Your job contains 1 sequence.
>psy9573
MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNIPIFSKIIIGKIINIIKHPDID
NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY
GLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGIA
REISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWMKI
RLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETIKISNDLIIK
IDKNIGIISDNFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTES
SYRFERGIDFSKTIKCLERVTNLIIEICGTSSSKISQIDDQIINIPVRKEIKVRSERVIK
ILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLEIEEDIIEEIIRIYGFENIP
ISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFSQNINNYPIEL
LNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYK
ELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSAL
IFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQIPNYIQISKFPNVVRDIV
FIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLKDNEKSFAFRCILQDPK
KTLKNNIINNAINALINSVCKNFNAKLRN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9573
(809 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CBU_1321 - symbol:CBU_1321 "phenylalanyl-tRNA sy... 1102 1.2e-111 1
UNIPROTKB|P07395 - symbol:pheT "phenylalanyl-tRNA synthet... 1066 8.1e-108 1
TIGR_CMR|CPS_2995 - symbol:CPS_2995 "phenylalanyl-tRNA sy... 1050 4.0e-106 1
UNIPROTKB|Q9KSN6 - symbol:pheT "Phenylalanine--tRNA ligas... 1048 6.5e-106 1
TIGR_CMR|VC_1220 - symbol:VC_1220 "phenylalanyl-tRNA synt... 1048 6.5e-106 1
TIGR_CMR|SO_2086 - symbol:SO_2086 "phenylalanyl-tRNA synt... 1046 1.1e-105 1
TIGR_CMR|CHY_1570 - symbol:CHY_1570 "phenylalanyl-tRNA sy... 803 6.0e-80 1
TIGR_CMR|BA_4803 - symbol:BA_4803 "phenylalanyl-tRNA synt... 787 3.0e-78 1
TIGR_CMR|GSU_1520 - symbol:GSU_1520 "phenylalanyl-tRNA sy... 717 7.7e-71 1
TIGR_CMR|DET_0366 - symbol:DET_0366 "phenylalanyl-tRNA sy... 687 1.2e-67 1
TIGR_CMR|ECH_0434 - symbol:ECH_0434 "phenylalanyl-tRNA sy... 663 4.1e-65 1
TIGR_CMR|SPO_3489 - symbol:SPO_3489 "phenylalanyl-tRNA sy... 607 3.5e-59 1
TIGR_CMR|NSE_0426 - symbol:NSE_0426 "putative phenylalany... 277 3.5e-55 3
TIGR_CMR|APH_0305 - symbol:APH_0305 "phenylalanyl-tRNA sy... 537 1.1e-50 1
UNIPROTKB|P94985 - symbol:pheT "Phenylalanine--tRNA ligas... 377 1.8e-31 1
TIGR_CMR|CJE_0975 - symbol:CJE_0975 "phenylalanyl-tRNA sy... 369 1.1e-30 1
UNIPROTKB|Q9NSD9 - symbol:FARSB "Phenylalanine--tRNA liga... 224 1.5e-16 3
UNIPROTKB|F5H6Y1 - symbol:FARSB "Phenylalanine--tRNA liga... 224 2.4e-16 2
MGI|MGI:1346035 - symbol:Farsb "phenylalanyl-tRNA synthet... 216 2.8e-16 3
UNIPROTKB|Q5ZJ61 - symbol:FARSB "Uncharacterized protein"... 214 2.9e-16 3
RGD|1303210 - symbol:Farsb "phenylalanyl-tRNA synthetase,... 215 3.6e-16 3
UNIPROTKB|A8E4P2 - symbol:FARSB "Uncharacterized protein"... 213 1.2e-15 3
UNIPROTKB|F6XQ20 - symbol:FARSB "Uncharacterized protein"... 210 1.1e-14 3
UNIPROTKB|E2R6K4 - symbol:FARSB "Uncharacterized protein"... 207 2.4e-14 3
ZFIN|ZDB-GENE-021206-2 - symbol:farsb "phenylalanyl-tRNA ... 190 2.8e-13 3
WB|WBGene00001498 - symbol:fars-3 species:6239 "Caenorhab... 164 1.2e-11 3
FB|FBgn0039175 - symbol:CG5706 species:7227 "Drosophila m... 163 1.7e-09 2
DICTYBASE|DDB_G0277303 - symbol:phesB "phenylalanine-tRNA... 144 3.5e-07 2
TAIR|locus:2030290 - symbol:AT1G72550 species:3702 "Arabi... 140 4.1e-07 3
ASPGD|ASPL0000011475 - symbol:AN4086 species:162425 "Emer... 131 1.9e-06 2
POMBASE|SPAC23A1.12c - symbol:frs1 "phenylalanine-tRNA li... 118 8.6e-06 3
UNIPROTKB|Q97NV1 - symbol:SP_1910 "Putative uncharacteriz... 129 8.7e-06 1
GENEDB_PFALCIPARUM|PF11_0051 - symbol:PF11_0051 "phenylal... 129 3.7e-05 2
UNIPROTKB|Q8IIW2 - symbol:PF11_0051 "Phenylalanyl-tRNA sy... 129 3.7e-05 2
UNIPROTKB|Q71Z60 - symbol:LMOf2365_1629 "tRNA-binding dom... 123 4.4e-05 1
UNIPROTKB|Q81JE1 - symbol:BAS4587 "Putative tRNA binding ... 122 5.6e-05 1
TIGR_CMR|BA_4943 - symbol:BA_4943 "tRNA binding domain pr... 122 5.6e-05 1
UNIPROTKB|F1SR70 - symbol:LOC100524650 "Uncharacterized p... 126 0.00018 2
SGD|S000004050 - symbol:FRS1 "Beta subunit of cytoplasmic... 126 0.00045 2
CGD|CAL0002521 - symbol:FRS1 species:5476 "Candida albica... 116 0.00062 2
UNIPROTKB|Q5A993 - symbol:FRS1 "Putative uncharacterized ... 116 0.00062 2
>TIGR_CMR|CBU_1321 [details] [associations]
symbol:CBU_1321 "phenylalanyl-tRNA synthetase, beta
subunit" species:227377 "Coxiella burnetii RSA 493" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073 GO:GO:0000049
SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
HOGENOM:HOG000292085 RefSeq:NP_820311.1 ProteinModelPortal:Q83C15
GeneID:1209227 KEGG:cbu:CBU_1321 PATRIC:17931377
BioCyc:CBUR227377:GJ7S-1311-MONOMER Uniprot:Q83C15
Length = 792
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 251/816 (30%), Positives = 421/816 (51%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M++ E WLR +NP + + L LTM+GLE + ++ HPD D
Sbjct: 1 MKLSEQWLREWVNPPVDTEKLTAQLTMAGLEVDSVKPAARTLEKVVVGEVIAREKHPDAD 60
Query: 61 NFNICKVDTYKNI-LDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKS 119
++C+VD ++ L+IVC PN+R GLKV ++G + + KK+ K + S
Sbjct: 61 RLSVCRVDVGEDEPLEIVCGAPNVRTGLKVAVVLVGGVVGDLKVKKT------KLRGVVS 114
Query: 120 YGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGI 179
G++CSE ++ ++ +++ + ELP DAPIGKN +Y ++ I+LTPNRGDC S+ GI
Sbjct: 115 NGMICSEREMGLSEQHEGIMELPADAPIGKNIQEYLTLDDYILDIELTPNRGDCASVRGI 174
Query: 180 AREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWMK 239
ARE+ ++ P+K N ++ PV++ A C R+ GR+IRG++ + TP W+
Sbjct: 175 AREVGAINRLPIKGPNLVTVSATINDVFPVEVKAEKACPRYIGRVIRGVDSHSQTPLWIC 234
Query: 240 IRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETXXXXXXXXX 299
RL SG + + + D+ NYVMLELG P++ FDLS++ + +R+ E
Sbjct: 235 ERLRRSGLRTIHPVVDVMNYVMLELGQPLHAFDLSRLVEGIEVRFAKADEKITLIDETEI 294
Query: 300 XXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTE 359
+ +L+GI+ G +++V T+ I+L A++ P I + HY++ T+
Sbjct: 295 ALTERMLVIADKSRPQALAGIMGGANSAVNEKTEAIFLESAYFSPGEIALTARHYDMQTD 354
Query: 360 SSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVI 419
SSYRFERG+DF +ER T L+I+I G ++P I +R ER+
Sbjct: 355 SSYRFERGVDFKLQTLAMERATELLIQITG-GSPGPLIEVCSETHLPKIPRIILRPERIK 413
Query: 420 KILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENI 479
++LGI++ E+S + L +++ N ++V P+HRFD+ +YG++ I
Sbjct: 414 RLLGIEINEDEVSKLLELLGMRVVKEKNNWVVTVPSHRFDIKEEADLIEELAHLYGYDRI 473
Query: 480 PISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFSQNINNYPIE 539
P I+P E S +R + Y E + YSF+ D L+ + + + I
Sbjct: 474 PQLRMEGEYTIAPFSETQLSSARLRCLMTDRGYHEAVTYSFVNDELQTLLNPEVTS--IA 531
Query: 540 LLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSG- 598
L NP++ + N MR++L L+ + YN R+ RIRLFEI F +G
Sbjct: 532 LSNPLTAEMNVMRTSLWPGLIQVLKYNQARQTHRIRLFEIGMC-----------FNAAGN 580
Query: 599 -YKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFFPIK----LNFLKINNSIL 653
++++ K+ + G QW E+ R +D++D+K DL LF + F + ++ L
Sbjct: 581 EWQQVTKLGGLVAGDAHSLQWAEKGRRVDFYDVKGDLSALFTLTRTEAHFRFAEGHHPAL 640
Query: 654 HPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQIPNYIQISKFP 713
HP +SA ++ K + IG++G +HP L + +L AP FE++ ++ +P Y +SKFP
Sbjct: 641 HPGQSAALYYKDQCIGYLGALHPELVDQLELTAAPFLFEMELNAIKTSILPKYHPLSKFP 700
Query: 714 NVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKY-CGKKLKDNEKSFAF 772
++ RDI + ++++ + ++ + + K+ II + FD Y GK ++ +KS A
Sbjct: 701 SIRRDIAIVVDRDVPVGNIEEEI---KSTAGQLLIITQV--FDIYESGKHIEFGKKSVAL 755
Query: 773 RCILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLR 808
QDP +TL ++ + FNAKLR
Sbjct: 756 GLTFQDPSRTLIDGEVKQIIERVLAALERKFNAKLR 791
>UNIPROTKB|P07395 [details] [associations]
symbol:pheT "phenylalanyl-tRNA synthetase beta-chain"
species:83333 "Escherichia coli K-12" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0016020
GO:GO:0000287 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008033 Gene3D:2.40.50.140
InterPro:IPR012340 eggNOG:COG0073 GO:GO:0000049 SUPFAM:SSF50249
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 Gene3D:3.30.70.380
SUPFAM:SSF54991 EMBL:V00291 EMBL:K02844 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
HOGENOM:HOG000292085 PIR:I41284 RefSeq:NP_416228.1
RefSeq:YP_489975.1 PDB:3PCO PDBsum:3PCO ProteinModelPortal:P07395
SMR:P07395 DIP:DIP-6879N IntAct:P07395 MINT:MINT-1231494
SWISS-2DPAGE:P07395 PaxDb:P07395 PRIDE:P07395
EnsemblBacteria:EBESCT00000003293 EnsemblBacteria:EBESCT00000003294
EnsemblBacteria:EBESCT00000018311 GeneID:12933094 GeneID:945382
KEGG:ecj:Y75_p1688 KEGG:eco:b1713 PATRIC:32118732 EchoBASE:EB0704
EcoGene:EG10710 BioCyc:EcoCyc:PHET-MONOMER
BioCyc:ECOL316407:JW1703-MONOMER BioCyc:MetaCyc:PHET-MONOMER
Genevestigator:P07395 Uniprot:P07395
Length = 795
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 257/815 (31%), Positives = 415/815 (50%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ E WLR +NP + S+ LAN +TM+GLE + +E HP+ D
Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60
Query: 61 NFNICKVDTYKN-ILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKS 119
+ KV+ + +LDIVC PN R GL+V A IG+ L F I K S
Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVL-----PGDFKIKAAKLRGEPS 115
Query: 120 YGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGI 179
G+LCS +L I++ + + ELP DAPIG + +Y K ++ I +TPNR DCL ++G+
Sbjct: 116 EGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGV 175
Query: 180 AREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWMK 239
AR++++L+ PL + LP+ + A + C R+ GR+++GIN KA TP WMK
Sbjct: 176 ARDVAVLNQLPLVQPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMK 235
Query: 240 IRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETXXXXXXXXX 299
+L G + + + D+TNYV+LELG P++ FD +I G + +R GET
Sbjct: 236 EKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEA 295
Query: 300 XXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTE 359
K +++ GI G + V T+++ L AF+ P SI G++ + L T+
Sbjct: 296 KLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTD 355
Query: 360 SSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVI 419
+S+R+ERG+D + K +ER T L+I+ICG +P R I +R ++
Sbjct: 356 ASHRYERGVDPALQHKAMERATRLLIDICG-GEAGPVIDITNEATLPKRATITLRRSKLD 414
Query: 420 KILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENI 479
+++G + ++++++I RL + + + + P+ RFD+ R+YG+ NI
Sbjct: 415 RLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNI 474
Query: 480 PISLPITVSKISPI-KEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFSQNINNYPI 538
P P+ S I +E SL ++ L YQEVI YSF++ +++ + +
Sbjct: 475 PDE-PVQASLIMGTHREADLSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIHPGVE--AL 531
Query: 539 ELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSG 598
L +PIS + + MR +L L+ + YN R+ R+R+FE +F+ D+ +
Sbjct: 532 LLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGL-----RFVPDTQAPLGI 586
Query: 599 YKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLF-FPIKLNFLKIN---NSILH 654
++L VI G E W +D++DLK DLE++ KLN ++ N LH
Sbjct: 587 RQDLMLAGVIC-GNRYEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEFRAEANPALH 645
Query: 655 PNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQIPNYIQISKFPN 714
P +SA I+ K + IGF+G +HP L++K DL + FE++ +L R +P +IS+FP
Sbjct: 646 PGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAREISRFPA 705
Query: 715 VVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLKDNEKSFAFRC 774
RDI + +N+ D++ K N + ++LFD Y GK + + KS A
Sbjct: 706 NRRDIAVVVAENVPAADILSEC---KKVGVNQVV--GVNLFDVYRGKGVAEGYKSLAISL 760
Query: 775 ILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLRN 809
ILQD +TL+ ++ + F A LR+
Sbjct: 761 ILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD 795
>TIGR_CMR|CPS_2995 [details] [associations]
symbol:CPS_2995 "phenylalanyl-tRNA synthetase, beta
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073 GO:GO:0000049
SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
RefSeq:YP_269694.1 ProteinModelPortal:Q47ZS5 STRING:Q47ZS5
GeneID:3520859 KEGG:cps:CPS_2995 PATRIC:21469009
HOGENOM:HOG000292085 BioCyc:CPSY167879:GI48-3044-MONOMER
Uniprot:Q47ZS5
Length = 807
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 256/828 (30%), Positives = 416/828 (50%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ E+WLR +NP LSS+DLA+ +TM+GLE + ++ HPD D
Sbjct: 1 MKFSESWLREWVNPALSSDDLAHQITMAGLEVDGVDPVAGEFSGVVIGEVVECGPHPDAD 60
Query: 61 NFNICKVDT--YKN-------ILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINI 111
+ K+ Y + ++ IVC N R+GLKV A +G+ L F I
Sbjct: 61 KLQVTKISLGDYSSTTVEKGELVTIVCGAKNCRLGLKVAVATVGAVL-----PGDFKIKK 115
Query: 112 EKKYKIKSYGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRG 171
K + S+G+LCSE ++ + + + + EL DAP+G+ +Y N++ + LT NRG
Sbjct: 116 AKLRGVPSFGMLCSESEIGLADDSDGIMELASDAPLGQCVREYLDLNDVTIDVDLTANRG 175
Query: 172 DCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPK 231
DCL L G+ARE+ +L++ + P +++ + I A + C R+ GR+I+GINP
Sbjct: 176 DCLGLKGLAREVGVLNSLEVSEPTITAVAPTIDDVITINIEANEACPRYLGRVIKGINPN 235
Query: 232 ALTPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETX 291
A TP WM +L G + + + D+TNY++LELG P++ FDL+K+ G +N+R+ N E
Sbjct: 236 ATTPLWMVEKLRRCGTRSIDPVVDVTNYILLELGHPMHAFDLAKLDGGINVRFANKDEKL 295
Query: 292 XXXXXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKS 351
K ++++GI G ++ VT NT D++L AF+ P +I GK+
Sbjct: 296 TLLDENEVTLKEGTLVIADENKALAMAGIFGGLESGVTNNTTDLFLESAFFAPLAILGKA 355
Query: 352 NHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEI 411
Y L T+SS+R+ERGID + +ER T L++ I G +IP K++
Sbjct: 356 RQYGLHTDSSHRYERGIDPTLQHDAIERATELLLSIVG-GQAGPVVEAKSDADIPQTKDV 414
Query: 412 KVRSERVIKILGIKLTNQEISNIFIRLKFHFIQKNN----IFLVIPPAHRFDLXXXXXXX 467
+R + + +G + + ++S I RL F ++ VI PA+RFD+
Sbjct: 415 NLRRKMLDSRIGHHIEDAQVSEILTRLGFTVTTTGEGEAKVWQVIVPAYRFDIKIEVDLI 474
Query: 468 XXXXRIYGFENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEK 527
RI+G+ NIP P K+ KE SL +++ L DYQE I YSF++ ++
Sbjct: 475 EEVARIFGYNNIPNIAPKATLKMCEQKEANLSLSNLKQTLVNRDYQEAITYSFVDPKVQA 534
Query: 528 DF--SQNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLH 585
Q + P +PIS + + MR +L L+ ++ YN R+ RIRLFE
Sbjct: 535 LLHPGQEVMTLP----HPISSEMSVMRLSLWTGLLQSMVYNQNRQQGRIRLFETGL---- 586
Query: 586 DKFIKDSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFFPI---- 641
+F+ D +G ++ IA + G ++ W E D++D+K D+E L
Sbjct: 587 -RFVPDES-AENGVRQQNMIAGVISGLRVDEHWSMEKAATDFYDIKGDVEALLALTCDAQ 644
Query: 642 KLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKR 701
F K LHP ++A I K +G +G +HP L++K L + FE+ E+ +
Sbjct: 645 GYEFSKAEVDALHPGQTAQITKNGVFVGCVGTLHPELERKLGLNGRTLIFELLLSEVLVQ 704
Query: 702 QIPNYIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGK 761
+IP IS+FP RD+ + ++++ ++V+ + EK + ++I ++LFD Y G+
