Query psy9572
Match_columns 163
No_of_seqs 112 out of 736
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 23:04:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9572.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9572hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3prx_B Cobra venom factor; imm 100.0 2.4E-32 8.2E-37 258.6 16.3 157 3-163 835-1012(1642)
2 4acq_A Alpha-2-macroglobulin; 100.0 2.3E-31 7.9E-36 250.3 16.5 156 3-163 790-968 (1451)
3 2pn5_A TEP1R, thioester-contai 100.0 2E-29 7E-34 235.7 15.6 157 3-163 687-857 (1325)
4 2b39_A C3; thioester, immune d 100.0 1.1E-28 3.6E-33 234.8 18.2 157 3-163 849-1028(1661)
5 2hr0_B Complement C3 alpha' ch 100.0 4.8E-30 1.7E-34 233.0 5.1 157 3-163 102-281 (915)
6 3cu7_A Complement C5; Mg domai 100.0 2.2E-29 7.5E-34 239.6 7.0 157 3-163 844-1026(1676)
7 4fxk_B Complement C4-A alpha c 99.9 9.4E-28 3.2E-32 214.4 12.0 161 3-163 175-350 (767)
8 3hrz_B Cobra venom factor; ser 99.9 6.2E-23 2.1E-27 162.2 13.5 127 4-134 104-245 (252)
9 1hzf_A Complement factor C4A; 99.6 2E-16 6.7E-21 130.7 2.0 67 97-163 2-73 (367)
10 3es6_B Prolactin-inducible pro 99.1 3.7E-10 1.3E-14 79.2 6.9 78 4-83 30-112 (118)
11 2icn_B Prolactin-inducible pro 98.5 3.5E-07 1.2E-11 63.9 8.2 54 4-59 30-88 (118)
12 3idu_A Uncharacterized protein 92.6 0.64 2.2E-05 32.3 7.7 55 5-59 42-98 (127)
13 3e1k_B Lactose regulatory prot 78.5 0.13 4.6E-06 24.2 -1.7 9 1-9 10-18 (22)
14 2l0d_A Cell surface protein; s 76.0 12 0.00041 25.2 6.9 48 26-73 51-107 (114)
15 1g0d_A Protein-glutamine gamma 71.3 24 0.00081 31.2 9.1 56 4-59 494-565 (695)
16 2xzz_A Protein-glutamine gamma 68.6 12 0.00042 24.6 5.4 32 30-61 58-89 (102)
17 2xwx_A GBPA, glcnac-binding pr 66.3 50 0.0017 27.0 9.7 35 26-60 341-375 (391)
18 3bts_E Regulatory protein GAL4 64.2 0.3 1E-05 23.9 -2.4 10 1-10 8-17 (26)
19 1vjj_A Protein-glutamine gluta 62.2 84 0.0029 27.8 12.2 74 4-77 504-596 (692)
20 2q3z_A Transglutaminase 2; tra 61.6 43 0.0015 29.6 8.9 75 4-78 495-590 (687)
21 2r39_A FIXG-related protein; s 57.9 38 0.0013 22.4 9.1 55 5-59 40-101 (118)
22 1g0d_A Protein-glutamine gamma 56.8 90 0.0031 27.6 10.0 45 30-74 638-683 (695)
23 1ex0_A Coagulation factor XIII 54.3 1.2E+02 0.0041 27.0 10.8 70 5-74 653-727 (731)
24 4grd_A N5-CAIR mutase, phospho 34.1 24 0.00083 25.6 2.4 20 129-148 104-123 (173)
25 2e6j_A Hydin protein; PAPD, st 30.0 88 0.003 19.8 4.6 22 30-51 65-86 (112)
26 1vjj_A Protein-glutamine gluta 29.9 2.1E+02 0.0073 25.2 8.1 35 30-64 647-681 (692)
27 3e38_A Two-domain protein cont 28.3 90 0.0031 24.9 5.2 31 26-56 296-327 (343)
28 2q3z_A Transglutaminase 2; tra 27.8 1.9E+02 0.0064 25.5 7.4 35 30-64 641-675 (687)
29 2d42_A Non-toxic crystal prote 27.4 2.1E+02 0.0071 21.9 7.9 34 26-59 141-175 (249)
30 2ys4_A Hydrocephalus-inducing 25.5 57 0.002 21.4 3.1 45 5-51 50-96 (122)
31 3ech_C 25-MER fragment of prot 24.1 21 0.00071 17.0 0.4 7 142-148 2-8 (25)
32 1gui_A Laminarinase 16A; carbo 24.1 1.7E+02 0.0057 19.7 8.5 30 27-56 65-94 (155)
33 2wgn_B Inhibitor of cysteine p 22.5 1.9E+02 0.0064 19.6 5.7 24 37-60 91-114 (132)
34 1gu3_A Endoglucanase C; carboh 22.4 1.9E+02 0.0066 19.8 7.6 35 25-59 48-82 (149)
35 1z9l_A Vesicle-associated memb 22.3 1.7E+02 0.006 19.3 5.7 40 5-44 36-77 (128)
36 1ex0_A Coagulation factor XIII 22.1 4.2E+02 0.014 23.5 13.6 75 4-78 539-633 (731)
37 1wic_A Hypothetical protein ri 21.3 2.1E+02 0.0071 19.7 5.6 43 4-46 43-87 (152)
38 1msp_A MSP, major sperm protei 21.1 1.9E+02 0.0065 19.2 5.6 43 4-46 33-77 (126)
39 3l4c_A Dedicator of cytokinesi 20.9 78 0.0027 23.8 3.2 60 50-110 48-107 (220)
40 2cri_A Vesicle-associated memb 20.2 2.1E+02 0.0073 19.4 5.4 42 4-45 39-82 (147)
41 2x41_A Beta-glucosidase; hydro 20.1 2.2E+02 0.0075 25.0 6.4 22 26-47 656-678 (721)
42 1nc7_A Hypothetical protein TM 20.0 1.4E+02 0.0048 20.6 4.1 35 6-41 54-90 (138)
No 1
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=99.98 E-value=2.4e-32 Score=258.63 Aligned_cols=157 Identities=30% Similarity=0.401 Sum_probs=107.8
Q ss_pred CCCCCCCCcEEEEEEEeeccceE---------EEEEEEcCCCeEEEEEEEEecccceEEEEEEEeec--CCCCeEEEEEE
Q psy9572 3 DHKNVLRYNIREKVYLYEFEVFR---------RKKLTIKANSGSTTTFVITPKELGYIGIKVTATSN--LAGDSMEGKLL 71 (163)
Q Consensus 3 ~~~Ny~~~~~~v~V~l~~~~~~~---------~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~--~~~d~v~~~l~ 71 (163)
.||||++++++|+|+|..+++++ ++.++|++++++.++|+|+|.+.|.+.|+|+|.+. ..+|+++|.|+
T Consensus 835 ~VfNy~~~~~~V~V~L~~s~~~~~~~~~~~~~~q~v~v~a~~~~~v~f~i~p~~~G~~~i~v~A~~~~~~~~D~v~k~L~ 914 (1642)
T 3prx_B 835 ILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEIKASVQEALWSDGVRKKLK 914 (1642)
T ss_dssp EEEECSSSCEEEEEEECCCTTEEESCCSSSCCEEEEEECSSEEEEEEEEEEECSCEEEEEEEEEEESSSSCEEEEEEEEE
T ss_pred EEEcCCCCcEEEEEEEEcCCCeEeeccCCCcceeEEEECCCCeEEEEEEEEEeecccEEEEEEEEecCCCccceEEEEEE
Confidence 47999999999999999877763 57899999999999999999999999999999764 36799999999
Q ss_pred EeeCCeeEEEEEEEEEecCCC---CceEEEEecCCCCCCcCCcce-EEEEEEeccCCCcccchh------hhHhhhhhCC
Q psy9572 72 VKPEGETQYKNKAIFVDLRKN---KTFSVNVTLDMPKNIVPGSEH-VEVSAVACKIGDLLGPSI------PNLANLIKMP 141 (163)
Q Consensus 72 V~~~g~~~~~~~~~~l~~~~~---~~~~~~~~~~lp~~~vpgS~~-~~v~v~~~~~~~~~~~~~------~~l~~Li~~P 141 (163)
|+|+|++++++.+.+|++++. +.+++.+++.+|++++|||.+ ++|+++ ||+++..+ ++|++|++||
T Consensus 915 V~peg~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~p~~~vpgS~~~~~vsv~----gd~lg~~i~~~l~~~~L~~Ll~~P 990 (1642)
T 3prx_B 915 VVPEGVQKSIVTIVKLDPRAKGVGGTQLEVIKARKLDDRVPDTEIETKIIIQ----GDPVAQIIENSIDGSKLNHLIITP 990 (1642)
T ss_dssp EECSSEEEEEEEEEEECTTTTCSSSEEEEEECCCCCCSBCTTCCEEEEEEEE----EEC---------------------
T ss_pred EecCCccEEEEEEEEEcCCcccCCcceeEEEecccccccCCCCcccEEEEEE----cccchhhhhcccchhhHHHHHhcC
Confidence 999999999999999999742 346788999999999999997 799999 88888877 6999999999
Q ss_pred CCchhhhhhhhhHHHHHHhhcC
Q psy9572 142 FGCGEQNMLNFVPNIVVLEYLK 163 (163)
Q Consensus 142 yGC~EQt~s~~~P~l~~~~YL~ 163 (163)
|||+|||||+++|++|+++||+
T Consensus 991 yGCgEQnms~~~P~v~v~~yL~ 1012 (1642)
T 3prx_B 991 SGCGEQNMIRMAAPVIATYYLD 1012 (1642)
T ss_dssp ----------------------
T ss_pred CCcHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999985
No 2
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=250.33 Aligned_cols=156 Identities=36% Similarity=0.542 Sum_probs=143.7
Q ss_pred CCCCCCCCcEEEEEEEeeccceE-------EEEEEEcCCCeEEEEEEEEecccceEEEEEEEeecC--------------
Q psy9572 3 DHKNVLRYNIREKVYLYEFEVFR-------RKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNL-------------- 61 (163)
Q Consensus 3 ~~~Ny~~~~~~v~V~l~~~~~~~-------~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~-------------- 61 (163)
.++||++++++|+|++..++.++ .++++|++++++.++|+|+|.+.|.+.|+|+|.+..
