP-bi 81.9 1.6 5.4E-05 39.1 4.9 20 25-44 252-272 (536)
127 3g5c_A ADAM 22; alpha/beta fol 80.4 0.89 3E-05 40.4 2.7 26 56-81 455-480 (510)
128 3asi_A Neurexin-1-alpha; beta- 78.7 0.94 3.2E-05 38.9 2.3 26 56-81 192-221 (410)
129 1gl4_A Nidogen-1, entactin; im 78.6 0.49 1.7E-05 38.6 0.4 32 18-49 5-44 (285)
130 3v4v_B Integrin beta-7; cell a 77.8 0.95 3.3E-05 39.9 2.1 24 2-25 435-459 (503)
131 3g5c_A ADAM 22; alpha/beta fol 76.4 1.1 3.6E-05 39.9 2.0 31 20-50 446-481 (510)
132 3asi_A Neurexin-1-alpha; beta- 74.9 1.3 4.5E-05 37.9 2.2 31 158-188 187-223 (410)
133 2ddu_A Reelin; beta-jelly-roll 72.3 0.68 2.3E-05 39.4 -0.3 25 53-78 194-218 (387)
134 1kig_L Factor XA; glycoprotein 68.5 1.2 4E-05 26.1 0.3 21 170-191 17-41 (51)
135 2jkh_L Factor X light chain; p 66.8 1.3 4.5E-05 26.3 0.2 12 170-181 20-31 (55)
136 2bz6_L Blood coagulation facto 66.7 1.4 4.7E-05 26.0 0.3 21 171-192 20-44 (53)
137 2kl7_A Fibulin-4; secreted, ca 66.5 2.8 9.5E-05 26.4 1.7 24 125-148 11-38 (71)
138 1gl4_A Nidogen-1, entactin; im 66.4 1.3 4.3E-05 36.2 0.1 21 88-108 14-37 (285)
139 1kli_L Factor VIIA; extrinsic 65.3 2.3 7.9E-05 26.6 1.2 11 171-181 26-36 (69)
140 3qcw_A Neurexin-1-alpha; synap 65.3 3.2 0.00011 41.1 2.7 33 158-190 1019-1057(1245)
141 3qcw_A Neurexin-1-alpha; synap 61.4 3.9 0.00013 40.4 2.5 26 56-81 1024-1053(1245)
142 1jlz_A Tityustoxin alpha-KTX; 57.4 2.4 8.3E-05 21.1 0.2 19 22-41 6-24 (26)
143 1cmr_A Charybdotoxin, alpha ch 45.1 14 0.00049 19.1 1.9 13 27-40 18-30 (31)
144 3fl7_A Ephrin receptor; ATP-bi 43.6 11 0.00037 33.7 2.2 20 57-76 252-272 (536)
145 1szb_A Mannose binding lectin- 37.0 5.3 0.00018 29.5 -0.8 12 170-181 146-157 (170)
146 1wz5_A Potassium channel block 36.8 11 0.00037 20.2 0.7 14 27-41 21-34 (35)
147 3fby_A COMP, cartilage oligome 34.5 16 0.00056 32.4 1.8 33 17-49 17-59 (551)
148 1pvz_A K+ toxin-like peptide; 29.4 8 0.00027 20.1 -0.6 18 21-39 13-30 (31)
149 1bah_A Charybdotoxin, chabii; 28.8 18 0.00061 19.6 0.7 13 27-40 24-36 (37)
150 2wph_E Coagulation factor IXA 28.6 17 0.00058 21.7 0.7 11 171-181 20-30 (59)
151 3t3p_B Integrin beta-3; integr 26.2 31 0.0011 30.2 2.2 15 172-186 458-472 (472)
152 2ktc_A Potassium channel toxin 23.9 29 0.00098 18.0 0.9 23 20-43 7-32 (34)
153 1zlg_A Anosmin 1; insulin-like 22.7 59 0.002 29.5 3.5 37 25-65 54-95 (680)
154 3t5o_A Complement component C6 21.8 39 0.0013 32.2 2.1 29 24-52 504-535 (913)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.95 E-value=2.9e-28 Score=206.93 Aligned_cols=163 Identities=45% Similarity=1.161 Sum_probs=89.7
Q ss_pred CCCCcCCCCCCEeecCCceeeCCCCcCCCCCcCCCCCCCCCCCeecCCCceeeCCCCccCCCCcCCCCCCCCCCceecCC
Q psy9568 19 GICTEKCLNGGKCVQKDTCECQKGFYGLRCEFCICTEKCLNGGKCVQKDTCECQKGFYGLRCEFSKCIIPCLNGGRCKGV 98 (248)
Q Consensus 19 ~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~C~~~C~~~g~C~~~ 98 (248)
..|+++|.++|.|++.+.|.|++||+|..|+...|..+|.++|+|+..+.|.|++||.|..|+.+.|..+|.++|+|...
T Consensus 149 ~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~ 228 (324)
T 2ygq_A 149 AECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFYP 228 (324)
T ss_dssp CCCSSCCCSSCEECTTSCEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCCBSCS
T ss_pred CCCCCCCCCCCEECCCCeEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCeeCCC
Confidence 57888999999999889999999999999998788889999999999999999999999999988899999999999988
Q ss_pred CceeCCCCcccCCCCccCCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCCCCcCCCCCCCCCCCCC-CccCCCCeeecC
Q psy9568 99 NKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYICPKPCKQ-GVCSAARTCACY 177 (248)
Q Consensus 99 ~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~c~~~C~~-g~C~~~~~C~C~ 177 (248)
+.|.|.+||+|..|+.. .|..+|.++|.|...++|.|.+||+|..|+. +.|..+|.+ |+|...++|.|+
T Consensus 229 ~~C~C~~G~~G~~C~~~------~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~----~~C~~~C~~~g~C~~~~~C~C~ 298 (324)
T 2ygq_A 229 GKCICPPGLEGEQCEIS------KCPQPCRNGGKCIGKSKCKCSKGYQGDLCSK----PVCEPGCGAHGTCHEPNKCQCQ 298 (324)
T ss_dssp SCBCCCTTCCTTTTC-----------------------------------------------------------------
T ss_pred CeeeCCCCccCCCCCcC------cCCCcCCCCCEECCCCEEECCCCCcCCCCcC----CCCCCCCCCCCEECCCCEeECC
Confidence 99999999999999852 3446899999999888999999999999985 456678865 999988999999
Q ss_pred CCCccCCCCCCCCC
Q psy9568 178 EGWFGRTCSQRSDS 191 (248)
Q Consensus 178 ~g~~G~~C~~~~~~ 191 (248)
+||+|..|+.....
T Consensus 299 ~G~~G~~C~~~~~~ 312 (324)
T 2ygq_A 299 EGWHGRHCNKRYEA 312 (324)
T ss_dssp --------------
T ss_pred CCCcCCCCCCCCcc
Confidence 99999999876544
No 2
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.84 E-value=1.1e-21 Score=166.51 Aligned_cols=128 Identities=43% Similarity=1.076 Sum_probs=58.1
Q ss_pred CCCcCCCCCCEeecCCceeeCCCCcCCCCCcCCCCCCCCCCCeecCCCceeeCCCCccCCCCcCCCCCCCCCCceecCCC
Q psy9568 20 ICTEKCLNGGKCVQKDTCECQKGFYGLRCEFCICTEKCLNGGKCVQKDTCECQKGFYGLRCEFSKCIIPCLNGGRCKGVN 99 (248)
Q Consensus 20 ~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~C~~~C~~~g~C~~~~ 99 (248)
.|..+|.++|.|+.++.|.|++||+|..|+...|..+|.++|+|+..++|.|++||.|..|+++.|..+|.++|.|.+.+
T Consensus 182 ~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~ 261 (324)
T 2ygq_A 182 LCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKS 261 (324)
T ss_dssp SSSSCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCCBSCSSCBCCCTTCCTTTTC------------------
T ss_pred CCCCCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECCCC
Confidence 56678999999998899999999999999988898999999999998999999999999999888988999999999889
Q ss_pred ceeCCCCcccCCCCccCCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCCCCcC
Q psy9568 100 KCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIW 153 (248)
Q Consensus 100 ~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~ 153 (248)
+|.|.+||+|+.|+.. .|..+|.++|.|...++|.|.+||+|.+|+..
T Consensus 262 ~C~C~~G~~G~~C~~~------~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~ 309 (324)
T 2ygq_A 262 KCKCSKGYQGDLCSKP------VCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKR 309 (324)
T ss_dssp ------------------------------------------------------
T ss_pred EEECCCCCcCCCCcCC------CCCCCCCCCCEECCCCEeECCCCCcCCCCCCC
Confidence 9999999999999852 34457889999997799999999999999863
No 3
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.83 E-value=2.1e-21 Score=150.22 Aligned_cols=143 Identities=29% Similarity=0.753 Sum_probs=113.8
Q ss_pred CceeeCCCCcCCCCCcCCCC--CCCCCCCeecCCCceeeCCCCccCCCCcCCCCCCCC-CCceecCCCceeCCCCcccCC
Q psy9568 35 DTCECQKGFYGLRCEFCICT--EKCLNGGKCVQKDTCECQKGFYGLRCEFSKCIIPCL-NGGRCKGVNKCRCPPGFLGDY 111 (248)
Q Consensus 35 ~~C~C~~G~~G~~C~~~~c~--~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~C~~~C~-~~g~C~~~~~C~C~~g~~g~~ 111 (248)
+.|.|++||+|..|+. .|. ..|.++++|...++|.|.+||+|..|+.+.|...|. .+|.|+..+.|.|.+||+|..
T Consensus 17 ~~c~C~~g~~G~~C~~-~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~ 95 (169)
T 2vj2_A 17 SAVTCDDYYYGFGCNK-FCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLY 95 (169)
T ss_dssp ----CCTTEETTTTCE-ECCCEEETTEEEEECSSCCEEECTTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSS
T ss_pred eeeeCCCcCcCCCccc-ccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCC
Confidence 6899999999999984 344 358888999888999999999999999888887786 678898889999999999999
Q ss_pred CCccCCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCCCCcCCCCCCC--CCCCCC-CccC----CCCeeecCCCCccCC
Q psy9568 112 CEIWQRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYIC--PKPCKQ-GVCS----AARTCACYEGWFGRT 184 (248)
Q Consensus 112 C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~c--~~~C~~-g~C~----~~~~C~C~~g~~G~~ 184 (248)
|+.-.. ...|.+ |+|+..++|.|.+||+|..|+.. +++| ..+|.+ |+|+ ++|+|.|++||+|..
T Consensus 96 C~~C~~------~~~C~~-g~C~~~~~C~C~~G~~G~~C~~~--~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~ 166 (169)
T 2vj2_A 96 CDKCIP------HPGCVH-GICNEPWQCLCETNWGGQLCDKD--LNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPN 166 (169)
T ss_dssp SCEECC------CTTCSS-EECSSTTCCEECTTEETTTTCEE--SCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTT
T ss_pred cccCCC------CCCCCC-CCcCCCCEEeCCCCCCCCcccCC--CCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcC
Confidence 974211 123665 58988899999999999999853 3445 378977 8887 458999999999999
Q ss_pred CCC
Q psy9568 185 CSQ 187 (248)
Q Consensus 185 C~~ 187 (248)
|++
T Consensus 167 Ce~ 169 (169)
T 2vj2_A 167 CEI 169 (169)
T ss_dssp SCC
T ss_pred cCC
Confidence 963
No 4
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.83 E-value=3.7e-20 Score=170.13 Aligned_cols=176 Identities=27% Similarity=0.650 Sum_probs=130.3
Q ss_pred ceeEEEEEeEE-EeeeccCCCC----c-CCCCCCEeec------CCceeeCCCCcCCCCCcC----------CCC-----
Q psy9568 2 RLNVAVVSLMT-ILLFVSGICT----E-KCLNGGKCVQ------KDTCECQKGFYGLRCEFC----------ICT----- 54 (248)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~C~----~-~C~~~g~C~~------~~~C~C~~G~~G~~C~~~----------~c~----- 54 (248)
+|.|+++.|.. +.+.....|. . +|.+++.|.+ .+.|.|++||+|..|+.. .|.
T Consensus 413 ~~~i~p~G~~e~l~v~v~~~C~C~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~ 492 (690)
T 3fcs_B 413 SFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQ 492 (690)
T ss_dssp EEEEEETTCSCCEEEEEEECCSCGGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSS
T ss_pred EEEEeecCCccceeeecccccccCCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCC
Confidence 46677777632 2333333333 2 4556666652 256999999999999743 254
Q ss_pred CCCCCCCeecCCCceeeC----CCCccCCCC--cCCCC----CCCCCCceecCCCceeCCCCcccCCCC--ccCCCCCCC
Q psy9568 55 EKCLNGGKCVQKDTCECQ----KGFYGLRCE--FSKCI----IPCLNGGRCKGVNKCRCPPGFLGDYCE--IWQRPYISK 122 (248)
Q Consensus 55 ~~C~~~g~C~~~~~C~C~----~g~~G~~C~--~~~C~----~~C~~~g~C~~~~~C~C~~g~~g~~C~--~~~~~~~~~ 122 (248)
.+|.++|+|+. ++|.|. +||.|..|+ .+.|. .+|.++|.|.. +.|.|.+||+|..|+ .....+...
T Consensus 493 ~~Cs~~G~C~~-g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~ 570 (690)
T 3fcs_B 493 PVCSQRGECLC-GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSS 570 (690)
T ss_dssp CGGGGSEEECS-SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSCEECCCTTTBCT
T ss_pred CCCCCCCEEEC-CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCccCCCCCcccCC
Confidence 24999999996 899999 999999997 45676 36999999986 999999999999998 222222211
Q ss_pred CCCCCCCCceeeCCCeeeC-CCCCCCCCCCcCCCCCCCCCCCCC-CccCCCCeeecCCCCccCCCCCC
Q psy9568 123 CIIPCLNGGRCKGVNKCRC-PPGFLGDYCEIWQRPYICPKPCKQ-GVCSAARTCACYEGWFGRTCSQR 188 (248)
Q Consensus 123 c~~~C~~~g~C~~~~~C~C-~~g~~g~~C~~~~~~~~c~~~C~~-g~C~~~~~C~C~~g~~G~~C~~~ 188 (248)
-..+|.++|.|.. +.|.| .+||+|..|+.. ..|+.+|.+ |.|+ .|.++|+|..|+..
T Consensus 571 ~g~~C~~~G~C~~-g~C~C~~~Gy~G~~Ce~C---~~C~~~C~~~g~Cv-----~C~~g~tG~~C~~~ 629 (690)
T 3fcs_B 571 NGLLCSGRGKCEC-GSCVCIQPGSYGDTCEKC---PTCPDACTFKKECV-----ECKKFDRGALHDEN 629 (690)
T ss_dssp TSSBTSSSCEEET-TEEECCSTTCBSTTSCBC---TTSCCTTTSCCGGG-----TTTTTCCSSSSSSS
T ss_pred CCCCCCCCCEEeC-CEEECCCCCccCCCcCcC---CCCCCCCCCCCCcc-----cCCCCCccCCCCcc
Confidence 1147999999986 79999 999999999862 346788976 8887 39999999977543
No 5
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.76 E-value=5.1e-19 Score=136.73 Aligned_cols=126 Identities=32% Similarity=0.752 Sum_probs=102.3
Q ss_pred CCCCCCEeecCCceeeCCCCcCCCCCcCCCCCCCC-CCCeecCCCceeeCCCCccCCCCcCCCCCCCCCCceecCCCcee
Q psy9568 24 KCLNGGKCVQKDTCECQKGFYGLRCEFCICTEKCL-NGGKCVQKDTCECQKGFYGLRCEFSKCIIPCLNGGRCKGVNKCR 102 (248)
Q Consensus 24 ~C~~~g~C~~~~~C~C~~G~~G~~C~~~~c~~~C~-~~g~C~~~~~C~C~~g~~G~~C~~~~C~~~C~~~g~C~~~~~C~ 102 (248)
.|.++++|+.++.|.|++||+|..|+...|...|. .+|.|++.++|.|++||.|..|+.-.....|.+ |+|++.++|.
T Consensus 39 ~c~~~g~C~~~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~~C~~~~~C~~-g~C~~~~~C~ 117 (169)
T 2vj2_A 39 DFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHPGCVH-GICNEPWQCL 117 (169)
T ss_dssp ETTEEEEECSSCCEEECTTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSCEECCCTTCSS-EECSSTTCCE
T ss_pred CcCCCCEeCCCCeeECCCCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCcccCCCCCCCCC-CCcCCCCEEe
Confidence 46678899878999999999999999877888887 678999889999999999999974222233775 4999889999
Q ss_pred CCCCcccCCCCccCCCCCCCCCCCCCCCceeeC----CCeeeCCCCCCCCCCCc
Q psy9568 103 CPPGFLGDYCEIWQRPYISKCIIPCLNGGRCKG----VNKCRCPPGFLGDYCEI 152 (248)
Q Consensus 103 C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~~----~~~C~C~~g~~g~~C~~ 152 (248)
|.+||+|..|+...+.+.. ..+|.++|+|+. .++|.|++||+|.+|++
T Consensus 118 C~~G~~G~~C~~~~~~C~~--~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 118 CETNWGGQLCDKDLNYCGT--HQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp ECTTEETTTTCEESCHHHH--TCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CCCCCCCCcccCCCCCCCC--CCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 9999999999854432211 158999999984 37999999999999873
No 6
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.75 E-value=1.3e-18 Score=159.48 Aligned_cols=153 Identities=33% Similarity=0.752 Sum_probs=115.9
Q ss_pred CCCCCCEeecCCceeeCCCCcCCCCCcC-----------CCC-----CCCCCCCeecCCCceeeC------CCCccCCCC
Q psy9568 24 KCLNGGKCVQKDTCECQKGFYGLRCEFC-----------ICT-----EKCLNGGKCVQKDTCECQ------KGFYGLRCE 81 (248)
Q Consensus 24 ~C~~~g~C~~~~~C~C~~G~~G~~C~~~-----------~c~-----~~C~~~g~C~~~~~C~C~------~g~~G~~C~ 81 (248)
.|+++|.|.. +.|.|++||+|..|+.. .|. .+|.++|+|+. ++|.|. +||+|..|+
T Consensus 436 ~Cs~~G~C~~-g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-G~C~C~~~~~~~~G~~G~~Ce 513 (687)
T 3k6s_B 436 LCHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCE 513 (687)
T ss_dssp TGGGSEEESS-SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-TEEEECCCCSTTCCEESTTSC
T ss_pred CCCCCCEEeC-CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-CEEEcCCCCCCCCCccccccc
Confidence 5777888885 89999999999999821 253 24899999995 899999 999999998
Q ss_pred --cCCCC----CCCCC--CceecCCCceeCCCCcccCCCCcc--CCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCCCC
Q psy9568 82 --FSKCI----IPCLN--GGRCKGVNKCRCPPGFLGDYCEIW--QRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDYCE 151 (248)
Q Consensus 82 --~~~C~----~~C~~--~g~C~~~~~C~C~~g~~g~~C~~~--~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~C~ 151 (248)
...|. .+|.+ +|.|.. ++|.|.+||+|..|+.. ...+...-..+|.++|.|.. ++|.|.+||+|..|+
T Consensus 514 ~~~~~C~~~~~~~C~~~~~G~C~~-g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-g~C~C~~Gy~G~~Ce 591 (687)
T 3k6s_B 514 CDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC-NVCECHSGYQLPLCQ 591 (687)
T ss_dssp EESSCSCEETTEETSHHHHEEEET-TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-SCBCCSTTCCTTTTC
T ss_pred cccccccCCCCcCcCCCCCCeEEC-CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-CEEECCCCCcCCCCC
Confidence 55676 35888 899984 79999999999999832 12221111137999999987 899999999999998
Q ss_pred cCCCCCCCCCCCCC-CccCCCCeeecCCCCcc---CCCCCC
Q psy9568 152 IWQRPYICPKPCKQ-GVCSAARTCACYEGWFG---RTCSQR 188 (248)
Q Consensus 152 ~~~~~~~c~~~C~~-g~C~~~~~C~C~~g~~G---~~C~~~ 188 (248)
.. ..|+.+|.+ +.|+ .|...++| ..|+..
T Consensus 592 ~c---~~C~~~C~~~g~Cv-----~C~~~~~G~~~~~C~~~ 624 (687)
T 3k6s_B 592 EC---PGCPSPCGKYISCA-----ECLKFEKGPFGKNCSAA 624 (687)
T ss_dssp CC---TTSCCCCTTTHHHH-----TTTTSCSCCCSSCSSSS
T ss_pred CC---CCCCcccCCCCCCC-----cccCCCCCCCCcccccc
Confidence 62 357788877 7776 35444555 445433
No 7
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.62 E-value=8.5e-16 Score=114.23 Aligned_cols=104 Identities=35% Similarity=0.792 Sum_probs=68.7
Q ss_pred CCCCCCceec---CCCceeCCCCcccCCCCccCCCCCCCCCCCCCCCceee---CCCeeeCCCCCCCCCCCcCCCCCCC-
Q psy9568 87 IPCLNGGRCK---GVNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCK---GVNKCRCPPGFLGDYCEIWQRPYIC- 159 (248)
Q Consensus 87 ~~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~~~~~c- 159 (248)
.+|.++|+|+ +.|.|.|++||+|..|+.....+.. .+|.+++.|+ +.|+|.|++||+|..|+..+ +.|
T Consensus 13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~--~~C~ 87 (135)
T 2vj3_A 13 NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVS---NPCQNDATCLDQIGEFQCICMPGYEGVHCEVNT--DECA 87 (135)
T ss_dssp CSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTT---CCCCSSCEEEECSSCEEEECCTTEESSSSCEEC--CTTT
T ss_pred CCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCC---CCCCCCCEEeCCCCCceeeCCCCCcCCcceecC--Cccc
Confidence 4577777776 4467778888887777654433322 4677777776 34678888888888876532 344
Q ss_pred CCCCCC-CccC---CCCeeecCCCCccCCCCCCCCCCCCC
Q psy9568 160 PKPCKQ-GVCS---AARTCACYEGWFGRTCSQRSDSGEDK 195 (248)
Q Consensus 160 ~~~C~~-g~C~---~~~~C~C~~g~~G~~C~~~~~~~~~~ 195 (248)
..+|.+ |+|+ ++|+|.|++||+|..|+.+++++...
