Query psy9575
Match_columns 786
No_of_seqs 601 out of 5041
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 23:10:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9575.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9575hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h88_A Succinate dehydrogenase 100.0 2.5E-99 9E-104 873.1 56.3 566 1-567 31-621 (621)
2 2bs2_A Quinol-fumarate reducta 100.0 3.9E-95 1.3E-99 843.9 51.4 547 1-569 18-599 (660)
3 2wdq_A Succinate dehydrogenase 100.0 1.1E-94 3.6E-99 835.4 54.3 564 1-567 20-588 (588)
4 1kf6_A Fumarate reductase flav 100.0 2.8E-91 9.6E-96 808.1 57.6 540 1-567 18-581 (602)
5 1chu_A Protein (L-aspartate ox 100.0 9E-86 3.1E-90 754.0 37.2 498 1-538 21-532 (540)
6 3gyx_A Adenylylsulfate reducta 100.0 5.3E-85 1.8E-89 758.1 39.8 514 1-551 35-657 (662)
7 1jnr_A Adenylylsulfate reducta 100.0 5.7E-73 1.9E-77 661.5 44.4 513 1-551 35-636 (643)
8 2e5v_A L-aspartate oxidase; ar 100.0 3.4E-72 1.2E-76 632.9 34.0 457 1-540 12-470 (472)
9 1y0p_A Fumarate reductase flav 100.0 1.9E-51 6.6E-56 475.9 34.3 368 1-403 139-569 (571)
10 1d4d_A Flavocytochrome C fumar 100.0 3.7E-51 1.3E-55 472.3 34.2 369 1-403 139-570 (572)
11 1qo8_A Flavocytochrome C3 fuma 100.0 9.9E-51 3.4E-55 469.2 36.7 368 1-403 134-564 (566)
12 4at0_A 3-ketosteroid-delta4-5a 100.0 5.4E-47 1.9E-51 432.6 30.7 377 1-401 54-509 (510)
13 3vr8_B Iron-sulfur subunit of 100.0 4.8E-47 1.6E-51 387.3 16.9 229 556-785 39-270 (282)
14 2h88_B Succinate dehydrogenase 100.0 4.4E-42 1.5E-46 352.4 16.2 228 555-785 14-246 (252)
15 2bs2_B Quinol-fumarate reducta 100.0 8.4E-41 2.9E-45 341.7 14.9 228 555-786 7-240 (241)
16 2wdq_B Succinate dehydrogenase 100.0 3.1E-40 1.1E-44 337.1 18.0 227 555-785 5-237 (238)
17 1kf6_B Fumarate reductase iron 100.0 1.2E-39 4.1E-44 333.8 15.9 227 555-785 8-235 (243)
18 2i0z_A NAD(FAD)-utilizing dehy 100.0 1.8E-29 6.3E-34 283.0 22.3 351 1-404 39-445 (447)
19 3kwl_A Uncharacterized protein 100.0 1.1E-29 3.7E-34 284.7 14.0 188 556-785 28-223 (514)
20 2gqf_A Hypothetical protein HI 99.9 6.7E-22 2.3E-26 217.6 17.4 333 1-400 17-400 (401)
21 3v76_A Flavoprotein; structura 99.8 5.7E-20 2E-24 202.8 12.4 172 1-217 40-211 (417)
22 3i9v_3 NADH-quinone oxidoreduc 99.7 5.5E-18 1.9E-22 200.9 -1.2 65 576-642 10-98 (783)
23 1rm6_C 4-hydroxybenzoyl-COA re 99.6 5.9E-16 2E-20 144.9 8.3 133 574-764 13-147 (161)
24 1t3q_A Quinoline 2-oxidoreduct 99.6 1.2E-15 4.2E-20 144.5 9.6 134 573-765 19-155 (168)
25 3c8y_A Iron hydrogenase 1; dit 99.6 2.8E-17 9.5E-22 187.5 -5.4 68 574-643 8-78 (574)
26 3cp8_A TRNA uridine 5-carboxym 99.5 2.8E-13 9.5E-18 154.3 13.6 168 1-217 34-213 (641)
27 3nlc_A Uncharacterized protein 99.3 6.5E-10 2.2E-14 125.8 25.2 59 124-188 220-278 (549)
28 1ffv_A CUTS, iron-sulfur prote 99.2 2.3E-11 7.9E-16 113.3 9.3 132 574-763 14-147 (163)
29 1n62_A Carbon monoxide dehydro 99.2 5.4E-11 1.9E-15 111.1 9.6 133 574-763 14-148 (166)
30 2zxi_A TRNA uridine 5-carboxym 99.2 1.4E-10 4.8E-15 131.6 14.0 87 124-217 123-218 (637)
31 3ces_A MNMG, tRNA uridine 5-ca 99.1 2E-09 6.9E-14 122.6 20.1 59 124-189 124-183 (651)
32 4b1b_A TRXR, thioredoxin reduc 98.7 4E-09 1.4E-13 119.6 4.5 54 129-188 145-198 (542)
33 3hrd_D Nicotinate dehydrogenas 98.7 7.6E-09 2.6E-13 95.6 4.7 67 574-645 14-82 (160)
34 3cf4_A Acetyl-COA decarboxylas 98.7 4.8E-09 1.7E-13 122.7 2.4 173 584-784 256-485 (807)
35 3dgz_A Thioredoxin reductase 2 98.6 6.3E-09 2.2E-13 117.5 2.6 141 1-187 19-159 (488)
36 3f8d_A Thioredoxin reductase ( 98.6 3.4E-08 1.1E-12 104.7 8.1 56 335-405 264-319 (323)
37 3lzw_A Ferredoxin--NADP reduct 98.6 7.1E-08 2.4E-12 102.7 9.0 58 123-187 66-123 (332)
38 3oz2_A Digeranylgeranylglycero 98.5 2.5E-06 8.4E-11 92.9 19.4 61 124-187 102-162 (397)
39 4fk1_A Putative thioredoxin re 98.5 3.2E-07 1.1E-11 96.5 11.8 51 337-404 251-301 (304)
40 3qfa_A Thioredoxin reductase 1 98.5 1.4E-08 4.8E-13 115.4 1.2 141 1-187 45-185 (519)
41 3dme_A Conserved exported prot 98.5 3.9E-07 1.3E-11 98.3 12.7 61 123-187 149-209 (369)
42 1y56_B Sarcosine oxidase; dehy 98.5 1.9E-07 6.5E-12 101.6 10.1 169 1-187 18-205 (382)
43 3urh_A Dihydrolipoyl dehydroge 98.5 5.6E-08 1.9E-12 109.8 5.6 46 337-400 317-362 (491)
44 3o0h_A Glutathione reductase; 98.5 5.2E-08 1.8E-12 109.8 4.6 128 1-187 39-166 (484)
45 1ojt_A Surface protein; redox- 98.5 9.1E-08 3.1E-12 107.7 6.5 45 338-400 304-348 (482)
46 3dgh_A TRXR-1, thioredoxin red 98.5 4.8E-08 1.6E-12 110.1 3.7 46 338-400 306-351 (483)
47 3ps9_A TRNA 5-methylaminomethy 98.5 9.1E-07 3.1E-11 103.9 14.7 62 122-190 415-476 (676)
48 3da1_A Glycerol-3-phosphate de 98.4 9E-07 3.1E-11 101.2 13.3 65 122-187 168-232 (561)
49 3lad_A Dihydrolipoamide dehydr 98.4 5.9E-08 2E-12 109.2 2.9 46 337-400 297-342 (476)
50 2gag_B Heterotetrameric sarcos 98.4 9.1E-07 3.1E-11 97.0 12.3 172 1-187 34-230 (405)
51 1rp0_A ARA6, thiazole biosynth 98.4 6.9E-07 2.4E-11 93.0 10.6 130 1-188 52-192 (284)
52 3jsk_A Cypbp37 protein; octame 98.4 6.8E-07 2.3E-11 94.3 9.8 131 1-188 92-252 (344)
53 3dk9_A Grase, GR, glutathione 98.4 1.2E-07 4.1E-12 106.7 3.8 47 337-401 310-356 (478)
54 2a8x_A Dihydrolipoyl dehydroge 98.4 1.6E-07 5.6E-12 105.1 4.5 55 126-188 93-147 (464)
55 2rgh_A Alpha-glycerophosphate 98.3 1.7E-06 5.8E-11 99.2 12.1 65 123-188 187-251 (571)
56 1ebd_A E3BD, dihydrolipoamide 98.3 2.8E-07 9.6E-12 102.9 5.4 54 126-188 93-146 (455)
57 1vlb_A Aldehyde oxidoreductase 98.3 5.1E-07 1.7E-11 107.8 7.7 68 573-645 11-81 (907)
58 3pvc_A TRNA 5-methylaminomethy 98.3 3.3E-06 1.1E-10 99.3 14.4 63 122-190 410-472 (689)
59 1dxl_A Dihydrolipoamide dehydr 98.3 4.3E-07 1.5E-11 101.9 6.0 46 337-400 296-341 (470)
60 4dna_A Probable glutathione re 98.3 6.8E-07 2.3E-11 100.0 7.3 46 337-400 285-330 (463)
61 1ryi_A Glycine oxidase; flavop 98.3 1.5E-06 5.2E-11 94.4 9.9 57 123-187 163-219 (382)
62 3dje_A Fructosyl amine: oxygen 98.3 1.5E-06 5E-11 96.5 9.6 61 123-189 160-223 (438)
63 2qae_A Lipoamide, dihydrolipoy 98.3 8E-07 2.8E-11 99.6 7.3 47 337-400 293-339 (468)
64 4a9w_A Monooxygenase; baeyer-v 98.3 4.3E-06 1.5E-10 89.6 12.3 59 123-188 75-133 (357)
65 1frr_A Ferredoxin I; electron 98.2 7.3E-07 2.5E-11 76.0 4.8 53 575-634 13-83 (95)
66 3nyc_A D-arginine dehydrogenas 98.2 4.6E-07 1.6E-11 98.4 4.5 57 123-187 153-209 (381)
67 3axb_A Putative oxidoreductase 98.2 3.6E-06 1.2E-10 93.6 11.7 60 122-188 179-255 (448)
68 2qcu_A Aerobic glycerol-3-phos 98.2 4.6E-06 1.6E-10 94.1 12.2 65 122-188 147-211 (501)
69 2hqm_A GR, grase, glutathione 98.2 1.4E-06 4.7E-11 97.9 7.6 46 337-400 301-346 (479)
70 2zbw_A Thioredoxin reductase; 98.2 2.9E-06 9.8E-11 90.4 9.6 58 123-187 64-121 (335)
71 1frd_A Heterocyst [2Fe-2S] fer 98.2 8.2E-07 2.8E-11 76.1 4.1 53 575-634 16-86 (98)
72 1dgj_A Aldehyde oxidoreductase 98.2 8.5E-07 2.9E-11 105.9 5.7 67 574-645 12-81 (907)
73 3ab1_A Ferredoxin--NADP reduct 98.2 1.2E-06 4E-11 94.5 6.3 59 123-187 73-131 (360)
74 2gjc_A Thiazole biosynthetic e 98.2 3.1E-06 1.1E-10 88.7 9.0 130 1-187 78-239 (326)
75 3l8k_A Dihydrolipoyl dehydroge 98.2 1.8E-06 6.3E-11 96.6 7.2 43 340-400 290-332 (466)
76 3nix_A Flavoprotein/dehydrogen 98.1 0.00014 4.9E-09 79.8 21.9 61 124-187 106-166 (421)
77 1v59_A Dihydrolipoamide dehydr 98.1 6.5E-07 2.2E-11 100.6 2.9 46 337-400 304-349 (478)
78 3itj_A Thioredoxin reductase 1 98.1 8.4E-07 2.9E-11 94.5 3.6 60 123-187 83-142 (338)
79 2w3s_A Xanthine dehydrogenase; 98.1 1.4E-06 4.8E-11 95.8 4.2 67 573-645 10-83 (462)
80 1onf_A GR, grase, glutathione 98.1 4.2E-06 1.4E-10 94.5 8.1 28 1-30 15-42 (500)
81 1xdi_A RV3303C-LPDA; reductase 98.1 3.3E-06 1.1E-10 95.4 6.6 45 338-400 297-341 (499)
82 1awd_A Ferredoxin; electron tr 98.1 3E-06 1E-10 71.8 4.7 52 575-633 12-81 (94)
83 1pj5_A N,N-dimethylglycine oxi 98.0 7.9E-06 2.7E-10 98.2 10.0 60 122-188 149-208 (830)
84 2gf3_A MSOX, monomeric sarcosi 98.0 1.4E-05 4.7E-10 86.9 11.1 58 123-188 149-206 (389)
85 3ic9_A Dihydrolipoamide dehydr 98.0 5.8E-07 2E-11 101.3 -0.2 46 338-401 292-338 (492)
86 1fec_A Trypanothione reductase 98.0 6.5E-06 2.2E-10 92.6 8.2 46 337-400 305-350 (490)
87 2oln_A NIKD protein; flavoprot 98.0 4.1E-05 1.4E-09 83.5 14.3 57 123-187 152-208 (397)
88 2wpf_A Trypanothione reductase 98.0 7.7E-06 2.6E-10 92.1 8.2 46 337-400 309-354 (495)
89 2uzz_A N-methyl-L-tryptophan o 98.0 2E-05 6.8E-10 85.1 11.2 59 123-189 148-206 (372)
90 1a70_A Ferredoxin; iron-sulfur 98.0 4.2E-06 1.4E-10 71.4 4.5 52 575-633 14-83 (97)
91 1iue_A Ferredoxin; electron tr 98.0 4.2E-06 1.4E-10 71.6 4.4 52 575-633 14-83 (98)
92 2eq6_A Pyruvate dehydrogenase 98.0 5.8E-06 2E-10 92.4 6.9 46 337-400 288-333 (464)
93 1czp_A Ferredoxin I; [2Fe-2S] 98.0 5.5E-06 1.9E-10 70.8 4.6 52 575-633 16-85 (98)
94 3c4n_A Uncharacterized protein 98.0 7.7E-06 2.6E-10 89.7 6.8 57 123-187 171-236 (405)
95 1zmd_A Dihydrolipoyl dehydroge 97.9 6.4E-06 2.2E-10 92.4 6.2 46 337-400 299-344 (474)
96 2r9z_A Glutathione amide reduc 97.9 1.3E-05 4.3E-10 89.6 8.5 46 337-400 281-326 (463)
97 3qvp_A Glucose oxidase; oxidor 97.9 4.1E-05 1.4E-09 87.2 12.3 52 135-187 238-293 (583)
98 1jq4_A Methane monooxygenase c 97.9 5.5E-06 1.9E-10 70.8 3.8 53 574-633 16-88 (98)
99 3atr_A Conserved archaeal prot 97.9 3.3E-05 1.1E-09 85.9 10.8 66 124-190 100-165 (453)
100 3cgv_A Geranylgeranyl reductas 97.9 3E-05 1E-09 84.5 10.0 61 124-187 102-162 (397)
101 1l5p_A Ferredoxin; [2Fe-2S] cl 97.9 1.3E-05 4.6E-10 67.6 5.3 62 573-640 10-91 (93)
102 3e1t_A Halogenase; flavoprotei 97.9 5.9E-05 2E-09 85.3 12.1 65 123-189 110-174 (512)
103 3nvw_A Xanthine dehydrogenase/ 97.8 7.5E-06 2.6E-10 75.6 3.4 65 576-645 16-92 (164)
104 1ges_A Glutathione reductase; 97.8 6.7E-06 2.3E-10 91.5 2.2 46 337-400 282-327 (450)
105 2wlb_A ETP1-FD, electron trans 97.7 2.5E-05 8.6E-10 67.4 5.1 40 575-621 16-56 (103)
106 2gmh_A Electron transfer flavo 97.7 5.6E-05 1.9E-09 86.8 9.5 65 124-188 144-218 (584)
107 1wri_A Ferredoxin II, ferredox 97.7 2.6E-05 8.8E-10 65.9 4.7 51 575-633 13-81 (93)
108 3q9t_A Choline dehydrogenase a 97.7 9.9E-05 3.4E-09 84.1 9.7 51 136-187 218-270 (577)
109 2yqu_A 2-oxoglutarate dehydrog 97.6 2.3E-05 8E-10 87.3 4.3 45 338-400 282-326 (455)
110 3g3e_A D-amino-acid oxidase; F 97.6 1.1E-05 3.7E-10 86.6 1.0 49 122-189 140-188 (351)
111 1xlq_A Putidaredoxin, PDX; [2F 97.6 7.4E-05 2.5E-09 64.7 6.1 41 574-620 12-53 (106)
112 3lxf_A Ferredoxin; iron, iron- 97.5 9.5E-05 3.3E-09 63.7 5.8 41 574-620 12-53 (104)
113 3cty_A Thioredoxin reductase; 97.5 0.00042 1.4E-08 72.9 12.1 55 129-184 195-249 (319)
114 3ah7_A [2Fe-2S]ferredoxin; [2F 97.5 7.9E-05 2.7E-09 65.4 5.3 39 575-620 17-56 (113)
115 1b9r_A Protein (terpredoxin); 97.5 6E-05 2.1E-09 65.2 4.5 40 575-620 13-53 (105)
116 2fdn_A Ferredoxin; electron tr 97.5 2.5E-05 8.6E-10 58.7 1.7 47 694-768 5-51 (55)
117 4eqs_A Coenzyme A disulfide re 97.5 2.8E-05 9.5E-10 86.1 2.5 50 135-188 68-117 (437)
118 1i7h_A Ferredoxin; 2Fe-2S,elec 97.5 8.7E-05 3E-09 64.9 5.0 39 575-620 17-56 (111)
119 2bt6_A Adrenodoxin 1; rutheniu 97.5 8.7E-05 3E-09 64.5 5.0 42 574-620 18-60 (108)
120 1zk7_A HGII, reductase, mercur 97.5 0.00014 4.8E-09 81.2 8.1 45 338-400 289-333 (467)
121 1jb0_C Photosystem I iron-sulf 97.5 1E-05 3.4E-10 66.2 -1.1 55 694-768 7-61 (80)
122 1doi_A 2Fe-2S ferredoxin; halo 97.5 9.5E-05 3.3E-09 66.1 5.2 39 576-621 39-78 (128)
123 1rgv_A Ferredoxin; electron tr 97.4 8E-05 2.7E-09 60.8 3.9 46 694-767 5-56 (80)
124 3hui_A Ferredoxin; cytochrome 97.4 0.00012 4.2E-09 65.1 5.2 41 574-620 33-74 (126)
125 3i9v_9 NADH-quinone oxidoreduc 97.4 1.4E-05 4.9E-10 76.9 -1.1 62 694-768 50-112 (182)
126 1uwm_A Ferredoxin VI, FDVI; el 97.4 0.00013 4.4E-09 63.2 5.1 41 574-620 12-53 (106)
127 1c0p_A D-amino acid oxidase; a 97.4 0.00024 8.3E-09 76.3 8.3 48 122-189 140-187 (363)
128 2y5c_A Adrenodoxin-like protei 97.4 0.00011 3.8E-09 64.0 4.5 40 574-620 17-57 (109)
129 3lxd_A FAD-dependent pyridine 97.4 0.0009 3.1E-08 73.3 12.9 56 123-184 193-248 (415)
130 2zvs_A Uncharacterized ferredo 97.4 7.8E-05 2.7E-09 61.7 3.2 45 694-766 5-55 (85)
131 1xer_A Ferredoxin; electron tr 97.4 2.2E-05 7.6E-10 67.7 -0.2 56 693-767 41-96 (103)
132 2fgo_A Ferredoxin; allochromat 97.4 8.4E-05 2.9E-09 61.0 3.2 46 694-767 5-56 (82)
133 3ihg_A RDME; flavoenzyme, anth 97.3 0.00086 2.9E-08 76.2 12.1 64 123-188 119-184 (535)
134 3i3l_A Alkylhalidase CMLS; fla 97.3 0.00085 2.9E-08 76.8 11.8 62 123-187 127-188 (591)
135 1rof_A Ferredoxin; electron tr 97.3 0.0001 3.6E-09 56.2 2.9 48 694-767 7-54 (60)
136 2ywl_A Thioredoxin reductase r 97.3 0.0027 9.3E-08 60.4 13.2 57 122-187 54-110 (180)
137 1bc6_A 7-Fe ferredoxin; electr 97.3 9.8E-05 3.4E-09 59.8 2.4 46 694-767 5-52 (77)
138 1hfe_L Protein (Fe-only hydrog 97.2 7.9E-05 2.7E-09 81.3 2.1 50 692-768 30-80 (421)
139 3ka7_A Oxidoreductase; structu 97.2 0.0022 7.4E-08 70.3 13.7 57 124-187 196-252 (425)
140 3eun_A Ferredoxin; electron tr 97.2 6.3E-05 2.2E-09 61.8 0.8 47 694-768 5-57 (82)
141 1krh_A Benzoate 1,2-dioxygenas 97.2 0.00019 6.3E-09 76.5 4.7 54 574-634 15-90 (338)
142 4gcm_A TRXR, thioredoxin reduc 97.2 0.00025 8.6E-09 74.4 5.7 53 336-405 256-308 (312)
143 1mo9_A ORF3; nucleotide bindin 97.2 0.0022 7.7E-08 72.4 13.9 61 124-186 255-315 (523)
144 3fim_B ARYL-alcohol oxidase; A 97.2 0.00049 1.7E-08 78.2 8.4 53 134-187 218-276 (566)
145 7fd1_A FD1, protein (7-Fe ferr 97.2 4.7E-05 1.6E-09 66.0 -0.3 47 694-768 5-53 (106)
146 3fmw_A Oxygenase; mithramycin, 97.1 0.0011 3.8E-08 75.6 10.0 61 123-187 147-207 (570)
147 1dwl_A Ferredoxin I; electron 97.1 0.00019 6.6E-09 54.4 2.2 48 694-767 6-54 (59)
148 2bry_A NEDD9 interacting prote 97.1 0.00052 1.8E-08 77.1 6.6 65 124-189 166-232 (497)
149 3ics_A Coenzyme A-disulfide re 97.0 0.00034 1.2E-08 80.5 4.8 51 133-187 102-152 (588)
150 1k0i_A P-hydroxybenzoate hydro 97.0 0.00093 3.2E-08 72.6 7.8 63 124-189 103-165 (394)
151 1f2g_A Ferredoxin II; electron 97.0 7.8E-05 2.7E-09 56.6 -0.8 48 695-767 6-53 (58)
152 4a5l_A Thioredoxin reductase; 97.0 0.00051 1.8E-08 71.9 5.1 41 356-404 273-313 (314)
153 1dax_A Ferredoxin I; electron 97.0 2E-05 6.7E-10 61.4 -4.7 50 694-767 8-57 (64)
154 1h98_A Ferredoxin; electron tr 96.9 0.0001 3.6E-09 59.8 -0.6 46 694-767 5-52 (78)
155 2x3n_A Probable FAD-dependent 96.9 0.0027 9.3E-08 69.0 10.0 60 123-188 106-167 (399)
156 2c42_A Pyruvate-ferredoxin oxi 96.9 0.00014 4.8E-09 89.3 -0.5 17 694-710 685-701 (1231)
157 2qa2_A CABE, polyketide oxygen 96.9 0.0056 1.9E-07 68.7 12.5 61 124-188 107-167 (499)
158 3c96_A Flavin-containing monoo 96.8 0.0041 1.4E-07 67.8 11.1 62 124-188 107-170 (410)
159 3n9z_C Adrenodoxin; cytochrome 96.8 0.00024 8.2E-09 62.9 0.6 42 574-620 17-59 (123)
160 2v2k_A Ferredoxin; iron, trans 96.8 0.00018 6.3E-09 62.1 -0.3 47 694-768 5-53 (105)
161 2weu_A Tryptophan 5-halogenase 96.8 0.0042 1.4E-07 70.0 10.6 61 123-189 172-232 (511)
162 2r0c_A REBC; flavin adenine di 96.7 0.011 3.8E-07 67.1 13.9 60 124-188 138-197 (549)
163 1iqz_A Ferredoxin; iron-sulfer 96.7 0.00014 4.8E-09 59.5 -1.4 16 694-709 8-23 (81)
164 3fpz_A Thiazole biosynthetic e 96.7 0.00023 7.8E-09 75.3 -0.2 55 338-403 271-325 (326)
165 3nrn_A Uncharacterized protein 96.7 0.009 3.1E-07 65.3 12.7 56 123-187 188-243 (421)
166 3gyx_B Adenylylsulfate reducta 96.7 0.00014 4.9E-09 68.4 -1.7 50 694-768 6-60 (166)
167 2qa1_A PGAE, polyketide oxygen 96.7 0.0043 1.5E-07 69.6 10.1 61 124-188 106-166 (500)
168 1jnr_B Adenylylsulfate reducta 96.7 0.00016 5.3E-09 66.9 -1.6 49 694-767 7-60 (150)
169 2lfc_A Fumarate reductase, fla 96.6 0.0042 1.4E-07 58.0 7.8 40 230-276 6-48 (160)
170 3iwa_A FAD-dependent pyridine 96.6 0.0086 2.9E-07 66.7 11.7 54 124-184 202-255 (472)
171 2aqj_A Tryptophan halogenase, 96.6 0.0059 2E-07 69.3 10.4 60 124-189 165-224 (538)
172 1sj1_A Ferredoxin; thermostabi 96.6 0.00018 6.2E-09 56.0 -1.8 16 694-709 8-23 (66)
173 2e4g_A Tryptophan halogenase; 96.4 0.0093 3.2E-07 67.8 10.6 61 123-189 193-254 (550)
174 2pyx_A Tryptophan halogenase; 96.3 0.019 6.3E-07 64.9 12.0 60 124-189 175-235 (526)
175 1yvv_A Amine oxidase, flavin-c 96.2 0.015 5.3E-07 61.1 10.4 44 138-187 119-162 (336)
176 2vou_A 2,6-dihydroxypyridine h 96.2 0.021 7.3E-07 61.8 11.4 55 125-188 100-154 (397)
177 3qj4_A Renalase; FAD/NAD(P)-bi 96.1 0.011 3.9E-07 62.5 8.7 53 124-186 112-164 (342)
178 3alj_A 2-methyl-3-hydroxypyrid 96.1 0.017 5.7E-07 62.2 9.9 55 124-188 107-161 (379)
179 2dkh_A 3-hydroxybenzoate hydro 96.0 0.025 8.6E-07 65.4 11.3 65 124-188 141-212 (639)
180 1ti6_B Pyrogallol hydroxytrans 96.0 0.0017 5.8E-08 66.2 1.2 18 693-710 95-112 (274)
181 2ivf_B Ethylbenzene dehydrogen 96.0 0.0011 3.9E-08 69.7 -0.2 46 694-769 181-235 (352)
182 3r9u_A Thioredoxin reductase; 96.0 0.0066 2.2E-07 63.2 5.7 51 337-404 263-313 (315)
183 1q16_B Respiratory nitrate red 95.9 0.0013 4.5E-08 72.3 -0.0 46 693-768 213-267 (512)
184 3rp8_A Flavoprotein monooxygen 95.9 0.029 9.9E-07 60.9 10.7 57 124-189 127-183 (407)
185 2pia_A Phthalate dioxygenase r 95.9 0.0045 1.6E-07 65.1 4.0 38 577-621 249-287 (321)
186 3t37_A Probable dehydrogenase; 95.6 0.1 3.5E-06 58.7 14.3 49 136-187 223-271 (526)
187 2ivf_B Ethylbenzene dehydrogen 95.5 0.0011 3.8E-08 69.7 -2.2 51 693-769 147-199 (352)
188 1kqf_B FDH-N beta S, formate d 95.5 0.0023 7.7E-08 66.2 -0.1 17 694-710 130-146 (294)
189 2xve_A Flavin-containing monoo 95.5 0.13 4.3E-06 57.0 14.0 67 122-188 99-167 (464)
190 1gte_A Dihydropyrimidine dehyd 95.4 0.0019 6.3E-08 79.1 -1.2 38 357-403 471-508 (1025)
191 2q0l_A TRXR, thioredoxin reduc 95.4 0.012 4.1E-07 61.2 5.2 57 123-187 58-114 (311)
192 4dgk_A Phytoene dehydrogenase; 95.4 0.022 7.4E-07 63.8 7.5 58 124-187 221-278 (501)
193 1fl2_A Alkyl hydroperoxide red 95.3 0.015 5.1E-07 60.4 5.6 59 124-187 56-115 (310)
194 1y56_A Hypothetical protein PH 95.3 0.0084 2.9E-07 67.1 3.8 66 572-641 20-89 (493)
195 3zyy_X Iron-sulfur cluster bin 95.3 0.0089 3E-07 67.4 3.9 51 576-633 14-83 (631)
196 3fbs_A Oxidoreductase; structu 95.2 0.013 4.4E-07 60.3 4.5 48 339-404 246-293 (297)
197 3gwf_A Cyclohexanone monooxyge 95.2 0.13 4.6E-06 57.9 13.1 62 122-188 85-148 (540)
198 3s5w_A L-ornithine 5-monooxyge 95.1 0.063 2.2E-06 59.3 10.1 64 123-187 126-192 (463)
199 2vpz_B NRFC protein; oxidoredu 95.0 0.0035 1.2E-07 60.6 -0.5 17 694-710 55-73 (195)
200 1n4w_A CHOD, cholesterol oxida 95.0 0.022 7.6E-07 63.8 6.1 58 129-187 226-288 (504)
201 2cul_A Glucose-inhibited divis 94.9 0.051 1.7E-06 53.9 7.7 58 124-188 68-126 (232)
202 2q7v_A Thioredoxin reductase; 94.8 0.024 8.3E-07 59.3 5.3 52 337-405 263-314 (325)
203 1gpe_A Protein (glucose oxidas 94.7 0.028 9.4E-07 64.3 5.9 54 134-188 241-298 (587)
204 2xdo_A TETX2 protein; tetracyc 94.7 0.086 3E-06 56.9 9.6 57 124-189 128-184 (398)
205 2vpz_B NRFC protein; oxidoredu 94.6 0.0055 1.9E-07 59.2 -0.1 18 693-710 86-103 (195)
206 2vdc_G Glutamate synthase [NAD 94.6 0.031 1.1E-06 61.7 5.9 51 338-406 396-447 (456)
207 2jbv_A Choline oxidase; alcoho 94.6 0.025 8.4E-07 64.1 5.1 60 128-187 212-273 (546)
208 4ap3_A Steroid monooxygenase; 94.6 0.2 6.7E-06 56.6 12.4 61 122-187 97-159 (549)
209 1q16_B Respiratory nitrate red 94.6 0.0034 1.2E-07 69.0 -2.1 50 694-769 181-232 (512)
210 1h0h_B Formate dehydrogenase ( 94.5 0.01 3.5E-07 58.2 1.4 59 694-782 105-178 (214)
211 3p1w_A Rabgdi protein; GDI RAB 94.4 0.047 1.6E-06 60.2 6.6 58 124-186 256-313 (475)
212 1coy_A Cholesterol oxidase; ox 94.4 0.036 1.2E-06 62.1 5.8 58 129-187 231-293 (507)
213 2x8g_A Thioredoxin glutathione 94.4 0.06 2E-06 61.7 7.8 47 337-400 412-458 (598)
214 1vdc_A NTR, NADPH dependent th 94.3 0.057 2E-06 56.5 7.0 57 123-188 69-125 (333)
215 1kqf_B FDH-N beta S, formate d 94.3 0.0049 1.7E-07 63.7 -1.5 16 694-709 97-114 (294)
216 2a87_A TRXR, TR, thioredoxin r 94.2 0.082 2.8E-06 55.5 7.9 56 124-187 71-126 (335)
217 1hyu_A AHPF, alkyl hydroperoxi 94.1 0.041 1.4E-06 62.0 5.5 61 122-187 265-326 (521)
218 3kd9_A Coenzyme A disulfide re 94.1 0.027 9.2E-07 62.1 3.9 45 135-187 70-114 (449)
219 1lvl_A Dihydrolipoamide dehydr 94.1 0.085 2.9E-06 58.2 7.9 44 339-400 286-329 (458)
220 3fbs_A Oxidoreductase; structu 94.1 0.23 8E-06 50.6 10.8 57 123-187 55-112 (297)
221 3unc_A Xanthine dehydrogenase/ 94.0 0.025 8.6E-07 70.0 3.8 65 575-645 15-93 (1332)
222 1w4x_A Phenylacetone monooxyge 93.9 0.37 1.3E-05 54.3 12.9 61 123-188 93-155 (542)
223 1trb_A Thioredoxin reductase; 93.8 0.05 1.7E-06 56.6 5.2 56 123-187 61-116 (320)
224 3uox_A Otemo; baeyer-villiger 93.8 0.17 5.9E-06 57.1 9.8 62 122-188 85-148 (545)
225 4gcm_A TRXR, thioredoxin reduc 93.7 0.23 7.9E-06 51.4 10.0 22 1-22 19-40 (312)
226 1trb_A Thioredoxin reductase; 93.7 0.16 5.3E-06 52.8 8.7 61 124-185 184-245 (320)
227 3cty_A Thioredoxin reductase; 93.6 0.28 9.6E-06 50.8 10.4 56 123-187 71-126 (319)
228 4gut_A Lysine-specific histone 93.3 0.51 1.8E-05 55.4 13.0 41 137-184 542-582 (776)
229 1ti6_B Pyrogallol hydroxytrans 93.2 0.017 5.7E-07 58.9 0.2 16 694-709 65-82 (274)
230 1ju2_A HydroxynitrIle lyase; f 93.1 0.049 1.7E-06 61.5 3.9 57 130-187 200-261 (536)
231 1kdg_A CDH, cellobiose dehydro 93.1 0.03 1E-06 63.5 2.1 58 129-187 200-261 (546)
232 3k7m_X 6-hydroxy-L-nicotine ox 93.1 0.5 1.7E-05 51.3 12.0 43 135-185 215-257 (431)
233 3g5s_A Methylenetetrahydrofola 92.9 0.12 4.1E-06 55.0 6.1 44 353-406 322-365 (443)
234 3klj_A NAD(FAD)-dependent dehy 92.8 0.058 2E-06 58.1 3.8 45 134-187 72-116 (385)
235 1cjc_A Protein (adrenodoxin re 92.8 0.053 1.8E-06 59.9 3.4 52 337-405 345-397 (460)
236 3itj_A Thioredoxin reductase 1 92.7 0.3 1E-05 50.9 9.1 56 129-185 213-269 (338)
237 1xhc_A NADH oxidase /nitrite r 92.4 0.065 2.2E-06 57.3 3.5 49 338-400 248-296 (367)
238 3ef6_A Toluene 1,2-dioxygenase 92.3 0.076 2.6E-06 57.7 3.8 52 338-400 255-308 (410)
239 1fl2_A Alkyl hydroperoxide red 92.2 0.4 1.4E-05 49.4 9.2 54 130-184 185-239 (310)
240 3sx6_A Sulfide-quinone reducta 92.1 0.12 4.3E-06 56.5 5.4 59 337-406 283-347 (437)
241 1pn0_A Phenol 2-monooxygenase; 92.0 0.74 2.5E-05 53.2 12.0 65 124-188 119-231 (665)
242 3pl8_A Pyranose 2-oxidase; sub 91.9 0.18 6.1E-06 57.9 6.4 52 137-188 273-325 (623)
243 3oc4_A Oxidoreductase, pyridin 91.8 0.046 1.6E-06 60.3 1.5 48 134-187 68-115 (452)
244 3vrd_B FCCB subunit, flavocyto 91.7 0.19 6.6E-06 54.1 6.2 56 338-406 272-327 (401)
245 3zyv_A AOH1; oxidoreductase, m 91.7 0.13 4.5E-06 64.0 5.4 64 575-644 19-96 (1335)
246 3fg2_P Putative rubredoxin red 91.6 0.071 2.4E-06 57.8 2.6 53 338-400 255-309 (404)
247 3fg2_P Putative rubredoxin red 91.4 0.3 1E-05 52.8 7.4 59 123-187 183-241 (404)
248 3h28_A Sulfide-quinone reducta 91.4 0.17 5.9E-06 55.2 5.5 58 339-406 274-336 (430)
249 2bcg_G Secretory pathway GDP d 91.1 0.19 6.4E-06 55.4 5.4 57 124-187 242-300 (453)
250 4gde_A UDP-galactopyranose mut 90.8 1.6 5.6E-05 48.3 13.0 52 124-184 222-273 (513)
251 2gmh_A Electron transfer flavo 90.7 0.036 1.2E-06 63.3 -0.9 42 358-403 345-386 (584)
252 1d5t_A Guanine nucleotide diss 90.7 0.15 5.1E-06 55.8 4.1 58 124-188 234-291 (433)
253 2x8g_A Thioredoxin glutathione 90.7 0.17 5.8E-06 58.0 4.7 20 1-20 120-139 (598)
254 1lqt_A FPRA; NADP+ derivative, 90.7 0.11 3.9E-06 57.1 3.2 52 337-404 337-388 (456)
255 3ntd_A FAD-dependent pyridine 90.6 0.13 4.6E-06 58.3 3.8 48 136-187 70-117 (565)
256 1h0h_B Formate dehydrogenase ( 90.5 0.02 7E-07 56.0 -2.7 18 752-769 106-125 (214)
257 2gqw_A Ferredoxin reductase; f 90.5 0.12 4.1E-06 56.1 3.0 52 338-401 253-308 (408)
258 2cdu_A NADPH oxidase; flavoenz 90.5 0.11 3.7E-06 57.3 2.7 51 134-188 68-118 (452)
259 3cgb_A Pyridine nucleotide-dis 90.4 0.13 4.5E-06 57.1 3.4 48 136-187 105-152 (480)
260 2bc0_A NADH oxidase; flavoprot 90.1 0.18 6.1E-06 56.2 4.1 48 134-187 102-149 (490)
261 3h8l_A NADH oxidase; membrane 90.0 0.32 1.1E-05 52.5 6.1 52 337-404 285-337 (409)
262 2v3a_A Rubredoxin reductase; a 89.9 0.17 5.9E-06 54.2 3.8 45 134-188 70-114 (384)
263 1mo9_A ORF3; nucleotide bindin 89.8 0.93 3.2E-05 50.8 9.8 46 337-400 332-377 (523)
264 3r9u_A Thioredoxin reductase; 89.5 0.65 2.2E-05 47.7 7.7 51 135-187 194-244 (315)
265 1q1r_A Putidaredoxin reductase 89.5 0.14 4.9E-06 55.9 2.7 46 134-188 70-115 (431)
266 3mm5_A Sulfite reductase, diss 89.2 0.058 2E-06 58.0 -0.7 19 751-769 283-301 (418)
267 3mm5_B Sulfite reductase, diss 89.2 0.027 9.1E-07 60.0 -3.4 17 751-767 238-254 (366)
268 4hb9_A Similarities with proba 88.9 1.7 5.7E-05 46.5 10.8 46 137-188 122-167 (412)
269 3hyw_A Sulfide-quinone reducta 88.9 0.37 1.3E-05 52.5 5.5 58 339-406 274-336 (430)
270 1gte_A Dihydropyrimidine dehyd 88.8 0.3 1E-05 59.6 5.1 17 693-709 949-965 (1025)
271 3ab1_A Ferredoxin--NADP reduct 88.8 0.68 2.3E-05 48.8 7.4 57 126-184 204-260 (360)
272 1m6i_A Programmed cell death p 88.7 0.14 4.7E-06 57.1 1.8 45 135-188 101-145 (493)
273 2zbw_A Thioredoxin reductase; 88.2 1.6 5.5E-05 45.2 9.8 58 125-184 192-249 (335)
274 1nhp_A NADH peroxidase; oxidor 87.9 0.19 6.4E-06 55.2 2.2 51 134-188 66-116 (447)
275 2q7v_A Thioredoxin reductase; 87.9 1.5 5E-05 45.4 9.1 55 130-186 193-248 (325)
276 2cul_A Glucose-inhibited divis 87.7 0.39 1.3E-05 47.4 4.3 36 357-402 196-231 (232)
277 3dgh_A TRXR-1, thioredoxin red 87.7 1.5 5E-05 48.5 9.5 62 124-186 227-288 (483)
278 3f8d_A Thioredoxin reductase ( 87.6 1.6 5.4E-05 44.9 9.1 54 131-186 196-250 (323)
279 2q0l_A TRXR, thioredoxin reduc 87.5 1.4 4.8E-05 45.2 8.7 55 130-185 184-239 (311)
280 1hyu_A AHPF, alkyl hydroperoxi 87.0 1.5 5.3E-05 48.9 9.1 54 130-184 396-450 (521)
281 1v59_A Dihydrolipoamide dehydr 87.0 2 6.9E-05 47.3 10.0 63 125-187 225-287 (478)
282 4g6h_A Rotenone-insensitive NA 86.8 0.49 1.7E-05 52.7 4.9 52 336-402 349-400 (502)
283 3lzw_A Ferredoxin--NADP reduct 86.4 1.3 4.3E-05 45.9 7.6 52 131-184 196-247 (332)
284 1vdc_A NTR, NADPH dependent th 86.4 2 6.9E-05 44.4 9.2 50 135-185 206-257 (333)
285 3oc4_A Oxidoreductase, pyridin 86.3 1.4 4.7E-05 48.3 8.2 57 123-187 188-244 (452)
286 3dgz_A Thioredoxin reductase 2 86.1 2.1 7.3E-05 47.3 9.7 60 124-184 225-284 (488)
287 1lvl_A Dihydrolipoamide dehydr 85.4 0.42 1.5E-05 52.5 3.4 45 130-187 102-146 (458)
288 1q1r_A Putidaredoxin reductase 85.3 1.3 4.4E-05 48.2 7.2 58 123-186 190-249 (431)
289 1vg0_A RAB proteins geranylger 85.3 1.4 4.6E-05 50.3 7.5 56 124-184 378-434 (650)
290 3o0h_A Glutathione reductase; 85.1 2.1 7E-05 47.3 8.8 55 124-185 232-286 (484)
291 2gv8_A Monooxygenase; FMO, FAD 84.7 3 0.0001 45.5 9.8 64 123-188 114-178 (447)
292 3nks_A Protoporphyrinogen oxid 84.6 0.83 2.8E-05 50.3 5.3 57 124-187 234-290 (477)
293 1zmd_A Dihydrolipoyl dehydroge 84.5 2.3 7.9E-05 46.7 9.0 63 124-187 220-282 (474)
294 2hqm_A GR, grase, glutathione 84.5 1.4 4.9E-05 48.6 7.2 60 124-187 226-285 (479)
295 4dna_A Probable glutathione re 84.5 1.2 4.2E-05 48.9 6.6 58 124-187 211-268 (463)
296 3urh_A Dihydrolipoyl dehydroge 84.4 2.6 8.9E-05 46.6 9.3 61 124-186 239-299 (491)
297 1fec_A Trypanothione reductase 84.3 1.7 5.7E-05 48.2 7.6 58 124-187 231-288 (490)
298 3d1c_A Flavin-containing putat 84.3 1.8 6.3E-05 45.5 7.7 59 122-188 86-144 (369)
299 2fdn_A Ferredoxin; electron tr 84.0 0.37 1.3E-05 35.2 1.5 17 752-768 6-22 (55)
300 2gag_A Heterotetrameric sarcos 83.8 0.76 2.6E-05 55.6 4.9 53 337-403 392-444 (965)
301 2fgo_A Ferredoxin; allochromat 83.5 0.39 1.3E-05 38.6 1.5 17 752-768 6-22 (82)
302 2wpf_A Trypanothione reductase 83.2 2 6.9E-05 47.6 7.8 57 125-187 236-292 (495)
303 3eun_A Ferredoxin; electron tr 83.2 0.4 1.4E-05 38.5 1.5 17 752-768 6-22 (82)
304 2vvm_A Monoamine oxidase N; FA 83.2 1.9 6.4E-05 47.7 7.5 58 123-187 254-312 (495)
305 2pa8_D DNA-directed RNA polyme 83.0 0.2 6.9E-06 50.6 -0.5 15 752-766 201-215 (265)
306 3kkj_A Amine oxidase, flavin-c 82.9 0.74 2.5E-05 45.6 3.7 39 357-405 292-330 (336)
307 1jb0_C Photosystem I iron-sulf 82.8 0.36 1.2E-05 38.4 1.0 17 752-768 8-24 (80)
308 1rgv_A Ferredoxin; electron tr 82.6 0.39 1.3E-05 38.3 1.2 17 752-768 6-22 (80)
309 1f2g_A Ferredoxin II; electron 82.6 0.31 1E-05 36.1 0.5 18 752-769 6-23 (58)
310 2cdu_A NADPH oxidase; flavoenz 82.6 1.6 5.4E-05 47.8 6.5 58 123-187 190-247 (452)
311 3ef6_A Toluene 1,2-dioxygenase 82.6 1.3 4.4E-05 47.8 5.7 57 124-187 185-241 (410)
312 4b63_A L-ornithine N5 monooxyg 82.4 3.9 0.00013 45.3 9.7 66 122-187 143-214 (501)
313 1rof_A Ferredoxin; electron tr 82.2 0.37 1.3E-05 35.7 0.9 18 752-769 8-25 (60)
314 2zvs_A Uncharacterized ferredo 82.2 0.42 1.4E-05 38.7 1.2 17 752-768 6-22 (85)
315 3dk9_A Grase, GR, glutathione 81.7 3.2 0.00011 45.6 8.7 64 124-187 228-293 (478)
316 2gag_A Heterotetrameric sarcos 81.6 1.1 3.6E-05 54.3 4.9 63 576-640 31-107 (965)
317 3lxd_A FAD-dependent pyridine 81.0 0.83 2.8E-05 49.4 3.4 52 338-400 265-320 (415)
318 1dax_A Ferredoxin I; electron 80.9 0.44 1.5E-05 36.0 0.8 15 752-766 9-23 (64)
319 1xer_A Ferredoxin; electron tr 80.7 0.46 1.6E-05 40.0 1.0 17 752-768 43-59 (103)
320 1dxl_A Dihydrolipoamide dehydr 80.3 3.6 0.00012 45.1 8.4 62 124-187 218-279 (470)
321 3s5w_A L-ornithine 5-monooxyge 80.2 5.2 0.00018 43.6 9.7 47 137-185 329-375 (463)
322 2hj1_A Hypothetical protein; s 80.2 1.9 6.5E-05 35.8 4.5 59 574-643 27-86 (97)
323 3or1_A Sulfite reductase alpha 80.1 0.24 8.2E-06 53.3 -1.3 19 751-769 300-318 (437)
324 3lad_A Dihydrolipoamide dehydr 79.8 3.9 0.00013 44.9 8.5 60 124-187 221-280 (476)
325 1ges_A Glutathione reductase; 79.5 2.7 9.2E-05 45.9 7.0 58 124-187 208-265 (450)
326 1iqz_A Ferredoxin; iron-sulfer 78.8 0.55 1.9E-05 37.6 0.8 16 752-767 9-24 (81)
327 2qae_A Lipoamide, dihydrolipoy 78.8 4.8 0.00016 44.0 8.8 61 124-187 215-276 (468)
328 7fd1_A FD1, protein (7-Fe ferr 78.7 0.6 2E-05 39.6 1.1 19 694-712 36-54 (106)
329 2v3a_A Rubredoxin reductase; a 78.6 4.4 0.00015 43.0 8.2 57 123-186 186-242 (384)
330 3i9v_1 NADH-quinone oxidoreduc 78.1 0.45 1.5E-05 51.1 0.1 72 694-783 350-423 (438)
331 2eq6_A Pyruvate dehydrogenase 78.1 4.2 0.00014 44.5 8.0 62 124-187 210-271 (464)
332 1xdi_A RV3303C-LPDA; reductase 77.9 3.8 0.00013 45.3 7.7 56 125-187 224-279 (499)
333 3i9v_9 NADH-quinone oxidoreduc 77.7 0.78 2.7E-05 43.2 1.7 18 751-768 50-67 (182)
334 4dgk_A Phytoene dehydrogenase; 77.7 1.3 4.4E-05 49.1 3.7 40 357-405 455-494 (501)
335 1m6i_A Programmed cell death p 77.7 3.6 0.00012 45.5 7.3 55 124-185 226-280 (493)