T Consensus 790 ~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~~~G~~~i~v~a~~~~~~~~~~~~~~~~~~ 869 (1451)
T 4acq_A 790 TVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNFTVSAEALESQELCGTEVPSVPE 869 (1451)
T ss_dssp EEEECSSSCEEEEEEECCCTTEEEEESCSCCCCEEECTTEEEEEEEEEEECSCEEEEEEEEEEECTTCCCSSSSCCCCCS
T ss_pred EEEeccCccEEEEEEEEcCCCeEeecCCCCceEEEECCCCeEEEEEEEEECccceEEEEEEEEEccCccccccccccccc
Confidence 47999999999999999988764 367999999999999999999999999999998753
Q ss_pred --CCCeEEEEEEEeeCCeeEEEEEEEEEecCCCCceEEEEecCCCCCCcCCcceEEEEEEeccCCCcccchhhhHhhhhh
Q psy9572 62 --AGDSMEGKLLVKPEGETQYKNKAIFVDLRKNKTFSVNVTLDMPKNIVPGSEHVEVSAVACKIGDLLGPSIPNLANLIK 139 (163)
Q Consensus 62 --~~d~v~~~l~V~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~vpgS~~~~v~v~~~~~~~~~~~~~~~l~~Li~ 139 (163)
.+|+++|.|+|+|+|++++++.+..|++.+. .+++.+++.+|.+++|||.+++++++ |++++.++++|++|++
T Consensus 870 ~~~~D~v~k~L~V~peg~~~~~~~~~~l~~~g~-~~~~~~~~~~p~~~vpgs~~~~vsv~----g~~~~~~~~~l~~L~~ 944 (1451)
T 4acq_A 870 HGRKDTVIKPLLVEPEGLEKETTFNSLLCPSGG-EVSEELSLKLPPNVVEESARASVSVL----GDILGSAMQNTQNLLQ 944 (1451)
T ss_dssp SCCCEEEEEEEEEECSSEEEEEECCEEECCSSE-EEEEEECCCCCTTBCTTCCEEEEEEC----CCCCCSTTTTGGGGCC
T ss_pred cccceEEEEEEeccCCceeEEEEEEEEEecCCC-cceEEEeccCchhcCCCCccEEEEEe----CcchHHHHHhHHHHHh
Confidence 4799999999999999999999999999642 36788899999999999999999999 9999999999999999
Q ss_pred CCCCchhhhhhhhhHHHHHHhhcC
Q psy9572 140 MPFGCGEQNMLNFVPNIVVLEYLK 163 (163)
Q Consensus 140 ~PyGC~EQt~s~~~P~l~~~~YL~ 163 (163)
|||||+|||||+++|++|+++||+
T Consensus 945 yPyGC~EQ~ms~~~P~l~~~~yL~ 968 (1451)
T 4acq_A 945 MPYGCGEXNMVLFAPNIYVLDYLN 968 (1451)
T ss_dssp CCCSSTTTTHHHHHHHHHHHHHHH
T ss_pred CCCCchhhhhhhhhhHHHHHHHHH
Confidence 999999999999999999999983
No 3
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=2e-29 Score=235.71 Aligned_cols=157 Identities=32% Similarity=0.507 Sum_probs=141.5
Q ss_pred CCCCCCCCcEEEEEEEeeccc-e-----------EEEEEEEcCCCeEEEEEEEEecccceEEEEEEEeecC--CCCeEEE
Q psy9572 3 DHKNVLRYNIREKVYLYEFEV-F-----------RRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNL--AGDSMEG 68 (163)
Q Consensus 3 ~~~Ny~~~~~~v~V~l~~~~~-~-----------~~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~--~~d~v~~ 68 (163)
.++||++++++|+|++..++. + ..+.++|++++++.++|+|+|.+.|.+.|+|+|.+.. .+|++++
T Consensus 687 ~v~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~f~i~~~~~G~~~i~v~a~~~~~~~~D~v~~ 766 (1325)
T 2pn5_A 687 TLFNNLGAEYIADVTLYNVANQTEFVGRPNTDLSYTKSVSVPPKVGVPISFLIKARKLGEMAVRVKASIMLGHETDALEK 766 (1325)
T ss_dssp EEEECSSSCEEEEEEEECGGGCEEETTSCTTCCEEEEEEEECTTCCEEEEEEEEECSSEEEEEEEEEESSTTSSEEEEEE
T ss_pred EEEeCCCCcEEEEEEEeecCCceEEeccCCCCCcceEEEEECCCCeEEEEEEEEEcccceEEEEEEEEecCCCCCcEEEE
Confidence 479999999999999976532 1 3678999999999999999999999999999998764 5799999
Q ss_pred EEEEeeCCeeEEEEEEEEEecCCCCceEEEEecCCCCCCcCCcceEEEEEEeccCCCcccchhhhHhhhhhCCCCchhhh
Q psy9572 69 KLLVKPEGETQYKNKAIFVDLRKNKTFSVNVTLDMPKNIVPGSEHVEVSAVACKIGDLLGPSIPNLANLIKMPFGCGEQN 148 (163)
Q Consensus 69 ~l~V~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~vpgS~~~~v~v~~~~~~~~~~~~~~~l~~Li~~PyGC~EQt 148 (163)
.|+|+|+|+.++++.+..|++++.+.++..+++++|.++++||.+++|+++ |++++.++++|++|++|||||+|||
T Consensus 767 ~l~V~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~s~~~~vs~~----~~~~~~~~~~L~~L~~~PyGC~EQ~ 842 (1325)
T 2pn5_A 767 VIRVMPESLVQPRMDTRFFCFDDHKNQTFPINLDINKKADSGSTKIEFRLN----PNLLTTVIKNLDHLLGVPTGCGEQN 842 (1325)
T ss_dssp EEEEECSSCCCCEEEEEEEEEEEEEEEEEEEECCCCCSSCCSCCEEEEEEE----SSTTHHHHHTTTCCCSSCCCSTTGG
T ss_pred EEEEecCceEEEEEEEEEEeccCCCceEEEEeccCCCCCCCCCeeEEEEEE----echHHHHHHhHHHHhcCCCCchhHH
Confidence 999999999999999999998532335677899999999999999999999 9999999999999999999999999
Q ss_pred hhhhhHHHHHHhhcC
Q psy9572 149 MLNFVPNIVVLEYLK 163 (163)
Q Consensus 149 ~s~~~P~l~~~~YL~ 163 (163)
||+++|++|+++||+
T Consensus 843 ~s~~~p~~~~~~yl~ 857 (1325)
T 2pn5_A 843 MVKFVPNILVLDYLH 857 (1325)
T ss_dssp GGGTHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHH
Confidence 999999999999983
No 4
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=99.96 E-value=1.1e-28 Score=234.81 Aligned_cols=157 Identities=25% Similarity=0.379 Sum_probs=141.0
Q ss_pred CCCCCCC-CcEEEEEEEeeccce---------EEEEEEEcCCCeEEEEEEEEecccceEEEEEEEeecC--CCCeEEEEE
Q psy9572 3 DHKNVLR-YNIREKVYLYEFEVF---------RRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNL--AGDSMEGKL 70 (163)
Q Consensus 3 ~~~Ny~~-~~~~v~V~l~~~~~~---------~~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~--~~d~v~~~l 70 (163)
.|+||++ ++++|+|+|..++.+ .++.++|++++++.++|+|+|.+.|.+.|+|+|.+.. .+|++++.|
T Consensus 849 ~V~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v~a~~~~~~~~D~v~~~L 928 (1661)
T 2b39_A 849 ILYNYREAENLKVRVELLYNPAFCSLATAKKRHQQTITIPARSSVAVPYVIVPLKIGLHEVEVKAAVYNHFISDGVKKTL 928 (1661)
T ss_dssp EEEECCTTCCEEEEEEECCCTTEECSSCSSCCCEEEEEECTTCEEEEEEEEEECSCEEEEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEcCCCCccEEEEEEEcCCCCeEeecCCCCcceEEEEECCCCcEEEEEEEEEcccCeEEEEEEEEecCCCCCceEEEEE
Confidence 4799999 999999999987765 2588999999999999999999999999999998853 689999999
Q ss_pred EEeeCCeeE-EEEEEEEEecCC---CCceEEEEecCCCCCCcCCcce-EEEEEEeccCCCcccchhhh------Hhhhhh
Q psy9572 71 LVKPEGETQ-YKNKAIFVDLRK---NKTFSVNVTLDMPKNIVPGSEH-VEVSAVACKIGDLLGPSIPN------LANLIK 139 (163)
Q Consensus 71 ~V~~~g~~~-~~~~~~~l~~~~---~~~~~~~~~~~lp~~~vpgS~~-~~v~v~~~~~~~~~~~~~~~------l~~Li~ 139 (163)
+|+|+|++. +++.+..|++++ .+.+++++++.+|.+++|||.+ ++|+++ |++++.++++ |++|++
T Consensus 929 ~V~p~g~~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~p~~~vp~s~~~~~vsv~----g~~~~~~l~~~~~~~~l~~L~~ 1004 (1661)