Sbjct: 705 KIPEATDISRFPANRRDLAIVVKEDVDAKNVLQLI--EKVGGN--YLID-LNLFDVYKGQ 759
Query: 762 KLKDNEKSFAFRCILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLRN 809
+ D KS A +LQD KTL+ ++ NA LR+
Sbjct: 760 GIDDGFKSLAIALVLQDTSKTLEEKDITDVIDRVVATLKTELNASLRD 807
>UNIPROTKB|Q9KSN6 [details] [associations]
symbol:pheT "Phenylalanine--tRNA ligase beta subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=ISS]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00283 InterPro:IPR002547 InterPro:IPR004532
InterPro:IPR005121 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF01588 Pfam:PF03147 Pfam:PF03483
Pfam:PF03484 PROSITE:PS50886 PROSITE:PS51447 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 SMART:SM00896 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008033 Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073
GO:GO:0000049 SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890
Gene3D:3.30.56.20 OMA:MKFSEQW ProtClustDB:PRK00629
Gene3D:3.50.40.10 InterPro:IPR020825 SUPFAM:SSF56037
TIGRFAMs:TIGR00472 PIR:D82225 RefSeq:NP_230865.1
ProteinModelPortal:Q9KSN6 DNASU:2614657 GeneID:2614657
KEGG:vch:VC1220 PATRIC:20081536 Uniprot:Q9KSN6
Length = 795
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 251/814 (30%), Positives = 401/814 (49%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ E+WLR +NP +++++L + +TM+GLE + + HPD D
Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDVLAVAGVFDGVKVGHVVECAQHPDAD 60
Query: 61 NFNICKVDT-YKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKS 119
+ KVD + +LDIVC N R GLKV A +G++L F I K S
Sbjct: 61 KLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATL-----PGDFKIKKAKLRGQPS 115
Query: 120 YGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGI 179
+G+LCS +L I+ ++ + EL E+APIG +F D+ N++ + LT NR DC S+ G+
Sbjct: 116 HGMLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGL 175
Query: 180 AREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWMK 239
ARE+ +L+ + + + + + + A C R+ GRI++ +N +A TP WM+
Sbjct: 176 AREVGVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPLWMQ 235
Query: 240 IRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETXXXXXXXXX 299
+L G + + + DITN+VMLE G P++ FDL+KI G + +R E
Sbjct: 236 EKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDGSEA 295
Query: 300 XXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTE 359
K ++++G+ G + V+ +TKD+ L AF+ P+ IRG++ Y L T+
Sbjct: 296 KLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGLHTD 355
Query: 360 SSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVI 419
SS RFERG+D++ +ER T L++EICG ++P ++ +R ++
Sbjct: 356 SSMRFERGVDYALQHAAMERATQLLVEICG-GDVAPVVAAESAADLPKPNQVALRRSKLD 414
Query: 420 KILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENI 479
K+LG + + ++ I RL + P RFD+ RIYG+ NI
Sbjct: 415 KLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYNNI 474
Query: 480 PISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFSQNINNYPIE 539
P P+ ++ E L +R L YQE I YSF+E +K ++ +
Sbjct: 475 PNQAPVAALNMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPGVD--ALI 532
Query: 540 LLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGY 599
L NPIS + + MR +LI L+N + +N KR+ R+RLFE +FI D+ +G
Sbjct: 533 LPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGL-----RFIPDAA-AENGM 586
Query: 600 KELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLF-FPIK---LNFLKINNSILHP 655
++ +A + G E W E +D+FD+K DLE + K +F + LHP
Sbjct: 587 RQEPMLAGVISGARGEEHWNMETATVDFFDMKGDLEAVLELTAKGKAYSFAATKHPALHP 646
Query: 656 NRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQIPNYIQISKFPNV 715
++A I K IG IG +HP L++K+ L I FE++ + R IP ISKFP
Sbjct: 647 GQAAAIMVDGKAIGVIGTVHPELERKFGLNGRTIVFEIEWNAINTRVIPEAAAISKFPAN 706
Query: 716 VRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLKDNEKSFAFRCI 775
RDI + + NI D+++ +++ LFD Y GK +++ +KS A
Sbjct: 707 RRDIALVVDGNIASGDIVEACRVAGGE-----LLKDAKLFDVYVGKGVEEGKKSLAIALT 761
Query: 776 LQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLRN 809
LQ ++TL+ +V F A LR+
Sbjct: 762 LQSVERTLEEADIAAAVEAIVQAVSAQFGAALRD 795
>TIGR_CMR|VC_1220 [details] [associations]
symbol:VC_1220 "phenylalanyl-tRNA synthetase, beta chain"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073 GO:GO:0000049
SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472 PIR:D82225
RefSeq:NP_230865.1 ProteinModelPortal:Q9KSN6 DNASU:2614657
GeneID:2614657 KEGG:vch:VC1220 PATRIC:20081536 Uniprot:Q9KSN6
Length = 795
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 251/814 (30%), Positives = 401/814 (49%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ E+WLR +NP +++++L + +TM+GLE + + HPD D
Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDVLAVAGVFDGVKVGHVVECAQHPDAD 60
Query: 61 NFNICKVDT-YKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKS 119
+ KVD + +LDIVC N R GLKV A +G++L F I K S
Sbjct: 61 KLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATL-----PGDFKIKKAKLRGQPS 115
Query: 120 YGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGI 179
+G+LCS +L I+ ++ + EL E+APIG +F D+ N++ + LT NR DC S+ G+
Sbjct: 116 HGMLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGL 175
Query: 180 AREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWMK 239
ARE+ +L+ + + + + + + A C R+ GRI++ +N +A TP WM+
Sbjct: 176 AREVGVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPLWMQ 235
Query: 240 IRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETXXXXXXXXX 299
+L G + + + DITN+VMLE G P++ FDL+KI G + +R E
Sbjct: 236 EKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDGSEA 295
Query: 300 XXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTE 359
K ++++G+ G + V+ +TKD+ L AF+ P+ IRG++ Y L T+
Sbjct: 296 KLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGLHTD 355
Query: 360 SSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVI 419
SS RFERG+D++ +ER T L++EICG ++P ++ +R ++
Sbjct: 356 SSMRFERGVDYALQHAAMERATQLLVEICG-GDVAPVVAAESAADLPKPNQVALRRSKLD 414
Query: 420 KILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENI 479
K+LG + + ++ I RL + P RFD+ RIYG+ NI
Sbjct: 415 KLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYNNI 474
Query: 480 PISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFSQNINNYPIE 539
P P+ ++ E L +R L YQE I YSF+E +K ++ +
Sbjct: 475 PNQAPVAALNMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPGVD--ALI 532
Query: 540 LLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGY 599
L NPIS + + MR +LI L+N + +N KR+ R+RLFE +FI D+ +G
Sbjct: 533 LPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGL-----RFIPDAA-AENGM 586
Query: 600 KELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLF-FPIK---LNFLKINNSILHP 655
++ +A + G E W E +D+FD+K DLE + K +F + LHP
Sbjct: 587 RQEPMLAGVISGARGEEHWNMETATVDFFDMKGDLEAVLELTAKGKAYSFAATKHPALHP 646
Query: 656 NRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQIPNYIQISKFPNV 715
++A I K IG IG +HP L++K+ L I FE++ + R IP ISKFP
Sbjct: 647 GQAAAIMVDGKAIGVIGTVHPELERKFGLNGRTIVFEIEWNAINTRVIPEAAAISKFPAN 706
Query: 716 VRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLKDNEKSFAFRCI 775
RDI + + NI D+++ +++ LFD Y GK +++ +KS A
Sbjct: 707 RRDIALVVDGNIASGDIVEACRVAGGE-----LLKDAKLFDVYVGKGVEEGKKSLAIALT 761
Query: 776 LQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLRN 809
LQ ++TL+ +V F A LR+
Sbjct: 762 LQSVERTLEEADIAAAVEAIVQAVSAQFGAALRD 795
>TIGR_CMR|SO_2086 [details] [associations]
symbol:SO_2086 "phenylalanyl-tRNA synthetase, beta subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
HOGENOM:HOG000292085 RefSeq:NP_717689.1 ProteinModelPortal:Q8EF99
GeneID:1169830 KEGG:son:SO_2086 PATRIC:23523790 Uniprot:Q8EF99
Length = 795
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 251/814 (30%), Positives = 409/814 (50%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ E+WLR +NP +S L++ +TM+GLE + ++ HPD D
Sbjct: 1 MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFNGVVIGEVVECGLHPDAD 60
Query: 61 NFNICKVDTYKN-ILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKS 119
+ KV + ++DIVC PN R GLKV A++G+ L F I K + S
Sbjct: 61 KLRVTKVSVGSSELIDIVCGAPNCRQGLKVAVAMVGAVL-----PGDFKIKKAKLRGMPS 115
Query: 120 YGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGI 179
G+LCS +L I+ + + ELP DAP+G + +Y K ++ + LT NR DCL ++G+
Sbjct: 116 EGMLCSYSELGIDIDSDGIIELPLDAPLGTDLREYLKLDDAVIEVDLTANRADCLGMVGL 175
Query: 180 AREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWMK 239
ARE+ +L+ + + P + + + C R+ GR+++ +N KA TP WM+
Sbjct: 176 AREVGVLNRQAVTEPQWQAVTPTTDAKVTINVKESAACPRYLGRVVKNVNVKAATPLWMQ 235
Query: 240 IRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETXXXXXXXXX 299
+L SG + + + DITN+V++E G P++ FDL+K++G++ +R GN E
Sbjct: 236 EKLRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSEV 295
Query: 300 XXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTE 359
+ ++L+G+ G + V+ T+DI L AF+ P +I GKS L T+
Sbjct: 296 TIPSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTD 355
Query: 360 SSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVI 419
SS+RFERG+D K ++R T L+++ICG ++P +I +R ++
Sbjct: 356 SSHRFERGVDPEMQHKVIDRATRLVLDICG-GEAGPVVEAKSDADLPKPAQILLRRSKLD 414
Query: 420 KILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENI 479
KILG + + ++ I RL F ++ + VI +RFD+ RIYG+ NI
Sbjct: 415 KILGHYVPDSDVVEILERLGFSVVKGEGCWQVITATYRFDMAIEEDLIEEVARIYGYNNI 474
Query: 480 PISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFSQNINNYPIE 539
P PI ++S KE SL +R L +QE + YSF++ L+ + +
Sbjct: 475 PNVAPIASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQN--LVHPGEQAMV 532
Query: 540 LLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGY 599
L NPIS + + MR ++ L+ + YN R+ R+RLFE +F+ D SG
Sbjct: 533 LPNPISSEMSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGL-----RFVPDIN-AESGV 586
Query: 600 KELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLF-FPI---KLNFLKINNSILHP 655
++ + + GP + W E++ +D+FDLK DLE + + + +F +S LHP
Sbjct: 587 RQQAMLGCVITGPQNDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSALHP 646
Query: 656 NRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQIPNYIQISKFPNV 715
+ A I + + IG IG IHP L++ + L I FE++ L +P +SKFP
Sbjct: 647 GQCAEILRNDRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPAN 706
Query: 716 VRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLKDNEKSFAFRCI 775
RDI + +++++ DVM + + N + I+LFD Y GK ++ +KS A
Sbjct: 707 RRDIAVVVDESVSAGDVMKLI---RKVGENQLV--GINLFDVYLGKGVEPGKKSLAIALT 761
Query: 776 LQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLRN 809
LQD +TL+ ++ FNA LR+
Sbjct: 762 LQDTTRTLEEKEIAETVESVVSALKTEFNASLRD 795
>TIGR_CMR|CHY_1570 [details] [associations]
symbol:CHY_1570 "phenylalanyl-tRNA synthetase, beta
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=ISS]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=ISS]
[GO:0009328 "phenylalanine-tRNA ligase complex" evidence=ISS]
HAMAP:MF_00283 InterPro:IPR002547 InterPro:IPR004532
InterPro:IPR005121 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF01588 Pfam:PF03147 Pfam:PF03483
Pfam:PF03484 PROSITE:PS50886 PROSITE:PS51447 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 SMART:SM00896 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008033 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
SUPFAM:SSF50249 eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890
Gene3D:3.30.56.20 HOGENOM:HOG000292087 OMA:MKFSEQW
Gene3D:3.50.40.10 InterPro:IPR020825 SUPFAM:SSF56037
TIGRFAMs:TIGR00472 RefSeq:YP_360399.1 ProteinModelPortal:Q3ABT5
STRING:Q3ABT5 GeneID:3728250 KEGG:chy:CHY_1570 PATRIC:21276265
BioCyc:CHYD246194:GJCN-1569-MONOMER Uniprot:Q3ABT5
Length = 798
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 235/823 (28%), Positives = 387/823 (47%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M I NWL+ ++ +L LT G+ EK+ T P +
Sbjct: 1 MNISYNWLQEFCEIPYTAQELGEKLTSVGIAVEKV-TYIGNYEKVVVGEVLEVENLPGTE 59
Query: 61 NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY 120
F KV T K I ++V N+ G K P A+ G+ L I + + S
Sbjct: 60 LFKT-KVSTGKEIFEVVTGAKNVFAGFKYPFALPGAKL-----PNGITIEERRIRGVVSQ 113
Query: 121 GLLCSEYDLKINNKNKY---LFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLL 177
G+L S +L + + L LP +AP+G+ + ++ + LTPNRGDCLS+L
Sbjct: 114 GMLLSAEELGLLERKGAEPGLMLLPPEAPVGEKIEKVLELDDYLLELDLTPNRGDCLSVL 173
Query: 178 GIAREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKW 237
G+ARE++ L+ LKL ++ L N + ++I +LCGR+ G +I+ + +P W
Sbjct: 174 GVAREVAALTGHRLKLAEPELPLDNGSCPVSIEIQNPELCGRYMGIVIKNVKVGP-SPLW 232
Query: 238 MKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKI-SGELNIRWGNIGETXXXXXX 296
++ RL +G + ++ + D+TNY++LE G P++ FDL K+ S E+ +R GE
Sbjct: 233 LEQRLRKAGIRPINNIVDVTNYILLEYGQPLHAFDLDKLASPEIIVRNARAGEKITTLDG 292
Query: 297 XXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNL 356
K I+++GI+ G + V +TK +++ A++ P S+R + L
Sbjct: 293 VERELTSEMLVIADREKPIAVAGIMGGQNTEVDDDTKTVFIEAAWFNPVSVRKTARKLGL 352
Query: 357 VTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSE 416
T++S RFE+ +D + L + +I E+ G P K I V
Sbjct: 353 RTDASQRFEKNVDIEGIKRALIKAALMICELAGGTIQGRYGDVYPKKFTP--KVIAVSLS 410
Query: 417 RVIKILGIKLTNQEISNIFIRLKFHF-IQKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYG 475
R + LGI L + + I L F I + IF+ +P ++R D+ R G
Sbjct: 411 RAEEFLGISLDAKRVVEILESLGFRVTIGEKKIFVEVP-SYRPDVSLEADIYEEIARYLG 469
Query: 476 FENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIE-DSLEK-DFS-QN 532
+ N P ++PI ++ E Y + +++ L QE+I YSFI DS K S
Sbjct: 470 YNNFPDTMPIGITTTGFSPE-YNFEYKVKNLLTALGMQEIITYSFINPDSYNKLGLSVDE 528
Query: 533 INNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDS 592
+ + LLNP+S + + MR+TL+ L++ N R+ E + LFE+ NV+ +K +D
Sbjct: 529 VLTKSVVLLNPLSIEQSVMRTTLLPGLLDIAKRNENRQQENLLLFEMGNVF--EKNGEDL 586
Query: 593 PFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFFPIKLNFLKINNS- 651
P KE K I IA G W + R D++ +K LE+LF + +N + +
Sbjct: 587 P------KETKLIGGIALG-YRYGDWYNKPRKYDFYYVKGILESLFTSLGINNFSFSAAK 639
Query: 652 ---ILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQIP---N 705
LHP ++A ++ + IG++GE+HP++Q+KY+ P+ FE++ +L K IP
Sbjct: 640 DLPFLHPGKAARVYLENTEIGYLGELHPLVQKKYEFKNTPLVFELN-YDLLKTLIPAEKK 698
Query: 706 YIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLKD 765
Y +S +P V RDI + + I ++ + K N +++I +FD Y G+KL
Sbjct: 699 YTPLSPYPEVKRDIALLVEREIPAATFIEVI---KGLAINT--LKNIEIFDVYEGEKLGP 753
Query: 766 NEKSFAFRCILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLR 808
N+KS A +KTL ++ AKLR
Sbjct: 754 NKKSIAISLTFSSTEKTLSEEEINNFMAQVLKALEAKTGAKLR 796
>TIGR_CMR|BA_4803 [details] [associations]