336 3ic9_A Dihydrolipoamide dehydr 77.5 8.8 0.0003 42.3 10.5 60 124-187 215-274 (492)
337 1onf_A GR, grase, glutathione 77.3 4.2 0.00014 45.0 7.8 59 124-187 217-275 (500)
338 2r9z_A Glutathione amide reduc 77.2 3.9 0.00013 44.8 7.5 58 124-187 207-264 (463)
339 1dwl_A Ferredoxin I; electron 77.1 0.73 2.5E-05 33.9 1.0 18 752-769 7-24 (59)
340 2v2k_A Ferredoxin; iron, trans 77.0 0.72 2.5E-05 39.0 1.1 18 694-711 36-53 (105)
341 3kkj_A Amine oxidase, flavin-c 77.0 0.87 3E-05 45.1 1.9 26 1-26 15-40 (336)
342 1cjc_A Protein (adrenodoxin re 76.4 5 0.00017 43.9 8.0 51 137-187 270-333 (460)
343 2a8x_A Dihydrolipoyl dehydroge 76.0 6.2 0.00021 43.1 8.7 58 124-185 212-269 (464)
344 3k30_A Histamine dehydrogenase 76.0 4.3 0.00015 47.0 7.7 53 127-185 570-622 (690)
345 1ebd_A E3BD, dihydrolipoamide 75.3 7.4 0.00025 42.3 9.0 58 124-185 211-268 (455)
346 3cgb_A Pyridine nucleotide-dis 75.1 4.4 0.00015 44.6 7.1 55 124-186 227-281 (480)
347 2a87_A TRXR, TR, thioredoxin r 75.0 3.4 0.00012 42.8 5.9 49 135-185 202-250 (335)
348 1b37_A Protein (polyamine oxid 73.3 3.9 0.00013 44.8 6.1 56 124-186 206-269 (472)
349 1zk7_A HGII, reductase, mercur 73.1 5.4 0.00019 43.6 7.2 56 124-187 216-271 (467)
350 2bc0_A NADH oxidase; flavoprot 72.4 4.7 0.00016 44.4 6.6 54 124-185 236-289 (490)
351 3qfa_A Thioredoxin reductase 1 72.4 12 0.00041 41.5 9.9 61 124-184 250-312 (519)
352 3vr8_B Iron-sulfur subunit of 71.6 1.6 5.4E-05 44.2 2.2 19 750-768 178-196 (282)
353 1sj1_A Ferredoxin; thermostabi 70.9 1.1 3.7E-05 33.9 0.6 17 752-768 9-25 (66)
354 1jnr_B Adenylylsulfate reducta 70.9 0.82 2.8E-05 41.7 -0.1 18 694-711 44-61 (150)
355 1nhp_A NADH peroxidase; oxidor 70.7 5.4 0.00019 43.3 6.5 57 123-187 190-246 (447)
356 2yqu_A 2-oxoglutarate dehydrog 70.3 7.1 0.00024 42.5 7.3 58 124-188 208-265 (455)
357 2gqw_A Ferredoxin reductase; f 69.3 7.5 0.00026 41.6 7.1 53 124-187 187-239 (408)
358 3d1c_A Flavin-containing putat 68.6 3.4 0.00012 43.4 4.1 21 1-21 17-38 (369)
359 3gyx_B Adenylylsulfate reducta 68.2 1 3.5E-05 41.8 -0.1 18 694-711 43-60 (166)
360 1h98_A Ferredoxin; electron tr 68.1 1.6 5.4E-05 34.5 1.1 17 752-768 6-24 (78)
361 4g6h_A Rotenone-insensitive NA 67.7 10 0.00035 41.9 7.9 59 123-186 271-331 (502)
362 1bc6_A 7-Fe ferredoxin; electr 67.6 1.7 5.9E-05 34.1 1.2 17 752-768 6-24 (77)
363 2xve_A Flavin-containing monoo 67.4 17 0.0006 39.5 9.7 26 1-26 15-46 (464)
364 1rp0_A ARA6, thiazole biosynth 66.9 1.4 4.9E-05 44.7 0.7 47 357-405 231-277 (284)
365 1ep3_B Dihydroorotate dehydrog 65.8 1.9 6.6E-05 43.2 1.4 30 600-629 219-251 (262)
366 3ics_A Coenzyme A-disulfide re 65.4 8.8 0.0003 43.3 7.0 54 124-186 228-281 (588)
367 2ivd_A PPO, PPOX, protoporphyr 65.4 7.7 0.00026 42.4 6.4 57 124-187 238-294 (478)
368 3cf4_A Acetyl-COA decarboxylas 64.7 2.8 9.5E-05 49.1 2.6 26 751-776 414-439 (807)
369 1s3e_A Amine oxidase [flavin-c 63.9 9.3 0.00032 42.3 6.8 54 124-187 215-268 (520)
370 1hfe_L Protein (Fe-only hydrog 63.7 2.1 7.3E-05 46.2 1.3 19 694-712 63-81 (421)
371 1y56_A Hypothetical protein PH 63.6 9.4 0.00032 42.1 6.6 62 122-188 159-220 (493)
372 1lqt_A FPRA; NADP+ derivative, 62.4 9.2 0.00031 41.7 6.2 59 127-187 249-326 (456)
373 3ntd_A FAD-dependent pyridine 62.3 15 0.00053 41.0 8.2 56 124-185 192-265 (565)
374 2vdc_G Glutamate synthase [NAD 61.9 2.8 9.5E-05 45.9 1.8 52 132-185 310-376 (456)
375 1ojt_A Surface protein; redox- 61.8 11 0.00039 41.2 6.9 59 125-187 227-286 (482)
376 2h88_B Succinate dehydrogenase 61.3 2.1 7.2E-05 42.7 0.7 19 750-768 154-172 (252)
377 1o94_A Tmadh, trimethylamine d 60.7 3.1 0.00011 48.5 2.1 37 357-403 664-700 (729)
378 3jsk_A Cypbp37 protein; octame 60.2 3 0.0001 43.5 1.7 46 357-404 291-336 (344)
379 2bcg_G Secretory pathway GDP d 59.5 3.5 0.00012 45.0 2.1 26 1-26 24-49 (453)
380 3i6d_A Protoporphyrinogen oxid 58.9 12 0.00041 40.5 6.4 55 124-187 235-289 (470)
381 3or1_B Sulfite reductase beta; 57.6 1.9 6.7E-05 45.9 -0.4 17 694-710 255-271 (386)
382 3h8l_A NADH oxidase; membrane 57.3 9.9 0.00034 40.6 5.2 54 123-187 217-270 (409)
383 2wdq_B Succinate dehydrogenase 57.2 2.7 9.4E-05 41.4 0.7 18 750-767 145-162 (238)
384 2jae_A L-amino acid oxidase; o 56.8 20 0.00069 39.1 7.8 57 124-186 239-295 (489)
385 3or1_B Sulfite reductase beta; 56.8 2.9 0.0001 44.5 0.9 17 751-767 255-271 (386)
386 1kf6_B Fumarate reductase iron 56.7 2.2 7.5E-05 42.3 -0.1 18 693-710 200-217 (243)
387 2q5w_D Molybdopterin convertin 56.6 11 0.00039 29.3 4.2 58 574-643 17-74 (77)
388 2bs2_B Quinol-fumarate reducta 56.2 1.8 6.3E-05 42.8 -0.8 18 751-768 148-165 (241)
389 3hyw_A Sulfide-quinone reducta 56.2 14 0.00049 39.7 6.3 55 126-187 202-256 (430)
390 2kl0_A Putative thiamin biosyn 55.9 16 0.00054 28.4 4.8 50 577-643 10-62 (73)
391 2k5p_A THis protein, thiamine- 55.7 12 0.00041 29.5 4.1 48 581-643 16-66 (78)
392 3mm5_B Sulfite reductase, diss 55.4 2.4 8.1E-05 44.9 -0.1 17 694-710 238-254 (366)
393 3mm5_A Sulfite reductase, diss 55.2 2.2 7.7E-05 45.7 -0.4 18 694-711 283-300 (418)
394 1vjk_A Molybdopterin convertin 55.0 28 0.00094 28.7 6.5 67 574-643 28-95 (98)
395 3fpz_A Thiazole biosynthetic e 54.9 4.1 0.00014 42.1 1.6 26 1-26 78-105 (326)
396 2gjc_A Thiazole biosynthetic e 54.9 4.3 0.00015 42.0 1.7 43 358-402 282-324 (326)
397 3h28_A Sulfide-quinone reducta 54.5 16 0.00054 39.3 6.3 55 126-187 202-256 (430)
398 3lov_A Protoporphyrinogen oxid 54.4 8.9 0.0003 41.8 4.4 54 124-187 236-289 (475)
399 1xhc_A NADH oxidase /nitrite r 54.1 14 0.00049 38.8 5.7 52 124-187 183-234 (367)
400 3klj_A NAD(FAD)-dependent dehy 53.6 12 0.00041 39.7 5.1 50 337-400 244-293 (385)
401 2yg5_A Putrescine oxidase; oxi 53.1 10 0.00035 41.0 4.6 53 124-186 215-267 (453)
402 1b37_A Protein (polyamine oxid 52.8 12 0.00042 40.7 5.1 42 357-405 420-461 (472)
403 2c42_A Pyruvate-ferredoxin oxi 49.6 4.4 0.00015 49.9 0.9 18 751-768 685-702 (1231)
404 4b1b_A TRXR, thioredoxin reduc 49.0 25 0.00087 39.1 7.0 56 124-186 263-318 (542)
405 4a5l_A Thioredoxin reductase; 49.0 54 0.0019 32.8 9.2 51 136-187 200-250 (314)
406 3iwa_A FAD-dependent pyridine 48.4 23 0.00079 38.5 6.5 48 136-187 78-125 (472)
407 3or1_A Sulfite reductase alpha 47.8 3.5 0.00012 44.3 -0.3 17 694-710 300-316 (437)
408 1ps9_A 2,4-dienoyl-COA reducta 47.6 26 0.00089 40.2 7.0 52 128-187 577-628 (671)
409 3k30_A Histamine dehydrogenase 47.1 7.5 0.00026 44.9 2.3 39 357-405 639-677 (690)
410 3p1w_A Rabgdi protein; GDI RAB 46.3 7.5 0.00026 42.6 2.0 26 1-26 33-58 (475)
411 2b9w_A Putative aminooxidase; 46.1 25 0.00086 37.4 6.2 53 124-187 206-258 (424)
412 1i8t_A UDP-galactopyranose mut 46.1 7.5 0.00026 41.0 1.9 27 1-27 14-40 (367)
413 3hdq_A UDP-galactopyranose mut 45.3 8.2 0.00028 41.2 2.1 28 1-28 42-69 (397)
414 2jae_A L-amino acid oxidase; o 45.1 7.1 0.00024 42.8 1.6 39 357-403 448-486 (489)
415 3c8y_A Iron hydrogenase 1; dit 45.1 4 0.00014 46.0 -0.4 19 694-712 187-205 (574)
416 1rsg_A FMS1 protein; FAD bindi 44.4 18 0.00061 40.0 4.8 54 124-185 202-255 (516)
417 1v0j_A UDP-galactopyranose mut 42.8 8.3 0.00028 41.1 1.7 27 1-27 20-47 (399)
418 4eqs_A Coenzyme A disulfide re 42.2 40 0.0014 36.2 7.1 49 125-184 189-237 (437)
419 2yg5_A Putrescine oxidase; oxi 42.0 9.2 0.00031 41.4 1.9 38 357-401 413-450 (453)
420 2b9w_A Putative aminooxidase; 42.0 9.2 0.00032 40.9 1.9 26 1-26 19-45 (424)
421 3nks_A Protoporphyrinogen oxid 41.8 7.6 0.00026 42.4 1.2 27 1-27 15-43 (477)
422 3po0_A Small archaeal modifier 41.5 37 0.0013 27.2 5.1 68 573-643 18-86 (89)
423 3ka7_A Oxidoreductase; structu 39.7 15 0.00051 39.2 3.2 35 357-398 389-423 (425)
424 2ivd_A PPO, PPOX, protoporphyr 39.6 9.5 0.00033 41.6 1.5 26 1-26 29-54 (478)
425 2iid_A L-amino-acid oxidase; f 39.3 42 0.0014 36.6 6.8 55 124-186 241-297 (498)
426 3kd9_A Coenzyme A disulfide re 39.3 36 0.0012 36.7 6.2 53 124-185 190-242 (449)
427 1rsg_A FMS1 protein; FAD bindi 39.1 10 0.00035 41.9 1.8 41 358-405 470-510 (516)
428 1s3e_A Amine oxidase [flavin-c 38.9 10 0.00035 42.0 1.7 41 357-404 416-456 (520)
429 1f0z_A THis protein; ubiquitin 38.9 28 0.00094 26.2 3.6 51 577-643 10-63 (66)
430 3l8k_A Dihydrolipoyl dehydroge 38.4 40 0.0014 36.5 6.4 47 139-187 226-272 (466)
431 4fk1_A Putative thioredoxin re 38.3 26 0.00087 35.4 4.5 53 128-187 184-236 (304)
432 1tyg_B YJBS; alpha beta barrel 37.4 39 0.0013 27.2 4.5 52 577-643 30-84 (87)
433 2l52_A Methanosarcina acetivor 37.3 62 0.0021 26.6 5.9 66 573-643 21-96 (99)
434 3c4a_A Probable tryptophan hyd 36.6 8.3 0.00028 40.7 0.4 48 123-188 97-144 (381)
435 2e1m_A L-glutamate oxidase; L- 36.5 12 0.00039 39.7 1.5 25 1-25 57-82 (376)
436 3i6d_A Protoporphyrinogen oxid 36.0 7.5 0.00026 42.2 -0.0 36 357-402 433-468 (470)
437 2l32_A Small archaeal modifier 35.6 29 0.00099 27.0 3.3 35 574-624 12-46 (74)
438 1d5t_A Guanine nucleotide diss 35.4 14 0.00047 39.9 1.9 26 1-26 19-44 (433)
439 2vvm_A Monoamine oxidase N; FA 35.2 12 0.00042 41.0 1.5 41 357-404 447-487 (495)
440 1fm0_D Molybdopterin convertin 34.5 34 0.0011 26.8 3.7 61 574-643 18-78 (81)
441 1sez_A Protoporphyrinogen oxid 34.4 13 0.00045 40.8 1.6 58 124-186 243-307 (504)
442 4dsg_A UDP-galactopyranose mut 34.2 18 0.00063 39.6 2.7 52 124-186 216-269 (484)
443 3uox_A Otemo; baeyer-villiger 34.0 39 0.0013 37.6 5.4 42 133-186 347-390 (545)
444 1sez_A Protoporphyrinogen oxid 33.6 25 0.00085 38.5 3.7 38 357-404 458-495 (504)
445 3j16_B RLI1P; ribosome recycli 33.5 7.5 0.00026 44.0 -0.6 17 694-710 52-68 (608)
446 2bi7_A UDP-galactopyranose mut 33.3 17 0.00057 38.6 2.1 27 1-27 16-42 (384)
447 3sx6_A Sulfide-quinone reducta 32.5 90 0.0031 33.3 8.0 55 126-186 210-268 (437)
448 3j16_B RLI1P; ribosome recycli 32.4 12 0.0004 42.4 0.8 17 751-767 52-68 (608)
449 3nrn_A Uncharacterized protein 31.8 27 0.00091 37.2 3.5 26 1-26 13-38 (421)
450 3ihm_A Styrene monooxygenase A 31.4 16 0.00056 39.2 1.7 21 1-21 35-55 (430)
451 2e1m_C L-glutamate oxidase; L- 31.4 41 0.0014 31.2 4.3 39 357-403 115-153 (181)
452 3pl8_A Pyranose 2-oxidase; sub 31.3 17 0.00057 41.4 1.8 25 1-25 59-83 (623)
453 1o94_A Tmadh, trimethylamine d 31.3 43 0.0015 38.7 5.4 27 1-27 402-428 (729)
454 3atr_A Conserved archaeal prot 31.1 67 0.0023 34.5 6.7 43 358-404 280-322 (453)
455 2pa8_D DNA-directed RNA polyme 29.7 9 0.00031 38.3 -0.7 16 694-709 200-215 (265)
456 1rws_A Hypothetical protein PF 29.3 24 0.00083 27.5 1.9 50 577-643 25-74 (77)
457 3c4a_A Probable tryptophan hyd 28.4 15 0.00052 38.6 0.8 37 360-400 262-298 (381)
458 3rpf_C Molybdopterin convertin 27.6 71 0.0024 24.5 4.4 51 584-643 21-71 (74)
459 3i9v_3 NADH-quinone oxidoreduc 27.4 12 0.00039 44.0 -0.5 18 695-712 218-235 (783)
460 3lov_A Protoporphyrinogen oxid 26.8 18 0.0006 39.4 1.0 36 357-402 430-465 (475)
461 3k7m_X 6-hydroxy-L-nicotine ox 26.5 60 0.002 34.4 5.2 37 357-400 388-424 (431)
462 3gwf_A Cyclohexanone monooxyge 25.9 42 0.0014 37.3 3.8 26 1-26 21-47 (540)
463 3ayj_A Pro-enzyme of L-phenyla 25.5 64 0.0022 37.1 5.3 59 124-184 347-411 (721)
464 2z3y_A Lysine-specific histone 25.0 56 0.0019 37.3 4.8 46 138-185 410-456 (662)
465 2iid_A L-amino-acid oxidase; f 24.8 20 0.0007 39.2 1.0 39 357-403 447-485 (498)
466 2l05_A Serine/threonine-protei 24.0 1.1E+02 0.0037 24.9 4.8 68 569-648 24-95 (95)
467 3qj4_A Renalase; FAD/NAD(P)-bi 24.0 33 0.0011 35.3 2.4 33 358-400 308-340 (342)
468 2kmm_A Guanosine-3',5'-BIS(dip 23.9 81 0.0028 23.8 4.1 43 578-635 14-56 (73)
469 2cu3_A Unknown function protei 23.5 93 0.0032 23.0 4.3 50 577-643 9-61 (64)
470 1ryj_A Unknown; beta/alpha pro 23.2 1.4E+02 0.0049 22.5 5.3 50 577-643 18-67 (70)
471 3hvz_A Uncharacterized protein 23.2 60 0.0021 25.4 3.2 42 579-635 20-61 (78)
472 3g5s_A Methylenetetrahydrofola 23.1 33 0.0011 36.5 2.1 22 1-22 14-35 (443)
473 2ywl_A Thioredoxin reductase r 21.9 37 0.0013 30.9 2.1 52 337-405 122-173 (180)
474 2g1e_A Hypothetical protein TA 20.5 1.2E+02 0.0041 24.0 4.7 65 574-643 18-87 (90)
475 2z3y_A Lysine-specific histone 20.3 1.7E+02 0.006 33.1 7.7 41 357-404 620-660 (662)
No 1
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=100.00 E-value=2.5e-99 Score=873.14 Aligned_cols=566 Identities=51% Similarity=0.844 Sum_probs=509.3
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||++|+++|++|+||||....+|+|.+++||+++..+....|+++.|+.|+++.+.+++|+++++.+++++++.++||
T Consensus 31 l~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~~l~~~s~~~i~~L 110 (621)
T 2h88_A 31 LRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVIEL 110 (621)
T ss_dssp HHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999888888999999999877654478999999999999999999999999999999999999
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCC-CCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGE-KPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDIL 159 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~-~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~ 159 (786)
+++|++|.+..+|.+..+.+++|+..|+. ...+|.++..+.+|..++..|.+++++.||+|++++.|++|+.++ |+|.
T Consensus 111 ~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g~v~ 189 (621)
T 2h88_A 111 ENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECR 189 (621)
T ss_dssp HHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETEEEEEEEEET-TEEE
T ss_pred HHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-CEEE
Confidence 99999999988898888889998443332 123388888888999999999999999999999999999999986 9999
Q ss_pred EEEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCCCccccccccccCCCCccccccc
Q psy9575 160 GVVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDMEFWQFHPTGVAGAGVLITEGVR 239 (786)
Q Consensus 160 G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~~~~~~~~~~~ 239 (786)
|+++.+..+|+...|+|++|||||||++++|..+++++.+||||++||+++||.+.+|||+||||+++...+++++++++
T Consensus 190 Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~me~~q~hPt~~~~~~~l~se~~r 269 (621)
T 2h88_A 190 GVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCR 269 (621)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCEEEEEEEETTTCCBCCTHHH
T ss_pred EEEEEEcCCCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCcccCcceeeecccccCCcceeccccc
Confidence 99998867888888999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred cCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCCCCCCCeEEEeCCCCChhHHHhHchhHHHHHHhhcC
Q psy9575 240 GEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGCGPNKDHVMLDLRHINSETIINRLPSILEIGNKFAN 319 (786)
Q Consensus 240 ~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~~~~~~~v~ld~~~~~~~~~~~~~~~~~~~~~~~~g 319 (786)
++|++|+|.+|+|||++|+|..+++++||+++++|..++.+|+++.|..++||+|+++++++.+.+++|.+++.+..+.|
T Consensus 270 g~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~e~~~g~g~~~~~~~v~ld~~~l~~~~l~~~~~~i~~~~~~~~G 349 (621)
T 2h88_A 270 GEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLATRLPGISETAMIFAG 349 (621)
T ss_dssp HTTCEEECTTCCCTHHHHSTTTGGGSCHHHHHHHHHHHHHTTCCBTTTTCBEEEECTTSCHHHHHHHCHHHHHHHHHHHC
T ss_pred CCccEEECCCCCCcccccCcccccccchHHHHHHHHHHHHhcCCcccCCCeEEEEcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999888999999999999999999888656667899999999999999999999999987669
Q ss_pred CCCCCCCeeeeecccccccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHH
Q psy9575 320 VNALKEPIPVIPTIHYQMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHIL 399 (786)
Q Consensus 320 ~d~~~~~i~v~p~~~~t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa 399 (786)
+|+.++|+||.|++|||||||+||.++|||+.+....|+|||||||||++|+|+||+|||||+||++|+|||++||++|+
T Consensus 350 ~D~~~~pi~v~p~~h~tmGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa 429 (621)
T 2h88_A 350 VDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIA 429 (621)
T ss_dssp CCTTTSCEEEEEEEEEESCBEEBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeecccccCcEeECCCCeEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999983222239999999999999789999999999999999999999999999
Q ss_pred HHhhhccCCCCCCcccHHHHHHHHhhhhhCCCCCCHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHHHhcccccc
Q psy9575 400 SLELKKIHNKKLPINSIDIIIDRLSKLENNKGSESVQSVANDIRKTMQNYCGVFRTDKLMKNGYKKIMILDERRKYISFK 479 (786)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~l~~l~~l~~~~~~~~~~ 479 (786)
++++......+++.+..+...+++..+++.+++.++.+++.+||++||+|+|++|++++|++++++|++|+++++.+.+.
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~ 509 (621)
T 2h88_A 430 ETCKPGEPVPSIKPNAGEESVANLDKLRFADGTIRTSEARLNMQKTMQSHAAVFRTGSILQEGCEKLSQIYRDLAHLKTF 509 (621)
T ss_dssp HHCCTTCCCCCCCTTTTHHHHHHHHHHHTCBSSEEHHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHHHHHHHGGGGEECC
T ss_pred HhhhccccccccchhHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHhhhceeEecCHHHHHHHHHHHHHHHHHHhhcccc
Confidence 98754322233333444555667777777666788999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCCcccccCCCCCCCcc-----------------cccceEEEEec-
Q psy9575 480 DKSKIFNTARIEALELDNLIETAKATISSAISRKESRGAHAHNDFKNRDDI-----------------NWLKHSIWYSN- 541 (786)
Q Consensus 480 ~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESRG~h~R~D~p~~d~~-----------------~~~~~~~~~~~- 541 (786)
|.+..||++|.+++|++||+++|+++++|||+|+||||+|||+|||++||+ +|+||++++..
T Consensus 510 ~~~~~~n~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~H~R~D~p~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (621)
T 2h88_A 510 DRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDV 589 (621)
T ss_dssp CCCSTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCCSSCTTSCCTTCCCCCGGGCCCEEEEEEEET
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHhCcccccceecccCcccCccccccCCcccccCCcchhccceeEEEEEcC
Confidence 888889999999999999999999999999999999999999999999999 99999988752
Q ss_pred ---CceeeeccCcCCCCc---ccccCCCCcCC
Q psy9575 542 ---GNRIEFKPVNLKPLT---VKTVHPKKHHD 567 (786)
Q Consensus 542 ---~~~~~~~~~~~~~~~---v~~~~p~~r~~ 567 (786)
++++.++||...+|+ +.+|+|..|.|
T Consensus 590 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~r~y 621 (621)
T 2h88_A 590 KSGKVTLKYRPVIDRTLNEEDCSSVPPAIRSY 621 (621)
T ss_dssp TTTEEEEEEEECCCCCSCTTTSCCCCCCCCCC
T ss_pred CCCceEEEecccccccccccccceeCCcCCCC
Confidence 258999999977875 78899988765
No 2
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=100.00 E-value=3.9e-95 Score=843.93 Aligned_cols=547 Identities=35% Similarity=0.566 Sum_probs=492.4
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCC---CCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMS---KDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVV 77 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~---~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i 77 (786)
|+||++|+++|++|+||||....+|+|.+++||+++...+.. +|+++.|+.|+++.+.+++|+++++.+++++++.+
T Consensus 18 L~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d~~~v~~~~~~s~~~i 97 (660)
T 2bs2_A 18 LRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCDQKVARMFVNTAPKAI 97 (660)
T ss_dssp HHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 589999999999999999998888999999999998776532 68999999999999999999999999999999999
Q ss_pred HHHHHcCCCccccCCCc---------------------ccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhc
Q psy9575 78 YELEHFGMPFDRNKNGT---------------------IYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLH 136 (786)
Q Consensus 78 ~~l~~~Gv~~~~~~~g~---------------------~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~ 136 (786)
+||+++|++|.+..+|. +..+.+|+| +.+|.++..+.+|..++..|.+.+++
T Consensus 98 ~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~-------~~~R~~~~~d~tG~~l~~~L~~~a~~ 170 (660)
T 2bs2_A 98 RELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGT-------KKWRTCYTADATGHTMLFAVANECLK 170 (660)
T ss_dssp HHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTC-------SSCCEECSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCceecCCCcccccccccccccccchhhhhhhcccccccc-------ccceeEeeCCCCHHHHHHHHHHHHHh
Confidence 99999999998876665 555667777 88999988888999999999999999
Q ss_pred CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCC-Ccc
Q psy9575 137 AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGL-PLE 215 (786)
Q Consensus 137 ~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa-~l~ 215 (786)
.||+|++++.|++|+.++ |+|+|+++.+..+|+...|+|++|||||||++++|..+++++.+||||+.||+++|| .+.
T Consensus 171 ~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~tGdG~~mA~~aGa~~l~ 249 (660)
T 2bs2_A 171 LGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALETGIAQLG 249 (660)
T ss_dssp HTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTSSSCEE
T ss_pred CCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcchhhcCCCCCCCCcccHHHHHHHHcCCChhc
Confidence 999999999999999986 899999998877888888999999999999999999999999999999999999999 999
Q ss_pred CCCccccccccccCCCCccccccccCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCC-CCCCCeEEEe
Q psy9575 216 DMEFWQFHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGC-GPNKDHVMLD 294 (786)
Q Consensus 216 ~~e~~q~~p~~~~~~~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~-~~~~~~v~ld 294 (786)
||||+||||+++.+.+++++++++++|++++|.+|+|||++|+|..+++++||+++++|..++.+|+++ .|...++|+|
T Consensus 250 ~me~~q~hPt~~~~~~~l~se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~~~~~g~g~~~~~~~~v~ld 329 (660)
T 2bs2_A 250 NMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVQSPYGQHLWLD 329 (660)
T ss_dssp CTTCEEEESCBBTTTCCBCCTHHHHHTCEEECTTCCBCHHHHCTTTGGGSCHHHHHHHHHHHHHTTTSBCCTTCCBEEEE
T ss_pred CchhheecccccCCCcceecccccCCCcEEECCCCCCcCcccCcccccccchHHHHHHHHHHHHhcCCccCCCCCEEEEE
Confidence 999999999999888889999999999999999999999999998779999999999999999998875 2445689999
Q ss_pred CCCCChhHHHhHchhHHHHHHhhcCCCCCCCCeeeeecccccccCcccCCCCcccccCCCCCcccCceeeecccCCccCC
Q psy9575 295 LRHINSETIINRLPSILEIGNKFANVNALKEPIPVIPTIHYQMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVH 374 (786)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~i~v~p~~~~t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~ 374 (786)
+++++++.+..++|++.+++.++.|+||.++|+||.|++|||||||+||.++| |+|||||||||++|+++|
T Consensus 330 ~~~~~~~~~~~~~p~i~e~~~~~~GiD~~~~~ipv~p~~hyt~GGi~vd~~~~---------v~IpGLYAaGE~a~~g~h 400 (660)
T 2bs2_A 330 ISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGE---------AKLKGLFSAGEAACWDMH 400 (660)
T ss_dssp CGGGCHHHHHHHSHHHHHHHHHTSCCCTTTSCEEECCEEEEECCEEECCTTSB---------CSSBTEEECGGGEECCSS
T ss_pred CCCCCHHHHHHHhHHHHHHHHHhcCCCCcccceEeeeeeeeccceEEECCCCc---------eecCCEEecccccccccc
Confidence 99999999999999999999986799999999999999999999999999999 899999999999888999
Q ss_pred CCCccChhhhHHHHHHHHHHHHHHHHHhhhccCC--CCCCcccHHHHHHHHhhhhhCCCCCCHHHHHHHHHHHHHhcccc
Q psy9575 375 GANRLGTNSLLDLLVFGRSAGNHILSLELKKIHN--KKLPINSIDIIIDRLSKLENNKGSESVQSVANDIRKTMQNYCGV 452 (786)
Q Consensus 375 Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~ 452 (786)
|+||+||+||++|+|||++||++|+++++..... .+...+..+...+++..++..+++.++.+++.+||++||+|+||
T Consensus 401 GanrlggnsL~~~~vfGr~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi 480 (660)
T 2bs2_A 401 GFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMKDVMDDNVGI 480 (660)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCBCHHHHHHHHHHHHHHHSSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCcccccccchhHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHhcCce
Confidence 9999999999999999999999999998532100 00111122333455666666666788999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHHhccccccCCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCCcccccCCCCCCCcccc
Q psy9575 453 FRTDKLMKNGYKKIMILDERRKYISFKDKSKIFNTARIEALELDNLIETAKATISSAISRKESRGAHAHNDFKNRDDINW 532 (786)
Q Consensus 453 ~r~~~~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESRG~h~R~D~p~~d~~~~ 532 (786)
+|++++|++|+++|++|++++..+.+.|.+..||++|.+++|++||+++|+++++|||+|+||||+|||+|||++||++|
T Consensus 481 ~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~Al~R~ESRG~H~R~D~p~~dd~~~ 560 (660)
T 2bs2_A 481 FRDGPHLEKAVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPKRDDINW 560 (660)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHTTBCCSCCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTBCSEETTTC
T ss_pred ecCHHHHHHHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeecccCcccCchhh
Confidence 99999999999999999999988999998889999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEec-----CceeeeccCcCCCCccc--ccCCCCcCCCC
Q psy9575 533 LKHSIWYSN-----GNRIEFKPVNLKPLTVK--TVHPKKHHDIK 569 (786)
Q Consensus 533 ~~~~~~~~~-----~~~~~~~~~~~~~~~v~--~~~p~~r~~~~ 569 (786)
++|++++.+ +++++++||+ +. +|+|..|.|..
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~y~~ 599 (660)
T 2bs2_A 561 LNRTLASWPNPEQTLPTLEYEALD-----VNEMEIAPGYRGYGA 599 (660)
T ss_dssp CEEEEEECCSTTCSSCEEEEEECC-----GGGCSSCSCCCSSSC
T ss_pred ceEEEEEecCCCCCcceEEEeecc-----ccccccCCccccccc
Confidence 999987654 2489999999 45 79999988854
No 3
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=100.00 E-value=1.1e-94 Score=835.41 Aligned_cols=564 Identities=54% Similarity=0.929 Sum_probs=498.9
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||++|+++|++|+||||....+|+|.+++||+.+.......|+++.|+.++++.+.+++++++++.+++++++.++||
T Consensus 20 l~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~~~~~~~~i~~l 99 (588)
T 2wdq_A 20 MRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILEL 99 (588)
T ss_dssp HHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHhHHHHHHHH
Confidence 58999999999999999999888788999999998876553468899999999999999999999999999999999999
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILG 160 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G 160 (786)
.++|++|.+..+|++....+++|...++....+|.++..+.+|..++..|.+.+++.||+|++++.|++|+.+++++|+|
T Consensus 100 ~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~G 179 (588)
T 2wdq_A 100 EHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVG 179 (588)
T ss_dssp HHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEE
T ss_pred HHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEE
Confidence 99999999888888877778888333322237888888888999999999999999999999999999999963389999
Q ss_pred EEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCCCccccccccccCCCCcccccccc
Q psy9575 161 VVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDMEFWQFHPTGVAGAGVLITEGVRG 240 (786)
Q Consensus 161 ~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~~~~~~~~~~~~ 240 (786)
+.+.+..+|+...|+|++|||||||++++|..+++++.+||||+.||+++||.+.+|||+||||+++.+.+.++++++++
T Consensus 180 v~~~~~~~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~me~~q~hpt~~~~~~~l~~e~~rg 259 (588)
T 2wdq_A 180 CTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRG 259 (588)
T ss_dssp EEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCEEEEEEEETTTCCBCCTHHHH
T ss_pred EEEEEcCCCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeChhHhheecceecCCcceeeehhcc
Confidence 99987667887789999999999999999999999999999999999999999999999999999998888889999999
Q ss_pred CCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCC-CCCCCeEEEeCCCCChhHHHhHchhHHHHHHhhcC
Q psy9575 241 EGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGC-GPNKDHVMLDLRHINSETIINRLPSILEIGNKFAN 319 (786)
Q Consensus 241 ~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~-~~~~~~v~ld~~~~~~~~~~~~~~~~~~~~~~~~g 319 (786)
+|+++||.+|+|||++|+|..+++++||+++++|+.++.+++++ .|...++|+|+++++++.+..++|++.+++.+..|
T Consensus 260 ~g~ilvn~~G~RF~~~~~~~~~el~~rd~v~~ai~~~~~~~~~~~~~~~~~v~ld~~~~~~~~~~~~~~~i~e~~~~~~G 339 (588)
T 2wdq_A 260 EGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAH 339 (588)
T ss_dssp TTCEEECTTCCCTHHHHCTTTGGGSCHHHHHHHHHHHHHTTCSBCSTTCSBEEEECGGGHHHHHHHHCHHHHHHHHHHTC
T ss_pred CCcEEECCCCCCCccccCcccchhccHHHHHHHHHHHHHhCCCccCCCCCeEEEecccCCHHHHHHHhhHHHHHHHHhCC
Confidence 99999999999999999998789999999999999999998774 23446799999999999999999999999998559
Q ss_pred CCCCCCCeeeeecccccccCcccCCCCccccc----CCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHH
Q psy9575 320 VNALKEPIPVIPTIHYQMGGIPTNIYGQVIIP----NNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAG 395 (786)
Q Consensus 320 ~d~~~~~i~v~p~~~~t~GGi~vd~~~~vl~~----~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag 395 (786)
+||.++|+||.|++|||||||+||.++||++. ++ ++|||||||||++|+|+||+||+||+||++|+|||++||
T Consensus 340 iD~~~~~i~v~p~~h~t~GGi~vd~~~~vl~~~~~~~g---~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag 416 (588)
T 2wdq_A 340 VDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGED---VVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAG 416 (588)
T ss_dssp CCTTTSCEEEEEEEEEECCBEEBCTTCEEEEECTTSCE---EEEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEeccccccCceEEECCCCCCcccccccCC---CeeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999987 45 799999999999878999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCcccHHHHHHHHhhhhhCCCCCCHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHHHhcc
Q psy9575 396 NHILSLELKKIHNKKLPINSIDIIIDRLSKLENNKGSESVQSVANDIRKTMQNYCGVFRTDKLMKNGYKKIMILDERRKY 475 (786)
Q Consensus 396 ~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~l~~l~~l~~~~~~ 475 (786)
++|+++++......+++...++...+++..++..+++.++.+++.+||++||+|+||+|++++|++++++|+.|++++..
T Consensus 417 ~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~ 496 (588)
T 2wdq_A 417 LHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKN 496 (588)
T ss_dssp HTHHHHHHHHCCCCCCCHHHHHHTTHHHHHHHHCCSSBCHHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhhccCcccccchhhhhhHHHHHHHhhccCCCcCHHHHHHHHHHHHhhcCcEecCHHHHHHHHHHHHHHHHHHhh
Confidence 99999885532222233333333334555555555567899999999999999999999999999999999999998988
Q ss_pred ccccCCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCCcccccCCCCCCCcccccceEEEEecCceeeeccCcCCCC
Q psy9575 476 ISFKDKSKIFNTARIEALELDNLIETAKATISSAISRKESRGAHAHNDFKNRDDINWLKHSIWYSNGNRIEFKPVNLKPL 555 (786)
Q Consensus 476 ~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESRG~h~R~D~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (786)
+.+.|.+..||++|.+++|++||+++|+++++|||+|+||||+|||+|||++||++|++|++.+.+++++.++||.+-+.