T 2b39_A 929 KVVPEGVRVNKTVAVRTLNPEHLGQGGVQREEVPAADLSDQVPDTESETKILLQ----GTPVAQMTEDAIDGERLKHLIQ 1004 (1661)
T ss_dssp EEECSSEEEEEEEEEEEECHHHHCSSSCEEEEECCCCCSSBCTTCCCEEEEEEE----SSTTHHHHHHHSSTTTGGGSSS
T ss_pred EEecCCeeEEEEEEEEEEeccccCCCcceEEEEeccCccccCCCCceeEEEEEe----cccchhhhhcccchhhhHHHhh
Confidence 999999865 577888999852 2346789999999999999998 999999 9999998865 999999
Q ss_pred CCCCchhhhhhhhhHHHHHHhhcC
Q psy9572 140 MPFGCGEQNMLNFVPNIVVLEYLK 163 (163)
Q Consensus 140 ~PyGC~EQt~s~~~P~l~~~~YL~ 163 (163)
|||||+|||||+++|++|+++||+
T Consensus 1005 ~PyGC~EQ~~s~~~P~~~~~~yL~ 1028 (1661)
T 2b39_A 1005 TPSGCGEQNMIGMTPTVIAVHYLD 1028 (1661)
T ss_dssp SCCCSTTGGGGGTHHHHHHHHHHH
T ss_pred cCCCchhhhhhhcccHHHHHHHHH
Confidence 999999999999999999999984
No 5
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=99.96 E-value=4.8e-30 Score=233.01 Aligned_cols=157 Identities=24% Similarity=0.376 Sum_probs=136.1
Q ss_pred CCCCCCC-CcEEEEEEEeeccce---------EEEEEEEcCCCeEEEEEEEEecccceEEEEEEEeec--CCCCeEEEEE
Q psy9572 3 DHKNVLR-YNIREKVYLYEFEVF---------RRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSN--LAGDSMEGKL 70 (163)
Q Consensus 3 ~~~Ny~~-~~~~v~V~l~~~~~~---------~~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~--~~~d~v~~~l 70 (163)
.|+||++ ++++|+|++..++.+ ..+.++|++++++.++|+|+|.+.|.+.|+|+|.+. ..+|++++.|
T Consensus 102 ~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~i~~~~~G~~~i~v~a~~~~~~~~D~v~~~l 181 (915)
T 2hr0_B 102 VLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPLKTGLQEVEVKAAVYHHFISDGVRKSL 181 (915)
T ss_dssp EEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEECTTEEEEEEEEEEECSCEEEEEEEEEEESSSCCEEEEEEEE
T ss_pred EEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEECCCCeEEEEEEEEECccceEEEEEEEEecCCCCCceEEEEE
Confidence 5899999 999999999887664 358899999999999999999999999999999884 3589999999
Q ss_pred EEeeCCeeEE-EEEEEEEecCCC---CceEEEEecCCCCCCcCCcce-EEEEEEeccCCCcccchhhh------Hhhhhh
Q psy9572 71 LVKPEGETQY-KNKAIFVDLRKN---KTFSVNVTLDMPKNIVPGSEH-VEVSAVACKIGDLLGPSIPN------LANLIK 139 (163)
Q Consensus 71 ~V~~~g~~~~-~~~~~~l~~~~~---~~~~~~~~~~lp~~~vpgS~~-~~v~v~~~~~~~~~~~~~~~------l~~Li~ 139 (163)
+|+|+|++.. .+.+..|++++. +.+++.+++.+|.+++|||.+ ++|+++ |++++..+++ |++|++
T Consensus 182 ~V~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vp~s~~~~~vs~~----~~~~~~~l~~~~~~~~l~~L~~ 257 (915)
T 2hr0_B 182 KVVPEGIRMNKTVAVRTLDPERLGREGVQKEDIPPADLSDQVPDTESETRILLQ----GTPVAQMTEDAVDAERLKHLIV 257 (915)
T ss_dssp EEECSCCC---CHHHHHHTTSCCSSCSSSSSSSCTTCCSSCCSSCCCCCC-CCS----SSSSSHHHHHHHSSSSGGGGCS
T ss_pred EEccCCceeEEEEEEEEEeccccCCCcceeEEEeccCccccCCCCceeEEEEEE----cccchhhhhcccchhhHHHHHh
Confidence 9999998644 666777888632 235667889999999999998 999999 9989888866 999999
Q ss_pred CCCCchhhhhhhhhHHHHHHhhcC
Q psy9572 140 MPFGCGEQNMLNFVPNIVVLEYLK 163 (163)
Q Consensus 140 ~PyGC~EQt~s~~~P~l~~~~YL~ 163 (163)
|||||+|||||+++|++|+++||+
T Consensus 258 yPyGC~EQ~~s~~~P~l~~~~yL~ 281 (915)
T 2hr0_B 258 TPSGCGEQNMIGMTPTVIAVHYLD 281 (915)
T ss_dssp SCCCSTTGGGGGTHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999999984
No 6
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=99.95 E-value=2.2e-29 Score=239.65 Aligned_cols=157 Identities=22% Similarity=0.311 Sum_probs=143.2
Q ss_pred CCCCCCCCcEEEEEEEeeccceE----------------EEEEEEcCCCeEEEEEEEEecccceEEEEEEEeecCCCCeE
Q psy9572 3 DHKNVLRYNIREKVYLYEFEVFR----------------RKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSM 66 (163)
Q Consensus 3 ~~~Ny~~~~~~v~V~l~~~~~~~----------------~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~~~d~v 66 (163)
.|+||++++++|+|++..++.++ ++.++|++++++.++|+|+|.+.|.+.|+|+|.+...+|++
T Consensus 844 ~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v~A~~~~~~D~v 923 (1676)
T 3cu7_A 844 TVYNYRTSGMQFCVKMSAVEGICTSESPVIDHQGTKSSKCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEIL 923 (1676)
T ss_dssp EEEECSSSCBCCCCEECCCTTEECSSCC----------CCCCCCBCTTEEEECCEEEEECSSSCCCEEEEEEETTEEEEE
T ss_pred EEEcCCCCcEEEEEEEecCCCeEEeccccccccccccceeEEEEECCCCeEEEEEEEEEcccCcEEEEEEEEecCCCceE
Confidence 47999999999999999876653 25789999999999999999999999999999988778999
Q ss_pred EEEEEEeeCCeeEEEEEEEEEecCCC--CceE-EEEecCCCCCCcCCcce-EEEEEEeccCCCcccchhh------hHhh
Q psy9572 67 EGKLLVKPEGETQYKNKAIFVDLRKN--KTFS-VNVTLDMPKNIVPGSEH-VEVSAVACKIGDLLGPSIP------NLAN 136 (163)
Q Consensus 67 ~~~l~V~~~g~~~~~~~~~~l~~~~~--~~~~-~~~~~~lp~~~vpgS~~-~~v~v~~~~~~~~~~~~~~------~l~~ 136 (163)
++.|+|+|+|++++++.+..|++++. +.++ +++++.+|.+++|||.+ ++|+++ |++++.+++ +|++
T Consensus 924 ~~~L~V~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vp~s~~~~~v~~~----~~~~~~~~~~~l~~~~L~~ 999 (1676)
T 3cu7_A 924 VKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVK----GLLVGEILSAVLSQEGINI 999 (1676)
T ss_dssp EECCCEECSCEEEEEEEEEEEBTTCTTTSCBCCEEECCCCCTTBCTTCCCEEEEEEE----SSTTHHHHHHHHSSSSCCC
T ss_pred EEEEEEecCceEEEEEEEEEEecccccCcceeeEEEeccCccccCCCCceEEEEEEE----cccchhhhhhccchhhhHH
Confidence 99999999999999999999999742 2245 78999999999999998 999999 999999988 9999
Q ss_pred hhhCCCCchhhhhhhhhHHHHHHhhcC
Q psy9572 137 LIKMPFGCGEQNMLNFVPNIVVLEYLK 163 (163)
Q Consensus 137 Li~~PyGC~EQt~s~~~P~l~~~~YL~ 163 (163)
|++|||||+|||||+++|++|+++||+
T Consensus 1000 L~~~PyGC~EQ~~s~~~P~~~~~~yL~ 1026 (1676)
T 3cu7_A 1000 LTHLPKGSAEAELMSVVPVFYVFHYLE 1026 (1676)
T ss_dssp SSSCCSCSSHHHHTTSHHHHHHHHHHH
T ss_pred HhhCCCCcHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999999999984
No 7
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=99.95 E-value=9.4e-28 Score=214.37 Aligned_cols=161 Identities=22% Similarity=0.360 Sum_probs=135.3