symbol:BA_4803 "phenylalanyl-tRNA synthetase, beta subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073 GO:GO:0000049
SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
RefSeq:NP_847006.1 RefSeq:YP_021448.1 RefSeq:YP_030702.1
ProteinModelPortal:Q81L31 IntAct:Q81L31 DNASU:1083936
EnsemblBacteria:EBBACT00000010587 EnsemblBacteria:EBBACT00000014500
EnsemblBacteria:EBBACT00000020061 GeneID:1083936 GeneID:2815788
GeneID:2851596 KEGG:ban:BA_4803 KEGG:bar:GBAA_4803 KEGG:bat:BAS4455
HOGENOM:HOG000292087 OMA:MKFSEQW ProtClustDB:PRK00629
BioCyc:BANT260799:GJAJ-4512-MONOMER
BioCyc:BANT261594:GJ7F-4665-MONOMER Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
Uniprot:Q81L31
Length = 806
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 214/827 (25%), Positives = 397/827 (48%)
Query: 1 MQIPENWLRTIINPK-LSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDI 59
M + WL+ ++ K +++ +LA+ +T SG+E E +E HP+
Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60
Query: 60 DNFNICKVDT-YKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIK 118
D + C +D + + I+C NI GLKVP A +G+ L +F I K
Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVL-----PGNFKIKKAKLRGEA 115
Query: 119 SYGLLCSEYDLKINNK---NKY---LFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGD 172
S+G++C+ +L I+ K +Y +F P DA +G + + ++ + LTPNR D
Sbjct: 116 SHGMVCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRAD 175
Query: 173 CLSLLGIAREISILSNTPLKL--LNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINP 230
CL++LG+A E++ + +KL ++ + T + + V + A + + ++++ +
Sbjct: 176 CLNMLGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKI 235
Query: 231 KALTPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKI-SGELNIRWGNIGE 289
+P WM+ RL +G + +S + DITNY+++E G P++ FD K+ S E+ +R GE
Sbjct: 236 GP-SPMWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGE 294
Query: 290 TXXXXXXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRG 349
K ++++G++ G D+ VT T ++ + A++ ++R
Sbjct: 295 KIETLDDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRR 354
Query: 350 KSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRK 409
S L +ESS RFE+GID ++T + ++ L+ + G N+ V++
Sbjct: 355 TSKDLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAG---GEALEGVVEADNLQVQE 411
Query: 410 E-IKVRSERVIKILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLXXXXXXXX 468
+ V +E+V ++LG ++ E+ +F LKF F + F V PA R D+
Sbjct: 412 RTVSVTAEKVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVE 471
Query: 469 XXXRIYGFENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKD 528
R+YG+++IP++LP + +R L A E I YS K
Sbjct: 472 EVGRLYGYDHIPVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQ 531
Query: 529 FSQNINNY-PIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDK 587
+ N P+ L P+S++ + +R +L+ L+ + YN+ RK + + L+E+ +++L +
Sbjct: 532 YMVEPNEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTE 591
Query: 588 FIKDSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFFPI----KL 643
+ P KE + +A + G L W E + +D+F +K LE LF + ++
Sbjct: 592 -AGELP------KEEQHLAGVMTGLALHHAWQGEKKVVDFFVVKGVLEGLFDVLGVSNQI 644
Query: 644 NFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALEL--QKR 701
+ +HP R+A I + IGFIG++HP +++ D+ +F E+ +++
Sbjct: 645 TYAPAKREGMHPGRTADIVLDGEVIGFIGQLHPEAEKQLDVKNTFVF-ELSLVKVFGTDA 703
Query: 702 QIPNYIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGK 761
+ Y I +FP++ RD+ + K + M + E +++ ++LFD Y G+
Sbjct: 704 EETYYSAIPRFPSMTRDMAVVVTKETKAGE-MKQVIAEAGGE----LLKDVTLFDLYEGE 758
Query: 762 KLKDNEKSFAFRCILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLR 808
K+++ +KS AF DP++TL +V + F A+LR
Sbjct: 759 KMEEGKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805
>TIGR_CMR|GSU_1520 [details] [associations]
symbol:GSU_1520 "phenylalanyl-tRNA synthetase, beta
subunit" species:243231 "Geobacter sulfurreducens PCA" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
HOGENOM:HOG000292087 OMA:MKFSEQW ProtClustDB:PRK00629
Gene3D:3.50.40.10 InterPro:IPR020825 SUPFAM:SSF56037
TIGRFAMs:TIGR00472 RefSeq:NP_952571.1 ProteinModelPortal:Q74CZ9
GeneID:2687692 KEGG:gsu:GSU1520 PATRIC:22025881
BioCyc:GSUL243231:GH27-1503-MONOMER Uniprot:Q74CZ9
Length = 801
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 221/809 (27%), Positives = 371/809 (45%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M + NWL+ + LS+ +L +LLTM GLE E + HP+ D
Sbjct: 1 MIVTYNWLKEFVECDLSTQELGDLLTMLGLEVEGVREVGGGLDQVVVAVVEERRKHPNAD 60
Query: 61 NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY 120
++CKV+ + ILDIVC N G KV A IG+ L F I K +S
Sbjct: 61 KLSLCKVNNGREILDIVCGAQNFTAGDKVALAQIGAVL-----PGDFKIKRSKIRGEESC 115
Query: 121 GLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGIA 180
G+LCSE +L ++ +++ + LP D P+G +D + F I LTPNR DCLS++G+A
Sbjct: 116 GMLCSERELGLSAESEGIMILPSDLPLGVPLFDALGLKDTIFEIGLTPNRADCLSVIGVA 175
Query: 181 REISILSNTPLKLLNTKITLPNYKEIL---PV--KISAI----DLCGRFSGRIIRG--IN 229
REI+ L +IT P + + PV K + I +LC R++ R I G I
Sbjct: 176 REIAAK-------LGKRITYPGHAVVESGEPVTQKATVIVEDPELCPRYTARFISGCSIG 228
Query: 230 PKALTPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGE-LNIRWGNIG 288
P +P W+ RLE G + ++ + D+TNYV++E G P++ FD + + +R G
Sbjct: 229 P---SPAWLVRRLEAVGMRSINNVVDVTNYVLMEYGHPLHAFDADLLENSTIVVRRATDG 285
Query: 289 ETXXXXXXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIR 348
E + ++L+GI+ G ++ + T +I L A++ P++IR
Sbjct: 286 EVFTTLDGQQRTLTAGDLTIRDGARSVALAGIMGGENSEIRDTTTNILLESAYFNPSAIR 345
Query: 349 GKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPV- 407
+ L TESS+RFERG D + + L+R L+ E+ G PV
Sbjct: 346 RTAKRLGLHTESSHRFERGADVAIVTRALDRAAALLAELAGGTVAAGIIDVYPT---PVS 402
Query: 408 RKEIKVRSERVIKILGIKLTNQEISNIFIRLKFHFIQ-KNNIFLVIPPAHRFDLXXXXXX 466
+ I+ R +R +LG++L+ E+ +F L+F + + I V P R DL
Sbjct: 403 HRTIRFRVDRCNALLGVELSANEMKALFHHLEFTTVTVEPGIIDVTVPTFRVDLEREIDL 462
Query: 467 XXXXXRIYGFENIPISLP-ITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIED-S 524
R+ G++ I ++P V P K R + + EVI +SF+ +
Sbjct: 463 VEEVARLNGYDRIETTMPRARVFSDRPTKHQRMER-RCRDLMVGQGFNEVITFSFMAPGA 521
Query: 525 LEKDF--SQNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANV 582
L++ ++ + L NP+ + MR+TL+ L+ NL + +RLFE+ V
Sbjct: 522 LDRMMLGPEDGRRSVVALRNPLVDEQAVMRTTLLPGLLEAASRNLNYRSLDLRLFELRRV 581
Query: 583 YLH--DKFIKDSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLF-- 638
YL + + + P ++G + G W +E +D++D+K +E +
Sbjct: 582 YLRVEGEQLPNEPLVLAG---------LMTGRRYPEGWNQEKHPLDFYDVKGVVEAVLDA 632
Query: 639 FPIK-LNFLKINNSIL-HPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDAL 696
F + ++ + + HP +S + +G +GE+HP +Q + + +FE++
Sbjct: 633 FSVSGASYSSDDTDVFYHPGKSCTVKCGDLILGSLGELHPDVQDNFGIDQPVFYFELNFE 692
Query: 697 ELQK--RQIPNYIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISL 754
L R + S+FP+ RDI + D++ + + I+S ++
Sbjct: 693 RLLSAARAASAVVPPSRFPDTFRDIAILVADETPAADIVRCI-----DGLRIREIESAAV 747
Query: 755 FDKYCGKKLKDNEKSFAFRCILQDPKKTL 783
FD Y G + + +KS A R + +KTL
Sbjct: 748 FDLYKGVHVPEGKKSIAVRVRYRSTEKTL 776
>TIGR_CMR|DET_0366 [details] [associations]
symbol:DET_0366 "phenylalanyl-tRNA synthetase, beta
subunit" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=ISS]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=ISS]
[GO:0009328 "phenylalanine-tRNA ligase complex" evidence=ISS]
HAMAP:MF_00283 InterPro:IPR002547 InterPro:IPR004532
InterPro:IPR005121 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF01588 Pfam:PF03147 Pfam:PF03483
Pfam:PF03484 PROSITE:PS50886 PROSITE:PS51447 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 SMART:SM00896 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0008033 Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073
GO:GO:0000049 SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890
Gene3D:3.30.56.20 HOGENOM:HOG000292087 OMA:MKFSEQW
ProtClustDB:PRK00629 Gene3D:3.50.40.10 InterPro:IPR020825
SUPFAM:SSF56037 TIGRFAMs:TIGR00472 RefSeq:YP_181112.1
ProteinModelPortal:Q3Z9I7 STRING:Q3Z9I7 PRIDE:Q3Z9I7 GeneID:3230328
KEGG:det:DET0366 PATRIC:21607801 BioCyc:DETH243164:GJNF-366-MONOMER
Uniprot:Q3Z9I7
Length = 809
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 219/813 (26%), Positives = 385/813 (47%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+IP WL+ + +S +LA +TM+G E + + HP+ D
Sbjct: 1 MKIPLKWLKEYLPTDMSPAELAERMTMAGTEVTVLNSRKDKWPNVYVGQIMEVNRHPNAD 60
Query: 61 NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY 120
+ KVD + +V PN + G KV A G+ L+ + K ++ ++S
Sbjct: 61 RLVLVKVDWGQGQETVVTGAPNCKAGDKVVFARTGAVLIDGHNGKEMVLKPAVLRGVESC 120
Query: 121 GLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGIA 180
G++CSE +L ++++++ + LP DAP+G +Y + ++LTPNRGD + + G+A
Sbjct: 121 GMVCSERELGLSDEHEGILILPADAPVGMLASEY--LGEIILDLELTPNRGDLMCVTGVA 178
Query: 181 REI-SILSNTP-LKLLNTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWM 238
RE+ +++ P + + K T + K+ + ++I LC R++ +I GI +P W+
Sbjct: 179 RELGALIDRLPSISTPDFKATGKDIKDKINIEIKNTKLCTRYTASLIEGIKIGE-SPDWL 237
Query: 239 KIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKI-SGELNIRWGNIGETXXXXXXX 297
K RL G + ++ + D TNYVMLE G P++ FD +I S + +R GE
Sbjct: 238 KERLIACGMRPINNVVDATNYVMLEFGQPLHSFDYDQIKSKHIIVRPAAEGEVLTTLDGV 297
Query: 298 XXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLV 357
KII+L+G++ G + VT T + L A + +SIR + L
Sbjct: 298 ERKLSPDMLLITEPDKIIALAGVMGGENTEVTEKTASVLLESATFDKHSIRRTAKALKLQ 357
Query: 358 TESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKE---IKVR 414
+E+S RFE+G+ F L+R T LI+EI G +PV+K+ + +
Sbjct: 358 SEASARFEKGLSFELAPVALKRATQLILEIAGGQAASGLMDV-----MPVKKDRNSVVLS 412
Query: 415 SERVIKILGIKLTNQEISNIFIRLKFHFIQK-------------NNIFLVIPPAHRFDLX 461
+V ++LG++ + I RL F ++ + ++ P R D+
Sbjct: 413 LSKVNRVLGLEGEKFDSCKIAKRLGFAWMPEYVPGMEEFGYGSVDDKMRFFPGYWRMDIE 472
Query: 462 XXXXXXXXXXRIYGFENIPISLPI--TVSKI-SPIKEGYQSLFSIRHQLAFADYQEVINY 518
RI G++ IP LP+ + KI +P G + +R L+ +QE+I+Y
Sbjct: 473 SDIDMIEEVARIAGYDTIPC-LPLDKAIPKIETPPLPGIKRF--LRQILSGYGFQELISY 529
Query: 519 SFIE-DSLEKDFSQNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLF 577
SF + L + FS + + NP+S + MR++L +L ++ N + + +RL+
Sbjct: 530 SFTSREMLSRVFS-GAEPECLAISNPMSSEQEVMRTSLRPALYASLAANRRFEKNGLRLY 588
Query: 578 EIANVYLHDKFIK-DSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLEN 636
E+ +YL + K D P E+ A+IA G E W D+FD K +E+
Sbjct: 589 ELGRIYLPKENNKQDEP-------EML-CALIA-GSASEAWWQRNTAGFDFFDAKGIVES 639
Query: 637 LF--FPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIF-FEV 693
L I +F + L P A I +G +G++ P K+ + P++ FE+
Sbjct: 640 LVSRLGIAADFAVSDEPGLTPGYQAGILVGDMPVGVLGQLSPQTADKFGIT-EPVYMFEI 698
Query: 694 DALELQKRQIPN--YIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQS 751
+ +L R + QI++FP+V RD+ + +++I + V D + S ++++
Sbjct: 699 NLSKLITRATVRRKFTQINRFPSVERDLALVLDRSITNRQVTDII-------SEFDLVKN 751
Query: 752 ISLFDKYCGKKLKDNEKSFAFRCILQDPKKTLK 784
+ LFD Y GK++ +++KS A+ + Q TLK
Sbjct: 752 VELFDMYQGKQVAEDKKSLAYHLLFQSDTHTLK 784
>TIGR_CMR|ECH_0434 [details] [associations]
symbol:ECH_0434 "phenylalanyl-tRNA synthetase, beta
subunit" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
HOGENOM:HOG000292085 RefSeq:YP_507252.1 ProteinModelPortal:Q2GH31
STRING:Q2GH31 GeneID:3928010 KEGG:ech:ECH_0434 PATRIC:20576345
BioCyc:ECHA205920:GJNR-435-MONOMER Uniprot:Q2GH31
Length = 788
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 217/825 (26%), Positives = 367/825 (44%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ +WL ++ +S + + N L+ G+E + ++ H +
Sbjct: 1 MRFTLSWLMQYLDTDVSLDIIVNKLSDIGIEVDNVDYCEHLKTFVVAEVLEVVPHHA-AN 59
Query: 61 NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY 120
+C+V K +VC N+R G+K A +GS I K +S +I + K ++SY
Sbjct: 60 RLKVCQVFDGKETFQVVCGASNVRAGIKSVLARVGS---IIPKNQS-VIEVVKLRGVESY 115
Query: 121 GLLCSEYDLKI---NNKNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLL 177
G+LCS+ +L I +N N + EL +G F+ + +TPNRGDCL +
Sbjct: 116 GMLCSKDELGIVDHSNSNDGIIELSSAYNVGNTFFSCDPI----IEVSITPNRGDCLGVY 171
Query: 178 GIAREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLC----GRFSGRIIRGINPKAL 233
GIAR+++ LK ++ I + S +D+C G GR I+GI
Sbjct: 172 GIARDLAAAGMGKLKCIDNNIV----NDSTASNSSPVDICMQAEGIVKGRYIKGIK-NCE 226
Query: 234 TPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIG-ETXX 292
+PKW+K L G VS + DITNY+ML P++++D SKI +L + + E
Sbjct: 227 SPKWLKDNLLVCGINSVSFVVDITNYIMLSFNRPLHVYDASKIKKKLIFKKADSQMEFSA 286
Query: 293 XXXXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSN 352
I S++GII +S +L T+DI+L A++ P I S
Sbjct: 287 LNDKKYILGTENIIAVDSNDNIHSVAGIIGSQLSSCSLETEDIFLESAWFNPMDIVLSSR 346
Query: 353 HYNLVTESSYRFERGIDFSKTIKC-LERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEI 411
L T++SYRFER +D K ++ L+ T +I+E CG N +R +
Sbjct: 347 KIKLSTDASYRFERFVD-PKFLQTGLDLATKMILEYCGGEFFDVVSDENYLIN-DIRLDF 404
Query: 412 KVRSERVIKILGIKLTNQEISNIFIRLKFHFIQKNN--IFLVIPPAHRFDLXXXXXXXXX 469
S R K+ + + ++I + ++L F F+ +N ++ V P+ R D+
Sbjct: 405 LPESVR--KVGNVDIATKQIFDFLVKLGF-FVDNSNEDVWKVTVPSWRSDIQHSSDIVEE 461
Query: 470 XXRIYGFENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDF 529
R+YG++ I PI +S + + Y L S+ L EVI +SF + K
Sbjct: 462 VLRLYGYDKI-CEEPIPISHVDVVDNSYDRLRSV---LLSEGLMEVITWSFTSMTFAKKL 517
Query: 530 SQNINNYPIELL---NPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHD 586
Y ELL NPI+ K N MR +++ +L+ + N + +FEI +Y D
Sbjct: 518 G-----YDSELLLLDNPINDKLNLMRPSVLLNLLQVVSDNQAYGSSEVAIFEIGQIYNID 572
Query: 587 KFIKDSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFFPIKLNFL 646
+ + V G + Y L+ + D + +L N+ + F
Sbjct: 573 NVCSGNSYVVGGVRYGNNFPRNLYK--LDRSVDIFDVKSDVISILREL-NINSDA-VEFK 628
Query: 647 KINNSILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDALELQKRQI--P 704
K + LHP +SA ++ +G+ GE+HP + Y++ + FEV ++ + +
Sbjct: 629 KSDKPYLHPVKSADVYFNNILLGYFGELHPDIIHLYEIKRPVVCFEVFLYKIPQINVISK 688
Query: 705 NYIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLK 764
+++ S + V RD F+ +KNI++Q ++D KN+NS +I ++ +FD Y G +
Sbjct: 689 EFVE-SCYQLVKRDFAFLIDKNISVQCLVDVT---KNSNST--LIDNVVVFDLYEGDNIG 742
Query: 765 DNEKSFAFRCILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLRN 809
DN+ S A + TL +V + LR+
Sbjct: 743 DNKLSVALSVTFRPVDHTLNDQEIKDASDRIISAVAQELGGVLRS 787
>TIGR_CMR|SPO_3489 [details] [associations]
symbol:SPO_3489 "phenylalanyl-tRNA synthetase, beta
subunit" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073 GO:GO:0000049
SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
HOGENOM:HOG000292085 RefSeq:YP_168685.1 ProteinModelPortal:Q5LMS3
DNASU:3194649 GeneID:3194649 KEGG:sil:SPO3489 PATRIC:23380443
Uniprot:Q5LMS3
Length = 798
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 212/830 (25%), Positives = 358/830 (43%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ +WL+ ++ S +++A LT GLE E IE HPD D