T Consensus 497 ~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~p~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 576 (588)
T 2wdq_A 497 ARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPK 576 (588)
T ss_dssp BCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBSSSCSCCHHHHSSEEEEETTTTEEEEECCCCCCS
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhCccceeeeecccCCccChhhhheeEEEECCCceEEEeeccCccc
Confidence 88988888899999999999999999999999999999999999999999999999999998874456899999884333
Q ss_pred cccccCCCCcCC
Q psy9575 556 TVKTVHPKKHHD 567 (786)
Q Consensus 556 ~v~~~~p~~r~~ 567 (786)
++.+|+|.+|.|
T Consensus 577 ~~~~~~~~~r~y 588 (588)
T 2wdq_A 577 LRPAFPPKIRTY 588 (588)
T ss_dssp SSCCCCCCCCCC
T ss_pred cccccCCCCCCC
Confidence 466788887764
No 4
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=100.00 E-value=2.8e-91 Score=808.14 Aligned_cols=540 Identities=41% Similarity=0.724 Sum_probs=487.1
Q ss_pred ChHhhhcHhCC--CCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEG--LNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVY 78 (786)
Q Consensus 1 L~AA~~aa~~G--~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~ 78 (786)
|+||+.|++.| ++|+||||....+++|.+++||+++...+ .|+++.|+.|+++.+.+++++++++.+++++++.++
T Consensus 18 l~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~--~ds~~~~~~d~~~~g~~~~d~~~v~~~~~~~~~~i~ 95 (602)
T 1kf6_A 18 LRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQD--HDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMT 95 (602)
T ss_dssp HHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCST--TCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCC--CCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 57999999999 99999999988778899999999987765 799999999999999999999999999999999999
Q ss_pred HHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCC-ceEEeceEEEeeeecCCCC
Q psy9575 79 ELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAK-TNFFIEWMAIDLISDSEGD 157 (786)
Q Consensus 79 ~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~G-v~i~~~~~v~~L~~~~~g~ 157 (786)
||.++|++|++..+|.++.+.+++| +.+|.++..+.+|..++..|.+.+++.| |+|++++.|++|+.++ ++
T Consensus 96 ~L~~~Gv~f~~~~~g~~~~~~~gg~-------~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~ 167 (602)
T 1kf6_A 96 QLELWGCPWSRRPDGSVNVRRFGGM-------KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GH 167 (602)
T ss_dssp HHHHTTCCCCBCTTSSBCCBCCTTC-------SSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TE
T ss_pred HHHHcCCCcccCCCCcccccccCCc-------cCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CE
Confidence 9999999999988888877788888 8899999888899999999999999888 9999999999999986 89
Q ss_pred EEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCCCccccccccccCCCCccccc
Q psy9575 158 ILGVVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDMEFWQFHPTGVAGAGVLITEG 237 (786)
Q Consensus 158 v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~~~~~~~~~ 237 (786)
|+|+.+.+..+|+...|+|+.||+||||++.+|..+++++.+||||+.||+++|+.+.+|||+||||+++.+.+++++++
T Consensus 168 v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e~~qfhPt~~~~~~~l~~e~ 247 (602)
T 1kf6_A 168 VRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGSGILMTEG 247 (602)
T ss_dssp EEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTTCEEEEEEECTTTCCBCCTH
T ss_pred EEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChhHhhccccccCCCcceechh
Confidence 99999887678887789999999999999999999999999999999999999999999999999999998888999999
Q ss_pred cccCCcEEEcCCCCccccccC---------CccC--CCCchhHHHHHHHHHHHhcCCC-CCCCCeEEEeCCCCChhHHHh
Q psy9575 238 VRGEGGILINSNGERFMERYA---------PILK--DLAPRDFVSRAMDQEIKEGRGC-GPNKDHVMLDLRHINSETIIN 305 (786)
Q Consensus 238 ~~~~g~~~vn~~G~rf~~~~~---------p~~~--~~~~~~~~~~~i~~~~~~g~g~-~~~~~~v~ld~~~~~~~~~~~ 305 (786)
++++|++++|.+|+|||++|+ |..+ ++++||++++++..++.+|+++ .|..++||+|+++++++.+.+
T Consensus 248 ~rg~g~~lvn~~G~RF~~~y~~~~~~~~~~p~~~~~el~~rd~v~~ai~~~~~~g~g~~~~~~~~v~ld~~~~~~~~l~~ 327 (602)
T 1kf6_A 248 CRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHE 327 (602)
T ss_dssp HHHTTCEEECTTCCCGGGGTTTCSCCCSSCCCTTSGGGSCHHHHHHHHHHHHHHTCSBCCTTCCBEEEECGGGCHHHHHH
T ss_pred hcCCceEEECCCCCCccccccccccccccCCcccccccccHHHHHHHHHHHHHhcCCccCCCCcEEEeecccCCHHHHHH
Confidence 999999999999999999998 7666 8999999999999999998763 344567999999999999999
Q ss_pred HchhHHHHHHhhcCCCCCCCCeeeeecccccccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhH
Q psy9575 306 RLPSILEIGNKFANVNALKEPIPVIPTIHYQMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLL 385 (786)
Q Consensus 306 ~~~~~~~~~~~~~g~d~~~~~i~v~p~~~~t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~ 385 (786)
++|.+++++.++.|+||.++|+||.|+.|||||||+||.++| |+|||||||||++|+|+||+|||||+||+
T Consensus 328 ~~~~~~~~~~~~~G~D~~~~pi~v~p~~h~t~GGi~vd~~~~---------~~IpGLyAaGe~a~~g~hGanrl~gnsl~ 398 (602)
T 1kf6_A 328 RLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCE---------TRIKGLFAVGECSSVGLHGANRLGSNSLA 398 (602)
T ss_dssp HCHHHHHHHHHHHCCCTTTSCEEEEEEEEEECCEEECCTTSB---------CSSBTEEECGGGEECSSSTTSCCTTHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcCceEEehhheeeCCeEEECCCCc---------cccCCEEEccccccccccCCCCCccHHHH
Confidence 999999999886799999999999999999999999999999 89999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCc----ccHHHHHHHHhhhhhCCCCCCHHHHHHHHHHHHHhccccccCHHHHHH
Q psy9575 386 DLLVFGRSAGNHILSLELKKIHNKKLPI----NSIDIIIDRLSKLENNKGSESVQSVANDIRKTMQNYCGVFRTDKLMKN 461 (786)
Q Consensus 386 ~a~v~G~~Ag~~aa~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~ 461 (786)
+|+|||++||++|++++.... +.+. ..++....++..++..++..++.+++.+||++||+|+||+|++++|++
T Consensus 399 ~~~vfGr~Ag~~aa~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~ 475 (602)
T 1kf6_A 399 ELVVFGRLAGEQATERAATAG---NGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQK 475 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC---CCCHHHHHHHHHHHHHHHHHHHHCCCCBCHHHHHHHHHHHHHHHSSSSBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccC---CCCcchhhhhhHHHHHHHhhhhccCCCcCHHHHHHHHHHHHHhcCCeecCHHHHHH
Confidence 999999999999999874321 1221 122233344555555666788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCCcccccCC--CCCCCcccccceEEEE
Q psy9575 462 GYKKIMILDERRKYISFKDKSKIFNTARIEALELDNLIETAKATISSAISRKESRGAHAHND--FKNRDDINWLKHSIWY 539 (786)
Q Consensus 462 ~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESRG~h~R~D--~p~~d~~~~~~~~~~~ 539 (786)
++++|+.|++++..+.+.|.+..||++|.+++|++||+++|+++++|||+|+||||+|||+| ||++||++|+++++++
T Consensus 476 a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~~~p~~d~~~~~~~~~~~ 555 (602)
T 1kf6_A 476 TIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAF 555 (602)
T ss_dssp HHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBCSTTCSSCCTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCcCccceEEecccCCCccCchhhheEEEEE
Confidence 99999999999988888888888999999999999999999999999999999999999999 9999999999999887
Q ss_pred ecC---ceeeeccCcCCCCcccccCCCCcCC
Q psy9575 540 SNG---NRIEFKPVNLKPLTVKTVHPKKHHD 567 (786)
Q Consensus 540 ~~~---~~~~~~~~~~~~~~v~~~~p~~r~~ 567 (786)
.++ +.+.++|+. +.+++|..|.|
T Consensus 556 ~~~~~~~~~~~~~~~-----~~~~~~~~r~y 581 (602)
T 1kf6_A 556 RDADGTTRLEYSDVK-----ITTLPPAKRVY 581 (602)
T ss_dssp ECTTSCEEEEEEECC-----CSSCCCC----
T ss_pred EcCCCCceEEEeecc-----ccccCCcCccc
Confidence 643 578899998 56789988776
No 5
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=100.00 E-value=9e-86 Score=754.03 Aligned_cols=498 Identities=33% Similarity=0.464 Sum_probs=390.5
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||++|++ |++|+||||....+|+|.+++||+++..+. .|+++.|+.++++.+.+++++++++.+++++++.++||
T Consensus 21 l~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~--~ds~~~~~~d~l~~g~g~~d~~~v~~~~~~~~~~i~~l 97 (540)
T 1chu_A 21 LSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDE--TDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWL 97 (540)
T ss_dssp HHHHHHHTT-TSCEEEECSSCTTC-------------CCS--HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCC--CCCHHHHHHHHHHhhcccCCHHHHHHHHHhHHHHHHHH
Confidence 589999999 999999999998888999999999987765 68899999999999999999999999999999999999
Q ss_pred HHcCCCccccC----CCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhc-CCceEEeceEEEeeeecCC
Q psy9575 81 EHFGMPFDRNK----NGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLH-AKTNFFIEWMAIDLISDSE 155 (786)
Q Consensus 81 ~~~Gv~~~~~~----~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~-~Gv~i~~~~~v~~L~~~~~ 155 (786)
.++|++|.+.. +|.+....+++| +.+|.++..+.+|..++..|.+.+++ .||+|++++.|++|+.+++
T Consensus 98 ~~~Gv~f~~~~~~~~~g~~~~~~~gg~-------~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~ 170 (540)
T 1chu_A 98 IDQGVLFDTHIQPNGEESYHLTREGGH-------SHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDK 170 (540)
T ss_dssp HHTTCC---------------------------------------------CCCHHHHHHCTTEEEECSEEEEEEEEGGG
T ss_pred HHcCCCcccCcccCcCCcccccccccc-------ccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC
Confidence 99999998776 777777778888 77888888788899999999999998 6999999999999998322
Q ss_pred C------CEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCCCccccccccccC
Q psy9575 156 G------DILGVVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDMEFWQFHPTGVAG 229 (786)
Q Consensus 156 g------~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~ 229 (786)
+ +|+|+.+.+..+|+...|+|++|||||||++.+|..+++++.+||||++||+++||.+.+|||+||||+.+..
T Consensus 171 g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~l~~~e~~q~hpt~~~~ 250 (540)
T 1chu_A 171 IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYH 250 (540)
T ss_dssp TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCCEECTTCEEEEEEEECS
T ss_pred CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCCCcChHHHhhcCeeecC
Confidence 6 8999999876678877899999999999999999999999999999999999999999999999999998754
Q ss_pred ---CCCccccccccCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCCCCCCCeEEEeCCCCChhHHHhH
Q psy9575 230 ---AGVLITEGVRGEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGCGPNKDHVMLDLRHINSETIINR 306 (786)
Q Consensus 230 ---~~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~~~~~~~v~ld~~~~~~~~~~~~ 306 (786)
.+++++++++++|++++|.+|+|||++|+|.. +++|||+++++|+.++.++.. ..+|+|+++++++.+..+
T Consensus 251 ~~~~~~l~~e~~rg~g~~lvn~~G~RF~~~~~~~~-el~~rd~v~~ai~~~~~~~~~-----~~v~ld~~~~~~~~~~~~ 324 (540)
T 1chu_A 251 PQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERG-ELAPRDIVARAIDHEMKRLGA-----DCMFLDISHKPADFIRQH 324 (540)
T ss_dssp TTCTTCBCCHHHHHTTCEEECTTSCBCGGGTCTTG-GGSCHHHHHHHHHHHHHHHTC-----SCEEEECCSSCSHHHHHH
T ss_pred CCCCcceeehhhcCCceEEECCCCCCCcccCCccc-ccCcHHHHHHHHHHHHHhcCC-----ceEEEecccCCHHHHHHh
Confidence 46788899999999999999999999999965 999999999999999887532 249999999999999999
Q ss_pred chhHHHHHHhhcCCCCCCCCeeeeecccccccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHH
Q psy9575 307 LPSILEIGNKFANVNALKEPIPVIPTIHYQMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLD 386 (786)
Q Consensus 307 ~~~~~~~~~~~~g~d~~~~~i~v~p~~~~t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~ 386 (786)
+|++.+++.+ .|+|+.++|+||.|++|||||||+||.++| |+|||||||||++|+|+||+||+||+||++
T Consensus 325 ~~~i~~~~~~-~Gid~~~~~i~v~p~~h~t~GGi~vd~~~~---------t~I~GLyAaGE~a~~g~hGanrl~gnsl~~ 394 (540)
T 1chu_A 325 FPMIYEKLLG-LGIDLTQEPVPIVPAAHYTCGGVMVDDHGR---------TDVEGLYAIGEVSYTGLHGANRMASNSLLE 394 (540)
T ss_dssp CHHHHHHHHT-TTCCTTTSCEEEEEEEEEESCEEECCTTCB---------CSSBTEEECGGGEECSSSTTSCCTTHHHHH
T ss_pred hhhHHHHHHH-hCcCCCCCCeEeehHHheecCcEEECCCCC---------CccCCEEeccccccccccCCCcCcchhHHH
Confidence 9999999988 599999999999999999999999999999 999999999999988999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCcccHHHHHHHHhhhhhCCCCCCHHHHHHHHHHHHHhccccccCHHHHHHHHHHH
Q psy9575 387 LLVFGRSAGNHILSLELKKIHNKKLPINSIDIIIDRLSKLENNKGSESVQSVANDIRKTMQNYCGVFRTDKLMKNGYKKI 466 (786)
Q Consensus 387 a~v~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~l~~l 466 (786)
|+|||++||++|++++........++..... .+ ........+.+++++||++||+|+||+|++++|++++++|
T Consensus 395 ~~vfG~~Ag~~aa~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l 467 (540)
T 1chu_A 395 CLVYGWSAAEDITRRMPYAHDISTLPPWDES----RV---ENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRI 467 (540)
T ss_dssp HHHHHHHHHHHHHHHC---CCCCCBCCCCCC----CB---CCHHHHHHHHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccccchhhhhh----cc---cCcccccchHHHHHHHHHHHHHhhCcccCHHHHHHHHHHH
Confidence 9999999999999876432110111100000 00 0000012356778999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCCcccccCCCCCCCcccccceEEE
Q psy9575 467 MILDERRKYISFKDKSKIFNTARIEALELDNLIETAKATISSAISRKESRGAHAHNDFKNRDDINWLKHSIW 538 (786)
Q Consensus 467 ~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESRG~h~R~D~p~~d~~~~~~~~~~ 538 (786)
++|++++........ ...+++|++||+++|+++++|||+|+||||+|||+|||++||+ |+++++.
T Consensus 468 ~~l~~~~~~~~~~~~------~~~~~~e~~~~~~~a~~~~~~al~R~ESRG~h~r~D~p~~~~~-~~~~~~~ 532 (540)
T 1chu_A 468 TMLQQEIDEYYAHFR------VSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTH-SGPSILS 532 (540)
T ss_dssp HHHHHHHHHHHTTBC------CCHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTCCSCCSS-CCCCEEC
T ss_pred HHHHHHHHHHhhccc------ccHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccCCCcChh-hhceEEc
Confidence 999887642211100 1134689999999999999999999999999999999999985 9999876
No 6
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=100.00 E-value=5.3e-85 Score=758.09 Aligned_cols=514 Identities=19% Similarity=0.256 Sum_probs=437.6
Q ss_pred ChHhhhcHhC------CCCEEEEEecCCCCChhhhccc--CeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q psy9575 1 MRASLQLAQE------GLNVAILSKVFPTRSHTVAAQG--GISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKE 72 (786)
Q Consensus 1 L~AA~~aa~~------G~~V~vvek~~~~~g~s~~a~G--gi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~ 72 (786)
|+||++|+++ |++|+||||....++++ +++| |+++... .|+++.++.+++..+.+++++++++.++++
T Consensus 35 L~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s-~AqG~~gi~a~l~---~ds~e~~~~~~~~~~~gl~d~~~v~~l~~~ 110 (662)
T 3gyx_A 35 CGAAFEAVRWADKYAPEAKILLVDKASLERSGA-VAQGLSAINTYLG---DNNADDYVRMVRTDLMGLVREDLIYDLGRH 110 (662)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEECSSCTTTCST-TTTCEEEECCCCT---TSCHHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhccccCCCCcEEEEEecCCCCCcc-cccCcchheeecC---CCCHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 5899999997 99999999998876655 6788 7877664 689999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcccc-CCCccc----------ccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcC--Cc
Q psy9575 73 APKVVYELEHFGMPFDRN-KNGTIY----------QRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHA--KT 139 (786)
Q Consensus 73 ~~~~i~~l~~~Gv~~~~~-~~g~~~----------~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~--Gv 139 (786)
+++.++||+++|++|++. ++|.++ ....++| +.+|..+..+.+|..+...|.+++++. ||
T Consensus 111 a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~-------~~~r~~~~~~~~G~~i~~~L~~~a~~~~~gV 183 (662)
T 3gyx_A 111 VDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDK-------PVRSGRWQIMINGESYKVIVAEAAKNALGQD 183 (662)
T ss_dssp HHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCC-------BCCSSTTCEEEEETSHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCcc-------ccccceecccCCHHHHHHHHHHHHHhcCCCc
Confidence 999999999999999986 677654 2234555 666665545567888999999999987 99
Q ss_pred eEEeceEEEeeeecCC--CCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcc---------cCCCchHHHHHHH
Q psy9575 140 NFFIEWMAIDLISDSE--GDILGVVALEMETGNIMILESKITILATGGGGRIWAASTN---------AFINTGDGLGMAA 208 (786)
Q Consensus 140 ~i~~~~~v~~L~~~~~--g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~---------~~~~tGdg~~~a~ 208 (786)
+|++++.+++|+++++ |+|+|+++++..+|+...|+|++|||||||++++|.++++ ++.+||||++||+
T Consensus 184 ~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~~~~~~tGdG~~mA~ 263 (662)
T 3gyx_A 184 RIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAWYPVWNAGSTYTMCA 263 (662)
T ss_dssp TEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHHHHH
T ss_pred EEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccccccCcCCccccccccCCCCCcchHHHHHH
Confidence 9999999999999862 3999999998778888889999999999999999987554 7899999999999
Q ss_pred HCCCCccCCCccccccccccC----C--CCccccccccCCcEEEcCCCCccccccCCccC----------CCCchhHHHH
Q psy9575 209 RAGLPLEDMEFWQFHPTGVAG----A--GVLITEGVRGEGGILINSNGERFMERYAPILK----------DLAPRDFVSR 272 (786)
Q Consensus 209 ~aGa~l~~~e~~q~~p~~~~~----~--~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~----------~~~~~~~~~~ 272 (786)
++||.+.|||| |||||.+.. . ++++++ ++++|.+|+|||++|+|... +|+|||++++
T Consensus 264 ~aGA~l~~me~-QfhPt~~~~~~~p~~~~~Lise------~ilvn~~GeRFm~~~~p~~~~~~~~~y~~~eLapRDvvsr 336 (662)
T 3gyx_A 264 QVGAEMTMMEN-RFVPARFKDGYGPVGAWFLLFK------AKATNCKGEDYCATNRAMLKPYEERGYAKGHVIPTCLRNH 336 (662)
T ss_dssp TTTCEEECTTC-CBCCEEETTTCCCCHHHHHHHC------CCEECTTSCCHHHHTGGGGHHHHTTTSSTTTCCCHHHHTH
T ss_pred HhCCcccCCCe-eEeccccccCCCCCCceEEEee------eEEECCCCCEecCCcCchhhccccccccccccCchHHHHH
Confidence 99999999998 999998852 1 245554 69999999999999988754 7999999999
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCC--------CChhHH-----------HhHchhHHHHHHhhcCCCCCCCCeeeeecc
Q psy9575 273 AMDQEIKEGRGCGPNKDHVMLDLRH--------INSETI-----------INRLPSILEIGNKFANVNALKEPIPVIPTI 333 (786)
Q Consensus 273 ~i~~~~~~g~g~~~~~~~v~ld~~~--------~~~~~~-----------~~~~~~~~~~~~~~~g~d~~~~~i~v~p~~ 333 (786)
+|+.++++|++. ||||+++ ++++.+ .+++|.+.+.+.. .|+||.++||||.|++
T Consensus 337 ai~~e~~~G~g~------v~LD~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~i~~~~~~-~giD~~~~pipV~P~~ 409 (662)
T 3gyx_A 337 MMLREMREGRGP------IYMDTKTALQTSFATMSPAQQKHLEAEAWEDFLDMCVGQANLWAA-TNCAPEERGSEIMPTE 409 (662)
T ss_dssp HHHHHHHTTCCC------CEECHHHHHHHHTTTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTCCTTTCCEEEEECC
T ss_pred HHHHHHHcCCCc------EEEEccCcchhcccccCHHHHHhhhhhhHHHHHHhChHHHHHHHH-cCCCcccCceeeeecc
Confidence 999999999873 9999987 666544 3456777777766 6999999999999999
Q ss_pred cccccC------cccCCCCcccccC-----------CCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHH
Q psy9575 334 HYQMGG------IPTNIYGQVIIPN-----------NDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGN 396 (786)
Q Consensus 334 ~~t~GG------i~vd~~~~vl~~~-----------~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~ 396 (786)
||+||| |+||.+++|+.++ ...+|+|||||||||++|+++||+ ++|||.+ |++||.
T Consensus 410 Hy~mGG~~~~~Gi~vd~~~~~~~~~~~~~~~~~~~~~~~~t~v~gl~a~Ge~~~~~~hg~---~~~sl~~----g~~ag~ 482 (662)
T 3gyx_A 410 PYLLGSHSGCCGIWASGPDEAWVPEDYKVRAANGKVYNRMTTVEGLWTCADGVGASGHKF---SSGSHAE----GRIVGK 482 (662)
T ss_dssp CBBCSSSSCCCEECCCCCCCTTSCGGGCCCCTTSCCCTTBCSSBTEECCSSSBCSCCCCH---HHHHHHH----HHHHHH
T ss_pred ceecccccccCceeecCccccccccccccccccccccCCCCccCCeEeCccccccccCcc---HhHHHHH----HHHHHH
Confidence 999996 9999877765432 334699999999999998899996 7888877 888999
Q ss_pred HHHHHhhhccCCCCCCcccHHHHHHHHhhhhhC--------------CCCCCHHHHHHHHHHHHHhccc----cccCHH-
Q psy9575 397 HILSLELKKIHNKKLPINSIDIIIDRLSKLENN--------------KGSESVQSVANDIRKTMQNYCG----VFRTDK- 457 (786)
Q Consensus 397 ~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~m~~~~g----~~r~~~- 457 (786)
.|++|++......+...+.++...++++.++.. +++.++.+++++||++||+|+| ++|+++
T Consensus 483 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~~M~~~~g~~~~v~R~~~~ 562 (662)
T 3gyx_A 483 QMVRWYLDHKDFKPEFVETAEELKTLIYRPYYNYEKGKGASTCPVVNPEYISPKNFMMRLIKCTDEYGGGVGTYYNTSKA 562 (662)
T ss_dssp HHHHHHHHTCSCCCCCSSCHHHHHHHHTHHHHHHHHHGGGCSSSSSCSSSBCHHHHHHHHHHHHHHHTTCTTTTTEECHH
T ss_pred HHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHhhhhhccccccccccCCCCcCHHHHHHHHHHHHHHhcCCCccEEEcCHH
Confidence 999998765433344445566666666655442 2457899999999999999999 999987
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCC--cccccCCCCCCCcccccce
Q psy9575 458 LMKNGYKKIMILDERRKYISFKDKSKIFNTARIEALELDNLIETAKATISSAISRKESR--GAHAHNDFKNRDDINWLKH 535 (786)
Q Consensus 458 ~l~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESR--G~h~R~D~p~~d~~~~~~~ 535 (786)
+|++|+++|++|++++.++.+.|. |+|++++|++||+++|+++++|||+|+||| |+|||+|||++||++|+||
T Consensus 563 ~L~~al~~l~~l~~~~~~~~~~~~-----~~l~~~~E~~~~l~~a~~~~~~al~R~ESR~~G~H~R~D~P~~dd~~w~~~ 637 (662)
T 3gyx_A 563 LLDTGFWLMEMLEEDSLKLAARDL-----HELLRCWENYHRLWTVRLHMQHIAFREESRYPGFYYRADFLGLDDSKWKCF 637 (662)
T ss_dssp HHHHHHHHHHHHHHHGGGBCCSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSCCTTTCCSE
T ss_pred HHHHHHHHHHHHHHHHhcCcCCCh-----HHHHHHHHHHhHHHHHHHHHHHHHhCcccccccceecccCCccCccccceE
Confidence 999999999999999988888875 899999999999999999999999999999 9999999999999999999
Q ss_pred EEEEec----CceeeeccCc
Q psy9575 536 SIWYSN----GNRIEFKPVN 551 (786)
Q Consensus 536 ~~~~~~----~~~~~~~~~~ 551 (786)
++++++ +++++++||.
T Consensus 638 ~~~~~~~~~g~~~~~~~p~~ 657 (662)
T 3gyx_A 638 VNSKYDPAKKETKIFKKPYY 657 (662)
T ss_dssp EEEEEETTTTEEEEEEECCE
T ss_pred EEEEEcCCCCceEEEEeehh
Confidence 988764 2567777776
No 7
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=100.00 E-value=5.7e-73 Score=661.48 Aligned_cols=513 Identities=20% Similarity=0.278 Sum_probs=397.7
Q ss_pred ChHhhhcH---h-CCCCEEEEEecCCCCChhhhcccCeeec--cCCC----CCCCHHHHHHHHHHhcCCCCcHHHHHHHH
Q psy9575 1 MRASLQLA---Q-EGLNVAILSKVFPTRSHTVAAQGGISAS--LGNM----SKDNWHWHMFDTIKGSDYLGDQDAIEFMC 70 (786)
Q Consensus 1 L~AA~~aa---~-~G~~V~vvek~~~~~g~s~~a~Ggi~a~--~~~~----~~d~~~~~~~d~~~~~~~~~~~~~v~~~~ 70 (786)
|+||++|+ + .|++|+||||....++ +.+++|+.... ..+. ..|+++.|+.+++..+.+++++++++.++
T Consensus 35 l~AAl~aa~~~~~~G~~V~vlEK~~~~~s-~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~l~d~~~v~~~~ 113 (643)
T 1jnr_A 35 CGAAYEAAYWAKLGGLKVTLVEKAAVERS-GAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMMGLAREDLVADYA 113 (643)
T ss_dssp HHHHHHHHHHHTTTTCCEEEECSSCTTTC-STTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred HHHHHHHhhhhhhCCCeEEEEeCcCCCCC-cceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhcCcCcHHHHHHHH
Confidence 58999999 6 8999999999987554 34565554332 2111 15889999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcC-Cc-eEEeceEEE
Q psy9575 71 KEAPKVVYELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHA-KT-NFFIEWMAI 148 (786)
Q Consensus 71 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~-Gv-~i~~~~~v~ 148 (786)
+++++.++||+++|++|.+..+|.+..+ ++. . . . ..|..+.+.|.+.+++. || +|++++.|+
T Consensus 114 ~~~~~~i~~l~~~Gv~f~~~~~g~~~~~--~~~-------~---~-~---~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~ 177 (643)
T 1jnr_A 114 RHVDGTVHLFEKWGLPIWKTPDGKYVRE--GQW-------Q---I-M---IHGESYKPIIAEAAKMAVGEENIYERVFIF 177 (643)
T ss_dssp HHHHHHHHHHHHTTCCBCBCTTSCBCBS--SSS-------C---E-E---EEETTHHHHHHHHHHHHHCGGGEECSEEEE
T ss_pred HHHHHHHHHHHHcCCcceeCCCCCccCC--Ccc-------c---c-C---CCcHHHHHHHHHHHHhcCCCcEEEecCEEE
Confidence 9999999999999999987766654321 111 0 0 0 12445778888888887 99 999999999
Q ss_pred eeeecCCC---CEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCc---------ccCCCchHHHHHHHHCCCCccC
Q psy9575 149 DLISDSEG---DILGVVALEMETGNIMILESKITILATGGGGRIWAAST---------NAFINTGDGLGMAARAGLPLED 216 (786)
Q Consensus 149 ~L~~~~~g---~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~---------~~~~~tGdg~~~a~~aGa~l~~ 216 (786)
+|+.++ + +|+|+.+++..+|+...|+|++|||||||++.+|.+++ +++.+||||++||+++||.+.+
T Consensus 178 ~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~~~~~~~~~~~~~~~~~tGdG~~mA~~aGa~l~~ 256 (643)
T 1jnr_A 178 ELLKDN-NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKAGAMLTQ 256 (643)
T ss_dssp EEEECT-TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHHHHHHHTCCEES
T ss_pred EEEEcC-CccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccCcccccccccccCCCCCccHHHHHHHHhCCccCC
Confidence 999986 6 99999998877888778999999999999999987654 3788999999999999999999
Q ss_pred CCccccccccccCCCCccccccccCCcEEEcCCCCccccccCCccCCCC--------chhHHHHHHHHHHHhcCCCCCCC
Q psy9575 217 MEFWQFHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPILKDLA--------PRDFVSRAMDQEIKEGRGCGPNK 288 (786)
Q Consensus 217 ~e~~q~~p~~~~~~~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~~~~--------~~~~~~~~i~~~~~~g~g~~~~~ 288 (786)
||+ ||||+.+..............|++++|.+|+|||++|+|...+++ ++++++++|+.++.+|++ +
T Consensus 257 me~-qf~pt~~~~~~~~~~~~~l~~g~ilvn~~G~RF~~e~~~~~~~~~~~~~~~~~~rd~~~~~i~~e~~~g~g--~-- 331 (643)
T 1jnr_A 257 FEH-RFIPFRFKDGYGPVGAWFLFFKCKAKNAYGEEYIKTRAAELEKYKPYGAAQPIPTPLRNHQVMLEIMDGNQ--P-- 331 (643)
T ss_dssp TTC-CBCCEEETTTCCCCHHHHHTSCCCEECTTSCCHHHHTSGGGGGGTTGGGSSSCCHHHHHHHHHHHHHTTCC--C--
T ss_pred chh-eeecccccCCCCCcccceecccceEECCCCCchhhccchhhhhHhhhcccCCCCchhhHHHHHHHHhcCCC--C--
Confidence 997 999997753211001112345789999999999999887653232 588999999999998876 3
Q ss_pred CeEEEeCC---------------CCChhHHHhHc---hhHHHHHHhhcCCCCCCCCeeeeeccccccc------CcccCC
Q psy9575 289 DHVMLDLR---------------HINSETIINRL---PSILEIGNKFANVNALKEPIPVIPTIHYQMG------GIPTNI 344 (786)
Q Consensus 289 ~~v~ld~~---------------~~~~~~~~~~~---~~~~~~~~~~~g~d~~~~~i~v~p~~~~t~G------Gi~vd~ 344 (786)
+|+|.. +++++.++..+ +.....+.+ .|+|+.++|+||.|++||+|| ||+||.
T Consensus 332 --~~l~~~~~~~ela~~~gld~~~l~~~~~~~~l~~~~~~~~~~~~-~G~D~~~~~ipv~p~~hy~~G~~~t~gGi~~d~ 408 (643)
T 1jnr_A 332 --IYMHTEEALAELAGGDKKKLKHIYEEAFEDFLDMTVSQALLWAC-QNIDPQEQPSEAAPAEPYIMGSHSGEAGFWVCG 408 (643)
T ss_dssp --EEECHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTCCTTTSCEEEEECCCBBCSSSSCCCEECCCC
T ss_pred --ceeeecccHHHHHHHhccChhhhhHHHHHHHHHHhHHHHHHHHh-cCCCcccCcccccCCCCccccccccccceeecC
Confidence 888743 33333232222 333333333 599999999999999999999 899999
Q ss_pred CCcccccC--------CCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhccCCCCCCcccH
Q psy9575 345 YGQVIIPN--------NDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKKIHNKKLPINSI 416 (786)
Q Consensus 345 ~~~vl~~~--------~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~~~~~~~~~~~~ 416 (786)
++|||+.+ ....|+|||||||||++|+++ ||++|+||.+ |++||++||+++.......+++.+.+
T Consensus 409 ~~~vl~~~~~~~v~~~~~~~t~I~GLyAaGe~a~~~~---~r~~~~sl~~----G~~ag~~aa~~~~~~~~~~~~~~~~~ 481 (643)
T 1jnr_A 409 PEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANP---HKFSSGSFTE----GRIAAKAAVRFILEQKPNPEIDDAVV 481 (643)
T ss_dssp CTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCC---CCHHHHHHHH----HHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_pred ccccccccccccccccccCCceeCCEEeeeccccccc---cccchhHHHH----HHHHHHHHHHHHhccCCCCCCCHHHH
Confidence 99998764 223599999999999996553 6788886665 99999999998865432223333333
Q ss_pred HHHHHHHhhh----hh----------CCCCCCHHHHHHHHHHHHHhccc----cccCHH-HHHHHHHHHHHHHHHhcccc
Q psy9575 417 DIIIDRLSKL----EN----------NKGSESVQSVANDIRKTMQNYCG----VFRTDK-LMKNGYKKIMILDERRKYIS 477 (786)
Q Consensus 417 ~~~~~~~~~~----~~----------~~~~~~~~~~~~~l~~~m~~~~g----~~r~~~-~l~~~l~~l~~l~~~~~~~~ 477 (786)
+...+....+ .. .....++.+++.+||++||+|+| ++|+.+ +|++|+++|+.|+++++.+.
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~M~~~~g~i~~~~R~~~~~L~~al~~l~~l~~~~~~~~ 561 (643)
T 1jnr_A 482 EELKKKAYAPMERFMQYKDLSTADDVNPEYILPWQGLVRLQKIMDEYAAGIATIYKTNEKMLQRALELLAFLKEDLEKLA 561 (643)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCSSTTCCTTCBCHHHHHHHHHHHHHHHTTCGGGTTEECHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHhHHHHhhhccccccccccCcCCCCHHHHHHHHHHHHHHHhCCCcceeecCHHHHHHHHHHHHHHHHHHHhcc
Confidence 3222222111 11 11246789999999999999999 568755 99999999999998888777
Q ss_pred ccCCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCC--cccccCCCCCCCcccccceEEEEec--C--ceeeeccCc
Q psy9575 478 FKDKSKIFNTARIEALELDNLIETAKATISSAISRKESR--GAHAHNDFKNRDDINWLKHSIWYSN--G--NRIEFKPVN 551 (786)
Q Consensus 478 ~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESR--G~h~R~D~p~~d~~~~~~~~~~~~~--~--~~~~~~~~~ 551 (786)
+.|. ++|.+++|++||+++|+++++|||+|+||| |+|||+|||++||++|+++++++++ + ++++++||.
T Consensus 562 ~~~~-----~~l~~~~e~~n~l~~a~~i~~aAl~R~ESR~~G~H~R~D~P~~d~~~~~~~~~~~~~~~~~~~~~~~~pv~ 636 (643)
T 1jnr_A 562 ARDL-----HELMRAWELVHRVWTAEAHVRHMLFRKETRWPGYYYRTDYPELNDEEWKCFVCSKYDAEKDEWTFEKVPYV 636 (643)
T ss_dssp CSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSCCTTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCCH-----HHHHHHHHHHHHHHHHHHHHHHHHhccccccCCceecccCCccChHHHHHHHhhhcccCCCceEEEEeecc
Confidence 7765 899999999999999999999999999999 9999999999999999999988762 2 578888877
No 8
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=100.00 E-value=3.4e-72 Score=632.89 Aligned_cols=457 Identities=31% Similarity=0.456 Sum_probs=396.4
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||+.|++.|++|+||||. ..+|+|.+++||+.+..+. .|+++.|+.++++.+.+++++++++.+++++++.++||
T Consensus 12 l~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~--~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~~~~~i~~l 88 (472)
T 2e5v_A 12 LSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGS--DDSPELHAQDTIRVGDGLCDVKTVNYVTSEAKNVIETF 88 (472)
T ss_dssp HHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCST--TCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCC--CCCHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999 6778899999999988776 79999999999999999999999999999999999999
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILG 160 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G 160 (786)
.++|++|++. ...+++| +.+|..+..+.+|..+...|.+.+++.||++++++.+ +|+.++ ++|.|
T Consensus 89 ~~~Gv~~~~~------~~~~~g~-------~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~~v~G 153 (472)
T 2e5v_A 89 ESWGFEFEED------LRLEGGH-------TKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKD-GKVTG 153 (472)
T ss_dssp HHTTCCCCSS------CBCCTTC-------SSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEET-TEEEE
T ss_pred HHcCCCCCcc------cccccCc-------CcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-CEEEE
Confidence 9999999753 3456677 7788888888899999999999998889999999999 999886 89999
Q ss_pred EEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCCCccccccccccC--CCCcccccc
Q psy9575 161 VVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDMEFWQFHPTGVAG--AGVLITEGV 238 (786)
Q Consensus 161 ~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~--~~~~~~~~~ 238 (786)
+.+.+ .+| .+.|+.||+||||++.+|..++++..++|||+.||+++|+.+.+|||+||||+.+.. .++++++++
T Consensus 154 v~v~~-~~g---~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg~~~~ae~~ 229 (472)
T 2e5v_A 154 FVTEK-RGL---VEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGEVFLLTETL 229 (472)
T ss_dssp EEETT-TEE---ECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGCCEECCTHH
T ss_pred EEEEe-CCC---eEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCCceeeehhh
Confidence 87743 334 367999999999999999888899999999999999999999999999999986532 266788889
Q ss_pred ccCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCCCCCCCeEEEeCCCCChhHHHhHchhHHHHHHhhc
Q psy9575 239 RGEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGCGPNKDHVMLDLRHINSETIINRLPSILEIGNKFA 318 (786)
Q Consensus 239 ~~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~~~~~~~v~ld~~~~~~~~~~~~~~~~~~~~~~~~ 318 (786)
++.|++++|.+|+||+++|+|.. ++.+++++++++..++.++.. +|+|.++++. +..++|.+...+.. .
T Consensus 230 ~~~G~~~v~~~g~rf~~~~~~~~-el~~rd~v~~~i~~~~~~~~~-------v~ld~~~~~~--~~~~~~~~~~~~~~-~ 298 (472)
T 2e5v_A 230 RGEGAQIINENGERFLFNYDKRG-ELAPRDILSRAIYIEMLKGHK-------VFIDLSKIED--FERKFPVVAKYLAR-H 298 (472)
T ss_dssp HHTTCEEEETTCCCGGGGTCTTG-GGSCHHHHHHHHHHHHHHTCC-------EEEECTTCTT--HHHHCHHHHHHHHH-T
T ss_pred cCCceEEECCCCCCCCccCCccc-CcCchhHHHHHHHHHHHhCCc-------EEEeccchHH--HHHHhHHHHHHHHH-h
Confidence 99999999999999999999876 899999999999999987532 9999998764 67788887777776 5
Q ss_pred CCCCCCCCeeeeecccccccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHH
Q psy9575 319 NVNALKEPIPVIPTIHYQMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHI 398 (786)
Q Consensus 319 g~d~~~~~i~v~p~~~~t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~a 398 (786)
|+||. +++++.|..|+++|||.||+++| |+|||||||||+++.++||+||++|+++.++++||++||++|
T Consensus 299 G~dp~-~~i~v~p~~~~~~GGI~vd~~~~---------t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~ 368 (472)
T 2e5v_A 299 GHNYK-VKIPIFPAAHFVDGGIRVNIRGE---------SNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYV 368 (472)
T ss_dssp TCCTT-SCEECEEEEEEESCEEECCTTCB---------CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTT
T ss_pred CcCcc-cceEeehhhceeCCCeEECCCCc---------cccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 99999 99999999999999999999999 999999999999966999999999999999999999999998
Q ss_pred HHHhhhccCCCCCCcccHHHHHHHHhhhhhCCCCCCHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHHHhccccc
Q psy9575 399 LSLELKKIHNKKLPINSIDIIIDRLSKLENNKGSESVQSVANDIRKTMQNYCGVFRTDKLMKNGYKKIMILDERRKYISF 478 (786)
Q Consensus 399 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~l~~l~~l~~~~~~~~~ 478 (786)
+++... .... . ..+....++.++.+++.+||++||+++|++|++++|++++++|+.|++
T Consensus 369 a~~~~~------~~~~-~-------~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~~~~~~~~~~------- 427 (472)
T 2e5v_A 369 DSSWEG------ISTD-D-------GIVHSVRISGNKTLSLKEIRRINWENVGIIRNEEKLVKAINTYSSSTQ------- 427 (472)
T ss_dssp TSCCCC------CCCT-T-------EEEEEECCCCCCCCCHHHHHHHHHHHSSSSBCHHHHHHHHHHHTTCCC-------
T ss_pred Hhhccc------chhh-h-------hhcccccccCChHHHHHHHHHHHHHhcCcccCHHHHHHHHHHHHHHHH-------
Confidence 765311 1000 0 000011234566778899999999999999999999999999976521
Q ss_pred cCCCcccchHHHHHHhHhhHHHHHHHHHHHHhhcccCCcccccCCCCCCCcccccceEEEEe
Q psy9575 479 KDKSKIFNTARIEALELDNLIETAKATISSAISRKESRGAHAHNDFKNRDDINWLKHSIWYS 540 (786)
Q Consensus 479 ~~~~~~~~~~l~~~~e~~~~~~~a~~~~~aal~R~ESRG~h~R~D~p~~d~~~~~~~~~~~~ 540 (786)
+|+++|+++++|||+|+||||+|||+|||++||+ |.+++++..
T Consensus 428 ------------------~~~~~a~~~~~~al~R~esrG~h~r~d~p~~~~~-~~~~~~~~~ 470 (472)
T 2e5v_A 428 ------------------NEAIISYLTALAAEIRKESRGNHFREDYPYKDPN-WEKRIYFKL 470 (472)
T ss_dssp ------------------HHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCGG-GCSEEEEEE
T ss_pred ------------------HHHHHHHHHHHHHHhccccccceecccCCCcChh-hhceEEEEe
Confidence 2899999999999999999999999999999984 999987754
No 9
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=100.00 E-value=1.9e-51 Score=475.90 Aligned_cols=368 Identities=27% Similarity=0.443 Sum_probs=309.9
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCC----C-CCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNM----S-KDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPK 75 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~----~-~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~ 75 (786)
|+||+.|+++|++|+||||....+|+|.+++||+++..... + .|+++.++.++++.+.+..++++++.+++.+++
T Consensus 139 l~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 218 (571)
T 1y0p_A 139 FSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDPALVKVLSSHSKD 218 (571)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHccHH
Confidence 57999999999999999999888888999999987654321 1 688999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecC--CcHHHHHHHHHHHHhcCCceEEeceEEEeeeec
Q psy9575 76 VVYELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVAD--RTGHALLHTLYQRNLHAKTNFFIEWMAIDLISD 153 (786)
Q Consensus 76 ~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~--~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~ 153 (786)
.++||.++|++|... ..++++ ..+|..+..+ .+|..+...|.+.+++.||+|+++++|++|+.+
T Consensus 219 ~~~~l~~~Gv~~~~~-------~~~~g~-------~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 284 (571)
T 1y0p_A 219 SVDWMTAMGADLTDV-------GMMGGA-------SVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKD 284 (571)
T ss_dssp HHHHHHHTTCCCCEE-------ECCTTC-------SSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred HHHHHHhcCCCCccC-------cccCCc-------CCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEc
Confidence 999999999998531 234555 6677776654 578899999999999999999999999999987
Q ss_pred CCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc------Cc------cCcccCCCchHHHHHHHHCCCCccCCCccc
Q psy9575 154 SEGDILGVVALEMETGNIMILESKITILATGGGGRI------WA------ASTNAFINTGDGLGMAARAGLPLEDMEFWQ 221 (786)
Q Consensus 154 ~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~------~~------~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q 221 (786)
++|+|+|+.+.+ .+|+...|+|+.|||||||++++ |. .+++++.+||||+.||+++||.+.+|+|+|
T Consensus 285 ~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~n~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~Ga~~~~~~~~~ 363 (571)
T 1y0p_A 285 DKGTVKGILVKG-MYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAENAGGALKDMQYIQ 363 (571)
T ss_dssp TTSCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBCSCTTCSSHHHHHHHHTTCCEECTTCEE
T ss_pred CCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCcccCHHHHHHhCccccCCcccCCCCCchHHHHHHHHcCCcEeCCccee
Confidence 448999998865 46877789999999999999974 32 467788999999999999999999999999
Q ss_pred cccccccCCCCccccccccCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCCCCCCCeEEEeC------
Q psy9575 222 FHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGCGPNKDHVMLDL------ 295 (786)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~~~~~~~v~ld~------ 295 (786)
+||+.+...+.+.++.++++|+++||.+|+||++ |+.+|+++++++..+... . .++.+|.