Q ss_pred CCCCCCCCcEEEEEEEeeccceE-------EEEEEEcCCCeEEEEEEEEecccceEEEEEEEeecC---CCCeEEEEEEE
Q psy9572 3 DHKNVLRYNIREKVYLYEFEVFR-------RKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNL---AGDSMEGKLLV 72 (163)
Q Consensus 3 ~~~Ny~~~~~~v~V~l~~~~~~~-------~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~---~~d~v~~~l~V 72 (163)
.|+||++++++|+|+++.++.++ ++.++|++++++.++|+|+|.+.|.+.|+|+|.+.. .+|++++.|+|
T Consensus 175 ~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~a~~~~~v~f~i~~~~~G~~~i~v~A~~~~~~~~~D~v~~~l~V 254 (767)
T 4fxk_B 175 VLYNYLDKNLTVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVAFSVVPTAAAAVSLKVVARGSFEFPVGDAVSKVLQI 254 (767)
T ss_dssp EEEECSSSCEEEEEEECCCTTEECSSSSCCCEEEEECSSCEEECCEEEEECSCSEEEEEEEEEECTTCCCEEEEEEEEEE
T ss_pred EEEECCCCCEEEEEEEEecCCeEEecCCceeEEEEEcCCCeEEEEEEEEECccCcEEEEEEEEecCCCCccceEEEEEee
Confidence 47999999999999999877763 688999999999999999999999999999998753 47999999999
Q ss_pred eeCCeeEEEEEEEEEecCCCCceEEEEecCCCCCCcCCcce-EEEEEEeccCCCcc----cchhhhHhhhhhCCCCchhh
Q psy9572 73 KPEGETQYKNKAIFVDLRKNKTFSVNVTLDMPKNIVPGSEH-VEVSAVACKIGDLL----GPSIPNLANLIKMPFGCGEQ 147 (163)
Q Consensus 73 ~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~vpgS~~-~~v~v~~~~~~~~~----~~~~~~l~~Li~~PyGC~EQ 147 (163)
.|+|..++...+..+++.+..+++..++...+++.+|++.. ..+.+++++..++. +...+++++|++|||||+||
T Consensus 255 ~~~g~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~v~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~l~~Li~~P~GC~EQ 334 (767)
T 4fxk_B 255 EKEGAIHREELVYELNPLDHRGRTLEIPGNSDPNMIPDGDFNSYVRVTASDPLDTLGSEGALSPGGVASLLRLPRGCGEQ 334 (767)
T ss_dssp ECSSEEEEEEEEEECCSSSSSSSSSEEEEECCCCCTTBCSSCCCEEEEEESCHHHHHHHHTTSTTCGGGTSSCCCCSTTG
T ss_pred cCCCeeEEEEEEEEecccccCceEEEeecCCCccccccccccceEEEeeEEEEEEecchhhhhhhhHHHHHhccccchhh
Confidence 99999999999999998766566777777777777776653 34555543434443 33557999999999999999
Q ss_pred hhhhhhHHHHHHhhcC
Q psy9572 148 NMLNFVPNIVVLEYLK 163 (163)
Q Consensus 148 t~s~~~P~l~~~~YL~ 163 (163)
|||+++|++|+++||+
T Consensus 335 ~ms~~~p~i~v~~yl~ 350 (767)
T 4fxk_B 335 TMIYLAPTLAASRYLD 350 (767)
T ss_dssp GGGGTHHHHHHHHHHH
T ss_pred HHHhhhhhhhHHHHHH
Confidence 9999999999999984
No 8
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=99.89 E-value=6.2e-23 Score=162.15 Aligned_cols=127 Identities=27% Similarity=0.305 Sum_probs=107.9
Q ss_pred CCCCCCCcEEEEEEEeeccceE---------EEEEEEcCCCeEEEEEEEEecccceEEEEEEEe--ecCCCCeEEEEEEE
Q psy9572 4 HKNVLRYNIREKVYLYEFEVFR---------RKKLTIKANSGSTTTFVITPKELGYIGIKVTAT--SNLAGDSMEGKLLV 72 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~~---------~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~--~~~~~d~v~~~l~V 72 (163)
+|||++++++|+|+|..++.++ +|.++|++++++.++|+|+|.+.|.+.|+|+|. +...+|+++|.|+|
T Consensus 104 V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v~A~~~~~~~~D~v~k~L~V 183 (252)
T 3hrz_B 104 LHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEIKASVQEALWSDGVRKKLKV 183 (252)
T ss_dssp EEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSEEEEEEEEEEETTSSCEEEEEEEEEE
T ss_pred EEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCCcEEEEEEEEecCCCcCceEEEEEEE
Confidence 6899999999999999877653 678999999999999999999999999999995 45578999999999
Q ss_pred eeCCeeEEEEEEEEEecCCC---CceEEEEecCCCCCCcCCc-ceEEEEEEeccCCCcccchhhhH
Q psy9572 73 KPEGETQYKNKAIFVDLRKN---KTFSVNVTLDMPKNIVPGS-EHVEVSAVACKIGDLLGPSIPNL 134 (163)
Q Consensus 73 ~~~g~~~~~~~~~~l~~~~~---~~~~~~~~~~lp~~~vpgS-~~~~v~v~~~~~~~~~~~~~~~l 134 (163)
+|+|++++++++.+||+.+. +.++..+++.+|+++|||| .+++|++. ||++|++++|+
T Consensus 184 ~peG~~~~~~~s~~l~~~~~~~~~~~~~~i~~~~P~~~VpgS~~~~~vsv~----Gd~lg~~i~n~ 245 (252)
T 3hrz_B 184 VPEGVQKSIVTIVKLDPRAKGVGGTQLEVIKARKLDDRVPDTEIETKIIIQ----GDPVAQIIENS 245 (252)
T ss_dssp ECSSEEEEEEEEEEECHHHHCSSSEEEEEECCCCCCSBCTTCCEEEEEEEE----ECC--------
T ss_pred CCCCeEeEEEEEEEEccccCCCCCcEEEEEeCCCccccCCCCCeeEEEEEE----ccchHHHHhhc
Confidence 99999999999999999742 3467889999999999999 89999999 99999876543
No 9
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=99.59 E-value=2e-16 Score=130.73 Aligned_cols=67 Identities=28% Similarity=0.556 Sum_probs=31.3
Q ss_pred EEEecCCCCCCcCCcc-eEEEEEEeccCCCcccch----hhhHhhhhhCCCCchhhhhhhhhHHHHHHhhcC
Q psy9572 97 VNVTLDMPKNIVPGSE-HVEVSAVACKIGDLLGPS----IPNLANLIKMPFGCGEQNMLNFVPNIVVLEYLK 163 (163)
Q Consensus 97 ~~~~~~lp~~~vpgS~-~~~v~v~~~~~~~~~~~~----~~~l~~Li~~PyGC~EQt~s~~~P~l~~~~YL~ 163 (163)
.+|+.++|+++||||. .++|++.|..++|++|.. .++|++|++|||||+||+|++++|++++.+||+
T Consensus 2 ~~~~~~~p~~~vp~s~~~~~v~v~~~~~~d~~g~~~~~~~~~l~~L~~~P~Gc~EQ~~s~~~P~~~v~~~l~ 73 (367)
T 1hzf_A 2 LEIPGNSDPNMIPDGDFNSYVRVTASDPLDTLGSEGALSPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLD 73 (367)
T ss_dssp --------------------------------------CHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eEeCCCCccccCCCCCceEEEEEecCCchhhhhhhhccCHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999998 689999866667877642 589999999999999999999999999999973
No 10
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=99.06 E-value=3.7e-10 Score=79.19 Aligned_cols=78 Identities=10% Similarity=-0.002 Sum_probs=66.2
Q ss_pred CCCCCCCcEEEEEEEeeccce-----EEEEEEEcCCCeEEEEEEEEecccceEEEEEEEeecCCCCeEEEEEEEeeCCee
Q psy9572 4 HKNVLRYNIREKVYLYEFEVF-----RRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSMEGKLLVKPEGET 78 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~-----~~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~~~d~v~~~l~V~~~g~~ 78 (163)
||||+.+|++|+|.|..+..+ ..++.+|+++++++++|.+++ .|+++|+++|......|.....+.|.|++..