Sbjct: 1 MKFTLSWLKDHLDTTASVDEIAEALTDLGLEVEGIENPAARLAGFTLAHVKSASQHPDAD 60
Query: 61 NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY 120
+C V+T + IVC PN R G+ V A G + I+ S + NI ++S+
Sbjct: 61 RLRVCVVETNEGEKQIVCGAPNAREGITVVLAKPGDYVPGIDVTLS-VGNIRG---VESH 116
Query: 121 GLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNNLKFV-----IKLTPNRGDCLS 175
G++CSE +L++++++ + ELP +G+ F D+ N+ V I +TPNR D L
Sbjct: 117 GMMCSERELELSDEHDGIIELPS-GEVGERFIDWLAENDPAKVDPVIEIAITPNRPDALG 175
Query: 176 LLGIAREISILSNTPLKLLNTKITLPNYKEI-LPVKIS----AIDLCGRFSGRIIRGINP 230
+ GIAR+++ LK T+ P + P+K++ D C F+GR+IR +
Sbjct: 176 VAGIARDLAARGIGTLK---TRAYAPVPGDFDCPIKVTIDEDTRDGCPLFTGRLIRDVR- 231
Query: 231 KALTPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGET 290
+P+W++ +L G + +S L DITNY+ + P+++FD K+ G L + GET
Sbjct: 232 NGPSPQWLQDQLRAIGLRPISALVDITNYMTYDHNRPLHVFDADKVKGNLRVHRAAGGET 291
Query: 291 XXXXXXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGK 350
S++GI+ G T T +++L A+W I
Sbjct: 292 LKALDEKEYTFQPGMMVISDDEGAESIAGIMGGDATGCTEETVNVFLESAYWDNVQIALA 351
Query: 351 SNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKE 410
+ +++ YRFERG+D + T++ LE T +I++ICG + +
Sbjct: 352 GRALKINSDARYRFERGVDPAYTLEGLEHATQMILDICGGEASTVVIAGAVPDH---SRA 408
Query: 411 IKVRSERVIKILGIKLTNQEISNIFIRLKFHFIQKNNIFLVIPPAHRFDLXXXXXXXXXX 470
K+ +ERV ++G+ + E RL F + N+ V P+ R D+
Sbjct: 409 YKLDAERVRSLVGMDIPESEQRQTLTRLGFRL--EGNMAHV--PSWRPDVQGEADLVEEV 464
Query: 471 XRIYGFEN-IPISLP-ITVSKISPIKEGYQSLFSI-RHQLAFADYQEVINYSFIEDSLEK 527
RI + LP +T P+ Q S+ R A Y E ++Y+FI+ +
Sbjct: 465 ARIASLTKLVGRPLPRLTDGVPKPVMTPQQRRLSMARRTAASLGYNECVSYTFIDQASAA 524
Query: 528 DFSQNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDK 587
F + +E NPIS + + MR L+ L+ N R + LFE V+ H
Sbjct: 525 LFGGGTDATMLE--NPISSEMSHMRPDLLPGLLAAAARNQARGFADLALFEAGPVF-HGG 581
Query: 588 FIKDSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFF----PIKL 643
+ ++G + V GP + G R +D +D K D E + P K+
Sbjct: 582 EPGEQRAQIAG------LLVGRTGP--KDVHGAA-RAVDLYDAKADAEAVLAAMGAPAKV 632
Query: 644 NFLKINNSILHPNRSALIFKKTKNI-GFIGEIHPILQQKYDLPLAPIFFEV--DALELQK 700
L+ + HP R I K + G GE+HP + Q D+ + F + + + L +
Sbjct: 633 QILRDGDGWWHPGRHGRICLGPKKVLGVFGELHPRVLQAMDVKGPAVAFVLWPEEVPLPR 692
Query: 701 RQIPNY--IQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKY 758
+ + + V RD F+ + + +++ ++ +I+ + +FD++
Sbjct: 693 KSGTTRAALALRDLQAVERDFAFVVDAGVEALTLVNAAA-----GADKALIEDVRVFDEF 747
Query: 759 CGKKLKDNEKSFAFRCILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLR 808
G L + +KS A LQ + TLK V K LR
Sbjct: 748 IGGSLGEGKKSLAITVRLQPTETTLKEKDIEAVSAKIVEKVAKATGGTLR 797
>TIGR_CMR|NSE_0426 [details] [associations]
symbol:NSE_0426 "putative phenylalanyl-tRNA synthetase,
beta subunit" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
GO:GO:0008033 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
SUPFAM:SSF50249 eggNOG:COG0072 EMBL:CP000237
GenomeReviews:CP000237_GR SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890
Gene3D:3.30.56.20 OMA:MKFSEQW Gene3D:3.50.40.10 InterPro:IPR020825
SUPFAM:SSF56037 HOGENOM:HOG000292085 RefSeq:YP_506312.1
ProteinModelPortal:Q2GDY4 STRING:Q2GDY4 GeneID:3931921
KEGG:nse:NSE_0426 PATRIC:22680907 ProtClustDB:CLSK2527637
BioCyc:NSEN222891:GHFU-448-MONOMER Uniprot:Q2GDY4
Length = 876
Score = 277 (102.6 bits), Expect = 3.5e-55, Sum P(3) = 3.5e-55
Identities = 99/332 (29%), Positives = 157/332 (47%)
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLPITVSKISPIKEGYQSLFSIRHQL 507
IF V+PP+ R D+ R+YG+ + S P+ SKI I E + IR L
Sbjct: 537 IFRVVPPSWRSDVITQACIAEELLRVYGYAQLR-STPLK-SKIPVIFETSKE-DRIRELL 593
Query: 508 AFADYQEVINYSFIEDSLEKDFSQNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNL 567
+ EV+ + FI EK S N N I+ NP+ +FN MR ++I +LV N+
Sbjct: 594 LNRGFSEVVTWPFIS---EKKCSANENILRIK--NPLGAEFNVMRPSIIPNLVEVAQRNI 648
Query: 568 KRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDY 627
K L I++FEI +Y T+ E K +A + YG E+ +D+
Sbjct: 649 KNGLHVIKIFEIGKIYS----------TIC---EKKMLAGLIYGDSFPRNMHEKAHKMDF 695
Query: 628 FDLKNDLENLFFPIKL----NFLKINN-SILHPNRSALIFKKTKNIGFIGEIHPILQQKY 682
FD K D+E L + L +F K + S+ HP + + + + K +GFIGE+HP +
Sbjct: 696 FDAKADVEALLTSLDLGGRYSFEKCDGPSLYHPGKVSNVKIEGKEVGFIGELHPRVASNR 755
Query: 683 DLPLAPIFFEVDALELQKRQIPNYIQISKFPNVVRDIVFIFNKN-INLQ-DVMDTMFFEK 740
+ + +F + A L+ ++ N KFP V RD F+F+ + + L D+ ++
Sbjct: 756 QITIFELFLDKLACNLKLKE--N--TFGKFPIVERDFSFVFDLDKVPLWGDIERGLYLIS 811
Query: 741 NNNSNCFIIQSISLFDKYCGKKLKDNEKSFAF 772
+ I++++LFDKY G S AF
Sbjct: 812 D------FIKNVTLFDKYEGDFKGKRMLSLAF 837
Score = 237 (88.5 bits), Expect = 3.5e-55, Sum P(3) = 3.5e-55
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 163 VIKLTPNRGDCL--SLLGIAREISILSNTPLKLLNTKITLPNYKEILPVKISAIDLCGRF 220
V +TPN G + S L ++ +++ LL + + IL I C +F
Sbjct: 207 VENITPNHGSNVLSSPLTDSQGSAVVDELASNLLKKDANVEDDANIL-FNICDSTACRKF 265
Query: 221 SGRIIRGINPKALTPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGE- 279
SG +IR + ++P W++ ++E G K +S L DI NYVM G+P++I+DL KI+GE
Sbjct: 266 SGLVIRNVK-NCVSPDWLRNKVERVGVKSISALVDIANYVMFSYGLPLHIYDLDKIAGET 324
Query: 280 LNIRWGNIGETXXXXXXXXXXXX--XXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYL 337
L + + E+ ++ +++GII + TL+T++I++
Sbjct: 325 LQVSVSD-EESYLAALNDKEYRVPPGSIIIRDRDMQLQAVAGIIGSKLGACTLSTRNIFI 383
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEIC 388
A + P + + TES+YRFERG+D T K L LI ++C
Sbjct: 384 EAAVFNPVMVASTKRAMKINTESAYRFERGVDPYFTEKALVLAAQLISDVC 434
Score = 190 (71.9 bits), Expect = 3.5e-55, Sum P(3) = 3.5e-55
Identities = 60/185 (32%), Positives = 84/185 (45%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ WL ++ LS + L G E E + HP D
Sbjct: 1 MKFTFGWLLEHLDTTLSLEQVVEALISLGFEVENCHS---IGRGFIVAQVTECNKHPGAD 57
Query: 61 NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY 120
+CKV L IVC PN+R GLKV A +G+ L C N K I K +S
Sbjct: 58 RLTLCKVFDGTQELQIVCGAPNVRGGLKVVLAQVGAVLPC-NMMK---IKKSKIRGCESL 113
Query: 121 GLLCSEYDLKINNKNKY-LFELPEDAPIGKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGI 179
G+LCS +L + +K + EL +D +G D + + L I +TPNRGD LS+ G+
Sbjct: 114 GMLCSLEELGLPGGDKGGIIELSDDYRVG----DAFTVDPL-IEIAVTPNRGDMLSVYGV 168
Query: 180 AREIS 184
ARE++
Sbjct: 169 ARELA 173
Score = 37 (18.1 bits), Expect = 7.0e-30, Sum P(3) = 7.0e-30
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 548 FNTMRSTLIGSLVNNICYNLKRKLE 572
F L L++++C K K+E
Sbjct: 418 FTEKALVLAAQLISDVCAGEKEKIE 442
>TIGR_CMR|APH_0305 [details] [associations]
symbol:APH_0305 "phenylalanyl-tRNA synthetase, beta
subunit" species:212042 "Anaplasma phagocytophilum HZ" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=ISS] [GO:0009328 "phenylalanine-tRNA
ligase complex" evidence=ISS] HAMAP:MF_00283 InterPro:IPR002547
InterPro:IPR004532 InterPro:IPR005121 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF01588 Pfam:PF03147
Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886 PROSITE:PS51447
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 SMART:SM00896
GO:GO:0005524 GO:GO:0005737 GO:GO:0000287 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0008033 Gene3D:2.40.50.140
InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249 eggNOG:COG0072
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 Gene3D:3.30.70.380
SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20 OMA:MKFSEQW
ProtClustDB:PRK00629 Gene3D:3.50.40.10 InterPro:IPR020825
SUPFAM:SSF56037 TIGRFAMs:TIGR00472 HOGENOM:HOG000292085
RefSeq:YP_504917.1 ProteinModelPortal:Q2GL34 STRING:Q2GL34
GeneID:3930260 KEGG:aph:APH_0305 PATRIC:20949184
BioCyc:APHA212042:GHPM-335-MONOMER Uniprot:Q2GL34
Length = 792
Score = 537 (194.1 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 199/831 (23%), Positives = 359/831 (43%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDID 60
M+ +WL ++ S+ L + L+ G+E +E HPD
Sbjct: 1 MRFAYSWLLDCLDAGCSAQVLVDELSSIGVEAALVE-GGVKQGSFVVAKVLEVLAHPDAH 59
Query: 61 NFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSY 120
+CKV +L IVC N+R G+ A +G+ + ++ I+ I+S
Sbjct: 60 KLKVCKVYDGVEVLQIVCGASNVRSGMITVLARVGAYI----QESGITISKAVIRGIESS 115
Query: 121 GLLCSEYDLKINNK---NKYLFELPEDAP--IGKNFYDYYKFNNLKFVIKLTPNRGDCLS 175
G+LCS +L +++ + + +L E + +G++F + + +TPNRGDCL
Sbjct: 116 GMLCSLEELGMSSSWDPSSGIVDLSESSEYAVGEDFIPQEEI----IEVSVTPNRGDCLG 171
Query: 176 LLGIAREISILSNTPLKLL-----NTKITLPNYKEILPVKISAIDLCGRFSGRIIRGINP 230
+ GIARE++ LK L + + P++ L +++ G G I+ I+
Sbjct: 172 VYGIARELAAAGMGSLKELPVVGGDAALCKPSFA--LDMRVD-----GLIMGCSIKSISN 224
Query: 231 KALTPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGE-LNIRWGNIGE 289
K+ +P+W++ RL +G K VS + DI NYVM+ L P++++D KI G L + G+
Sbjct: 225 KSASPRWIRERLLAAGVKTVSCVVDIVNYVMMLLNRPMHVYDADKIKGAALIVEKVARGD 284
Query: 290 TXXXXXXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRG 349
+ ++GI+ + T +T++I++ A++ P I
Sbjct: 285 CIAINGKKYELAGDVVIRDADGI-VHCIAGIMGSEQSKCTSDTENIFIESAWYDPVDIAL 343
Query: 350 KSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRK 409
S L T+SSYRF R +D L LI + CG
Sbjct: 344 SSRRLRLNTDSSYRFARYVDPKLVGFGLNYAAYLISKYCGGEVSEVVISGSAPNKAA--- 400
Query: 410 EIKVRSERVIKILGIKLTNQEISNIFIRLKFHF-IQKNNIFLVIPPAHRFDLXXXXXXXX 468
I+ E V KI + + + I +I L F ++ V P+ R D+
Sbjct: 401 HIEFDPEIVSKIGSVSIDRERILSILESLGFVIDAASGELWRVEVPSWRNDVSSPHDLVE 460
Query: 469 XXXRIYGFENIPIS--LPITV--SKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDS 524
RI+G++ I LP V K + + + + +R + EVI +SF+ +
Sbjct: 461 EVLRIHGYDAIQEQEVLPARVLERKANAVDDSLNN--RVRASMLSQGLTEVITWSFLAGA 518
Query: 525 LEKDFSQNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYL 584
+ + ++ + I+ NPIS +FN MR +++ +L+ + N + I +FE+ +VY+
Sbjct: 519 VVEKMGFSVEDLYID--NPISNQFNVMRPSVLPNLLQVVSNNQACGRDSISVFELGDVYI 576
Query: 585 HDKFIKDSPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLF--FPIK 642
+ S V G + + + + R D+FD+K D+E +F F I
Sbjct: 577 A---LDRSDCVVCGVRAGNDLPRNPHASI---------RKFDFFDVKADIERVFLQFGIS 624
Query: 643 ---LNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEV--DALE 697
L F LHP+RSA ++ + G++GE+HP + ++L FEV L
Sbjct: 625 EADLEFRASTRDYLHPSRSADVYCQGLLCGYVGELHPSFVEFFELKDKVACFEVFLSGLS 684
Query: 698 LQKRQIPNYIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDK 757
Q+ ++ ++K+ V RD FI +K I ++++ + + ++ +S+FD
Sbjct: 685 SQEEKVRGGFFLNKYQVVKRDFAFILDKEIKARELVTVIKAVR-------YVEDVSVFDV 737
Query: 758 YCGKKLKDNEKSFAFRCILQDPKKTLKXXXXXXXXXXXXXSVCKNFNAKLR 808
Y G + + + S A ++ T+ SV + + +LR
Sbjct: 738 YSGVNIPEGKVSIAVAVVITSGLGTMTEAEIKEVSDSIIESVKRELHGQLR 788
>UNIPROTKB|P94985 [details] [associations]
symbol:pheT "Phenylalanine--tRNA ligase beta subunit"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF01588 Pfam:PF03147 Pfam:PF03483 Pfam:PF03484 PROSITE:PS50886
PROSITE:PS51447 PROSITE:PS51483 SMART:SM00873 SMART:SM00874
SMART:SM00896 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 EMBL:BX842577 GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472 PIR:E70620
RefSeq:NP_216166.1 RefSeq:NP_336143.1 RefSeq:YP_006515041.1
ProteinModelPortal:P94985 SMR:P94985 PRIDE:P94985
EnsemblBacteria:EBMYCT00000001208 EnsemblBacteria:EBMYCT00000072311
GeneID:13316431 GeneID:885283 GeneID:924354 KEGG:mtc:MT1688
KEGG:mtu:Rv1650 KEGG:mtv:RVBD_1650 PATRIC:18125474
TubercuList:Rv1650 HOGENOM:HOG000292086 Uniprot:P94985
Length = 831
Score = 377 (137.8 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 146/623 (23%), Positives = 258/623 (41%)
Query: 219 RFSGRIIRGINPKALTPKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISG 278
RF+ R + GI+P A++P W++ RL G + D+TNYVMLELG P++ D ++ISG
Sbjct: 225 RFALRPVIGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISG 284
Query: 279 ELNIRWGNIGETXXXXXXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLG 338
L +R+ GET ++ G++ V ++ D+ L
Sbjct: 285 TLGVRFARSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLE 344
Query: 339 VAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXX 398
A W P ++ +L +E++ R+ER +D + ++ L+R L+ +I G
Sbjct: 345 AAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTD 404
Query: 399 XXXXXNI------PVRKEIKVRSERVIKILGIKLTNQEISNIFIRLKFHFIQKNNIFLVI 452
P+R + V +I G+ + ++ + V
Sbjct: 405 WRGDPPCDDWSPPPIRMGVDVPD----RIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVT 460
Query: 453 PPAHRFDLXXXXXXXXXXXRIYGFENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADY 512
PP+ R DL R+ G E IP LP + + G Q +I LA + Y
Sbjct: 461 PPSWRPDLRQPADLVEEVLRLEGLEVIPSVLPPAPAGRG-LTAGQQRRRTIGRSLALSGY 519
Query: 513 QEVINYSFIE----D--SLEKDFSQNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYN 566
E++ F+ D LE D S+ + +LNP+ + +TL+ +L+ + N
Sbjct: 520 VEILPTPFLPAGVFDLWGLEADDSRRMTT---RVLNPLEADRPQLATTLLPALLEALVRN 576
Query: 567 LKRKLERIRLFEIANVYLH------------DKFIKDSPFTV---SGYKELKKIAVIAYG 611
+ R L + LF IA V D+ D + S ++ + +A + G
Sbjct: 577 VSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAG 636
Query: 612 PLLEPQ--WGEENRNIDYFDLKNDLENLFFPIKLNFLKINNSIL--HPNRSALIFKKTKN 667
L EP+ WG R ++ D + + +++ L HP R A +F +
Sbjct: 637 -LREPRGPWGP-GRPVEAADAFEAVRIIARASRVDVTLRPAQYLPWHPGRCAQVFVGESS 694
Query: 668 IGFIGEIHPILQQKYDLPLAPIFFEV--DALELQKRQIPNYIQISKFPNVVRDIVFIFNK 725
+G G++HP + ++ LP E+ DA+ +P ++S +P V +D+ +
Sbjct: 695 VGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSA-PLPAP-RVSPYPAVFQDVSLVVAA 752
Query: 726 NINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKKLKDNEKSFAFRCILQDPKKTLKX 785
+I Q V D + + +++ I+LFD + G ++ ++ KS F + P +TL
Sbjct: 753 DIPAQAVADAVRAGAGD-----LLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807
Query: 786 XXXXXXXXXXXXSVCKNFNAKLR 808
S + A LR
Sbjct: 808 DDASAARDAAVQSAAERVGAVLR 830
Score = 334 (122.6 bits), Expect = 9.5e-27, P = 9.5e-27
Identities = 90/330 (27%), Positives = 157/330 (47%)
Query: 65 CKVDTY-KNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKSYGLL 123
C VD + +I+C N VG V A+ G++L F I+ K Y S G++
Sbjct: 71 CAVDIGDRQYREIICGATNFAVGDLVVVALPGATL-----PGGFTISARKAYGRNSDGMI 125
Query: 124 CSEYDLKINNKNKYLFELPEDAPI-GKNFYDYYKFNNLKFVIKLTPNRGDCLSLLGIARE 182
CS +L + + + LP A G + +++ F + +TP+RG C+S+ G+ARE
Sbjct: 126 CSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYCMSVRGLARE 185
Query: 183 ISILSNTPL--KLLNTKIT-LPNYKEILPVKISAIDLCGRFSGRIIRGINPKALTPKWMK 239
++ + N+++ LP P+ + RF+ R + GI+P A++P W++
Sbjct: 186 LACAYDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPVIGIDPAAVSPWWLQ 245
Query: 240 IRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETXXXXXXXXX 299
RL G + D+TNYVMLELG P++ D ++ISG L +R+ GET
Sbjct: 246 RRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTLDGIER 305