T Consensus 364 ~~p~~~~~~~~~~~~~~~~~g~i~vn~~G~RF~~-------E~~~~~~~~~a~~~~~~~--~-----~~~i~d~~~~~~~ 429 (571)
T 1y0p_A 364 AHPTLSVKGGVMVTEAVRGNGAILVNREGKRFVN-------EITTRDKASAAILAQTGK--S-----AYLIFDDSVRKSL 429 (571)
T ss_dssp EEEEEETTTCSBCCTHHHHTTCEEECTTSCCCSC-------TTSCHHHHHHHHHTSGGG--C-----EEEEEEHHHHHHC
T ss_pred ecCcccCCCCceeeecccCCceEEECCCCCCCcC-------CCCcHhHHHHHHHhCcCC--C-----EEEEEChHHHhhh
Confidence 9999887777777777888999999999999998 678899999988754211 0 1233331
Q ss_pred ------------------------CCCChhHHHhHchhHHHHHHhhcCCCC-----------CCCC---eeeeecccccc
Q psy9575 296 ------------------------RHINSETIINRLPSILEIGNKFANVNA-----------LKEP---IPVIPTIHYQM 337 (786)
Q Consensus 296 ------------------------~~~~~~~~~~~~~~~~~~~~~~~g~d~-----------~~~~---i~v~p~~~~t~ 337 (786)
.+++++.+++++..|++.+.+ |.|+ .+.| +++.|..|+||
T Consensus 430 ~~~~~~~~~g~~~~~~tl~ela~~~gi~~~~l~~tv~~yn~~~~~--g~D~~f~k~~~~~~i~~~Pfya~~~~p~~~~t~ 507 (571)
T 1y0p_A 430 SKIDKYIGLGVAPTADSLVKLGKMEGIDGKALTETVARYNSLVSS--GKDTDFERPNLPRALNEGNYYAIEVTPGVHHTM 507 (571)
T ss_dssp TTHHHHHHHTCCCEESSHHHHHHHHTSCHHHHHHHHHHHHHHHHH--TCCTTTCCSCCCCCSCSSCEEEEEEEEEEEEEC
T ss_pred hhHHHHhhCCeEEEeCCHHHHHHHhCcCHHHHHHHHHHHHHHHHc--CCCcccCCCCCCCcCCCCCEEEEEEeeeeeEec
Confidence 135566677777888887775 5553 2345 89999999999
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
|||+||+++||||.++ |+|||||||||++ +|+||+||+||++|++|+|||++||++||++++
T Consensus 508 GGl~id~~~~vl~~~g---~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~~ 569 (571)
T 1y0p_A 508 GGVMIDTKAEVMNAKK---QVIPGLYGAGEVT-GGVHGANRLGGNAISDIITFGRLAGEEAAKYSK 569 (571)
T ss_dssp CEEEBCTTCEEECTTS---CEEEEEEECSTTE-ESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCeEECCCceEECCCC---CCcCCcEeceEcC-CCCcCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998 9999999999998 699999999999999999999999999998764
No 10
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=100.00 E-value=3.7e-51 Score=472.25 Aligned_cols=369 Identities=27% Similarity=0.451 Sum_probs=308.9
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCC----C-CCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNM----S-KDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPK 75 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~----~-~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~ 75 (786)
|+||+.|++.|++|+|+||....+|.+.+++|++++..... + .|+++.++.++++.+.+..++++++.+++.+.+
T Consensus 139 ~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~ 218 (572)
T 1d4d_A 139 LAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNINDPELVKVLANNSSD 218 (572)
T ss_dssp HHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHccHH
Confidence 57999999999999999999888888999999998765432 1 588999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecC--CcHHHHHHHHHHHHhcCCceEEeceEEEeeeec
Q psy9575 76 VVYELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVAD--RTGHALLHTLYQRNLHAKTNFFIEWMAIDLISD 153 (786)
Q Consensus 76 ~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~--~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~ 153 (786)
.++||.++|++|... ..++++ ..+|..+..+ .+|..++..|.+.+++.||+|+++++|++|+.+
T Consensus 219 ~i~~l~~~Gv~~~~~-------~~~gg~-------~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 219 SIDWLTSMGADMTDV-------GRMGGA-------SVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED 284 (572)
T ss_dssp HHHHHHHHTCCCCEE-------ECCTTC-------SSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred HHHHHHhcCCccccc-------cccCCC-------cCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC
Confidence 999999999998542 234566 6777776554 358899999999999999999999999999987
Q ss_pred CCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc------Cc------cCcccCCCchHHHHHHHHCCCCccCCCccc
Q psy9575 154 SEGDILGVVALEMETGNIMILESKITILATGGGGRI------WA------ASTNAFINTGDGLGMAARAGLPLEDMEFWQ 221 (786)
Q Consensus 154 ~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~------~~------~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q 221 (786)
++|+|+|+.+.+ .+|+...|+||.|||||||++.+ |. .+++++.+||||+.||+++||.+.+|+|+|
T Consensus 285 ~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~p~~~~~~~~~~~~~tGdgi~~a~~~Ga~~~~~~~~q 363 (572)
T 1d4d_A 285 ASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQAGAATRDLQYIQ 363 (572)
T ss_dssp --CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBSSCTTCSSHHHHHHHHTTBCEECTTCEE
T ss_pred CCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccCHHHHHHhCccccCCCccCCCCCccHHHHHHHHcCCeEeCCCcee
Confidence 438999998865 46777789999999999999976 32 367788999999999999999999999999
Q ss_pred cccccccCCCCccccccccCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCCCCCCCeEEEeC------
Q psy9575 222 FHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGCGPNKDHVMLDL------ 295 (786)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~~~~~~~v~ld~------ 295 (786)
|||+.....++++++.++++|+++||.+|+||++ |+.+|+.++++|+.+ ..+.. ++.+|-
T Consensus 364 ~~p~~~~~~~~l~~~~~~~~g~i~vn~~G~RF~~-------E~~~~~~~~~ai~~~-~~~~~------~~i~d~~~~~~~ 429 (572)
T 1d4d_A 364 AHPTYSPAGGVMITEAVRGNGAIVVNREGNRFMN-------EITTRDKASAAILQQ-KGESA------YLVFDDSIRKSL 429 (572)
T ss_dssp EEEEEETTTTEECCHHHHHTTCEEECTTSCCCSC-------TTSCHHHHHHHHHTS-GGGCE------EEEECHHHHTTC
T ss_pred EecccCCCccccchhhhccCceEEECCCCCCccC-------CCCCHhHHHHHHHhC-cCCeE------EEEEChHHhhhc
Confidence 9999877777888888899999999999999998 678899999998764 11110 122220
Q ss_pred ------------------------CCCChhHHHhHchhHHHHHHhhcCCCC-----------CCCC---eeeeecccccc
Q psy9575 296 ------------------------RHINSETIINRLPSILEIGNKFANVNA-----------LKEP---IPVIPTIHYQM 337 (786)
Q Consensus 296 ------------------------~~~~~~~~~~~~~~~~~~~~~~~g~d~-----------~~~~---i~v~p~~~~t~ 337 (786)
.+++++.++++++.|++.+.+ |.|+ .+.| +++.|..||||
T Consensus 430 ~~~~~~~~~~~~~~~~ti~ela~~~gi~~~~l~~tv~~yn~~~~~--g~D~~fg~~~~~~~i~~~Pfya~~v~p~~~~t~ 507 (572)
T 1d4d_A 430 KAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAKTVTAYNGFVKS--GKDAQFERPDLPRELVVAPFYALEIAPAVHHTM 507 (572)
T ss_dssp THHHHHHHTTCCEEESSHHHHHHHHTCCHHHHHHHHHHHHHHC-C--CCCTTTCCSCCCCCCCSSSEEEEEEEEEEEEEC
T ss_pred cchHHHhhCCcEEEeCCHHHHHHHcCCCHHHHHHHHHHHHHHHhc--CCCcccCCCCCCCcCCCCCEEEEEEEcccceeC
Confidence 135667777778888877764 5553 2456 89999999999
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
|||+||+++||||.++ .|+|||||||||++ +|+||+||+||++|++|+|||++||++|+++++
T Consensus 508 GGl~id~~~~Vl~~~g--~~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~~ 570 (572)
T 1d4d_A 508 GGLVIDTKAEVKSEKT--AKPITGLYAAGEVT-GGVHGANRLGGNAISDIVTYGRIAGASAAKFAK 570 (572)
T ss_dssp CEEEBCTTCEEEBSSS--SSEEEEEEECSTTE-ESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCeEECCCCeEEcCCC--CcccCCeeECeecc-cCCCCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999874 27999999999998 699999999999999999999999999998764
No 11
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=100.00 E-value=9.9e-51 Score=469.17 Aligned_cols=368 Identities=27% Similarity=0.449 Sum_probs=311.8
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCC-----CCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNM-----SKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPK 75 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~-----~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~ 75 (786)
|+||+.|+++|++|+||||....+|+|..++|++++..... -.|+++.++.++++.+.+..++++++.+++.+++
T Consensus 134 l~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (566)
T 1qo8_A 134 FNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSAD 213 (566)
T ss_dssp HHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHhccHH
Confidence 57999999999999999999988888999999997654321 1688999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecC--CcHHHHHHHHHHHHhcCCceEEeceEEEeeeec
Q psy9575 76 VVYELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVAD--RTGHALLHTLYQRNLHAKTNFFIEWMAIDLISD 153 (786)
Q Consensus 76 ~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~--~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~ 153 (786)
.++||.++|++|... ..++++ ..+|.++..+ .++..++..|.+.+++.||+|+++++|++|+.+
T Consensus 214 ~i~~l~~~Gv~~~~~-------~~~~g~-------~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 214 GVQWLESLGANLDDL-------KRSGGA-------RVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN 279 (566)
T ss_dssp HHHHHHHTTCCCCEE-------ECCTTC-------SSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC
T ss_pred HHHHHHhcCCccccc-------cccCCC-------CCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC
Confidence 999999999998542 234555 6677776554 358899999999999999999999999999987
Q ss_pred CCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc------Cc------cCcccCCCchHHHHHHHHCCCCccCCCccc
Q psy9575 154 SEGDILGVVALEMETGNIMILESKITILATGGGGRI------WA------ASTNAFINTGDGLGMAARAGLPLEDMEFWQ 221 (786)
Q Consensus 154 ~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~------~~------~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q 221 (786)
++++|+|+.+.+ .+|+...|+||.|||||||++.+ |. .+++++.+||||+.||+++||.+.+|+|+|
T Consensus 280 ~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~Ga~~~~~~~~~ 358 (566)
T 1qo8_A 280 DDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAKEIGASMTDIDWVQ 358 (566)
T ss_dssp TTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHHHHHHHTTBCEESTTCEE
T ss_pred CCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcccCHHHHHHhCccccCCcccCCCCCCcHHHHHHHHcCCeEecCccee
Confidence 438999998865 57877789999999999999986 42 356788999999999999999999999999
Q ss_pred cccccccCCCCccccccccCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHHHHHhcCCCCCCCCeEEEe-------
Q psy9575 222 FHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQEIKEGRGCGPNKDHVMLD------- 294 (786)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~~~~~g~g~~~~~~~v~ld------- 294 (786)
+||+.....++++++.++++++++||.+|+||++ |+.+++.++++++.+ ..+. .++.+|
T Consensus 359 ~~p~~~~~~~~~~~~~~~~~g~i~vn~~G~Rf~~-------E~~~~~~~~~~~~~~-~~~~------~~~i~d~~~~~~~ 424 (566)
T 1qo8_A 359 AHPTVGKDSRILISETVRGVGAVMVNKDGNRFIS-------ELTTRDKASDAILKQ-PGQF------AWIIFDNQLYKKA 424 (566)
T ss_dssp EEEEEESSSCSBCCTHHHHTTCEEECTTSCCCSC-------TTSCHHHHHHHHHTS-GGGC------EEEEEEHHHHHHC
T ss_pred ecccccCCccccchhhhccCCeEEECCCCCCccC-------CCCCHHHHHHHHHhC-CCCc------EEEEEChHHhhhh
Confidence 9998877677788888889999999999999998 667889888888753 1110 012222
Q ss_pred -----------------------CCCCChhHHHhHchhHHHHHHhhcCCCC-----------CCCC---eeeeecccccc
Q psy9575 295 -----------------------LRHINSETIINRLPSILEIGNKFANVNA-----------LKEP---IPVIPTIHYQM 337 (786)
Q Consensus 295 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~g~d~-----------~~~~---i~v~p~~~~t~ 337 (786)
..+++++.+.++++.|++.+.. |.|+ .+.| +++.|..|+||
T Consensus 425 ~~~~~~~~~~~~~~~~tl~eLa~~~gi~~~~l~~tv~~yn~~~~~--g~d~~fg~~~~~~~i~~~Pfya~~~~p~~~~t~ 502 (566)
T 1qo8_A 425 KMVRGYDHLEMLYKGDTVEQLAKSTGMKVADLAKTVSDYNGYVAS--GKDTAFGRADMPLNMTQSPYYAVKVAPGIHHTM 502 (566)
T ss_dssp HHHHHHHHTTCCEEESSHHHHHHHTTCCHHHHHHHHHHHHHHHHH--SCCTTTCCSCCCCCSCSSSEEEEEEEEEEEEEC
T ss_pred hhhHHHhhcCcEEEeCCHHHHHHHhCCCHHHHHHHHHHHHHHHhc--CCCcccCCCCCCCcCCCCCEEEEEEecccceec
Confidence 1246777888888899888875 5553 2346 89999999999
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
|||+||+++||||.++ |+|||||||||++ +|+||+||+||++|++|+|||++||++||++++
T Consensus 503 GGl~vd~~~~vl~~~g---~~I~GLyAaGe~~-~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 503 GGVAINTTASVLDLQS---KPIDGLFAAGEVT-GGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp CEECBCTTCEEEBTTS---CEEEEEEECSTTB-CSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccEEECCCCeEECCCC---CEeCCEEeccccc-CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998 9999999999998 699999999999999999999999999998874
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=100.00 E-value=5.4e-47 Score=432.62 Aligned_cols=377 Identities=19% Similarity=0.212 Sum_probs=280.0
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCC-----C-CCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGN-----M-SKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAP 74 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~-----~-~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~ 74 (786)
|+||++|+++|++|+||||....+|+|.+++|++...... . ..|+++.++.++++.+.+.+++++++.++++++
T Consensus 54 l~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (510)
T 4at0_A 54 VAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGPGADEEKITDYCEGSV 133 (510)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCSSCCHHHHHHHHHTHH
T ss_pred HHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHhhH
Confidence 5899999999999999999998888888888876543211 1 168999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcccc-----------CCCcccccCCCCccCCCCCCCcceEEE-------ecCCcHH-HHHHHHHHHHh
Q psy9575 75 KVVYELEHFGMPFDRN-----------KNGTIYQRPFGGHSSNFGEKPIARACA-------VADRTGH-ALLHTLYQRNL 135 (786)
Q Consensus 75 ~~i~~l~~~Gv~~~~~-----------~~g~~~~~~~gg~~~~~~~~~~~r~~~-------~~~~~g~-~i~~~L~~~~~ 135 (786)
+.++||+++|++|... .++.+......++.......+.+|.+. ..+.+|. .++..|.+.++
T Consensus 134 ~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~~g~~~l~~~L~~~~~ 213 (510)
T 4at0_A 134 EHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEKGGGYMLMKPLVETAE 213 (510)
T ss_dssp HHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTBCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccccCCCHHHHHHHHHHHHH
Confidence 9999999999998754 111111111111100000012233332 2344565 89999999999
Q ss_pred cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEe-CeEEEcCCCCCcc-----------Ccc-CcccCCCchH
Q psy9575 136 HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILES-KITILATGGGGRI-----------WAA-STNAFINTGD 202 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~A-kaVVlATGG~~~~-----------~~~-~~~~~~~tGd 202 (786)
+.||+|+++++|++|+.+++|+|+||.+.+ +++...|+| |.|||||||++.+ +.. +++++.+|||
T Consensus 214 ~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~n~~m~~~~~p~~~~~~~~~~~~~tGd 291 (510)
T 4at0_A 214 KLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFAYNDKMIEAHAPRLIGRPGAAIEEHDGR 291 (510)
T ss_dssp HTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCBCCSCTTCCCH
T ss_pred HcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChhhCHHHHHHhCccccCCCCCCCCCCCHH
Confidence 999999999999999998449999998865 566678999 5999999999963 222 4567889999
Q ss_pred HHHHHHHCCCCccCCCccccccccccCCCCccccccccCCcEEEcCCCCccccccCCccCCCCchhHHHHHHHH------
Q psy9575 203 GLGMAARAGLPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPILKDLAPRDFVSRAMDQ------ 276 (786)
Q Consensus 203 g~~~a~~aGa~l~~~e~~q~~p~~~~~~~~~~~~~~~~~g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~------ 276 (786)
|+.||+++||.+.+||++|++|... +.. ..++++||.+|+||++|. .+++.+++++..
T Consensus 292 Gi~ma~~~Ga~~~~m~~~~~~p~~~--~~~-------~~~~i~vn~~G~RF~nE~-------~~~~~~~~~~~~~~~~~~ 355 (510)
T 4at0_A 292 SILMAQALGADLAHMDATEVAFVCD--PQL-------IVRGILVNGRGQRYVPED-------TYSGRIGQMTLFHQDNQA 355 (510)
T ss_dssp HHHHHHTTTBCEECTTCEEEEECSC--HHH-------HTTSEEECTTSCBCSCTT-------SCHHHHHHCCCCCSTTCC
T ss_pred HHHHHHHhCcCeecchhhhccCccC--hhh-------ccccEEECCCCCCCCCCC-------ccHHHHHHHHHhCCCCeE
Confidence 9999999999999999999877531 111 135899999999999963 334444333221
Q ss_pred ----------HHHhcCC-C--CCCCCeEEEe-------CCCCChhHHHhHchhHHHHHHhhcCCCCC--CCC--------
Q psy9575 277 ----------EIKEGRG-C--GPNKDHVMLD-------LRHINSETIINRLPSILEIGNKFANVNAL--KEP-------- 326 (786)
Q Consensus 277 ----------~~~~g~g-~--~~~~~~v~ld-------~~~~~~~~~~~~~~~~~~~~~~~~g~d~~--~~~-------- 326 (786)
....... . .+.-.....| ..+++++.+++++..|++.+.+ |.|+. +++
T Consensus 356 ~~i~D~~~~~~~~~~~~~~~~~~~~~~~~adtleeLA~~~g~~~~~l~~tv~~yN~~~~~--g~D~~fgk~~~~l~pi~~ 433 (510)
T 4at0_A 356 FLIIDEASYEEGAAATTATPFLRVQPKWAAETVEELESDMGLPAGALQSTVEVYNKHAAE--GSDPLLHKKSEWVKPIGT 433 (510)
T ss_dssp EEEEEHHHHHHHHHSCCSCGGGCCCCSEEESSHHHHHHHTTCCTTHHHHHHHHHHHHHTT--TCCTTTCCCGGGCCCCCS
T ss_pred EEEECHHHHHhhhcccccccchhhhhcccCCCHHHHHHHhCcCHHHHHHHHHHHHHHHhc--CCCcccCCCcccccCCCC
Confidence 1110000 0 0000001111 1145677888888899988875 66653 332
Q ss_pred ----eee-eecccccccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHH
Q psy9575 327 ----IPV-IPTIHYQMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSL 401 (786)
Q Consensus 327 ----i~v-~p~~~~t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~ 401 (786)
+++ .|..|+|+|||+||+++||||.|+ ++|||||||||++ +|+||+||++|++|++|+||||+||++||++
T Consensus 434 Pfya~~~~~~~~~~t~GGl~~d~~~~Vl~~~g---~~I~GLyAaGe~~-gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~~ 509 (510)
T 4at0_A 434 PVAALDLRGFTLGFTLGGLRTTVNSEVLHVSG---EPIPGLFAAGRCT-SGVCAGGYASGTSLGDGSFYGRRAGISAAKQ 509 (510)
T ss_dssp SEEEEECTTCEEEEECCEECBCTTCEEEBTTS---SEEEEEEECGGGB-CCSCSSSCCTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CEEEEEeecCcccccCcCeeECCCCceECCCC---CCcCCeeeceecc-cCCCcCCCCcHHhHHHHHHHHHHHHHHHHhc
Confidence 344 578899999999999999999999 9999999999999 5999999999999999999999999999864
No 13
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=100.00 E-value=4.8e-47 Score=387.34 Aligned_cols=229 Identities=50% Similarity=0.946 Sum_probs=205.5
Q ss_pred cccccCCCCcCCCCCcceeEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccc-c
Q psy9575 556 TVKTVHPKKHHDIKPYMQKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNE-L 634 (786)
Q Consensus 556 ~v~~~~p~~r~~~~~~~~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~-~ 634 (786)
+|+||+|+. .+.+|||++|+|++++.++||||||++++++++|+|+|+.+|+.|+||+|+|+|||++++||.|++.+ .
T Consensus 39 ~I~R~~p~~-~~~~p~~~~~~v~v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~InG~~~laC~t~v~~~~ 117 (282)
T 3vr8_B 39 EIYRFNPEE-PGAKPKLQKFDVDLDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAGENTLACICNIDQNT 117 (282)
T ss_pred EEEEeCCCC-CCCCCCcEEEEEEeCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEECCEEecchhhhHhHhc
Confidence 389999973 35679999999999882399999999999878999999999999999999999999999999999985 4
Q ss_pred CcceEECCCCCCCceeeeeecchHhHHhcccccceeecCCCC--CcccccCChhHHHhhhchhhCcccCcccCCCCCccc
Q psy9575 635 KQPIIIRPLPGLPVIRDLVVDMTLFFKQFNSIKPFLITNNNP--PEKERLQSPSQRKILDGLYECILCGCCSTACPSFWW 712 (786)
Q Consensus 635 ~~~~~i~p~~~~~~~~dL~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP~~~~ 712 (786)
..+++||||++||++|||++|++.|+++++.++||+..+... ++.+..+++++++.++++++||+||+|.++||++.+
T Consensus 118 ~~~~tIepL~~~pVikDLvvD~~~f~~~~~~v~p~l~~~~~~~~~~~~~~qs~~~~~~~~~~~~CI~CG~C~~aCP~~~~ 197 (282)
T 3vr8_B 118 SKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPWLQKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSASCPSYWW 197 (282)
T ss_pred CCcEEeccCCCCceeeccccccHHHHHHHHHHhhhcCCCCCCCCCchhcccCHHHHHHHHhhhhCcccCcCcccCCceec
Confidence 578999999999999999999999999999999999876532 345677899999999999999999999999999988
Q ss_pred CCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCCChHHHHHHHHHHHHHhc
Q psy9575 713 NSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGLNPNRSINKIKELMIYRI 785 (786)
Q Consensus 713 ~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~ 785 (786)
++++|+||++++.+++++.++++....+++..+....++|.|++||+|+++||++|++.++|..+|+.+++.+
T Consensus 198 ~~~~~lGP~~li~a~r~~~d~rd~~~~erl~~l~~~~~l~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~~ 270 (282)
T 3vr8_B 198 NADKYLGPAVLMQAYRWIIDSRDDSAAERLARMQDGFSAFKCHTIMNCTKTCPKHLNPARAIGEIKMLLTKMK 270 (282)
T ss_pred cCCcCCCHHHHHHHHHHHhCCcccchHHHHHHHhhcCCcccChhhCCccccCcCCCCHHHHHHHHHHHHHHhc
Confidence 7778999999999999999998877667776665667899999999999999999999999999999988764
No 14
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=100.00 E-value=4.4e-42 Score=352.45 Aligned_cols=228 Identities=50% Similarity=0.961 Sum_probs=197.5
Q ss_pred CcccccCCCCcCCC-CCcceeEEEEcCC-CChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccc
Q psy9575 555 LTVKTVHPKKHHDI-KPYMQKFLVNLSS-NDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLN 632 (786)
Q Consensus 555 ~~v~~~~p~~r~~~-~~~~~~~~v~~~~-~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~ 632 (786)
+.|+||+|+. ++ +|||++|+|++++ + +||||||++++++++|+|+|+.+|+.|+||+|+|+|||++++||+|++.
T Consensus 14 ~~i~R~~~~~--~~~~~~~~~~~v~~~~~~-~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i~G~~~~aC~~~~~ 90 (252)
T 2h88_B 14 FSIYRWDPDK--PGDKPRMQTYEVDLNKCG-PMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKID 90 (252)
T ss_dssp EEEEECCTTS--TTSCCEEEEEEEEGGGSC-SBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEETTEEEEGGGSBCC
T ss_pred EEEEEeCCCC--CCCCceEEEEEEecCCCC-ChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEECCcEEccccCCHh
Confidence 3499999875 44 7999999999988 6 8999999999987899999999999999999999999999999999999
Q ss_pred cc-CcceEECCCCCCCceeeeeecchHhHHhcccccceeecCCCC--CcccccCChhHHHhhhchhhCcccCcccCCCCC
Q psy9575 633 EL-KQPIIIRPLPGLPVIRDLVVDMTLFFKQFNSIKPFLITNNNP--PEKERLQSPSQRKILDGLYECILCGCCSTACPS 709 (786)
Q Consensus 633 ~~-~~~~~i~p~~~~~~~~dL~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP~ 709 (786)
++ ..+++||||++||+++||++|++.++.+++.+++|+...... +..+..+++++...+.+.++||+||.|+++||+
T Consensus 91 ~~~g~~~~iepl~~~pvikDLvvD~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~Ci~CG~C~~~CP~ 170 (252)
T 2h88_B 91 PDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPS 170 (252)
T ss_dssp CCTTSCEEEECSTTCBEEETTEECCHHHHHHHHHTCCSCCCSCCTTTTSSCCCCCHHHHHTTTTTTTCCCCCTTGGGCHH
T ss_pred HcCCCceEEecccCCCccccceeccHHHHHHhhhccCccccCCCCCCccccccCCHHHHHHhHhHHhchhhCcchhhCCC
Confidence 86 347999999999999999999999999998889998765432 222356778888888889999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCCChHHHHHHHHHHHHHhc
Q psy9575 710 FWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGLNPNRSINKIKELMIYRI 785 (786)
Q Consensus 710 ~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~ 785 (786)
+..+..+|++|+.+..+++++.++++.....++..+.+..++|.|+.||.|+.+||++|++.++|..+|+.+++++
T Consensus 171 ~~~~~~~~lgP~~~~~~~r~~~~~r~~~~~~r~~~~~~~~~~~~C~~Cg~C~~~CP~~i~~~~~i~~lr~~~~~~g 246 (252)
T 2h88_B 171 YWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYK 246 (252)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHCC
T ss_pred CccCCCCcCCHHHHHHHHHHhhCCcccchHHHHHHHhcccCCCcCccccchhhhcCCCCCHHHHHHHHHHHHHHcC
Confidence 8765557999999999999888887665555555444456789999999999999999999999999999998765
No 15
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=100.00 E-value=8.4e-41 Score=341.68 Aligned_cols=228 Identities=28% Similarity=0.533 Sum_probs=195.3
Q ss_pred CcccccCCCCcCC-CCCcceeEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccc
Q psy9575 555 LTVKTVHPKKHHD-IKPYMQKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNE 633 (786)
Q Consensus 555 ~~v~~~~p~~r~~-~~~~~~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~ 633 (786)
++|+||+|+. + .+|||++|+|+++++ +||||||++++++++|+|+|+.+|+.|+||+|+|+|||++.+||.|++.+
T Consensus 7 ~~i~R~~~~~--~~~~~~~~~~~v~~~~~-~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i~G~~~~aC~~~~~~ 83 (241)
T 2bs2_B 7 IRVFKYDPQS--AVSKPHFQEYKIEEAPS-MTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMINGRPSLACRTLTKD 83 (241)
T ss_dssp EEEEECCTTC--TTCCCEEEEEEEECCTT-CBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBGGG
T ss_pred EEEEEeCCCC--CCCCceEEEEEEeCCCC-ChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEECCCeecchhCcHhH
Confidence 3599999975 4 689999999999887 99999999999888999999999999999999999999999999999998
Q ss_pred cC-cceEECCCCCCCceeeeeecchHhHHhc-ccccceeecCCC-CCccccc-CChhHHHhhhchhhCcccCcccCCCCC
Q psy9575 634 LK-QPIIIRPLPGLPVIRDLVVDMTLFFKQF-NSIKPFLITNNN-PPEKERL-QSPSQRKILDGLYECILCGCCSTACPS 709 (786)
Q Consensus 634 ~~-~~~~i~p~~~~~~~~dL~~d~~~~~~~~-~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~CI~Cg~C~~~CP~ 709 (786)
+. ++++|+|+++||+++||++|.+++++++ ..+++|+..... .+..... .++.+.+.+.+.++||+||+|+.+||+
T Consensus 84 ~~g~~~~ie~l~~~pvikDLvvD~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~ 163 (241)
T 2bs2_B 84 FEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHDISKLEERIEPEVAQEVFELDRCIECGCCIAACGT 163 (241)
T ss_dssp CTTSEEEEECCTTSEEEETTEEECHHHHHHHHHHTTCSCCCSSCCCTTSCCCCCCHHHHHHHHHHHTCCCCCHHHHTCHH
T ss_pred cCCCeEEEecCCCCCcceeceeeCHHHHHHHHHHhcCeeccCCCCCCccccccCCHHHHHHhhhhhhhhccCcCcccCCC
Confidence 63 6799999999999999999999999999 888999876543 2333343 677777777779999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHhhcC-cchhhHHHhhhccCCCccccccccccchhhCCCCCChHHHHHHHHHHHHHhcC
Q psy9575 710 FWWNSDRFVGPAGLLQAYRFISDS-RDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGLNPNRSINKIKELMIYRII 786 (786)
Q Consensus 710 ~~~~~~~~~gp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~~ 786 (786)
+.... +|++|..+..++++..++ ++....+++..+......|.|+.||.|+++||++|++.++|..+|+.++++|+
T Consensus 164 ~~~~~-~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~~i~~~~~i~~lr~~~~~~g~ 240 (241)
T 2bs2_B 164 KIMRE-DFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSKIAYLRRKMVSVNM 240 (241)
T ss_dssp HHHCT-TCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHTTCC-
T ss_pred CccCC-CCCCHHHHHHHHHHhhCccccccHHHHHHHHhcccCcccCcccChhhHhcCCCCChHHHHHHHHHHHHHhcC
Confidence 87654 589999999999888776 55444445544444567899999999999999999999999999999988774
No 16
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=100.00 E-value=3.1e-40 Score=337.05 Aligned_cols=227 Identities=59% Similarity=1.125 Sum_probs=194.2
Q ss_pred CcccccCCCCcCCCCCcceeEEEEcCC--CChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccc
Q psy9575 555 LTVKTVHPKKHHDIKPYMQKFLVNLSS--NDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLN 632 (786)
Q Consensus 555 ~~v~~~~p~~r~~~~~~~~~~~v~~~~--~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~ 632 (786)
++|+||+|+. ++.|||++|+|++++ + +||||||++++++ +|+|+|+.+||.|+||+|+|+|||+++|||.|++.
T Consensus 5 ~~i~R~~~~~--~~~~~~~~~~v~~~~~~~-~tll~~l~~~~~~-~~~l~~~~~C~~g~Cg~C~v~v~G~~~laC~~~~~ 80 (238)
T 2wdq_B 5 FSIYRYNPDV--DDAPRMQDYTLEADEGRD-MMLLDALIQLKEK-DPSLSFRRSCREGVCGSDGLNMNGKNGLACITPIS 80 (238)
T ss_dssp EEEEECCTTT--CSSCEEEEEEEECCTTCC-CBHHHHHHHHHHH-CTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBGG
T ss_pred EEEEEcCCCC--CCCCceEEEEeecCCCCC-ChHHHHHHHhccc-CCCccccccCCCCCCCCCEEEECCEEEcccccchh
Confidence 4599999975 568999999999988 6 9999999999986 99999999999999999999999999999999999
Q ss_pred c-cC--cceEECCCCCCCceeeeeecchHhHHhcccccceeecCCCC-CcccccCChhHHHhhhchhhCcccCcccCCCC
Q psy9575 633 E-LK--QPIIIRPLPGLPVIRDLVVDMTLFFKQFNSIKPFLITNNNP-PEKERLQSPSQRKILDGLYECILCGCCSTACP 708 (786)
Q Consensus 633 ~-~~--~~~~i~p~~~~~~~~dL~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP 708 (786)
+ |+ ..++||||.++|+++||++|.+.++++++.+.+|+...... +..+..+++.+...+.+.++||+||+|+++||
T Consensus 81 ~~g~~~~~~~ie~l~~~pvi~dlv~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP 160 (238)
T 2wdq_B 81 ALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP 160 (238)
T ss_dssp GTCCTTSCEEEECCTTSBEEETTEECCHHHHHHHHHTCCSCCCCCSSCCSSSCCCCHHHHHTTTTTTTCCCCCTTGGGCH
T ss_pred hhccCCCCEEEeeCCCCcchhhceechHHHHHHHHhhcCccccCcCCCCcccccCCHHHHHHHhccccccccCCchhhCc
Confidence 9 55 24899999999999999999999988898888888665422 23344567777788888999999999999999
Q ss_pred CcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCCChHHHHHHHHHHHHHhc
Q psy9575 709 SFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGLNPNRSINKIKELMIYRI 785 (786)
Q Consensus 709 ~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~ 785 (786)
.+.....++++|+.+..+++...++++.....++..+......+.|++||+|+++||++|++.++|..+|+.+++++
T Consensus 161 ~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~ 237 (238)
T 2wdq_B 161 SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRN 237 (238)
T ss_dssp HHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCCCCHHHHHHHHHHHhCCcccchHHHHHHHhccCCCCcCcccchhhhhcCCCCCHHHHHHHHHHHHHhhc
Confidence 98766556899999998888877776654444554444445789999999999999999999999999999998764
No 17
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=100.00 E-value=1.2e-39 Score=333.83 Aligned_cols=227 Identities=33% Similarity=0.606 Sum_probs=193.2
Q ss_pred CcccccCCCCcCCCCCcceeEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccccc
Q psy9575 555 LTVKTVHPKKHHDIKPYMQKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNEL 634 (786)
Q Consensus 555 ~~v~~~~p~~r~~~~~~~~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~ 634 (786)
+.|+||+|+. +++|||+.|+|+++++ +||||||+++|++++|+|+|+.+|+.|+||+|+|+|||++++||.|++.++
T Consensus 8 ~~i~R~~~~~--~~~~~~~~~~~~~~~~-~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v~G~~~~aC~~~~~~~ 84 (243)
T 1kf6_B 8 IEVVRYNPEV--DTAPHSAFYEVPYDAT-TSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDY 84 (243)
T ss_dssp EEEEECCTTT--CSSCEEEEEEEEECTT-CBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETTEEEEGGGCBGGGC
T ss_pred EEEEEcCCCC--CCCCeeEEEEEecCCC-ChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEECCEEEeeeeeEHhhC
Confidence 3499999975 5689999999999987 999999999998779999999999999999999999999999999999998
Q ss_pred CcceEECCCCCCCceeeeeecchHhHHhcccccceeecCCCCCccc-ccCChhHHHhhhchhhCcccCcccCCCCCcccC
Q psy9575 635 KQPIIIRPLPGLPVIRDLVVDMTLFFKQFNSIKPFLITNNNPPEKE-RLQSPSQRKILDGLYECILCGCCSTACPSFWWN 713 (786)
Q Consensus 635 ~~~~~i~p~~~~~~~~dL~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~CI~Cg~C~~~CP~~~~~ 713 (786)
...++|+|++.++++|||.+|++.+..++...++|+......++.+ ..+++++...+.+.++||+||+|+++||.....
T Consensus 85 ~~~~~i~~l~~~~~~kdl~~dl~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~~~~~ 164 (243)
T 1kf6_B 85 TDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLN 164 (243)
T ss_dssp TTCEEEECCTTSCEEETTEECCHHHHHHHHHTCCSCCSCCCCGGGCCCCCCHHHHHTTGGGGCCCCCCHHHHHCHHHHHC
T ss_pred CCcEEEEecCCCCccceeEEecHHHHHHHHhcCCeeccCcCCCccccccCCHHHHHHhhhhhhccccCccccccCCCccc
Confidence 7779999999999999999999999999988888876543323333 456677777778899999999999999998765
Q ss_pred CCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCCChHHHHHHHHHHHHHhc
Q psy9575 714 SDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGLNPNRSINKIKELMIYRI 785 (786)
Q Consensus 714 ~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~ 785 (786)
.. +++|..+..++++..++++.....++..+....+.+.|++||+|+.+||+||++.++|..+|+.+++.+
T Consensus 165 ~~-~~gP~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~~r~~~~~~g 235 (243)
T 1kf6_B 165 PE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDF 235 (243)
T ss_dssp TT-SCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred CC-CCCHHHHHHHHHHhhCccccchHHHHHHHhccCCcccCcccCCcchhCCCCCCHHHHHHHHHHHHHHcc
Confidence 44 899999999888877766543333333333345789999999999999999999999999999988765
No 18
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.97 E-value=1.8e-29 Score=283.03 Aligned_cols=351 Identities=19% Similarity=0.240 Sum_probs=221.0
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||+.|++.|.+|+|+||....++.+..++||.+...+ ...++.++..+. ....+... .+. .....+.++|+
T Consensus 39 l~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~---~~~~~~~~~~~~-~~~~~~~~-~~~--~~~~~~~~~~~ 111 (447)
T 2i0z_A 39 LMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTN---RLPLDEIVKHIP-GNGRFLYS-AFS--IFNNEDIITFF 111 (447)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEE---CSCHHHHHHTCT-BTGGGGHH-HHH--HSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccC---cccHHHHHHHhc-cChHHHHH-HHH--hcCHHHHHHHH
Confidence 579999999999999999988766666667666554432 233433332211 01011111 111 12345778899
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILG 160 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G 160 (786)
.++|+++.....|.+ ++.+..+..+.+.|.+.+++.||+|+++++|++|..++ ++|++
T Consensus 112 ~~~G~~~~~~~~g~~---------------------~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~ 169 (447)
T 2i0z_A 112 ENLGVKLKEEDHGRM---------------------FPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKA 169 (447)
T ss_dssp HHTTCCEEECGGGEE---------------------EETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEE
T ss_pred HhcCCceEEeeCCEE---------------------ECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEE
Confidence 999998865432221 12223567899999999999999999999999999875 88888
Q ss_pred EEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCCC--cccccccccc-CCCCccccc
Q psy9575 161 VVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDME--FWQFHPTGVA-GAGVLITEG 237 (786)
Q Consensus 161 ~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e--~~q~~p~~~~-~~~~~~~~~ 237 (786)
+.+ .+|+ .|+|+.||+|||+++. +..++||||+.++.++|+.+..+. +++|+++... ....+ .+
T Consensus 170 V~~---~~G~--~i~Ad~VVlAtGg~s~------~~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~~~~~~~~~~~--~g 236 (447)
T 2i0z_A 170 VIL---QTGE--VLETNHVVIAVGGKSV------PQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRDRSL--QG 236 (447)
T ss_dssp EEE---TTCC--EEECSCEEECCCCSSS------GGGSCSSHHHHHHHHTTCCEEEEEECSCCEECCCHHHHTTTT--TT
T ss_pred EEE---CCCC--EEECCEEEECCCCCcC------CCCCCCcHHHHHHHHCCCCcccCcceeeeeecCCcccccccc--cC
Confidence 775 5664 5899999999999983 346899999999999999987764 5555543211 00001 01
Q ss_pred cc-cCCcEEE-cCCCCccccccCC----ccCCCCchh-HHHHHHHHHHHhcCCCCCCCCeEEEeCC-CCChhHHHhHc--
Q psy9575 238 VR-GEGGILI-NSNGERFMERYAP----ILKDLAPRD-FVSRAMDQEIKEGRGCGPNKDHVMLDLR-HINSETIINRL-- 307 (786)
Q Consensus 238 ~~-~~g~~~v-n~~G~rf~~~~~p----~~~~~~~~~-~~~~~i~~~~~~g~g~~~~~~~v~ld~~-~~~~~~~~~~~-- 307 (786)
+. ....+.+ |.+|+||+++... ..+-..+.- ..++.+...+ ++... ....+.+|+. .++.+.+.+.+
T Consensus 237 ~~~~~~~~~~~~~~g~r~~~~~ge~~~t~~~~~g~~~l~~s~~~~~~~-~~~~~--~~~~~~~d~~~~~~~~~~~~~l~~ 313 (447)
T 2i0z_A 237 LALRDINLSVLNPKGKAIISHKMDMLFTHFGLSGPAALRCSQFVVKAL-KKFKT--NTIQMSIDALPEENSEQLFQRMLK 313 (447)
T ss_dssp CEEEEEEEEECC----CEEEEEEEEEECSSEEESHHHHHHHHHHHHHH-HHHCC--SCEEEEEESCTTSCHHHHHHHHHH
T ss_pred cccCCeEEEEEecCCceEecccCCeEEECCcccHHHHHHHHHHHHHHH-hcccC--CceEEEEECCCCCCHHHHHHHHHH
Confidence 11 1234566 7788887653111 110001111 1233332333 22100 0012566643 34444442211
Q ss_pred ------------------hh-HHHHHHhhcCCCCCC-----------------CCeeeee-------cccccccCcccCC
Q psy9575 308 ------------------PS-ILEIGNKFANVNALK-----------------EPIPVIP-------TIHYQMGGIPTNI 344 (786)
Q Consensus 308 ------------------~~-~~~~~~~~~g~d~~~-----------------~~i~v~p-------~~~~t~GGi~vd~ 344 (786)
|. +.+.+.+..|+|+.+ +.+++.+ .+|+|+|||.+|+
T Consensus 314 ~~~~~~~~~l~~~l~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~T~GGv~~~~ 393 (447)
T 2i0z_A 314 QMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKE 393 (447)
T ss_dssp HHTTSTTSBHHHHTTTSSCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHHEEEEECEECCGGGCSSEEEEECGGG
T ss_pred HHHhChhhhHHHhccccChHHHHHHHHHHcCCCcCCchhhCCHHHHHHHHHHhhCCEEEecCCCCccEEEEeCCceeeec
Confidence 11 333344446888654 2244444 3899999999998
Q ss_pred CCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 345 YGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 345 ~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
++..+|+++.|||||||||++ ++|| |+||++|++||+||++||++|+++++.
T Consensus 394 ----i~~~t~~~~~i~GLy~aGEv~--~v~g--~~GG~~l~~a~~~G~~Ag~~aa~~~~~ 445 (447)
T 2i0z_A 394 ----INPKEMSSKFTNGLYFCGEVL--DIHG--YTGGYNITSALVTGRIAGTTAGENAKM 445 (447)
T ss_dssp ----EETTTTEESSSBTEEECGGGB--SCBC--CTTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ----ccccccccCcCCCEEEEEeec--cCcc--CCCcHHHHHHHHHHHHHHHHHHHhhhh
Confidence 677777778999999999999 4898 899999999999999999999988753
No 19
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=99.96 E-value=1.1e-29 Score=284.65 Aligned_cols=188 Identities=17% Similarity=0.308 Sum_probs=164.6
Q ss_pred cccccCCCCcCCCCCcceeEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccccc-
Q psy9575 556 TVKTVHPKKHHDIKPYMQKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNEL- 634 (786)
Q Consensus 556 ~v~~~~p~~r~~~~~~~~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~- 634 (786)
+|+||+|+. +.+|||++|+|+++++ +||||||.+|+ +|+|+. ||+|.|||+++|| .|.+++.
T Consensus 28 ~i~R~~p~~--~~~p~~~~y~v~~~~~-~~vLd~L~~ik-----~l~fr~--------sCam~ING~~~la-~t~~~~~~ 90 (514)
T 3kwl_A 28 KVFRFETNK--DYNPAYESYFLEYQED-QYLLDLLKQLK-----GVSYSE--------NIALKINQIAVFE-DAKVSDLV 90 (514)
T ss_dssp EEEECBTTS--CSCCEEEEEEEECCTT-CBHHHHHTTST-----TCCCCS--------SCCEEETTEEECS-CCBHHHHH
T ss_pred EEEEeCCCC--CCCCceEEEEEeCCCC-CcHHHHHHHhh-----hCeeec--------cceEEECCEehhh-hhhHHHHh
Confidence 499999975 6699999999999887 89999999987 788775 6999999999999 6666553
Q ss_pred ---CcceEECCCCCCCceeeeeecchHhHHhcccc---cceeecCCCCCcccccCChhHHHhhhchhhCcccCcccCCCC
Q psy9575 635 ---KQPIIIRPLPGLPVIRDLVVDMTLFFKQFNSI---KPFLITNNNPPEKERLQSPSQRKILDGLYECILCGCCSTACP 708 (786)
Q Consensus 635 ---~~~~~i~p~~~~~~~~dL~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP 708 (786)
...++|+||++||++|||++|++.|+++++.+ +||+. +++++.++.. | .|+.+||
T Consensus 91 ~~~~~~i~iePl~~~pvikDLvvD~~~f~~~~~~i~~~~p~~~-------------~~~~~~~~~~---~---~C~~aCp 151 (514)
T 3kwl_A 91 AFFSKEWVLDPLSKRYALKDLMIDEKAVLKNYEDFFKQVPYIT-------------KGEKEELEKF---I---QINFINP 151 (514)
T ss_dssp HHHCSEEEEECSCSTTEEETTEECHHHHHGGGHHHHHTCTTSC-------------HHHHHGGGGT---G---GGGGTCC
T ss_pred hccCCcEEEEECCCCcccccceeccHHHHHHHHHhhcCCCCCC-------------HHHHHHHhhc---C---hhhccCC
Confidence 46899999999999999999999999999998 99973 4566666644 4 9999999
Q ss_pred CcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhc-cCCCccccccccccchhhCCCCCChHHHHHHHHHHHHHhc
Q psy9575 709 SFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNL-EDPYRLFRCRSIMNCVDTCPKGLNPNRSINKIKELMIYRI 785 (786)
Q Consensus 709 ~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~ 785 (786)
+. + .+|+||+++.+++|+..|+|+... +++..+ +...++|.|++| |+++||++|++.+.|.+||+.+++++
T Consensus 152 ~~--~-~~f~Gpa~l~~a~r~~~d~rd~~~-~rl~~l~~~~~gv~~C~~~--C~~~CPk~i~~~~~I~~lr~~~~~~~ 223 (514)
T 3kwl_A 152 QT--N-PKYLGDGFFLYVKWLMKRYPTERD-RLLEMISQPESGVMNFLSV--AHYLYKNDDNIDHEIYELQEILTNSK 223 (514)
T ss_dssp CC--C-TTCCCHHHHHHHHHHHHHCGGGHH-HHHHHTCCTTTSGGGCCCC--GGGBTTCCCHHHHHHHHHHHHHHTSS
T ss_pred CC--C-cccCcHHHHHHHHHHhcCCcchHH-HHHHHhhcCcccccccccc--ccccCCCCCCHHHHHHHHHHHHHHhC
Confidence 95 4 569999999999999999999887 788776 566799999999 99999999999999999999888753
No 20
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.87 E-value=6.7e-22 Score=217.60 Aligned_cols=333 Identities=17% Similarity=0.154 Sum_probs=189.7
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||+.|+++|.+|+|+||....++....++||.+...+. ...+..++ ....... ...+..+ ...+.++|+
T Consensus 17 l~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~--~~~~~~~~----~~~~~~~-~~~l~~~--~~~~~~~~~ 87 (401)
T 2gqf_A 17 LFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNL--EVTPAHYL----SQNPHFV-KSALARY--TNWDFISLV 87 (401)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEES--SCCGGGEE----CSCTTST-HHHHHHS--CHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCC--ccCHHHhc----cCCHHHH-HHHHHhC--CHHHHHHHH
Confidence 5799999999999999999887666666677776543322 11211110 0011111 1111111 234678899
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeec----CCC
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISD----SEG 156 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~----~~g 156 (786)
.++|+++.....|.+ ++.+ .+..+...|.+.+++.||++++++.++++..+ + +
T Consensus 88 ~~~Gi~~~~~~~g~~---------------------~p~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~-~ 144 (401)
T 2gqf_A 88 AEQGITYHEKELGQL---------------------FCDE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK-V 144 (401)
T ss_dssp HHTTCCEEECSTTEE---------------------EETT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS-C
T ss_pred HhCCCceEECcCCEE---------------------ccCC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC-C
Confidence 999999865433222 1222 45688999999999999999999999999876 4 4
Q ss_pred CEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCCC--ccccccccccCC-CCc
Q psy9575 157 DILGVVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDME--FWQFHPTGVAGA-GVL 233 (786)
Q Consensus 157 ~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e--~~q~~p~~~~~~-~~~ 233 (786)
.+ .+.. .+| .++|+.||+|||+++. ...+++|||+.+|.++|+.+..+. .++|..+..... ..+
T Consensus 145 ~~-~v~~---~~g---~i~ad~VVlAtG~~s~------p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l 211 (401)
T 2gqf_A 145 RF-VLQV---NST---QWQCKNLIVATGGLSM------PGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTAL 211 (401)
T ss_dssp CE-EEEE---TTE---EEEESEEEECCCCSSC------GGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGG
T ss_pred eE-EEEE---CCC---EEECCEEEECCCCccC------CCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccC
Confidence 42 3322 344 5899999999999883 345789999999999999886542 333331100000 000
Q ss_pred cccccccCCcEEEcCCCCcccc-ccC-CccCCCCchhHHHHHHHHHHHhcCCCCCCCCeEEEeCC-CCChhHHHh-----
Q psy9575 234 ITEGVRGEGGILINSNGERFME-RYA-PILKDLAPRDFVSRAMDQEIKEGRGCGPNKDHVMLDLR-HINSETIIN----- 305 (786)
Q Consensus 234 ~~~~~~~~g~~~vn~~G~rf~~-~~~-p~~~~~~~~~~~~~~i~~~~~~g~g~~~~~~~v~ld~~-~~~~~~~~~----- 305 (786)
.+..-+..+.+. |+++.. +.- .+.+ + ...+.-.+...+.. + ..+.+|+- ..+.+.+..