T Consensus 88 ~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~~~ 127 (135)
T 2vj3_A 88 SSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDA 127 (135)
T ss_dssp TCCSTTTCEEEECSSCEEEECCTTEESSSSCEECC-----
T ss_pred CCCcCCCCEeECCCCCeEEECCCCCcCCccCccCccccCC
Confidence 567765 7776 57788888888888888777777654
No 8
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.58 E-value=4.2e-15 Score=136.71 Aligned_cols=129 Identities=29% Similarity=0.716 Sum_probs=99.2
Q ss_pred CCCCCCeecC------CCceeeCCCCccCCCCcC----------CCC-----CCCCCCceecCCCceeCC----CCcccC
Q psy9568 56 KCLNGGKCVQ------KDTCECQKGFYGLRCEFS----------KCI-----IPCLNGGRCKGVNKCRCP----PGFLGD 110 (248)
Q Consensus 56 ~C~~~g~C~~------~~~C~C~~g~~G~~C~~~----------~C~-----~~C~~~g~C~~~~~C~C~----~g~~g~ 110 (248)
+|.+++.|.+ .+.|.|.+||.|..|+.+ .|. .+|.++|+|. .+.|.|. +||+|.
T Consensus 441 pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~g~C~C~~~~~~Gy~G~ 519 (690)
T 3fcs_B 441 AEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL-CGQCVCHSSDFGKITGK 519 (690)
T ss_dssp CCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC-SSSEEECCCSSCCCBST
T ss_pred CCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE-CCeeEeecCCCCCeeCC
Confidence 4555555542 467999999999999753 375 2499999998 4899999 999999
Q ss_pred CCCccCCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCCCCcCCCCCCCC----CCCCC-CccCCCCeeec-CCCCccCC
Q psy9568 111 YCEIWQRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYICP----KPCKQ-GVCSAARTCAC-YEGWFGRT 184 (248)
Q Consensus 111 ~C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~c~----~~C~~-g~C~~~~~C~C-~~g~~G~~ 184 (248)
.|+.....+......+|.++|.|.. +.|.|.+||+|..|+...+...|. .+|.+ |.|. .++|.| .+||+|..
T Consensus 520 ~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~-~g~C~C~~~Gy~G~~ 597 (690)
T 3fcs_B 520 YCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCE-CGSCVCIQPGSYGDT 597 (690)
T ss_dssp TSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEE-TTEEECCSTTCBSTT
T ss_pred CcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEe-CCEEECCCCCccCCC
Confidence 9986444333221247999999987 899999999999998333345663 56876 8997 479999 99999999
Q ss_pred CCC
Q psy9568 185 CSQ 187 (248)
Q Consensus 185 C~~ 187 (248)
|+.
T Consensus 598 Ce~ 600 (690)
T 3fcs_B 598 CEK 600 (690)
T ss_dssp SCB
T ss_pred cCc
Confidence 986
No 9
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.57 E-value=6.2e-15 Score=129.15 Aligned_cols=144 Identities=29% Similarity=0.699 Sum_probs=99.0
Q ss_pred ceeeCCCCcCCCCCcCCCCCCCCCCCeecC-CCceeeCCCCccCCCCcC------------CCC--CCCCCCceec-CCC
Q psy9568 36 TCECQKGFYGLRCEFCICTEKCLNGGKCVQ-KDTCECQKGFYGLRCEFS------------KCI--IPCLNGGRCK-GVN 99 (248)
Q Consensus 36 ~C~C~~G~~G~~C~~~~c~~~C~~~g~C~~-~~~C~C~~g~~G~~C~~~------------~C~--~~C~~~g~C~-~~~ 99 (248)
.|.|++||+|+.|+. .| .+|.++|+|.+ +++|.|++||.|..|+.. .|. .+|.+++.|. +.+
T Consensus 186 ~c~C~~g~~G~~C~~-~C-~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~ 263 (423)
T 2gy5_A 186 VRRCEAQKWGPECNH-LC-TACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPY 263 (423)
T ss_dssp ECSSCTTEESTTSCE-EC-CCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTT
T ss_pred CCcCCCCCCCCCCCC-CC-CCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCC
Confidence 488999999999985 34 37889999997 789999999999999842 222 3466677776 568
Q ss_pred ceeCCCCcccCCCCccCCC--CCCCCC--CCCCCCceeeCCCeeeCCCCCCCCCCCcCCCCCCCCCCCCCCccCCCCeee
Q psy9568 100 KCRCPPGFLGDYCEIWQRP--YISKCI--IPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYICPKPCKQGVCSAARTCA 175 (248)
Q Consensus 100 ~C~C~~g~~g~~C~~~~~~--~~~~c~--~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~c~~~C~~g~C~~~~~C~ 175 (248)
.|.|.+||.|..|+..... ....|. -+|.+++.|...+.|.|.+||+|.+|+....... .+ ........|.
T Consensus 264 ~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~C~C~~G~~G~~Ce~~~~~~~--~~---~~~~~~~~~~ 338 (423)
T 2gy5_A 264 GCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREGIPRM--TP---KIVDLPDHIE 338 (423)
T ss_dssp EEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTEEECCTTCBSTTSCBCSSCCC--CC---EECSCCSBCC
T ss_pred eEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCCceECCCCCcCCCCccCccCCc--Cc---ceecCCCeEE
Confidence 8999999999888752211 112232 1577888888666788888888888886322111 11 1111244578
Q ss_pred cCCCCccCCCC
Q psy9568 176 CYEGWFGRTCS 186 (248)
Q Consensus 176 C~~g~~G~~C~ 186 (248)
|.+||.|..|+
T Consensus 339 c~~g~~g~~C~ 349 (423)
T 2gy5_A 339 VNSGKFNPICK 349 (423)
T ss_dssp EESEEECCEEE
T ss_pred eCCCccCCccc
Confidence 88888887765
No 10
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.54 E-value=7e-15 Score=134.95 Aligned_cols=129 Identities=30% Similarity=0.663 Sum_probs=101.3
Q ss_pred CCCCCCCeecCCCceeeCCCCccCCCCcC-----------CCC-----CCCCCCceecCCCceeCC------CCcccCCC
Q psy9568 55 EKCLNGGKCVQKDTCECQKGFYGLRCEFS-----------KCI-----IPCLNGGRCKGVNKCRCP------PGFLGDYC 112 (248)
Q Consensus 55 ~~C~~~g~C~~~~~C~C~~g~~G~~C~~~-----------~C~-----~~C~~~g~C~~~~~C~C~------~g~~g~~C 112 (248)
..|.++|+|.. +.|.|.+||.|..|+.+ .|. .+|.++|.|. .++|.|. +||+|..|
T Consensus 435 ~~Cs~~G~C~~-g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~G~C~C~~~~~~~~G~~G~~C 512 (687)
T 3k6s_B 435 SLCHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLIYGQYC 512 (687)
T ss_dssp STGGGSEEESS-SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-TTEEEECCCCSTTCCEESTTS
T ss_pred CCCCCCCEEeC-CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-CCEEEcCCCCCCCCCcccccc
Confidence 46888999985 89999999999999831 365 2489999999 4799999 99999999
Q ss_pred CccCCCCCCCCCCCCCC--CceeeCCCeeeCCCCCCCCCCCcCCCCCCCC----CCCCC-CccCCCCeeecCCCCccCCC
Q psy9568 113 EIWQRPYISKCIIPCLN--GGRCKGVNKCRCPPGFLGDYCEIWQRPYICP----KPCKQ-GVCSAARTCACYEGWFGRTC 185 (248)
Q Consensus 113 ~~~~~~~~~~c~~~C~~--~g~C~~~~~C~C~~g~~g~~C~~~~~~~~c~----~~C~~-g~C~~~~~C~C~~g~~G~~C 185 (248)
+.....+...-..+|.+ +|.|.. ++|.|.+||+|..|+...+...|. .+|.+ |.|.. ++|.|.+||+|..|
T Consensus 513 e~~~~~C~~~~~~~C~~~~~G~C~~-g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-g~C~C~~Gy~G~~C 590 (687)
T 3k6s_B 513 ECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC-NVCECHSGYQLPLC 590 (687)
T ss_dssp CEESSCSCEETTEETSHHHHEEEET-TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-SCBCCSTTCCTTTT
T ss_pred ccccccccCCCCcCcCCCCCCeEEC-CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-CEEECCCCCcCCCC
Confidence 85443332111135888 899985 799999999999999543345563 26876 88984 89999999999999
Q ss_pred CC
Q psy9568 186 SQ 187 (248)
Q Consensus 186 ~~ 187 (248)
++
T Consensus 591 e~ 592 (687)
T 3k6s_B 591 QE 592 (687)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 11
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.54 E-value=2.3e-14 Score=106.49 Aligned_cols=97 Identities=37% Similarity=1.037 Sum_probs=53.1
Q ss_pred cCCCC---cCCCCCCEeecC---CceeeCCCCcCCCCCc--CCCC-CCCCCCCeecC---CCceeeCCCCccCCCC--cC
Q psy9568 18 SGICT---EKCLNGGKCVQK---DTCECQKGFYGLRCEF--CICT-EKCLNGGKCVQ---KDTCECQKGFYGLRCE--FS 83 (248)
Q Consensus 18 ~~~C~---~~C~~~g~C~~~---~~C~C~~G~~G~~C~~--~~c~-~~C~~~g~C~~---~~~C~C~~g~~G~~C~--~~ 83 (248)
.+.|. ++|.++|+|++. +.|.|++||+|..|+. ..|. .+|.++++|++ .++|.|++||.|..|+ ++
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~ 84 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTD 84 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECC
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCC
Confidence 35554 367777777653 4677777777766652 2242 34655566654 2356666666665554 23
Q ss_pred CCC-CCCCCCceec---CCCceeCCCCcccCCCCc
Q psy9568 84 KCI-IPCLNGGRCK---GVNKCRCPPGFLGDYCEI 114 (248)
Q Consensus 84 ~C~-~~C~~~g~C~---~~~~C~C~~g~~g~~C~~ 114 (248)
+|. .+|.++++|+ +.|+|.|++||+|..|+.
T Consensus 85 ~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 85 ECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQV 119 (135)
T ss_dssp TTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCE
T ss_pred cccCCCcCCCCEeECCCCCeEEECCCCCcCCccCc
Confidence 443 4455555554 334555555555555543
No 12
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.53 E-value=3.8e-16 Score=122.44 Aligned_cols=73 Identities=30% Similarity=0.658 Sum_probs=36.8
Q ss_pred cCCCCCCEeecC---CceeeCCCCcCC---CCC-cCCCC-----CCCCCCCeecCC--------CceeeCCCCccCCC--
Q psy9568 23 EKCLNGGKCVQK---DTCECQKGFYGL---RCE-FCICT-----EKCLNGGKCVQK--------DTCECQKGFYGLRC-- 80 (248)
Q Consensus 23 ~~C~~~g~C~~~---~~C~C~~G~~G~---~C~-~~~c~-----~~C~~~g~C~~~--------~~C~C~~g~~G~~C-- 80 (248)
++|.+ |+|++. +.|.|++||+|. .|+ +..|. .+|.++++|++. ++|.|++||.|..+
T Consensus 11 ~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C 89 (186)
T 1z1y_A 11 TICXN-GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTC 89 (186)
T ss_dssp CCCBT-EEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEE
T ss_pred CCCCC-CEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCC
Confidence 35653 477652 567777777765 453 23343 235555566542 24555555555422
Q ss_pred CcCCCC-CCCCCCceec
Q psy9568 81 EFSKCI-IPCLNGGRCK 96 (248)
Q Consensus 81 ~~~~C~-~~C~~~g~C~ 96 (248)
++++|. .+|.+++.|+
T Consensus 90 ~~d~C~~~~C~~~g~C~ 106 (186)
T 1z1y_A 90 VLDVCQYXNCGESGECI 106 (186)
T ss_dssp EEGGGTTCCCCTTEEEE
T ss_pred CCCcCcCCCCCCCCEEe
Confidence 233443 3344444443
No 13
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.50 E-value=1.1e-15 Score=119.87 Aligned_cols=129 Identities=26% Similarity=0.580 Sum_probs=98.5
Q ss_pred CCCCCCCCeecC---CCceeeCCCCccC---CCC-cCCCC-----CCCCCCceec--------CCCceeCCCCcccCCCC
Q psy9568 54 TEKCLNGGKCVQ---KDTCECQKGFYGL---RCE-FSKCI-----IPCLNGGRCK--------GVNKCRCPPGFLGDYCE 113 (248)
Q Consensus 54 ~~~C~~~g~C~~---~~~C~C~~g~~G~---~C~-~~~C~-----~~C~~~g~C~--------~~~~C~C~~g~~g~~C~ 113 (248)
..+|.+ |+|++ .++|.|++||.|. .|+ +++|. .+|.+++.|+ +.|.|.|++||+|..++
T Consensus 10 ~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~ 88 (186)
T 1z1y_A 10 DTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT 88 (186)
T ss_dssp TCCCBT-EEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE
T ss_pred CCCCCC-CEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC
Confidence 357874 59987 5699999999987 774 57786 4598889997 25689999999998654
Q ss_pred ccCCCCCCCCC-CCCCCCceee-------CCCeeeCCCCCCC-----CCCCcCCCCCCCCCCC-CC-CccC---CCCeee
Q psy9568 114 IWQRPYISKCI-IPCLNGGRCK-------GVNKCRCPPGFLG-----DYCEIWQRPYICPKPC-KQ-GVCS---AARTCA 175 (248)
Q Consensus 114 ~~~~~~~~~c~-~~C~~~g~C~-------~~~~C~C~~g~~g-----~~C~~~~~~~~c~~~C-~~-g~C~---~~~~C~ 175 (248)
-.. ++|. .+|.+++.|+ +.|+|.|++||+| ..|+.. +.++|..+| .+ ++|+ ++|+|.
T Consensus 89 C~~----d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~-~~~~C~~~C~~~~~~C~n~~g~y~C~ 163 (186)
T 1z1y_A 89 CVL----DVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT-GETACQLXCNTDNEVCXNVEGVYXCQ 163 (186)
T ss_dssp EEE----GGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE-ECCCCCCCCCTTTEEEEEETTEEEEE
T ss_pred CCC----CcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc-CCCcccccccccCcceecCCCCeeeE
Confidence 322 2332 4788889997 2479999999998 667642 235676789 65 8897 788999
Q ss_pred cCCCCccCCCCCC
Q psy9568 176 CYEGWFGRTCSQR 188 (248)
Q Consensus 176 C~~g~~G~~C~~~ 188 (248)
|++||+|..++..
T Consensus 164 C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 164 CMEGFTFDXEXNV 176 (186)
T ss_dssp ECTTCEEETTTTE
T ss_pred CCCCCccCccccc
Confidence 9999999988654
No 14
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.48 E-value=1.4e-13 Score=120.56 Aligned_cols=154 Identities=27% Similarity=0.591 Sum_probs=105.8
Q ss_pred CCCCc---CCCCCCEeec-CCceeeCCCCcCCCCCcC------------CC--CCCCCCCCeecC-CCceeeCCCCccCC
Q psy9568 19 GICTE---KCLNGGKCVQ-KDTCECQKGFYGLRCEFC------------IC--TEKCLNGGKCVQ-KDTCECQKGFYGLR 79 (248)
Q Consensus 19 ~~C~~---~C~~~g~C~~-~~~C~C~~G~~G~~C~~~------------~c--~~~C~~~g~C~~-~~~C~C~~g~~G~~ 79 (248)
+.|.. +|.++|.|++ ++.|.|++||+|..|+.. .| ...|.+++.|.. +++|.|.+||.|..
T Consensus 196 ~~C~~~C~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~ 275 (423)
T 2gy5_A 196 PECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQ 275 (423)
T ss_dssp TTSCEECCCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGG
T ss_pred CCCCCCCCCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCccccc
Confidence 44544 7889999996 689999999999999842 12 235777788864 68999999999999
Q ss_pred CCc--------CCCC--CCCCCCceecCCCceeCCCCcccCCCCccCCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCC
Q psy9568 80 CEF--------SKCI--IPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDY 149 (248)
Q Consensus 80 C~~--------~~C~--~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~ 149 (248)
|+. +.|. .+|.++|.|...+.|.|.+||+|..|+........ + ........|.|.+||.|..
T Consensus 276 C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~C~C~~G~~G~~Ce~~~~~~~~----~----~~~~~~~~~~c~~g~~g~~ 347 (423)
T 2gy5_A 276 CNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREGIPRMT----P----KIVDLPDHIEVNSGKFNPI 347 (423)
T ss_dssp GCBCCCTTBCSBTTCCBCCCTTCCEEETTTEEECCTTCBSTTSCBCSSCCCC----C----EECSCCSBCCEESEEECCE
T ss_pred ccCccCCCCcCCcccccccCCCCCEecCCCceECCCCCcCCCCccCccCCcC----c----ceecCCCeEEeCCCccCCc
Confidence 974 2333 26899999997677999999999999975322111 1 1111234678899999988
Q ss_pred CCcCCCCCCCCCCCCCCc--cCCCCeeecCCCCccCC
Q psy9568 150 CEIWQRPYICPKPCKQGV--CSAARTCACYEGWFGRT 184 (248)
Q Consensus 150 C~~~~~~~~c~~~C~~g~--C~~~~~C~C~~g~~G~~ 184 (248)
|+.. .++.+-.... +...+.|.+..++.+.+
T Consensus 348 C~~~----~~~~~~~~~~~~~~~~G~cl~~~~~~~~d 380 (423)
T 2gy5_A 348 CKAS----GWPLPTNEEMTLVKPDGTVLHPKDFNHTD 380 (423)
T ss_dssp EEEE----CTTCCCGGGEEEECTTSCEECCSEEEECS
T ss_pred cccc----CCcCCCCceEEEECCCeEEEeCCCcCccc
Confidence 8752 2222111111 23467788887776644
No 15
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.48 E-value=9.8e-14 Score=103.98 Aligned_cols=63 Identities=40% Similarity=0.977 Sum_probs=46.6
Q ss_pred CCCCCCceee----------CCCeeeCCCCCCCCCCCcCCCCCCC-CCCCCC-CccC---CCCeeecCCCCccCCCCCCC
Q psy9568 125 IPCLNGGRCK----------GVNKCRCPPGFLGDYCEIWQRPYIC-PKPCKQ-GVCS---AARTCACYEGWFGRTCSQRS 189 (248)
Q Consensus 125 ~~C~~~g~C~----------~~~~C~C~~g~~g~~C~~~~~~~~c-~~~C~~-g~C~---~~~~C~C~~g~~G~~C~~~~ 189 (248)
.+|.+++.|+ +.+.|.|++||+|..|+..+ ++| ..+|.+ ++|+ ++|+|.|++||+|..|+...
T Consensus 58 ~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i--~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 58 NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNI--NECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp CCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEEC--CTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC-
T ss_pred CCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCC--CcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceecC
Confidence 4677777876 35788899999888887433 345 567876 7886 67789999999998887543
No 16
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.46 E-value=2.4e-13 Score=101.87 Aligned_cols=109 Identities=34% Similarity=0.797 Sum_probs=69.5
Q ss_pred cCCCCCCEeec-----CCceeeCCCCcCCCCCcCCCCCCCCCCCeecCCCceeeCCCCccCCCCcCCCC-CCCCCCceec
Q psy9568 23 EKCLNGGKCVQ-----KDTCECQKGFYGLRCEFCICTEKCLNGGKCVQKDTCECQKGFYGLRCEFSKCI-IPCLNGGRCK 96 (248)
Q Consensus 23 ~~C~~~g~C~~-----~~~C~C~~G~~G~~C~~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~C~-~~C~~~g~C~ 96 (248)
++|.++|+|++ .+.|.|++||+|..|+..... ......|. +++.|. .+|.+++.|+
T Consensus 6 ~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~--~~~~~~c~----------------~~~~C~~~~C~~~g~C~ 67 (143)
T 4d90_A 6 NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEV--ASDEEEPT----------------SAGPCTPNPCHNGGTCE 67 (143)
T ss_dssp CCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCC--TTTTTSCC----------------CCCTTSSCCCCTTCEEE
T ss_pred CcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccc--cccccccc----------------cCCcCCCCCCCCCCEec
Confidence 37888889975 257999999999888742210 00000000 122343 4577777775
Q ss_pred ----------CCCceeCCCCcccCCCCccCCCCCCCCCCCCCCCceee---CCCeeeCCCCCCCCCCCc
Q psy9568 97 ----------GVNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCK---GVNKCRCPPGFLGDYCEI 152 (248)
Q Consensus 97 ----------~~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~---~~~~C~C~~g~~g~~C~~ 152 (248)
+.|.|.|++||.|..|+...+.+. ..+|.+++.|+ +.|+|.|++||+|.+|+.
T Consensus 68 ~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~---~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 68 ISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECE---VEPCKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp ECCCEETTEECCEEEECCTTEESTTSCEECCTTT---TCCSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CCCccccCCCCCeEeECcCCCcCCCcccCCCcCC---CCCCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 357788888888888875443332 24677888886 446788888888888775
No 17
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.40 E-value=1.6e-13 Score=109.31 Aligned_cols=64 Identities=34% Similarity=0.679 Sum_probs=36.8
Q ss_pred CCCCCCceecCCCceeCCCC------cccCCCCccCCCCCCCCCCCCCCC--ceeeCCCeeeCCCCCCCCCCCc
Q psy9568 87 IPCLNGGRCKGVNKCRCPPG------FLGDYCEIWQRPYISKCIIPCLNG--GRCKGVNKCRCPPGFLGDYCEI 152 (248)
Q Consensus 87 ~~C~~~g~C~~~~~C~C~~g------~~g~~C~~~~~~~~~~c~~~C~~~--g~C~~~~~C~C~~g~~g~~C~~ 152 (248)
.+|.++|+|+. +.|.|.+| |+|..|+.....+......+|.++ |+|.. +.|.|.+||+|..|+.