T Consensus 30 V~nyl~~~~~v~v~L~~s~~~~~~~~~~~t~Clc~~~~~t~~W~i~~--lg~vniTvsAea~~~~d~C~~e~~vvP~~~~ 107 (118)
T 3es6_B 30 VQTELKECMVVKTYLISSIPLQGAFNYKYTACLCDDNPKTFYWDFYT--NRTVQIAAVVDVIRELGICPDDAAVIPIKNN 107 (118)
T ss_dssp EEECCSSCEEEEEEEEESSCCCSGGGCEEEEEECSSSCEEEEEEECC--SSCEEEEEEEEECCCSSSSGGGCCCCCSSCC
T ss_pred EEecccceEEEEEEecCCcCEEccCCCcccEEecCCCceEEEEEEEe--CCeEEEEEEEEEecCcCccCCCceEcCCcCc
Confidence 799999999999999998887 367899999999999999987 5899999999986666777777778888777
Q ss_pred EEEEE
Q psy9572 79 QYKNK 83 (163)
Q Consensus 79 ~~~~~ 83 (163)
+....
T Consensus 108 ~d~~i 112 (118)
T 3es6_B 108 RFYTI 112 (118)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65443
No 11
>2icn_B Prolactin-inducible protein; beta-pleated sheet, complex, seminal fluid; HET: NAG BMA MAN P6G; 3.23A {Homo sapiens} PDB: 3es6_B*
Probab=98.55 E-value=3.5e-07 Score=63.87 Aligned_cols=54 Identities=11% Similarity=0.058 Sum_probs=48.0
Q ss_pred CCCCCCCcEEEEEEEeeccce-----EEEEEEEcCCCeEEEEEEEEecccceEEEEEEEee
Q psy9572 4 HKNVLRYNIREKVYLYEFEVF-----RRKKLTIKANSGSTTTFVITPKELGYIGIKVTATS 59 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~-----~~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~ 59 (163)
|+||+.+||.|+|+|..+.+| ...+-+|+++++++.+|.|.|.+ ++.|+++|..
T Consensus 30 VfNyL~~Ci~V~v~L~~S~~~~~~~~~~~s~ClC~~~~ktf~W~v~~~~--~Vnitv~ae~ 88 (118)
T 2icn_B 30 VQTELKECMVVKTYLISSIPLQGAFNYKYTACLCDDNPKTFYWDFYTNR--TVQIAAVVDV 88 (118)
T ss_dssp EEECCSSCEEEEEEEEESSCCCGGGGCEEEEEECSSSCEEEEEEECCSS--CEEEEEEEEE
T ss_pred EEeccCcCEEEEEEEcCCCCeEeecCCcCCEEECCCCCEEEEEEEEECc--EEEEEEEEEE
Confidence 689999999999999998876 34678999999999999999985 8888888864
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=92.63 E-value=0.64 Score=32.27 Aligned_cols=55 Identities=22% Similarity=0.250 Sum_probs=37.4
Q ss_pred CCCCCCc-EEEEEEEeeccce-EEEEEEEcCCCeEEEEEEEEecccceEEEEEEEee
Q psy9572 5 KNVLRYN-IREKVYLYEFEVF-RRKKLTIKANSGSTTTFVITPKELGYIGIKVTATS 59 (163)
Q Consensus 5 ~Ny~~~~-~~v~V~l~~~~~~-~~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~ 59 (163)
.|.-... -.++|.|..++.. ..+.+.|++|+++++.|...+...|...|++.+-.
T Consensus 42 ~N~G~~~a~~~~V~lyvng~~v~t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 42 KNLGGIGVPSTKVRVYINGTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECSSSCEEEEEEEEEETTEEEEEEEEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred EECCCCccCCcEEEEEECCEEEeeEEeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 3444333 3345555544443 45678899999999999999888888877776643
No 13
>3e1k_B Lactose regulatory protein LAC9; transctiption, repressor, trans-activation, carbohydrate metabolism, DNA-binding, galactose metabolism; 3.00A {Kluyveromyces lactis}
Probab=78.47 E-value=0.13 Score=24.22 Aligned_cols=9 Identities=33% Similarity=0.349 Sum_probs=7.3
Q ss_pred CCCCCCCCC
Q psy9572 1 MNDHKNVLR 9 (163)
Q Consensus 1 ~~~~~Ny~~ 9 (163)
|.||+||+=
T Consensus 10 mddvynylf 18 (22)
T 3e1k_B 10 MDDVYNYIF 18 (26)
T ss_pred HHHHHHHhc
Confidence 789999974
No 14
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=75.96 E-value=12 Score=25.19 Aligned_cols=48 Identities=6% Similarity=0.143 Sum_probs=33.3
Q ss_pred EEEE-EEcCCCeEEEEEEEEec-ccceEEEEEEEeec-------CCCCeEEEEEEEe
Q psy9572 26 RKKL-TIKANSGSTTTFVITPK-ELGYIGIKVTATSN-------LAGDSMEGKLLVK 73 (163)
Q Consensus 26 ~~~v-~v~~~~~~~v~f~v~~~-~~G~~~i~v~a~~~-------~~~d~v~~~l~V~ 73 (163)
.+.+ .|.+|.++.+.|...+. ..|...|++.+-.. .......+.+.+.
T Consensus 51 t~~v~~LaaG~s~tv~~~w~~~~~~G~ytl~a~VD~~n~i~E~nE~NN~~t~~~~~~ 107 (114)
T 2l0d_A 51 TQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVDPENAVNEGNESNNTLTALVGTL 107 (114)
T ss_dssp EEEESCBCBTCEEEEEEEEECCCSCSEEEEEEEECTTCSSCCSSGGGSEEEEEEEEC
T ss_pred ceecccccCCCEEEEEEEEeecCcCceEEEEEEECCCCceecccCCcceeeeeehhh
Confidence 4455 58899999999999988 58998888877532 1234555555553
No 15
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=71.34 E-value=24 Score=31.22 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=38.7
Q ss_pred CCCCCCCcEEEEEEEeeccce-----------EEEEEEEcCCCeEEEEEEEEecc-----cceEEEEEEEee
Q psy9572 4 HKNVLRYNIREKVYLYEFEVF-----------RRKKLTIKANSGSTTTFVITPKE-----LGYIGIKVTATS 59 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~-----------~~~~v~v~~~~~~~v~f~v~~~~-----~G~~~i~v~a~~ 59 (163)
+.|.+++..++++.+.+.-.+ ....++|+|++.+.+++.|...+ ..+..|++.|..
T Consensus 494 ~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y~~Y~~~L~d~~~i~~~a~~ 565 (695)
T 1g0d_A 494 VKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHYDDYVRCVSEHHLIRVKALL 565 (695)
T ss_dssp EEECSSSCEEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEE
T ss_pred EEECCCCCEEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECHHHHhhhcccCCeEEEEEEE
Confidence 457777777777777763332 35679999999999999999863 334455555443
No 16
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=68.64 E-value=12 Score=24.59 Aligned_cols=32 Identities=19% Similarity=0.092 Sum_probs=27.6
Q ss_pred EEcCCCeEEEEEEEEecccceEEEEEEEeecC
Q psy9572 30 TIKANSGSTTTFVITPKELGYIGIKVTATSNL 61 (163)
Q Consensus 30 ~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~ 61 (163)
.|++|+...+.|.+.|.+.|.-.+.+.-.+..
T Consensus 58 ~v~pg~~~~~~~~~~P~~~G~~~L~a~f~s~~ 89 (102)
T 2xzz_A 58 DIGGNETVTLRQSFVPVRPGPRQLIASLDSPQ 89 (102)
T ss_dssp CBCTTCEEEEEEEECCCSCSSCCCEEEEECGG
T ss_pred cCCCCCEEEEEEEEecCcccceEEEEEEECCc
Confidence 58999999999999999999988887777653
No 17
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=66.31 E-value=50 Score=27.02 Aligned_cols=35 Identities=6% Similarity=-0.001 Sum_probs=23.9
Q ss_pred EEEEEEcCCCeEEEEEEEEecccceEEEEEEEeec
Q psy9572 26 RKKLTIKANSGSTTTFVITPKELGYIGIKVTATSN 60 (163)
Q Consensus 26 ~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~ 60 (163)
.+..+|..++...+.+.+.-.+.|...+.+++...
T Consensus 341 ~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~~ 375 (391)
T 2xwx_A 341 SWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDR 375 (391)
T ss_dssp EEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEET
T ss_pred eeeEEEcCCCcceEEEEccCCCCccEEEEEEEECC
Confidence 44556766666667777777777777777777654
No 18
>3bts_E Regulatory protein GAL4; eukaryotic transcription complex, NAD, rossmann fold, acetylation, carbohydrate metabolism, DNA-binding; HET: NAD; 2.70A {Saccharomyces cerevisiae}
Probab=64.15 E-value=0.3 Score=23.90 Aligned_cols=10 Identities=40% Similarity=0.262 Sum_probs=7.1
Q ss_pred CCCCCCCCCC
Q psy9572 1 MNDHKNVLRY 10 (163)
Q Consensus 1 ~~~~~Ny~~~ 10 (163)
|.|++||+=.