Query: 300 XXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTE 359
++ G++ V ++ D+ L A W P ++ +L +E
Sbjct: 306 KLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSE 365
Query: 360 SSYRFERGIDFSKTIKCLERVTNLIIEICG 389
++ R+ER +D + ++ L+R L+ +I G
Sbjct: 366 AARRYERTVDPAISVAALDRCARLLADIAG 395
>TIGR_CMR|CJE_0975 [details] [associations]
symbol:CJE_0975 "phenylalanyl-tRNA synthetase, beta
subunit" species:195099 "Campylobacter jejuni RM1221" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] HAMAP:MF_00283
InterPro:IPR002547 InterPro:IPR003583 InterPro:IPR004532
InterPro:IPR005121 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF01588 Pfam:PF03147 Pfam:PF03483
Pfam:PF03484 PROSITE:PS50886 PROSITE:PS51447 PROSITE:PS51483
SMART:SM00278 SMART:SM00873 SMART:SM00874 SMART:SM00896
GO:GO:0005524 GO:GO:0005737 GO:GO:0000287 GO:GO:0003677
GO:GO:0006281 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0008033
Gene3D:2.40.50.140 InterPro:IPR012340 eggNOG:COG0073 GO:GO:0000049
SUPFAM:SSF50249 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
Gene3D:3.30.70.380 SUPFAM:SSF54991 KO:K01890 Gene3D:3.30.56.20
OMA:MKFSEQW ProtClustDB:PRK00629 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 TIGRFAMs:TIGR00472
RefSeq:YP_178973.1 ProteinModelPortal:Q5HUR2 STRING:Q5HUR2
GeneID:3231486 KEGG:cjr:CJE0975 PATRIC:20043733
HOGENOM:HOG000103595 BioCyc:CJEJ195099:GJC0-995-MONOMER
Uniprot:Q5HUR2
Length = 773
Score = 369 (135.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 179/785 (22%), Positives = 327/785 (41%)
Query: 1 MQIPENWLRTIIN-PKLSSNDLANLLTMSGLETEKIETNXXXXXXXXXXXXXXXXXHPDI 59
M I ++WL + ++SS+ +A L G+E +++ H +
Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGA-LKAPDKVVVGYVKEKIKHENS 59
Query: 60 DNFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKYKIKS 119
D +IC+VD L IVC N+ G V A G+ + I K + S
Sbjct: 60 DKLSICQVDIGSETLQIVCGAANVDAGQFVAVATKGAIM-----PNGMEIKEAKLRGVDS 114
Query: 120 YGLLCSEYDLKINNKNKYLFELPEDA---PIGKNFYDYYKFNNLKFVIKLTPNRGDCLSL 176
G+LCS +L N+ + L E +G+ Y FN+ ++LTPNRGDCLS+
Sbjct: 115 CGMLCSSLELGFEKINEGIMLLDESIGKLELGRPLNTYEIFNDELIEVELTPNRGDCLSI 174
Query: 177 LGIAREISILSNTPLKLLNTKITLPNYKEILPV-KISAI-DLCGRFSGRIIRGINPKALT 234
GIAR+++ N LK N I + +++A +L G ++ R I G+ + T
Sbjct: 175 YGIARDLAAALNLNLKEPKPFKESENVLGIGRILRLAAEKELNGLYNYRAI-GLKEEIQT 233
Query: 235 PKWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISGELNIRWGNIGETXXXX 294
+ +RL + + ++ NY G+ N +DLS S E
Sbjct: 234 NLLLSLRLAQIEGLGKNSIENLLNYATHSTGVLFNAYDLSSFS-----------EKDEEF 282
Query: 295 XXXXXXXXXXXXXXXXXFKIISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIR-GKSNH 353
K++S SGI ++ ++K I + + P I K H
Sbjct: 283 IINLSKQVHGETKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLVIADAKIYH 342
Query: 354 YNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKV 413
+ + YR RG + K ++ + + I +P+ I +
Sbjct: 343 KDQDEKMLYRSFRGSE-PKLNLGMDFLLGIFEHIPNLVIYSSSQQILTDKELPI---IPI 398
Query: 414 RSERVIKILGIKLTNQEISNIFIRLKFHFIQKNN-IFLVIPPAHRFDLXXXXXXXXXXXR 472
E + I+G + E+ I +L F I + V P HR D+ R
Sbjct: 399 SIEGISDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLSDICEEVVR 458
Query: 473 IYGFENIPIS-LP-ITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFS 530
I G +NI L I ++++ + Y ++R + + Y E ++Y + D+ E+
Sbjct: 459 IIGIDNIASKGLEFIEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHY--VLDNGEELKR 516
Query: 531 QNINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVY-LHDKFI 589
++ ++L+NPI+ + NT+R+TL+ L+N N K + I+LFE+ V+ ++++ +
Sbjct: 517 LGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELGAVFNVNNQEL 576
Query: 590 KDSPFTVSGYKELKKIAVIAYGPLLE-PQWGEENRNI-DYFDLKNDLENLFFPIKLNFLK 647
F SG KE KI+ A ++ + + +NI F LK+ N+ P + +
Sbjct: 577 NRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKYNILSPYEQADIY 636
Query: 648 INN-SILHPNRSALIFKKTKNIG--FIGEIH-PILQQKYDLPLAPIFFEVDALELQKRQ- 702
+++ + R L + +++ +I E+ +++Q D +A + + A+
Sbjct: 637 LSDIKVGFIGRLHLKIENERDLPKTYICELDLDLIRQ--DFKIAKPYSKFPAITRDLSVL 694
Query: 703 IPNYIQISKFPNVVRDIVFIFNKNINLQDVMDTMFFEKNNNSNCFIIQSISLFDKYCGKK 762
IP + ++ N + ++ +N L D+ + ++N I S S D K
Sbjct: 695 IPKGFEYNQIKNCIEELNLEILENFRLVDI----YSDENLKEFYSITISFSFRD--INKT 748
Query: 763 LKDNE 767
L+DN+
Sbjct: 749 LEDNQ 753
>UNIPROTKB|Q9NSD9 [details] [associations]
symbol:FARSB "Phenylalanine--tRNA ligase beta subunit"
species:9606 "Homo sapiens" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 GO:GO:0005829 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 GO:GO:0006418 eggNOG:COG0072 DrugBank:DB00120
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 EMBL:AC104772 PDB:3L4G
PDBsum:3L4G BRENDA:6.1.1.20 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 EMBL:D84430 EMBL:AF042346 EMBL:AF161521
EMBL:AC097461 EMBL:BC017783 IPI:IPI00300074 RefSeq:NP_005678.3
UniGene:Hs.471452 ProteinModelPortal:Q9NSD9 SMR:Q9NSD9
DIP:DIP-32869N IntAct:Q9NSD9 STRING:Q9NSD9 PhosphoSite:Q9NSD9
DMDM:296452943 PaxDb:Q9NSD9 PRIDE:Q9NSD9 Ensembl:ENST00000281828
GeneID:10056 KEGG:hsa:10056 UCSC:uc002vne.1 CTD:10056
GeneCards:GC02M223435 H-InvDB:HIX0002878 HGNC:HGNC:17800
HPA:HPA036678 MIM:609690 neXtProt:NX_Q9NSD9 PharmGKB:PA162388068
HOVERGEN:HBG009523 InParanoid:Q9NSD9 OrthoDB:EOG4FXR74
PhylomeDB:Q9NSD9 ChiTaRS:FARSB GenomeRNAi:10056 NextBio:37993
ArrayExpress:Q9NSD9 Bgee:Q9NSD9 CleanEx:HS_FARSB
Genevestigator:Q9NSD9 GermOnline:ENSG00000116120 Uniprot:Q9NSD9
Length = 589
Score = 224 (83.9 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 93/374 (24%), Positives = 163/374 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G + + T + + G DF+K L+ + + E C
Sbjct: 228 GVVLSMPPIINGDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAA 287
Query: 398 X-------XXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI-QKNN 447
+ RKE+ VR++ + K +GI+ T + ++ + R LK I N
Sbjct: 288 EVVFPNGKSHTFPELAYRKEM-VRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQ 346
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + IPP R D+ YG+ NI ++LP T++ P+ + + L RH
Sbjct: 347 IEIEIPPT-RADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELL---RH 402
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGSLVNN 562
+A A + E + ++ ED +K +I+ + + NP + +F R+TL+ L+
Sbjct: 403 DMAAAGFTEALTFALCSQEDIADK-LGVDISATKAVHISNPKTAEFQVARTTLLPGLLKT 461
Query: 563 ICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGE 620
I N K L ++LFEI+++ IKDS V G K + + + Y P E G
Sbjct: 462 IAANRKMPLP-LKLFEISDIV-----IKDSNTDV-GAKNYRHLCAVYYNKNPGFEIIHGL 514
Query: 621 ENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQ 680
+R + D+ + + IK + P R A IF + +++G +G +HP +
Sbjct: 515 LDRIMQLLDVPPGEDKGGYVIKAS----EGPAFFPGRCAEIFARGQSVGKLGVLHPDVIT 570
Query: 681 KYDLPLAPIFFEVD 694
K++L + E++
Sbjct: 571 KFELTMPCSSLEIN 584
Score = 56 (24.8 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ IING + +T+NT++I++
Sbjct: 230 VLSMPPIINGDHSRITVNTRNIFI 253
Score = 47 (21.6 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 32/120 (26%), Positives = 48/120 (40%)
Query: 162 FVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILPV-KISAIDLCGRF 220
+ I + NR D L L G+ R + + +I P YK ++P KI + +
Sbjct: 63 YKIDVPANRYDLLCLEGLVRGLQVFKE--------RIKAPVYKRVMPDGKIQKLIITEET 114
Query: 221 SGRIIRGINPKALTP--KWMKIRLEDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISG 278
+ IR A+ K+ K R DS +L LH N + I DL +SG
Sbjct: 115 AK--IRPFAVAAVLRNIKFTKDRY-DSFIELQEKLHQ--NICRKRALVAIGTHDLDTLSG 169
>UNIPROTKB|F5H6Y1 [details] [associations]
symbol:FARSB "Phenylalanine--tRNA ligase beta subunit"
species:9606 "Homo sapiens" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 EMBL:AC104772 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
InterPro:IPR020825 SUPFAM:SSF56037 EMBL:AC097461 HGNC:HGNC:17800
ChiTaRS:FARSB IPI:IPI01009249 ProteinModelPortal:F5H6Y1 SMR:F5H6Y1
Ensembl:ENST00000536361 ArrayExpress:F5H6Y1 Bgee:F5H6Y1
Uniprot:F5H6Y1
Length = 490
Score = 224 (83.9 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 93/374 (24%), Positives = 163/374 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G + + T + + G DF+K L+ + + E C
Sbjct: 129 GVVLSMPPIINGDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAA 188
Query: 398 X-------XXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI-QKNN 447
+ RKE+ VR++ + K +GI+ T + ++ + R LK I N
Sbjct: 189 EVVFPNGKSHTFPELAYRKEM-VRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQ 247
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + IPP R D+ YG+ NI ++LP T++ P+ + + L RH
Sbjct: 248 IEIEIPPT-RADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELL---RH 303
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGSLVNN 562
+A A + E + ++ ED +K +I+ + + NP + +F R+TL+ L+
Sbjct: 304 DMAAAGFTEALTFALCSQEDIADK-LGVDISATKAVHISNPKTAEFQVARTTLLPGLLKT 362
Query: 563 ICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGE 620
I N K L ++LFEI+++ IKDS V G K + + + Y P E G
Sbjct: 363 IAANRKMPLP-LKLFEISDIV-----IKDSNTDV-GAKNYRHLCAVYYNKNPGFEIIHGL 415
Query: 621 ENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQ 680
+R + D+ + + IK + P R A IF + +++G +G +HP +
Sbjct: 416 LDRIMQLLDVPPGEDKGGYVIKAS----EGPAFFPGRCAEIFARGQSVGKLGVLHPDVIT 471
Query: 681 KYDLPLAPIFFEVD 694
K++L + E++
Sbjct: 472 KFELTMPCSSLEIN 485
Score = 56 (24.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ IING + +T+NT++I++
Sbjct: 131 VLSMPPIINGDHSRITVNTRNIFI 154
>MGI|MGI:1346035 [details] [associations]
symbol:Farsb "phenylalanyl-tRNA synthetase, beta subunit"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA
ligase activity" evidence=IEA] [GO:0004826 "phenylalanine-tRNA
ligase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 MGI:MGI:1346035
GO:GO:0005524 GO:GO:0005737 GO:GO:0000287 GO:GO:0003723
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 HOVERGEN:HBG009523 OrthoDB:EOG4FXR74
EMBL:AF123263 EMBL:AK010271 EMBL:AK045432 EMBL:BC016428
IPI:IPI00322828 RefSeq:NP_035941.2 UniGene:Mm.28922
UniGene:Mm.447792 ProteinModelPortal:Q9WUA2 SMR:Q9WUA2
STRING:Q9WUA2 PhosphoSite:Q9WUA2 PaxDb:Q9WUA2 PRIDE:Q9WUA2
Ensembl:ENSMUST00000068333 Ensembl:ENSMUST00000170217 GeneID:23874
KEGG:mmu:23874 InParanoid:Q9CWZ8 NextBio:303591 Bgee:Q9WUA2
CleanEx:MM_FARSB Genevestigator:Q9WUA2
GermOnline:ENSMUSG00000026245 Uniprot:Q9WUA2
Length = 589
Score = 216 (81.1 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 96/374 (25%), Positives = 163/374 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G + + T + + G DF+K L+ + + E C
Sbjct: 228 GVVLSMPPIINGNHSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAV 287
Query: 398 X-------XXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI-QKNN 447
+P RKE+ VR++ + K +GI+ T ++ + R LK I N
Sbjct: 288 EVVSPNGKSSTFPELPYRKEM-VRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDGNQ 346
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + IPP R D+ YG+ NI ++LP T++ P+ + + L R
Sbjct: 347 IEVEIPPT-RADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELL---RL 402
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGSLVNN 562
+A A + E + ++ ED +K +I+ + + NP + +F R+TL+ L+
Sbjct: 403 DMAAAGFTEALTFALCSQEDIADK-LGLDISATKAVHISNPKTAEFQVARTTLLPGLLKT 461
Query: 563 ICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGE 620
I N K L ++LFEI++V +KDS V G K + + + Y P E G
Sbjct: 462 IAANRKMPLP-LKLFEISDVV-----VKDSGKDV-GAKNYRHLCAVYYNKTPGFEIIHGL 514
Query: 621 ENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQ 680
+R + D+ E+ + IK + S P R A IF ++IG +G +HP +
Sbjct: 515 LDRIMQLLDVPPGEESGGYMIKASA----GSAFFPGRCAEIFVGGQSIGKLGVLHPDVIT 570
Query: 681 KYDLPLAPIFFEVD 694
K++L + E++
Sbjct: 571 KFELTMPCSSLEIN 584
Score = 57 (25.1 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ IING + +T+NT++I++
Sbjct: 230 VLSMPPIINGNHSKITVNTRNIFI 253
Score = 52 (23.4 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 22/109 (20%), Positives = 47/109 (43%)
Query: 101 INKKKSFIIN-IEKKYKIKSYGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNN 159
++ K+ + + + Y + + LC E+ L+++ + ++ GK +
Sbjct: 4 VSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGHGKA---QGASDV 60
Query: 160 LKFVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILP 208
+ + I + NR D L L G+AR + + +I P YK ++P
Sbjct: 61 VLYKIDVPANRYDLLCLEGLARGLQVFKE--------RIKAPVYKRVMP 101
>UNIPROTKB|Q5ZJ61 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 GeneTree:ENSGT00530000063489
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 InterPro:IPR020825 SUPFAM:SSF56037 CTD:10056
HOVERGEN:HBG009523 OrthoDB:EOG4FXR74 EMBL:AADN02024149
EMBL:AJ720573 IPI:IPI00593920 RefSeq:NP_001006543.1
UniGene:Gga.6269 STRING:Q5ZJ61 Ensembl:ENSGALT00000008412
GeneID:424812 KEGG:gga:424812 InParanoid:Q5ZJ61 NextBio:20827088
Uniprot:Q5ZJ61
Length = 589
Score = 214 (80.4 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 97/374 (25%), Positives = 162/374 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICG---TXXXX 394
GV P I G + +L T + + G D +K L+ + + E C T
Sbjct: 229 GVVLSMPPIINGDHSKISLKTRNVFIECTGTDMTKAKIVLDIIVTMFSEYCEKQFTVEAV 288
Query: 395 XXXXXXXXXNI-P---VRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFIQK-NN 447
+I P RKE KV+ E + K LGI T ++ + R L H NN
Sbjct: 289 EVTYPNGKTHICPELAYRKE-KVKPELINKKLGISETPSSLAKLLTRMCLSSHVTGNGNN 347
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + IPP R D+ YG+ NI + +P T++ P+ + + L R
Sbjct: 348 IEVEIPPT-RADVIHACDIVEDAAIAYGYNNIQMVIPKTYTIANQLPLNKLTELL---RL 403
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGSLVNN 562
LA A + E + ++ ED +K +I+ + + NP + +F R+TL+ L+
Sbjct: 404 DLAAAGFTEALTFALCSTEDIADK-LGMDISATNAVHIANPKTAEFQVARTTLLPGLLKT 462
Query: 563 ICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGE 620
I N K L ++LFEI+++ + D KD G + + + I Y P E G
Sbjct: 463 IAANRKMPLP-LKLFEISDIVVKDP-TKDV-----GARNYRHLCAIYYNKSPGFEIIHGL 515
Query: 621 ENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQ 680
+R + ++ + EN + IK S P R A IF + +++G +G +HP +
Sbjct: 516 LDRVMQLLEVPPNEEN-GYTIKAT----EGSAFFPGRCAEIFARGQSVGKLGVLHPDVIT 570
Query: 681 KYDLPLAPIFFEVD 694
K++L + E++
Sbjct: 571 KFELTMPCSALEIN 584
Score = 62 (26.9 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 23/111 (20%), Positives = 47/111 (42%)
Query: 101 INKKKSFIIN-IEKKYKIKSYGLLCSEYDLKINNKNKYLFELPEDAPIGKNFYDYYKFNN 159
+ K+ + + + Y + + LC E+ L+++ + ++ GK
Sbjct: 4 VGVKRDLLFEALGRSYTDEEFNDLCFEFGLELDEVTSEKDIISKEKGEGKA---EGASET 60
Query: 160 LKFVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILPVK 210
+ + I + NR D L L G+ R + + +I LP Y++I+P K
Sbjct: 61 VLYKIDVPANRYDLLCLEGLVRGLQVFKE--------RINLPRYEKIIPAK 103
Score = 49 (22.3 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 7/24 (29%), Positives = 18/24 (75%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ IING + ++L T+++++