T Consensus 143 ~~Csg~G~C~~-g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~-g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 143 IICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQH 214 (217)
T ss_dssp CBGGGTEEEET-TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET-TEEEECTTEESTTSCE
T ss_pred CCCCCCCEEeC-CceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC-CeeECCCCCccCCcCC
Confidence 34666666663 56777776 466666643322221111246666 77764 5777777777777764
No 18
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.39 E-value=2.7e-13 Score=101.63 Aligned_cols=63 Identities=25% Similarity=0.665 Sum_probs=45.4
Q ss_pred cCCCCcCCCCCCEeecCCceeeCCCCcC---------CCCC-cCCCCC----CCCCCCeecC---CCceeeCCCCccCCC
Q psy9568 18 SGICTEKCLNGGKCVQKDTCECQKGFYG---------LRCE-FCICTE----KCLNGGKCVQ---KDTCECQKGFYGLRC 80 (248)
Q Consensus 18 ~~~C~~~C~~~g~C~~~~~C~C~~G~~G---------~~C~-~~~c~~----~C~~~g~C~~---~~~C~C~~g~~G~~C 80 (248)
...|+++|.++|.|++.+.|.|++||+| ..|. +..|.. +|.++++|++ .++|.|++||.|..+
T Consensus 2 ~~~C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 2 SRGCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp -CCCCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred CCCCcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 3568889999999998889999999987 4563 334532 5777777775 457777777777644
No 19
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.35 E-value=3.9e-16 Score=127.00 Aligned_cols=150 Identities=17% Similarity=0.076 Sum_probs=102.7
Q ss_pred cCCCCCCEeec---CCceeeCCCCcCCCCCcCC--C-------CCCCCCCCeecCCCceeeCCCCccCCCCc-CCCC-CC
Q psy9568 23 EKCLNGGKCVQ---KDTCECQKGFYGLRCEFCI--C-------TEKCLNGGKCVQKDTCECQKGFYGLRCEF-SKCI-IP 88 (248)
Q Consensus 23 ~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~--c-------~~~C~~~g~C~~~~~C~C~~g~~G~~C~~-~~C~-~~ 88 (248)
.+|.++|.|++ +|.|.|++||+|..|++.+ | ..+|+++++| |.|..|+. .+|. .|
T Consensus 38 ~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc-----------~~G~~c~~~~eC~s~p 106 (267)
T 4fbr_A 38 IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVW-----------VLGARDKQNIVAVSIK 106 (267)
T ss_dssp EECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEE-----------ECCCCSSCCEEEEEEE
T ss_pred CCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCee-----------eccCccccccccCCCC
Confidence 37889999986 4899999999999998543 2 2345444443 35667753 3555 78
Q ss_pred CCCCceec---CCCceeCCCCcccCCCCccCCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCCCCcCCCCCCCCCCCCC
Q psy9568 89 CLNGGRCK---GVNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYICPKPCKQ 165 (248)
Q Consensus 89 C~~~g~C~---~~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~c~~~C~~ 165 (248)
|.++|+|+ .+|+|.|+.||+|..|+.....+.. .++.+.+.|.. +...+.|.+|+..+ +.+..+|.+
T Consensus 107 C~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n---~~~c~s~pC~n-----gg~c~~G~~c~~~i--~c~~~~c~n 176 (267)
T 4fbr_A 107 SNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVEN---QWGGSAAPWHS-----GGVWVLGTRGKQNV--INVDAKSND 176 (267)
T ss_dssp CSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEE---ECSSTTSCCEE-----EEEEECCSSTTSCE--EEEEEECSS
T ss_pred CCCCCEEecCCccEEeeCCCCccccCCCCCcccccc---cCCcCCccccC-----Ccceeccccccccc--ccCCCCCCC
Confidence 99999998 5699999999999999876533211 12222222221 11123466776632 233667776
Q ss_pred -CccC---CCCeeecCCCCccCCCCCCCCCCC
Q psy9568 166 -GVCS---AARTCACYEGWFGRTCSQRSDSGE 193 (248)
Q Consensus 166 -g~C~---~~~~C~C~~g~~G~~C~~~~~~~~ 193 (248)
|+|+ .+|+|.|++||+|..|+..++++.
T Consensus 177 gg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~ 208 (267)
T 4fbr_A 177 GGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVE 208 (267)
T ss_dssp TTSEEEEEEEETTSCCEEEEEEEEETTEEEEE
T ss_pred CCEeeCCCCCeEEeCCCCccccccccccceec
Confidence 8888 789999999999999998888743
No 20
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.27 E-value=5.3e-12 Score=94.52 Aligned_cols=61 Identities=28% Similarity=0.769 Sum_probs=47.9
Q ss_pred CCCCCCCCCeecCCCceeeCCCCcc---------CCCC-cCCCCC----CCCCCceec---CCCceeCCCCcccCCCC
Q psy9568 53 CTEKCLNGGKCVQKDTCECQKGFYG---------LRCE-FSKCII----PCLNGGRCK---GVNKCRCPPGFLGDYCE 113 (248)
Q Consensus 53 c~~~C~~~g~C~~~~~C~C~~g~~G---------~~C~-~~~C~~----~C~~~g~C~---~~~~C~C~~g~~g~~C~ 113 (248)
|..+|.++++|++.++|.|++||.| ..|+ +++|.. +|.+++.|+ +.|.|.|++||+|..++
T Consensus 5 C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 5 CARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp CCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 5678999999999899999999998 4663 567762 688888887 55788888888887544
No 21
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.17 E-value=2.6e-11 Score=83.48 Aligned_cols=20 Identities=30% Similarity=0.820 Sum_probs=9.9
Q ss_pred CCeeecCCCCccCCCCCCCC
Q psy9568 171 ARTCACYEGWFGRTCSQRSD 190 (248)
Q Consensus 171 ~~~C~C~~g~~G~~C~~~~~ 190 (248)
.|+|.|++||+|..|+++++
T Consensus 70 ~~~C~C~~G~~G~~Ce~~id 89 (91)
T 1tpg_A 70 DFVCQCPEGFAGKSCEIDTR 89 (91)
T ss_dssp CEEEECCTTCBSSSCCBCSS
T ss_pred CeEeECCCCCcCCcCCcCCC
Confidence 34455555555555544443
No 22
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.15 E-value=3e-11 Score=83.16 Aligned_cols=74 Identities=27% Similarity=0.618 Sum_probs=31.9
Q ss_pred CceeeCCCCcCCCCCcCCCC-CCCCCCCeecCCCceeeCCCCccCCCC---cCCCC-CCCCCCceec-----CCCceeCC
Q psy9568 35 DTCECQKGFYGLRCEFCICT-EKCLNGGKCVQKDTCECQKGFYGLRCE---FSKCI-IPCLNGGRCK-----GVNKCRCP 104 (248)
Q Consensus 35 ~~C~C~~G~~G~~C~~~~c~-~~C~~~g~C~~~~~C~C~~g~~G~~C~---~~~C~-~~C~~~g~C~-----~~~~C~C~ 104 (248)
|.|.|.+||+|..|++..|. .+|.++ ...++|.|++||. .|+ +++|. .||.++|+|+ +.|.|.|+
T Consensus 2 y~C~C~~g~~g~~c~~~~c~~~pC~n~---~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~ 76 (91)
T 1tpg_A 2 YQVICRDEKTQMIYQQHQSWLRPVLRS---NRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCP 76 (91)
T ss_dssp CCCCCBCSSSCCBCCSSCEEEEECSSS---SCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECC
T ss_pred eeeECCCCCcCCeECCCcccCCccccC---CCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECC
Confidence 44555555555555443331 223221 1123455555554 443 23343 3444444443 23344444
Q ss_pred CCcccCCCC
Q psy9568 105 PGFLGDYCE 113 (248)
Q Consensus 105 ~g~~g~~C~ 113 (248)
+||+|..|+
T Consensus 77 ~G~~G~~Ce 85 (91)
T 1tpg_A 77 EGFAGKSCE 85 (91)
T ss_dssp TTCBSSSCC
T ss_pred CCCcCCcCC
Confidence 444444444
No 23
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.13 E-value=3.4e-11 Score=95.93 Aligned_cols=106 Identities=27% Similarity=0.628 Sum_probs=69.6
Q ss_pred CCCCCCCeecCCCceeeCCCCccCCCCcCCCCCCCCCCceecCCCceeCCCCcccCCCCccCCCCCCCCCCCCCCCceee
Q psy9568 55 EKCLNGGKCVQKDTCECQKGFYGLRCEFSKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCK 134 (248)
Q Consensus 55 ~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~ 134 (248)
..|+++|+|+. +.|.|.+||+|..|+.+.-. ... . + .+..|... ....+|+++|.|+
T Consensus 96 ~~Csg~G~C~~-g~C~C~~G~~G~~Cec~~~~--~~~--------~--~----~~~~C~~~------~~~~~Csg~G~C~ 152 (217)
T 2p28_B 96 SLCHGKGFLEC-GICRCDTGYIGKNCECQTQG--RSS--------Q--E----LEGSCRKD------NNSIICSGLGDCV 152 (217)
T ss_dssp CTTTTSEEEET-TEEEECTTEESTTSCEECCC--CC---------G--G----GGGGGBSS------TTSCBGGGTEEEE
T ss_pred CccCCCceEEC-CEEECCCCccCCcccccCcc--ccc--------c--c----CCCcCCCC------CCCCCCCCCCEEe
Confidence 45778888885 78888888888888732100 000 0 0 01122210 0124788899998
Q ss_pred CCCeeeCCCC------CCCCCCCcCCCCCCCCC----CCC-C--CccCCCCeeecCCCCccCCCCC
Q psy9568 135 GVNKCRCPPG------FLGDYCEIWQRPYICPK----PCK-Q--GVCSAARTCACYEGWFGRTCSQ 187 (248)
Q Consensus 135 ~~~~C~C~~g------~~g~~C~~~~~~~~c~~----~C~-~--g~C~~~~~C~C~~g~~G~~C~~ 187 (248)
. +.|.|.+| |+|..|+... ..|+. +|. + |+|. .++|.|.+||+|..|+.
T Consensus 153 ~-g~C~C~~gw~~~~~~~G~~Ce~~~--~~C~~~~g~~C~~~~~G~C~-~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 153 C-GQCLCHTSDVPGKLIYGQYCECDT--INCERYNGQVCGGPGRGLCF-CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp T-TEEEECCCCSTTCCEESTTSCEES--SCSCEETTEETTCTTTEEEE-TTEEEECTTEESTTSCE
T ss_pred C-CceECCCCCCCcccEECCCcccCC--ccCCCCCCCCCCCCCCcEEe-CCeeECCCCCccCCcCC
Confidence 5 78999999 5899998532 34533 475 3 8888 57999999999999975
No 24
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.05 E-value=3.1e-10 Score=103.27 Aligned_cols=63 Identities=29% Similarity=0.718 Sum_probs=38.7
Q ss_pred CCCCc-CCCCCCEeecC----Cce-eeCCCCcC--CCCC-cCCCC-CC--CCCCC---eecC---CCcee-eCCCCccCC
Q psy9568 19 GICTE-KCLNGGKCVQK----DTC-ECQKGFYG--LRCE-FCICT-EK--CLNGG---KCVQ---KDTCE-CQKGFYGLR 79 (248)
Q Consensus 19 ~~C~~-~C~~~g~C~~~----~~C-~C~~G~~G--~~C~-~~~c~-~~--C~~~g---~C~~---~~~C~-C~~g~~G~~ 79 (248)
..|.. +|.+++.|++. |.| .|++||+| ..|+ +.+|. .+ |.+++ +|++ .|+|. |++||.|..
T Consensus 4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~ 83 (634)
T 1yo8_A 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQ 83 (634)
T ss_dssp CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECC
T ss_pred cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCc
Confidence 34543 78777888752 568 78888876 6675 33353 23 66666 6665 34666 666666665
Q ss_pred CC
Q psy9568 80 CE 81 (248)
Q Consensus 80 C~ 81 (248)
|+
T Consensus 84 c~ 85 (634)
T 1yo8_A 84 PV 85 (634)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 25
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.04 E-value=3e-13 Score=110.09 Aligned_cols=142 Identities=15% Similarity=0.037 Sum_probs=79.2
Q ss_pred CCCCCCEeec---CCceeeCCCCcCCCCCcCC--CC-CCCCCCCeecCCCceeeCCCCccCCCCcCC--CCCCCCCCcee
Q psy9568 24 KCLNGGKCVQ---KDTCECQKGFYGLRCEFCI--CT-EKCLNGGKCVQKDTCECQKGFYGLRCEFSK--CIIPCLNGGRC 95 (248)
Q Consensus 24 ~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~--c~-~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~--C~~~C~~~g~C 95 (248)
+|.++|+|++ +|+|.|++||+|..|+..+ |. .++...+.|.+.++| +.|.+|+... +..+|.++|+|
T Consensus 106 pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c-----~~G~~c~~~i~c~~~~c~ngg~C 180 (267)
T 4fbr_A 106 KSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVW-----VLGTRGKQNVINVDAKSNDGGKT 180 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEE-----ECCSSTTSCEEEEEEECSSTTSE
T ss_pred CCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcce-----ecccccccccccCCCCCCCCCEe
Confidence 6777777764 3677777777777776432 11 111111222221111 2355554321 22568888888
Q ss_pred c---CCCceeCCCCcccCCCCccCCCCCCC--CC-CCCCCCceeeCCCeeeCCCCCCCCCCCcCCCCCCCCCCCCC-Ccc
Q psy9568 96 K---GVNKCRCPPGFLGDYCEIWQRPYISK--CI-IPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYICPKPCKQ-GVC 168 (248)
Q Consensus 96 ~---~~~~C~C~~g~~g~~C~~~~~~~~~~--c~-~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~c~~~C~~-g~C 168 (248)
+ .+|+|.|++||+|..|+..+...... +. .+|.+++. +.+.|..++....++ .+|.+ |+|
T Consensus 181 ~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~----~~~~C~~g~n~~~c~---------~~c~ngGtC 247 (267)
T 4fbr_A 181 LSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGF----WMIGARNGQNVVALN---------VASSDGGKT 247 (267)
T ss_dssp EEEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEE----EECCCCTTCCEEEEE---------EECSSTTSE
T ss_pred eCCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCCe----EEEecCCCCccccCC---------cCCCCCCEe
Confidence 7 45788888888888887654321110 10 12333222 233466665444443 35555 788
Q ss_pred C---CCCeeecCCCCccC
Q psy9568 169 S---AARTCACYEGWFGR 183 (248)
Q Consensus 169 ~---~~~~C~C~~g~~G~ 183 (248)
+ .+|+|.|++||+|.
T Consensus 248 ~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 248 LAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp EEEEEEETTSCCEEEEEE
T ss_pred eCCCcceeecCCCCcccc
Confidence 7 68999999999984
No 26
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.01 E-value=4.6e-11 Score=105.95 Aligned_cols=77 Identities=35% Similarity=0.766 Sum_probs=35.4
Q ss_pred eeeCCCCcCCCCCcCCCCCCCCCCCeecCCCceeeCCCCccCCCCcCCCCCCCCCCceecCCCceeCCCCcccCCCCc
Q psy9568 37 CECQKGFYGLRCEFCICTEKCLNGGKCVQKDTCECQKGFYGLRCEFSKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEI 114 (248)
Q Consensus 37 C~C~~G~~G~~C~~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~g~~g~~C~~ 114 (248)
..|..+|.|..|....|..+|.+ |+|+..++|.|.+||.|..|+.+.|..+|.++|+|+..+.|.|.+||+|..|+.
T Consensus 379 ~~C~~~~~g~~c~~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 379 EECRATVQPAQTLTSECSRLCRN-GYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp GGGCCCCCCCCCCCCHHHHHCCS-EEECTTSCEEECTTEESTTSCEECC-----------------------------
T ss_pred ccCCCCCcCCCCccccccCCCCC-CccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEECCCCEEECCCCcccCCCCC
Confidence 56777777777776666666765 777776778888888888887777777777777777667777877887777765
No 27
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.96 E-value=4.7e-10 Score=85.58 Aligned_cols=71 Identities=31% Similarity=0.757 Sum_probs=44.1
Q ss_pred CCCCCCEeecC-----Cce-eeCCCCcCCCCCcCCCCCCCCCCCeecCCCceeeCCCCccCCCCc----CCCC-CCCCCC
Q psy9568 24 KCLNGGKCVQK-----DTC-ECQKGFYGLRCEFCICTEKCLNGGKCVQKDTCECQKGFYGLRCEF----SKCI-IPCLNG 92 (248)
Q Consensus 24 ~C~~~g~C~~~-----~~C-~C~~G~~G~~C~~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~~----~~C~-~~C~~~ 92 (248)
+|.+++.|+.. +.| .|++||+|..|+ +|.+||+|..+.. ..|. ..|.++
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce--------------------~C~~g~~g~~~~~~~~~~~C~~C~C~~~ 61 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE--------------------LCDDGYFGDPLGSNGPVRLCRPCQCNDN 61 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC--------------------EECTTEEEETTCTTSSCEEEEECCSTTC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc--------------------CCCCCCcCCcccccCCCCCCeeCcCCCC
Confidence 57888999742 479 799999999997 3445555544321 1121 123332
Q ss_pred ------ceec-CCCcee-CCCCcccCCCCc
Q psy9568 93 ------GRCK-GVNKCR-CPPGFLGDYCEI 114 (248)
Q Consensus 93 ------g~C~-~~~~C~-C~~g~~g~~C~~ 114 (248)
+.|. ..++|+ |.++|+|..|+.
T Consensus 62 ~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~ 91 (162)
T 1klo_A 62 IDPNAVGNCNRLTGECLKCIYNTAGFYCDR 91 (162)
T ss_dssp BCTTCSCCBCTTTCCBCCBCTTEETTTTCE
T ss_pred CCcccCCcccCCCCcccCCCCCCcCCCcCc
Confidence 3454 346774 888888887763
No 28
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.84 E-value=2.7e-09 Score=97.05 Aligned_cols=105 Identities=28% Similarity=0.650 Sum_probs=69.7
Q ss_pred CCCCCCCeecC----CCce-eeCCCCcc--CCCC-cCCCC-CC--CCCCc---eec---CCCcee-CCCCcccCCCCcc-
Q psy9568 55 EKCLNGGKCVQ----KDTC-ECQKGFYG--LRCE-FSKCI-IP--CLNGG---RCK---GVNKCR-CPPGFLGDYCEIW- 115 (248)
Q Consensus 55 ~~C~~~g~C~~----~~~C-~C~~g~~G--~~C~-~~~C~-~~--C~~~g---~C~---~~~~C~-C~~g~~g~~C~~~- 115 (248)
.+|.++++|++ +++| .|++||+| ..|+ +++|. .+ |.+++ .|+ +.|+|. |++||+|..|+..
T Consensus 9 nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g 88 (634)
T 1yo8_A 9 NPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVG 88 (634)
T ss_dssp CCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESS
T ss_pred CCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccccc
Confidence 57888888876 2578 88888887 6785 56776 44 88877 787 557887 8888888887610
Q ss_pred ---------CCCCCCCCC---CCCCCCceee-------CCCeeeCCCCCCC--CCCCcCCCCCCC
Q psy9568 116 ---------QRPYISKCI---IPCLNGGRCK-------GVNKCRCPPGFLG--DYCEIWQRPYIC 159 (248)
Q Consensus 116 ---------~~~~~~~c~---~~C~~~g~C~-------~~~~C~C~~g~~g--~~C~~~~~~~~c 159 (248)
....+.+|. .+|.+++.|+ +.|+|.|++||+| ..|+...++++|
T Consensus 89 ~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC 153 (634)
T 1yo8_A 89 LEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGW 153 (634)
T ss_dssp SHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSS
T ss_pred ccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccccccCcccc
Confidence 112234553 3677777775 2457777777776 566644344333
No 29
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.80 E-value=6.7e-10 Score=80.20 Aligned_cols=29 Identities=28% Similarity=0.650 Sum_probs=16.1
Q ss_pred CCCCc-CCCCCCEeecC----CceeeCCCCcCCCCC
Q psy9568 19 GICTE-KCLNGGKCVQK----DTCECQKGFYGLRCE 49 (248)
Q Consensus 19 ~~C~~-~C~~~g~C~~~----~~C~C~~G~~G~~C~ 49 (248)
+.|.. +|.+ +|++. |.|.|++||+|..++
T Consensus 5 deC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~ 38 (118)
T 1dx5_I 5 DPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHE 38 (118)
T ss_dssp CGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTE
T ss_pred ccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCC
Confidence 34433 5542 66543 467777777766543
No 30
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.79 E-value=8.2e-10 Score=97.94 Aligned_cols=76 Identities=41% Similarity=0.899 Sum_probs=22.6
Q ss_pred eeCCCCccCCCCcCCCCCCCCCCceecCCCceeCCCCcccCCCCccCCCCCCCCCCCCCCCceeeCCCeeeCCCCCCCCC
Q psy9568 70 ECQKGFYGLRCEFSKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCKGVNKCRCPPGFLGDY 149 (248)
Q Consensus 70 ~C~~g~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~g~~g~~ 149 (248)
.|..+|.|..|+.+.|..+|.+ |.|...++|.|.+||+|..|+.. .|..+|.++|.|+..+.|.|.+||+|..
T Consensus 380 ~C~~~~~g~~c~~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~------~C~~~C~~~g~C~~~~~C~C~~G~~G~~ 452 (463)
T 2wg3_C 380 ECRATVQPAQTLTSECSRLCRN-GYCTPTGKCCCSPGWEGDFCRTA------KCEPACRHGGVCVRPNKCLCKKGYLGPQ 452 (463)
T ss_dssp GGCCCCCCCCCCCCHHHHHCCS-EEECTTSCEEECTTEESTTSCEE------CC--------------------------
T ss_pred cCCCCCcCCCCccccccCCCCC-CccCCCCeECCCCCcCCCcCCcC------cCCCCCCCCCEECCCCEEECCCCcccCC
Confidence 4445555555554444444544 45554445555555555555421 1223455555554434555555555555
Q ss_pred CCc
Q psy9568 150 CEI 152 (248)
Q Consensus 150 C~~ 152 (248)
|+.