T Consensus 8 MDDvyNylFd 17 (26)
T 3bts_E 8 MDDVYNYLFD 17 (26)
T ss_pred HHHHHHHhcC
Confidence 6788888643
No 19
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=62.20 E-value=84 Score=27.77 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=45.7
Q ss_pred CCCCCCCcEEEEEEEeeccce-----------EEEEEEEcCCCeEEEEEEEEecc-----cceEEEEEEEee--cCCCC-
Q psy9572 4 HKNVLRYNIREKVYLYEFEVF-----------RRKKLTIKANSGSTTTFVITPKE-----LGYIGIKVTATS--NLAGD- 64 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~-----------~~~~v~v~~~~~~~v~f~v~~~~-----~G~~~i~v~a~~--~~~~d- 64 (163)
++|.+++...+++.+.+.-.+ ....++|+|++.+.+++.|...+ ..+..|++.|.. .....
T Consensus 504 ~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~~ 583 (692)
T 1vjj_A 504 LKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISYAQYERYLKSDNMIRITAVCKVPDESEV 583 (692)
T ss_dssp EEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECHHHHHTTCCTTCEEEEEEEEECTTSCCE
T ss_pred EEECCCCCEEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECHHHHhhhcccCCeEEEEEEEEECCCceE
Confidence 457777777787777763332 24579999999999999999863 234445554443 32222
Q ss_pred eEEEEEEEeeCCe
Q psy9572 65 SMEGKLLVKPEGE 77 (163)
Q Consensus 65 ~v~~~l~V~~~g~ 77 (163)
..++.|.++..-+
T Consensus 584 ~~~~di~l~~P~l 596 (692)
T 1vjj_A 584 VVERDIILDNPTL 596 (692)
T ss_dssp EEEEEEECBCCCE
T ss_pred EEEEEEEEcCCCE
Confidence 3345555544333
No 20
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=61.62 E-value=43 Score=29.55 Aligned_cols=75 Identities=17% Similarity=0.048 Sum_probs=46.3
Q ss_pred CCCCCCCcEEEEEEEeeccce------------EEEEEEEcCCCeEEEEEEEEecc-----cceEEEEEEE--eecCCCC
Q psy9572 4 HKNVLRYNIREKVYLYEFEVF------------RRKKLTIKANSGSTTTFVITPKE-----LGYIGIKVTA--TSNLAGD 64 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~------------~~~~v~v~~~~~~~v~f~v~~~~-----~G~~~i~v~a--~~~~~~d 64 (163)
++|.+++...+++.+.+.-.+ ....++|+|++.+.+++.|...+ ..+..|++.| .......
T Consensus 495 ~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~ 574 (687)
T 2q3z_A 495 ITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINS 574 (687)
T ss_dssp EEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEEEETTTTE
T ss_pred EEECCCCCEEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECHHHHhhhccCCCEEEEEEEEEECCCCe
Confidence 357778888888877763322 24468999999999999999863 2344455544 4432222
Q ss_pred --eEEEEEEEeeCCee
Q psy9572 65 --SMEGKLLVKPEGET 78 (163)
Q Consensus 65 --~v~~~l~V~~~g~~ 78 (163)
..++.|.++..-+.
T Consensus 575 ~~~~~~di~l~~P~l~ 590 (687)
T 2q3z_A 575 YLLAERDLYLENPEIK 590 (687)
T ss_dssp EEEEEEEEECBCCCCE
T ss_pred EEEEEEEEEEeCCCEE
Confidence 33456665544443
No 21
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=57.94 E-value=38 Score=22.39 Aligned_cols=55 Identities=5% Similarity=0.016 Sum_probs=37.1
Q ss_pred CCCCCCcEEEEEEEeeccceE---EEEEEEcCCCeEEEEEEEEecc----cceEEEEEEEee
Q psy9572 5 KNVLRYNIREKVYLYEFEVFR---RKKLTIKANSGSTTTFVITPKE----LGYIGIKVTATS 59 (163)
Q Consensus 5 ~Ny~~~~~~v~V~l~~~~~~~---~~~v~v~~~~~~~v~f~v~~~~----~G~~~i~v~a~~ 59 (163)
.|-+.++..+++.+...+++. .+.+.|+|++...+++.|.... .|...|+++...
T Consensus 40 ~Nkt~~~~~~~l~v~g~~~l~~~g~~~i~v~~g~~~~~~v~v~~~~~~~~~~~~~i~f~v~~ 101 (118)
T 2r39_A 40 INKTQQVQEYNLDVKGLNDVSWYGKQTIQVEPGEVLNLPMSLGADPDKLNSAITTIQFILTD 101 (118)
T ss_dssp EECSSSCEEEEEEEESCSSCEEESCCEEEECTTCEEEEEEEEEECGGGCSSSEEEEEEEEEE
T ss_pred EECCCCCEEEEEEEeCCcccEEeCCCcEEECCCCEEEEEEEEEEChHHccCCceeEEEEEEe
Confidence 477788888888887643342 2358999999888888777642 455566555553
No 22
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=56.84 E-value=90 Score=27.59 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=35.6
Q ss_pred EEcCCCeEEEEEEEEecccceEEEEEEEeecCCCCeE-EEEEEEee
Q psy9572 30 TIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSM-EGKLLVKP 74 (163)
Q Consensus 30 ~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~~~d~v-~~~l~V~~ 74 (163)
.|+||+...+.|.++|.+.|.-.|.+.-......|.- .+.+.|.+
T Consensus 638 ~v~Pg~~~~~~~~~~P~~~G~r~L~a~f~s~~l~~v~G~~~v~V~~ 683 (695)
T 1g0d_A 638 AVAPSGKVSVKLSFSPMRTGVRKLLVDFDSDRLKDVKGVTTVVVHK 683 (695)
T ss_dssp EECTTCEEEEEEEECCSSCEEEEEEEEEECSSCCCEEEEEEEEEEC
T ss_pred CcCCCCEEEEEEEEEcCCccceEEEEEEECCcccCcEeEEEEEEee
Confidence 6899999999999999999999999988887655522 14555554
No 23
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=54.25 E-value=1.2e+02 Score=27.01 Aligned_cols=70 Identities=23% Similarity=0.110 Sum_probs=46.1
Q ss_pred CCCCCCcEE-EEEEEeeccceEEEE---EEEcCCCeEEEEEEEEecccceEEEEEEEeecCCCCeE-EEEEEEee
Q psy9572 5 KNVLRYNIR-EKVYLYEFEVFRRKK---LTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSM-EGKLLVKP 74 (163)
Q Consensus 5 ~Ny~~~~~~-v~V~l~~~~~~~~~~---v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~~~d~v-~~~l~V~~ 74 (163)
+|=|+..++ ..++++.++-...++ =.|+||+...+.|.++|.+.|...|.+.-......|.- .+.+.|.+
T Consensus 653 ~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~a~f~s~~l~~v~G~~~v~V~~ 727 (731)
T 1ex0_A 653 TNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQIQR 727 (731)
T ss_dssp ECCSSSCEEEEEEEEEETTTEEEEEEEEEEECTTCEEEEEEEECCSSCEEEEEEEEEECSSCCCEEEEEEEEEBC
T ss_pred ECCCCCcccceEEEEECCCCCceeeEecCccCCCCEEEEEEEEEeccccceEEEEEEECCcccCcEeEEEEEEcc
Confidence 344555544 233455544443333 26999999999999999999999999988887655522 14444543
No 24
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=34.08 E-value=24 Score=25.60 Aligned_cols=20 Identities=20% Similarity=0.444 Sum_probs=14.7
Q ss_pred chhhhHhhhhhCCCCchhhh
Q psy9572 129 PSIPNLANLIKMPFGCGEQN 148 (163)
Q Consensus 129 ~~~~~l~~Li~~PyGC~EQt 148 (163)
.-++.|-++++||.||.=-|
T Consensus 104 ~G~dsLlSivqMP~Gvpvat 123 (173)
T 4grd_A 104 KGVDSLHSIVQMPKGVPVAT 123 (173)
T ss_dssp TTHHHHHHHHCCCTTSCCEE
T ss_pred CchhHHHHHHhCCCCCCceE
Confidence 34467778899999996544
No 25
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.00 E-value=88 Score=19.78 Aligned_cols=22 Identities=14% Similarity=0.175 Sum_probs=10.7
Q ss_pred EEcCCCeEEEEEEEEecccceE
Q psy9572 30 TIKANSGSTTTFVITPKELGYI 51 (163)
Q Consensus 30 ~v~~~~~~~v~f~v~~~~~G~~ 51 (163)
.|++|++..+.+...|...|..