T Consensus 212 --~g~~~~~~~~i~--G~~~~~g~~l~t~~g-~--sG~~~l~~s~~~~~--~-----~~~~i~~~p~~~~~~~~~~~~~~ 277 (401)
T 2gqf_A 212 --SGISLPVTITAL--CGKSFYNQLLFTHRG-I--SGPAVLQISNYWQP--T-----ESVEIDLLPNHNVEEEINQAKQS 277 (401)
T ss_dssp --TTCEEEEEEEET--TSCEEEEEEEECSSE-E--ESHHHHHHTTTCCT--T-----CCEEEESCSSSCHHHHHHHHHHH
T ss_pred --CCeeeeeEEEEc--CCceEEeCEEEECCC-c--cHHHHHHHHHHHhc--C-----CEEEEECCCCCCHHHHHHHHhhh
Confidence 000101112221 221110 000 0000 0 00000000000000 1 12444431 222222210
Q ss_pred ------------Hch-hHHHHHHhhcCCCCC------C-C---------Ceeeee-------cccccccCcccCCCCccc
Q psy9575 306 ------------RLP-SILEIGNKFANVNAL------K-E---------PIPVIP-------TIHYQMGGIPTNIYGQVI 349 (786)
Q Consensus 306 ------------~~~-~~~~~~~~~~g~d~~------~-~---------~i~v~p-------~~~~t~GGi~vd~~~~vl 349 (786)
.+| .+.....+..|++.. + + .+++.+ .++.|.|||.+++ +
T Consensus 278 ~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GGv~~~~----~ 353 (401)
T 2gqf_A 278 SPKQMLKTILVRLLPKKLVELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVTMGGVDTKV----I 353 (401)
T ss_dssp CTTSBHHHHHTTTSCHHHHHHHHHTTSSCCCBGGGCCHHHHHHHHHHHHCEEECCSEECCTTTCSEEEEEECGGG----B
T ss_pred cccccHHHHhhhhcCHHHHHHHHHHcCCCCCchhhCCHHHHHHHHHHHhcCEEEecccCCcceeEEeCCcccccc----C
Confidence 111 112212222355510 0 0 022222 2456999999988 8
Q ss_pred ccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 350 IPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 350 ~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
|+++|+++.+||||+|||++ +++| ++||++|.+||++|++||++|++
T Consensus 354 ~~~tmes~~~~gly~~GE~l--dv~g--~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 354 SSKTMESNQVSGLYFIGEVL--DVTG--WLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp CTTTCBBSSSTTEEECGGGB--SCEE--CTTTHHHHHHHHHHHHHHHHHHT
T ss_pred ChhhccccCCCCEEEEEEeE--Eecc--CCCCHHHHHHHHHHHHHHHHHhc
Confidence 88899999999999999999 8998 69999999999999999999864
No 21
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.81 E-value=5.7e-20 Score=202.80 Aligned_cols=172 Identities=15% Similarity=0.243 Sum_probs=118.5
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||+.|++.|.+|+|+||....++....++||.+...+. ...+..++. ....... .....+ ...+.++|+
T Consensus 40 l~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~--~~~~~~~~~----~~~~~~~-~~l~~~--~~~~~~~~~ 110 (417)
T 3v76_A 40 MMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNI--HASPRNFLS----GNPHFCK-SALARY--RPQDFVALV 110 (417)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEET--TCSGGGEEE----SSTTTTH-HHHHHS--CHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCC--CCCHHHHhh----cCHHHHH-HHHHhc--CHHHHHHHH
Confidence 5799999999999999999988777777777776654332 111111100 0011111 111111 234677889
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILG 160 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G 160 (786)
+++|+++.....|.++ . ......+.+.|.+.+++.||+|+++++|+++..++ +. +.
T Consensus 111 ~~~Gi~~~~~~~g~~~---------------------~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~-~~-~~ 166 (417)
T 3v76_A 111 ERHGIGWHEKTLGQLF---------------------C-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA-SG-FR 166 (417)
T ss_dssp HHTTCCEEECSTTEEE---------------------E-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TE-EE
T ss_pred HHcCCCcEEeeCCEEe---------------------e-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CE-EE
Confidence 9999988765443322 1 23456889999999999999999999999998875 43 23
Q ss_pred EEEEEcCCCcEEEEEeCeEEEcCCCCCccCccCcccCCCchHHHHHHHHCCCCccCC
Q psy9575 161 VVALEMETGNIMILESKITILATGGGGRIWAASTNAFINTGDGLGMAARAGLPLEDM 217 (786)
Q Consensus 161 ~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~ 217 (786)
+.. .+| .++|+.||+|||+++ .+..+.+|+|+.++..+|..+..+
T Consensus 167 V~~---~~g---~i~ad~VIlAtG~~S------~p~~gs~g~g~~la~~~G~~i~~~ 211 (417)
T 3v76_A 167 VTT---SAG---TVDAASLVVASGGKS------IPKMGATGLAYRIAEQFGLPVVET 211 (417)
T ss_dssp EEE---TTE---EEEESEEEECCCCSS------CGGGTCCCHHHHHHHHTTCCEEEE
T ss_pred EEE---CCc---EEEeeEEEECCCCcc------CCCCCCCcHHHHHHHHCCCCEecc
Confidence 322 444 689999999999987 345578999999999999987654
No 22
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=99.66 E-value=5.5e-18 Score=200.92 Aligned_cols=65 Identities=17% Similarity=0.237 Sum_probs=53.0
Q ss_pred EEEcCCCChhHHHHHHHchhccCCCcccc-cCCCCCcccceEEEeCC-----------------------cccccccccc
Q psy9575 576 LVNLSSNDKMLLDALHRIKYDIDDSLTLR-RSCREGVCGSDAMNING-----------------------KNGLACITNL 631 (786)
Q Consensus 576 ~v~~~~~~~tiL~al~~~~~~~~~~l~~~-~~Cr~g~Cg~C~V~vnG-----------------------~~~laC~t~v 631 (786)
+|++++| +|||+|++++|++ +|++||+ ..|+.|.||+|+|+|+| ++.+||.|+|
T Consensus 10 ~~~v~~g-~til~a~~~~gi~-ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~~~~~~~aC~t~v 87 (783)
T 3i9v_3 10 IVEVPPG-TSVMDAVFHAGYD-VPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQPKLAASCVTAV 87 (783)
T ss_dssp EEEECTT-CBHHHHHHHTTCC-CCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCBCSSCEETTTCBC
T ss_pred EEEeCCC-ChHHHHHHHhCCC-ccccCCCCCCCCCcccCCcEEEecccccccccccccccccccccccCCCcccccCCCC
Confidence 4566676 8999999999994 7999996 44567999999999964 3556999999
Q ss_pred cccCcceEECC
Q psy9575 632 NELKQPIIIRP 642 (786)
Q Consensus 632 ~~~~~~~~i~p 642 (786)
.+||.+.|.+|
T Consensus 88 ~~gm~v~t~~~ 98 (783)
T 3i9v_3 88 ADGMVVDTLSD 98 (783)
T ss_dssp CSSEEEESSSH
T ss_pred CCCCEEEECCH
Confidence 99987766554
No 23
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=99.62 E-value=5.9e-16 Score=144.91 Aligned_cols=133 Identities=17% Similarity=0.262 Sum_probs=101.2
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccc--cCcceEECCCCCCCceee
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNE--LKQPIIIRPLPGLPVIRD 651 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~--~~~~~~i~p~~~~~~~~d 651 (786)
+|+++++++ +|||++|+++. +.+.++.+|+.|+||+|.|.|||++++||.|++.+ |+++.|+||+.+++.
T Consensus 13 ~~~v~~~~~-~tLL~~Lr~~~----gl~g~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~~~G~~v~TiEgL~~~~~--- 84 (161)
T 1rm6_C 13 AREDLVPDN-MLLLDYLRETV----GLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGT--- 84 (161)
T ss_dssp EEEEEEETT-CBHHHHHHHTT----CCTTSCCCSSSSSSCTTEEEETTEEEEGGGSBGGGGTTSEEECGGGSSBTTB---
T ss_pred EEEEecCCc-CcHHHHHHHcC----CCcccccCCCCCCCCCCEEEECCcEEechHHHHHHhCCceEEEECCCCCCCc---
Confidence 567777776 89999999852 34577889999999999999999999999999988 788899999976553
Q ss_pred eeecchHhHHhcccccceeecCCCCCcccccCChhHHHhhhchhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhh
Q psy9575 652 LVVDMTLFFKQFNSIKPFLITNNNPPEKERLQSPSQRKILDGLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFIS 731 (786)
Q Consensus 652 L~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~ 731 (786)
.++ ...... ...+++||.|... .++.+++++.
T Consensus 85 ----~~p---------------------------~q~a~~--~~~~~qCG~Ctpg---------------~im~a~~ll~ 116 (161)
T 1rm6_C 85 ----LSK---------------------------LQAAFH--EKLGTQCGFCTPG---------------MIMASEALLR 116 (161)
T ss_dssp ----CCH---------------------------HHHHHH--HHTCCSSCSSHHH---------------HHHHHHHHHH
T ss_pred ----cCH---------------------------HHHHHH--HhCCCcCCCCchH---------------HHHHHHHHHh
Confidence 111 111122 2467999998853 4778888888
Q ss_pred cCcchhhHHHhhhccCCCccccccccccchhhC
Q psy9575 732 DSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTC 764 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vC 764 (786)
+.++. .++++.... +.+++.|+.+..|+++|
T Consensus 117 ~~~~p-t~~~i~~~l-~gnlcRCtgy~~i~~A~ 147 (161)
T 1rm6_C 117 KNPSP-SRDEIKAAL-AGNLCRCTGYVKIIKSV 147 (161)
T ss_dssp HCSSC-CHHHHHHHT-TTCCCSSSCSHHHHHHH
T ss_pred cCCCC-CHHHHHHHH-cCCeECCCCCHHHHHHH
Confidence 88774 344444433 24899999999999987
No 24
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=99.61 E-value=1.2e-15 Score=144.48 Aligned_cols=134 Identities=19% Similarity=0.298 Sum_probs=99.2
Q ss_pred eeEEEEcCCCChhHHHHHHHc-hhccCCCcccccCCCCCcccceEEEeCCcccccccccccc--cCcceEECCCCCCCce
Q psy9575 573 QKFLVNLSSNDKMLLDALHRI-KYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNE--LKQPIIIRPLPGLPVI 649 (786)
Q Consensus 573 ~~~~v~~~~~~~tiL~al~~~-~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~--~~~~~~i~p~~~~~~~ 649 (786)
+.++++++++ +|||++|++. ++. .+..+|+.|+||+|.|+|||++++||.|++.+ |+.+.|+||+.+++.
T Consensus 19 ~~~~~~v~~~-~tlL~~Lr~~~gl~-----g~~~~C~~G~CGaC~V~vdG~~v~sC~~~~~~~~G~~v~Tiegl~~~~~- 91 (168)
T 1t3q_A 19 KPRVFYVEPR-MHLADALREVVGLT-----GTKIGCEQGVCGSCTILIDGAPMRSCLTLAVQAEGCSIETVEGLSQGEK- 91 (168)
T ss_dssp EEEEEEECTT-SBHHHHHHHTTCCT-----TSCCSCSSSSSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGTCCSSS-
T ss_pred EEEEEecCCC-CcHHHHHHhcCCCC-----ccccCCCCCCCCCcEEEECCCEeechhhHHHHhCCCeEEEEcCCCCccc-
Confidence 3567777776 8999999984 442 36678999999999999999999999999998 788999999976541
Q ss_pred eeeeecchHhHHhcccccceeecCCCCCcccccCChhHHHhhhchhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHH
Q psy9575 650 RDLVVDMTLFFKQFNSIKPFLITNNNPPEKERLQSPSQRKILDGLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRF 729 (786)
Q Consensus 650 ~dL~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~ 729 (786)
+++. .. .+. ...+++||.|. |..++.++.+
T Consensus 92 ------~~~~---------------------------q~-a~~-~~~~~qCG~C~---------------pg~i~~a~~l 121 (168)
T 1t3q_A 92 ------LNAL---------------------------QD-SFR-RHHALQCGFCT---------------AGMLATARSI 121 (168)
T ss_dssp ------CCHH---------------------------HH-HHH-HTTCCSSCSSH---------------HHHHHHHHHH
T ss_pred ------cCHH---------------------------HH-HHH-HhCCCcCCCch---------------HHHHHHHHHH
Confidence 1111 11 111 35679999988 6667888888
Q ss_pred hhcCcchhhHHHhhhccCCCccccccccccchhhCC
Q psy9575 730 ISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCP 765 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP 765 (786)
+.+.++...++....+ ..+++.|+.|+.|+++|-
T Consensus 122 l~~~~~p~~~~i~~~l--~gnlcRCt~y~~~v~A~~ 155 (168)
T 1t3q_A 122 LAENPAPSRDEVREVM--SGNLCRCTGYETIIDAIT 155 (168)
T ss_dssp HHHCSSCCHHHHHHHG--GGSCCSSSCSHHHHHHHT
T ss_pred HhcCCCCCHHHHHHHH--cCCcccCCCchHHHHHHH
Confidence 7676654333222223 257899999999999994
No 25
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=99.58 E-value=2.8e-17 Score=187.54 Aligned_cols=68 Identities=13% Similarity=0.097 Sum_probs=59.1
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCC-C-CCcccceEEEeCCc-ccccccccccccCcceEECCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSC-R-EGVCGSDAMNINGK-NGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~C-r-~g~Cg~C~V~vnG~-~~laC~t~v~~~~~~~~i~p~ 643 (786)
..+|+++++ +|||+||+++|+ .+|++|++.+| . .|.||+|+|+|||. +++||.|++.+||.+.|.++.
T Consensus 8 g~~v~v~~g-~tiL~a~~~~gi-~ip~lC~~~~~~~~~G~Cg~C~V~v~g~~~~~aC~t~v~~gm~V~T~~~~ 78 (574)
T 3c8y_A 8 GVQFNTDED-TTILKFARDNNI-DISALCFLNNCNNDINKCEICTVEVEGTGLVTACDTLIEDGMIINTNSDA 78 (574)
T ss_dssp TEEEEECCC-CBHHHHHHHTTC-CCCCSSCBTTBCCSSSCCCTTEEEETTTEEEEGGGCBCCTTCEEESSCHH
T ss_pred CEEEEeCCC-CHHHHHHHHcCC-CCCcccCCCCCCCCcccCCCCEEEeCCCcccccCCCCcccceeEEecchh
Confidence 345667776 899999999998 48999998777 6 89999999999998 788999999999988887776
No 26
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.45 E-value=2.8e-13 Score=154.30 Aligned_cols=168 Identities=17% Similarity=0.152 Sum_probs=96.7
Q ss_pred ChHhhhcHhCCCCEEEEEecC--CCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVF--PTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVY 78 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~--~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~ 78 (786)
++||+.||+.|.+|+|+|+.. .+..++..+.||+. ..++.+.+....++ ...
T Consensus 34 l~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia-----------~~~lv~el~al~g~---------------~~~ 87 (641)
T 3cp8_A 34 CEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVA-----------KGQITREIDALGGE---------------MGK 87 (641)
T ss_dssp HHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHH-----------HHHHHHHHHHHTCS---------------HHH
T ss_pred HHHHHHHHHCCCcEEEEEecccccCCCccccchhhhh-----------HHHHHHHHHhcccH---------------HHH
Confidence 479999999999999999973 32222223344332 11222222221111 112
Q ss_pred HHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcC-CceEEeceEEEeeeecCCCC
Q psy9575 79 ELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHA-KTNFFIEWMAIDLISDSEGD 157 (786)
Q Consensus 79 ~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~-Gv~i~~~~~v~~L~~~~~g~ 157 (786)
++...|++|.....+. ..+. ..+|. ..+ ...+...|.+.+++. |++++. ..|++|..++ ++
T Consensus 88 ~~d~~gi~f~~l~~~k-----gpav-------~~~r~--~~D--r~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~-g~ 149 (641)
T 3cp8_A 88 AIDATGIQFRMLNRSK-----GPAM-------HSPRA--QAD--KTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANS-GK 149 (641)
T ss_dssp HHHHHEEEEEEECSSS-----CTTT-------CEEEE--EEC--HHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEET-TE
T ss_pred HHHhcCCchhhccccc-----Cccc-------cchhh--hcC--HHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecC-CE
Confidence 3445677775432211 0011 11221 222 236778888888874 999965 5899999886 88
Q ss_pred EEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc--Cc-cCcccCCCc-hHHHHHHH-----HCCCCccCC
Q psy9575 158 ILGVVALEMETGNIMILESKITILATGGGGRI--WA-ASTNAFINT-GDGLGMAA-----RAGLPLEDM 217 (786)
Q Consensus 158 v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~--~~-~~~~~~~~t-Gdg~~~a~-----~aGa~l~~~ 217 (786)
|.|+.+ .+|. .|.|+.||+|||++.+. |. ..+++.+.+ |++.++++ ++|..+..|
T Consensus 150 V~GV~t---~~G~--~i~Ad~VVLATG~~s~~~i~~G~~~~~~g~~vG~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 150 FSSVTV---RSGR--AIQAKAAILACGTFLNGLIHIGMDHFPGGRSTAEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp EEEEEE---TTSC--EEEEEEEEECCTTCBTCEEEETTEEEECSSSTTSCCBCSHHHHHHHTTCCEEEE
T ss_pred EEEEEE---CCCc--EEEeCEEEECcCCCCCccceeeeeeeccccccCCchhhhhHHHHHhCCceEEee
Confidence 998876 4664 68999999999998653 21 122222233 44443333 678877654
No 27
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.25 E-value=6.5e-10 Score=125.83 Aligned_cols=59 Identities=20% Similarity=0.302 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++.|++|++++.|++|..++ +++.|+.+ .+|+ .+.|+.||+|+|..++
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~l---~~G~--~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTL---SNGE--EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEEE---TTSC--EEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEEE---CCCC--EEECCEEEECCCCChh
Confidence 5688899999999999999999999999886 88888876 5665 5899999999998774
No 28
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=99.22 E-value=2.3e-11 Score=113.30 Aligned_cols=132 Identities=17% Similarity=0.303 Sum_probs=89.9
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccc--ccCcceEECCCCCCCceee
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLN--ELKQPIIIRPLPGLPVIRD 651 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~--~~~~~~~i~p~~~~~~~~d 651 (786)
+|+++++++ +|||++|++. .+...+..+|+.|.||+|.|.|||++++||.|++. +|+++.|+|++....
T Consensus 14 ~~~~~v~~~-~tLLd~LR~~----lgltg~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~~~G~~I~TiEgL~~~~---- 84 (163)
T 1ffv_A 14 AQEKAVEPR-TLLIHFLREE----LNLTGAHIGCETSHCGACTVDIDGRSVKSCTHLAVQCDGSEVLTVEGLANKG---- 84 (163)
T ss_dssp EEEEEECTT-CBHHHHHHHT----SCCTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGTSBTT----
T ss_pred EEEEecCCC-CcHHHHHHhc----CCCcccccCCCCCCCCCCEEEECCcEecchHhhHHHhCCceEEEECCCCCCC----
Confidence 567777776 8999999983 23456778999999999999999999999999998 667788999995422
Q ss_pred eeecchHhHHhcccccceeecCCCCCcccccCChhHHHhhhchhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhh
Q psy9575 652 LVVDMTLFFKQFNSIKPFLITNNNPPEKERLQSPSQRKILDGLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFIS 731 (786)
Q Consensus 652 L~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~ 731 (786)
.++++.+ ... ...-++||.|.. ..++.+..++.
T Consensus 85 ---~l~pvq~---------------------------a~~--~~~~~QCG~Ctp---------------G~imsa~all~ 117 (163)
T 1ffv_A 85 ---VLHAVQE---------------------------GFY--KEHGLQCGFCTP---------------GMLMRAYRFLQ 117 (163)
T ss_dssp ---BCCHHHH---------------------------HHH--HTTCCSSCSSHH---------------HHHHHHHHHHH
T ss_pred ---CcCHHHH---------------------------HHH--HhCCccCccccH---------------hHHHHHHHHHH
Confidence 1122111 111 234589999864 23556666665
Q ss_pred cCcchhhHHHhhhccCCCccccccccccchhh
Q psy9575 732 DSRDEATNFRLDNLEDPYRLFRCRSIMNCVDT 763 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~v 763 (786)
+.++...+ .+.... +.++-+|+....+.++
T Consensus 118 ~~~~pt~~-ei~~~l-~gnlCRCtgY~~I~~A 147 (163)
T 1ffv_A 118 ENPNPTEA-EIRMGM-TGNLCRCTGYQNIVKA 147 (163)
T ss_dssp HCSSCCHH-HHHHHT-TTCCCSSSCSHHHHHH
T ss_pred cCCCCCHH-HHHHHH-cCCccCCCCCHHHHHH
Confidence 55543333 333322 2467889888776654
No 29
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=99.18 E-value=5.4e-11 Score=111.14 Aligned_cols=133 Identities=12% Similarity=0.254 Sum_probs=89.7
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccc--ccCcceEECCCCCCCceee
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLN--ELKQPIIIRPLPGLPVIRD 651 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~--~~~~~~~i~p~~~~~~~~d 651 (786)
.|+++++++ +|||++|++. .+...+..+|+.|.||+|.|.|||++++||.|++. +|+++.|+|++.... +
T Consensus 14 ~~~~~v~~~-~tLLd~LR~~----lgl~g~k~gC~~G~CGaCtV~vdG~~v~SC~~~~~~~~G~~V~TiEgL~~~~---~ 85 (166)
T 1n62_A 14 PVEALVEPR-TLLIHFIREQ----QNLTGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQANGASITTIEGMAAPD---G 85 (166)
T ss_dssp EEEEEECTT-CBHHHHHHHT----SCCTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGSSCTT---S
T ss_pred EEEEecCCC-CcHHHHHHHc----CCCCccccCCCCCCCCCCEEEECCcEEechhhhHHHhCCceEEEeCCCCCcC---C
Confidence 567777776 8999999983 23456778999999999999999999999999997 567788999995421 1
Q ss_pred eeecchHhHHhcccccceeecCCCCCcccccCChhHHHhhhchhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhh
Q psy9575 652 LVVDMTLFFKQFNSIKPFLITNNNPPEKERLQSPSQRKILDGLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFIS 731 (786)
Q Consensus 652 L~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~ 731 (786)
.++++.+ .+. ...-++||.|.. ..++.+..++.
T Consensus 86 ---~~~pvq~----------------------------a~~-~~~~~QCG~Ctp---------------G~imsa~all~ 118 (166)
T 1n62_A 86 ---TLSALQE----------------------------GFR-MMHGLQCGYCTP---------------GMIMRSHRLLQ 118 (166)
T ss_dssp ---CCCHHHH----------------------------HHH-HTTCCSSCSSHH---------------HHHHHHHHHHH
T ss_pred ---ccCHHHH----------------------------HHH-HcCCccCCccch---------------hHHHHHHHHHH
Confidence 1122111 111 234589999864 23556666665
Q ss_pred cCcchhhHHHhhhccCCCccccccccccchhh
Q psy9575 732 DSRDEATNFRLDNLEDPYRLFRCRSIMNCVDT 763 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~v 763 (786)
+.++...+ .+.... +.++-+|+....+.++
T Consensus 119 ~~~~pt~~-eI~~~l-~gNlCRCtgY~~I~~A 148 (166)
T 1n62_A 119 ENPSPTEA-EIRFGI-GGNLCRCTGYQNIVKA 148 (166)
T ss_dssp HCSSCCHH-HHHHHT-TTCCCSSSTTHHHHHH
T ss_pred cCCCCCHH-HHHHHH-cCCccCCCCCHHHHHH
Confidence 55543333 333222 2467889888776654
No 30
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.17 E-value=1.4e-10 Score=131.61 Aligned_cols=87 Identities=14% Similarity=0.074 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccCc---cCcccCCC
Q psy9575 124 HALLHTLYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRIWA---ASTNAFIN 199 (786)
Q Consensus 124 ~~i~~~L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~~---~~~~~~~~ 199 (786)
..+...|.+.+++ .|++|+ ++.|++|+.++ ++|.|+.+ .+|. .|.|+.||+|||++.+... ....+.+.
T Consensus 123 ~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~-g~V~GV~t---~dG~--~i~AdaVVLATG~~s~~~~~~G~~~~~~Gr 195 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYIK-QEEVVDIIVKN-NQVVGVRT---NLGV--EYKTKAVVVTTGTFLNGVIYIGDKMIPGGR 195 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ESCEEEEEESS-SBEEEEEE---TTSC--EEECSEEEECCTTCBTCEEEETTEEEECSB
T ss_pred HHHHHHHHHHHHhCCCCEEE-EeEEEEEEecC-CEEEEEEE---CCCc--EEEeCEEEEccCCCccCceeccceecCCCC
Confidence 5678888888888 599995 67999999886 89999877 5664 6899999999999976421 12233444
Q ss_pred chHHHHH-----HHHCCCCccCC
Q psy9575 200 TGDGLGM-----AARAGLPLEDM 217 (786)
Q Consensus 200 tGdg~~~-----a~~aGa~l~~~ 217 (786)
.|++.++ ..++|..+..+
T Consensus 196 ~G~~~A~~la~~L~~lG~~v~~l 218 (637)
T 2zxi_A 196 LGEPRSEGLSDFYRRFDFPLIRF 218 (637)
T ss_dssp TTBCCBCTHHHHHHHTTCCCEEE
T ss_pred CCchhHHHHHHHHHhcCCceEEe
Confidence 5543332 23678776544
No 31
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.11 E-value=2e-09 Score=122.65 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 124 HALLHTLYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 124 ~~i~~~L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
..+...|.+.+++ .|++|+ ++.|++|+.++ ++|+|+.+ .+| ..|.|+.||+|||+++..
T Consensus 124 ~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~-g~V~GV~t---~dG--~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMIF-QQAVEDLIVEN-DRVVGAVT---QMG--LKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEESS-SBEEEEEE---TTS--EEEEEEEEEECCSTTTCC
T ss_pred HHHHHHHHHHHHhCCCCEEE-EEEEEEEEecC-CEEEEEEE---CCC--CEEECCEEEEcCCCCccC
Confidence 4677888888888 699995 67999999886 88999876 456 368999999999999764
No 32
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.74 E-value=4e-09 Score=119.57 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=31.8
Q ss_pred HHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 129 TLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 129 ~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.....+++.||+++.+..- ++ +. ++|. +...+ ..+....++|+.+|||||+...
T Consensus 145 ~~~~~l~~~~V~~i~G~a~--f~-~~-~~v~-V~~~~-~~~~~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 145 SYMTGLRSSKVKYINGLAK--LK-DK-NTVS-YYLKG-DLSKEETVTGKYILIATGCRPH 198 (542)
T ss_dssp HHHHHHHHTTCEEECEEEE--EE-ET-TEEE-EEEC---CCCEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHhCCCEEEeeeEE--Ec-CC-Ccce-Eeecc-cCCceEEEeeeeEEeccCCCCC
Confidence 3444566789999876532 22 22 3321 21111 2234567999999999998764
No 33
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=98.71 E-value=7.6e-09 Score=95.62 Aligned_cols=67 Identities=22% Similarity=0.316 Sum_probs=55.0
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccc--ccCcceEECCCCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLN--ELKQPIIIRPLPG 645 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~--~~~~~~~i~p~~~ 645 (786)
.++++++++ +|||++|+.. ..-..+..+|+.|.||+|.|.|||++++||.+++. +|.++.|||++..
T Consensus 14 ~~~v~v~p~-~tLLd~LR~~----lgltgtk~gC~~G~CGACtV~vdG~~v~sC~~~~~~~~G~~I~TiEgl~~ 82 (160)
T 3hrd_D 14 ARSIVTEPN-KRLLDLLRED----FGLTSVKEGCSEGECGACTVIFNGDPVTTCCMLAGQADESTIITLEGVAE 82 (160)
T ss_dssp EEEEEECSS-SBHHHHHHTT----SCCTTSCCSSSSSSSCTTEEEETTEEEEGGGSBGGGGTTEEEECGGGTSB
T ss_pred EEEEecCCC-CCHHHHHHHh----cCCCccccccCCCCCCCCEEEECCEEEEchhhhhhhhCCCceEEeCCCCC
Confidence 566777776 8999999862 22346778899999999999999999999999997 4567788998843
No 34
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.66 E-value=4.8e-09 Score=122.75 Aligned_cols=173 Identities=16% Similarity=0.198 Sum_probs=99.0
Q ss_pred hhHHHHHHHchhc-cCCCc--ccc------cC---------------------CCCCcccceEEEeCCcc-cc--ccccc
Q psy9575 584 KMLLDALHRIKYD-IDDSL--TLR------RS---------------------CREGVCGSDAMNINGKN-GL--ACITN 630 (786)
Q Consensus 584 ~tiL~al~~~~~~-~~~~l--~~~------~~---------------------Cr~g~Cg~C~V~vnG~~-~l--aC~t~ 630 (786)
.++||+++++++. .++.+ ++. .. -..|.|+.|+|++|+.. .+ +|.
T Consensus 256 ~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~i~tGa~dv~vV~~n~i~~~ll~~a~-- 333 (807)
T 3cf4_A 256 TYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKVIRSGMPDVIVVDEQCVRGDIVPEAQ-- 333 (807)
T ss_dssp HHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHHHHHTCCSEEEECSSSCCTTHHHHHH--
T ss_pred HHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHHhhcCCCeEEEEEecCCChHHHHHHH--
Confidence 3799999998775 34445 221 00 23688999999999973 22 554
Q ss_pred ccccCcceEECCCCC--CCcee------------------eeeecchHhHH---hc-ccccceeecCCCCCcccccCChh
Q psy9575 631 LNELKQPIIIRPLPG--LPVIR------------------DLVVDMTLFFK---QF-NSIKPFLITNNNPPEKERLQSPS 686 (786)
Q Consensus 631 v~~~~~~~~i~p~~~--~~~~~------------------dL~~d~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~ 686 (786)
+.|+.++++.|... .|... -+.++...+.+ ++ ....++-... .....+.
T Consensus 334 -~~Gm~Vit~sp~~~~Grpd~~d~~~~~~le~LLs~~~~~~l~~g~~~~~elai~~a~~~~p~r~~~------~~~~i~~ 406 (807)
T 3cf4_A 334 -KLKIPVIASNPKIMYGLPNRTDADVDETMEELKSGKIPGCVMLDYDKLGELCVRLTMEMAPIRDAA------GITALPT 406 (807)
T ss_dssp -HTTCCEEECSTTCCTTCCBCTTSCHHHHHHHHHTTSSSEEECCCHHHHHHHHHHHHHHHHHHHHHT------TCCCSCC
T ss_pred -HCCCEEEEechhhhcCCCccccchHHHHHHHHHhCCCCCceeeCCccHHHHHHHHHhhccCCcccc------ccccccc
Confidence 57888999998842 32110 11122111111 00 0000110000 0001122
Q ss_pred HHHhhhchhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCC
Q psy9575 687 QRKILDGLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPK 766 (786)
Q Consensus 687 ~~~~~~~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~ 766 (786)
......+.++|+.||+|+.+||.+. .+.. .++....++.. ... ...+.|+.||+|..+||+
T Consensus 407 ~~~i~~~~~~Ci~CG~C~~~CP~~~-------~~~~---il~~~~~G~~~----~~~-----~~~~~Ci~Cg~C~~vCP~ 467 (807)
T 3cf4_A 407 DEELVNMVAKCADCGACLLACPEEI-------DIPE---AMGFAKKGDFS----YFE-----EIHDTCIGCRRCEQVCKK 467 (807)
T ss_dssp HHHHHHHHHHCCCCCHHHHHCTTCC-------CHHH---HHHHHHTTCTH----HHH-----HHHHHCCCCCHHHHHCTT
T ss_pred cHHHHHhHHhCCCCCchhhhCCCCC-------chHH---HHHHHHcCChh----hhh-----hchhhccchhhHHHhCCC
Confidence 2223334789999999999999863 1221 22222222110 011 124789999999999999
Q ss_pred CCChHHHHHHHHHHHHHh
Q psy9575 767 GLNPNRSINKIKELMIYR 784 (786)
Q Consensus 767 gi~~~~~i~~lr~~~~~~ 784 (786)
++++.+++.++|+.+.+.
T Consensus 468 ga~~~~~i~~~r~~l~~~ 485 (807)
T 3cf4_A 468 EIPILNVIEKIAQKQIAE 485 (807)
T ss_dssp CCCHHHHHHHHTHHHHHT
T ss_pred CCChHHHHHHHHHHHHhc
Confidence 999999999999887654
No 35
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.65 E-value=6.3e-09 Score=117.46 Aligned_cols=141 Identities=18% Similarity=0.170 Sum_probs=73.8
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||+.|++.|.+|+||||.....+++....||.+...+ |.|........+....+..+
T Consensus 19 l~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~g---------------------ciPsk~l~~~~~~~~~~~~~ 77 (488)
T 3dgz_A 19 LACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVG---------------------CIPKKLMHQAALLGGMIRDA 77 (488)
T ss_dssp HHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHS---------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccC---------------------CcccHHHHHHHHHHHHHHHH
Confidence 479999999999999999854322222222333221110 23444434444555566677
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILG 160 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G 160 (786)
..+|+.+.... .+ ...+.....+.....+...+...+++.||+++.+. +..+ +. ..
T Consensus 78 ~~~g~~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~--~~-~~--- 133 (488)
T 3dgz_A 78 HHYGWEVAQPV--QH---------------NWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV--DE-HT--- 133 (488)
T ss_dssp HHTTCCCCSSC--CC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES--SS-SE---
T ss_pred HhcCcccCCcC--cc---------------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc--cC-Ce---
Confidence 77888764211 00 00100000001112223334445566799987665 2221 22 22
Q ss_pred EEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 161 VVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 161 ~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.+ ...+|+...+.++.||||||+..
T Consensus 134 v~v-~~~~g~~~~~~~d~lViATGs~p 159 (488)
T 3dgz_A 134 VRG-VDKGGKATLLSAEHIVIATGGRP 159 (488)
T ss_dssp EEE-ECTTSCEEEEEEEEEEECCCEEE
T ss_pred EEE-EeCCCceEEEECCEEEEcCCCCC
Confidence 222 22566666799999999999754
No 36
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.64 E-value=3.4e-08 Score=104.69 Aligned_cols=56 Identities=20% Similarity=0.310 Sum_probs=43.7
Q ss_pred ccccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 335 YQMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 335 ~t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
...|+|.||++++ |++||+||+||+++ . .+ .......|+..|++||.++++++.+.
T Consensus 264 ~~~g~i~vd~~~~---------t~~~~vya~GD~~~-~-~~----~~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (323)
T 3f8d_A 264 DTNGYIKVDEWMR---------TSVPGVFAAGDCTS-A-WL----GFRQVITAVAQGAVAATSAYRYVTEK 319 (323)
T ss_dssp CTTSSBCCCTTCB---------CSSTTEEECSTTBS-T-TT----TCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCcEecCCCce---------ecCCCEEEcceecC-C-CC----cccceeehhhHHHHHHHHHHHHHHHh
Confidence 3478899998887 99999999999983 2 11 12346677778999999999998764
No 37
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.60 E-value=7.1e-08 Score=102.66 Aligned_cols=58 Identities=16% Similarity=0.268 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++.|++++.++.|+++..++ +...-+.. .+|+ +.++.||+|||..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~---~~g~---~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 66 AQELINNLKEQMAKFDQTICLEQAVESVEKQA-DGVFKLVT---NEET---HYSKTVIITAGNGA 123 (332)
T ss_dssp HHHHHHHHHHHHTTSCCEEECSCCEEEEEECT-TSCEEEEE---SSEE---EEEEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHHhCCcEEccCEEEEEEECC-CCcEEEEE---CCCE---EEeCEEEECCCCCc
Confidence 45788888888888899999999999998875 31222222 4553 88999999999843
No 38
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.54 E-value=2.5e-06 Score=92.91 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...|.+.+++.|++++.++.++++..++ +++.++.... +++...++|+.||.|+|..+
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~--~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecc--cccceEEEEeEEEeCCcccc
Confidence 4577788899999999999999999999986 8998887653 56677899999999999766
No 39
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.53 E-value=3.2e-07 Score=96.51 Aligned_cols=51 Identities=22% Similarity=0.190 Sum_probs=39.1
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
.|.|.||+++| |++||+||+|||++.++ ..+..|+-.|++||.++.+++..
T Consensus 251 ~G~I~vd~~~~---------Ts~p~IyA~GDv~~~~~--------~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 251 NGTFVIDDFGR---------TSEKNIYLAGETTTQGP--------SSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp TSSSCSSTTCB---------CSSTTEEECSHHHHTSC--------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECcCCc---------cCCCCEEEEeccCCCcc--------hHHHHHHHHHHHHHHHHHHHHhh
Confidence 45677777777 99999999999983222 12456777799999999998854
No 40
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.53 E-value=1.4e-08 Score=115.36 Aligned_cols=141 Identities=17% Similarity=0.130 Sum_probs=75.1
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||+.|++.|++|+||||......++.+..||.+...+ |.|........+....+..+
T Consensus 45 l~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~G---------------------ciPsk~l~~~~~~~~~~~~~ 103 (519)
T 3qfa_A 45 LAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG---------------------CIPKKLMHQAALLGQALQDS 103 (519)
T ss_dssp HHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHS---------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcC---------------------ccchHHHHHHHHHHHHHHHH
Confidence 479999999999999999975433333333444332111 23444333344455566777
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILG 160 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G 160 (786)
..+|+.+.... .+ ...+.....+.....+...+...+++.||+++.+. +.. + +. ..
T Consensus 104 ~~~g~~~~~~~--~~---------------d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~-~-d~-~~--- 159 (519)
T 3qfa_A 104 RNYGWKVEETV--KH---------------DWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQF-I-GP-HR--- 159 (519)
T ss_dssp HHTTBCCCSSC--CB---------------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEE-E-ET-TE---
T ss_pred HhcCcccCCcC--cc---------------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEE-e-eC-CE---
Confidence 78888654211 00 01111000011112233334445566799998765 222 2 22 22
Q ss_pred EEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 161 VVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 161 ~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.+ ...+|+...+.++.||||||+..
T Consensus 160 v~v-~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 160 IKA-TNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp EEE-ECTTCCCCEEEEEEEEECCCEEE
T ss_pred EEE-EcCCCCEEEEECCEEEEECCCCc
Confidence 222 22456545789999999999754
No 41
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.53 E-value=3.9e-07 Score=98.34 Aligned_cols=61 Identities=15% Similarity=0.044 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...+...|.+.+++.|++|+++++|++|..++ +.++++.. .+|+...++|+.||+|||+++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~---~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGFELDF---GGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSEEEEE---CTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceEEEEE---CCCceeEEEeCEEEECCCcch
Confidence 46789999999999999999999999999886 44334443 566555799999999999876
No 42
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.52 E-value=1.9e-07 Score=101.63 Aligned_cols=169 Identities=14% Similarity=0.135 Sum_probs=98.8
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHH------HHHHHHHHh-c-----CCC----CcHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWH------WHMFDTIKG-S-----DYL----GDQD 64 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~------~~~~d~~~~-~-----~~~----~~~~ 64 (786)
+++|++|+++|.+|+||||....++.|..++|.+...... ..... ..+.++... + .+. .+++
T Consensus 18 l~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~--~~~~~l~~~~~~~~~~l~~~~~~~~~~~g~l~~~~~~~ 95 (382)
T 1y56_B 18 VTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFND--EANVRVMKRSVELWKKYSEEYGFSFKQTGYLFLLYDDE 95 (382)
T ss_dssp HHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSS--HHHHHHHHHHHHHHHHHHHHHTCCEECCCEEEEECSHH
T ss_pred HHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCC--hHHHHHHHHHHHHHHHHHHHhCCCeeccceEEEEeCHH
Confidence 4799999999999999999977767777777665543221 11100 011111111 0 000 1222
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccCCCcccccCCCCccCCCCCCCcce-EEEecC--CcHHHHHHHHHHHHhcCCceE
Q psy9575 65 AIEFMCKEAPKVVYELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIAR-ACAVAD--RTGHALLHTLYQRNLHAKTNF 141 (786)
Q Consensus 65 ~v~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r-~~~~~~--~~g~~i~~~L~~~~~~~Gv~i 141 (786)
.. .......+++.++|+++......++. ..++.... . .... .+...+ .....+...|.+.+++.|++|
T Consensus 96 ~~----~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~---~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i 166 (382)
T 1y56_B 96 EV----KTFKRNIEIQNKFGVPTKLITPEEAK-EIVPLLDI---S-EVIAASWNPTDGKADPFEATTAFAVKAKEYGAKL 166 (382)
T ss_dssp HH----HHHHHHHHHHHHTTCCCEEECHHHHH-HSSTTCCC---T-TCCEEEEETTCCEECHHHHHHHHHHHHHHTTCEE
T ss_pred HH----HHHHHHHHHHHhcCCCcEEeCHHHHH-HhCCCCCc---c-cceEEEEcCCCeeECHHHHHHHHHHHHHHCCCEE
Confidence 22 22234456677788876532211111 00110000 0 0000 111111 135678899999999999999
Q ss_pred EeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 142 FIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 142 ~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+++++|++|..++ +++.|+.+ .+| .++|+.||+|||.++
T Consensus 167 ~~~~~v~~i~~~~-~~v~gv~~---~~g---~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 167 LEYTEVKGFLIEN-NEIKGVKT---NKG---IIKTGIVVNATNAWA 205 (382)
T ss_dssp ECSCCEEEEEESS-SBEEEEEE---TTE---EEECSEEEECCGGGH
T ss_pred ECCceEEEEEEEC-CEEEEEEE---CCc---EEECCEEEECcchhH
Confidence 9999999999886 88888765 445 589999999999876
No 43
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.51 E-value=5.6e-08 Score=109.77 Aligned_cols=46 Identities=22% Similarity=0.229 Sum_probs=34.1
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|+|.||+.+| |++||+||+|||+ ++. .++.. |...|++|+++++.
T Consensus 317 ~G~i~vd~~~~---------t~~~~IyA~GD~~-~~~----~~~~~----A~~~g~~aa~~i~g 362 (491)
T 3urh_A 317 RGRVEIDRHFQ---------TSIAGVYAIGDVV-RGP----MLAHK----AEDEGVAVAEIIAG 362 (491)
T ss_dssp TSCBCCCTTCB---------CSSTTEEECGGGS-SSC----CCHHH----HHHHHHHHHHHHTT
T ss_pred CCCEeECCCCC---------CCCCCEEEEEecC-CCc----cchhH----HHHHHHHHHHHHcC
Confidence 46688888777 9999999999998 332 24444 44558999888875
No 44
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.49 E-value=5.2e-08 Score=109.80 Aligned_cols=128 Identities=16% Similarity=0.146 Sum_probs=69.7
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYEL 80 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~l 80 (786)
|+||+.|++.|.+|+||||... |+++...| +.|........+....+..+
T Consensus 39 l~aA~~la~~G~~V~liEk~~~--GG~~~~~g----------------------------cip~k~l~~~a~~~~~~~~~ 88 (484)
T 3o0h_A 39 VRAARLAGALGKRVAIAEEYRI--GGTCVIRG----------------------------CVPKKLYFYASQYAQEFSKS 88 (484)
T ss_dssp HHHHHHHHHTTCCEEEEESSCT--THHHHHHS----------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCEEEEEeCCCC--CCceeccC----------------------------ccccHHHHHHHHHHHHHHHH
Confidence 5799999999999999999544 34443333 22333333344445555566
Q ss_pred HHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEE
Q psy9575 81 EHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILG 160 (786)
Q Consensus 81 ~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G 160 (786)
..+|+++... .+ ...+.....+.....+...+...+++.||+++.+. +..+ +. ..
T Consensus 89 ~~~g~~~~~~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i--~~-~~--- 143 (484)
T 3o0h_A 89 IGFGWKYADP---IF---------------NWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESR-AVFV--DE-HT--- 143 (484)
T ss_dssp GGGTBCCCCC---EE---------------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEE--ET-TE---
T ss_pred HhCCcccCCC---cc---------------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eC-CE---
Confidence 6677654211 00 01111000111122344555666677899998773 2222 22 22
Q ss_pred EEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 161 VVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 161 ~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.+ . .+++ .+.++.+|||||+..
T Consensus 144 v~v-~-~~~~--~~~~d~lviAtG~~p 166 (484)
T 3o0h_A 144 LEL-S-VTGE--RISAEKILIATGAKI 166 (484)
T ss_dssp EEE-T-TTCC--EEEEEEEEECCCEEE
T ss_pred EEE-e-cCCe--EEEeCEEEEccCCCc
Confidence 111 1 1343 588999999999754
No 45
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.49 E-value=9.1e-08 Score=107.74 Aligned_cols=45 Identities=22% Similarity=0.212 Sum_probs=33.3
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
|.|.||+.+| |++||+||+|||++ .. .+.. .|.-.|++|+++++.