T Consensus 453 C~~ 455 (463)
T 2wg3_C 453 CEQ 455 (463)
T ss_dssp ---
T ss_pred CCC
Confidence 443
No 31
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.76 E-value=2.8e-10 Score=86.84 Aligned_cols=74 Identities=27% Similarity=0.597 Sum_probs=42.3
Q ss_pred CCceeCCCCcc-cCCCCccCCCCCCCCCCCCCCCceeeCCCeeeCCC--CCCCCCCCc-CCCCCCC---CCCCCCCccC-
Q psy9568 98 VNKCRCPPGFL-GDYCEIWQRPYISKCIIPCLNGGRCKGVNKCRCPP--GFLGDYCEI-WQRPYIC---PKPCKQGVCS- 169 (248)
Q Consensus 98 ~~~C~C~~g~~-g~~C~~~~~~~~~~c~~~C~~~g~C~~~~~C~C~~--g~~g~~C~~-~~~~~~c---~~~C~~g~C~- 169 (248)
.|.|.|++||. +..|+. |.... .+.|.|.|++ ||++..-.. ..++++| +.+|.++.|+
T Consensus 74 ~~~C~C~~G~~~~~~C~~------------C~~~~--~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n 139 (162)
T 1uzk_A 74 KASCCCSLGKAWGTPCEM------------CPAVN--TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCIN 139 (162)
T ss_dssp HHHHHTTTCCEETTTTEE------------CCCTT--SHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEE
T ss_pred CceeeCCCCCCcCCCccc------------CCCCC--CCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEc
Confidence 46777888876 444431 11110 1236777776 777652110 1234555 2457667776
Q ss_pred --CCCeeecCCCCccCCC
Q psy9568 170 --AARTCACYEGWFGRTC 185 (248)
Q Consensus 170 --~~~~C~C~~g~~G~~C 185 (248)
++|+|.|++||+|..-
T Consensus 140 ~~gsy~C~C~~Gy~g~~d 157 (162)
T 1uzk_A 140 TFGSFQCRCPTGYYLNED 157 (162)
T ss_dssp CSSCEEEECCTTCCBCTT
T ss_pred CCCCEEeeCCCCccCCCC
Confidence 6788888888887543
No 32
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.68 E-value=6.3e-09 Score=75.04 Aligned_cols=76 Identities=28% Similarity=0.614 Sum_probs=46.1
Q ss_pred CCceeCCCCcccCCCCccCCCCCCCCCCCCCCC---ceee--CCCeeeCCCCCC---CCCCCcCCCCCCC--CCCCCCCc
Q psy9568 98 VNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNG---GRCK--GVNKCRCPPGFL---GDYCEIWQRPYIC--PKPCKQGV 167 (248)
Q Consensus 98 ~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~---g~C~--~~~~C~C~~g~~---g~~C~~~~~~~~c--~~~C~~g~ 167 (248)
.|+|.|++||.|...++. +|..+|.++ +.|+ +.|.|.|++||+ |..|+ ++++| ..+| +++
T Consensus 23 ~y~C~C~~Gy~g~~~~~~------~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~---dideC~~~~~C-~~~ 92 (118)
T 1dx5_I 23 SYLCVCAEGFAPIPHEPH------RCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICT---DIDECENGGFC-SGV 92 (118)
T ss_dssp CEEEECCTTEEEETTEEE------EEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEE---ECCHHHHCSSC-SSE
T ss_pred CEEeECCCCccccCCCCC------ccccccCCCCCCCcccCCCCeEeECCCCccCCCCCccc---cccccCCCCCC-cCe
Confidence 366777777776543211 111112111 3443 457888888888 67774 24455 3677 677
Q ss_pred cC---CCCeeecCCCCccC
Q psy9568 168 CS---AARTCACYEGWFGR 183 (248)
Q Consensus 168 C~---~~~~C~C~~g~~G~ 183 (248)
|+ ++|+|.|++||+|.
T Consensus 93 C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 93 CHNLPGTFECICGPDSALA 111 (118)
T ss_dssp EEECSSSEEEEECSSSSCE
T ss_pred EEeCCCCEEEECCCCCccC
Confidence 76 78899999999874
No 33
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.60 E-value=1.4e-09 Score=81.57 Aligned_cols=46 Identities=30% Similarity=0.660 Sum_probs=35.1
Q ss_pred CeeeCCCCCC---CCCCCcCCCCCCC---CCCCCCCccC---CCCeeecCCCCccCCC
Q psy9568 137 NKCRCPPGFL---GDYCEIWQRPYIC---PKPCKQGVCS---AARTCACYEGWFGRTC 185 (248)
Q Consensus 137 ~~C~C~~g~~---g~~C~~~~~~~~c---~~~C~~g~C~---~~~~C~C~~g~~G~~C 185 (248)
+.|.|++||+ |..|+ ++++| +.+|.+|+|+ ++|+|.|++||+|..-
T Consensus 88 ~~C~C~~Gy~~~~g~~C~---dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCE---DIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp CCTTTCTTEEEEETTEEE---ECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTT
T ss_pred CcccCCCccccCCCCccC---ccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCC
Confidence 6778999995 77886 34566 3558888887 7899999999997643
No 34
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.50 E-value=3.6e-09 Score=80.67 Aligned_cols=121 Identities=29% Similarity=0.657 Sum_probs=75.1
Q ss_pred cCCCC--cCCCCCCEeecC---CceeeCCCCc----CCCCCc-CC--CC---CCC--CCCCeecC-------CCceeeCC
Q psy9568 18 SGICT--EKCLNGGKCVQK---DTCECQKGFY----GLRCEF-CI--CT---EKC--LNGGKCVQ-------KDTCECQK 73 (248)
Q Consensus 18 ~~~C~--~~C~~~g~C~~~---~~C~C~~G~~----G~~C~~-~~--c~---~~C--~~~g~C~~-------~~~C~C~~ 73 (248)
.+.|. ++|. +++|+++ |+|.|++||+ |..|.. .. |. .+| ..+++|++ .+.|.|++
T Consensus 3 ideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~ 81 (162)
T 1uzk_A 3 VNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSL 81 (162)
T ss_dssp CCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTT
T ss_pred cccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCC
Confidence 45564 5786 6999863 7999999998 788862 22 42 122 24677875 36899999
Q ss_pred CCc-cCCCCcCCCCCCCCCCceecCCCceeCCC--CcccCCCCccCCCCCCCCC---CCCCCCceee---CCCeeeCCCC
Q psy9568 74 GFY-GLRCEFSKCIIPCLNGGRCKGVNKCRCPP--GFLGDYCEIWQRPYISKCI---IPCLNGGRCK---GVNKCRCPPG 144 (248)
Q Consensus 74 g~~-G~~C~~~~C~~~C~~~g~C~~~~~C~C~~--g~~g~~C~~~~~~~~~~c~---~~C~~~g~C~---~~~~C~C~~g 144 (248)
||. |..|+. | .... .+.|.|.|++ ||.+..-.. ....+++|. .+|.+ +.|+ ++|+|.|++|
T Consensus 82 G~~~~~~C~~--C----~~~~--~~~y~C~C~~g~G~~~~~~~~-~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~G 151 (162)
T 1uzk_A 82 GKAWGTPCEM--C----PAVN--TSEYKILCPGGEGFRPNPITV-ILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTG 151 (162)
T ss_dssp CCEETTTTEE--C----CCTT--SHHHHHHCTTCTTEEECTTTC-CEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTT
T ss_pred CCCcCCCccc--C----CCCC--CCCceeECCCCCCcccCCCCC-ccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCC
Confidence 998 666652 2 2111 1347899988 999863110 001223443 35875 6897 6689999999
Q ss_pred CCCCC
Q psy9568 145 FLGDY 149 (248)
Q Consensus 145 ~~g~~ 149 (248)
|+|..
T Consensus 152 y~g~~ 156 (162)
T 1uzk_A 152 YYLNE 156 (162)
T ss_dssp CCBCT
T ss_pred ccCCC
Confidence 99864
No 35
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.49 E-value=1.8e-07 Score=84.31 Aligned_cols=59 Identities=29% Similarity=0.744 Sum_probs=17.8
Q ss_pred CCceee-CCCeeeCCCCCCCCCCCcC--------CCCCCC-CCCCCC-Cc----cC-CCCeeecCCCCccCCCCC
Q psy9568 129 NGGRCK-GVNKCRCPPGFLGDYCEIW--------QRPYIC-PKPCKQ-GV----CS-AARTCACYEGWFGRTCSQ 187 (248)
Q Consensus 129 ~~g~C~-~~~~C~C~~g~~g~~C~~~--------~~~~~c-~~~C~~-g~----C~-~~~~C~C~~g~~G~~C~~ 187 (248)
+++.|. ..++|.|.+||+|.+|+.. .+...| +.+|.+ |. |. .+++|.|++||+|..|++
T Consensus 451 ~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 451 GGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp SSCCBCTTTCCBCBCTTCCSTTTCC--------------------------------------------------
T ss_pred CCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 334444 3468999999999999742 122334 445654 33 43 467899999999999974
No 36
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.44 E-value=7.4e-09 Score=77.59 Aligned_cols=114 Identities=28% Similarity=0.558 Sum_probs=70.9
Q ss_pred cCCCCc-CCCCCCEeecC---CceeeCCCCcCCCCCcCCCCCCCCCCCeecCCCceeeCCCCccCCCCc--CCCC-----
Q psy9568 18 SGICTE-KCLNGGKCVQK---DTCECQKGFYGLRCEFCICTEKCLNGGKCVQKDTCECQKGFYGLRCEF--SKCI----- 86 (248)
Q Consensus 18 ~~~C~~-~C~~~g~C~~~---~~C~C~~G~~G~~C~~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~~--~~C~----- 86 (248)
.+.|.. +|.+ |+|++. |.|.|++||+|..+. ..|++.....|..+|.|..|+. +.|.
T Consensus 4 ideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~-----------~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C 71 (147)
T 2w86_A 4 IDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK-----------TICIETIKGTCWQTVIDGRCEININGATLKSQC 71 (147)
T ss_dssp CCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS-----------SBEEECCCEEEEEEEETTEEEEEEEEEECHHHH
T ss_pred CccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC-----------CeecCCCCCcccCCCCCCccccCCCccccCCcc
Confidence 345554 7874 799863 789999999987653 2343333345666666666653 2221
Q ss_pred ---CCCCCCceec-CCCceeCCCCcc---cCCCCccCCCCCCCCC---CCCCCCceee---CCCeeeCCCCCCCCC
Q psy9568 87 ---IPCLNGGRCK-GVNKCRCPPGFL---GDYCEIWQRPYISKCI---IPCLNGGRCK---GVNKCRCPPGFLGDY 149 (248)
Q Consensus 87 ---~~C~~~g~C~-~~~~C~C~~g~~---g~~C~~~~~~~~~~c~---~~C~~~g~C~---~~~~C~C~~g~~g~~ 149 (248)
.....++.|. -.+.|.|++||+ |..|+ .+ ++|. .+|.+ +.|+ ++|+|.|++||+|..
T Consensus 72 ~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~-di----deC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 72 CSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCE-DI----DECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp HTTTCSEETTTTEECCCCTTTCTTEEEEETTEEE-EC----CHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred ccCcCcccCCCcccCCCcccCCCccccCCCCccC-cc----ccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 0011111121 137889999995 78886 22 3442 34875 5887 568999999998864
No 37
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.31 E-value=6.1e-07 Score=64.07 Aligned_cols=27 Identities=30% Similarity=0.918 Sum_probs=16.5
Q ss_pred cCCCCCCEeecC---CceeeCCCCcCCCCC
Q psy9568 23 EKCLNGGKCVQK---DTCECQKGFYGLRCE 49 (248)
Q Consensus 23 ~~C~~~g~C~~~---~~C~C~~G~~G~~C~ 49 (248)
..|.++|.|++. |.|.|++||+|..|+
T Consensus 20 ~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~ 49 (114)
T 1aut_L 20 SLCCGHGTCIDGIGSFSCDCRSGWEGRFCQ 49 (114)
T ss_dssp STTTTSEEECCCSSCCCEEECTTEESTTSC
T ss_pred ccCCCcCCCCCCCCCcEeeCCCCCcCCCcC
Confidence 336666666542 566666666666665
No 38
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.21 E-value=8.1e-07 Score=63.42 Aligned_cols=57 Identities=28% Similarity=0.698 Sum_probs=29.4
Q ss_pred CCCCCceee---CCCeeeCCCCCCCCCCCcCCCCCCCC---CCCCCCccC---CCCeeecCCCCccC
Q psy9568 126 PCLNGGRCK---GVNKCRCPPGFLGDYCEIWQRPYICP---KPCKQGVCS---AARTCACYEGWFGR 183 (248)
Q Consensus 126 ~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~~~~~c~---~~C~~g~C~---~~~~C~C~~g~~G~ 183 (248)
.|.++|+|+ +.|+|.|.+||+|..|+...+.++|. ..|.+ +|+ ++|+|.|++||+|.
T Consensus 21 ~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~ 86 (114)
T 1aut_L 21 LCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLG 86 (114)
T ss_dssp TTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEEC
T ss_pred cCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeEC
Confidence 355555665 33566666666666665433222231 11211 443 56677777777743
No 39
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.20 E-value=8.2e-07 Score=66.27 Aligned_cols=59 Identities=41% Similarity=0.991 Sum_probs=40.9
Q ss_pred CCCCCCceee---CCCeeeCCCCCCCCCCCcCCCCCCCC---CCCCCCcc-C---CCCeeecCCCCc----cCCCCC
Q psy9568 125 IPCLNGGRCK---GVNKCRCPPGFLGDYCEIWQRPYICP---KPCKQGVC-S---AARTCACYEGWF----GRTCSQ 187 (248)
Q Consensus 125 ~~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~~~~~c~---~~C~~g~C-~---~~~~C~C~~g~~----G~~C~~ 187 (248)
.+|.++|.|+ +.|.|.|++||+|..|+.. +.|. .+|.+ +| + ++|.|.|++||+ |..|+.
T Consensus 54 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~---deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 54 NPCLNGGLCKDDINSYECWCQVGFEGKNCELD---ATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp CSSCTTCEEEECSSCEEEECCSSEESTTTCEE---CCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEE
T ss_pred CCCCCCCEeECCCCCEEEecCCCCcCCcCCCC---ccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCC
Confidence 4677777776 4567888888888877753 3442 23444 56 4 688999999999 777753
No 40
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.19 E-value=1e-06 Score=59.00 Aligned_cols=56 Identities=34% Similarity=0.899 Sum_probs=38.1
Q ss_pred CCCCCCceee---CCCeeeCCCCCC--CCCCCcCCCCCCC--CCCCCCCccC---CCCeeecCCCCccCC
Q psy9568 125 IPCLNGGRCK---GVNKCRCPPGFL--GDYCEIWQRPYIC--PKPCKQGVCS---AARTCACYEGWFGRT 184 (248)
Q Consensus 125 ~~C~~~g~C~---~~~~C~C~~g~~--g~~C~~~~~~~~c--~~~C~~g~C~---~~~~C~C~~g~~G~~ 184 (248)
.+|.+ +.|+ +.|+|.|++||+ |..|+. +++| ..+|.+++|+ ++|+|.|++||+|..
T Consensus 12 ~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~d---ideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 12 DVCKH-GQCINTDGSYRCECPFGYILAGNECVD---TDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp TSCSS-SEECCCSSCCCEECCTTEEEETTEEEE---CCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCS
T ss_pred CCcCC-CEEEecCCCEEEECCCCeECCCCccCC---cccccCCCCCCCCEeECCCCCEEeECCCCeEeCC
Confidence 35654 6676 457788888886 666742 3445 4567777776 678888888888753
No 41
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.15 E-value=1.4e-06 Score=78.52 Aligned_cols=86 Identities=28% Similarity=0.676 Sum_probs=32.7
Q ss_pred Cce-eeCCCCccCCCCc-CCCC-CCCCCCce------ec-CCCceeCCCCcccCCCCccCCCC------CCCCC-CCCCC
Q psy9568 67 DTC-ECQKGFYGLRCEF-SKCI-IPCLNGGR------CK-GVNKCRCPPGFLGDYCEIWQRPY------ISKCI-IPCLN 129 (248)
Q Consensus 67 ~~C-~C~~g~~G~~C~~-~~C~-~~C~~~g~------C~-~~~~C~C~~g~~g~~C~~~~~~~------~~~c~-~~C~~ 129 (248)
..| +|.+||+|..|+. ..|. .+|.++|. |. ..++|.|.+||+|..|+.-...+ ...|. .+|.+
T Consensus 418 ~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~ 497 (525)
T 4aqs_A 418 ERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDL 497 (525)
T ss_dssp TTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC----------------------
T ss_pred CcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCC
Confidence 355 7888888877753 2343 34544444 43 34789999999999997422111 11232 35666
Q ss_pred Cceee-----CCCeeeCCCCCCCCCCCc
Q psy9568 130 GGRCK-----GVNKCRCPPGFLGDYCEI 152 (248)
Q Consensus 130 ~g~C~-----~~~~C~C~~g~~g~~C~~ 152 (248)
+|.+. ..++|.|.+||+|..|+.
T Consensus 498 ~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 498 GGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ----------------------------
T ss_pred CCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 66543 246899999999999873
No 42
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.13 E-value=1.6e-06 Score=64.37 Aligned_cols=33 Identities=45% Similarity=0.993 Sum_probs=20.6
Q ss_pred cCCCC-CCCCCCceec---CCCceeCCCCcccCCCCc
Q psy9568 82 FSKCI-IPCLNGGRCK---GVNKCRCPPGFLGDYCEI 114 (248)
Q Consensus 82 ~~~C~-~~C~~~g~C~---~~~~C~C~~g~~g~~C~~ 114 (248)
+++|. .+|.++|+|+ +.|.|.|++||+|..|+.
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~ 83 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCET 83 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCE
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCcccc
Confidence 34444 5666666775 346677777777776664
No 43
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.12 E-value=1.4e-06 Score=53.45 Aligned_cols=31 Identities=23% Similarity=0.553 Sum_probs=20.5
Q ss_pred CCCCCC-Ccc-----C---CCCeeecCCCCccCCCCCCCC
Q psy9568 160 PKPCKQ-GVC-----S---AARTCACYEGWFGRTCSQRSD 190 (248)
Q Consensus 160 ~~~C~~-g~C-----~---~~~~C~C~~g~~G~~C~~~~~ 190 (248)
.++|.| |+| + +.|+|.|++||+|..|+..+.
T Consensus 13 s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 13 KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp TTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 566665 666 2 467777777777777776544
No 44
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.09 E-value=7.7e-07 Score=69.47 Aligned_cols=75 Identities=31% Similarity=0.719 Sum_probs=16.9
Q ss_pred CccCCCCcCCCC-CCCCCCceec---CCCceeCCCCcccCCCCccC-CCCCCCCCCCCCCCceee---CCCeeeCCCCCC
Q psy9568 75 FYGLRCEFSKCI-IPCLNGGRCK---GVNKCRCPPGFLGDYCEIWQ-RPYISKCIIPCLNGGRCK---GVNKCRCPPGFL 146 (248)
Q Consensus 75 ~~G~~C~~~~C~-~~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~-~~~~~~c~~~C~~~g~C~---~~~~C~C~~g~~ 146 (248)
|++...+++.|. .+|.++|+|+ +.|.|.|++||+|..|+... ..+... ..+|.+ .|+ +.|.|.|.+||+
T Consensus 35 fw~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~-~~~C~~--~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 35 FWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD-NGDCDQ--FCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp ----------------------------------------------CCGGGTG-GGGCSS--EEEEETTEEEEECCTTEE
T ss_pred ccccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCC-CCCCCC--EeECCCCCeEEECCCCce
Confidence 333333455665 5677777776 45778888888888776532 222110 023443 565 446777888877
Q ss_pred ----CCCCCc
Q psy9568 147 ----GDYCEI 152 (248)
Q Consensus 147 ----g~~C~~ 152 (248)
|..|+.
T Consensus 112 l~~dG~~C~~ 121 (195)
T 1nfu_B 112 LADNGKACIP 121 (195)
T ss_dssp ECTTSSCEEE
T ss_pred eCCCCCcccc
Confidence 666654
No 45
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.09 E-value=1.9e-06 Score=64.29 Aligned_cols=58 Identities=36% Similarity=0.854 Sum_probs=32.8
Q ss_pred CCCCCCCeecC---CCceeeCCCCccCCCCc-CCCC---CCCCCCcee-c---CCCceeCCCCcc----cCCCCc
Q psy9568 55 EKCLNGGKCVQ---KDTCECQKGFYGLRCEF-SKCI---IPCLNGGRC-K---GVNKCRCPPGFL----GDYCEI 114 (248)
Q Consensus 55 ~~C~~~g~C~~---~~~C~C~~g~~G~~C~~-~~C~---~~C~~~g~C-~---~~~~C~C~~g~~----g~~C~~ 114 (248)
.+|.++|+|++ .+.|.|++||.|..|+. ++|. .+|.+ .| + +.|.|.|++||. |..|+.
T Consensus 54 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 54 NPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp CSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEEE
T ss_pred CCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCCC
Confidence 34555556654 34566666666666642 3443 12333 45 3 457788888887 666664
No 46
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.08 E-value=9.7e-07 Score=68.88 Aligned_cols=63 Identities=35% Similarity=0.788 Sum_probs=21.0
Q ss_pred cCCCC-CCCCCCCeecC---CCceeeCCCCccCCCCc---CCCC---CCCCCCceec---CCCceeCCCCcc----cCCC
Q psy9568 50 FCICT-EKCLNGGKCVQ---KDTCECQKGFYGLRCEF---SKCI---IPCLNGGRCK---GVNKCRCPPGFL----GDYC 112 (248)
Q Consensus 50 ~~~c~-~~C~~~g~C~~---~~~C~C~~g~~G~~C~~---~~C~---~~C~~~g~C~---~~~~C~C~~g~~----g~~C 112 (248)
+..|. .+|.++|+|++ .|.|.|++||.|..|+. +.|. .+|.+ .|. +.|.|.|++||. |..|
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~~C 119 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKAC 119 (195)
T ss_dssp ---------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCE
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCCcc
Confidence 33443 56777788876 56788888888888863 4565 24554 676 568899999998 7777
Q ss_pred Cc
Q psy9568 113 EI 114 (248)
Q Consensus 113 ~~ 114 (248)
+.
T Consensus 120 ~~ 121 (195)
T 1nfu_B 120 IP 121 (195)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 47
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.07 E-value=2.2e-06 Score=58.06 Aligned_cols=61 Identities=34% Similarity=0.726 Sum_probs=42.1
Q ss_pred CCCCceee---CCCeeeCCCCCC----CCCCCcCCCCCCC-CCCCCCCccC---CCCeeecCCCCccCCCCCCCCCCC
Q psy9568 127 CLNGGRCK---GVNKCRCPPGFL----GDYCEIWQRPYIC-PKPCKQGVCS---AARTCACYEGWFGRTCSQRSDSGE 193 (248)
Q Consensus 127 C~~~g~C~---~~~~C~C~~g~~----g~~C~~~~~~~~c-~~~C~~g~C~---~~~~C~C~~g~~G~~C~~~~~~~~ 193 (248)
| +++.|+ +.|+|.|++||+ |..|+ ++++| ..+|. ++|+ ++|+|.|+ ||.|..++.+...|.