Sbjct: 231 VLSMPPIINGDHSKISLKTRNVFI 254
>RGD|1303210 [details] [associations]
symbol:Farsb "phenylalanyl-tRNA synthetase, beta subunit"
species:10116 "Rattus norvegicus" [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 RGD:1303210
GO:GO:0005524 GO:GO:0005737 GO:GO:0000287 GO:GO:0003723
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 HOVERGEN:HBG009523 OrthoDB:EOG4FXR74
EMBL:BC079364 IPI:IPI00202379 RefSeq:NP_001004252.1
UniGene:Rn.17054 IntAct:Q68FT7 STRING:Q68FT7
Ensembl:ENSRNOT00000019685 GeneID:301544 KEGG:rno:301544
UCSC:RGD:1303210 InParanoid:Q68FT7 NextBio:648921
Genevestigator:Q68FT7 Uniprot:Q68FT7
Length = 589
Score = 215 (80.7 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 95/374 (25%), Positives = 161/374 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G + + T + + G D +K L+ + + E C
Sbjct: 228 GVVLSMPPIINGNHSKITVNTRNIFIECTGTDLTKAKIVLDIIVTMFSEYCENQFTVEAA 287
Query: 398 X-------XXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI-QKNN 447
+P RKE+ VR++ + K +GIK T ++ + R LK I N
Sbjct: 288 EVVSPSGKSSTLPELPYRKEM-VRADLINKKVGIKETPANLAKLLTRMCLKSEVIGDGNQ 346
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + IPP R D+ YG+ NI ++LP T++ P+ + + L R
Sbjct: 347 IEVEIPPT-RADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELL---RL 402
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGSLVNN 562
+A A + E + ++ ED +K NI+ + + NP + +F R+TL+ L+
Sbjct: 403 DMAAAGFTEALTFALCSQEDIADK-LGLNISATKAVHIGNPKTAEFQVARTTLLPGLLKT 461
Query: 563 ICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGE 620
I N K L ++LFEI+++ + D KD G K + + + Y P E G
Sbjct: 462 IAANRKMPLP-LKLFEISDIVVQDPS-KDV-----GAKNYRHLCAVYYNKNPGFEIIHGL 514
Query: 621 ENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQ 680
+R + D+ E+ + IK + S P R A IF ++IG +G +HP +
Sbjct: 515 LDRIMQLLDVPPGEESGGYVIKASA----GSAFFPGRCAEIFVGGQSIGKLGVLHPDVIT 570
Query: 681 KYDLPLAPIFFEVD 694
K++L + E++
Sbjct: 571 KFELTMPCSSLEIN 584
Score = 57 (25.1 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ IING + +T+NT++I++
Sbjct: 230 VLSMPPIINGNHSKITVNTRNIFI 253
Score = 52 (23.4 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 22/111 (19%), Positives = 45/111 (40%)
Query: 101 INKKKSFIINI-EKKYKIKSYGLLCSEYDLKINN--KNKYLFELPEDAPIGKNFYDYYKF 157
++ K+ + + + Y + + LC E+ L+++ K + + + D +
Sbjct: 4 VSVKRDLLFQVLGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGNVKAQGASDVVLY 63
Query: 158 NNLKFVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILP 208
I + NR D L L G+AR + + +I P YK ++P
Sbjct: 64 K-----IDVPANRYDLLCLEGLARGLQVFKE--------RIKAPVYKRVMP 101
>UNIPROTKB|A8E4P2 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 GeneTree:ENSGT00530000063489
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 InterPro:IPR020825 SUPFAM:SSF56037
HOVERGEN:HBG009523 OrthoDB:EOG4FXR74 EMBL:DAAA02006007
EMBL:BC151418 IPI:IPI00708080 RefSeq:NP_001098491.1
UniGene:Bt.89225 STRING:A8E4P2 Ensembl:ENSBTAT00000015473
GeneID:788792 KEGG:bta:788792 InParanoid:A8E4P2 NextBio:20929323
Uniprot:A8E4P2
Length = 589
Score = 213 (80.0 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 90/366 (24%), Positives = 160/366 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G + + T++ + G DF+K L+ + E C
Sbjct: 228 GVVLSMPPIINGNHSKITVNTKNVFIECTGTDFTKAKIVLDVIVTTFSEYCENQFTVEAA 287
Query: 398 XXX-------XXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI-QKNN 447
+ RKE+ VR++ + K +GI+ T + ++ + R LK I N
Sbjct: 288 EVVFPNGKLHTFPELAYRKEM-VRADLINKKVGIRETPENLAKLLTRMCLKSEVIGDGNQ 346
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + IPP R D+ YG+ NI ++LP T++ P+ + + L R
Sbjct: 347 IEVEIPPT-RADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELL---RQ 402
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGSLVNN 562
+A A + E + ++ ED +K +I+ + + NP + +F R+TL+ L+
Sbjct: 403 DMAAAGFTEALTFALCSQEDIADK-LGMDISATKAVHISNPKTAEFQVARTTLLPGLLKT 461
Query: 563 ICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGE 620
+ N K L ++LFEI+++ IKDS V G + + + + Y P E G
Sbjct: 462 LAANRKMPLP-LKLFEISDIV-----IKDSSRDV-GARNYRHLCAVYYNKNPGFEIIHGL 514
Query: 621 ENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQ 680
+R + D+ + + IK + + P R A IF + ++IG +G +HP +
Sbjct: 515 LDRIMQLLDVPPGEKKGGYAIKAS----EGPVFFPGRCAEIFARGQSIGKLGVLHPDVIT 570
Query: 681 KYDLPL 686
K++L +
Sbjct: 571 KFELTM 576
Score = 59 (25.8 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ IING + +T+NTK++++
Sbjct: 230 VLSMPPIINGNHSKITVNTKNVFI 253
Score = 47 (21.6 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 24/113 (21%), Positives = 46/113 (40%)
Query: 101 INKKKSFIIN-IEKKYKIKSYGLLCSEYDLKINN--KNKYLF--ELPEDAPIGKNFYDYY 155
++ K+ + + + Y + + LC E+ L+++ K + E + G + Y
Sbjct: 4 VSVKRDLLFRALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAHGASDVVLY 63
Query: 156 KFNNLKFVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILP 208
K I + NR D L L G+ R + + +I P YK ++P
Sbjct: 64 K-------IDVPANRYDLLCLEGLVRGLQVFKE--------RIKTPMYKRVMP 101
Score = 42 (19.8 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 254 HDITNYVMLELGIPINIFDLSKISG 278
H ++ V+ ++ +P N +DL + G
Sbjct: 55 HGASDVVLYKIDVPANRYDLLCLEG 79
Score = 41 (19.5 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 104 KKSFIINIEKKYKIKSYGLLCSEYDL-KINNKNKYLFELPEDAPIGKNFYD 153
KK I + K K Y C ++ K +N+ K+ + E+ P+ YD
Sbjct: 176 KKPSDIKFKPLNKSKEY-TACELMNIYKTDNQLKHYLHIIENKPLYPVIYD 225
>UNIPROTKB|F6XQ20 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GeneTree:ENSGT00530000063489 KO:K01890 OMA:FFPNRPD
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 EMBL:AAEX03018188
Ensembl:ENSCAFT00000025570 RefSeq:XP_536085.2 GeneID:478926
KEGG:cfa:478926 Uniprot:F6XQ20
Length = 589
Score = 210 (79.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 92/374 (24%), Positives = 162/374 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G + + T + + G DF+K L+ + + E C
Sbjct: 228 GVVLSMPPVINGNHSKITVNTRNVFIECTGTDFTKAKIVLDVIVTMFSEYCENQFMVEAA 287
Query: 398 X-------XXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI-QKNN 447
+ RKEI VR++ + K +GI+ T + I+ + R LK I N
Sbjct: 288 EVVFPNGKSYTFPELAYRKEI-VRADLINKKVGIRETPENIAKLLTRMYLKSEVIGDGNQ 346
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + IPP R D+ YG+ NI ++LP T++ P+ + + L R
Sbjct: 347 IEIEIPPT-RADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELL---RQ 402
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGSLVNN 562
+A A + E + ++ ED +K +I+ + + NP + +F R+TL+ L+
Sbjct: 403 DMAAAGFTEALTFALCSQEDIADK-LGLDISATKAVHISNPKTAEFQVARTTLLPGLLKT 461
Query: 563 ICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGE 620
I N K L ++LFEI+++ +KDS V G + + + + Y P E G
Sbjct: 462 IAANRKMPLP-LKLFEISDIV-----VKDSSRDV-GARNYRHLCAVYYNKNPGFEIIHGL 514
Query: 621 ENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQ 680
+R + ++ + + IK + S P R A I + ++IG +G +HP +
Sbjct: 515 LDRIMQLLNVPPGEKKGGYVIKAS----EGSAFFPGRCAEILARGQSIGKLGVLHPDVIT 570
Query: 681 KYDLPLAPIFFEVD 694
K++L + E++
Sbjct: 571 KFELTMPCSSLEIN 584
Score = 55 (24.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 7/24 (29%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ +ING + +T+NT+++++
Sbjct: 230 VLSMPPVINGNHSKITVNTRNVFI 253
Score = 45 (20.9 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 21/111 (18%), Positives = 43/111 (38%)
Query: 101 INKKKSFIIN-IEKKYKIKSYGLLCSEYDLKINN--KNKYLFELPEDAPIGKNFYDYYKF 157
++ K+ + + + Y + + LC E+ L+++ K + + + D +
Sbjct: 4 VSVKRDLLFQALGRNYTDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAEGASDVVLY 63
Query: 158 NNLKFVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILP 208
I + NR D L L G+ R + + +I P YK + P
Sbjct: 64 K-----IDVPANRYDLLCLEGLVRGLQVFKE--------RIKAPVYKRVTP 101
>UNIPROTKB|E2R6K4 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
InterPro:IPR020825 SUPFAM:SSF56037 Ensembl:ENSCAFT00000025570
Uniprot:E2R6K4
Length = 593
Score = 207 (77.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 93/378 (24%), Positives = 163/378 (43%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICG-------- 389
GV P I G + + T + + G DF+K L+ + + E C
Sbjct: 228 GVVLSMPPVINGNHSKITVNTRNVFIECTGTDFTKAKIVLDVIVTMFSEYCENQFINIVA 287
Query: 390 ---TXXXXXXXXXXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI- 443
T + RKEI VR++ + K +GI+ T + I+ + R LK I
Sbjct: 288 VRLTGTHESFSNFFFLKELAYRKEI-VRADLINKKVGIRETPENIAKLLTRMYLKSEVIG 346
Query: 444 QKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLF 501
N I + IPP R D+ YG+ NI ++LP T++ P+ + + L
Sbjct: 347 DGNQIEIEIPPT-RADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELL- 404
Query: 502 SIRHQLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKFNTMRSTLIGS 558
R +A A + E + ++ ED +K +I+ + + NP + +F R+TL+
Sbjct: 405 --RQDMAAAGFTEALTFALCSQEDIADK-LGLDISATKAVHISNPKTAEFQVARTTLLPG 461
Query: 559 LVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEP 616
L+ I N K L ++LFEI+++ +KDS V G + + + + Y P E
Sbjct: 462 LLKTIAANRKMPLP-LKLFEISDIV-----VKDSSRDV-GARNYRHLCAVYYNKNPGFEI 514
Query: 617 QWGEENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHP 676
G +R + ++ + + IK + S P R A I + ++IG +G +HP
Sbjct: 515 IHGLLDRIMQLLNVPPGEKKGGYVIKAS----EGSAFFPGRCAEILARGQSIGKLGVLHP 570
Query: 677 ILQQKYDLPLAPIFFEVD 694
+ K++L + E++
Sbjct: 571 DVITKFELTMPCSSLEIN 588
Score = 55 (24.4 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 7/24 (29%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ +ING + +T+NT+++++
Sbjct: 230 VLSMPPVINGNHSKITVNTRNVFI 253
Score = 45 (20.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 21/111 (18%), Positives = 43/111 (38%)
Query: 101 INKKKSFIIN-IEKKYKIKSYGLLCSEYDLKINN--KNKYLFELPEDAPIGKNFYDYYKF 157
++ K+ + + + Y + + LC E+ L+++ K + + + D +
Sbjct: 4 VSVKRDLLFQALGRNYTDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAEGASDVVLY 63
Query: 158 NNLKFVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILP 208
I + NR D L L G+ R + + +I P YK + P
Sbjct: 64 K-----IDVPANRYDLLCLEGLVRGLQVFKE--------RIKAPVYKRVTP 101
>ZFIN|ZDB-GENE-021206-2 [details] [associations]
symbol:farsb "phenylalanyl-tRNA synthetase, beta
subunit" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 ZFIN:ZDB-GENE-021206-2 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 HOGENOM:HOG000105095
KO:K01890 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 HOVERGEN:HBG009523 OrthoDB:EOG4FXR74
EMBL:BC085625 IPI:IPI00500527 RefSeq:NP_001007769.1
UniGene:Dr.75498 ProteinModelPortal:Q5RKM6 STRING:Q5RKM6
GeneID:493608 KEGG:dre:493608 InParanoid:Q5RKM6 NextBio:20865418
ArrayExpress:Q5RKM6 Uniprot:Q5RKM6
Length = 590
Score = 190 (71.9 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 88/373 (23%), Positives = 156/373 (41%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
G+ P I G + +L T++ + D +K L+ + + E C
Sbjct: 230 GIVLSMPPIINGNHSKISLNTKNVFIECTATDLTKAKITLDMIVTMFSEYCEQPFTVEEA 289
Query: 398 XXXX-XXNIPVRKEIKVRSER-----VIKILGIKLTNQEISNIFIRLKFHFI---QKNNI 448
+ V E+ R+E + K +GI + + I+ + R+ + I
Sbjct: 290 EVVYPDGRMCVYPELAYRTETLSGEFINKKVGINESAESIAQLLTRMCLRSEVSGEDGQI 349
Query: 449 FLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRHQ 506
+ IPP R D+ YGF NI S P TV+ P+ + + L R
Sbjct: 350 QVEIPPT-RSDVIHACDIMEDAAIAYGFNNIVRSTPRTYTVANQLPVNKLTELL---RQD 405
Query: 507 LAFADYQEVINYSFI--EDSLEKDFSQNINNY-PIELLNPISKKFNTMRSTLIGSLVNNI 563
LA A + E + ++ ED +K +N+ + + NP + +F R+ L+ L+ +
Sbjct: 406 LAAAGFTEALTFALCSQEDIADK-LRKNMAEIGAVHISNPKTAEFQVARTCLLPGLLKTV 464
Query: 564 CYNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYG--PLLEPQWGEE 621
N K L ++LFEI++V L D+ KD G + +++ I Y P E G
Sbjct: 465 AANRKMPLP-LKLFEISDVVLKDE-TKDV-----GARNNRRLCAIYYNKSPGFEVIHGLL 517
Query: 622 NRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQK 681
+R + D+K ++ + + +S P R A IF K+IG +G +HP + +
Sbjct: 518 DRVMQLLDVKPGRDHGY-----HIQAAEDSTFFPGRCAEIFSSGKSIGHLGVLHPDVISR 572
Query: 682 YDLPLAPIFFEVD 694
++L + E+D
Sbjct: 573 FELTMPCSAIEID 585
Score = 58 (25.5 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++S+ IING + ++LNTK++++
Sbjct: 232 VLSMPPIINGNHSKISLNTKNVFI 255
Score = 50 (22.7 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 25/113 (22%), Positives = 47/113 (41%)
Query: 101 INKKKSFIIN-IEKKYKIKSYGLLCSEYDLKINN--KNKYLF--ELPEDAPIGKNFYDYY 155
++ K+ + + + Y + + LC E+ L+++ K + E +D G + Y
Sbjct: 4 VSVKRDLLFEALGQTYTDEEFDELCFEFGLELDEITSEKDIISREQGDDKAEGASDVVLY 63
Query: 156 KFNNLKFVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILP 208
K I + NR D L L G+ R + + + K+ P YK + P
Sbjct: 64 K-------IDVPANRYDLLCLEGLVRGLQVFKD--------KMEAPRYKRVSP 101
>WB|WBGene00001498 [details] [associations]
symbol:fars-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 GO:GO:0005524 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0002119 GO:GO:0000287 GO:GO:0000003
GO:GO:0003723 eggNOG:COG0072 EMBL:Z50044 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 GeneTree:ENSGT00530000063489
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 Gene3D:3.50.40.10 InterPro:IPR020825
SUPFAM:SSF56037 PIR:T21245 RefSeq:NP_495785.1
ProteinModelPortal:Q19713 SMR:Q19713 IntAct:Q19713 STRING:Q19713
World-2DPAGE:0011:Q19713 PaxDb:Q19713 EnsemblMetazoa:F22B5.9.1
EnsemblMetazoa:F22B5.9.2 GeneID:174351 KEGG:cel:CELE_F22B5.9
UCSC:F22B5.9 CTD:174351 WormBase:F22B5.9 InParanoid:Q19713
NextBio:883668 Uniprot:Q19713
Length = 591
Score = 164 (62.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 81/365 (22%), Positives = 150/365 (41%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G+ + L T++ + D K L+ + L + C
Sbjct: 229 GVVCSMPPIINGEHSKITLNTKNVFIEATATDKQKAFVVLDTIVTLFSQYCAKPFTIEQV 288
Query: 398 XXXXXXN-----IPVR--KEIKVRSERVIKILGIKLTNQEISNIF--IRLKFHFIQKNNI 448
P+ +E+ V + + +GI L ++E++ + + LK K +
Sbjct: 289 EVVYEETGVKELYPLLSYREMTVTTPEINTKIGINLKDEEMATLLNKMSLKAEVAAKETL 348
Query: 449 FLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLPI--TVSKISPIKEGYQSLFSIRHQ 506
+V+PP R D+ +G+ N+ LP TV+ PI + +L R +
Sbjct: 349 KIVVPPT-RHDILHACDIAEDVGVAFGYNNLITKLPESNTVAVAFPINKLCDNL---RIE 404
Query: 507 LAFADYQEVINYSFIE-DSLEKDFSQ-NINNYPIELLNPISKKFNTMRSTLIGSLVNNIC 564
+A A + E +N++ D + Q + ++ + + NP + +F R++L+ L+ +
Sbjct: 405 IAAAGWTEALNFALCSRDDISSKLRQPDALSHAVHIGNPKTLEFQVARTSLLPGLLKTLS 464
Query: 565 YNLKRKLERIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYGPL--LEPQWGEEN 622
N L ++LFE L D +KDS V E +++A + Y E G +
Sbjct: 465 SNRDMPLP-LKLFE-----LQDVIVKDSNTDVGARNE-RRLAAVYYNRAAGFEIIQGFLD 517
Query: 623 RNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSA-LIFKKTKNIGFIGEIHPILQQK 681