T Consensus 304 G~i~vd~~~~---------t~~~~IyA~GD~~~-~~----~l~~----~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 304 GFIEVDKQMR---------TNVPHIYAIGDIVG-QP----MLAH----KAVHEGHVAAENCAG 348 (482)
T ss_dssp SCCCCCTTSB---------CSSTTEEECGGGTC-SS----CCHH----HHHHHHHHHHHHHTT
T ss_pred CCEeeCCCcc---------cCCCCEEEEEcccC-CC----ccHH----HHHHHHHHHHHHHcC
Confidence 5588888777 99999999999982 21 1333 455569999988875
No 46
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.47 E-value=4.8e-08 Score=110.07 Aligned_cols=46 Identities=20% Similarity=0.328 Sum_probs=33.7
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
|+|.||+.++ |++||+||+|||+. + ...+... |...|++|+++++.
T Consensus 306 G~i~vd~~~~---------t~~~~IyA~GD~~~-~---~~~~~~~----A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 306 DKIPVDSQEA---------TNVANIYAVGDIIY-G---KPELTPV----AVLAGRLLARRLYG 351 (483)
T ss_dssp TBBCCCTTCB---------CSSTTEEECSTTBT-T---SCCCHHH----HHHHHHHHHHHHHS
T ss_pred CEEEECcCCc---------cCCCCEEEEEcccC-C---CCccHHH----HHHHHHHHHHHHcC
Confidence 7788888887 99999999999973 2 1223333 45558888888764
No 47
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.47 E-value=9.1e-07 Score=103.89 Aligned_cols=62 Identities=6% Similarity=0.046 Sum_probs=50.2
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccC
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRIW 190 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~ 190 (786)
....++..|.+.+++.|++|+++++|++|..++ +++ ++.+ .+|. .++|+.||+|||+++...
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t---~~G~--~i~Ad~VVlAtG~~s~~l 476 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DCW-LLNF---AGDQ--QATHSVVVLANGHQISRF 476 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEE---TTSC--EEEESEEEECCGGGGGCS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-CeE-EEEE---CCCC--EEECCEEEECCCcchhcc
Confidence 356899999999999999999999999999986 553 4433 4554 489999999999987643
No 48
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.44 E-value=9e-07 Score=101.23 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=58.0
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
....++..|.+.+++.|++|+++++|++|..++ ++|.|+.+.+..+|+...|+|+.||+|||.++
T Consensus 168 d~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 346788999999999999999999999999986 89999999876678777899999999999876
No 49
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.43 E-value=5.9e-08 Score=109.17 Aligned_cols=46 Identities=26% Similarity=0.284 Sum_probs=34.4
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|+|.||+.+| |++||+||+||++ ++. .++.. |...|++|+++++.
T Consensus 297 ~G~i~vd~~~~---------t~~~~Iya~GD~~-~~~----~~~~~----A~~~g~~aa~~i~g 342 (476)
T 3lad_A 297 RGFIYVDDYCA---------TSVPGVYAIGDVV-RGA----MLAHK----ASEEGVVVAERIAG 342 (476)
T ss_dssp TSCBCCCTTSB---------CSSTTEEECGGGS-SSC----CCHHH----HHHHHHHHHHHHHH
T ss_pred CCCEeeCCCcc---------cCCCCEEEEEccC-CCc----ccHHH----HHHHHHHHHHHhcC
Confidence 56788888777 9999999999998 332 24444 44559999998875
No 50
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.42 E-value=9.1e-07 Score=96.97 Aligned_cols=172 Identities=13% Similarity=0.089 Sum_probs=98.2
Q ss_pred ChHhhhcHh-CC-CCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHH-------HHHHHHHhcCC---C--------
Q psy9575 1 MRASLQLAQ-EG-LNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHW-------HMFDTIKGSDY---L-------- 60 (786)
Q Consensus 1 L~AA~~aa~-~G-~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~-------~~~d~~~~~~~---~-------- 60 (786)
+++|++|++ +| .+|+||||....++.|..+.|.+...... +.... .+.++...... +
T Consensus 34 l~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 110 (405)
T 2gag_B 34 LATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLW---DESAGIYEKSLKLWEQLPEDLEYDFLFSQRGVLNL 110 (405)
T ss_dssp HHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSS---HHHHHHHHHHHHHHHHHHHHTTCCCCCBCCCEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCC---HHHHHHHHHHHHHHHHHHHHhCCCcCEecccEEEE
Confidence 479999999 99 99999999987767777776665543321 11111 11111111000 0
Q ss_pred -CcHHHHHHHHHHHHHHHHHHHHcCCCccccCCCcccccCCCCccCCC--CCCCcceEEEec--CCcHHHHHHHHHHHHh
Q psy9575 61 -GDQDAIEFMCKEAPKVVYELEHFGMPFDRNKNGTIYQRPFGGHSSNF--GEKPIARACAVA--DRTGHALLHTLYQRNL 135 (786)
Q Consensus 61 -~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~--~~~~~~r~~~~~--~~~g~~i~~~L~~~~~ 135 (786)
.+++.. +.....++++.++|+++......++. ..+....... ......-.+... ......+...|.+.++
T Consensus 111 ~~~~~~~----~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 185 (405)
T 2gag_B 111 AHTLGDV----RESVRRVEANKLNGVDAEWLDPSQVK-EACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAWAFARKAN 185 (405)
T ss_dssp ECSHHHH----HHHHHHHHHHHTBTCCCEEECHHHHH-HHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHHHHHHHHH
T ss_pred EcCHHHH----HHHHHHHHHHHhcCCCceEeCHHHHH-hhCCCCcccccccccceeEEEeCCCccCCHHHHHHHHHHHHH
Confidence 012211 22234456667778766432111110 0000000000 000001111111 1235678899999999
Q ss_pred cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 136 HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.|++++++++|++|..++ ++++++.+ .+| .++|+.||+|||+++
T Consensus 186 ~~g~~i~~~~~v~~i~~~~-~~~~~v~~---~~g---~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 186 EMGVDIIQNCEVTGFIKDG-EKVTGVKT---TRG---TIHAGKVALAGAGHS 230 (405)
T ss_dssp HTTCEEECSCCEEEEEESS-SBEEEEEE---TTC---CEEEEEEEECCGGGH
T ss_pred HCCCEEEcCCeEEEEEEeC-CEEEEEEe---CCc---eEECCEEEECCchhH
Confidence 9999999999999999886 78888765 456 588999999999876
No 51
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.42 E-value=6.9e-07 Score=92.99 Aligned_cols=130 Identities=19% Similarity=0.291 Sum_probs=87.8
Q ss_pred ChHhhhcHhC-CCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQE-GLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVYE 79 (786)
Q Consensus 1 L~AA~~aa~~-G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~ 79 (786)
|+||+.|++. |.+|+|+||....++++. ..|++.... +... ...+|
T Consensus 52 l~aA~~la~~~G~~V~viEk~~~~gg~~~-~~~~~~~~~---------------------~~~~-----------~~~~~ 98 (284)
T 1rp0_A 52 LSAAYEISKNPNVQVAIIEQSVSPGGGAW-LGGQLFSAM---------------------IVRK-----------PAHLF 98 (284)
T ss_dssp HHHHHHHHTSTTSCEEEEESSSSCCTTTT-CCSTTCCCE---------------------EEET-----------TTHHH
T ss_pred HHHHHHHHHcCCCeEEEEECCCCCCCcee-cCCcchHHH---------------------HcCc-----------HHHHH
Confidence 4799999997 999999999876554433 333321110 0000 12457
Q ss_pred HHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhc-CCceEEeceEEEeeeecCCCCE
Q psy9575 80 LEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLH-AKTNFFIEWMAIDLISDSEGDI 158 (786)
Q Consensus 80 l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v 158 (786)
+.++|++|... +.+.. ......+...|.+.+.+ .||++++++.|+++..++ ++|
T Consensus 99 l~~~G~~~~~~--~~~~~----------------------~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v 153 (284)
T 1rp0_A 99 LDEIGVAYDEQ--DTYVV----------------------VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRV 153 (284)
T ss_dssp HHHHTCCCEEC--SSEEE----------------------ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEE
T ss_pred HHHcCCCcccC--CCEEE----------------------ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeE
Confidence 77889988653 11110 01234677788888876 699999999999999886 889
Q ss_pred EEEEEEEc----C--C---CcEEEEEeCeEEEcCCCCCc
Q psy9575 159 LGVVALEM----E--T---GNIMILESKITILATGGGGR 188 (786)
Q Consensus 159 ~G~~~~~~----~--~---g~~~~i~AkaVVlATGG~~~ 188 (786)
.|+.+.+. . + ++...++|+.||+|||+.+.
T Consensus 154 ~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 154 GGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred EEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 89877531 1 2 33457999999999998763
No 52
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.40 E-value=6.8e-07 Score=94.28 Aligned_cols=131 Identities=18% Similarity=0.221 Sum_probs=88.3
Q ss_pred ChHhhhcHhC--CCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQE--GLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVY 78 (786)
Q Consensus 1 L~AA~~aa~~--G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~ 78 (786)
|+||+.|+++ |++|+||||....+++. +..|... . ..... +..++
T Consensus 92 L~aA~~La~~~~G~~V~LiEk~~~~GGg~-~~~g~~~---~------------------~~~~~-----------~~~~~ 138 (344)
T 3jsk_A 92 LSAAYVLSTLRPDLRITIVEAGVAPGGGA-WLGGQLF---S------------------AMVMR-----------KPADV 138 (344)
T ss_dssp HHHHHHHHHHCTTSCEEEEESSSSCCTTT-TCCBTTC---C------------------CEEEE-----------TTTHH
T ss_pred HHHHHHHHhcCCCCEEEEEeCCCccCCcc-ccCCccc---h------------------hhhcc-----------hHHHH
Confidence 5799999997 99999999987654432 2211110 0 00011 23366
Q ss_pred HHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhc-CCceEEeceEEEeeeecCC--
Q psy9575 79 ELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLH-AKTNFFIEWMAIDLISDSE-- 155 (786)
Q Consensus 79 ~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~-~Gv~i~~~~~v~~L~~~~~-- 155 (786)
||.++|++|... |.+. +.. ....+...|.+.+++ .|++++.++.+++|+.+++
T Consensus 139 ~L~~~Gv~~~~~--G~~~-----------------~~~-----~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~ 194 (344)
T 3jsk_A 139 FLDEVGVPYEDE--GDYV-----------------VVK-----HAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHA 194 (344)
T ss_dssp HHHHHTCCCEEC--SSEE-----------------EES-----CHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--
T ss_pred HHHHcCCccccc--CCeE-----------------EEe-----cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcc
Confidence 888899998643 2211 111 124677889999888 5999999999999998752
Q ss_pred --------------C--CEEEEEEEEc---CCC------cEEEEEeCeEEEcCCCCCc
Q psy9575 156 --------------G--DILGVVALEM---ETG------NIMILESKITILATGGGGR 188 (786)
Q Consensus 156 --------------g--~v~G~~~~~~---~~g------~~~~i~AkaVVlATGG~~~ 188 (786)
| +|.|+++... .+| +...|+|+.||+|||+.+.
T Consensus 195 ~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 195 ESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp --------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred cccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 3 8999987431 122 3457999999999998884
No 53
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.38 E-value=1.2e-07 Score=106.68 Aligned_cols=47 Identities=21% Similarity=0.393 Sum_probs=33.9
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSL 401 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~ 401 (786)
.|+|.||+.++ |++||+||+||++ ++. .+.. .|...|++|+++++..
T Consensus 310 ~G~i~vd~~~~---------t~~~~IyA~GD~~-~~~----~~~~----~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 310 KGHIIVDEFQN---------TNVKGIYAVGDVC-GKA----LLTP----VAIAAGRKLAHRLFEY 356 (478)
T ss_dssp TCCBCCCTTCB---------CSSTTEEECGGGG-CSS----CCHH----HHHHHHHHHHHHHHSC
T ss_pred CCCEeeCCCcc---------cCCCCEEEEEecC-CCC----ccHh----HHHHHHHHHHHHHcCC
Confidence 56688887777 9999999999998 232 2333 3455588888887753
No 54
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.36 E-value=1.6e-07 Score=105.10 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=36.3
Q ss_pred HHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 126 LLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 126 i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+...+.+.+++.||+++.++.+. .+. +. +.+.. .+|+...+.++.||+|||+.+.
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~-~~---v~V~~-~~G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA-NT---LLVDL-NDGGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS-SE---EEEEE-TTSCCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC-Ce---EEEEe-CCCceEEEEcCEEEECCCCCCC
Confidence 44556667777899999988654 243 32 22222 4563346899999999998664
No 55
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.34 E-value=1.7e-06 Score=99.21 Aligned_cols=65 Identities=15% Similarity=0.239 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
...++..|.+.+++.|++|+++++|++|..++ ++|.|+.+.+..+|+...|+|+.||+|||.|+.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 45788889999999999999999999999986 889999887755676667999999999998873
No 56
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=2.8e-07 Score=102.93 Aligned_cols=54 Identities=17% Similarity=0.029 Sum_probs=35.3
Q ss_pred HHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 126 LLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 126 i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+...+.+.+++.||+++.++.+. .+. +. +.+.. .+|+ ..+.++.||+|||+...
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~---id~-~~---v~V~~-~~G~-~~i~~d~lViATGs~p~ 146 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF---VDA-NT---VRVVN-GDSA-QTYTFKNAIIATGSRPI 146 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE---EET-TE---EEEEE-TTEE-EEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE---ccC-Ce---EEEEe-CCCc-EEEEeCEEEEecCCCCC
Confidence 44556667777899999988654 233 32 22221 3442 46899999999998653
No 57
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=98.33 E-value=5.1e-07 Score=107.80 Aligned_cols=68 Identities=21% Similarity=0.358 Sum_probs=57.3
Q ss_pred eeEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccccc---CcceEECCCCC
Q psy9575 573 QKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNEL---KQPIIIRPLPG 645 (786)
Q Consensus 573 ~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~---~~~~~i~p~~~ 645 (786)
++|+++++++ +|||++|++. .+.+.++.+|+.|.||+|.|.|||++++||.+++.+. .++.|||+|..
T Consensus 11 ~~~~~~~~~~-~~ll~~Lr~~----~~l~g~k~gC~~g~CGaCtv~vdg~~~~sC~~~~~~~~~g~~i~Tiegl~~ 81 (907)
T 1vlb_A 11 IEQNLFVDAE-ALLSDVLRQQ----LGLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGAQITTIEGVGQ 81 (907)
T ss_dssp EEEEEEECTT-SBHHHHHHHT----TCCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECHHHHCB
T ss_pred EEEEEecCCC-ChHHHHHHHh----cCCCeecCCCCCCCcCccEEEECCeEeechHhHHHHHcCCCcEEEECCCCC
Confidence 3677888776 8999999984 3467889999999999999999999999999998764 35778999853
No 58
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.32 E-value=3.3e-06 Score=99.30 Aligned_cols=63 Identities=16% Similarity=0.080 Sum_probs=49.7
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccC
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRIW 190 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~ 190 (786)
....++..|.+.+++.|++|+++++|++|..++ +++ ++.+ .+|+ ..++|+.||+|||+++...
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t---~~G~-~~i~Ad~VVlAtG~~s~~l 472 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRID-SQW-QLTF---GQSQ-AAKHHATVILATGHRLPEW 472 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS-SSE-EEEE---C-CC-CCEEESEEEECCGGGTTCS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC-CeE-EEEe---CCCc-EEEECCEEEECCCcchhcc
Confidence 356899999999999999999999999999986 653 4443 3442 1478999999999998643
No 59
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=4.3e-07 Score=101.89 Aligned_cols=46 Identities=24% Similarity=0.210 Sum_probs=33.9
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+++| |++||+||+||+++ .. .+.. .|.-.|++|+.+++.
T Consensus 296 ~G~i~vd~~~~---------t~~~~Iya~GD~~~-~~----~~~~----~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 296 LGRILVNERFS---------TNVSGVYAIGDVIP-GP----MLAH----KAEEDGVACVEYLAG 341 (470)
T ss_dssp SSCBCCCTTCB---------CSSTTEEECSTTSS-SC----CCHH----HHHHHHHHHHHHHTT
T ss_pred CCCEeECcCCc---------cCCCCEEEEeccCC-CC----ccHH----HHHHHHHHHHHHHcC
Confidence 36688888877 99999999999982 21 1333 355569999988875
No 60
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.29 E-value=6.8e-07 Score=100.02 Aligned_cols=46 Identities=15% Similarity=0.233 Sum_probs=33.1
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.+| |++||+||+||+++ . ..++.. |.-.|++|+++++.
T Consensus 285 ~G~i~vd~~~~---------t~~~~iya~GD~~~-~----~~~~~~----A~~~g~~aa~~i~g 330 (463)
T 4dna_A 285 LGAIIVDAFSR---------TSTPGIYALGDVTD-R----VQLTPV----AIHEAMCFIETEYK 330 (463)
T ss_dssp TSCBCCCTTCB---------CSSTTEEECSGGGS-S----CCCHHH----HHHHHHHHHHHHHS
T ss_pred CCCEeECcCCC---------CCCCCEEEEEecCC-C----CCChHH----HHHHHHHHHHHHcC
Confidence 45677777766 99999999999983 2 124443 45559999988874
No 61
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.29 E-value=1.5e-06 Score=94.38 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...+...|.+.+++.|++++++++|++|..++ +++ ++.+ .+| .++|+.||+|||.++
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~---~~g---~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKT---PSG---DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEE---TTE---EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEc---CCc---eEEcCEEEECCChhH
Confidence 46789999999999999999999999998876 666 5543 444 589999999999876
No 62
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.28 E-value=1.5e-06 Score=96.55 Aligned_cols=61 Identities=20% Similarity=0.288 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHhcCCceEEece---EEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEW---MAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~---~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
...++..|.+.+++.||+|++++ +|++|..++ ++|+|+.+ .+|+ .|+|+.||+|||+++..
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t---~~G~--~i~Ad~VV~AtG~~s~~ 223 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVT---ADGK--IWRAERTFLCAGASAGQ 223 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEE---TTTE--EEECSEEEECCGGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEE---CCCC--EEECCEEEECCCCChhh
Confidence 46789999999999999999999 999999986 88888876 5664 58999999999998853
No 63
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.27 E-value=8e-07 Score=99.58 Aligned_cols=47 Identities=15% Similarity=0.086 Sum_probs=34.1
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.+| |++||+||+||+++... .+.. .|.-.|++|+++++.
T Consensus 293 ~G~i~vd~~~~---------t~~~~IyA~GD~~~~~~----~~~~----~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 293 RGFVKIGDHFE---------TSIPDVYAIGDVVDKGP----MLAH----KAEDEGVACAEILAG 339 (468)
T ss_dssp TSCBCCCTTSB---------CSSTTEEECGGGBSSSC----SCHH----HHHHHHHHHHHHHTT
T ss_pred CCCEeECCCcc---------cCCCCEEEeeccCCCCC----ccHh----HHHHHHHHHHHHHcC
Confidence 46688888887 99999999999982011 1333 455569999988875
No 64
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.25 E-value=4.3e-06 Score=89.61 Aligned_cols=59 Identities=15% Similarity=0.002 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
...+...|.+.+++.|++++.++.|+++..++ +.+.++. ..+| .+.++.||+|||.++.
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~---~~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 75 RAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVA---RDGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEE---TTSC---EEEEEEEEECCCSGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEE---eCCC---EEEeCEEEECCCCCCC
Confidence 35677888888888999999999999998875 5443232 3455 6899999999998664
No 65
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.25 E-value=7.3e-07 Score=75.96 Aligned_cols=53 Identities=32% Similarity=0.516 Sum_probs=42.5
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeC-Cc-----------------cccccccccccc
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNIN-GK-----------------NGLACITNLNEL 634 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vn-G~-----------------~~laC~t~v~~~ 634 (786)
.+++++++ +|||+||++.|+. ...+|+.|.||+|.|+|. |. .+|||.+.+.++
T Consensus 13 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~~~~~~~ 83 (95)
T 1frr_A 13 FTLDVPEG-TTILDAAEEAGYD------LPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESD 83 (95)
T ss_dssp EEEEECTT-CCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESSC
T ss_pred EEEEeCCC-CcHHHHHHHcCCC------CCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeECEECCC
Confidence 45667776 8999999998873 346789999999999997 63 367999998753
No 66
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.24 E-value=4.6e-07 Score=98.35 Aligned_cols=57 Identities=14% Similarity=0.163 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...++..|.+.++++|++|+++++|++|..++ ++ +++.+ .+| .++|+.||+|||+++
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-~~V~t---~~g---~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVD-GA-WEVRC---DAG---SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEET-TE-EEEEC---SSE---EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC-Ce-EEEEe---CCC---EEEcCEEEECCChhH
Confidence 46789999999999999999999999999886 54 44433 445 689999999999886
No 67
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.24 E-value=3.6e-06 Score=93.63 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=49.8
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeee---------------cCCCCEEEEEEEEcCCCcEEEE--EeCeEEEcCC
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLIS---------------DSEGDILGVVALEMETGNIMIL--ESKITILATG 184 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~---------------~~~g~v~G~~~~~~~~g~~~~i--~AkaVVlATG 184 (786)
....+...|.+.+++.|++|+++++|++|.. ++ ++|.++.+ .+| .+ +|+.||+|||
T Consensus 179 ~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t---~~g---~i~~~Ad~VV~AtG 251 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVL---SDG---TRVEVGEKLVVAAG 251 (448)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEE---TTS---CEEEEEEEEEECCG
T ss_pred cHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-CceEEEEe---CCC---EEeecCCEEEECCC
Confidence 3468899999999999999999999999988 54 66777664 556 46 8999999999
Q ss_pred CCCc
Q psy9575 185 GGGR 188 (786)
Q Consensus 185 G~~~ 188 (786)
+++.
T Consensus 252 ~~s~ 255 (448)
T 3axb_A 252 VWSN 255 (448)
T ss_dssp GGHH
T ss_pred cCHH
Confidence 9874
No 68
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.22 E-value=4.6e-06 Score=94.14 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=55.4
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
....++..|.+.+++.|++|+++++|++|..+ ++++|+.+.+..+|+...|+|+.||+|||.++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARRE--NGLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEE--TTEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--CCEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 35688999999999999999999999999987 368888886655676667999999999998873
No 69
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=1.4e-06 Score=97.91 Aligned_cols=46 Identities=22% Similarity=0.354 Sum_probs=33.2
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|+|.||+.++ |++||+||+||++ +.. .+ ...|.-.|++|+++++.
T Consensus 301 ~G~i~vd~~~~---------t~~~~IyA~GD~~-~~~----~~----~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 301 HDQIIADEYQN---------TNVPNIYSLGDVV-GKV----EL----TPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp TSCBCCCTTCB---------CSSTTEEECGGGT-TSS----CC----HHHHHHHHHHHHHHHHS
T ss_pred CCCEeECCCCc---------cCCCCEEEEEecC-CCc----cc----HHHHHHHHHHHHHHhcC
Confidence 46777777776 9999999999997 221 12 23455668888888764
No 70
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.21 E-value=2.9e-06 Score=90.39 Aligned_cols=58 Identities=19% Similarity=0.193 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...|.+.+++.+++++.++.|+.+..++ + +..+ ...+|+ .+.++.||+|||..+
T Consensus 64 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~---~~~v-~~~~g~--~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 64 AKDLVKGLVEQVAPFNPVYSLGERAETLEREG-D---LFKV-TTSQGN--AYTAKAVIIAAGVGA 121 (335)
T ss_dssp HHHHHHHHHHHHGGGCCEEEESCCEEEEEEET-T---EEEE-EETTSC--EEEEEEEEECCTTSE
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCEEEEEEECC-C---EEEE-EECCCC--EEEeCEEEECCCCCC
Confidence 34677788888888899999999999998775 4 2222 224553 578999999999854
No 71
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=98.20 E-value=8.2e-07 Score=76.08 Aligned_cols=53 Identities=23% Similarity=0.412 Sum_probs=41.9
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCc-----------------cccccccccccc
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGK-----------------NGLACITNLNEL 634 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~-----------------~~laC~t~v~~~ 634 (786)
.+|+++++ +|||+||++.|+. ...+|+.|.||+|.|+| +|. .+|||.+.+.+.
T Consensus 16 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaC~~~~~~d 86 (98)
T 1frd_A 16 TTIEIDEE-TTILDGAEENGIE------LPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMGKGFALLCVTYPRSN 86 (98)
T ss_dssp EEEEEETT-SCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEEGGGCEESSS
T ss_pred EEEEeCCC-CcHHHHHHHcCCC------cccCCCCCCCCCCEEEEEeCCccccccccCCHHHhhCCcEEEeECEECCC
Confidence 44566666 8999999998873 34678999999999999 674 367999998653
No 72
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=98.20 E-value=8.5e-07 Score=105.88 Aligned_cols=67 Identities=21% Similarity=0.394 Sum_probs=56.0
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccccccccccc---CcceEECCCCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNEL---KQPIIIRPLPG 645 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~---~~~~~i~p~~~ 645 (786)
+|+++++++ +|||++|++. .....++.+|+.|.||+|.|.|||++++||.+++.+. .++.|||+|..
T Consensus 12 ~~~~~~~~~-~~ll~~Lr~~----~~l~g~k~gC~~G~CGaCtv~vdg~~v~sC~~~~~~~~~g~~i~TiEgl~~ 81 (907)
T 1dgj_A 12 ARRLLVSPN-DLLVDVLRSQ----LQLTSVKVGCGKGQCGACTVILDGKVVRACIIKMSRVAENASVTTLEGIGA 81 (907)
T ss_dssp CCEEEECTT-CBHHHHHHHT----TCCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECGGGTCB
T ss_pred EEEEecCCC-CcHHHHHHHh----cCCCccCCCCCCCCcCceEEEECCeEeehhHhHHHHHcCCCcEEEECCCCC
Confidence 455677776 8999999983 2456888999999999999999999999999999764 45788999953
No 73
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.20 E-value=1.2e-06 Score=94.51 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...|.+.+++.|++++.++.|+.+..++++.+ -+.. .+|+ .+.++.||+|||+.+
T Consensus 73 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~---~~g~--~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 73 AIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTF-ETRT---NTGN--VYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCE-EEEE---TTSC--EEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceE-EEEE---CCCc--EEEeeEEEEccCCCc
Confidence 346777888888888999999999999987652332 2222 4553 588999999999865
No 74
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.18 E-value=3.1e-06 Score=88.74 Aligned_cols=130 Identities=18% Similarity=0.311 Sum_probs=86.4
Q ss_pred ChHhhhcHhC--CCCEEEEEecCCCCChhhhcccCeeeccCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHH
Q psy9575 1 MRASLQLAQE--GLNVAILSKVFPTRSHTVAAQGGISASLGNMSKDNWHWHMFDTIKGSDYLGDQDAIEFMCKEAPKVVY 78 (786)
Q Consensus 1 L~AA~~aa~~--G~~V~vvek~~~~~g~s~~a~Ggi~a~~~~~~~d~~~~~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~ 78 (786)
|+||+.|++. |.+|+|+||....++++.. .+...... ... .+...
T Consensus 78 l~aA~~la~~~~g~~V~v~e~~~~~ggg~~~-~g~~~~~~---------------------~~~-----------~~~~~ 124 (326)
T 2gjc_A 78 LSAAYVIAKNRPDLKVCIIESSVAPGGGSWL-GGQLFSAM---------------------VMR-----------KPAHL 124 (326)
T ss_dssp HHHHHHHHHHCTTSCEEEECSSSSCCTTTTC-CGGGCCCE---------------------EEE-----------TTTHH
T ss_pred HHHHHHHHhcCCCCeEEEEecCccccccccc-cCcccchh---------------------hhh-----------hHHHH
Confidence 4789999998 9999999998776554332 22111000 011 22356
Q ss_pred HHHHcCCCccccCCCcccccCCCCccCCCCCCCcceEEEecCCcHHHHHHHHHHHHhcC-CceEEeceEEEeeeecC--C
Q psy9575 79 ELEHFGMPFDRNKNGTIYQRPFGGHSSNFGEKPIARACAVADRTGHALLHTLYQRNLHA-KTNFFIEWMAIDLISDS--E 155 (786)
Q Consensus 79 ~l~~~Gv~~~~~~~g~~~~~~~gg~~~~~~~~~~~r~~~~~~~~g~~i~~~L~~~~~~~-Gv~i~~~~~v~~L~~~~--~ 155 (786)
||.++|++|... |.+... .....+...|.+++.+. ||+++.++.|++|+.++ +
T Consensus 125 ~L~~~Gv~~~~~--g~~~~~----------------------~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~ 180 (326)
T 2gjc_A 125 FLQELEIPYEDE--GDYVVV----------------------KHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE 180 (326)
T ss_dssp HHHHTTCCCEEC--SSEEEE----------------------SCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-
T ss_pred HHHhhCcccccC--CCeEEE----------------------cchHHHHHHHHHHHHHhcCcEEEecceeeeeeeccccc
Confidence 888899998753 222110 12346788899988885 99999999999999874 2
Q ss_pred -C--CEEEEEEEEc---CCC------cEEEEEe---------------CeEEEcCCCCC
Q psy9575 156 -G--DILGVVALEM---ETG------NIMILES---------------KITILATGGGG 187 (786)
Q Consensus 156 -g--~v~G~~~~~~---~~g------~~~~i~A---------------kaVVlATGG~~ 187 (786)
| +|+|+++... .+| +...|.| +.||+|||.-+
T Consensus 181 ~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 181 KGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp ----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred CCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 5 9999987421 112 3356899 99999999765
No 75
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.16 E-value=1.8e-06 Score=96.55 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=31.9
Q ss_pred cccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 340 IPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 340 i~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
|.||+.+| |++||+||+|||++ .. .++. .|.-.|++|+++++.
T Consensus 290 i~vd~~~~---------t~~~~Iya~GD~~~-~~----~~~~----~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 290 IVVDETMK---------TNIPNVFATGDANG-LA----PYYH----AAVRMSIAAANNIMA 332 (466)
T ss_dssp BCCCTTCB---------CSSTTEEECGGGTC-SC----CSHH----HHHHHHHHHHHHHHT
T ss_pred EeECCCcc---------CCCCCEEEEEecCC-CC----ccHh----HHHHHHHHHHHHHhC
Confidence 77777776 99999999999983 21 2333 355559999999875
No 76
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.14 E-value=0.00014 Score=79.79 Aligned_cols=61 Identities=20% Similarity=0.115 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...|.+.+++.|++|++++.|+++..++ +.+. +.+.. .+|+...++|+.||+|+|..+
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~-v~v~~-~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSV-TTIED-INGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEE-EEEEE-TTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEE-EEEEc-CCCCEEEEEcCEEEECCCCch
Confidence 5688899999988899999999999999875 4332 22222 678766799999999999776
No 77
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.14 E-value=6.5e-07 Score=100.63 Aligned_cols=46 Identities=11% Similarity=0.015 Sum_probs=33.5
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.+| |++||+||+||+++ .. .+. ..|.-.|++|+++++.
T Consensus 304 ~G~i~vd~~~~---------t~~~~IyA~GD~~~-~~----~~~----~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 304 RGRLVIDDQFN---------SKFPHIKVVGDVTF-GP----MLA----HKAEEEGIAAVEMLKT 349 (478)
T ss_dssp TSCBCCCTTSB---------CSSTTEEECGGGSS-SC----CCH----HHHHHHHHHHHHHHHH
T ss_pred CCCEeECcCCc---------cCCCCEEEeeccCC-Cc----ccH----HHHHHHHHHHHHHHcC
Confidence 45577777776 99999999999983 21 122 3456669999988875
No 78
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.14 E-value=8.4e-07 Score=94.49 Aligned_cols=60 Identities=18% Similarity=0.154 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...|.+.+++.|++++.++ ++++..++ +.+. +......++ ..+.++.||+|||...
T Consensus 83 ~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~-~~~~-v~~~~~~~~--~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 83 GSELMDRMREQSTKFGTEIITET-VSKVDLSS-KPFK-LWTEFNEDA--EPVTTDAIILATGASA 142 (338)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSC-EEEEECSS-SSEE-EEETTCSSS--CCEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC-CEEE-EEEEecCCC--cEEEeCEEEECcCCCc
Confidence 45778888888888999999998 88887765 5442 222110133 3578999999999854
No 79
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=98.09 E-value=1.4e-06 Score=95.79 Aligned_cols=67 Identities=22% Similarity=0.322 Sum_probs=56.2
Q ss_pred eeEEE-EcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe----CCccccccccccccc--CcceEECCCCC
Q psy9575 573 QKFLV-NLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI----NGKNGLACITNLNEL--KQPIIIRPLPG 645 (786)
Q Consensus 573 ~~~~v-~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v----nG~~~laC~t~v~~~--~~~~~i~p~~~ 645 (786)
+.|++ +++++ +|+|++|++++. ..++.+|+.|.||+|.|.| ||++++||.+++.+. .++.|||++..
T Consensus 10 ~~~~~~~~~~~-~~Ll~~Lr~~~l-----~g~k~gC~~G~CGaCtV~v~~~~~g~~v~sCl~~~~~~~g~~i~TiEgl~~ 83 (462)
T 2w3s_A 10 ETRRVRIEDPT-QSLLEWLRAEGL-----TGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAA 83 (462)
T ss_dssp EEEEEECSCTT-CBHHHHHHHTTC-----TTSCCSCSSSSSCTTEEEEEETTEEEEEETTTCBGGGGTTCEEECGGGTSC
T ss_pred EEEEEecCCCC-CcHHHHHHHcCC-----CccCCCCCCCCcCCcEEEEEecCCCeEEEchhhhHHHhCCCcEEEECCCCC
Confidence 36778 77776 899999994443 2688999999999999999 999999999999874 56788999954
No 80
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=4.2e-06 Score=94.49 Aligned_cols=28 Identities=25% Similarity=0.218 Sum_probs=22.3
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhhhc
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTVAA 30 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~~a 30 (786)
++||+.|++.|++|+|+||... |+++..
T Consensus 15 l~aA~~l~~~g~~V~liE~~~~--GG~c~~ 42 (500)
T 1onf_A 15 MAAARRAARHNAKVALVEKSRL--GGTCVN 42 (500)
T ss_dssp HHHHHHHHHTTCCEEEEESSST--THHHHH
T ss_pred HHHHHHHHHCCCcEEEEeCCCc--Cccccc
Confidence 4799999999999999999853 455443
No 81
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.06 E-value=3.3e-06 Score=95.40 Aligned_cols=45 Identities=24% Similarity=0.421 Sum_probs=32.8
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
|+|.||+.+| |++||+||+|||++ .. .+.. .|.-.|++|+++++.
T Consensus 297 G~i~Vd~~~~---------t~~~~IyA~GD~~~-~~----~l~~----~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 297 NYLTVDRVSR---------TLATGIYAAGDCTG-LL----PLAS----VAAMQGRIAMYHALG 341 (499)
T ss_dssp TBCCCCSSSB---------CSSTTEEECSGGGT-SC----SCHH----HHHHHHHHHHHHHTT
T ss_pred CCEEECCCcc---------cCCCCEEEEeccCC-Cc----ccHH----HHHHHHHHHHHHhcC
Confidence 5588888777 99999999999982 21 1333 355568888888874
No 82
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=98.06 E-value=3e-06 Score=71.85 Aligned_cols=52 Identities=29% Similarity=0.485 Sum_probs=41.8
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCc-----------------ccccccccccc
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGK-----------------NGLACITNLNE 633 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~-----------------~~laC~t~v~~ 633 (786)
++++++++ +|||+||++.|+. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 12 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~ 81 (94)
T 1awd_A 12 ETIECPED-TYILDAAEEAGLD------LPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTS 81 (94)
T ss_dssp EEEECCTT-SCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESS
T ss_pred EEEEECCC-CcHHHHHHHcCCC------CCcCCCCCcCCCCEEEEEeCCcCccccccCCHHHHhCCcEEeeECEECC
Confidence 56778777 8999999998872 34679999999999998 674 25688888764
No 83
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.05 E-value=7.9e-06 Score=98.17 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=50.9
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
....++..|.+.+++.|++|+++++|++|..++ +++.++.+ .+| .|+|+.||+|||.++.
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t---~~G---~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQT---ADG---VIPADIVVSCAGFWGA 208 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE---TTE---EEECSEEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEE---CCc---EEECCEEEECCccchH
Confidence 346789999999999999999999999999876 77777765 455 5899999999998763
No 84
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.05 E-value=1.4e-05 Score=86.92 Aligned_cols=58 Identities=7% Similarity=0.060 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
...+...|.+.+++.|++|+++++|++|..++ +.+ .+.+ .+| .++|+.||+|||.++.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~-~v~~---~~g---~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISP-DSV-KIET---ANG---SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SCE-EEEE---TTE---EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecC-CeE-EEEe---CCC---EEEeCEEEEecCccHH
Confidence 36788999999999999999999999999875 443 2322 344 5899999999998764
No 85
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.04 E-value=5.8e-07 Score=101.30 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=32.8
Q ss_pred cCcccC-CCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTN-IYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSL 401 (786)
Q Consensus 338 GGi~vd-~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~ 401 (786)
|.|.|| +..| |++||+||+||++ +.. .+ ...|...|++|+++++.+
T Consensus 292 G~i~vd~~~~~---------t~~~~IyA~GD~~-~~~----~~----~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 292 NSPLFDELTLQ---------TSVDHIFVAGDAN-NTL----TL----LHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp CCBCCCTTTCB---------CSSTTEEECGGGG-TSS----CS----HHHHHHHHHHHHHHHHHT
T ss_pred CCEeECccccc---------CCCCCEEEEEecC-CCC----cc----HHHHHHHHHHHHHHHcCC
Confidence 455566 5555 9999999999998 222 12 235666699999999875
No 86
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.03 E-value=6.5e-06 Score=92.64 Aligned_cols=46 Identities=24% Similarity=0.371 Sum_probs=33.4
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|+|.||+.+| |++||+||+||++ ++. .+. ..|.-.|++|+++++.
T Consensus 305 ~G~I~Vd~~~~---------t~~~~IyA~GD~~-~~~----~l~----~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 305 NGAIKVDAYSK---------TNVDNIYAIGDVT-DRV----MLT----PVAINEGAAFVDTVFA 350 (490)
T ss_dssp TSCBCCCTTCB---------CSSTTEEECGGGG-CSC----CCH----HHHHHHHHHHHHHHHS
T ss_pred CCCEEECCCCc---------cCCCCEEEEeccC-CCc----cCH----HHHHHHHHHHHHHhcC
Confidence 56688888777 9999999999998 321 133 3455558888888764
No 87
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.02 E-value=4.1e-05 Score=83.51 Aligned_cols=57 Identities=18% Similarity=0.206 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...++..|.+.+++.|++|+++++|++|..++ +.|. +. . .+| .|+|+.||+|||+++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v~-v~--t-~~g---~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA-DGVS-VT--T-DRG---TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEEE-EE--E-SSC---EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-CeEE-EE--E-CCC---EEEcCEEEEcCCcCh
Confidence 35788899999999999999999999999875 5432 22 2 444 589999999999875
No 88
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.00 E-value=7.7e-06 Score=92.14 Aligned_cols=46 Identities=20% Similarity=0.343 Sum_probs=33.2
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|+|.||+.+| |++||+||+||++ ++. .+ ...|.-.|++|+.+++.
T Consensus 309 ~G~i~Vd~~~~---------t~~~~IyA~GD~~-~~~----~l----~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 309 KGGVQVDEFSR---------TNVPNIYAIGDIT-DRL----ML----TPVAINEGAALVDTVFG 354 (495)
T ss_dssp TSSBCCCTTCB---------CSSTTEEECGGGG-CSC----CC----HHHHHHHHHHHHHHHHS
T ss_pred CCCEEECCCCc---------cCCCCEEEEeccC-CCc----cC----HHHHHHHHHHHHHHhcC
Confidence 46688887777 9999999999998 321 12 23455568888888763
No 89
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.00 E-value=2e-05 Score=85.15 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
...++..|.+.+++.|++|+++++|++|..++ +.+ .+.+ .+| .++|+.||+|||+++..
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~-~v~~---~~g---~~~a~~vV~a~G~~s~~ 206 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD-DGV-TIET---ADG---EYQAKKAIVCAGTWVKD 206 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSE-EEEE---SSC---EEEEEEEEECCGGGGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC-CEE-EEEE---CCC---eEEcCEEEEcCCccHHh
Confidence 45788999999999999999999999999876 543 3332 556 38999999999998753
No 90
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=98.00 E-value=4.2e-06 Score=71.40 Aligned_cols=52 Identities=29% Similarity=0.390 Sum_probs=41.0
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCc-----------------ccccccccccc
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGK-----------------NGLACITNLNE 633 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~-----------------~~laC~t~v~~ 633 (786)
++++++++ +|||+||++.|+. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 14 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~ 83 (97)
T 1a70_A 14 VEFQCPDD-VYILDAAEEEGID------LPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVS 83 (97)
T ss_dssp EEEEEETT-SCHHHHHHHTTCC------CCCSSSSSCSSTTEEEEEESCEECTTCCSSCHHHHHHTEEEGGGCEESS
T ss_pred EEEEeCCC-CcHHHHHHHcCCC------cccCCCCcCCCCCeEEEccCCcCccccccCCHHHhhCCeEEEeECEECC
Confidence 45666666 8999999998873 34789999999999998 774 25699888864
No 91
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=97.99 E-value=4.2e-06 Score=71.55 Aligned_cols=52 Identities=27% Similarity=0.463 Sum_probs=40.5
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCc-----------------ccccccccccc
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGK-----------------NGLACITNLNE 633 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~-----------------~~laC~t~v~~ 633 (786)
++|+++++ +|||+||++.|+. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 14 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~ 83 (98)
T 1iue_A 14 KKIECNED-EYILDASERQNVE------LPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDEEQIKKKYILLCTCYPKS 83 (98)
T ss_dssp EEEEEETT-SCHHHHHHHTTCC------CCCSSCSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESS
T ss_pred EEEEeCCC-CcHHHHHHHcCCC------CCCCCCCCcCCCCEEEEeeCCccccccccCCHHHHhCCeEEEeECEECC
Confidence 45566666 8999999998873 34679999999999997 674 25688888754
No 92
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.99 E-value=5.8e-06 Score=92.42 Aligned_cols=46 Identities=28% Similarity=0.281 Sum_probs=33.6
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.+| |++||+||+||++ +.. .+.. .|.-.|++|+++++.
T Consensus 288 ~G~i~vd~~~~---------t~~~~Iya~GD~~-~~~----~l~~----~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 288 RGFIRVNARME---------TSVPGVYAIGDAA-RPP----LLAH----KAMREGLIAAENAAG 333 (464)
T ss_dssp TSCBCCCTTCB---------CSSTTEEECGGGT-CSS----CCHH----HHHHHHHHHHHHHTT
T ss_pred CCCEEECCCcc---------cCCCCEEEEeccC-CCc----ccHH----HHHHHHHHHHHHhcC
Confidence 45688888777 9999999999998 321 1322 455568999888874
No 93
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=97.96 E-value=5.5e-06 Score=70.81 Aligned_cols=52 Identities=29% Similarity=0.561 Sum_probs=40.6
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCc-----------------ccccccccccc
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGK-----------------NGLACITNLNE 633 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~-----------------~~laC~t~v~~ 633 (786)
.+++++++ +|||+||++.|+. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 16 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~ 85 (98)
T 1czp_A 16 HEIEVPDD-EYILDAAEEQGYD------LPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTS 85 (98)
T ss_dssp EEEEEETT-SCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESS
T ss_pred EEEEeCCC-CCHHHHHHHcCCC------ccCCCCCCCCCCCeEEEccCCcCccccccCCHHHhhCCeEEeeeCEECC
Confidence 34566666 8999999998873 34679999999999997 674 25699988865
No 94
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.95 E-value=7.7e-06 Score=89.70 Aligned_cols=57 Identities=21% Similarity=0.208 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEE---------eeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAI---------DLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~---------~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...+...|.+.+++.|++|+++++|+ +|..++ +++ ++.+ .+| .++|+.||+|||.++
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~---~~g---~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN-THQ-IVVH---ETR---QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CB---CCE---EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC-CeE-EEEE---CCc---EEECCEEEECCCccH
Confidence 45789999999999999999999999 998775 665 5432 334 589999999999876
No 95
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.95 E-value=6.4e-06 Score=92.38 Aligned_cols=46 Identities=24% Similarity=0.244 Sum_probs=33.6
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.+| |++||+||+||+++ .. .+.. .|.-.|++|+++++.
T Consensus 299 ~G~i~vd~~~~---------t~~~~IyA~GD~~~-~~----~~~~----~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 299 RGRIPVNTRFQ---------TKIPNIYAIGDVVA-GP----MLAH----KAEDEGIICVEGMAG 344 (474)
T ss_dssp TSCCCCCTTCB---------CSSTTEEECGGGSS-SC----CCHH----HHHHHHHHHHHHHTT
T ss_pred CCCEEECcCCc---------cCCCCEEEeeecCC-CC----ccHH----HHHHHHHHHHHHhcC
Confidence 35688888777 99999999999982 21 1333 455558999888875
No 96
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.95 E-value=1.3e-05 Score=89.62 Aligned_cols=46 Identities=26% Similarity=0.453 Sum_probs=32.3
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.++ |++||+||+||++ +.. .+. ..|.-.|++|+.+++.