T Consensus 13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~---dideC~~~~C~-~~C~n~~g~y~C~C~-g~~G~~~~~~~~~C~ 84 (87)
T 1z6c_A 13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCE---DIDECSENMCA-QLCVNYPGGYTCYCD-GKKGFKLAQDQKSCE 84 (87)
T ss_dssp B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE---CCCHHHHSCCS-SEECCCSSSCCEECC-SSSCCBCCTTSSSCB
T ss_pred C-CCCEeECCCCCEEEECCCCceECCCCCcCC---CcCeeCCCCCC-CEEEccCCCEEEECC-CCcCCcccCCCCcce
Confidence 5 556665 457888888887 66674 24455 45665 6676 68999998 888888776655554
No 48
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.05 E-value=2.7e-06 Score=56.94 Aligned_cols=25 Identities=36% Similarity=1.027 Sum_probs=13.4
Q ss_pred CCCCCCEeecC---CceeeCCCCc--CCCCC
Q psy9568 24 KCLNGGKCVQK---DTCECQKGFY--GLRCE 49 (248)
Q Consensus 24 ~C~~~g~C~~~---~~C~C~~G~~--G~~C~ 49 (248)
+|.+ |.|++. |.|.|++||+ |..|.
T Consensus 13 ~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~ 42 (82)
T 1emn_A 13 VCKH-GQCINTDGSYRCECPFGYILAGNECV 42 (82)
T ss_dssp SCSS-SEECCCSSCCCEECCTTEEEETTEEE
T ss_pred CcCC-CEEEecCCCEEEECCCCeECCCCccC
Confidence 5543 566542 4566666665 55553
No 49
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.00 E-value=3e-06 Score=62.91 Aligned_cols=60 Identities=37% Similarity=0.809 Sum_probs=37.5
Q ss_pred CCCCCCCeecC---CCceeeCCCCccCCCCc--CCCC-CCCCCCc---eec---C-CCceeCCCCcc----cCCCCc
Q psy9568 55 EKCLNGGKCVQ---KDTCECQKGFYGLRCEF--SKCI-IPCLNGG---RCK---G-VNKCRCPPGFL----GDYCEI 114 (248)
Q Consensus 55 ~~C~~~g~C~~---~~~C~C~~g~~G~~C~~--~~C~-~~C~~~g---~C~---~-~~~C~C~~g~~----g~~C~~ 114 (248)
.+|.++|+|++ .+.|.|++||.|..|+. +.|. .++.+++ .|+ + .|.|.|++||. |..|+.
T Consensus 53 ~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 53 SPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred CCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence 45666677765 35677777777777763 3332 2233333 565 4 67888888888 666654
No 50
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.96 E-value=8e-07 Score=65.36 Aligned_cols=59 Identities=41% Similarity=1.102 Sum_probs=16.0
Q ss_pred CCCCCceee---CCCeeeCCCCCCCCCCCcCCCCCCC---CCCCCCCccC---CCCeeecCCCCc----cCCCC
Q psy9568 126 PCLNGGRCK---GVNKCRCPPGFLGDYCEIWQRPYIC---PKPCKQGVCS---AARTCACYEGWF----GRTCS 186 (248)
Q Consensus 126 ~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~~~~~c---~~~C~~g~C~---~~~~C~C~~g~~----G~~C~ 186 (248)
+|.++|.|+ +.|.|.|++||+|..|+..++ +.| +.+|.+ +|+ ++|.|.|++||+ |..|+
T Consensus 49 pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~-d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 49 PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp --------------------------------C-CGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred CCCCcCCcccCCCCEEeeCCCCccCCccccCCC-CccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCCccC
Confidence 555656665 345666666666666654220 122 123333 444 567777877877 66664
No 51
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.93 E-value=2.1e-06 Score=63.04 Aligned_cols=69 Identities=32% Similarity=0.758 Sum_probs=17.3
Q ss_pred CcCCCC-CCCCCCceec---CCCceeCCCCcccCCCCccC-CCCCCCCCCCCCCCceee---CCCeeeCCCCCC----CC
Q psy9568 81 EFSKCI-IPCLNGGRCK---GVNKCRCPPGFLGDYCEIWQ-RPYISKCIIPCLNGGRCK---GVNKCRCPPGFL----GD 148 (248)
Q Consensus 81 ~~~~C~-~~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~-~~~~~~c~~~C~~~g~C~---~~~~C~C~~g~~----g~ 148 (248)
+++.|. .+|.++|+|+ +.|.|.|++||+|..|+... +.+... ..+|.+ .|+ +.|.|.|.+||+ |.
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~-~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~ 117 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD-NGDCDQ--FCHEEQNSVVCSCARGYTLADNGK 117 (134)
T ss_dssp ----------------------------------------CCGGGTG-GGGCSS--EEEEETTEEEEECCTTEEECTTSS
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccC-CCCCCC--EeECCCCCEEEECCCCcEECCCCC
Confidence 345554 5677777776 35778888888877776532 212110 023433 565 446788888887 66
Q ss_pred CCCc
Q psy9568 149 YCEI 152 (248)
Q Consensus 149 ~C~~ 152 (248)
.|+.
T Consensus 118 ~C~~ 121 (134)
T 2vh0_B 118 ACIP 121 (134)
T ss_dssp CEEE
T ss_pred ccCc
Confidence 6654
No 52
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.87 E-value=0.00077 Score=62.67 Aligned_cols=147 Identities=26% Similarity=0.649 Sum_probs=83.5
Q ss_pred CCCCCCEeecC-Cce----eeCCCCcCCCCCcCCCCC---CCCCCCeecC-CCcee----eCCCCccCCCCc-CCCC---
Q psy9568 24 KCLNGGKCVQK-DTC----ECQKGFYGLRCEFCICTE---KCLNGGKCVQ-KDTCE----CQKGFYGLRCEF-SKCI--- 86 (248)
Q Consensus 24 ~C~~~g~C~~~-~~C----~C~~G~~G~~C~~~~c~~---~C~~~g~C~~-~~~C~----C~~g~~G~~C~~-~~C~--- 86 (248)
.|.+ |.|++. ..| .|..|.-...|....|.. .|. .|.|++ .+.|. |..|.-...|.. ..|.
T Consensus 182 ~C~~-g~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~-~g~Ci~~~~~Cdg~~dC~dgsde~~C~~~~~C~~~~ 259 (699)
T 1n7d_A 182 HCLS-GECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPN 259 (699)
T ss_dssp CCSS-SCCCSTTCTTSSSCCSTTSCSSCSCCCCCCCSSEEESS-SSCEEETTCCSSSCCCSSSSCSSSSTTCCCCCCSTT
T ss_pred ecCC-CceEechhccCCCCCCCCCcccccCCCcccCCCcEecC-CCceeeeecccCCCCCCCCCCccCCCCCCCcccCCC
Confidence 3543 577753 556 677887777776544532 365 367776 34554 667666666642 2342
Q ss_pred -CCCCCCceecC-----CCceeCCCCcccCCCCccCCCCCCCCC---CCCCCCceee---CCCeeeCCCCCC---CCCCC
Q psy9568 87 -IPCLNGGRCKG-----VNKCRCPPGFLGDYCEIWQRPYISKCI---IPCLNGGRCK---GVNKCRCPPGFL---GDYCE 151 (248)
Q Consensus 87 -~~C~~~g~C~~-----~~~C~C~~g~~g~~C~~~~~~~~~~c~---~~C~~~g~C~---~~~~C~C~~g~~---g~~C~ 151 (248)
..|.+ |.|+. .+.+.|..+..+...+-. +++|. ..|. ..|. +.|.|.|++||. |..|+
T Consensus 260 ~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~----~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C~ 332 (699)
T 1n7d_A 260 KFKCHS-GECITLDKVCNMARDCRDWSDEPIKECG----TNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRCE 332 (699)
T ss_dssp CCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCC----CCCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCSSSCCC
T ss_pred ceecCC-CcEeCCcccccccceecCcccccccccc----cccccccccCcC--CCcccCCCCcEEeCCCCeEcCCCCccc
Confidence 34654 55651 134556665543321111 11221 1122 2344 468999999998 56676
Q ss_pred cCCCCCCC--CCCCCCCccC---CCCeeecCCCCccC
Q psy9568 152 IWQRPYIC--PKPCKQGVCS---AARTCACYEGWFGR 183 (248)
Q Consensus 152 ~~~~~~~c--~~~C~~g~C~---~~~~C~C~~g~~G~ 183 (248)
++++| +.+|. ..|. ++|+|.|++||++.
T Consensus 333 ---dideC~~~~~C~-~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 333 ---DIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp ---CCCCCSSSSSCT-TTCCBCSSCBCCCCCSSCBCC
T ss_pred ---CccccCCCCccc-cccccCCCCeeeeeecccccC
Confidence 34555 34453 3555 78999999999964
No 53
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.82 E-value=5.6e-06 Score=71.69 Aligned_cols=27 Identities=41% Similarity=0.691 Sum_probs=17.2
Q ss_pred CCCCC-CEeec---CCceeeCCCCcCCCCCc
Q psy9568 24 KCLNG-GKCVQ---KDTCECQKGFYGLRCEF 50 (248)
Q Consensus 24 ~C~~~-g~C~~---~~~C~C~~G~~G~~C~~ 50 (248)
.|+++ +.|.. ++.|.|+.++.|..|+.
T Consensus 298 ~CnGHas~C~~~~g~~~C~C~~~ttG~~CE~ 328 (426)
T 3zyj_B 298 KCNLHATVCVYDNSKLTCECEHNTTGPDCGK 328 (426)
T ss_dssp CCSSSCSCEEEETTEEEECCCTTEESSSSCE
T ss_pred cCCCchhhcCCCCCCceeeCCCCCcCCCccc
Confidence 45555 35653 14778888888877763
No 54
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.81 E-value=2.7e-05 Score=65.34 Aligned_cols=63 Identities=32% Similarity=0.765 Sum_probs=29.6
Q ss_pred CCCC-CCCCCCceec---CCCceeCCCCcccCCCCccCCCCCCCCCCCCCCCceee---CCCeeeCCCCCCC
Q psy9568 83 SKCI-IPCLNGGRCK---GVNKCRCPPGFLGDYCEIWQRPYISKCIIPCLNGGRCK---GVNKCRCPPGFLG 147 (248)
Q Consensus 83 ~~C~-~~C~~~g~C~---~~~~C~C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~---~~~~C~C~~g~~g 147 (248)
++|. .||.++|.|. +.|.|.|++||.|..|+.+.+.+...-..+|.+ .|. +.|.|.|.+||++
T Consensus 6 ~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~ 75 (317)
T 3h5c_B 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRL 75 (317)
T ss_dssp CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEEC
T ss_pred CcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEeccccccc
Confidence 4454 4565555555 235566666666655553333222100124443 454 3345555555554
No 55
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.80 E-value=1.2e-05 Score=49.22 Aligned_cols=16 Identities=44% Similarity=1.117 Sum_probs=8.8
Q ss_pred CeeeCCCCCCCCCCCc
Q psy9568 137 NKCRCPPGFLGDYCEI 152 (248)
Q Consensus 137 ~~C~C~~g~~g~~C~~ 152 (248)
|.|.|++||+|.+|+.
T Consensus 34 y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 34 YLCKCPNEFTGDRCQN 49 (55)
T ss_dssp EEEEECTTEESTTSCE
T ss_pred EeEeCCCCCcCCCcCc
Confidence 4555555555555554
No 56
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.78 E-value=7.8e-06 Score=57.54 Aligned_cols=13 Identities=46% Similarity=0.879 Sum_probs=0.0
Q ss_pred CCeeeCCCCCCCC
Q psy9568 136 VNKCRCPPGFLGD 148 (248)
Q Consensus 136 ~~~C~C~~g~~g~ 148 (248)
+|.|.|++||++.
T Consensus 88 sy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 88 GYKCQCEEGFQLD 100 (107)
T ss_dssp -------------
T ss_pred CEEEECCCCceEC
Confidence 4555555555543
No 57
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.77 E-value=3.7e-05 Score=64.50 Aligned_cols=55 Identities=31% Similarity=0.776 Sum_probs=46.3
Q ss_pred CCCCCCCeecC---CCceeeCCCCccCCCC--cCCCC----CCCCCCceec---CCCceeCCCCcccCC
Q psy9568 55 EKCLNGGKCVQ---KDTCECQKGFYGLRCE--FSKCI----IPCLNGGRCK---GVNKCRCPPGFLGDY 111 (248)
Q Consensus 55 ~~C~~~g~C~~---~~~C~C~~g~~G~~C~--~~~C~----~~C~~~g~C~---~~~~C~C~~g~~g~~ 111 (248)
.+|.++|+|.+ .+.|.|++||.|..|+ +++|. .+|.+ .|. +.|.|.|.+||.+..
T Consensus 11 ~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 11 QPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGE 77 (317)
T ss_dssp CCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECCT
T ss_pred CCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEeccccccccc
Confidence 57999999987 5799999999999996 57786 46876 887 568999999999854
No 58
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.73 E-value=1.3e-05 Score=54.02 Aligned_cols=53 Identities=30% Similarity=0.726 Sum_probs=34.0
Q ss_pred CCCCceee---CCCeeeCCCCCC-----CCCCCcCCCCCCC-C--CCCCCCccC---CCCeeecCCCCccC
Q psy9568 127 CLNGGRCK---GVNKCRCPPGFL-----GDYCEIWQRPYIC-P--KPCKQGVCS---AARTCACYEGWFGR 183 (248)
Q Consensus 127 C~~~g~C~---~~~~C~C~~g~~-----g~~C~~~~~~~~c-~--~~C~~g~C~---~~~~C~C~~g~~G~ 183 (248)
|.+ +.|+ +.|+|.|++||+ |..|+ ++++| . ..|.+++|+ ++|+|.|++||++.
T Consensus 13 C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~---dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 13 CGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM---DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp TTT-SCEEEETTEEEECCCSSEEECTTTSSSEE---ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCC
T ss_pred CCC-CEEECCCCCEEeeCCCCcCccCCCCCccC---CcccccCCCCcCCCCEeEcCCCCEEEECcCCcccC
Confidence 543 4665 446788888876 45554 24455 2 236567776 67888888888874
No 59
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.73 E-value=9e-06 Score=57.22 Aligned_cols=70 Identities=26% Similarity=0.560 Sum_probs=25.5
Q ss_pred CCCCcccCCCCccCCCCCCCCC---CCCCCCceee---CCCeeeCCCCCCC---CCCCcCCCCCCC--CCCCCCCccC--
Q psy9568 103 CPPGFLGDYCEIWQRPYISKCI---IPCLNGGRCK---GVNKCRCPPGFLG---DYCEIWQRPYIC--PKPCKQGVCS-- 169 (248)
Q Consensus 103 C~~g~~g~~C~~~~~~~~~~c~---~~C~~~g~C~---~~~~C~C~~g~~g---~~C~~~~~~~~c--~~~C~~g~C~-- 169 (248)
...+|.+..|++. +|. ..|. ..|+ +.|.|.|++||+| ..|+ ++++| +.+|. +.|+
T Consensus 18 ~~~~~~~~~Cd~n------eC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~---dideC~~~~~C~-~~C~n~ 85 (107)
T 2w2n_E 18 TENLYFQGAMGTN------ECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE---DIDECQDPDTCS-QLCVNL 85 (107)
T ss_dssp --CCCCSCCBSCC------GGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE---C------------------
T ss_pred cCCCcCCCCCcCc------cCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc---cccccCCCCCcC-CeeecC
Confidence 3467777777542 221 1232 2565 4689999999998 6676 34566 35665 6776
Q ss_pred -CCCeeecCCCCccCC
Q psy9568 170 -AARTCACYEGWFGRT 184 (248)
Q Consensus 170 -~~~~C~C~~g~~G~~ 184 (248)
++|.|.|++||++..
T Consensus 86 ~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 86 EGGYKCQCEEGFQLDP 101 (107)
T ss_dssp ----------------
T ss_pred CCCEEEECCCCceECC
Confidence 789999999999754
No 60
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.72 E-value=3e-05 Score=58.75 Aligned_cols=17 Identities=29% Similarity=0.821 Sum_probs=10.8
Q ss_pred CCeeeCCCCCCCCCCCc
Q psy9568 136 VNKCRCPPGFLGDYCEI 152 (248)
Q Consensus 136 ~~~C~C~~g~~g~~C~~ 152 (248)
.++|.|.++|+|..|+.
T Consensus 130 tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 130 TGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp TCCCCBCTTEESTTCCE
T ss_pred CCEeECCCCCcCCCCCC
Confidence 35666666666666665
No 61
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.71 E-value=2.3e-05 Score=44.36 Aligned_cols=27 Identities=33% Similarity=0.928 Sum_probs=16.9
Q ss_pred CCCCCC-CccC---CCCeeecCCCCccCCCC
Q psy9568 160 PKPCKQ-GVCS---AARTCACYEGWFGRTCS 186 (248)
Q Consensus 160 ~~~C~~-g~C~---~~~~C~C~~g~~G~~C~ 186 (248)
..+|.| |+|+ ++|+|.|++||+|..|+
T Consensus 8 ~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 8 SNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp TCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred CCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 455655 5665 45667777777776664
No 62
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.66 E-value=1.3e-05 Score=69.43 Aligned_cols=27 Identities=41% Similarity=1.051 Sum_probs=0.0
Q ss_pred CCCCCceeeCCCeeeCCCCCCCCCCCc
Q psy9568 126 PCLNGGRCKGVNKCRCPPGFLGDYCEI 152 (248)
Q Consensus 126 ~C~~~g~C~~~~~C~C~~g~~g~~C~~ 152 (248)
+|.|+|+|....+|.|++||+|..|+.
T Consensus 372 ~C~ngg~C~~~~~C~C~~G~~G~~Ce~ 398 (426)
T 3zyj_B 372 HCQNGGTCHNNVRCLCPAAYTGILCEK 398 (426)
T ss_dssp ---------------------------
T ss_pred cCCCCCCcCCCCCCcCCCCCcCCCCcC
Confidence 566666666434666666666666553
No 63
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.60 E-value=4.2e-05 Score=43.23 Aligned_cols=31 Identities=45% Similarity=1.040 Sum_probs=20.6
Q ss_pred CCCC-cCCCCCCEeecC---CceeeCCCCcCCCCC
Q psy9568 19 GICT-EKCLNGGKCVQK---DTCECQKGFYGLRCE 49 (248)
Q Consensus 19 ~~C~-~~C~~~g~C~~~---~~C~C~~G~~G~~C~ 49 (248)
+.|. ++|.++|.|++. +.|.|++||+|+.|+
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 4454 367777777642 567777777777765
No 64
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.55 E-value=2.6e-05 Score=45.89 Aligned_cols=27 Identities=30% Similarity=0.791 Sum_probs=20.5
Q ss_pred CCCCCCccC-----CCCeeecCCCCccCCCCC
Q psy9568 161 KPCKQGVCS-----AARTCACYEGWFGRTCSQ 187 (248)
Q Consensus 161 ~~C~~g~C~-----~~~~C~C~~g~~G~~C~~ 187 (248)
++|.||+|. +.|.|.|++||+|.+|+.
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCccCCCCc
Confidence 577777775 357888888888888864
No 65
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.55 E-value=3.6e-05 Score=45.04 Aligned_cols=28 Identities=36% Similarity=0.794 Sum_probs=18.4
Q ss_pred CCCC-CccC-----CCCeeecCCCCccCCCCCCC
Q psy9568 162 PCKQ-GVCS-----AARTCACYEGWFGRTCSQRS 189 (248)
Q Consensus 162 ~C~~-g~C~-----~~~~C~C~~g~~G~~C~~~~ 189 (248)
+|.| |+|. ++|+|.|++||+|..|+..+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 5665 5663 46677777777777776544
No 66
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.53 E-value=5.1e-06 Score=50.41 Aligned_cols=14 Identities=64% Similarity=1.521 Sum_probs=6.2
Q ss_pred ceeeCCCCccCCCC
Q psy9568 68 TCECQKGFYGLRCE 81 (248)
Q Consensus 68 ~C~C~~g~~G~~C~ 81 (248)
.|.|++||.|.+|+
T Consensus 34 ~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 34 SCECAIGFMGQRCE 47 (52)
T ss_dssp EEECCTTEESTTSC
T ss_pred EEECCCCCcCCCCc
Confidence 44444444444443
No 67
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.43 E-value=0.00012 Score=44.46 Aligned_cols=27 Identities=48% Similarity=1.131 Sum_probs=17.6
Q ss_pred CCCCCCEee--c---CCceeeCCCCcCCCCCc
Q psy9568 24 KCLNGGKCV--Q---KDTCECQKGFYGLRCEF 50 (248)
Q Consensus 24 ~C~~~g~C~--~---~~~C~C~~G~~G~~C~~ 50 (248)
+|.++|.|+ + .+.|.|++||+|..|+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 577777776 3 25677777777777653
No 68
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.43 E-value=6.2e-05 Score=50.73 Aligned_cols=18 Identities=28% Similarity=0.730 Sum_probs=8.8
Q ss_pred CCCEeecC---CceeeCCCCc
Q psy9568 27 NGGKCVQK---DTCECQKGFY 44 (248)
Q Consensus 27 ~~g~C~~~---~~C~C~~G~~ 44 (248)
+++.|++. |.|.|++||+
T Consensus 14 ~~~~C~n~~g~y~C~C~~G~~ 34 (87)
T 1z6c_A 14 GTAVCKNIPGDFECECPEGYR 34 (87)
T ss_dssp TTSSCCCBTTBCCCSSSTTCE
T ss_pred CCCEeECCCCCEEEECCCCce
Confidence 44555432 4555555555
No 69
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.39 E-value=7.5e-05 Score=57.07 Aligned_cols=31 Identities=45% Similarity=1.091 Sum_probs=13.8
Q ss_pred CCCCCCCCCCCeecCCCceeeCCCCccCCCC
Q psy9568 51 CICTEKCLNGGKCVQKDTCECQKGFYGLRCE 81 (248)
Q Consensus 51 ~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~ 81 (248)
.+|..+|.++|.|+...+|.|++||.|..|+
T Consensus 149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERRICECPDGFHGPHCE 179 (188)
T ss_dssp CCCTTCCCTTCEECTTSCEECCTTCBTTTTC
T ss_pred CccCCCCCCCCEeCCCCcccCcCCCCCCCCc
Confidence 3344444444444444444444444444443
No 70
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.38 E-value=1.5e-05 Score=48.32 Aligned_cols=14 Identities=50% Similarity=1.388 Sum_probs=7.0
Q ss_pred ceeCCCCcccCCCC
Q psy9568 100 KCRCPPGFLGDYCE 113 (248)
Q Consensus 100 ~C~C~~g~~g~~C~ 113 (248)
.|.|++||+|..|+
T Consensus 34 ~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 34 SCECAIGFMGQRCE 47 (52)
T ss_dssp EEECCTTEESTTSC
T ss_pred EEECCCCCcCCCCc
Confidence 45555555555444
No 71
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.38 E-value=9.5e-05 Score=49.67 Aligned_cols=53 Identities=38% Similarity=0.943 Sum_probs=32.7
Q ss_pred CCCCceec---CCCceeCCCCcc-----cCCCCccCCCCCCCCC-C--CCCCCceee---CCCeeeCCCCCCCC
Q psy9568 89 CLNGGRCK---GVNKCRCPPGFL-----GDYCEIWQRPYISKCI-I--PCLNGGRCK---GVNKCRCPPGFLGD 148 (248)
Q Consensus 89 C~~~g~C~---~~~~C~C~~g~~-----g~~C~~~~~~~~~~c~-~--~C~~~g~C~---~~~~C~C~~g~~g~ 148 (248)
|.+ +.|+ +.|.|.|++||. |..|+. +++|. . .|. ++.|+ ++|+|.|++||++.