R + ++ + + I+ + NS P R A +I K +G IG +HP +
Sbjct: 518 RIMRMLNVNPARDGTGYYIEAD----ENSTYFPGRCAKIIGPKGVVLGHIGALHPEVITS 573
Query: 682 YDLPL 686
+ L L
Sbjct: 574 FGLTL 578
Score = 61 (26.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 110 NIEKKYKIKSYGLLCSEYDLKINN--KNKYLFELPEDAPIGKNFYDYYKFNNLKFVIKLT 167
+ ++ Y K + LC EY L+++ K E + + D + I +
Sbjct: 14 HFKRVYSEKEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQEVYK-----IDIP 68
Query: 168 PNRGDCLSLLGIAREISI 185
NR D LS+ G+AR I I
Sbjct: 69 ANRYDLLSVEGLARAIRI 86
Score = 59 (25.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
+ S+ IING + +TLNTK++++
Sbjct: 231 VCSMPPIINGEHSKITLNTKNVFI 254
Score = 43 (20.2 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 243 EDSGQKLVSVLHDITNYVMLELGIPINIFDLSKISG 278
++ G + S L+D Y ++ IP N +DL + G
Sbjct: 47 KEQGTRAASDLNDQEVY---KIDIPANRYDLLSVEG 79
>FB|FBgn0039175 [details] [associations]
symbol:CG5706 species:7227 "Drosophila melanogaster"
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=ISS]
[GO:0009328 "phenylalanine-tRNA ligase complex" evidence=ISS]
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 KO:K01890 OMA:FFPNRPD
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 EMBL:AY052086 RefSeq:NP_651237.1 UniGene:Dm.1314
ProteinModelPortal:Q9VCA5 SMR:Q9VCA5 STRING:Q9VCA5 PaxDb:Q9VCA5
PRIDE:Q9VCA5 EnsemblMetazoa:FBtr0084637 GeneID:42888
KEGG:dme:Dmel_CG5706 UCSC:CG5706-RA FlyBase:FBgn0039175
InParanoid:Q9VCA5 OrthoDB:EOG45QFVD PhylomeDB:Q9VCA5
GenomeRNAi:42888 NextBio:831099 Bgee:Q9VCA5 GermOnline:CG5706
Uniprot:Q9VCA5
Length = 589
Score = 163 (62.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 80/367 (21%), Positives = 159/367 (43%)
Query: 344 PNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXXXXXXXX 403
P I G + L T++ + D +K L+ + L E C
Sbjct: 234 PPIINGDHSKITLKTKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPD 293
Query: 404 NIPVR-KEIKVRSERV-IK----ILGIKLTNQEISNIFIRLKFHF-IQKNNIFLVIPPAH 456
+ E++VR ER+ +K +GI ++++++ R+ + +++ + IPP
Sbjct: 294 GSVISYPELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPT- 352
Query: 457 RFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRHQLAFADYQE 514
R D+ YG+ NI SLP + ++K P+ + + L R Q+A A + E
Sbjct: 353 RHDVIHACDIYEDVAIAYGYNNIKKSLPAFMQIAKQFPLNKLTEQL---REQVAQAGFTE 409
Query: 515 VINYSFIE-DSLEKDFSQNINNYP-IELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLE 572
+ ++ D + + ++NI+ P + + NP + +F +R+TL+ L+ + N K L
Sbjct: 410 ALTFTLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP 469
Query: 573 RIRLFEIANVYLHDKFIKDSPFTVSGYKELKKIAVIAYGPL--LEPQWGEENRNIDYFDL 630
++LFEI++V + D+ T G + +++ + E G +R + +
Sbjct: 470 -LKLFEISDVVVADES------TEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSV 522
Query: 631 KNDLENLFFPIKLNFLKINNSILH-PNRSALIFKKTKNIGFIGEIHPILQQKYDL--PLA 687
+ K +L+ + P R A + IG IG +HP + Q ++L P +
Sbjct: 523 PWKSAS---GTKGYYLQATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCS 579
Query: 688 PIFFEVD 694
+ F ++
Sbjct: 580 AVEFTIE 586
Score = 58 (25.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++SL IING + +TL TK++++
Sbjct: 230 VLSLPPIINGDHSKITLKTKNVFI 253
>DICTYBASE|DDB_G0277303 [details] [associations]
symbol:phesB "phenylalanine-tRNA ligase, beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009328 "phenylalanine-tRNA
ligase complex" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 dictyBase:DDB_G0277303 GO:GO:0005524 GO:GO:0000287
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000019
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GO:GO:0009328 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 RefSeq:XP_642684.2 ProteinModelPortal:Q550D2
STRING:Q550D2 EnsemblProtists:DDB0231327 GeneID:8620873
KEGG:ddi:DDB_G0277303 ProtClustDB:CLSZ2429035 Uniprot:Q550D2
Length = 617
Score = 144 (55.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 79/396 (19%), Positives = 168/396 (42%)
Query: 314 IISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKT 373
+ SL IING + + L+TK++++ V N R K+N +V + ++ K
Sbjct: 233 VCSLPPIINGEHSKIKLSTKNVFIEVT---AND-RTKAN---IVLNTMLTMFS--EYCKQ 283
Query: 374 IKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISN 433
+E+V +I+ G K+I + + + K GI +T ++
Sbjct: 284 PFTMEQVE--VIDADGKSTGLYPQIQ--------EKQINAQVDYINKSAGINITPNDMVT 333
Query: 434 IFIRLKFH--FIQKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLPI--TVSK 489
+ R+ +V P R D+ YG++N+ +P T+ +
Sbjct: 334 LLKRMSLQSKLSDDEKSIIVDVPVTRSDIMHACDIMEDVAIGYGYDNLKKEIPNCNTIGR 393
Query: 490 ISPIKEGYQSLFSIRHQLAFADYQEVINYSFIE--DSLEKDFSQNINNYPIELLNPISKK 547
+ PI + + L +++A A + E++ + + D+ ++ + +++ N +S++
Sbjct: 394 VQPINKLSELL---ANEIALAGFTEIMTFVLCQNRDNFTA-LNKADDGSSVKISNAVSEE 449
Query: 548 FNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVY----LHDKFIKD---SPFTVSGYK 600
F +R+ L+ +L+ ++ N L +++FEI++V L +K + D + V Y
Sbjct: 450 FTEVRTNLVSTLLKSVSANKAAPLP-LKMFEISDVSIKGSLGNKDLSDPNSNNSDVGAYN 508
Query: 601 ELKKIAVIA-YGPLLEPQWGEENRNIDYFDLKNDLENLFFPIKLNFLKINNSILH-PNRS 658
+ A+ +E G +R + D+K D K +L+++N L P
Sbjct: 509 KRMLGAIYCNQSAKIEVIHGLLDRIMLVLDIKLDATRS--SNKGYYLELSNDKLFLPGTG 566
Query: 659 ALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVD 694
+ K +G +G +HP++ + Y E++
Sbjct: 567 INVIVNGKRVGHMGIVHPLVLKNYSCSFPCTILELE 602
Score = 56 (24.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 162 FVIKLTPNRGDCLSLLGIAREISILSNTPLKLLNTKITLPNYKEILPVKIS 212
+ I ++ NR D L L GIAR +++ N K ++P Y +I+P K S
Sbjct: 65 YKIDVSANRYDLLCLEGIARALNVY--------NHKASIPKY-QIVPPKNS 106
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 203 YKEILPVKISAIDL-CGRFSGRIIRGINPKALTPKWMKIRLEDSGQKL 249
YK + V + DL C R + N KA PK+ + ++S +KL
Sbjct: 65 YK--IDVSANRYDLLCLEGIARALNVYNHKASIPKYQIVPPKNSHEKL 110
>TAIR|locus:2030290 [details] [associations]
symbol:AT1G72550 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 EMBL:AC010926 eggNOG:COG0072 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 EMBL:AY062707 EMBL:AY128795
IPI:IPI00537750 PIR:H96749 RefSeq:NP_177399.1 UniGene:At.27258
ProteinModelPortal:Q9SGE9 SMR:Q9SGE9 STRING:Q9SGE9 PaxDb:Q9SGE9
PRIDE:Q9SGE9 EnsemblPlants:AT1G72550.1 GeneID:843587
KEGG:ath:AT1G72550 GeneFarm:2620 TAIR:At1g72550
HOGENOM:HOG000105095 InParanoid:Q9SGE9 KO:K01890 OMA:FFPNRPD
PhylomeDB:Q9SGE9 ProtClustDB:PLN02265 Genevestigator:Q9SGE9
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 Uniprot:Q9SGE9
Length = 598
Score = 140 (54.3 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 68/290 (23%), Positives = 133/290 (45%)
Query: 422 LGIKLTNQEISNIFIRLKFHFIQKNN------IFLVIPPAHRFDLXXXXXXXXXXXRIYG 475
+G+ L ++++++ R++ Q + I + +PP+ R D+ YG
Sbjct: 319 IGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPS-RSDVLHPCDVMEDVAIAYG 377
Query: 476 FENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFS----Q 531
F NIP P ++ ++ + E L +R ++A Y EV+ + S +++F+ +
Sbjct: 378 FNNIPTRKPASIKPLT-LNE-LTDL--LRIEIAMCVYTEVVTWLLC--SHKENFAMLNRE 431
Query: 532 NINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKD 591
++N+ I + NP S F MR L+ L+ + +N K + I++FEI++V + D+ KD
Sbjct: 432 DVNSAVI-VGNPRSADFEAMRRALMPGLLKTVGHNNKYP-KPIKIFEISDVVMLDES-KD 488
Query: 592 SPFTVSGYKELKKIAVIAYGPL--LEPQWGEENRNIDYFDLKN-DLENLFFPIKLN---F 645
G + +A + G E G +R ++ + + PI +
Sbjct: 489 V-----GASNRRHLAALYCGATSGFELIHGLVDRIMEVMAIPFLTIHENNVPINEKDGYY 543
Query: 646 LKINNSI-LHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVD 694
+K++ P R A I + K+IG G +HP + +D+P + E+D
Sbjct: 544 VKLSQEPEFLPGRQASIIVRGKHIGNFGIVHPEVLNNFDIPDPCSYLELD 593
Score = 60 (26.2 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 314 IISLSGIINGFDASVTLNTKDIYL 337
++SL IING +++TL TK++++
Sbjct: 231 VLSLPPIINGAHSAITLQTKNVFI 254
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 1 MQIPENWLRTIINPKLSSNDLANLLTMSGLETEKIETN 38
M++P +++ I L + +LLT L+ E+ +++
Sbjct: 308 MEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSS 345
Score = 41 (19.5 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 162 FVIKLTPNRGDCLSLLGIAREISI 185
+ I++ NR D L L G+A+ + +
Sbjct: 63 YKIEIPANRPDLLCLEGLAQSLRV 86
>ASPGD|ASPL0000011475 [details] [associations]
symbol:AN4086 species:162425 "Emericella nidulans"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0009328 "phenylalanine-tRNA ligase
complex" evidence=IEA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 GO:GO:0003723 EMBL:BN001302
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 HOGENOM:HOG000105095
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 EnsemblFungi:CADANIAT00004595
Uniprot:C8V5C4
Length = 600
Score = 131 (51.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 70/299 (23%), Positives = 134/299 (44%)
Query: 423 GIKLTNQEISNIFIRLKFHFIQKNN----IFLVIPPAHRFDLXXXXXXXXXXXRIYGFEN 478
G++L+ +EI + ++ + + I + IPP R D+ YGF N
Sbjct: 314 GLQLSAEEICRLLTKMAYEATPSSTSPDLIDVHIPPT-RADILHQADIMEDVAIAYGFNN 372
Query: 479 IPISLPI---TVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFS----Q 531
+P S P TV++ PI + + IR + A A + EV+ I S +++F+ +
Sbjct: 373 LPRSFPSKSGTVAQPLPINK-LSDI--IRTEAAMAGWSEVL--PLILCSHDENFAWLNRK 427
Query: 532 NINNYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHD----- 586
+ N ++L NP +++F +R++L+ L+ I N + +++FE+++V D
Sbjct: 428 DDGNTAVKLANPKTQEFQVVRTSLLPGLLKTIRENKSHSVP-MKIFEVSDVAFKDLSMER 486
Query: 587 KFIKDSPFTVSGYKELKKIAVIAYGPL------LEPQW--GEEN-RNIDYFDLKNDLENL 637
K + F + Y + V+ +G L L+ + GEE N D + +E L
Sbjct: 487 KSRNERHFAAAWYSKTSGFEVV-HGLLDRIMSMLKSAFIIGEEGLENAAVKDSQYWIEEL 545
Query: 638 FFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQKYDL--PLAPIFFEVD 694
P + +++ +H I K IG G +HP + + Y L P++ + ++
Sbjct: 546 DDP---TYFHGHSASIHVR----IAGKDHTIGTFGILHPTVLENYGLKYPVSTLEINIE 597
Score = 62 (26.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 314 IISLSGIINGFDASVTLNTKDIYLGV 339
+ SL IING + +TLNTK++++ +
Sbjct: 224 VCSLPPIINGEHSKITLNTKNVFIEI 249
>POMBASE|SPAC23A1.12c [details] [associations]
symbol:frs1 "phenylalanine-tRNA ligase beta subunit
Frs1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=ISS] [GO:0009328 "phenylalanine-tRNA
ligase complex" evidence=IC] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 PomBase:SPAC23A1.12c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0000287 GO:GO:0003723 GO:GO:0002181 eggNOG:COG0072
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 GO:GO:0009328
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 PIR:T38232 RefSeq:NP_594442.1
ProteinModelPortal:O42849 STRING:O42849 PRIDE:O42849
EnsemblFungi:SPAC23A1.12c.1 GeneID:2541974 KEGG:spo:SPAC23A1.12c
OrthoDB:EOG46HKJZ NextBio:20803056 Uniprot:O42849
Length = 589
Score = 118 (46.6 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 61/289 (21%), Positives = 128/289 (44%)
Query: 423 GIKLTNQEISNIFIRLKFHFIQKNN---IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENI 479
G+ L EI ++ R+ N LV P R D+ YG++N+
Sbjct: 307 GLSLPEDEICHLLTRMMLTAKPNPNDSKTLLVYVPPLRADILHQCDIMEDLGIAYGYDNL 366
Query: 480 PISLPI-TVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFS---QNINN 535
+ P +V+ P E + IR+++A+A + EV+ FI S +++++ + ++
Sbjct: 367 KHTYPAHSVTFGKPF-EVNRLADIIRNEVAYAGWSEVM--PFILCSHDENYAWLRKTDDS 423
Query: 536 YPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANV----YLHDKFIKD 591
++L NP + +F +RS+L+ ++ + N L I++FE+++V Y ++ ++
Sbjct: 424 KAVQLANPKTLEFQVVRSSLLPGILKTVRENKNHALP-IKIFEVSDVAFCDYSRERMTRN 482
Query: 592 SPFTVSGYKELKKIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENLFFPIKLNFLKINNS 651
+ + L +G L + I + K D + + + I+ ++S
Sbjct: 483 ERHLCAIFAGLNSGFEQIHGLLDRVMLMLNTKRI--MNPK-DSDAVGYWIEAE----DDS 535
Query: 652 ILHPNRSALIFKKTK------NIGFIGEIHPILQQKYDLPLAPIFFEVD 694
P R A ++ + +G G +HP++ +K++L A E+D
Sbjct: 536 TFFPGRCAAVYYRKDFGTAGIRVGVFGVLHPLVLEKFELTSAASAVEID 584
Score = 62 (26.9 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 164 IKLTPNRGDCLSLLGIAREISILSN---TP-LKLL--NTKITL-PNYKEILPVKISAI 214
I + NR D L L GIA+ +++ + TP KLL T +T+ P EI P +AI
Sbjct: 55 IDIPANRYDMLCLEGIAQALNVFNRRMATPQYKLLPSTTSLTISPETSEIRPYAAAAI 112
Score = 49 (22.3 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 313 KIISLSGIINGFDASVTLNTKDIYLGV 339
++ SL IIN + ++++T+DI++ V
Sbjct: 216 RVCSLPPIINSEFSKISVDTRDIFIDV 242
>UNIPROTKB|Q97NV1 [details] [associations]
symbol:SP_1910 "Putative uncharacterized protein"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002547 Pfam:PF01588
PROSITE:PS50886 EMBL:AE005672 GenomeReviews:AE005672_GR
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
KO:K06878 HOGENOM:HOG000023580 OMA:PNAPQEK PIR:B95223
RefSeq:NP_346339.1 ProteinModelPortal:Q97NV1
EnsemblBacteria:EBSTRT00000026316 GeneID:930140 KEGG:spn:SP_1910
PATRIC:19708339 ProtClustDB:CLSK876741 Uniprot:Q97NV1
Length = 208
Score = 129 (50.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 56 HPDIDNFNICKVDTYKN-ILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKK 114
HPD D+ NIC+V + + IV PN RVGLK A+ G+ + K + I E +
Sbjct: 107 HPDSDHLNICQVAVASDKTVQIVAGAPNARVGLKTIVALPGAMM----PKGNLIFPGELR 162
Query: 115 YKIKSYGLLCSEYDLKINN--KNKYLFELPEDAPIGKNF 151
+ KS+G++CS +L + N + + + EL ED +G F
Sbjct: 163 GE-KSFGMMCSPRELHLPNAPQKRGVLELSEDQVVGTPF 200
>GENEDB_PFALCIPARUM|PF11_0051 [details] [associations]
symbol:PF11_0051 "phenylalanine --tRNA ligase,
putative" species:5833 "Plasmodium falciparum" [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 EMBL:AE014186 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GO:GO:0009328 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 ProtClustDB:CLSZ2429035 RefSeq:XP_001347727.1
ProteinModelPortal:Q8IIW2 PRIDE:Q8IIW2
EnsemblProtists:PF11_0051:mRNA GeneID:810604 KEGG:pfa:PF11_0051
EuPathDB:PlasmoDB:PF3D7_1104000 Uniprot:Q8IIW2
Length = 623
Score = 129 (50.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 79/324 (24%), Positives = 137/324 (42%)
Query: 409 KEIKVRSERVIKILGIK-LTNQEISNIFIRLKFHF-IQKNNIFLVIPPAHRFDLXXXXXX 466
K + + V K+ GI +T E++N+ R+ I NN F V P +R D+
Sbjct: 306 KSLTCNIDYVRKLSGISHITVHEVNNLLKRMMLSCDIMDNNTFKVTIPFYRSDIMHCCDI 365
Query: 467 XXXXXRIYGFENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIE-DS- 524
YG+ NI P K S LF R+ L Y EV+ + + D
Sbjct: 366 IEDIAIAYGYGNIKYEPPQICKKHS--LNNCSELF--RNVLVECGYTEVMTNALLSRDEN 421
Query: 525 ------LEKDFSQ-NIN--NY-----PIELLNPISKKFNTMRSTLIGSLVNNICYNLKRK 570
K + NIN Y PI++ N + ++ +R++LI +L+ + N R+
Sbjct: 422 YNCMLRTHKSYDDPNINLDEYNPLAAPIQIKNSKTSEYEIIRTSLIVNLLKFVSANKHRE 481
Query: 571 LERIRLFEIANV----Y-------LHDKFIK---DSPFTVSGYKELKKI--AVIAYGPLL 614
L +R FEI +V Y ++ K++ FT +G +EL + A++ L
Sbjct: 482 LP-LRFFEIGDVSYATYNQTDTNAVNKKYLSIIFSDKFT-AGLEELHGVLEAILKEYQLF 539
Query: 615 EPQWGEENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEI 674