T Consensus 281 ~G~i~vd~~~~---------t~~~~Iya~GD~~-~~~----~~~----~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 281 NGMVPTDAYQN---------TNVPGVYALGDIT-GRD----QLT----PVAIAAGRRLAERLFD 326 (463)
T ss_dssp TSCCCCCTTSB---------CSSTTEEECGGGG-TSC----CCH----HHHHHHHHHHHHHHHS
T ss_pred CCCEeECCCCc---------cCCCCEEEEeecC-CCc----ccH----HHHHHHHHHHHHHHcC
Confidence 46688887776 9999999999998 221 122 3355558888887763
No 97
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.92 E-value=4.1e-05 Score=87.25 Aligned_cols=52 Identities=15% Similarity=0.116 Sum_probs=43.9
Q ss_pred hcCCceEEeceEEEeeeecC---CCCEEEEEEEEcCCCcEEEEEeC-eEEEcCCCCC
Q psy9575 135 LHAKTNFFIEWMAIDLISDS---EGDILGVVALEMETGNIMILESK-ITILATGGGG 187 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~---~g~v~G~~~~~~~~g~~~~i~Ak-aVVlATGG~~ 187 (786)
.+.|++|++++.|++|+.+. +++++||.+.+ .+|+.+.++|+ .||||+|+++
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES-STTCEEEEEEEEEEEECSCTTT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe-cCCcEEEEEECCEEEEeCCccC
Confidence 45699999999999999882 38999999864 46777889994 8999999986
No 98
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=97.92 E-value=5.5e-06 Score=70.85 Aligned_cols=53 Identities=26% Similarity=0.314 Sum_probs=41.2
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCc-------------------ccccccccccc
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGK-------------------NGLACITNLNE 633 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~-------------------~~laC~t~v~~ 633 (786)
.++++++++ +|||+||++.|+. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 16 ~~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~~~e~~~L~~~~~~~g~~LaCq~~~~~ 88 (98)
T 1jq4_A 16 SLRFECRSD-EDVITAALRQNIF------LMSSCREGGCATCKALCSEGDYDLKGCSVQALPPEEEEEGLVLLCRTYPKT 88 (98)
T ss_dssp EEEEEEESC-CTHHHHHHHHTCC------CCCSCCSSCCCCCCBCEEECCCCCCCSCTTTSCHHHHHHHCBCTTTCCSSC
T ss_pred cEEEEeCCC-ChHHHHHHHcCCC------CcCCCCCCCCCCCEEEEEcCccccCcccccccCHHHhcCCcEEEeeCEECC
Confidence 445666666 8999999998873 34679999999999998 674 25689888864
No 99
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.89 E-value=3.3e-05 Score=85.93 Aligned_cols=66 Identities=17% Similarity=0.159 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCccC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRIW 190 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~~ 190 (786)
..+.+.|.+.+.+.|+++++++.|+++..++ ++|+|+.+.+..+|+...++|+.||.|+|..+.+.
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFR 165 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTG
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhH
Confidence 4678899999988999999999999999886 88989887652267666799999999999988643
No 100
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.89 E-value=3e-05 Score=84.50 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...|.+.+++.|++|+.+++|+++..++ +++.|+.+.+ .++...++|+.||.|+|..+
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEE--CCeEEEEEcCEEEECCCcch
Confidence 4678899999988999999999999999886 8899988754 34456799999999999876
No 101
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=97.86 E-value=1.3e-05 Score=67.60 Aligned_cols=62 Identities=19% Similarity=0.348 Sum_probs=46.2
Q ss_pred eeEEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC-Cc------------------cccccccccc
Q psy9575 573 QKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN-GK------------------NGLACITNLN 632 (786)
Q Consensus 573 ~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn-G~------------------~~laC~t~v~ 632 (786)
+.++|+++++ +|||++|++.|+. ....+|+ .|.||+|.|+|. |. .+|||.+.+.
T Consensus 10 ~~~~~~~~~g-~tll~a~~~~gi~-----gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~~~~~g~rLaCq~~~~ 83 (93)
T 1l5p_A 10 VKKQLKFEDD-QTLFTVLTEAGLM-----SADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACAITLS 83 (93)
T ss_dssp EEEEEECCTT-EEHHHHHHTTTSS-----CCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGGCEEC
T ss_pred cEEEEEECCC-ChHHHHHHHcCCC-----cCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhcCCCCCcEEeeECEEC
Confidence 3467888877 8999999998773 1457899 899999999985 42 1468888887
Q ss_pred ccCcceEE
Q psy9575 633 ELKQPIII 640 (786)
Q Consensus 633 ~~~~~~~i 640 (786)
..++.+++
T Consensus 84 ~d~~g~~v 91 (93)
T 1l5p_A 84 GENDGAVF 91 (93)
T ss_dssp GGGTTCEE
T ss_pred CCCCceEE
Confidence 65555544
No 102
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.86 E-value=5.9e-05 Score=85.30 Aligned_cols=65 Identities=14% Similarity=0.189 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
...+...|.+.+++.||+|++++.|+++..++ ++|.|+.+.+ .+|+...++|+.||.|+|..+.+
T Consensus 110 r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 110 RARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRN-TEGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSS
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEe-CCCCEEEEEcCEEEECCCcchHH
Confidence 34688899999999999999999999999986 8899987754 56766689999999999998854
No 103
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=97.83 E-value=7.5e-06 Score=75.57 Aligned_cols=65 Identities=18% Similarity=0.244 Sum_probs=51.8
Q ss_pred EEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeC----------Ccccccccccccc--cCcceEECCC
Q psy9575 576 LVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNIN----------GKNGLACITNLNE--LKQPIIIRPL 643 (786)
Q Consensus 576 ~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vn----------G~~~laC~t~v~~--~~~~~~i~p~ 643 (786)
.+++++. +|+|++|+.. ..-.....+|..|.||+|.|.|| |+++.||.+++.. |.++.|||.+
T Consensus 16 ~~~~~p~-~~Ll~~LR~~----lgltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G~~I~TiEGL 90 (164)
T 3nvw_A 16 EKNADPE-TTLLAYLRRK----LGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGI 90 (164)
T ss_dssp ETTCCTT-CBHHHHHHHT----SCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECGGGT
T ss_pred EecCCCC-CCHHHHHHHH----cCCCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCCcceEEeccc
Confidence 3456666 8999999972 12335678999999999999999 8999999999975 4567889988
Q ss_pred CC
Q psy9575 644 PG 645 (786)
Q Consensus 644 ~~ 645 (786)
..
T Consensus 91 ~~ 92 (164)
T 3nvw_A 91 GS 92 (164)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 104
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.76 E-value=6.7e-06 Score=91.52 Aligned_cols=46 Identities=24% Similarity=0.424 Sum_probs=32.6
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.+| |++||+||+||++ +.. .+. ..|.-.|++|+++++.
T Consensus 282 ~g~i~vd~~~~---------t~~~~IyA~GD~~-~~~----~~~----~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 282 KGYIVVDKYQN---------TNIEGIYAVGDNT-GAV----ELT----PVAVAAGRRLSERLFN 327 (450)
T ss_dssp TSCBCCCTTSB---------CSSTTEEECSGGG-TSC----CCH----HHHHHHHHHHHHHHHT
T ss_pred CCCEeECCCCc---------cCCCCEEEEeccC-CCC----ccH----HHHHHHHHHHHHHHcC
Confidence 45577777776 9999999999998 322 122 3455568888888764
No 105
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=97.74 E-value=2.5e-05 Score=67.36 Aligned_cols=40 Identities=18% Similarity=0.383 Sum_probs=32.4
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeCC
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNING 621 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vnG 621 (786)
.+|+++++ +|||+||++.|+. ...+|+ .|.||+|.|+|.+
T Consensus 16 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~g~G~Cg~C~v~v~~ 56 (103)
T 2wlb_A 16 IMIEGNEG-DSILDLAHANNID------LEGACEGSVACSTCHVIVDP 56 (103)
T ss_dssp EEEEECTT-CBHHHHHHHTTCC------CCCTTTTSSCCSTTEEEECH
T ss_pred EEEEECCC-CHHHHHHHHcCCC------cCcCCCCCCCcCCCEEEECC
Confidence 55667776 8999999998873 246899 6999999999864
No 106
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.74 E-value=5.6e-05 Score=86.79 Aligned_cols=65 Identities=18% Similarity=0.360 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEc---CCCcE-------EEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEM---ETGNI-------MILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~---~~g~~-------~~i~AkaVVlATGG~~~ 188 (786)
..+.+.|.+++++.||+|++++.+++|+.+++++|+|+.+.+. .+|+. ..++||.||+|+|+.+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4788899999999999999999999999876578999876421 24532 36899999999999885
No 107
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.72 E-value=2.6e-05 Score=65.86 Aligned_cols=51 Identities=25% Similarity=0.430 Sum_probs=39.3
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCc-----------------ccccccccccc
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGK-----------------NGLACITNLNE 633 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~-----------------~~laC~t~v~~ 633 (786)
++++++++ +|||++|++.| . ...+|+.|.||+|.|+| +|. .+|+|.+.+..
T Consensus 13 ~~~~~~~g-~tlL~a~~~~g-~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~~~~~g~~LaCq~~~~~ 81 (93)
T 1wri_A 13 ITFDVEPG-ERLIDIGSEKA-D------LPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPES 81 (93)
T ss_dssp EEEEECTT-SCHHHHHHHHS-C------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESS
T ss_pred EEEEECCC-CcHHHHHHHCc-C------CCCCCCCCCCCCCEEEEecCccCccccccCCHHHHhCCcEEeeeCEECC
Confidence 55677776 89999999987 4 24679999999999998 664 15688777754
No 108
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.65 E-value=9.9e-05 Score=84.13 Aligned_cols=51 Identities=20% Similarity=0.206 Sum_probs=43.5
Q ss_pred cCCceEEeceEEEeeeecC-CCCEEEEEEEEcCCCcEEEEEe-CeEEEcCCCCC
Q psy9575 136 HAKTNFFIEWMAIDLISDS-EGDILGVVALEMETGNIMILES-KITILATGGGG 187 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~-~g~v~G~~~~~~~~g~~~~i~A-kaVVlATGG~~ 187 (786)
+.|++|++++.|++|+.+. +++++||.+.+ .+|+.+.++| |.||||+|+++
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~-~~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVT-AAGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEE-TTSCEEEEEEEEEEEECSHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe-CCCcEEEEEeeeEEEEcccccC
Confidence 4699999999999999982 28999999876 4477778999 78999999986
No 109
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.64 E-value=2.3e-05 Score=87.26 Aligned_cols=45 Identities=27% Similarity=0.306 Sum_probs=32.6
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
|.|.||+..+ |+.|++||+||++ ++. .+. ..|.-.|++|+++++.
T Consensus 282 g~i~vd~~~~---------t~~~~iya~GD~~-~~~----~~~----~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 282 GRIPVDEHLR---------TRVPHIYAIGDVV-RGP----MLA----HKASEEGIAAVEHMVR 326 (455)
T ss_dssp SCCCCCTTSB---------CSSTTEEECGGGS-SSC----CCH----HHHHHHHHHHHHHHHH
T ss_pred CcEeECCCcc---------cCCCCEEEEecCC-CCc----cCH----HHHHHhHHHHHHHHcC
Confidence 5577777776 8999999999998 222 122 2355568999888875
No 110
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.61 E-value=1.1e-05 Score=86.56 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=39.8
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
....++..|.+.+++.|++|++ ++|++|..++ + ++|+.||+|||.++..
T Consensus 140 ~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-~-----------------~~a~~VV~A~G~~s~~ 188 (351)
T 3g3e_A 140 EGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-R-----------------EGADVIVNCTGVWAGA 188 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-H-----------------TTCSEEEECCGGGGGG
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-c-----------------CCCCEEEECCCcChHh
Confidence 3568899999999999999998 8888775432 1 5699999999998753
No 111
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=97.61 E-value=7.4e-05 Score=64.75 Aligned_cols=41 Identities=12% Similarity=0.228 Sum_probs=32.8
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN 620 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn 620 (786)
..+|+++++ +|||+||.+.|+. ....+|+ .|.||+|.|+|.
T Consensus 12 ~~~~~~~~g-~tlLeaa~~~gi~-----~i~~~C~g~G~CgtC~v~v~ 53 (106)
T 1xlq_A 12 RRELDVADG-VSLMQAAVSNGIY-----DIVGDCGGSASCATCHVYVN 53 (106)
T ss_dssp EEEEECCTT-CBHHHHHHHTTCT-----TSCCTTCSSSSSCTTEEEEC
T ss_pred EEEEEECCC-CcHHHHHHHcCCC-----CCCcCCCCCcccCcCEEEEC
Confidence 356778777 8999999999883 1347796 799999999985
No 112
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=97.54 E-value=9.5e-05 Score=63.67 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=33.6
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN 620 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn 620 (786)
.++|+++++ +|||+||.+.|+.- ...+|+ .|.||+|.|+|.
T Consensus 12 ~~~~~~~~g-~tll~a~~~~gi~~-----i~~~C~G~G~CgtC~v~v~ 53 (104)
T 3lxf_A 12 RTEIQAEPG-LSLMEALRDAGIDE-----LLALCGGCCSCATCHVLVA 53 (104)
T ss_dssp EEEEECCTT-SBHHHHHHHTTCTT-----CCCTTCSSSSCSTTEEEEC
T ss_pred EEEEEECCC-ChHHHHHHHcCCCC-----CCcCCCCCCCCCCCEEEEC
Confidence 567888887 89999999988841 236899 799999999885
No 113
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.54 E-value=0.00042 Score=72.85 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=44.8
Q ss_pred HHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 129 TLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 129 ~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
.+.+.+++.||+++.++.++++..++ +++.++...+..+|+...+.++.||+|||
T Consensus 195 ~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (319)
T 3cty_A 195 AYVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVFIYVG 249 (319)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEEECCC
T ss_pred HHHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEEEeeC
Confidence 35566677899999999999998875 77888887654467666789999999997
No 114
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=97.54 E-value=7.9e-05 Score=65.39 Aligned_cols=39 Identities=13% Similarity=0.327 Sum_probs=31.8
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN 620 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn 620 (786)
.+|+++++ +|||+||.+.|+. ...+|+ .|.||+|.|+|.
T Consensus 17 ~~v~~~~g-~tlL~aa~~~Gi~------i~~~C~g~G~CgtC~v~v~ 56 (113)
T 3ah7_A 17 LTVEVKPG-TNILELAHDHHIE------MESACGGVKACTTCHCIVR 56 (113)
T ss_dssp EEEECCTT-CBHHHHHHHTTCC------CCCTTCSSSSCSTTEEEEE
T ss_pred eEEEECCC-CcHHHHHHHcCCC------CCcCCCCCCCcCCCEEEEc
Confidence 45677776 8999999999884 236798 699999999985
No 115
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=97.54 E-value=6e-05 Score=65.21 Aligned_cols=40 Identities=15% Similarity=0.358 Sum_probs=32.5
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN 620 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn 620 (786)
.+|+++++ +|||+|+.+.|+. ....+|+ .|.||+|.|+|.
T Consensus 13 ~~~~~~~g-~tlL~aa~~~gi~-----~i~~~C~g~G~CgtC~v~v~ 53 (105)
T 1b9r_A 13 YAVDAQDG-QSLMEVATQNGVP-----GIVAECGGSCVCATCRIEIE 53 (105)
T ss_dssp EEEECCTT-CCTTHHHHHHTCC-----CCCCSSTTSSCCCCCCCEEC
T ss_pred EEEEECCC-ChHHHHHHHcCCC-----CcCcCCCCCCCcCcCEEEEC
Confidence 56777777 8999999999883 1347898 699999999885
No 116
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=97.52 E-value=2.5e-05 Score=58.69 Aligned_cols=47 Identities=28% Similarity=0.564 Sum_probs=32.5
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi 768 (786)
.++|+.||.|+.+||.......+ . .. . .....|+.||.|+.+||++.
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~----------------~-------~~-~----~~~~~C~~C~~C~~~CP~~a 51 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGD----------------D-------RY-V----IDADTCIDCGACAGVCPVDA 51 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCS----------------S-------SC-E----ECTTTCCCCCHHHHTCTTCC
T ss_pred cccCcChhhHHHHCCccccCcCC----------------C-------EE-E----eccccCcChhChHHHccccc
Confidence 46899999999999975321100 0 00 0 12357999999999999873
No 117
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.51 E-value=2.8e-05 Score=86.06 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=36.2
Q ss_pred hcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 135 LHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
++.||+++.++.|+.+..+. ..+ ...+..+++...+.++.+|||||+...
T Consensus 68 ~~~~i~~~~~~~V~~id~~~-~~~---~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDER-QTV---SVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp HHHCCEEEETEEEEEEETTT-TEE---EEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred HhcCCEEEeCCeEEEEEccC-cEE---EEEeccCCceEEEEcCEEEECCCCccc
Confidence 34699999999999987664 322 233335566677899999999998653
No 118
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=97.50 E-value=8.7e-05 Score=64.87 Aligned_cols=39 Identities=18% Similarity=0.375 Sum_probs=31.5
Q ss_pred EEEEcCCCChhHHHHHHHchhccCCCcccccCC-CCCcccceEEEeC
Q psy9575 575 FLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSC-REGVCGSDAMNIN 620 (786)
Q Consensus 575 ~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~C-r~g~Cg~C~V~vn 620 (786)
.+|+++++ +|||+||++.|+. ...+| +.|.||+|.|+|.
T Consensus 17 ~~~~~~~g-~tlL~a~~~~gi~------i~~~C~~~G~Cg~C~v~v~ 56 (111)
T 1i7h_A 17 AVLEANSG-ETILDAALRNGIE------IEHACEKSCACTTCHCIVR 56 (111)
T ss_dssp EEEECCTT-CBHHHHHHHTTCC------CCCTTSSSSCCSTTEEEEE
T ss_pred eEEEeCCC-CcHHHHHHHcCCC------CcccCCCCCcCCCCEEEEc
Confidence 45677776 8999999998873 24679 4899999999985
No 119
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=97.50 E-value=8.7e-05 Score=64.54 Aligned_cols=42 Identities=17% Similarity=0.266 Sum_probs=33.6
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCC-CcccceEEEeC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCRE-GVCGSDAMNIN 620 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~-g~Cg~C~V~vn 620 (786)
.++|+++++ +|||+||.+.|+. +|.+ .+|+. |.||+|.|.|.
T Consensus 18 ~~~v~~~~g-~tLL~aa~~~gi~-i~~~---~~Cgg~G~CgtC~v~v~ 60 (108)
T 2bt6_A 18 TLTTKGKIG-DSLLDVVVQNNLD-IDGF---GACEGTLACSTCHLIFE 60 (108)
T ss_dssp EEEEEEETT-CBHHHHHHHTTCC-CTTT---TTTSSSSSBSTTEEECC
T ss_pred EEEEEECCC-ChHHHHHHHcCCC-CCcc---cCCCCCcCcCCCEEEEC
Confidence 355666676 8999999999984 3433 78986 99999999986
No 120
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.49 E-value=0.00014 Score=81.15 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=32.2
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
|.|.||+.++ |++||+||+||+++ .. . + ...|.-.|++|+.++..
T Consensus 289 G~i~vd~~~~---------t~~~~iya~GD~~~-~~-~---~----~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 289 GAIVIDQGMR---------TSNPNIYAAGDCTD-QP-Q---F----VYVAAAAGTRAAINMTG 333 (467)
T ss_dssp SCBCCCTTCB---------CSSTTEEECSTTBS-SC-C---C----HHHHHHHHHHHHHHHTT
T ss_pred CCEEECCCcc---------cCCCCEEEEeccCC-Cc-c---c----HHHHHHHHHHHHHHHcC
Confidence 4477777776 99999999999983 21 1 1 23456668888888764
No 121
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=97.49 E-value=1e-05 Score=66.25 Aligned_cols=55 Identities=24% Similarity=0.493 Sum_probs=33.7
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi 768 (786)
.++|+.||.|+.+||.......+..+. .. ..+........|+.||.|+.+||++.
T Consensus 7 ~~~C~~Cg~C~~~CP~~a~~~~~~~~~-----------------~~---~~~~~~~~~~~C~~Cg~C~~~CP~~a 61 (80)
T 1jb0_C 7 YDTCIGCTQCVRACPTDVLEMVPWDGC-----------------KA---GQIASSPRTEDCVGCKRCETACPTDF 61 (80)
T ss_dssp ETTCCCCCHHHHHCTTCCCEEEECSSS-----------------TT---SEEEECTTGGGCCCCCHHHHHCCSSS
T ss_pred CCcCcChhHHHHHCCcccccccccccc-----------------cc---cccccCCCCCcCcCcCChhhhCCCCc
Confidence 579999999999999742211000000 00 00000113467999999999999873
No 122
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=97.49 E-value=9.5e-05 Score=66.10 Aligned_cols=39 Identities=28% Similarity=0.551 Sum_probs=32.3
Q ss_pred EEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CC
Q psy9575 576 LVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NG 621 (786)
Q Consensus 576 ~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG 621 (786)
+++++++ +|||+||.+.|+. ...+|+.|.||+|.|+| +|
T Consensus 39 ~v~v~~g-~tlL~aa~~~Gi~------i~~~C~~G~CgtC~v~v~~G 78 (128)
T 1doi_A 39 SLEVNEG-EYILEAAEAQGYD------WPFSCRAGACANCAAIVLEG 78 (128)
T ss_dssp EEECCTT-SCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEES
T ss_pred EEEECCC-CcHHHHHHHcCCC------CccCCCccCCCCCEeEEecC
Confidence 5677776 8999999999883 34678999999999998 45
No 123
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=97.44 E-value=8e-05 Score=60.82 Aligned_cols=46 Identities=22% Similarity=0.528 Sum_probs=31.9
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccc------cchhhCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIM------NCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~vCP~g 767 (786)
.++|+.||.|+.+||....... +.. .. .....|+.|| .|+.+||++
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~----------------~~~--------~~----~~~~~C~~C~~~~~~~~C~~~CP~~ 56 (80)
T 1rgv_A 5 NDDCTACDACVEECPNEAITPG----------------DPI--------YV----IDPTKCSECVGAFDEPQCRLVCPAD 56 (80)
T ss_dssp CSCCCCCCTTTTTCTTCCEECC----------------SSS--------CE----ECTTTCCTTTTTCSSCHHHHHCSSC
T ss_pred CCCCcChhhHHHHcChhccCcC----------------CCe--------eE----EcchhCcCCCCcCCccHHHHhcCcc
Confidence 5799999999999997422100 000 00 1235799999 999999987
No 124
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=97.43 E-value=0.00012 Score=65.09 Aligned_cols=41 Identities=12% Similarity=0.263 Sum_probs=32.1
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN 620 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn 620 (786)
..+|+++++ +|||+||.+.|+. ....+|+ .|.||+|.|.|.
T Consensus 33 ~~~v~~~~G-~tLL~aa~~~gi~-----gi~~~C~G~G~CgtC~v~v~ 74 (126)
T 3hui_A 33 TRTVEVEEG-ATVMEAAIRNAIP-----GVEAECGGACACATCHVYVD 74 (126)
T ss_dssp EEEEEEETT-SBHHHHHHTTTCT-----TCCCTTSSSSCCSTTEEEEC
T ss_pred EEEEEECCC-CcHHHHHHHcCCC-----CCccCCCCCCCCCCCEEEEC
Confidence 355666676 8999999998883 0236898 799999999885
No 125
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=97.43 E-value=1.4e-05 Score=76.92 Aligned_cols=62 Identities=27% Similarity=0.530 Sum_probs=34.0
Q ss_pred hhhCcccCcccCCCCCcccCCCC-CCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDR-FVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~-~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi 768 (786)
.++||.||.|+.+||........ ...+. .. . ..... . ........+.|+.||.|+.+||++.
T Consensus 50 ~~~Ci~C~~C~~~CP~~ai~~~~~~~~~~------~~-~-~~~~~----~-~~~~~~~~~~C~~C~~C~~~CP~~A 112 (182)
T 3i9v_9 50 LEKCIGCSLCAAACPAYAIYVEPAENDPE------NP-V-SAGER----Y-AKVYEINMLRCIFCGLCEEACPTGA 112 (182)
T ss_dssp CBSCCCCCHHHHHCTTCCEEEEEECCCSS------SC-S-SSSSC----E-EEEEEEETTTCCCCCHHHHHCSSSC
T ss_pred CccCcccccchhhCCcccEEeeccccccc------cc-c-ccccc----c-cceeecCCCcCcChhChhhhCCccc
Confidence 57999999999999975321000 00000 00 0 00000 0 0000113468999999999999983
No 126
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=97.42 E-value=0.00013 Score=63.21 Aligned_cols=41 Identities=10% Similarity=0.219 Sum_probs=32.8
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN 620 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn 620 (786)
..+|+++++ +|||+||.+.|+. ....+|+ .|.||+|.|+|.
T Consensus 12 ~~~~~~~~g-~tlL~aa~~~gi~-----~i~~~C~g~G~CgtC~v~v~ 53 (106)
T 1uwm_A 12 RHEVEAKPG-LTVMEAARDNGVP-----GIDADCGGACACSTCHAYVD 53 (106)
T ss_dssp EEEEECCTT-SBHHHHHHTTTCT-----TCCCTTSSSSSSCTTEEEEC
T ss_pred EEEEEECCC-CcHHHHHHHcCCC-----CcccCCCCCCCcCcCEEEEC
Confidence 356778777 8999999999883 1347895 799999999885
No 127
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.41 E-value=0.00024 Score=76.31 Aligned_cols=48 Identities=15% Similarity=0.069 Sum_probs=39.4
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
....++..|.+.+++.|++|+. ++|++|..+ .+ +|+.||+|||+++..
T Consensus 140 ~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-------------~~------~a~~VV~A~G~~s~~ 187 (363)
T 1c0p_A 140 HAPKYCQYLARELQKLGATFER-RTVTSLEQA-------------FD------GADLVVNATGLGAKS 187 (363)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-------------CS------SCSEEEECCGGGGGT
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-------------Cc------CCCEEEECCCcchhh
Confidence 4578999999999999999998 888887532 01 689999999998854
No 128
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=97.41 E-value=0.00011 Score=63.97 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=31.7
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCC-CcccceEEEeC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCRE-GVCGSDAMNIN 620 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~-g~Cg~C~V~vn 620 (786)
.++|++++| +|||+|+.+.|+. + ..+|+. |.||+|.|+|.
T Consensus 17 ~~~~~~~~g-~tlL~aa~~~gi~-i-----~~~C~g~G~CgtC~v~v~ 57 (109)
T 2y5c_A 17 RIPVSGRVG-DNVLHLAQRHGVD-L-----EGACEASLACSTCHVYVS 57 (109)
T ss_dssp EEEEEEETT-CBHHHHHHHTTCC-C-----CCTTSSSSSCCTTEEEEC
T ss_pred EEEEEECCC-CcHHHHHHHcCCC-C-----CcCCCCCcCcCccEEEEC
Confidence 345666666 8999999999883 2 367987 99999999984
No 129
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.40 E-value=0.0009 Score=73.30 Aligned_cols=56 Identities=18% Similarity=0.231 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
+..+...+.+.+++.||+|+.++.+.++..++ +++.++.. .+|+ .+.|+.||+|+|
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l---~dG~--~i~aD~Vv~a~G 248 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRM---QDGS--VIPADIVIVGIG 248 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEE---SSSC--EEECSEEEECSC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEe---CCCC--EEEcCEEEECCC
Confidence 35677788888888999999999999998875 88888876 5675 588999999999
No 130
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=97.40 E-value=7.8e-05 Score=61.72 Aligned_cols=45 Identities=22% Similarity=0.561 Sum_probs=31.4
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccc------cchhhCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIM------NCVDTCPK 766 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~vCP~ 766 (786)
.++|+.||.|+.+||.......+ . . .. .....|+.|| .|+.+||+
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~----------------~---~-----~~----~~~~~C~~C~~~~~~~~C~~~CP~ 55 (85)
T 2zvs_A 5 TKKCINCDMCEPECPNEAISMGD----------------H---I-----YE----INSDKCTECVGHYETPTCQKVCPI 55 (85)
T ss_dssp CTTCCCCCTTTTTCTTCCEECCS----------------S---S-----CE----ECGGGCCTTTTTCSSCHHHHHCSS
T ss_pred CCcCcChhHHHHHCchhccCcCC----------------C---c-----eE----EeChhccCCCCcCCccHhhHhCcC
Confidence 57999999999999975221100 0 0 00 1235799999 99999999
No 131
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=97.39 E-value=2.2e-05 Score=67.73 Aligned_cols=56 Identities=29% Similarity=0.531 Sum_probs=33.7
Q ss_pred chhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 693 GLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 693 ~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
+.++|+.||.|+.+||.......+..+ ..... ..........|+.||.|+.+||++
T Consensus 41 d~~~C~~Cg~C~~~CP~~ai~~~~~~~--------------~~~~~-----~~~~~~~~~~C~~Cg~C~~~CP~~ 96 (103)
T 1xer_A 41 DFDLCIADGSCINACPVNVFQWYDTPG--------------HPASE-----KKADPVNEQACIFCMACVNVCPVA 96 (103)
T ss_dssp ETTTCCCCCHHHHHCTTCCCEEEECTT--------------CSSCS-----EEEECTTGGGCCCCCHHHHHCTTC
T ss_pred ehhhCCChhhHHHHcCccCeecccccC--------------ccccc-----cceeecCcccccChhhHHHhcccc
Confidence 368999999999999974221000000 00000 000012346799999999999987
No 132
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.38 E-value=8.4e-05 Score=61.04 Aligned_cols=46 Identities=22% Similarity=0.556 Sum_probs=31.7
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccc------cchhhCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIM------NCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~vCP~g 767 (786)
.++|+.||.|+.+||....... +. . ..+ ....|+.|| .|+.+||++
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~----------------~~-------~-~~~----~~~~C~~C~~~~~~~~C~~~CP~~ 56 (82)
T 2fgo_A 5 TDDCINCDVCEPECPNGAISQG----------------EE-------I-YVI----DPNLCTECVGHYDEPQCQQVCPVD 56 (82)
T ss_dssp CTTCCCCCTTGGGCTTCCEEEC----------------SS-------S-EEE----CTTTCCTTTTTCSSCHHHHHCTTC
T ss_pred CCCCCChhhHHHHCChhccCCC----------------CC-------e-EEE----EchhCccCCCcCCCCHhHhhCCcc
Confidence 5799999999999997422100 00 0 001 235799999 999999986
No 133
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.34 E-value=0.00086 Score=76.17 Aligned_cols=64 Identities=13% Similarity=0.018 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEE--EEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGV--VALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~--~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
...+...|.+.+++.|++|+++++++++..++++++.|+ ...+ .++ ...++|+.||.|+|+.+.
T Consensus 119 ~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~-~~~-~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 119 QDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAG-PDG-EYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEE-TTE-EEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEc-CCC-eEEEEeCEEEECCCCcch
Confidence 457888999999999999999999999998863333333 3322 222 457999999999999873
No 134
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.32 E-value=0.00085 Score=76.83 Aligned_cols=62 Identities=19% Similarity=0.159 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...+...|.+.+++.||++++++.|+++..++ +.++++.+.+ +|+...++|+.||.|+|..+
T Consensus 127 r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 127 REEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRR--GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEE--TTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEec--CCceEEEEcCEEEECCCCcc
Confidence 35788889999999999999999999999875 7788887743 56656799999999999876
No 135
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=97.32 E-value=0.0001 Score=56.17 Aligned_cols=48 Identities=27% Similarity=0.641 Sum_probs=31.5
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
.++|+.||.|+.+||.. .... . ++. ..... ....|+.||.|+.+||++
T Consensus 7 ~~~C~~C~~C~~~Cp~~-~~~~----~-----------~~~-------~~~~~---~~~~c~~C~~C~~~CP~~ 54 (60)
T 1rof_A 7 ADACIGCGVCENLCPDV-FQLG----D-----------DGK-------AKVLQ---PETDLPCAKDAADSCPTG 54 (60)
T ss_dssp TTTCCSCCSSTTTCTTT-BCCC----S-----------SSC-------CCBSC---SSCCSTTHHHHHHHCTTC
T ss_pred hhhCCCChHHHHhCcHH-HeEC----C-----------CCC-------EeecC---chhhHHHHHHHHHhCCHh
Confidence 67999999999999963 1100 0 000 00000 135799999999999987
No 136
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.28 E-value=0.0027 Score=60.40 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=43.5
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+..+...+.+.+++.||+++.+ +++++..++ +.+ .+ ...+| .+.++.||+|||..+
T Consensus 54 ~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-~~~-~v---~~~~g---~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 54 SGEELLRRLEAHARRYGAEVRPG-VVKGVRDMG-GVF-EV---ETEEG---VEKAERLLLCTHKDP 110 (180)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECS-SSE-EE---ECSSC---EEEEEEEEECCTTCC
T ss_pred CHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC-CEE-EE---EECCC---EEEECEEEECCCCCC
Confidence 34578888899999999999999 999998765 432 22 22455 589999999999543
No 137
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=97.27 E-value=9.8e-05 Score=59.79 Aligned_cols=46 Identities=20% Similarity=0.384 Sum_probs=31.8
Q ss_pred hhhCcc--cCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 694 LYECIL--CGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~--Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
.++|+. ||.|+.+||....... +. . ... ....|+.||.|+.+||.+
T Consensus 5 ~~~C~~c~C~~C~~~Cp~~ai~~~----------------~~-------~-~~~----~~~~C~~Cg~C~~~CP~~ 52 (77)
T 1bc6_A 5 TEPCIGTKDASCVEVCPVDCIHEG----------------ED-------Q-YYI----DPDVCIDCGACEAVCPVS 52 (77)
T ss_dssp CSTTTTCCCCSSTTTCTTCCEEEC----------------SS-------S-EEE----CTTTCCSCCSHHHHSGGG
T ss_pred CccCCCCCcchhHHhcccccEEeC----------------CC-------c-EEE----CcccCcCccCCHhhcCcc
Confidence 579999 9999999997421100 00 0 001 235799999999999987
No 138
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=97.25 E-value=7.9e-05 Score=81.35 Aligned_cols=50 Identities=22% Similarity=0.492 Sum_probs=34.1
Q ss_pred hchhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCC-ccccccccccchhhCCCCC
Q psy9575 692 DGLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPY-RLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 692 ~~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~C~~Cg~C~~vCP~gi 768 (786)
.+.++|+.||+|+.+||....... +. . .... ....|+.||+|+.+||++.
T Consensus 30 ~d~~kCi~Cg~C~~~CP~~ai~~~----------------~~---~--------~~~i~~~~~C~~Cg~C~~~CP~~A 80 (421)
T 1hfe_L 30 IDEAKCIGCDTCSQYCPTAAIFGE----------------MG---E--------PHSIPHIEACINCGQCLTHCPENA 80 (421)
T ss_dssp ECTTTCCCCCHHHHHCTTCCCBCC----------------TT---S--------CCBCCCGGGCCCCCTTGGGCTTCC
T ss_pred ECcccCCCccHHHHhcCcCceecc----------------cc---c--------ceeecChhhCCchhhHHHhhCcCC
Confidence 347899999999999998422110 00 0 0001 2467999999999999884
No 139
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.25 E-value=0.0022 Score=70.35 Aligned_cols=57 Identities=12% Similarity=0.218 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.|.+.+++.|++|+++++|++|..++ +++.|+.+ +|+ .+.|+.||+|+|.+.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~----~g~--~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIA----DDR--IHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE----TTE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEE----CCE--EEECCEEEECCCHHH
Confidence 5689999999999999999999999999986 88888865 253 589999999999764
No 140
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=97.23 E-value=6.3e-05 Score=61.80 Aligned_cols=47 Identities=28% Similarity=0.601 Sum_probs=32.3
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccc------cchhhCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIM------NCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~vCP~g 767 (786)
.++|+.||.|+.+||....... +. . .. .....|+.|| .|+.+||++
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~----------------~~-------~-~~----i~~~~C~~C~~~~~~~~C~~~CP~~ 56 (82)
T 3eun_A 5 TDECINCDVCEPECPNGAISQG----------------DE-------T-YV----IEPSLCTECVGHYETSQCVEVCPVD 56 (82)
T ss_dssp CTTCCCCCTTGGGCTTCCEEEC----------------SS-------S-EE----ECGGGCCTTTTTCSSCHHHHHCTTC
T ss_pred CCCCcCccchHHHCChhheEcC----------------CC-------c-eE----EchhhcCCCCCCCCccHHHHhCCcc
Confidence 5799999999999997522100 00 0 00 1235799999 999999987
Q ss_pred C
Q psy9575 768 L 768 (786)
Q Consensus 768 i 768 (786)
.
T Consensus 57 A 57 (82)
T 3eun_A 57 A 57 (82)
T ss_dssp C
T ss_pred c
Confidence 3
No 141
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=97.23 E-value=0.00019 Score=76.48 Aligned_cols=54 Identities=26% Similarity=0.412 Sum_probs=43.1
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe-CCcc---------------------cccccccc
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI-NGKN---------------------GLACITNL 631 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v-nG~~---------------------~laC~t~v 631 (786)
.++++++++ +|||||+.+.|+. ...+|+.|.||+|.|+| +|.. +|||.+.+
T Consensus 15 ~~~~~~~~g-~tll~a~~~~gi~------i~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~l~~~~~~~g~~LaCq~~~ 87 (338)
T 1krh_A 15 TRFICIAQG-ETLSDAAYRQQIN------IPMDCREGECGTCRAFCESGNYDMPEDNYIEDALTPEEAQQGYVLACQCRP 87 (338)
T ss_dssp EEEEEECTT-CCHHHHHHHTTCC------CSCSCSSSSSCTTEEEEEECCEECCGGGSCTTTCCHHHHHHTEEETTTCEE
T ss_pred cEEEEeCCC-CcHHHHHHHcCCC------cccCCCCcCCCCCEEEEecCcEecccCccccccCCHHHHhCCeEEEEeCEE
Confidence 456677776 8999999999883 24679999999999998 6731 67999998
Q ss_pred ccc
Q psy9575 632 NEL 634 (786)
Q Consensus 632 ~~~ 634 (786)
.+.
T Consensus 88 ~~~ 90 (338)
T 1krh_A 88 TSD 90 (338)
T ss_dssp SSS
T ss_pred CCC
Confidence 764
No 142
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.23 E-value=0.00025 Score=74.37 Aligned_cols=53 Identities=19% Similarity=0.128 Sum_probs=41.1
Q ss_pred cccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 336 QMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 336 t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
..|+|.||+++| |++||+||+|||++.+. ++ ...|+-.|++||++|++|++..
T Consensus 256 ~~G~I~vd~~~~---------Ts~pgIyA~GDv~~~~~----~~----~~~A~~~G~~AA~~i~~~L~~l 308 (312)
T 4gcm_A 256 DVGYIVTKDDMT---------TSVPGIFAAGDVRDKGL----RQ----IVTATGDGSIAAQSAAEYIEHL 308 (312)
T ss_dssp TTSCBCCCTTSB---------CSSTTEEECSTTBSCSC----CS----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeeCCCCc---------cCCCCEEEEeecCCCcc----hH----HHHHHHHHHHHHHHHHHHHHhh
Confidence 357799999888 99999999999983222 12 3456667999999999998653
No 143
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.23 E-value=0.0022 Score=72.43 Aligned_cols=61 Identities=18% Similarity=0.251 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+...|.+.+++.||+|++++.++++..+++++|.|+.+.- .+|+ ..+.|+.||+|+|-.
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~-~~G~-~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMT-PNGE-MRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEE-TTEE-EEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEE-CCCc-EEEEcCEEEECcCCc
Confidence 456677888888899999999999999876446665543322 4563 368999999999943
No 144
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.22 E-value=0.00049 Score=78.18 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=42.8
Q ss_pred HhcCCceEEeceEEEeeeec---C-CCCEEEEEEEEcCCC-cEEEEEe-CeEEEcCCCCC
Q psy9575 134 NLHAKTNFFIEWMAIDLISD---S-EGDILGVVALEMETG-NIMILES-KITILATGGGG 187 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~---~-~g~v~G~~~~~~~~g-~~~~i~A-kaVVlATGG~~ 187 (786)
..+.+++|++++.|++|+.+ + +++++||.+.+ .+| +.+.++| |.||||+|++.
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~-~~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE-QEGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTEEECCEEEEES-STTSCCEEEEEEEEEEECCHHHH
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE-CCCceEEEEEeeeEEEEecCCcC
Confidence 34569999999999999987 2 25899998865 335 6678899 89999999875
No 145
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=97.20 E-value=4.7e-05 Score=66.04 Aligned_cols=47 Identities=23% Similarity=0.489 Sum_probs=32.5
Q ss_pred hhhCcccC--cccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCC
Q psy9575 694 LYECILCG--CCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 694 ~~~CI~Cg--~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi 768 (786)
.++|+.|| .|+.+||....... +. .. .. ....|+.||.|+.+||.+.
T Consensus 5 ~~~C~~C~~~~C~~~CP~~ai~~~----------------~~-------~~-~i----~~~~C~~Cg~C~~~CP~~a 53 (106)
T 7fd1_A 5 TDNCIKCKYTDCVEVCPVDCFYEG----------------PN-------FL-VI----HPDECIDCALCEPECPAQA 53 (106)
T ss_dssp CGGGTTTCCCHHHHHCTTCCEEEC----------------SS-------CE-EE----CTTTCCCCCTTGGGCTTCC
T ss_pred ccccCCccCcHHHHHcCccceEcC----------------CC-------cE-EE----CcccCCChhhhHHhCCChh
Confidence 57999999 99999997522110 00 00 01 2356999999999999874
No 146
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.12 E-value=0.0011 Score=75.61 Aligned_cols=61 Identities=13% Similarity=0.086 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
-..+...|.+.+++.|++|+++++|+++..++ +.|. +.+.+ .+|+ ..++|+.||.|+|+.+
T Consensus 147 ~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-~~v~-v~~~~-~~G~-~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 147 QSRTEALLAEHAREAGAEIPRGHEVTRLRQDA-EAVE-VTVAG-PSGP-YPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHHHTEECCBSCEEEECCBCS-SCEE-EEEEE-TTEE-EEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CeEE-EEEEe-CCCc-EEEEeCEEEEcCCCCc
Confidence 35678889999988899999999999999886 5544 33322 3453 4789999999999887
No 147
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=97.09 E-value=0.00019 Score=54.44 Aligned_cols=48 Identities=21% Similarity=0.436 Sum_probs=31.2
Q ss_pred hhhCcccCcccCCCCCcccC-CCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWN-SDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~-~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
.++|+.||.|+.+||..... .. ++. .... .....|+.||.|+.+||++
T Consensus 6 ~~~C~~C~~C~~~Cp~~~~~~~~----------------~~~-------~~~~---~~~~~c~~C~~C~~~CP~~ 54 (59)
T 1dwl_A 6 HEECIGCESCVELCPEVFAMIDG----------------EEK-------AMVT---APDSTAECAQDAIDACPVE 54 (59)
T ss_dssp SCCCSSCCGGGGTSTTTEEEEEC----------------SSC-------EEES---CTTCCCGGGGTGGGGSTTC
T ss_pred hhhCcChhHHHHHCCHHheecCC----------------CCc-------EEEe---cChhhhhHHHHHHHhCCHh
Confidence 67999999999999952100 00 000 0000 1235699999999999987
No 148
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.08 E-value=0.00052 Score=77.11 Aligned_cols=65 Identities=15% Similarity=0.040 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecC-CCCEEEEEEEEcC-CCcEEEEEeCeEEEcCCCCCcc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDS-EGDILGVVALEME-TGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~-~g~v~G~~~~~~~-~g~~~~i~AkaVVlATGG~~~~ 189 (786)
..+...|.+.+++.||++++++.|+++..++ ++..+++.+.+ . +|+...++|+.||+|||+.+..
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~-~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP-NPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEES-CCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEE-CCCCCEEEEEcCEEEECCCCCccc
Confidence 5788889999988999999999999998752 24455665532 2 4532358899999999998854
No 149
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.05 E-value=0.00034 Score=80.49 Aligned_cols=51 Identities=8% Similarity=0.064 Sum_probs=37.9
Q ss_pred HHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 133 RNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 133 ~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+++.|++++.++.|+++..++ +. +.+.+..+|+...+.++.||||||+..
T Consensus 102 ~~~~~gi~v~~~~~V~~id~~~-~~---v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 102 MSKRFNLDIRVLSEVVKINKEE-KT---ITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp HHHHTTCEEECSEEEEEEETTT-TE---EEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHhcCcEEEECCEEEEEECCC-CE---EEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 3446799999999999998765 43 233333467666789999999999754
No 150
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.02 E-value=0.00093 Score=72.55 Aligned_cols=63 Identities=11% Similarity=-0.005 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
..+.+.|.+.+.+.|+++++++.++++..++++. +.+... .+|+...++|+.||.|+|..+..