T Consensus 13 C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~d-----ideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 13 CGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMD-----IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp TTT-SCEEEETTEEEECCCSSEEECTTTSSSEEE-----CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred CCC-CEEECCCCCEEeeCCCCcCccCCCCCccCC-----cccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 643 3665 457788888887 445542 22332 2 254 46776 55788999988775
No 72
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.37 E-value=9.7e-05 Score=56.48 Aligned_cols=38 Identities=39% Similarity=0.836 Sum_probs=31.1
Q ss_pred cCCCCcCCCCCCCCCCceecCCCceeCCCCcccCCCCc
Q psy9568 77 GLRCEFSKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEI 114 (248)
Q Consensus 77 G~~C~~~~C~~~C~~~g~C~~~~~C~C~~g~~g~~C~~ 114 (248)
...|..+.|..+|.|+|.|+++..|.|++||.|..|+.
T Consensus 143 ~K~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 143 FKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp EEEECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTCB
T ss_pred cccccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCcC
Confidence 44566677888899999999888999999999988875
No 73
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.32 E-value=0.00015 Score=43.94 Aligned_cols=29 Identities=38% Similarity=0.855 Sum_probs=17.9
Q ss_pred CCCC-CccC-----CCCeeecCCCCccCCCCCCCC
Q psy9568 162 PCKQ-GVCS-----AARTCACYEGWFGRTCSQRSD 190 (248)
Q Consensus 162 ~C~~-g~C~-----~~~~C~C~~g~~G~~C~~~~~ 190 (248)
+|.| |+|+ ++|.|.|++||+|..|+..+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCc
Confidence 5655 5564 456677777777777765443
No 74
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.26 E-value=0.00021 Score=41.69 Aligned_cols=15 Identities=40% Similarity=1.108 Sum_probs=6.4
Q ss_pred CceeCCCCcccCCCC
Q psy9568 99 NKCRCPPGFLGDYCE 113 (248)
Q Consensus 99 ~~C~C~~g~~g~~C~ 113 (248)
|.|.|++||+|..|+
T Consensus 26 ~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 26 YTCNCVIGYSGDRCQ 40 (45)
T ss_dssp EEEECCTTEETTTTC
T ss_pred EEEEcCCCCcCCcCC
Confidence 344444444444443
No 75
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.18 E-value=0.00016 Score=45.47 Aligned_cols=23 Identities=22% Similarity=0.572 Sum_probs=17.3
Q ss_pred CCeeecCCCCccCCCCCCCCCCC
Q psy9568 171 ARTCACYEGWFGRTCSQRSDSGE 193 (248)
Q Consensus 171 ~~~C~C~~g~~G~~C~~~~~~~~ 193 (248)
.|.|.|++||+|..|+..++++.
T Consensus 31 ~y~C~C~~Gf~G~~Ce~~i~~~~ 53 (63)
T 1hae_A 31 RYLCKCQPGFTGARCTENVPMKV 53 (63)
T ss_dssp CEEEECCTTEESTTSCEECCSSC
T ss_pred CEEEECCCCCcCCccCcCcCccc
Confidence 57788888888888877666654
No 76
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.08 E-value=0.00025 Score=41.58 Aligned_cols=26 Identities=42% Similarity=1.263 Sum_probs=15.9
Q ss_pred CCCCCCEeec-----CCceeeCCCCcCCCCCc
Q psy9568 24 KCLNGGKCVQ-----KDTCECQKGFYGLRCEF 50 (248)
Q Consensus 24 ~C~~~g~C~~-----~~~C~C~~G~~G~~C~~ 50 (248)
+|.+ |.|+. .+.|.|++||+|.+|+.
T Consensus 13 pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 5666 66652 24666666666666653
No 77
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.05 E-value=0.0008 Score=63.38 Aligned_cols=129 Identities=25% Similarity=0.613 Sum_probs=48.8
Q ss_pred eeCCCCcCCCCCcCCCC---CCCCCCCeecC-CCce----eeCCCCccCCCCc-CCCC----CCCCCCceecC-----CC
Q psy9568 38 ECQKGFYGLRCEFCICT---EKCLNGGKCVQ-KDTC----ECQKGFYGLRCEF-SKCI----IPCLNGGRCKG-----VN 99 (248)
Q Consensus 38 ~C~~G~~G~~C~~~~c~---~~C~~~g~C~~-~~~C----~C~~g~~G~~C~~-~~C~----~~C~~~g~C~~-----~~ 99 (248)
.|..|.-...|....|. ..|.+ +.|+. ...| .|..|+-+..|.. ..|. .+|.+ |.|+. .+
T Consensus 218 dC~dgsDE~~C~~~~C~~~~f~C~~-g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~ 295 (791)
T 3m0c_C 218 DCKDKSDEENCAVATCRPDEFQCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHS-GECITLDKVCNM 295 (791)
T ss_dssp --------------------------------------------------------CCSTTCCCCTT-SCCCCSSCCSCS
T ss_pred CCCCCCCCCCccccccCCCcceecC-CceEecceecCChhccccccccCcccccccccCCCccccCC-CcccccccccCC
Confidence 45555544455432232 13533 45654 2233 4666665656642 2332 34655 56652 13
Q ss_pred ceeCCCCcccCC--CCccCCCCCCCCCCCCCCC-----ceee---CCCeeeCCCCCC---CCCCCcCCCCCCCC--CCCC
Q psy9568 100 KCRCPPGFLGDY--CEIWQRPYISKCIIPCLNG-----GRCK---GVNKCRCPPGFL---GDYCEIWQRPYICP--KPCK 164 (248)
Q Consensus 100 ~C~C~~g~~g~~--C~~~~~~~~~~c~~~C~~~-----g~C~---~~~~C~C~~g~~---g~~C~~~~~~~~c~--~~C~ 164 (248)
.+.|..|+-... |.. .+|..+ ..|+ +.|.|.|++||. |..|+. +++|. ..|.
T Consensus 296 ~~dC~dgsDe~~~~C~~----------~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~d---ideC~~~~~C~ 362 (791)
T 3m0c_C 296 ARDCRDWSDEPIKECGT----------NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCED---IDECQDPDTCS 362 (791)
T ss_dssp SCCSSSSCSCCCTTBSC----------CSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEEC---CCCCSSSSSCT
T ss_pred ccccccccCcccccccc----------ccccccccCccccccCCCCCcccCCCCCCccCCCCcccc---CcccCCCCCCC
Confidence 445666654432 221 233322 2565 468999999995 667763 45553 3343
Q ss_pred CCccC---CCCeeecCCCCcc
Q psy9568 165 QGVCS---AARTCACYEGWFG 182 (248)
Q Consensus 165 ~g~C~---~~~~C~C~~g~~G 182 (248)
..|. ++|.|.|++||.+
T Consensus 363 -~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 363 -QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp -TTCCBCSSCBCCCCCSSEEC
T ss_pred -CeeecCCCCceeecCCCCEe
Confidence 3555 7899999999985
No 78
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.98 E-value=0.00026 Score=44.52 Aligned_cols=28 Identities=46% Similarity=1.105 Sum_probs=21.6
Q ss_pred cCCCCCCEeec--------CCceeeCCCCcCCCCCc
Q psy9568 23 EKCLNGGKCVQ--------KDTCECQKGFYGLRCEF 50 (248)
Q Consensus 23 ~~C~~~g~C~~--------~~~C~C~~G~~G~~C~~ 50 (248)
++|.++|.|++ .+.|.|++||+|..|+.
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 37888888873 35788888888888863
No 79
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.93 E-value=9.6e-05 Score=46.16 Aligned_cols=35 Identities=23% Similarity=0.585 Sum_probs=24.4
Q ss_pred eccCCCCc-CCCCC--CEeecC---CceeeCCCCc-CCCCCc
Q psy9568 16 FVSGICTE-KCLNG--GKCVQK---DTCECQKGFY-GLRCEF 50 (248)
Q Consensus 16 ~~~~~C~~-~C~~~--g~C~~~---~~C~C~~G~~-G~~C~~ 50 (248)
...+.|.. +|.++ |.|++. |.|.|++||+ |..|+.
T Consensus 9 ~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 9 ETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp TSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 34455644 78877 788753 5788888888 887763
No 80
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.82 E-value=0.0004 Score=42.05 Aligned_cols=29 Identities=38% Similarity=1.069 Sum_probs=21.6
Q ss_pred CcCCCCCCEee--c---CCceeeCCCCcCCCCCc
Q psy9568 22 TEKCLNGGKCV--Q---KDTCECQKGFYGLRCEF 50 (248)
Q Consensus 22 ~~~C~~~g~C~--~---~~~C~C~~G~~G~~C~~ 50 (248)
.++|.++|+|+ + .+.|.|++||+|..|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 35688888886 3 25788888888888874
No 81
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.73 E-value=0.00027 Score=42.80 Aligned_cols=28 Identities=36% Similarity=0.922 Sum_probs=16.7
Q ss_pred CCCCC-CccC-----CCCeeecCCCCccCCCCCC
Q psy9568 161 KPCKQ-GVCS-----AARTCACYEGWFGRTCSQR 188 (248)
Q Consensus 161 ~~C~~-g~C~-----~~~~C~C~~g~~G~~C~~~ 188 (248)
.+|.| |+|. +.|.|.|++||+|..|+..
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 45555 5553 3466777777777777643
No 82
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.68 E-value=0.00023 Score=44.39 Aligned_cols=31 Identities=23% Similarity=0.693 Sum_probs=22.0
Q ss_pred CCC-CCCCCCC---ccC---CCCeeecCCCCc-cCCCCC
Q psy9568 157 YIC-PKPCKQG---VCS---AARTCACYEGWF-GRTCSQ 187 (248)
Q Consensus 157 ~~c-~~~C~~g---~C~---~~~~C~C~~g~~-G~~C~~ 187 (248)
+.| ++||.|| +|+ ++|.|.|++||+ |..|+.
T Consensus 12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 345 5677663 776 667888888888 888853
No 83
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=96.66 E-value=0.0018 Score=53.12 Aligned_cols=56 Identities=32% Similarity=0.776 Sum_probs=38.7
Q ss_pred CCCCCeecCCCceeeCCCCccCCCCcC-----------CCCC-----CCCCCceecCCCceeCCCCc------ccCCCCc
Q psy9568 57 CLNGGKCVQKDTCECQKGFYGLRCEFS-----------KCII-----PCLNGGRCKGVNKCRCPPGF------LGDYCEI 114 (248)
Q Consensus 57 C~~~g~C~~~~~C~C~~g~~G~~C~~~-----------~C~~-----~C~~~g~C~~~~~C~C~~g~------~g~~C~~ 114 (248)
|.++|.|.- +.|.|.+||.|..|+.+ .|.. .|.++|.|+- ++|.|..+| .|..|+.
T Consensus 198 C~g~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 198 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp GGGSEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSSTTCEEESTTSCE
T ss_pred cCCCCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCCCeeEeeEeccc
Confidence 777777775 78888888888888621 4641 3777788874 688887765 4566654
No 84
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.65 E-value=0.00029 Score=64.52 Aligned_cols=49 Identities=24% Similarity=0.466 Sum_probs=41.7
Q ss_pred eeeCCCCcCCCCC-cCCCCCCCCCCCeecCCCceeeCCCCccCCCCcCCCC
Q psy9568 37 CECQKGFYGLRCE-FCICTEKCLNGGKCVQKDTCECQKGFYGLRCEFSKCI 86 (248)
Q Consensus 37 C~C~~G~~G~~C~-~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~~~~C~ 86 (248)
-.|.+||.|++|. ...|...|.+||.|++ +.|.|.+||.|..|....+.
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~~~~~~ 569 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCDEPETS 569 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTTSCEESSC
T ss_pred CccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCCcCccCCC
Confidence 4789999999998 4668889999999997 89999999999999865443
No 85
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.57 E-value=0.094 Score=48.61 Aligned_cols=118 Identities=22% Similarity=0.448 Sum_probs=58.6
Q ss_pred eeCCCCccCCCCcCCCC---CCCCCCceec-CCCcee----CCCCcccCCCCccCCCCCCCCCCCCCCCceeeCC-----
Q psy9568 70 ECQKGFYGLRCEFSKCI---IPCLNGGRCK-GVNKCR----CPPGFLGDYCEIWQRPYISKCIIPCLNGGRCKGV----- 136 (248)
Q Consensus 70 ~C~~g~~G~~C~~~~C~---~~C~~~g~C~-~~~~C~----C~~g~~g~~C~~~~~~~~~~c~~~C~~~g~C~~~----- 136 (248)
.|..|.-...|....|. ..|.+ |.|+ ..+.|. |..|.-...|.... .+...-...|.+ |.|+..
T Consensus 200 dC~dgsDE~~C~~~~C~~~~f~C~~-g~Ci~~~~~Cdg~~dC~dgsde~~C~~~~-~C~~~~~~~C~~-g~Ci~~~~~Cd 276 (699)
T 1n7d_A 200 DCKDKSDEENCAVATCRPDEFQCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNVT-LCEGPNKFKCHS-GECITLDKVCN 276 (699)
T ss_dssp CSTTSCSSCSCCCCCCCSSEEESSS-SCEEETTCCSSSCCCSSSSCSSSSTTCCC-CCCSTTCCCCTT-SCCCCSSCCSC
T ss_pred CCCCCcccccCCCcccCCCcEecCC-CceeeeecccCCCCCCCCCCccCCCCCCC-cccCCCceecCC-CcEeCCccccc
Confidence 45555544555443443 23553 4565 334554 66665555554210 110001134544 556521
Q ss_pred CeeeCCCCCCCCCCCcCCCCCCCC---CCCCCCccC---CCCeeecCCCCc---cCCCCCCCCCCCC
Q psy9568 137 NKCRCPPGFLGDYCEIWQRPYICP---KPCKQGVCS---AARTCACYEGWF---GRTCSQRSDSGED 194 (248)
Q Consensus 137 ~~C~C~~g~~g~~C~~~~~~~~c~---~~C~~g~C~---~~~~C~C~~g~~---G~~C~~~~~~~~~ 194 (248)
+.+.|..++.+...+. +..+|. ..|. ..|. ++|.|.|++||+ |..|+ ++++|..
T Consensus 277 ~~~dC~dgsDe~~~~C--~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~ 339 (699)
T 1n7d_A 277 MARDCRDWSDEPIKEC--GTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD 339 (699)
T ss_dssp SSCCSSSSCSCCCSSC--CCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSS
T ss_pred ccceecCccccccccc--ccccccccccCcC-CCcccCCCCcEEeCCCCeEcCCCCccc-CccccCC
Confidence 3455666654432111 122331 1121 2444 689999999999 77886 7788763
No 86
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.55 E-value=0.0024 Score=55.25 Aligned_cols=49 Identities=35% Similarity=0.768 Sum_probs=30.2
Q ss_pred ceee---CCCeeeCCCCCC---CCCCCcCCCCCCC--CCCCCCCccC---CCCeeecCCCCccC
Q psy9568 131 GRCK---GVNKCRCPPGFL---GDYCEIWQRPYIC--PKPCKQGVCS---AARTCACYEGWFGR 183 (248)
Q Consensus 131 g~C~---~~~~C~C~~g~~---g~~C~~~~~~~~c--~~~C~~g~C~---~~~~C~C~~g~~G~ 183 (248)
+.|. +.|.|.|++||+ |..|+. .++| +.+|.+ .|. ++|.|.|.+||++.
T Consensus 12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~d---ideC~~~~~C~~-~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 12 HVCNDLKIGYECLCPDGFQLVAQRRCED---IDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp SEEEECSSSEEEECCTTEEECSSSCEEE---CCCCSTTSSCSS-CCBCCSSSCBCCCCTTCCCC
T ss_pred CEeECCCCCeEEECCCCCCcCCCCcccC---chhhhccCCCCC-ccCCCccceeeecccccccc
Confidence 4555 346777777776 556642 3444 244543 454 67888888888764
No 87
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.47 E-value=0.0019 Score=46.31 Aligned_cols=56 Identities=36% Similarity=0.668 Sum_probs=32.6
Q ss_pred CCCCCceeeC-----CC-eeeCCCCCCCCCCCcCCCCCCCCCCCCCCccCCCCeeecCCCCccCCCCC
Q psy9568 126 PCLNGGRCKG-----VN-KCRCPPGFLGDYCEIWQRPYICPKPCKQGVCSAARTCACYEGWFGRTCSQ 187 (248)
Q Consensus 126 ~C~~~g~C~~-----~~-~C~C~~g~~g~~C~~~~~~~~c~~~C~~g~C~~~~~C~C~~g~~G~~C~~ 187 (248)
+|.|+|+|.. .+ .|.|+++|+|..|++... ..|.++.- ..|++.+..++.|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-----~~C~~g~G-~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-----KTCYEGNG-HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-----CCSBCSSC-TTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-----CCCccccc-ccceeeccccccCCcccC
Confidence 5666677752 12 677777777777776322 23432211 256777777777777753
No 88
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=96.37 E-value=0.0049 Score=53.10 Aligned_cols=26 Identities=27% Similarity=0.708 Sum_probs=16.6
Q ss_pred CCCCCCE-eec-------CCceeeCCCCcCCCCC
Q psy9568 24 KCLNGGK-CVQ-------KDTCECQKGFYGLRCE 49 (248)
Q Consensus 24 ~C~~~g~-C~~-------~~~C~C~~G~~G~~C~ 49 (248)
.|++|+. |.. .+.|.|..++.|..|+
T Consensus 267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CE 300 (403)
T 2y38_A 267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD 300 (403)
T ss_dssp CCTTBCSCEEESCTTSTTCEEECCCTTEESSSCC
T ss_pred ccCCCccccCCCCCCCccceEeECcCcCcCCCCC
Confidence 4666664 752 1347777777777776
No 89
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.31 E-value=0.0011 Score=40.84 Aligned_cols=27 Identities=48% Similarity=1.185 Sum_probs=21.5
Q ss_pred CCCCCCEee--c-----CCceeeCCCCcCCCCCc
Q psy9568 24 KCLNGGKCV--Q-----KDTCECQKGFYGLRCEF 50 (248)
Q Consensus 24 ~C~~~g~C~--~-----~~~C~C~~G~~G~~C~~ 50 (248)
+|.|+|.|+ . .+.|.|++||+|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 588999997 2 25799999999998874
No 90
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.17 E-value=0.0029 Score=45.27 Aligned_cols=55 Identities=33% Similarity=0.665 Sum_probs=27.0
Q ss_pred CCCCCCEeecC-----C-ceeeCCCCcCCCCCcCCCCCCCCCCCeecCCCceeeCCCCccCCCC
Q psy9568 24 KCLNGGKCVQK-----D-TCECQKGFYGLRCEFCICTEKCLNGGKCVQKDTCECQKGFYGLRCE 81 (248)
Q Consensus 24 ~C~~~g~C~~~-----~-~C~C~~G~~G~~C~~~~c~~~C~~~g~C~~~~~C~C~~g~~G~~C~ 81 (248)
+|.|+|.|++. + .|.|++||+|..|++... ..|..+ . ...|.+.+..++.|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-~~C~~g-~-G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-KTCYEG-N-GHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-CCSBCS-S-CTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-CCCccc-c-cccceeeccccccCCccc
Confidence 46666667542 2 566666666666664321 123221 0 012445555555555553
No 91
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=96.08 E-value=0.0045 Score=52.94 Aligned_cols=19 Identities=26% Similarity=0.453 Sum_probs=12.5
Q ss_pred CceeCCCCcccCCCCccCC
Q psy9568 99 NKCRCPPGFLGDYCEIWQR 117 (248)
Q Consensus 99 ~~C~C~~g~~g~~C~~~~~ 117 (248)
+.|.|.++|.|..|+....
T Consensus 272 ~~C~C~~nt~G~~Ce~C~~ 290 (375)
T 4aqt_A 272 LMCNCKHNTYGVDCEKCLP 290 (375)
T ss_dssp EEECCCTTEESTTSCEECT
T ss_pred eeeeCcCCCcCCCcccCCC
Confidence 4567777777777775443
No 92
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=96.06 E-value=0.0033 Score=37.32 Aligned_cols=28 Identities=29% Similarity=0.889 Sum_probs=20.4
Q ss_pred CCCCCCCccC-----CCCeeecCCCCccCCCCC
Q psy9568 160 PKPCKQGVCS-----AARTCACYEGWFGRTCSQ 187 (248)
Q Consensus 160 ~~~C~~g~C~-----~~~~C~C~~g~~G~~C~~ 187 (248)
...|.||+|. ..+.|.|++||+|.+|+.