EE + + +++D+ P K + +N I+ ++F G +G I
Sbjct: 540 SDYKIEEKKK-ENISIRSDMYYKLIP-KEDPSFLNERIV----DIVLFPHNLKFGVLGII 593
Query: 675 HPILQQKY--DLPLAPIFFEVDAL 696
HP + + + D+P++ I V+ L
Sbjct: 594 HPKVLENFSLDIPVSAIEINVETL 617
Score = 52 (23.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 313 KIISLSGIINGFDASVTLNTKDIYL 337
+I+SL IIN ++LNTK++++
Sbjct: 218 QILSLPPIINCDHTKISLNTKNVFI 242
>UNIPROTKB|Q8IIW2 [details] [associations]
symbol:PF11_0051 "Phenylalanyl-tRNA synthetase beta chain,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 EMBL:AE014186 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GO:GO:0009328 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 ProtClustDB:CLSZ2429035 RefSeq:XP_001347727.1
ProteinModelPortal:Q8IIW2 PRIDE:Q8IIW2
EnsemblProtists:PF11_0051:mRNA GeneID:810604 KEGG:pfa:PF11_0051
EuPathDB:PlasmoDB:PF3D7_1104000 Uniprot:Q8IIW2
Length = 623
Score = 129 (50.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 79/324 (24%), Positives = 137/324 (42%)
Query: 409 KEIKVRSERVIKILGIK-LTNQEISNIFIRLKFHF-IQKNNIFLVIPPAHRFDLXXXXXX 466
K + + V K+ GI +T E++N+ R+ I NN F V P +R D+
Sbjct: 306 KSLTCNIDYVRKLSGISHITVHEVNNLLKRMMLSCDIMDNNTFKVTIPFYRSDIMHCCDI 365
Query: 467 XXXXXRIYGFENIPISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIE-DS- 524
YG+ NI P K S LF R+ L Y EV+ + + D
Sbjct: 366 IEDIAIAYGYGNIKYEPPQICKKHS--LNNCSELF--RNVLVECGYTEVMTNALLSRDEN 421
Query: 525 ------LEKDFSQ-NIN--NY-----PIELLNPISKKFNTMRSTLIGSLVNNICYNLKRK 570
K + NIN Y PI++ N + ++ +R++LI +L+ + N R+
Sbjct: 422 YNCMLRTHKSYDDPNINLDEYNPLAAPIQIKNSKTSEYEIIRTSLIVNLLKFVSANKHRE 481
Query: 571 LERIRLFEIANV----Y-------LHDKFIK---DSPFTVSGYKELKKI--AVIAYGPLL 614
L +R FEI +V Y ++ K++ FT +G +EL + A++ L
Sbjct: 482 LP-LRFFEIGDVSYATYNQTDTNAVNKKYLSIIFSDKFT-AGLEELHGVLEAILKEYQLF 539
Query: 615 EPQWGEENRNIDYFDLKNDLENLFFPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEI 674
EE + + +++D+ P K + +N I+ ++F G +G I
Sbjct: 540 SDYKIEEKKK-ENISIRSDMYYKLIP-KEDPSFLNERIV----DIVLFPHNLKFGVLGII 593
Query: 675 HPILQQKY--DLPLAPIFFEVDAL 696
HP + + + D+P++ I V+ L
Sbjct: 594 HPKVLENFSLDIPVSAIEINVETL 617
Score = 52 (23.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 313 KIISLSGIINGFDASVTLNTKDIYL 337
+I+SL IIN ++LNTK++++
Sbjct: 218 QILSLPPIINCDHTKISLNTKNVFI 242
>UNIPROTKB|Q71Z60 [details] [associations]
symbol:LMOf2365_1629 "tRNA-binding domain protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002547
Pfam:PF01588 PROSITE:PS50886 EMBL:AE017262
GenomeReviews:AE017262_GR Gene3D:2.40.50.140 InterPro:IPR012340
eggNOG:COG0073 GO:GO:0000049 SUPFAM:SSF50249 KO:K06878
RefSeq:YP_014227.1 ProteinModelPortal:Q71Z60 SMR:Q71Z60
STRING:Q71Z60 GeneID:2797825 KEGG:lmf:LMOf2365_1629 PATRIC:20324493
HOGENOM:HOG000023580 OMA:PNAPQEK ProtClustDB:CLSK809370
Uniprot:Q71Z60
Length = 205
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 56 HPDIDNFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKY 115
HP+ D N+C+++ +L IVC PNI G KV A IG+ + II
Sbjct: 109 HPNADKLNVCRINVGDEVLQIVCGAPNIDAGQKVVVAKIGAVM-----PSGLIIKPSNLR 163
Query: 116 KIKSYGLLCSEYDLKINNK--NKYLFELPEDAPIGKNF 151
S+G++C+ +L I + K + L E A +G+ F
Sbjct: 164 GEDSFGMVCAARELAIPDAPTEKGIMVLEESAVVGEAF 201
>UNIPROTKB|Q81JE1 [details] [associations]
symbol:BAS4587 "Putative tRNA binding domain protein"
species:1392 "Bacillus anthracis" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002547 Pfam:PF01588 PROSITE:PS50886
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
KO:K06878 HSSP:Q9V011 HOGENOM:HOG000023580 OMA:PNAPQEK
RefSeq:NP_847140.1 RefSeq:YP_021588.1 RefSeq:YP_030833.1
ProteinModelPortal:Q81JE1 SMR:Q81JE1 DNASU:1084146
EnsemblBacteria:EBBACT00000009191 EnsemblBacteria:EBBACT00000013501
EnsemblBacteria:EBBACT00000024076 GeneID:1084146 GeneID:2819497
GeneID:2850459 KEGG:ban:BA_4943 KEGG:bar:GBAA_4943 KEGG:bat:BAS4587
ProtClustDB:CLSK917465 BioCyc:BANT260799:GJAJ-4643-MONOMER
BioCyc:BANT261594:GJ7F-4801-MONOMER Uniprot:Q81JE1
Length = 204
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 56 HPDIDNFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKY 115
HP+ D NICKV+ L IVC PN+ G KV A IG+ + +I +
Sbjct: 110 HPNADKLNICKVEIGTETLQIVCGAPNVDAGQKVVVAKIGAVM-----PSGMLIKPAELR 164
Query: 116 KIKSYGLLCSEYDLKINN--KNKYLFELPEDAPIGKNF 151
+ S G++CS +L++ + + K + L + +G+ F
Sbjct: 165 GVPSAGMICSARELELPDAPQEKGILVLEDSFEVGQEF 202
>TIGR_CMR|BA_4943 [details] [associations]
symbol:BA_4943 "tRNA binding domain protein, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002547 Pfam:PF01588 PROSITE:PS50886
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
KO:K06878 HSSP:Q9V011 HOGENOM:HOG000023580 OMA:PNAPQEK
RefSeq:NP_847140.1 RefSeq:YP_021588.1 RefSeq:YP_030833.1
ProteinModelPortal:Q81JE1 SMR:Q81JE1 DNASU:1084146
EnsemblBacteria:EBBACT00000009191 EnsemblBacteria:EBBACT00000013501
EnsemblBacteria:EBBACT00000024076 GeneID:1084146 GeneID:2819497
GeneID:2850459 KEGG:ban:BA_4943 KEGG:bar:GBAA_4943 KEGG:bat:BAS4587
ProtClustDB:CLSK917465 BioCyc:BANT260799:GJAJ-4643-MONOMER
BioCyc:BANT261594:GJ7F-4801-MONOMER Uniprot:Q81JE1
Length = 204
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 56 HPDIDNFNICKVDTYKNILDIVCNIPNIRVGLKVPCAIIGSSLLCINKKKSFIINIEKKY 115
HP+ D NICKV+ L IVC PN+ G KV A IG+ + +I +
Sbjct: 110 HPNADKLNICKVEIGTETLQIVCGAPNVDAGQKVVVAKIGAVM-----PSGMLIKPAELR 164
Query: 116 KIKSYGLLCSEYDLKINN--KNKYLFELPEDAPIGKNF 151
+ S G++CS +L++ + + K + L + +G+ F
Sbjct: 165 GVPSAGMICSARELELPDAPQEKGILVLEDSFEVGQEF 202
>UNIPROTKB|F1SR70 [details] [associations]
symbol:LOC100524650 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GeneTree:ENSGT00530000063489 Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 InterPro:IPR020825 SUPFAM:SSF56037 EMBL:CU861974
Ensembl:ENSSSCT00000017668 OMA:CKIDISV Uniprot:F1SR70
Length = 356
Score = 126 (49.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 53/226 (23%), Positives = 96/226 (42%)
Query: 338 GVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKTIKCLERVTNLIIEICGTXXXXXXX 397
GV P I G + + T + + G DF+K L+ + + E C
Sbjct: 130 GVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAA 189
Query: 398 XXX-------XXXNIPVRKEIKVRSERVIKILGIKLTNQEISNIFIR--LKFHFI-QKNN 447
+ RKEI VR++ + K +GI+ T + ++ + R LK I +
Sbjct: 190 EVVFPNGKLHTFPELAYRKEI-VRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQ 248
Query: 448 IFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLP--ITVSKISPIKEGYQSLFSIRH 505
I + +PP R D+ YG+ NI ++LP T++ P+ + + L +RH
Sbjct: 249 IEIEVPPT-RADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNK-FTEL--LRH 304
Query: 506 QLAFADYQEVINYSFI--EDSLEKDFSQNIN-NYPIELLNPISKKF 548
+A A + E + ++ ED +K +I+ + + NP + +F
Sbjct: 305 DMAAAGFTEALTFALCSQEDIADK-LGLDISATKAVHISNPKTAEF 349
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 104 KKSFIINIEKKYKIKSYGLLCSEYDL-KINNKNKYLFELPEDAPIGKNFYD 153
KK I + K K Y C ++ K +N+ K+ + E+ P+ YD
Sbjct: 78 KKPADIKFKPLNKSKEY-TACELMNIYKTDNQLKHYLHIIENKPLYPVIYD 127
>SGD|S000004050 [details] [associations]
symbol:FRS1 "Beta subunit of cytoplasmic phenylalanyl-tRNA
synthetase" species:4932 "Saccharomyces cerevisiae" [GO:0006412
"translation" evidence=IEA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=IEA;IDA] [GO:0004826 "phenylalanine-tRNA
ligase activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0009328 "phenylalanine-tRNA ligase complex"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 SGD:S000004050 GO:GO:0005524
GO:GO:0000287 EMBL:BK006945 GO:GO:0003723 eggNOG:COG0072
SUPFAM:SSF46955 EMBL:X94607 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 GO:GO:0009328 HOGENOM:HOG000105095
KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
OrthoDB:EOG46HKJZ EMBL:J03964 EMBL:Z73232 EMBL:AY692778 PIR:S61634
RefSeq:NP_013161.1 ProteinModelPortal:P15624 SMR:P15624
DIP:DIP-6746N IntAct:P15624 MINT:MINT-616734 STRING:P15624
PaxDb:P15624 PeptideAtlas:P15624 EnsemblFungi:YLR060W GeneID:850749
KEGG:sce:YLR060W NextBio:966879 Genevestigator:P15624
GermOnline:YLR060W Uniprot:P15624
Length = 595
Score = 126 (49.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 64/297 (21%), Positives = 125/297 (42%)
Query: 422 LGIKLTNQEISNIFIRLKFHFIQKN---NIFLVIPPAHRFDLXXXXXXXXXXXRIYGFEN 478
LG+ + EI++ ++ H +Q +I V P R D+ YGF N
Sbjct: 308 LGLDQSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNN 367
Query: 479 IP----ISLPITVSKISPIKEGYQSLFSIRHQLAFADYQEVINYSFIE-DSLEKDFSQNI 533
+P +S ++K PI + +F + A + EV+ + D K Q+
Sbjct: 368 LPKGEKLSNANFIAKPLPINK-VSDIFRVASSQA--TWVEVLPLTLCSHDENFKFLRQSD 424
Query: 534 N-NYPIELLNPISKKFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDS 592
N + ++L NP + ++ +R+TL+ ++ + N K L I++FE +V D ++
Sbjct: 425 NGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKDDKLERK 483
Query: 593 PFTVSGYKEL---KK--IAVIA--YGPLLEP---QW----GEENRNIDYFDLKNDLENLF 638
+ + + K +I G +++ +W G Y+ ++D +
Sbjct: 484 AYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIEEDDSVKTY 543
Query: 639 FPIKLNFLKINNSILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDA 695
FP + ++ ++ + K IG +G +HP + +D+P A F EV+A
Sbjct: 544 FPGR------GAKVMFRSKEGA---EPKQIGHLGVLHPEVMMNFDVPFAASFVEVNA 591
Score = 44 (20.5 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 313 KIISLSGIINGFDASVTLNTKDIYLGV 339
++ SL +IN + +++NT++I + +
Sbjct: 218 RVCSLPPLINSEHSKISVNTRNILIDI 244
>CGD|CAL0002521 [details] [associations]
symbol:FRS1 species:5476 "Candida albicans" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA;ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 CGD:CAL0002521 GO:GO:0005524
GO:GO:0000287 GO:GO:0003723 GO:GO:0035690 EMBL:AACQ01000044
EMBL:AACQ01000043 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GO:GO:0009328 KO:K01890 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
RefSeq:XP_718239.1 RefSeq:XP_718335.1 ProteinModelPortal:Q5A993
STRING:Q5A993 GeneID:3640034 GeneID:3640121 KEGG:cal:CaO19.10105
KEGG:cal:CaO19.2573 Uniprot:Q5A993
Length = 592
Score = 116 (45.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 88/405 (21%), Positives = 169/405 (41%)
Query: 314 IISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKT 373
+ SL IIN + +TLNTK++++ V + R K+ ++ + F R + K
Sbjct: 218 VASLPPIINSDHSKITLNTKNVWIDVT----GTDRTKTEI--VINQLVAMFSR---YCKE 268
Query: 374 IKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISN 433
+E + +I E NI R K + +G+ + +EIS
Sbjct: 269 PFEIEPI-QIISE--------HNNETRVCPNITPRTA-KAEISYINSCVGLDYSGEEISK 318
Query: 434 IFIRLKFHFI---QKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLPITVSKI 490
+ ++ ++ +I V P R D+ YG++N+ + P S +
Sbjct: 319 LLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKTKPKAESLV 378
Query: 491 SPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFS----QNINNYPIELLNPISK 546
+ + +R + A Y EV+ + S +++F+ ++ ++L NP +
Sbjct: 379 AAPLPVNKVADILRLASSQAGYLEVMPLTL--SSHDENFAWLKQKDDGTKAVKLENPKTI 436
Query: 547 KFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFT----------- 595
++ +R+TL+ ++ + N K L I++FE ++ L + ++ F
Sbjct: 437 EYQVVRTTLLPGILKTVKENRKHSLP-IKVFECGDIVLKNPELERGAFNQRNWAALYVGK 495
Query: 596 VSGYKELK----KIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENL-FFPIKLNFLKINN 650
SG++ ++ KI P LE ++ R Y+ ++ D EN FFP + + N
Sbjct: 496 TSGFEMVQGLLGKIMQTMRTPWLENPSKDQRRG--YW-IEEDKENTTFFPGRGAKIYFRN 552
Query: 651 SILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDA 695
+ N A K IG IG +HP + +D+P A E++A
Sbjct: 553 A---DNAEA------KAIGSIGVLHPEVMNNFDIPYAASSVEINA 588
Score = 53 (23.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 164 IKLTPNRGDCLSLLGIAREIS-ILSNTPLKLLNTKITLPNYKEI-LPVKISAIDLCGRFS 221
I++ NR D L + GIA+ ++ L NT N K++ P+ EI L +K S + +
Sbjct: 54 IEVPANRYDMLCIEGIAQALNEFLGNTSAP--NYKLS-PSKPEISLTIKESTYPIRQYAA 110
Query: 222 GRIIRGI 228
I+R +
Sbjct: 111 SAILRNV 117
>UNIPROTKB|Q5A993 [details] [associations]
symbol:FRS1 "Putative uncharacterized protein FRS1"
species:237561 "Candida albicans SC5314" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 CGD:CAL0002521 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 GO:GO:0035690 EMBL:AACQ01000044 EMBL:AACQ01000043
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 GO:GO:0009328 KO:K01890
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 RefSeq:XP_718239.1
RefSeq:XP_718335.1 ProteinModelPortal:Q5A993 STRING:Q5A993
GeneID:3640034 GeneID:3640121 KEGG:cal:CaO19.10105
KEGG:cal:CaO19.2573 Uniprot:Q5A993
Length = 592
Score = 116 (45.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 88/405 (21%), Positives = 169/405 (41%)
Query: 314 IISLSGIINGFDASVTLNTKDIYLGVAFWWPNSIRGKSNHYNLVTESSYRFERGIDFSKT 373
+ SL IIN + +TLNTK++++ V + R K+ ++ + F R + K
Sbjct: 218 VASLPPIINSDHSKITLNTKNVWIDVT----GTDRTKTEI--VINQLVAMFSR---YCKE 268
Query: 374 IKCLERVTNLIIEICGTXXXXXXXXXXXXXNIPVRKEIKVRSERVIKILGIKLTNQEISN 433
+E + +I E NI R K + +G+ + +EIS
Sbjct: 269 PFEIEPI-QIISE--------HNNETRVCPNITPRTA-KAEISYINSCVGLDYSGEEISK 318
Query: 434 IFIRLKFHFI---QKNNIFLVIPPAHRFDLXXXXXXXXXXXRIYGFENIPISLPITVSKI 490
+ ++ ++ +I V P R D+ YG++N+ + P S +
Sbjct: 319 LLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKTKPKAESLV 378
Query: 491 SPIKEGYQSLFSIRHQLAFADYQEVINYSFIEDSLEKDFS----QNINNYPIELLNPISK 546
+ + +R + A Y EV+ + S +++F+ ++ ++L NP +
Sbjct: 379 AAPLPVNKVADILRLASSQAGYLEVMPLTL--SSHDENFAWLKQKDDGTKAVKLENPKTI 436
Query: 547 KFNTMRSTLIGSLVNNICYNLKRKLERIRLFEIANVYLHDKFIKDSPFT----------- 595
++ +R+TL+ ++ + N K L I++FE ++ L + ++ F
Sbjct: 437 EYQVVRTTLLPGILKTVKENRKHSLP-IKVFECGDIVLKNPELERGAFNQRNWAALYVGK 495
Query: 596 VSGYKELK----KIAVIAYGPLLEPQWGEENRNIDYFDLKNDLENL-FFPIKLNFLKINN 650
SG++ ++ KI P LE ++ R Y+ ++ D EN FFP + + N
Sbjct: 496 TSGFEMVQGLLGKIMQTMRTPWLENPSKDQRRG--YW-IEEDKENTTFFPGRGAKIYFRN 552
Query: 651 SILHPNRSALIFKKTKNIGFIGEIHPILQQKYDLPLAPIFFEVDA 695
+ N A K IG IG +HP + +D+P A E++A
Sbjct: 553 A---DNAEA------KAIGSIGVLHPEVMNNFDIPYAASSVEINA 588
Score = 53 (23.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 164 IKLTPNRGDCLSLLGIAREIS-ILSNTPLKLLNTKITLPNYKEI-LPVKISAIDLCGRFS 221
I++ NR D L + GIA+ ++ L NT N K++ P+ EI L +K S + +
Sbjct: 54 IEVPANRYDMLCIEGIAQALNEFLGNTSAP--NYKLS-PSKPEISLTIKESTYPIRQYAA 110
Query: 222 GRIIRGI 228
I+R +
Sbjct: 111 SAILRNV 117
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.141 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 809 734 0.00087 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 620 (66 KB)
Total size of DFA: 360 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.92u 0.07s 59.99t Elapsed: 00:00:07
Total cpu time: 59.94u 0.08s 60.02t Elapsed: 00:00:07
Start: Thu Aug 15 13:22:59 2013 End: Thu Aug 15 13:23:06 2013