T Consensus 65 ~i~pg~~~~i~V~f~~~~~g~f 86 (112)
T 2e6j_A 65 IIEPSGVQAIQISFSSIILGNF 86 (112)
T ss_dssp EECTTBCCEEEEEECCCCCEEE
T ss_pred EECCCCEEEEEEEEECCCcceE
Confidence 4455555555555554444443
No 26
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=29.89 E-value=2.1e+02 Score=25.20 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=31.2
Q ss_pred EEcCCCeEEEEEEEEecccceEEEEEEEeecCCCC
Q psy9572 30 TIKANSGSTTTFVITPKELGYIGIKVTATSNLAGD 64 (163)
Q Consensus 30 ~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~~~d 64 (163)
.|+||+...+.|.++|.+.|...|.+.-......|
T Consensus 647 ~v~pg~~~~~~~~~~P~~~G~r~L~a~f~s~~l~~ 681 (692)
T 1vjj_A 647 TLGPKERSRVRFDILPSRSGTKQLLADFSCNKFPA 681 (692)
T ss_dssp CBCTTCEEEEEEEECCCSCEEEEEEEEEECSSSTT
T ss_pred ccCCCCEEEEEEEEEeccccceEEEEEEECCcccC
Confidence 69999999999999999999999999888876555
No 27
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=28.33 E-value=90 Score=24.85 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=18.6
Q ss_pred EEEEEEcCCCeEEEEEEEEec-ccceEEEEEE
Q psy9572 26 RKKLTIKANSGSTTTFVITPK-ELGYIGIKVT 56 (163)
Q Consensus 26 ~~~v~v~~~~~~~v~f~v~~~-~~G~~~i~v~ 56 (163)
...+++++++..++.....-. +.+++.+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (343)
T 3e38_A 296 FRDMTLKPHTRYTVRIGFKQGIKGGDVNFEVT 327 (343)
T ss_dssp CSEEEECTTEEEEEEEEECTTCCCCEEEEEEE
T ss_pred CceEEecCCCeEEEEEeccccccceEEEEEee
Confidence 456899998887776544432 3444555544
No 28
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=27.79 E-value=1.9e+02 Score=25.53 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=31.0
Q ss_pred EEcCCCeEEEEEEEEecccceEEEEEEEeecCCCC
Q psy9572 30 TIKANSGSTTTFVITPKELGYIGIKVTATSNLAGD 64 (163)
Q Consensus 30 ~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~~~~~d 64 (163)
.|+||+...+.|.++|.+.|...|.+.-......|
T Consensus 641 ~v~pg~~~~~~~~~~P~~~G~~~L~a~f~s~~l~~ 675 (687)
T 2q3z_A 641 PVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKA 675 (687)
T ss_dssp CBCTTCEEEEEEEECCCSSSCEEEEEEEECSSSCC
T ss_pred CcCCCCEEEEEEEEEeccccceEEEEEEEcCcccC
Confidence 68999999999999999999999998888776554
No 29
>2d42_A Non-toxic crystal protein; parasporin, bacterial toxin, beta-pore-forming toxin, parasporal inclusion, hinge-bending motion; 2.07A {Bacillus thuringiensis}
Probab=27.44 E-value=2.1e+02 Score=21.89 Aligned_cols=34 Identities=3% Similarity=0.057 Sum_probs=24.7
Q ss_pred EEEEEEcCCCeEEEEEEEEec-ccceEEEEEEEee
Q psy9572 26 RKKLTIKANSGSTTTFVITPK-ELGYIGIKVTATS 59 (163)
Q Consensus 26 ~~~v~v~~~~~~~v~f~v~~~-~~G~~~i~v~a~~ 59 (163)
+|.+.|||.++..+.+.+.-. -.|.+.+.....+
T Consensus 141 SQ~I~VPP~SrVe~t~ii~kg~~~~pv~L~~~v~G 175 (249)
T 2d42_A 141 SQTIRVPPFHRATGVYTLEQGAFEKMTVLECVVSG 175 (249)
T ss_dssp EEEEEECTTEEEEEEEEEEEEEEEEEEEEEEEEEC
T ss_pred ccceEeCCCCEEEEEEEEEecceeeEEEEEEEEec
Confidence 678999999999998887753 3555555555554
No 30
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.50 E-value=57 Score=21.41 Aligned_cols=45 Identities=13% Similarity=0.111 Sum_probs=26.1
Q ss_pred CCCCCCcEEEEEEEeeccceE--EEEEEEcCCCeEEEEEEEEecccceE
Q psy9572 5 KNVLRYNIREKVYLYEFEVFR--RKKLTIKANSGSTTTFVITPKELGYI 51 (163)
Q Consensus 5 ~Ny~~~~~~v~V~l~~~~~~~--~~~v~v~~~~~~~v~f~v~~~~~G~~ 51 (163)
+|..+.+..++ +.....|. ...-.|++|+...+.+...|.+.|..
T Consensus 50 ~N~g~~~~~f~--~~~~~~F~i~P~~g~L~pg~~~~i~V~F~P~~~g~~ 96 (122)
T 2ys4_A 50 RNIGNKNAVFH--IKTCRPFSIEPAIGTLNVGESMQLEVEFEPQSVGDH 96 (122)
T ss_dssp ECCSSSCEEEE--EECCTTEEEESSEEEECTTCEEEEEEEECCSSSBCC
T ss_pred EECCCCCEEEE--EecCCCeEEECCcCEECCCCEEEEEEEEEcCCCccE
Confidence 45444444433 33333442 22467788888888888888776654
No 31
>3ech_C 25-MER fragment of protein ARMR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa}
Probab=24.13 E-value=21 Score=16.97 Aligned_cols=7 Identities=29% Similarity=-0.064 Sum_probs=5.9
Q ss_pred CCchhhh
Q psy9572 142 FGCGEQN 148 (163)
Q Consensus 142 yGC~EQt 148 (163)
.||.||-
T Consensus 2 r~~te~l 8 (25)
T 3ech_C 2 RDYTEQL 8 (26)
T ss_dssp CCHHHHH
T ss_pred CcHHHHH
Confidence 5899996
No 32
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=24.06 E-value=1.7e+02 Score=19.66 Aligned_cols=30 Identities=13% Similarity=0.137 Sum_probs=23.8
Q ss_pred EEEEEcCCCeEEEEEEEEecccceEEEEEE
Q psy9572 27 KKLTIKANSGSTTTFVITPKELGYIGIKVT 56 (163)
Q Consensus 27 ~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~ 56 (163)
+.+.|.+|....++|.+++...+.+.+++.
T Consensus 65 q~i~l~~G~~Y~lsf~aka~~~~~i~v~l~ 94 (155)
T 1gui_A 65 QWIGLYRGKTYTISFKAKADTPRPINVKIL 94 (155)
T ss_dssp EEEECCTTCEEEEEEEEEESSCEEEEEEEE
T ss_pred ccEEeCCCCEEEEEEEEEeCCCCcEEEEEE
Confidence 578999999999999999987665555544
No 33
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=22.53 E-value=1.9e+02 Score=19.64 Aligned_cols=24 Identities=8% Similarity=0.054 Sum_probs=16.5
Q ss_pred EEEEEEEEecccceEEEEEEEeec
Q psy9572 37 STTTFVITPKELGYIGIKVTATSN 60 (163)
Q Consensus 37 ~~v~f~v~~~~~G~~~i~v~a~~~ 60 (163)
..-.|.++|.+.|+..|++.=...
T Consensus 91 G~~~w~f~A~~~G~~~i~~~Y~Rp 114 (132)
T 2wgn_B 91 GESTWRFRVAASGDDRLELVYRRP 114 (132)
T ss_dssp CCEEEEEEECSCEEEEEEEEEECT
T ss_pred ceEEEEEEEcCCceEEEEEEEECc
Confidence 345677778788887777765544
No 34
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=22.40 E-value=1.9e+02 Score=19.80 Aligned_cols=35 Identities=11% Similarity=0.032 Sum_probs=27.7
Q ss_pred EEEEEEEcCCCeEEEEEEEEecccceEEEEEEEee
Q psy9572 25 RRKKLTIKANSGSTTTFVITPKELGYIGIKVTATS 59 (163)
Q Consensus 25 ~~~~v~v~~~~~~~v~f~v~~~~~G~~~i~v~a~~ 59 (163)
...-+.|.+|....++|.+++.....+.+.+...+
T Consensus 48 ~q~gi~L~~G~tY~lsF~A~as~~r~i~v~i~~~~ 82 (149)
T 1gu3_A 48 VLNGVAIEEGTTYTLRYTATASTDVTVRALVGQNG 82 (149)
T ss_dssp EEEEECBCTTCEEEEEEEEEESSCEECEEEEEESS
T ss_pred EeCCEEEcCCCEEEEEEEEEeCCCcEEEEEEecCC
Confidence 34569999999999999999988777777765443
No 35
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=22.32 E-value=1.7e+02 Score=19.25 Aligned_cols=40 Identities=15% Similarity=0.025 Sum_probs=16.6
Q ss_pred CCCCCCcEEEEEEEeeccceEEE--EEEEcCCCeEEEEEEEE
Q psy9572 5 KNVLRYNIREKVYLYEFEVFRRK--KLTIKANSGSTTTFVIT 44 (163)
Q Consensus 5 ~Ny~~~~~~v~V~l~~~~~~~~~--~v~v~~~~~~~v~f~v~ 44 (163)
+|-+++.+.++|+......|.-+ .-.|+||++..+.+...