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 13 TQFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cCcccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence 3556667665 457888888888888864
No 93
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.94 E-value=0.0037 Score=54.00 Aligned_cols=53 Identities=30% Similarity=0.657 Sum_probs=37.6
Q ss_pred CCCCCCEeecC---CceeeCCCCc---CCCCC-cCCCC--CCCCCCCeecC---CCceeeCCCCccC
Q psy9568 24 KCLNGGKCVQK---DTCECQKGFY---GLRCE-FCICT--EKCLNGGKCVQ---KDTCECQKGFYGL 78 (248)
Q Consensus 24 ~C~~~g~C~~~---~~C~C~~G~~---G~~C~-~~~c~--~~C~~~g~C~~---~~~C~C~~g~~G~ 78 (248)
+|..++.|++. |.|.|++||+ |..|+ +++|. .+|.+ .|++ +|.|.|.+||.+.
T Consensus 7 ~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 7 NGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp GGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 34445688863 6899999998 77885 34454 45654 6776 5799999999864
No 94
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.86 E-value=0.0021 Score=55.19 Aligned_cols=48 Identities=35% Similarity=0.874 Sum_probs=15.6
Q ss_pred CCCeeeCCCCCC----CCCCCcCCCCCCC--CCCCCCCccC---CCCeeecCCCCc----cCCCC
Q psy9568 135 GVNKCRCPPGFL----GDYCEIWQRPYIC--PKPCKQGVCS---AARTCACYEGWF----GRTCS 186 (248)
Q Consensus 135 ~~~~C~C~~g~~----g~~C~~~~~~~~c--~~~C~~g~C~---~~~~C~C~~g~~----G~~C~ 186 (248)
++|.|.|++||+ |..|+. .++| ..+|.++ |. ++|+|.|++||+ |..|.
T Consensus 22 g~~~C~C~~G~~l~~~~~~C~d---~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 22 GAVQCTCHTGYRLTEDGRTCQD---VNECAEEGYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp ---------------------------------CCTTE-EC-----CCEECCTTEEECTTSSCEE
T ss_pred CCcEeECCCCceECCCCCccCc---cceeCCcCcccCc-CCCCCCCCeEEECCCceEcCCCCeEC
Confidence 347788888887 667742 4455 3456544 65 678888888887 66664
No 95
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.60 E-value=0.0047 Score=37.99 Aligned_cols=27 Identities=48% Similarity=1.164 Sum_probs=19.1
Q ss_pred CCCCCCeecC-------CCceeeCCCCccCCCCc
Q psy9568 56 KCLNGGKCVQ-------KDTCECQKGFYGLRCEF 82 (248)
Q Consensus 56 ~C~~~g~C~~-------~~~C~C~~g~~G~~C~~ 82 (248)
+|.++|+|+. .+.|.|++||.|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 5777888861 24677888888877764
No 96
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.59 E-value=0.0099 Score=55.98 Aligned_cols=11 Identities=45% Similarity=1.029 Sum_probs=5.6
Q ss_pred CCceeCCCCcc
Q psy9568 98 VNKCRCPPGFL 108 (248)
Q Consensus 98 ~~~C~C~~g~~ 108 (248)
+|.|.|.+||.
T Consensus 371 sy~C~C~~Gy~ 381 (791)
T 3m0c_C 371 GYKCQCEEGFQ 381 (791)
T ss_dssp CBCCCCCSSEE
T ss_pred CceeecCCCCE
Confidence 34555555554
No 97
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=95.40 E-value=0.018 Score=49.64 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=11.2
Q ss_pred CCeee-cCCCCccCCCC
Q psy9568 171 ARTCA-CYEGWFGRTCS 186 (248)
Q Consensus 171 ~~~C~-C~~g~~G~~C~ 186 (248)
++.|. |..+++|.+|+
T Consensus 356 ~G~C~~C~~nt~G~~CE 372 (403)
T 2y38_A 356 GGVCLDCQHHTTGINCE 372 (403)
T ss_dssp CEEESSCCSSEESTTSC
T ss_pred CCCCCCCcCcCcCCCCC
Confidence 45664 77777777775
No 98
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=95.40 E-value=0.0076 Score=49.42 Aligned_cols=59 Identities=31% Similarity=0.676 Sum_probs=41.2
Q ss_pred CceecCCCceeCCCCcccCCCCccCC---------CCCCC-CCCCCCCCceeeCCCeeeCCCCC------CCCCCCc
Q psy9568 92 GGRCKGVNKCRCPPGFLGDYCEIWQR---------PYISK-CIIPCLNGGRCKGVNKCRCPPGF------LGDYCEI 152 (248)
Q Consensus 92 ~g~C~~~~~C~C~~g~~g~~C~~~~~---------~~~~~-c~~~C~~~g~C~~~~~C~C~~g~------~g~~C~~ 152 (248)
+|.|.- +.|.|.+||.|..|+-... .+... -...|+++|.|+- ++|.|..+| .|.+|+.
T Consensus 201 ~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 201 KGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp SEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSSTTCEEESTTSCE
T ss_pred CCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCCCeeEeeEeccc
Confidence 366663 6899999999999974322 12111 1235999999986 799997765 6888764
No 99
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=95.33 E-value=0.0053 Score=36.47 Aligned_cols=28 Identities=32% Similarity=0.927 Sum_probs=21.0
Q ss_pred CCCCCCccC-----CCCeeecCCCCccCCCCCC
Q psy9568 161 KPCKQGVCS-----AARTCACYEGWFGRTCSQR 188 (248)
Q Consensus 161 ~~C~~g~C~-----~~~~C~C~~g~~G~~C~~~ 188 (248)
..|.||+|. +...|.|++||+|.+|+..
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 556677774 4567999999999999753
No 100
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=95.16 E-value=0.0081 Score=35.64 Aligned_cols=26 Identities=38% Similarity=1.004 Sum_probs=14.9
Q ss_pred CCCCCCccC-----CCCeeecCCCCccCCCC
Q psy9568 161 KPCKQGVCS-----AARTCACYEGWFGRTCS 186 (248)
Q Consensus 161 ~~C~~g~C~-----~~~~C~C~~g~~G~~C~ 186 (248)
..|.||+|. +...|.|++||+|.+|+
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCccccccc
Confidence 345555554 23456666666666665
No 101
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=95.12 E-value=0.008 Score=39.17 Aligned_cols=28 Identities=32% Similarity=0.864 Sum_probs=21.9
Q ss_pred CCCCCCCccC-----CCCeeecCCCCccCCCCC
Q psy9568 160 PKPCKQGVCS-----AARTCACYEGWFGRTCSQ 187 (248)
Q Consensus 160 ~~~C~~g~C~-----~~~~C~C~~g~~G~~C~~ 187 (248)
.+.|.||+|. ..+.|.|++||+|..|+.
T Consensus 45 ~~yClnG~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIHGECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSSEEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCcCCCCEeeeecCCCCeEEEcCCCcccccccc
Confidence 4667788884 467899999999999864
No 102
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.97 E-value=0.0063 Score=52.21 Aligned_cols=50 Identities=30% Similarity=0.850 Sum_probs=16.3
Q ss_pred Eeec---CCceeeCCCCc----CCCCC-cCCCC--CCCCCCCeecC---CCceeeCCCCc----cCCCC
Q psy9568 30 KCVQ---KDTCECQKGFY----GLRCE-FCICT--EKCLNGGKCVQ---KDTCECQKGFY----GLRCE 81 (248)
Q Consensus 30 ~C~~---~~~C~C~~G~~----G~~C~-~~~c~--~~C~~~g~C~~---~~~C~C~~g~~----G~~C~ 81 (248)
.|.+ .+.|.|++||+ |..|. +.+|. .+|.+. |++ ++.|.|.+||. |..|.
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp ------------------------------------CCTTE--EC-----CCEECCTTEEECTTSSCEE
T ss_pred CCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCc--CCCCCCCCeEEECCCceEcCCCCeEC
Confidence 6754 26899999998 88885 34463 467653 776 57899999997 56664
No 103
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=94.93 E-value=0.0049 Score=56.57 Aligned_cols=45 Identities=24% Similarity=0.489 Sum_probs=37.6
Q ss_pred eeCCCCccCCCCc-CCCCCCCCCCceecCCCceeCCCCcccCCCCcc
Q psy9568 70 ECQKGFYGLRCEF-SKCIIPCLNGGRCKGVNKCRCPPGFLGDYCEIW 115 (248)
Q Consensus 70 ~C~~g~~G~~C~~-~~C~~~C~~~g~C~~~~~C~C~~g~~g~~C~~~ 115 (248)
.|.+||.|..|.+ ..|...|.++|.|+. ++|.|.+||.|..|...
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTTSCEE
T ss_pred ccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCCcCcc
Confidence 6788999999884 778888899999985 78999999999888754
No 104
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=94.18 E-value=0.038 Score=47.22 Aligned_cols=15 Identities=40% Similarity=1.123 Sum_probs=11.5
Q ss_pred CceeeCCCCcCCCCC
Q psy9568 35 DTCECQKGFYGLRCE 49 (248)
Q Consensus 35 ~~C~C~~G~~G~~C~ 49 (248)
+.|.|.++|.|..|+
T Consensus 272 ~~C~C~~nt~G~~Ce 286 (375)
T 4aqt_A 272 LMCNCKHNTYGVDCE 286 (375)
T ss_dssp EEECCCTTEESTTSC
T ss_pred eeeeCcCCCcCCCcc
Confidence 457888888888886
No 105
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.90 E-value=0.013 Score=43.73 Aligned_cols=28 Identities=43% Similarity=1.071 Sum_probs=15.6
Q ss_pred CCCCCCceec---CCCceeCCCCcccCCCCc
Q psy9568 87 IPCLNGGRCK---GVNKCRCPPGFLGDYCEI 114 (248)
Q Consensus 87 ~~C~~~g~C~---~~~~C~C~~g~~g~~C~~ 114 (248)
.+|.++|.|. +.|+|.|.+||.|..|+.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred CCCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence 3455555555 345566666666666554
No 106
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.71 E-value=0.014 Score=43.53 Aligned_cols=33 Identities=30% Similarity=0.905 Sum_probs=23.5
Q ss_pred CCCCCC-CccC---CCCeeecCCCCccCCCCCCCCCCC
Q psy9568 160 PKPCKQ-GVCS---AARTCACYEGWFGRTCSQRSDSGE 193 (248)
Q Consensus 160 ~~~C~~-g~C~---~~~~C~C~~g~~G~~C~~~~~~~~ 193 (248)
+.+|.+ |+|. ++|+|.|++||.|..|+.. ++|.
T Consensus 124 ~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~-~~c~ 160 (162)
T 1g1s_A 124 DMSCSKQGECLETIGNYTCSCYPGFYGPECEYV-RDDD 160 (162)
T ss_dssp TTGGGGSEEEEECSSSEEEEECTTEESTTSCEE-CC--
T ss_pred CCCCCCCCEEecCCCCceEeCCCCCcCcccccC-cccC
Confidence 456765 7776 6789999999999999754 3443
No 107
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=93.64 E-value=0.053 Score=39.85 Aligned_cols=28 Identities=50% Similarity=1.058 Sum_probs=17.9
Q ss_pred CCCCCCEeecC-----C-ceeeCCCCcCCCCCcC
Q psy9568 24 KCLNGGKCVQK-----D-TCECQKGFYGLRCEFC 51 (248)
Q Consensus 24 ~C~~~g~C~~~-----~-~C~C~~G~~G~~C~~~ 51 (248)
+|.|+|.|+.. + .|.|++||.|+.|++.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence 57777777542 2 5777777777777643
No 108
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.46 E-value=0.057 Score=31.91 Aligned_cols=15 Identities=47% Similarity=1.289 Sum_probs=8.5
Q ss_pred CceeeCCCCcCCCCC
Q psy9568 35 DTCECQKGFYGLRCE 49 (248)
Q Consensus 35 ~~C~C~~G~~G~~C~ 49 (248)
..|.|++||+|.+|+
T Consensus 30 ~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 30 PACVCHSGYVGARCE 44 (50)
T ss_pred eEEECCCCCcccCCC
Confidence 355555666555554
No 109
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.76 E-value=0.092 Score=38.57 Aligned_cols=15 Identities=53% Similarity=1.170 Sum_probs=8.2
Q ss_pred eeeCCCCCCCCCCCc
Q psy9568 138 KCRCPPGFLGDYCEI 152 (248)
Q Consensus 138 ~C~C~~g~~g~~C~~ 152 (248)
.|.|++||.|..|++
T Consensus 32 ~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 32 WCNCPKKFGGQHCEI 46 (145)
T ss_dssp EEECCTTEESTTSCE
T ss_pred cccCCCCCCCCceec
Confidence 455555555555554
No 110
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=92.70 E-value=0.02 Score=48.71 Aligned_cols=30 Identities=27% Similarity=0.783 Sum_probs=24.4
Q ss_pred ccCCCCcCCCCCCEeecCCceeeCCCCcCCC
Q psy9568 17 VSGICTEKCLNGGKCVQKDTCECQKGFYGLR 47 (248)
Q Consensus 17 ~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~ 47 (248)
....|++.|++||.|++ +.|+|.+||.|.+
T Consensus 190 Ig~~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 190 ISEPCPSYCSGHGDCIS-GVCFCDLGYTAAQ 219 (387)
T ss_dssp EESCCGGGGGGSEEEET-TEEEECTTEEEET
T ss_pred ecccCccccCCCceecC-CeEEecCCcccCC
Confidence 44578888999999987 7899999998864
No 111
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.30 E-value=0.046 Score=49.47 Aligned_cols=29 Identities=31% Similarity=1.042 Sum_probs=23.0
Q ss_pred CCCCCC-CccC----CCCeeecC-CCCccCCCCCC
Q psy9568 160 PKPCKQ-GVCS----AARTCACY-EGWFGRTCSQR 188 (248)
Q Consensus 160 ~~~C~~-g~C~----~~~~C~C~-~g~~G~~C~~~ 188 (248)
+++|.| |+|. +.|.|.|+ +||+|..|+..
T Consensus 6 s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 6 SNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp TCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 678877 7886 46889998 89999988763
No 112
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.02 E-value=0.12 Score=30.51 Aligned_cols=14 Identities=50% Similarity=1.414 Sum_probs=8.1
Q ss_pred ceeeCCCCcCCCCC
Q psy9568 36 TCECQKGFYGLRCE 49 (248)
Q Consensus 36 ~C~C~~G~~G~~C~ 49 (248)
.|.|++||+|.+|+
T Consensus 35 ~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 35 TCKCQQEYFGERCG 48 (50)
T ss_dssp EEECCSSCCSSSCC
T ss_pred eEECCCCccccccc
Confidence 45566666665554
No 113
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=91.29 E-value=0.063 Score=48.35 Aligned_cols=31 Identities=32% Similarity=0.911 Sum_probs=22.8
Q ss_pred CCCc-CCCCCCEeec-C---CceeeC-CCCcCCCCCc
Q psy9568 20 ICTE-KCLNGGKCVQ-K---DTCECQ-KGFYGLRCEF 50 (248)
Q Consensus 20 ~C~~-~C~~~g~C~~-~---~~C~C~-~G~~G~~C~~ 50 (248)
.|.. +|.|+|.|.+ . +.|.|+ +||+|..|+.
T Consensus 4 ~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp GGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred cCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 4544 7888888876 2 678888 8888888874
No 114
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=91.28 E-value=0.082 Score=47.82 Aligned_cols=31 Identities=39% Similarity=1.086 Sum_probs=22.2
Q ss_pred CCCc-CCCCCCEeec----CCceeeC-CCCcCCCCCc
Q psy9568 20 ICTE-KCLNGGKCVQ----KDTCECQ-KGFYGLRCEF 50 (248)
Q Consensus 20 ~C~~-~C~~~g~C~~----~~~C~C~-~G~~G~~C~~ 50 (248)
.|.. +|.|+|.|++ .|.|.|+ +||+|..|+.
T Consensus 3 ~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp TTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 4543 7888888873 3678888 8888888874
No 115
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.10 E-value=0.12 Score=33.54 Aligned_cols=15 Identities=40% Similarity=1.145 Sum_probs=8.4
Q ss_pred CceeeCCCCcCCCCC
Q psy9568 35 DTCECQKGFYGLRCE 49 (248)
Q Consensus 35 ~~C~C~~G~~G~~C~ 49 (248)
+.|.|++||+|..|+
T Consensus 62 ~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 62 PSCICHPGYHGERCH 76 (79)
T ss_dssp CCEEECTTEESTTCC
T ss_pred eEEEcCCCccccccc
Confidence 345555555555554
No 116
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=91.02 E-value=0.081 Score=31.23 Aligned_cols=27 Identities=37% Similarity=1.043 Sum_probs=17.1
Q ss_pred CCCCCceec-----CCCceeCCCCcccCCCCcc
Q psy9568 88 PCLNGGRCK-----GVNKCRCPPGFLGDYCEIW 115 (248)
Q Consensus 88 ~C~~~g~C~-----~~~~C~C~~g~~g~~C~~~ 115 (248)
.|.+ |+|. +...|.|++||+|..|+..
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred cccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 4555 5663 2346778888888777753
No 117
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=90.16 E-value=0.13 Score=38.20 Aligned_cols=28 Identities=43% Similarity=1.162 Sum_probs=21.6
Q ss_pred CCCCCCCeecC---CCceeeCCCCccCCCCc
Q psy9568 55 EKCLNGGKCVQ---KDTCECQKGFYGLRCEF 82 (248)
Q Consensus 55 ~~C~~~g~C~~---~~~C~C~~g~~G~~C~~ 82 (248)
.+|.++|+|.+ .++|.|.+||.|..|+.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred CcCCCCCeecccCCCceeeeCCCcccccccc
Confidence 46777788875 46888888888888874
No 118
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=90.05 E-value=0.056 Score=39.86 Aligned_cols=27 Identities=41% Similarity=0.990 Sum_probs=13.7
Q ss_pred CCCCCceee---CCCeeeCCCCCCCCCCCc
Q psy9568 126 PCLNGGRCK---GVNKCRCPPGFLGDYCEI 152 (248)
Q Consensus 126 ~C~~~g~C~---~~~~C~C~~g~~g~~C~~ 152 (248)
+|.+++.|. ..+.|.|.+||+|..|++
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 444445554 234555555555555553
No 119
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=89.88 E-value=0.11 Score=46.87 Aligned_cols=28 Identities=36% Similarity=0.958 Sum_probs=17.6
Q ss_pred CCCCCCceecC----CCceeCC-CCcccCCCCc
Q psy9568 87 IPCLNGGRCKG----VNKCRCP-PGFLGDYCEI 114 (248)
Q Consensus 87 ~~C~~~g~C~~----~~~C~C~-~g~~g~~C~~ 114 (248)
.||.|+|+|.. .|.|.|. +||+|..|+.
T Consensus 8 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 55666666653 3566666 6666666664
No 120
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=88.85 E-value=0.15 Score=37.79 Aligned_cols=26 Identities=31% Similarity=0.928 Sum_probs=12.1
Q ss_pred CCCCCceec---CCCceeCCCCcccCCCC
Q psy9568 88 PCLNGGRCK---GVNKCRCPPGFLGDYCE 113 (248)
Q Consensus 88 ~C~~~g~C~---~~~~C~C~~g~~g~~C~ 113 (248)
+|.++|.|. ..+.|.|.+||.|..|+
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C~ 154 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGYYGPQCQ 154 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTCBSSSSC
T ss_pred cCCCCCeecccCCCceeeeCCCccccccc
Confidence 344444444 23445555555555444
No 121
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=88.59 E-value=0.08 Score=39.00 Aligned_cols=29 Identities=34% Similarity=0.789 Sum_probs=23.9
Q ss_pred CCCCCC-CccC---CCCeeecCCCCccCCCCCC
Q psy9568 160 PKPCKQ-GVCS---AARTCACYEGWFGRTCSQR 188 (248)
Q Consensus 160 ~~~C~~-g~C~---~~~~C~C~~g~~G~~C~~~ 188 (248)
+.+|.+ |.|. ..|.|.|.+||+|..|++.
T Consensus 124 ~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 124 NTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp TTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 456765 8886 7889999999999999864
No 122
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=86.16 E-value=0.76 Score=31.37 Aligned_cols=33 Identities=15% Similarity=0.397 Sum_probs=24.1
Q ss_pred eeeccCCCCc-CCCCCCEeecC----CceeeCCCCcCC
Q psy9568 14 LLFVSGICTE-KCLNGGKCVQK----DTCECQKGFYGL 46 (248)
Q Consensus 14 ~~~~~~~C~~-~C~~~g~C~~~----~~C~C~~G~~G~ 46 (248)
.+....+|.. .|+.++.|... .+|+|.+||.++
T Consensus 6 ~~~~~h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~d 43 (105)
T 1n1i_A 6 NMSSAHKCIDTNVPENAACYRYLDGTEEWRCLLGFKEV 43 (105)
T ss_dssp --CCTTSCCSSCCCTTEEEEECTTSCEEEEECTTEEEC
T ss_pred cCCcCcEecCCCCCCCCCeEECCCCCEeEEEECCeecc
Confidence 3566778877 58899999752 479999999853
No 123
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=84.48 E-value=1.4 Score=29.87 Aligned_cols=27 Identities=19% Similarity=0.746 Sum_probs=18.7
Q ss_pred CCCc-CCCCCCEeec----CCceeeCCCCcCC
Q psy9568 20 ICTE-KCLNGGKCVQ----KDTCECQKGFYGL 46 (248)
Q Consensus 20 ~C~~-~C~~~g~C~~----~~~C~C~~G~~G~ 46 (248)
+|.. .|+.++.|.. ..+|+|.+||.|+
T Consensus 6 ~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gd 37 (99)
T 1ob1_C 6 QCVKKQCPQNSGCFRHLDEREECKCLLNYKQE 37 (99)
T ss_dssp CCCSCCCCTTEEEECCTTSCCEEEECTTEEEE
T ss_pred EeccCCCCCCCCeEEcCCCCEEEEecCCeecC
Confidence 4444 6778888865 2478888888853
No 124
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=83.94 E-value=0.53 Score=27.57 Aligned_cols=21 Identities=24% Similarity=0.749 Sum_probs=15.2
Q ss_pred CCCCCccC---CCCeeecCCCCccC
Q psy9568 162 PCKQGVCS---AARTCACYEGWFGR 183 (248)
Q Consensus 162 ~C~~g~C~---~~~~C~C~~g~~G~ 183 (248)
+|. +.|+ ++|.|.|++||++.
T Consensus 21 ~C~-~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 21 QCQ-HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp TTS-SEEEEETTEEEEECSTTCEEC
T ss_pred CCC-CEeECCCCCeEEECCCCCeEC
Confidence 343 3555 68999999999864
No 125
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=83.69 E-value=0.35 Score=42.36 Aligned_cols=25 Identities=32% Similarity=0.890 Sum_probs=11.3
Q ss_pred CCC-CCCeecCCCceeeCCCCccCCCC
Q psy9568 56 KCL-NGGKCVQKDTCECQKGFYGLRCE 81 (248)
Q Consensus 56 ~C~-~~g~C~~~~~C~C~~g~~G~~C~ 81 (248)
.|+ ++|+..- +.|.|.+||.|..|+
T Consensus 447 ~C~~g~G~~~C-G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFEC-GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEET-TEEEECTTC------
T ss_pred ccCCCCeeEeC-CceECcCCCCCCCCC
Confidence 454 4555443 667777777776664
No 126
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=81.87 E-value=1.6 Score=39.09 Aligned_cols=20 Identities=30% Similarity=0.747 Sum_probs=11.7
Q ss_pred CCCCCEeec-CCceeeCCCCc
Q psy9568 25 CLNGGKCVQ-KDTCECQKGFY 44 (248)
Q Consensus 25 C~~~g~C~~-~~~C~C~~G~~ 44 (248)
|...|.+.. .|.|.|.+||.
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e 272 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYE 272 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEE
T ss_pred EcCCCCEecccCcEeccCccc
Confidence 555555543 26677777776
No 127
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=80.37 E-value=0.89 Score=40.41 Aligned_cols=26 Identities=27% Similarity=0.821 Sum_probs=14.1
Q ss_pred CCCCCCeecCCCceeeCCCCccCCCC
Q psy9568 56 KCLNGGKCVQKDTCECQKGFYGLRCE 81 (248)
Q Consensus 56 ~C~~~g~C~~~~~C~C~~g~~G~~C~ 81 (248)
.|.++|+|.+...|.|.+||..+.|+
T Consensus 455 ~C~~~GVCNn~~~CHC~~GwaPP~C~ 480 (510)
T 3g5c_A 455 ICSGNGVCSNELKCVCNRHWIGSDCN 480 (510)
T ss_dssp SGGGTEEEBTTSCEEECTTEESTTSC
T ss_pred ccCCCCeeCCCCCcCCCCCCCCCCCC
Confidence 35555555555555555555555554
No 128
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=78.69 E-value=0.94 Score=38.88 Aligned_cols=26 Identities=38% Similarity=0.943 Sum_probs=13.4
Q ss_pred CCCCCCeecC---CCceeeCC-CCccCCCC
Q psy9568 56 KCLNGGKCVQ---KDTCECQK-GFYGLRCE 81 (248)
Q Consensus 56 ~C~~~g~C~~---~~~C~C~~-g~~G~~C~ 81 (248)
+|.++|.|+. .+.|.|+. +|.|..|+
T Consensus 192 pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 192 SCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp SSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred cCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 4555555553 34555553 55555554
No 129
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=78.55 E-value=0.49 Score=38.64 Aligned_cols=32 Identities=22% Similarity=0.667 Sum_probs=22.6
Q ss_pred cCCCC---cCCCCCCEeecC---CceeeCCCCc--CCCCC
Q psy9568 18 SGICT---EKCLNGGKCVQK---DTCECQKGFY--GLRCE 49 (248)
Q Consensus 18 ~~~C~---~~C~~~g~C~~~---~~C~C~~G~~--G~~C~ 49 (248)
.+.|. ..|+.++.|+++ |.|.|++||+ |..|.
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 45664 478888999864 6899999998 45564
No 130
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=77.84 E-value=0.95 Score=39.90 Aligned_cols=24 Identities=13% Similarity=0.469 Sum_probs=11.5
Q ss_pred ceeEEEEEeE-EEeeeccCCCCcCC
Q psy9568 2 RLNVAVVSLM-TILLFVSGICTEKC 25 (248)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~~~C~~~C 25 (248)
+|.|+++.|. .+.+.....|.-+|
T Consensus 435 ~~~i~p~Gf~e~l~V~v~~~C~C~C 459 (503)
T 3v4v_B 435 LLRLRALGFSEELIVELHTLCDCNC 459 (503)
T ss_dssp EEEEEEETSSCEEEEECCCC-----
T ss_pred EEEEccCCCCceEEEEEecccCCCC
Confidence 4677777773 34455656665444
No 131
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=76.43 E-value=1.1 Score=39.91 Aligned_cols=31 Identities=26% Similarity=0.771 Sum_probs=27.6
Q ss_pred CCCc-----CCCCCCEeecCCceeeCCCCcCCCCCc
Q psy9568 20 ICTE-----KCLNGGKCVQKDTCECQKGFYGLRCEF 50 (248)
Q Consensus 20 ~C~~-----~C~~~g~C~~~~~C~C~~G~~G~~C~~ 50 (248)
.|+. .|+.+|+|.+...|+|.+||..++|+.
T Consensus 446 ~C~~~~~~~~C~~~GVCNn~~~CHC~~GwaPP~C~~ 481 (510)
T 3g5c_A 446 TCLSSKEGTICSGNGVCSNELKCVCNRHWIGSDCNT 481 (510)
T ss_dssp CCCCSSTTCSGGGTEEEBTTSCEEECTTEESTTSCE
T ss_pred CCCCcccccccCCCCeeCCCCCcCCCCCCCCCCCCC
Confidence 6763 699999999888999999999999985
No 132
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=74.88 E-value=1.3 Score=37.92 Aligned_cols=31 Identities=29% Similarity=0.842 Sum_probs=25.4
Q ss_pred CC-CCCCCC-CccC---CCCeeecCC-CCccCCCCCC
Q psy9568 158 IC-PKPCKQ-GVCS---AARTCACYE-GWFGRTCSQR 188 (248)
Q Consensus 158 ~c-~~~C~~-g~C~---~~~~C~C~~-g~~G~~C~~~ 188 (248)
.| ..+|.| |+|. ..|.|.|+. +|.|..|+..
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 45 678887 8898 678999995 9999999764
No 133
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=72.34 E-value=0.68 Score=39.41 Aligned_cols=25 Identities=28% Similarity=0.894 Sum_probs=17.3
Q ss_pred CCCCCCCCCeecCCCceeeCCCCccC
Q psy9568 53 CTEKCLNGGKCVQKDTCECQKGFYGL 78 (248)
Q Consensus 53 c~~~C~~~g~C~~~~~C~C~~g~~G~ 78 (248)
|...|.+||.|.. +.|.|.+||.|.
T Consensus 194 Cp~~CsGhG~C~~-g~C~Cd~G~~g~ 218 (387)
T 2ddu_A 194 CPSYCSGHGDCIS-GVCFCDLGYTAA 218 (387)
T ss_dssp CGGGGGGSEEEET-TEEEECTTEEEE
T ss_pred CccccCCCceecC-CeEEecCCcccC
Confidence 4556777777765 677777777764
No 134
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=68.49 E-value=1.2 Score=26.09 Aligned_cols=21 Identities=19% Similarity=0.808 Sum_probs=14.7
Q ss_pred CCCeeecCCCCc----cCCCCCCCCC
Q psy9568 170 AARTCACYEGWF----GRTCSQRSDS 191 (248)
Q Consensus 170 ~~~~C~C~~g~~----G~~C~~~~~~ 191 (248)
++|.|.|++||+ |..|. ++++
T Consensus 17 gs~~C~C~~Gy~L~~d~~tC~-dide 41 (51)
T 1kig_L 17 SEVRCSCAHGYVLGDDSKSCV-STER 41 (51)
T ss_dssp TEECCCCCTTEEECTTSSCEE-ECSS
T ss_pred CCeEEeCCCCcEECCCCCccc-cCCc
Confidence 578999999997 45563 3444
No 135
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=66.77 E-value=1.3 Score=26.26 Aligned_cols=12 Identities=25% Similarity=0.822 Sum_probs=9.1
Q ss_pred CCCeeecCCCCc
Q psy9568 170 AARTCACYEGWF 181 (248)
Q Consensus 170 ~~~~C~C~~g~~ 181 (248)
++|.|.|++||+
T Consensus 20 Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 20 NSVVCSCARGYT 31 (55)
T ss_dssp TEEEEECCTTEE
T ss_pred CCeEEeCCCCCE
Confidence 567788888876
No 136
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=66.69 E-value=1.4 Score=26.03 Aligned_cols=21 Identities=33% Similarity=0.801 Sum_probs=14.4
Q ss_pred CCeeecCCCCc----cCCCCCCCCCC
Q psy9568 171 ARTCACYEGWF----GRTCSQRSDSG 192 (248)
Q Consensus 171 ~~~C~C~~g~~----G~~C~~~~~~~ 192 (248)
+|.|.|++||+ |..|. +++++
T Consensus 20 s~~C~C~~Gy~L~~Dg~tC~-d~dec 44 (53)
T 2bz6_L 20 KRSCRCHEGYSLLADGVSCT-PTVEY 44 (53)
T ss_dssp EEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred CEEeeCCCCCEECCCCCccc-CCccc
Confidence 58899999997 45563 44444
No 137
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=66.52 E-value=2.8 Score=26.40 Aligned_cols=24 Identities=21% Similarity=0.436 Sum_probs=15.7
Q ss_pred CCCCCCceee---CCCeee-CCCCCCCC
Q psy9568 125 IPCLNGGRCK---GVNKCR-CPPGFLGD 148 (248)
Q Consensus 125 ~~C~~~g~C~---~~~~C~-C~~g~~g~ 148 (248)
.+|.+++.|+ ++|+|. +..||.+.
T Consensus 11 ~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 11 EACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred CCCCCCCEeECCCCCeEecccCCccccc
Confidence 3577777887 567886 45577543
No 138
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=66.41 E-value=1.3 Score=36.21 Aligned_cols=21 Identities=24% Similarity=0.648 Sum_probs=11.9
Q ss_pred CCCCCceec---CCCceeCCCCcc
Q psy9568 88 PCLNGGRCK---GVNKCRCPPGFL 108 (248)
Q Consensus 88 ~C~~~g~C~---~~~~C~C~~g~~ 108 (248)
+|..++.|. ++|.|.|.+||.
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~ 37 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCRCVANYT 37 (285)
T ss_dssp GSCTTEEEEECSSCEEEEECTTEE
T ss_pred CCCCCCEeEcCCCCeEEEcCCCCC
Confidence 455555555 445666666665
No 139
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=65.32 E-value=2.3 Score=26.64 Aligned_cols=11 Identities=45% Similarity=1.135 Sum_probs=9.8
Q ss_pred CCeeecCCCCc
Q psy9568 171 ARTCACYEGWF 181 (248)
Q Consensus 171 ~~~C~C~~g~~ 181 (248)
+|.|.|++||.
T Consensus 26 s~~C~C~~Gy~ 36 (69)
T 1kli_L 26 KRSCRCHEGYS 36 (69)
T ss_dssp EEEEECCTTEE
T ss_pred CEEEeCCCCCe
Confidence 68899999997
No 140
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=65.30 E-value=3.2 Score=41.07 Aligned_cols=33 Identities=27% Similarity=0.814 Sum_probs=26.9
Q ss_pred CC-CCCCCC-CccC---CCCeeecC-CCCccCCCCCCCC
Q psy9568 158 IC-PKPCKQ-GVCS---AARTCACY-EGWFGRTCSQRSD 190 (248)
Q Consensus 158 ~c-~~~C~~-g~C~---~~~~C~C~-~g~~G~~C~~~~~ 190 (248)
.| ..+|.| |+|. ..+.|.|+ +||+|..|+....
T Consensus 1019 ~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~~ 1057 (1245)
T 3qcw_A 1019 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGT 1057 (1245)
T ss_dssp CCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCCC
T ss_pred ceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCCc
Confidence 45 678987 8997 67899999 6999999987543
No 141
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=61.38 E-value=3.9 Score=40.44 Aligned_cols=26 Identities=38% Similarity=0.962 Sum_probs=12.4
Q ss_pred CCCCCCeecC---CCceeeC-CCCccCCCC
Q psy9568 56 KCLNGGKCVQ---KDTCECQ-KGFYGLRCE 81 (248)
Q Consensus 56 ~C~~~g~C~~---~~~C~C~-~g~~G~~C~ 81 (248)
+|.++|+|.. .+.|.|+ +||.|..|+
T Consensus 1024 pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~ 1053 (1245)
T 3qcw_A 1024 SCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1053 (1245)
T ss_dssp SSSSSCEEEEETTEEEEECTTSSCBSTTSC
T ss_pred cCCCCCEeCCCCCCCEEECCCCCCCCCCcc
Confidence 4444555543 2345555 355555554
No 142
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=57.44 E-value=2.4 Score=21.06 Aligned_cols=19 Identities=37% Similarity=1.073 Sum_probs=11.2
Q ss_pred CcCCCCCCEeecCCceeeCC
Q psy9568 22 TEKCLNGGKCVQKDTCECQK 41 (248)
Q Consensus 22 ~~~C~~~g~C~~~~~C~C~~ 41 (248)
..+|..+|.|++ +.|.|.+
T Consensus 6 ~~~C~~~gKCmN-gkC~Cy~ 24 (26)
T 1jlz_A 6 RKKCKGSGKCIN-GRCKCYX 24 (26)
T ss_dssp HHHTTSSEEEET-TEEEEC-
T ss_pred hhhhCCCCEEeC-CCceeec
Confidence 335556677776 5677654
No 143
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=45.06 E-value=14 Score=19.09 Aligned_cols=13 Identities=31% Similarity=0.854 Sum_probs=8.3
Q ss_pred CCCEeecCCceeeC
Q psy9568 27 NGGKCVQKDTCECQ 40 (248)
Q Consensus 27 ~~g~C~~~~~C~C~ 40 (248)
.+|.|++ +.|.|.
T Consensus 18 ~~gKC~N-gkC~Cy 30 (31)
T 1cmr_A 18 SKGWCDH-RGCICE 30 (31)
T ss_dssp CCCCEET-TEECCC
T ss_pred CCCceeC-CCceeC
Confidence 4567776 567664
No 144
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=43.57 E-value=11 Score=33.67 Aligned_cols=20 Identities=30% Similarity=0.747 Sum_probs=12.5
Q ss_pred CCCCCeecC-CCceeeCCCCc
Q psy9568 57 CLNGGKCVQ-KDTCECQKGFY 76 (248)
Q Consensus 57 C~~~g~C~~-~~~C~C~~g~~ 76 (248)
|...|..+. .+.|.|.+||.
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e 272 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYE 272 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEE
T ss_pred EcCCCCEecccCcEeccCccc
Confidence 444455433 56788888876
No 145
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=36.97 E-value=5.3 Score=29.48 Aligned_cols=12 Identities=25% Similarity=0.805 Sum_probs=10.8
Q ss_pred CCCeeecCCCCc
Q psy9568 170 AARTCACYEGWF 181 (248)
Q Consensus 170 ~~~~C~C~~g~~ 181 (248)
+++.|.|++||+
T Consensus 146 g~~~C~C~~Gy~ 157 (170)
T 1szb_A 146 GGFYCSCRAGYV 157 (170)
T ss_dssp TEEEEECCTTEE
T ss_pred CCEEEeCCCCcE
Confidence 678999999998
No 146
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=36.85 E-value=11 Score=20.17 Aligned_cols=14 Identities=29% Similarity=0.925 Sum_probs=9.0
Q ss_pred CCCEeecCCceeeCC
Q psy9568 27 NGGKCVQKDTCECQK 41 (248)
Q Consensus 27 ~~g~C~~~~~C~C~~ 41 (248)
.+|.|++ +.|.|.+
T Consensus 21 ~~gKCmN-gkC~Cy~ 34 (35)
T 1wz5_A 21 PNSKCIN-RMCKCYG 34 (35)
T ss_dssp SCCEEET-TEEECSC
T ss_pred CCcceeC-CcceecC
Confidence 5567776 5677654
No 147
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=34.50 E-value=16 Score=32.44 Aligned_cols=33 Identities=27% Similarity=0.875 Sum_probs=25.7
Q ss_pred ccCCCCc----CCCCCCEeecC----CceeeCCCCcC--CCCC
Q psy9568 17 VSGICTE----KCLNGGKCVQK----DTCECQKGFYG--LRCE 49 (248)
Q Consensus 17 ~~~~C~~----~C~~~g~C~~~----~~C~C~~G~~G--~~C~ 49 (248)
....|+. +|+.++.|+.. +.|.|+.||.| ..|.
T Consensus 17 ~~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 17 AQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp BCCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred ccccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 4677865 89999999853 58999999985 4554
No 148
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=29.43 E-value=8 Score=20.06 Aligned_cols=18 Identities=33% Similarity=1.027 Sum_probs=12.2
Q ss_pred CCcCCCCCCEeecCCceee
Q psy9568 21 CTEKCLNGGKCVQKDTCEC 39 (248)
Q Consensus 21 C~~~C~~~g~C~~~~~C~C 39 (248)
|..+|..+|.|++ +.|.|
T Consensus 13 C~~~C~~~gKC~N-gkC~C 30 (31)
T 1pvz_A 13 CSRKCPGNPPCRN-GFCAC 30 (31)
T ss_dssp HHHHSSSCCCEET-TEESC
T ss_pred HHhhhccCCcccC-CCcee
Confidence 4456667788887 66766
No 149
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=28.81 E-value=18 Score=19.55 Aligned_cols=13 Identities=31% Similarity=0.874 Sum_probs=7.7
Q ss_pred CCCEeecCCceeeC
Q psy9568 27 NGGKCVQKDTCECQ 40 (248)
Q Consensus 27 ~~g~C~~~~~C~C~ 40 (248)
.+|.|++ +.|.|.
T Consensus 24 ~~gKCmN-gkC~Cy 36 (37)
T 1bah_A 24 SRGKCMN-KKXRCY 36 (37)
T ss_dssp SCCCBCS-SSBCCC
T ss_pred CCcceeC-CCCCcC
Confidence 4566666 556663
No 150
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=28.63 E-value=17 Score=21.70 Aligned_cols=11 Identities=36% Similarity=0.936 Sum_probs=10.2
Q ss_pred CCeeecCCCCc
Q psy9568 171 ARTCACYEGWF 181 (248)
Q Consensus 171 ~~~C~C~~g~~ 181 (248)
+|.|.|++||.
T Consensus 20 s~~C~C~~Gy~ 30 (59)
T 2wph_E 20 KVVCSCTEGYR 30 (59)
T ss_dssp CEEEECCTTEE
T ss_pred CEEeeCCCCcE
Confidence 78999999997
No 151
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=26.25 E-value=31 Score=30.17 Aligned_cols=15 Identities=40% Similarity=1.283 Sum_probs=6.0
Q ss_pred CeeecCCCCccCCCC
Q psy9568 172 RTCACYEGWFGRTCS 186 (248)
Q Consensus 172 ~~C~C~~g~~G~~C~ 186 (248)
+.|.|.+||.|..|+
T Consensus 458 G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 458 GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TEEEECTTC------
T ss_pred CceECcCCCCCCCCC
Confidence 566677777776663
No 152
>2ktc_A Potassium channel toxin alpha-KTX 9.4; BTK-2, scorpion toxin, KV1.1, disulfide bond, ionic channel inhibitor, neurotoxin; NMR {Mesobuthus tamulus}
Probab=23.92 E-value=29 Score=17.96 Aligned_cols=23 Identities=26% Similarity=0.769 Sum_probs=13.5
Q ss_pred CCCcCCC---CCCEeecCCceeeCCCC
Q psy9568 20 ICTEKCL---NGGKCVQKDTCECQKGF 43 (248)
Q Consensus 20 ~C~~~C~---~~g~C~~~~~C~C~~G~ 43 (248)
.||..|. ....|.+ +.|.|++|-
T Consensus 7 eCP~HCk~k~A~~tCdn-~~C~Cn~~~ 32 (34)
T 2ktc_A 7 ECPMHCKGKMAKPTCEN-EVCKCNIGK 32 (34)
T ss_dssp HHHHTCCTTCCCEEEET-TEEEECTTC
T ss_pred cChhhhccccccccccC-CeEecccCC
Confidence 3555564 2345666 677777764
No 153
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=22.70 E-value=59 Score=29.54 Aligned_cols=37 Identities=19% Similarity=0.406 Sum_probs=21.4
Q ss_pred CCCCCEeecCCceeeCCCCcCCCCCcCCCCCCCC-----CCCeecC
Q psy9568 25 CLNGGKCVQKDTCECQKGFYGLRCEFCICTEKCL-----NGGKCVQ 65 (248)
Q Consensus 25 C~~~g~C~~~~~C~C~~G~~G~~C~~~~c~~~C~-----~~g~C~~ 65 (248)
|.+++.|.. -.+.|..+|.++.+ .|...|. .+..|+.
T Consensus 54 c~~~~~~~~-c~~~C~~~~~~~~~---~c~~~c~~~~~~~~~~C~~ 95 (680)
T 1zlg_A 54 CQNHKQCSK-CLEPCKESGDLRKH---QCQSFCEPLFPKKSYECLT 95 (680)
T ss_pred CCCcccccc-ccCcccccccCchh---hchhhhhccCCCCCCeecC
Confidence 555566654 34578888887664 3334443 3456654
No 154
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=21.79 E-value=39 Score=32.17 Aligned_cols=29 Identities=38% Similarity=0.722 Sum_probs=23.3
Q ss_pred CCCCCCEeec-CC--ceeeCCCCcCCCCCcCC
Q psy9568 24 KCLNGGKCVQ-KD--TCECQKGFYGLRCEFCI 52 (248)
Q Consensus 24 ~C~~~g~C~~-~~--~C~C~~G~~G~~C~~~~ 52 (248)
+|.++|.++. .. .|.|++||.|..|+...
T Consensus 504 PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 504 PCPNNGRPTLSGTECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp CBTTTBEEEEETTEEEEECCTTBCSTTSCCBC
T ss_pred CCCCCCEeecCCCceEEEccCCccccCccCcc
Confidence 7999999984 22 57899999999997544
Done!