T Consensus 36 ~N~s~~~vaFKVKTT~p~~y~VrP~~G~i~P~~s~~v~V~~~ 77 (128)
T 1z9l_A 36 QNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVMLQ 77 (128)
T ss_dssp ECCSSSCEEEEEEESCGGGEEEESCEEEECTTCEEEEEEEEC
T ss_pred ECCCCCeEEEEEECCCCCceEEeCCCcEECCCCeEEEEEEEC
Confidence 34444444444444444443221 22344444444444433
No 36
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=22.12 E-value=4.2e+02 Score=23.55 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=47.0
Q ss_pred CCCCCCCcEEEEEEEeeccce-----------EEEEEEEcCCCeEEEEEEEEecc-----cceEEEEEEE--eecCCCC-
Q psy9572 4 HKNVLRYNIREKVYLYEFEVF-----------RRKKLTIKANSGSTTTFVITPKE-----LGYIGIKVTA--TSNLAGD- 64 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~-----------~~~~v~v~~~~~~~v~f~v~~~~-----~G~~~i~v~a--~~~~~~d- 64 (163)
++|.+++...+++.+.+...+ ....++|+|++.+.+++.|...+ ..+..|++.| .......
T Consensus 539 ~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~~ 618 (731)
T 1ex0_A 539 FRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDV 618 (731)
T ss_dssp EEECSSSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEEEETTTCCE
T ss_pred EEECCCCCEEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECHHHHhhhccCCCEEEEEEEEEECCCCeE
Confidence 467778888888877763332 24579999999999999999863 2344455544 4432222
Q ss_pred -eEEEEEEEeeCCee
Q psy9572 65 -SMEGKLLVKPEGET 78 (163)
Q Consensus 65 -~v~~~l~V~~~g~~ 78 (163)
..++.|.++..-+.
T Consensus 619 ~~~~~di~l~~P~l~ 633 (731)
T 1ex0_A 619 LAKQKSTVLTIPEII 633 (731)
T ss_dssp EEEEEEEECBCCCCE
T ss_pred EEEEEEEEEeCCCEE
Confidence 33466665544443
No 37
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=21.31 E-value=2.1e+02 Score=19.74 Aligned_cols=43 Identities=16% Similarity=0.035 Sum_probs=29.3
Q ss_pred CCCCCCCcEEEEEEEeeccceEEE--EEEEcCCCeEEEEEEEEec
Q psy9572 4 HKNVLRYNIREKVYLYEFEVFRRK--KLTIKANSGSTTTFVITPK 46 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~~~~--~v~v~~~~~~~v~f~v~~~ 46 (163)
++|-+++.+.++|+......|+-+ .-.|++|+...+.+.+.+.
T Consensus 43 L~N~s~~~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 43 LTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASIDIIVSPHGG 87 (152)
T ss_dssp EEBCSSSCEEEEEEESCTTTEEEESSEEEECTTCEEEEEEEECSS
T ss_pred EEcCCCCeEEEEEECCCCCceeecCCCcEECCCCeEEEEEEecCc
Confidence 457777777777777776666433 3467777777777777664
No 38
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=21.06 E-value=1.9e+02 Score=19.19 Aligned_cols=43 Identities=5% Similarity=-0.144 Sum_probs=27.1
Q ss_pred CCCCCCCcEEEEEEEeeccceEEE--EEEEcCCCeEEEEEEEEec
Q psy9572 4 HKNVLRYNIREKVYLYEFEVFRRK--KLTIKANSGSTTTFVITPK 46 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~~~~--~v~v~~~~~~~v~f~v~~~ 46 (163)
+.|-+++.+-++|+......|+-+ .-.|++|++..+.+.+.+.
T Consensus 33 l~N~s~~~vaFKVKTT~p~~y~VrP~~Gii~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 33 ITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKEKVLMAVSCDTF 77 (126)
T ss_dssp EEECSSSCEEEEEEESCTTTEEEESCEEEECTTCEEEEEEEECCC
T ss_pred EECCCCCeEEEEEEcCCCCcEEEECCCeEECCCCEEEEEEEecCC
Confidence 356666677777777666666433 3457777776666666653
No 39
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=20.88 E-value=78 Score=23.78 Aligned_cols=60 Identities=15% Similarity=0.197 Sum_probs=31.9
Q ss_pred eEEEEEEEeecCCCCeEEEEEEEeeCCeeEEEEEEEEEecCCCCceEEEEecCCCCCCcCC
Q psy9572 50 YIGIKVTATSNLAGDSMEGKLLVKPEGETQYKNKAIFVDLRKNKTFSVNVTLDMPKNIVPG 110 (163)
Q Consensus 50 ~~~i~v~a~~~~~~d~v~~~l~V~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~vpg 110 (163)
++.|++..... .++.+...|--.+.....++..+.++--.+.-...++|++.||.+..++
T Consensus 48 NIeV~vevr~~-~G~~i~~~I~~~sg~~~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~ 107 (220)
T 3l4c_A 48 NVEVTVSVYDE-DGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAIPIEDVNR 107 (220)
T ss_dssp CEEEEEEEEET-TSCBCCSCEECTTCCSCBSCEECCCCTTCSSCCCCEEEEEEECTTSSTT
T ss_pred eEEEEEEEEcC-CCCCcccCEEcCCCCCCceeEEEEEEEcCCCCCceEeEEEeeChhhcCC
Confidence 56666666654 2344544554443334444444444321222246778888888776654
No 40
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.24 E-value=2.1e+02 Score=19.44 Aligned_cols=42 Identities=17% Similarity=0.064 Sum_probs=25.1
Q ss_pred CCCCCCCcEEEEEEEeeccceEEE--EEEEcCCCeEEEEEEEEe
Q psy9572 4 HKNVLRYNIREKVYLYEFEVFRRK--KLTIKANSGSTTTFVITP 45 (163)
Q Consensus 4 ~~Ny~~~~~~v~V~l~~~~~~~~~--~v~v~~~~~~~v~f~v~~ 45 (163)
++|-+++.+.++|+......|+-+ .-.|++++...+.+.+.+
T Consensus 39 L~N~s~~~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~v~V~l~~ 82 (147)
T 2cri_A 39 LQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVMLQP 82 (147)
T ss_dssp EECCSSSCEEEEEEESCTTSEEEESSEEECCTTCEEEEEEEECC
T ss_pred EECCCCCcEEEEEECCCCccEEEcCCCcEECCCCeEEEEEEECC
Confidence 356666666677766666665432 345666666666666555
No 41
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=20.07 E-value=2.2e+02 Score=25.00 Aligned_cols=22 Identities=9% Similarity=0.166 Sum_probs=18.2
Q ss_pred EEEE-EEcCCCeEEEEEEEEecc
Q psy9572 26 RKKL-TIKANSGSTTTFVITPKE 47 (163)
Q Consensus 26 ~~~v-~v~~~~~~~v~f~v~~~~ 47 (163)
.+++ .|+||++++|.|.+.+..
T Consensus 656 F~kv~~L~pGes~~V~~~l~~~~ 678 (721)
T 2x41_A 656 FHKTRLLNPGESEEVVLEIPVRD 678 (721)
T ss_dssp EEECCCBCTTCEEEEEEEEEGGG
T ss_pred ccccccCCCCCeEEEEEEECHHH
Confidence 5678 899999999999998754
No 42
>1nc7_A Hypothetical protein TM1070; structural genomics, molecular propeller, PSI, protein structure initiative; 1.55A {Thermotoga maritima} SCOP: b.123.1.1
Probab=20.05 E-value=1.4e+02 Score=20.64 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=23.4
Q ss_pred CCCCCc--EEEEEEEeeccceEEEEEEEcCCCeEEEEE
Q psy9572 6 NVLRYN--IREKVYLYEFEVFRRKKLTIKANSGSTTTF 41 (163)
Q Consensus 6 Ny~~~~--~~v~V~l~~~~~~~~~~v~v~~~~~~~v~f 41 (163)
|-.+++ +++++.++..+.... .++|+++..+.+.|
T Consensus 54 N~gd~dA~i~it~yFeDRdPvgp-~v~V~arRtrHlR~ 90 (138)
T 1nc7_A 54 NTGDETAKIRITFLFEDSKPVVH-EVEISPMKSLHLRL 90 (138)
T ss_dssp ECSSSCEEEEEEEEESSSCCEEE-EEEECTTEEEEEEG
T ss_pred ecCCCCcEEEEEEEEccCCCCCc-cEEEcCceEEEEEe
Confidence 444444 556666666777666 88888887776655
Done!