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~--~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFE--RDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEE--ETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEe--cCCcEEEEEeCEEEECCCCCcHH
Confidence 4677888888888899999999999998764233 334432 36765579999999999998853
No 151
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=97.00 E-value=7.8e-05 Score=56.57 Aligned_cols=48 Identities=17% Similarity=0.511 Sum_probs=31.0
Q ss_pred hhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 695 YECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 695 ~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
++|+.||.|+.+||....... ++. ...... ....|+.||.|+.+||++
T Consensus 6 ~~C~~C~~C~~~CP~~~~~~~----------------~~~-------~~~~~~--~~~~C~~C~~C~~~CP~~ 53 (58)
T 1f2g_A 6 DDCMACEACVEICPDVFEMNE----------------EGD-------KAVVIN--PDSDLDCVEEAIDSCPAE 53 (58)
T ss_dssp TTCCCCCHHHHHCTTTEEECS----------------SSS-------SEEESC--TTCCSTHHHHHHHTCSSC
T ss_pred CcCccchHHHHhCCccEEECC----------------CCc-------EEEeCC--CccchHHHHHHHhhCChh
Confidence 799999999999997311000 000 000000 135799999999999987
No 152
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.98 E-value=0.00051 Score=71.91 Aligned_cols=41 Identities=20% Similarity=0.121 Sum_probs=31.1
Q ss_pred CcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 356 NKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 356 ~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
.|++||+||+|||+ ++.+ ++ ...|+-.|++||.+|.+|++.
T Consensus 273 ~Ts~pgIyA~GDv~-~~~~---~~----~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 273 KTSVDGVFACGDVC-DRVY---RQ----AIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp BCSSTTEEECSTTT-CSSC---CC----HHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEEecc-CCcc---hH----HHHHHHHHHHHHHHHHHHHhc
Confidence 39999999999998 3321 22 234566799999999999865
No 153
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=96.95 E-value=2e-05 Score=61.39 Aligned_cols=50 Identities=22% Similarity=0.399 Sum_probs=31.1
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
.++|+.||.|+.+||.. ..-.+..+ . ..... .....|..|+.|+.+||++
T Consensus 8 ~~~C~~Cg~C~~~CP~~-~~~~~~~~--------------~-------~~~~~--~~~~~C~~C~~C~~~CP~~ 57 (64)
T 1dax_A 8 QDECIACESCVEIAPGA-FAMDPEIE--------------K-------AYVKD--VEGASQEEVEEAMDTCPVQ 57 (64)
T ss_dssp STTCCSCCHHHHHCTTT-EEECSSSS--------------S-------EEECC--GGGSCHHHHHHHHHHSSSC
T ss_pred cccCCCchHHHHhCCcc-EeEcCCCC--------------E-------EEEec--CCCcchhHHHHHHHhCCHh
Confidence 67999999999999932 11000000 0 00000 1135699999999999987
No 154
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=96.93 E-value=0.0001 Score=59.81 Aligned_cols=46 Identities=22% Similarity=0.443 Sum_probs=31.9
Q ss_pred hhhCcc--cCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 694 LYECIL--CGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~--Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
.++|+. ||.|+.+||....... +. .. .. ....|+.||.|+.+||++
T Consensus 5 ~~~C~~c~C~~C~~~CP~~ai~~~----------------~~-------~~-~~----~~~~C~~C~~C~~~CP~~ 52 (78)
T 1h98_A 5 CEPCIGVKDQSCVEVCPVECIYDG----------------GD-------QF-YI----HPEECIDCGACVPACPVN 52 (78)
T ss_dssp CGGGTTTCCCHHHHHCTTCCEEEC----------------SS-------SE-EE----CTTTCCCCCTHHHHCTTC
T ss_pred chhCCCCCcChhhhhcCccceEcC----------------CC-------EE-EE----CcccCCcHhHHHHhCCcc
Confidence 579999 9999999997422100 00 00 01 235799999999999987
No 155
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.88 E-value=0.0027 Score=68.96 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhcC-CceEEeceEEEeeeecCCCCEEE-EEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHA-KTNFFIEWMAIDLISDSEGDILG-VVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~-Gv~i~~~~~v~~L~~~~~g~v~G-~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
...+.+.|.+.+++. |++|++++.|+++..++ +.|+| +.. .+|+ .++|+.||+|+|..+.
T Consensus 106 r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~g~v~~---~~g~--~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 106 CESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-RHAIDQVRL---NDGR--VLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-TSCEEEEEE---TTSC--EEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-CceEEEEEE---CCCC--EEECCEEEECCCCChH
Confidence 357888999999988 99999999999999876 66653 332 5675 5899999999998874
No 156
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=96.87 E-value=0.00014 Score=89.35 Aligned_cols=17 Identities=35% Similarity=0.899 Sum_probs=15.9
Q ss_pred hhhCcccCcccCCCCCc
Q psy9575 694 LYECILCGCCSTACPSF 710 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~ 710 (786)
.++||+||.|+.+||..
T Consensus 685 ~~kCi~Cg~Cv~vCP~~ 701 (1231)
T 2c42_A 685 PENCIQCNQCAFVCPHS 701 (1231)
T ss_dssp TTTCCCCCHHHHHCSSC
T ss_pred CccCCchhhHHHhCCcc
Confidence 68999999999999985
No 157
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.85 E-value=0.0056 Score=68.65 Aligned_cols=61 Identities=13% Similarity=0.143 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++.|++|+++++++++..++ +.|. +.+.+ .+| ...++|+.||.|+|+.+.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEG-DHVV-VEVEG-PDG-PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECS-SCEE-EEEEC-SSC-EEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEE-EEEEc-CCC-cEEEEeCEEEEccCcccH
Confidence 4678899999988999999999999999886 5554 44333 344 357899999999999873
No 158
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.84 E-value=0.0041 Score=67.83 Aligned_cols=62 Identities=10% Similarity=-0.022 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhc-CC-ceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLH-AK-TNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~-~G-v~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++ .| ++|+++++|+++.. + +.|. +.+.+..+|+...++|+.||.|+|..+.
T Consensus 107 ~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~-~~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 107 GELQMILLAAVRERLGQQAVRTGLGVERIEE-R-DGRV-LIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E-TTEE-EEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C-CccE-EEEecCCCCCceEEecCEEEECCCccch
Confidence 4678888888876 36 68999999999988 5 4443 3333322465557899999999998874
No 159
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=96.81 E-value=0.00024 Score=62.95 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=11.8
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN 620 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn 620 (786)
.++|++++| +|||+|+.+.|+.+. . .+.|+ .|.||.|-|.|.
T Consensus 17 ~~~v~~~~G-~tLl~aa~~~gi~i~-g---~~~CgG~g~CgtC~v~v~ 59 (123)
T 3n9z_C 17 TLTTKGKVG-DSLLDVVVENNLDID-G---FGACEGTLACSTCHLIFE 59 (123)
T ss_dssp -------------------------------CTTCSSSSCSTTBC---
T ss_pred EEEEEECCC-CcHHHHHHHcCCCCC-c---CCCCCCCCEeCCCeeEEe
Confidence 356777776 899999999988422 1 37898 699999999885
No 160
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=96.79 E-value=0.00018 Score=62.12 Aligned_cols=47 Identities=19% Similarity=0.356 Sum_probs=32.1
Q ss_pred hhhCccc--CcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCC
Q psy9575 694 LYECILC--GCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 694 ~~~CI~C--g~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi 768 (786)
.++|+.| |.|+.+||....... .. . ... ....|+.||.|+.+||++-
T Consensus 5 ~~~C~~C~c~~C~~~CP~~ai~~~-----------------~~------~-~~~----~~~~C~~Cg~C~~~CP~~A 53 (105)
T 2v2k_A 5 AEPCVDVKDKACIEECPVDCIYEG-----------------AR------M-LYI----HPDECVDCGACEPVCPVEA 53 (105)
T ss_dssp CGGGTTTCCCHHHHHCTTCCEEEC-----------------SS------C-EEE----CTTTCCCCCCSGGGCTTCC
T ss_pred cccCCCCCcChhhhhcCccccCcC-----------------CC------c-EEE----eCCcCcchhhHHHhCCccC
Confidence 5799988 999999997422100 00 0 001 2357999999999999873
No 161
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.75 E-value=0.0042 Score=69.98 Aligned_cols=61 Identities=15% Similarity=0.168 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
...+...|.+.+++.||+++++ .|+++..++++.++++.. .+|+ .++|+.||.|+|..+..
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT---KQHG--EISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE---SSSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE---CCCC--EEEcCEEEECCCcchHH
Confidence 3578889999999999999999 899998865477777765 4564 58999999999988754
No 162
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.73 E-value=0.011 Score=67.14 Aligned_cols=60 Identities=10% Similarity=0.070 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++. |+++++++++..++ +.|. +.+.+..+|+...++|+.||.|+|+.+.
T Consensus 138 ~~l~~~L~~~a~~~---v~~~~~v~~~~~~~-~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 138 HWLAPLLAEAVGER---LRTRSRLDSFEQRD-DHVR-ATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHHGGG---EECSEEEEEEEECS-SCEE-EEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHh---cccCcEEEEEEEeC-CEEE-EEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 35677888888776 88999999999886 6665 4444434476567999999999999874
No 163
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=96.73 E-value=0.00014 Score=59.49 Aligned_cols=16 Identities=44% Similarity=1.072 Sum_probs=14.8
Q ss_pred hhhCcccCcccCCCCC
Q psy9575 694 LYECILCGCCSTACPS 709 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~ 709 (786)
.++|+.||.|+.+||.
T Consensus 8 ~~~CigCg~C~~~CP~ 23 (81)
T 1iqz_A 8 KETCIACGACGAAAPD 23 (81)
T ss_dssp TTTCCCCSHHHHHCTT
T ss_pred cccCcccChhhHhCch
Confidence 6899999999999994
No 164
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.00023 Score=75.33 Aligned_cols=55 Identities=20% Similarity=0.242 Sum_probs=43.1
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
++|.+|+..+ |++|||||+||++ +.++|.+|.|- .++.++.+|++|++.|.++++
T Consensus 271 ~~iv~~~~~~---------t~vpGv~aaGDaa-~~v~g~~rmGp-~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 271 HDVVIHSGAY---------AGVDNMYFAGMEV-AELDGLNRMGP-TFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHHHCEEC---------TTSBTEEECTHHH-HHHHTCCBCCS-CCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEECCCeE---------ECCCCEEEEchHh-ccccCCCcCch-HHHHHHHHHHHHHHHHHHHhc
Confidence 3455555555 9999999999998 67888888764 244567789999999999874
No 165
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.72 E-value=0.009 Score=65.32 Aligned_cols=56 Identities=9% Similarity=0.113 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...+.+.|.+.+++.|++|+++++|++|..++ +++ + . .+|+ .+.|+.||+|+|...
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V---~-~~g~--~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEE-KKV--Y---T-RDNE--EYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTT-TEE--E---E-TTCC--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--E---E-eCCc--EEEeCEEEECCCHHH
Confidence 36789999999999999999999999999876 665 2 2 3454 589999999999653
No 166
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.71 E-value=0.00014 Score=68.40 Aligned_cols=50 Identities=22% Similarity=0.529 Sum_probs=32.7
Q ss_pred hhhCcccC-----cccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCC
Q psy9575 694 LYECILCG-----CCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 694 ~~~CI~Cg-----~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi 768 (786)
.++|+.|| .|+.+||.....-. .. . .... ......|+.||.|+.+||.+.
T Consensus 6 ~~~C~gC~~c~~~~C~~~CP~~ai~~~-----------------~~--~----~~~~--~~d~~~C~~Cg~Cv~~CP~~A 60 (166)
T 3gyx_B 6 PSKCDGCKGGEKTACMYICPNDLMILD-----------------PE--E----MKAF--NQEPEACWECYSCIKICPQGA 60 (166)
T ss_dssp TTTCCCCCSSSCCHHHHHCTTSCEEEE-----------------TT--T----TEEE--ESCGGGCCCCCHHHHHCSSCC
T ss_pred chhcCCCCCCCcchhHHhCCccccEEe-----------------cC--C----ceeE--ecCcccCcccChHhHhCCccc
Confidence 68999999 99999997421100 00 0 0000 012357999999999999873
No 167
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.70 E-value=0.0043 Score=69.60 Aligned_cols=61 Identities=15% Similarity=0.095 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++.|++|+++++++++..++ +.|. +.+.+ .+| ...++|+.||.|+|+.+.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDG-AGVT-VEVRG-PEG-KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEET-TEEE-EEEEE-TTE-EEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcC-CeEE-EEEEc-CCC-CEEEEeCEEEECCCcchH
Confidence 4678889999988999999999999999886 5544 44433 334 356899999999999873
No 168
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=96.68 E-value=0.00016 Score=66.93 Aligned_cols=49 Identities=24% Similarity=0.524 Sum_probs=32.3
Q ss_pred hhhCcccC-----cccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCC
Q psy9575 694 LYECILCG-----CCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 694 ~~~CI~Cg-----~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~g 767 (786)
.++|+.|| .|+.+||.....-. .. .. ... ......|+.||.|+.+||++
T Consensus 7 ~~~C~~C~~~~~~~C~~~CP~~ai~~~-----------------~~--~~----~~~--~id~~~C~~Cg~Cv~~CP~~ 60 (150)
T 1jnr_B 7 PEKCDGCKALERTACEYICPNDLMTLD-----------------KE--KM----KAY--NREPDMCWECYSCVKMCPQG 60 (150)
T ss_dssp TTTCCSCCSSSSCHHHHHCTTSCEEEE-----------------TT--TT----EEE--ESCGGGCCCCCHHHHHCTTC
T ss_pred cccCCCCCCcccccchhhcCccCeEEe-----------------cC--Cc----eee--eeCcccCcCHhHHHHhCCcc
Confidence 67999999 99999997421100 00 00 000 01235799999999999987
No 169
>2lfc_A Fumarate reductase, flavoprotein subunit; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Lactobacillus plantarum}
Probab=96.62 E-value=0.0042 Score=57.95 Aligned_cols=40 Identities=23% Similarity=0.343 Sum_probs=31.8
Q ss_pred CCCccc-cccccC--CcEEEcCCCCccccccCCccCCCCchhHHHHHHHH
Q psy9575 230 AGVLIT-EGVRGE--GGILINSNGERFMERYAPILKDLAPRDFVSRAMDQ 276 (786)
Q Consensus 230 ~~~~~~-~~~~~~--g~~~vn~~G~rf~~~~~p~~~~~~~~~~~~~~i~~ 276 (786)
.+.+++ +.+++. |+++||.+|+||++ |+.+++.++++|..
T Consensus 6 ~~~l~~~e~~rg~~~G~i~VN~~G~RFvn-------E~~~~~~~~~ai~~ 48 (160)
T 2lfc_A 6 VAKLTTYASKQATDMGAIYVNSKGDRIVN-------ESNVYTTFRNAILK 48 (160)
T ss_dssp CCSCCHHHHHHHHHHTCEEECSSSCEEES-------SCSCHHHHHHHHHH
T ss_pred cceeeechhhccccCCEEEECCCCcCccC-------CCCcHHHHHHHHHh
Confidence 456667 888898 99999999999999 56677777776653
No 170
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.62 E-value=0.0086 Score=66.65 Aligned_cols=54 Identities=19% Similarity=0.236 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
..+...+.+.+++.||+|+.++.+.++..++ +++. +.. .+|+ .+.++.||+|+|
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~---~~g~--~i~aD~Vv~a~G 255 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVI---TDKR--TLDADLVILAAG 255 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEE---ESSC--EEECSEEEECSC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEE---eCCC--EEEcCEEEECCC
Confidence 4566777778888999999999999998765 6665 333 3564 588999999999
No 171
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.60 E-value=0.0059 Score=69.26 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
..+...|.+.+++.||+++.+ .|+++..++++.++++.. .+|+ .++|+.||+|+|..+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~---~~g~--~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLT---KEGR--TLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE---TTSC--EECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEE---CCCc--EEEeCEEEECCCCchhh
Confidence 578889999998899999999 899998865466777665 4564 58999999999988754
No 172
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=96.56 E-value=0.00018 Score=56.03 Aligned_cols=16 Identities=31% Similarity=0.735 Sum_probs=14.8
Q ss_pred hhhCcccCcccCCCCC
Q psy9575 694 LYECILCGCCSTACPS 709 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~ 709 (786)
.++|+.||.|+.+||.
T Consensus 8 ~~~C~~C~~C~~~Cp~ 23 (66)
T 1sj1_A 8 QDTCIGDAICASLCPD 23 (66)
T ss_dssp TTTCCCCCHHHHHCTT
T ss_pred cccCcCchHHHHhCCc
Confidence 6799999999999995
No 173
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.43 E-value=0.0093 Score=67.79 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhcC-CceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 123 GHALLHTLYQRNLHA-KTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 123 g~~i~~~L~~~~~~~-Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
...+...|.+.+++. ||+++++ .|+++..++++.++++.. .+|+ .+.|+.||+|+|..+..
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~---~~G~--~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRT---ATGR--VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEE---TTSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEE---CCCC--EEECCEEEECCCCchhh
Confidence 356888999999988 9999999 999998765477777765 4564 58999999999988754
No 174
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.29 E-value=0.019 Score=64.89 Aligned_cols=60 Identities=13% Similarity=0.227 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 124 HALLHTLYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 124 ~~i~~~L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
..+...|.+.+++ .||+++++ .|+++..++++.++++.. .+|+ .++|+.||.|+|..+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~---~~g~--~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLIT---KQNG--EISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEE---SSSC--EEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEE---CCCC--EEEcCEEEECCCcchHH
Confidence 4678899999998 89999999 599998765466777655 4554 38999999999988754
No 175
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.24 E-value=0.015 Score=61.06 Aligned_cols=44 Identities=9% Similarity=-0.037 Sum_probs=32.9
Q ss_pred CceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 138 KTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 138 Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
|++|+++++|++|..++ +.+. +. ..+|+. ...|+.||+|+|..+
T Consensus 119 g~~i~~~~~v~~i~~~~-~~~~-v~---~~~g~~-~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGE-EHWN-LL---DAEGQN-HGPFSHVIIATPAPQ 162 (336)
T ss_dssp TCCEECSCCEEEEEECS-SCEE-EE---ETTSCE-EEEESEEEECSCHHH
T ss_pred cCcEEecCEEEEEEEeC-CEEE-EE---eCCCcC-ccccCEEEEcCCHHH
Confidence 89999999999999876 5432 22 256753 345899999999765
No 176
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.17 E-value=0.021 Score=61.76 Aligned_cols=55 Identities=20% Similarity=0.250 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 125 ALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 125 ~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+.+.|.+.+ .|+++++++.|+++..++ +.+. +.. .+|+ .++|+.||.|+|..+.
T Consensus 100 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~-~~v~-v~~---~~g~--~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 100 SIYGGLYELF--GPERYHTSKCLVGLSQDS-ETVQ-MRF---SDGT--KAEANWVIGADGGASV 154 (397)
T ss_dssp HHHHHHHHHH--CSTTEETTCCEEEEEECS-SCEE-EEE---TTSC--EEEESEEEECCCTTCH
T ss_pred HHHHHHHHhC--CCcEEEcCCEEEEEEecC-CEEE-EEE---CCCC--EEECCEEEECCCcchh
Confidence 4566666654 489999999999999876 5543 222 5665 5899999999998874
No 177
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.12 E-value=0.011 Score=62.46 Aligned_cols=53 Identities=8% Similarity=0.122 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+.+.|.+.+ |++|+++++|++|..++ +.+. +.. .+|+ .+.|+.||+|+...
T Consensus 112 ~~l~~~l~~~~---g~~i~~~~~V~~i~~~~-~~~~-v~~---~~g~--~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 112 SSIIKHYLKES---GAEVYFRHRVTQINLRD-DKWE-VSK---QTGS--PEQFDLIVLTMPVP 164 (342)
T ss_dssp THHHHHHHHHH---TCEEESSCCEEEEEECS-SSEE-EEE---SSSC--CEEESEEEECSCHH
T ss_pred HHHHHHHHHhc---CCEEEeCCEEEEEEEcC-CEEE-EEE---CCCC--EEEcCEEEECCCHH
Confidence 35666666554 89999999999999876 5543 322 4564 36899999999743
No 178
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=96.09 E-value=0.017 Score=62.16 Aligned_cols=55 Identities=22% Similarity=0.305 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++.||+|++++.|+++.. + + .+.. .+|+ .++|+.||.|+|..+.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~---~v~~---~~g~--~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP-V-G---RLTL---QTGE--VLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T---EEEE---TTSC--EEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C---EEEE---CCCC--EEEcCEEEECCCccHH
Confidence 57888999999989999999999999976 3 5 2333 4565 5899999999998874
No 179
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.99 E-value=0.025 Score=65.43 Aligned_cols=65 Identities=11% Similarity=0.122 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhcCCc--eEEeceEEEeeeecCC--CCEEEEEEEEc---CCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKT--NFFIEWMAIDLISDSE--GDILGVVALEM---ETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv--~i~~~~~v~~L~~~~~--g~v~G~~~~~~---~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++.|+ +|++++++++|..+++ +..+.+.+.+. .+|+...++|+.||.|+|+.+.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 4688899999999877 9999999999998752 23344554331 2566667999999999999874
No 180
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=95.96 E-value=0.0017 Score=66.23 Aligned_cols=18 Identities=11% Similarity=-0.138 Sum_probs=16.0
Q ss_pred chhhCcccCcccCCCCCc
Q psy9575 693 GLYECILCGCCSTACPSF 710 (786)
Q Consensus 693 ~~~~CI~Cg~C~~~CP~~ 710 (786)
+.++||.|+.|+.+||..
T Consensus 95 d~~~CigC~~C~~~CP~~ 112 (274)
T 1ti6_B 95 DPEKAKGKKELLDTCPYG 112 (274)
T ss_dssp CTTTTTTCGGGGGGCSSC
T ss_pred chhhccchHHHHhhCccC
Confidence 368999999999999975
No 181
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=95.96 E-value=0.0011 Score=69.73 Aligned_cols=46 Identities=22% Similarity=0.365 Sum_probs=32.8
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccc---------cchhhC
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIM---------NCVDTC 764 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg---------~C~~vC 764 (786)
.++|+.|+.|+.+||.....-. + .......|+.|+ +|+.+|
T Consensus 181 ~~kCigCg~Cv~aCP~~Ai~~~----~--------------------------~~~~~~kC~~C~~r~~~g~~paCv~~C 230 (352)
T 2ivf_B 181 QERCKGHRHCVEACPYKAIYFN----P--------------------------VSQTSEKCILCYPRIEKGIANACNRQC 230 (352)
T ss_dssp TTTCCCCCHHHHHCTTCCEEEE----T--------------------------TTTEEEECCTTHHHHTTTBCCHHHHTC
T ss_pred hhhcCCchHHHhhcCccceecc----c--------------------------ccccccccCCCcchhhcCCCChHHHhc
Confidence 5799999999999997521100 0 011246799996 999999
Q ss_pred CCCCC
Q psy9575 765 PKGLN 769 (786)
Q Consensus 765 P~gi~ 769 (786)
|++.-
T Consensus 231 P~~Ai 235 (352)
T 2ivf_B 231 PGRVR 235 (352)
T ss_dssp TTCCE
T ss_pred Cccce
Confidence 98863
No 182
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.95 E-value=0.0066 Score=63.19 Aligned_cols=51 Identities=18% Similarity=0.157 Sum_probs=39.5
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
.|.|.||+..+ |++||+||+||+++.+ ......|+..|++||.++++++.+
T Consensus 263 ~g~i~vd~~~~---------t~~~~v~a~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 263 GGQVSVDLKMQ---------TSVAGLFAAGDLRKDA--------PKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp TSCBCCCTTCB---------CSSTTEEECGGGBTTC--------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeCCCcc---------cCCCCEEEeecccCCc--------hhhhhhHHhhHHHHHHHHHHHHHh
Confidence 36677777666 9999999999998311 124667788899999999998865
No 183
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=95.89 E-value=0.0013 Score=72.25 Aligned_cols=46 Identities=20% Similarity=0.306 Sum_probs=33.3
Q ss_pred chhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccc---------cchhh
Q psy9575 693 GLYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIM---------NCVDT 763 (786)
Q Consensus 693 ~~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg---------~C~~v 763 (786)
+.++|+.||.|+.+||.....-. .. ......|+.|| .|+.+
T Consensus 213 d~~kCigCg~Cv~~CP~~AI~~~-----------------~~-------------~~~~~kC~~Cg~ri~~G~~P~Cv~~ 262 (512)
T 1q16_B 213 DQDKCRGWRMCITGCPYKKIYFN-----------------WK-------------SGKSEKCIFCYPRIEAGQPTVCSET 262 (512)
T ss_dssp CTTTCCCCCCHHHHCTTCCEEEE-----------------TT-------------TTEEEECCTTHHHHTTTCCCHHHHT
T ss_pred CHHHCCCchHHHhhCCccceecc-----------------cC-------------CCCcccCcCCCchhhcCCCCceEee
Confidence 36899999999999997421100 00 01246799999 99999
Q ss_pred CCCCC
Q psy9575 764 CPKGL 768 (786)
Q Consensus 764 CP~gi 768 (786)
||.++
T Consensus 263 CP~~A 267 (512)
T 1q16_B 263 CVGRI 267 (512)
T ss_dssp CTTCC
T ss_pred Cchhh
Confidence 99887
No 184
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.88 E-value=0.029 Score=60.92 Aligned_cols=57 Identities=12% Similarity=0.095 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
..+...|.+.+.+ ++|++++.|+++..++ +.|. +. ..+|+ .+.|+.||.|+|..+..
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~-~~v~-v~---~~~g~--~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDA-DGVT-VW---FTDGS--SASGDLLIAADGSHSAL 183 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEET-TEEE-EE---ETTSC--EEEESEEEECCCTTCSS
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecC-CcEE-EE---EcCCC--EEeeCEEEECCCcChHH
Confidence 4678888888877 8999999999999886 5332 22 25675 68999999999988753
No 185
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=95.86 E-value=0.0045 Score=65.08 Aligned_cols=38 Identities=26% Similarity=0.596 Sum_probs=30.8
Q ss_pred EEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeC-C
Q psy9575 577 VNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNIN-G 621 (786)
Q Consensus 577 v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vn-G 621 (786)
++++++ +||||||.+.|+. ...+||.|.||+|.|+|- |
T Consensus 249 ~~~~~~-~~ll~a~~~~g~~------~~~~C~~G~Cg~C~~~v~~G 287 (321)
T 2pia_A 249 FEIPAN-RSILEVLRDANVR------VPSSCESGTCGSCKTALCSG 287 (321)
T ss_dssp EEECTT-SCHHHHHHHTTCC------CCCSCSSSSSCTTEEEEEES
T ss_pred EEECCC-CcHHHHHHHcCCC------CCCCCCCCCCCCCEEEEecC
Confidence 455565 8999999999883 357899999999999873 5
No 186
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=95.62 E-value=0.1 Score=58.68 Aligned_cols=49 Identities=6% Similarity=0.015 Sum_probs=42.2
Q ss_pred cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 136 HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.+.+++.++.+..++.++ ++++|+...+ .+....+.||.||||+|++.
T Consensus 223 r~nl~v~~~~~v~~i~~~~-~~a~gv~~~~--~~~~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG-NQVRSLEVVG--RQGSAEVFADQIVLCAGALE 271 (526)
T ss_dssp CTTEEEECSCEEEEEEEET-TEEEEEEEEE--TTEEEEEEEEEEEECSHHHH
T ss_pred CCCeEEEeCCEEEEEEecC-CeEEEEEEEe--cCceEEEeecceEEcccccC
Confidence 4589999999999999997 9999998876 34566789999999999875
No 187
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=95.54 E-value=0.0011 Score=69.73 Aligned_cols=51 Identities=24% Similarity=0.440 Sum_probs=33.9
Q ss_pred chhhCcccC--cccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCCC
Q psy9575 693 GLYECILCG--CCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGLN 769 (786)
Q Consensus 693 ~~~~CI~Cg--~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~ 769 (786)
+..+|++|+ .|+.+||......... ++ .... ....|+.|+.|+.+||.++-
T Consensus 147 ~~~~C~~C~~~~Cv~~CP~gAi~~~~~--------------~g--------~v~i----d~~kCigCg~Cv~aCP~~Ai 199 (352)
T 2ivf_B 147 LARMCNHCTNPACLAACPTGAIYKRED--------------NG--------IVLV----DQERCKGHRHCVEACPYKAI 199 (352)
T ss_dssp EEECCCCCSSCHHHHHCTTCCEEECTT--------------TC--------CEEE----CTTTCCCCCHHHHHCTTCCE
T ss_pred CCCCCcCcCCccccccCCCCceeecCC--------------CC--------eEEe----chhhcCCchHHHhhcCccce
Confidence 368999999 9999999753211000 00 0001 22579999999999999864
No 188
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=95.51 E-value=0.0023 Score=66.22 Aligned_cols=17 Identities=41% Similarity=0.956 Sum_probs=15.4
Q ss_pred hhhCcccCcccCCCCCc
Q psy9575 694 LYECILCGCCSTACPSF 710 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~ 710 (786)
.++|+.||.|+.+||..
T Consensus 130 ~~~CigCg~C~~~CP~~ 146 (294)
T 1kqf_B 130 SENCIGCGYCIAGCPFN 146 (294)
T ss_dssp GGGCCCCCHHHHHCTTC
T ss_pred cccCCCcchhhhcCCCC
Confidence 68999999999999974
No 189
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.46 E-value=0.13 Score=56.96 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=48.4
Q ss_pred cHHHHHHHHHHHHhcCCce--EEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 122 TGHALLHTLYQRNLHAKTN--FFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~--i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
....+...|.+.+++.|++ +++++.|+.+..++++...-+.+.+..+|+...+.++.||+|||.++.
T Consensus 99 ~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 99 PREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCC
Confidence 3457778888888888988 999999999987652223334443433465567899999999997654
No 190
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.42 E-value=0.0019 Score=79.10 Aligned_cols=38 Identities=16% Similarity=0.054 Sum_probs=30.7
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
|++||+||+||++ ++. ....+|+..|+.|++++..++.
T Consensus 471 Ts~~~VfA~GD~~-~~~--------~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 471 TSEPWVFAGGDIV-GMA--------NTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CSSTTEEECSGGG-CSC--------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCC-CCc--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 332 1345677789999999999875
No 191
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.41 E-value=0.012 Score=61.20 Aligned_cols=57 Identities=21% Similarity=0.302 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...|.+.+++.|++++. +.++++..++ +.+ .+. ..+|+ .+.++.||+|||+.+
T Consensus 58 ~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~-~~~---~v~-~~~g~--~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 58 GLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD-SHF---VIL-AEDGK--TFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHHHHHHHHTTSCEEEC-SCEEEEEEET-TEE---EEE-ETTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC-CEE---EEE-EcCCC--EEECCEEEECCCCCC
Confidence 346777788888888999987 7888887765 422 221 14554 588999999999755
No 192
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.37 E-value=0.022 Score=63.78 Aligned_cols=58 Identities=10% Similarity=0.017 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.++|.+.++++|++|+++++|++|+.++ ++++||.+ .+|+ .+.|++||.+++-..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~---~~g~--~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHL---EDGR--RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE---TTSC--EEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEe---cCCc--EEEcCEEEECCCHHH
Confidence 5789999999999999999999999999997 99999887 6675 588999999988654
No 193
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=95.34 E-value=0.015 Score=60.41 Aligned_cols=59 Identities=20% Similarity=0.215 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCC-CCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSE-GDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~-g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.|++++.+++++.+..+.+ +...-+. ..+|+ .+.++.||+|||...
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~---~~~g~--~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIE---TASGA--VLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEE---ETTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEE---ECCCC--EEEeCEEEECcCCCc
Confidence 45677777778888999999999999865421 2222222 24564 578999999999864
No 194
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.32 E-value=0.0084 Score=67.10 Aligned_cols=66 Identities=14% Similarity=-0.026 Sum_probs=45.0
Q ss_pred ceeEEEEcCCCChhHHHHHHHchhcc---CCCcccccCCCCCcccceEEEeCCcc-cccccccccccCcceEEC
Q psy9575 572 MQKFLVNLSSNDKMLLDALHRIKYDI---DDSLTLRRSCREGVCGSDAMNINGKN-GLACITNLNELKQPIIIR 641 (786)
Q Consensus 572 ~~~~~v~~~~~~~tiL~al~~~~~~~---~~~l~~~~~Cr~g~Cg~C~V~vnG~~-~laC~t~v~~~~~~~~i~ 641 (786)
++.-+|++++| +||++||...|+.+ .+.+.+++.+ .||.|.|+|||.+ ..+|.|++.+||...+.+
T Consensus 20 ~dg~~~~~~~g-~ti~~a~~~~g~~~~~~~~~~~p~g~~---~~~~c~v~v~g~~~~~ac~~~v~~Gm~v~t~~ 89 (493)
T 1y56_A 20 FEGKELEAYEG-EKLPVALLANEIYWLTTSNEGRKRGAF---TFGPVPMTVNGVKGLEARRIKVKDGMKIERQG 89 (493)
T ss_dssp ETTEEEEEETT-CBHHHHHHHTTCCCCEECTTSCEECSS---SSSCCEEBSSSCTTEEGGGCBCCTTCEEBCCC
T ss_pred ECCEEEEecCC-CHHHHHHHHCCCceecCCCCCCCCccc---cceEEEEEECCEecccceeEEcccCcEEeccc
Confidence 33444666666 89999999998842 2233333221 1678999999976 469999999987554443
No 195
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.30 E-value=0.0089 Score=67.45 Aligned_cols=51 Identities=29% Similarity=0.517 Sum_probs=39.8
Q ss_pred EEEcCCCChhHHHHHHHchhccCCCcccccCCC-CCcccceEEEeC-Cc-----------------ccccccccccc
Q psy9575 576 LVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCR-EGVCGSDAMNIN-GK-----------------NGLACITNLNE 633 (786)
Q Consensus 576 ~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr-~g~Cg~C~V~vn-G~-----------------~~laC~t~v~~ 633 (786)
+++++++ +|||||+++.|+. ...+|+ .|.||+|.|+|. |. .+|+|.+.+..
T Consensus 14 ~v~v~~G-~tLLeAa~~aGi~------ip~~C~G~G~CGtC~v~V~~G~v~~~e~~~Ls~~e~~~G~rLaCqa~~~s 83 (631)
T 3zyy_X 14 EVAISEN-TNLMEALNLAGIN------IKTVCGGAGTCGKCLVRVVDGQKRVESYGKLKQEEIAQGYVLACQTYPES 83 (631)
T ss_dssp EEEECTT-SCHHHHHHHHTCC------CCCSCCCSSCCSTTEEEEEESCEEESCCTTCCHHHHHTTEEETTTEEECS
T ss_pred EEEECCC-CcHHHHHHHcCCC------CCcCCCCCCcCCCCEEEEeeCcccccccccCCHHHhcCCcEEeeeCEECC
Confidence 4555666 8999999999883 347899 899999999873 32 36799998864
No 196
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.20 E-value=0.013 Score=60.32 Aligned_cols=48 Identities=25% Similarity=0.195 Sum_probs=38.4
Q ss_pred CcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 339 GIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 339 Gi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
.|.+|++.+ |++||+||+||+++ .. .....|+..|++||.++++++..
T Consensus 246 ~i~vd~~~~---------t~~~~vya~GD~~~-~~--------~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 246 TIVTDPMKQ---------TTARGIFACGDVAR-PA--------GSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp EECCCTTCB---------CSSTTEEECSGGGC-TT--------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEeCCCCc---------cCCCCEEEEeecCC-ch--------HHHHHHHHhHHHHHHHHHHHHhh
Confidence 688888877 99999999999983 21 23556777799999999998855
No 197
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.17 E-value=0.13 Score=57.91 Aligned_cols=62 Identities=15% Similarity=0.107 Sum_probs=46.8
Q ss_pred cHHHHHHHHHHHHhcCCc--eEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 122 TGHALLHTLYQRNLHAKT--NFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv--~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+..+...|.+.+++.|+ .+.+++.|+++..++++...-+.+ .+|+ .+.|+.||+|||.++.
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~---~~G~--~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT---DHGE--VYRAKYVVNAVGLLSA 148 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE---TTSC--EEEEEEEEECCCSCCS
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE---cCCC--EEEeCEEEECCccccc
Confidence 345778888888888888 899999999998875334433433 5675 5799999999998653
No 198
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.10 E-value=0.063 Score=59.32 Aligned_cols=64 Identities=9% Similarity=0.108 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecC-CCCEEEE--EEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDS-EGDILGV--VALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~-~g~v~G~--~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...+...|...+++.++++.++++|+++..++ ++++.++ ...+ .+|+...+.++.||+|||+..
T Consensus 126 ~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~-g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 126 RMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN-ADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp HHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE-TTSCEEEEEESEEEECCCCEE
T ss_pred HHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec-CCCceEEEEeCEEEECCCCCC
Confidence 34566677777777899999999999998752 1344332 2223 235555789999999999844
No 199
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=95.02 E-value=0.0035 Score=60.61 Aligned_cols=17 Identities=29% Similarity=0.839 Sum_probs=14.7
Q ss_pred hhhCcccC--cccCCCCCc
Q psy9575 694 LYECILCG--CCSTACPSF 710 (786)
Q Consensus 694 ~~~CI~Cg--~C~~~CP~~ 710 (786)
..+|+.|+ .|+.+||+.
T Consensus 55 ~~~C~~C~~p~C~~~CP~g 73 (195)
T 2vpz_B 55 PEQCLHCENPPCVPVCPTG 73 (195)
T ss_dssp EEECCCCSSCTTTTTCSSS
T ss_pred cccCcCccCcHHHHhcCCC
Confidence 57899999 799999975
No 200
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.01 E-value=0.022 Score=63.82 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=45.7
Q ss_pred HHHHHHhcC-CceEEeceEEEeeeecCC-CCEEEEEEEEcCCC---cEEEEEeCeEEEcCCCCC
Q psy9575 129 TLYQRNLHA-KTNFFIEWMAIDLISDSE-GDILGVVALEMETG---NIMILESKITILATGGGG 187 (786)
Q Consensus 129 ~L~~~~~~~-Gv~i~~~~~v~~L~~~~~-g~v~G~~~~~~~~g---~~~~i~AkaVVlATGG~~ 187 (786)
+++..+++. +++|+.++.|++|+.+++ ++++||...+ .+| +...++|+.||||+|+++
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD-TDGKLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCccceeEEEeeCEEEEccCCCC
Confidence 344455556 599999999999999853 4899998865 356 456799999999999985
No 201
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=94.87 E-value=0.051 Score=53.92 Aligned_cols=58 Identities=17% Similarity=0.103 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcC-CceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHA-KTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~-Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+...|.+.+++. |++++ ++.|+++..++ +++.++.. .+|+ .++|+.||+|||.++.
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~---~~g~--~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRT---WEGP--PARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEE---TTSC--CEECSEEEECCTTCSS
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEE---CCCC--EEECCEEEECCCCChh
Confidence 35677888888887 99998 57999999876 77777765 5564 5899999999998764
No 202
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.77 E-value=0.024 Score=59.33 Aligned_cols=52 Identities=15% Similarity=-0.004 Sum_probs=40.0
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
.|+|.||++++ |++||+||+||+++ .. .+ ....|...|++||.+++.++.+.
T Consensus 263 ~g~i~vd~~~~---------t~~~~vya~GD~~~-~~---~~----~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 263 DGYVDVRDEIY---------TNIPMLFAAGDVSD-YI---YR----QLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp TSCBCCBTTTB---------CSSTTEEECSTTTC-SS---CC----CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccEecCCCCc---------cCCCCEEEeecccC-cc---HH----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 57788888777 99999999999983 21 11 24456667999999999998765
No 203
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=94.73 E-value=0.028 Score=64.27 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=45.4
Q ss_pred HhcCCceEEeceEEEeeeecCC---CCEEEEEEEEcCCCcEEEEEe-CeEEEcCCCCCc
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSE---GDILGVVALEMETGNIMILES-KITILATGGGGR 188 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~---g~v~G~~~~~~~~g~~~~i~A-kaVVlATGG~~~ 188 (786)
+++.|++|+.++.|++|+.+++ ++++||...+ .+|+...|+| |.||||+|+++.
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCTTTH
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe-CCCcEEEEEecccEEEccCCCCC
Confidence 3456999999999999998742 4899999876 5787788999 999999999863
No 204
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.70 E-value=0.086 Score=56.93 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCcc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGRI 189 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~~ 189 (786)
..+.+.|.+.+. +++|+++++|+++..++ +.+. +.. .+|+ .++|+.||.|+|..+..
T Consensus 128 ~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v~-v~~---~~g~--~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 128 NDLRAILLNSLE--NDTVIWDRKLVMLEPGK-KKWT-LTF---ENKP--SETADLVILANGGMSKV 184 (398)
T ss_dssp HHHHHHHHHTSC--TTSEEESCCEEEEEECS-SSEE-EEE---TTSC--CEEESEEEECSCTTCSC
T ss_pred HHHHHHHHhhcC--CCEEEECCEEEEEEECC-CEEE-EEE---CCCc--EEecCEEEECCCcchhH
Confidence 356667776654 37899999999998876 5442 222 4664 58899999999998853
No 205
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=94.65 E-value=0.0055 Score=59.17 Aligned_cols=18 Identities=44% Similarity=1.021 Sum_probs=16.0
Q ss_pred chhhCcccCcccCCCCCc
Q psy9575 693 GLYECILCGCCSTACPSF 710 (786)
Q Consensus 693 ~~~~CI~Cg~C~~~CP~~ 710 (786)
+.++|+.||.|+.+||..
T Consensus 86 d~~~CigC~~C~~~CP~~ 103 (195)
T 2vpz_B 86 DPKKCIACGACIAACPYD 103 (195)
T ss_dssp CTTTCCCCCHHHHHCTTC
T ss_pred cCCCCCCcChhHhhCCCC
Confidence 368999999999999974
No 206
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.63 E-value=0.031 Score=61.68 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=38.7
Q ss_pred cCcccCCC-CcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy9575 338 GGIPTNIY-GQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKKI 406 (786)
Q Consensus 338 GGi~vd~~-~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~~ 406 (786)
|.|.||+. ++ |++||+||+||++. +. ....+|+-.|+.|+.++..++.+..
T Consensus 396 G~i~vd~~~~~---------Ts~~~VfA~GD~~~-g~--------~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 396 GTLLVDHRTKM---------TNMDGVFAAGDIVR-GA--------SLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp SSBCCCTTTCB---------CSSTTEEECGGGGS-SC--------CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCc---------CCCCCEEEeccccC-Cc--------hHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 55666654 44 99999999999983 32 2356778889999999999987653
No 207
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.60 E-value=0.025 Score=64.13 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=47.1
Q ss_pred HHHHHHHh-cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeC-eEEEcCCCCC
Q psy9575 128 HTLYQRNL-HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESK-ITILATGGGG 187 (786)
Q Consensus 128 ~~L~~~~~-~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~Ak-aVVlATGG~~ 187 (786)
.+++..+. +.|++|++++.|++|+.+++++++||.+.+..+|+...|+|+ .||||+|++.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAID 273 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccC
Confidence 34444444 469999999999999997547899998865223777789997 9999999974
No 208
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.56 E-value=0.2 Score=56.64 Aligned_cols=61 Identities=16% Similarity=0.157 Sum_probs=45.9
Q ss_pred cHHHHHHHHHHHHhcCCc--eEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 122 TGHALLHTLYQRNLHAKT--NFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv--~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+.++...+.+.+++.|+ .+.+++.|+++..++++...-+.+ .+|+ .+.|+.||+|||.++
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~---~~G~--~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT---DRGD--EVSARFLVVAAGPLS 159 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE---TTCC--EEEEEEEEECCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE---CCCC--EEEeCEEEECcCCCC
Confidence 345777888888888887 899999999998775333433433 5675 579999999999765
No 209
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=94.55 E-value=0.0034 Score=69.01 Aligned_cols=50 Identities=24% Similarity=0.438 Sum_probs=32.8
Q ss_pred hhhCcccC--cccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCccccccccccchhhCCCCCC
Q psy9575 694 LYECILCG--CCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSIMNCVDTCPKGLN 769 (786)
Q Consensus 694 ~~~CI~Cg--~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~ 769 (786)
..+|++|+ .|+.+||........ .++ .... ....|+.||.|+.+||.+.-
T Consensus 181 ~~~C~~C~~~~Cv~aCP~gAI~~~~--------------~~g--------~v~i----d~~kCigCg~Cv~~CP~~AI 232 (512)
T 1q16_B 181 PRLCEHCLNPACVATCPSGAIYKRE--------------EDG--------IVLI----DQDKCRGWRMCITGCPYKKI 232 (512)
T ss_dssp EECCCCCSSCHHHHTCTTCCEEEET--------------TTC--------CEEE----CTTTCCCCCCHHHHCTTCCE
T ss_pred CccCcCCCCchhhhhCCcCcEEeec--------------CCC--------eEEE----CHHHCCCchHHHhhCCccce
Confidence 68999999 699999974211000 000 0001 23579999999999998753
No 210
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=94.47 E-value=0.01 Score=58.16 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=38.2
Q ss_pred hhhCc--ccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcchhhHHHhhhccCCCcccccccc------c---cchh
Q psy9575 694 LYECI--LCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDEATNFRLDNLEDPYRLFRCRSI------M---NCVD 762 (786)
Q Consensus 694 ~~~CI--~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C------g---~C~~ 762 (786)
.++|+ .|+.|+.+||.....-. + .......|+.| | .|+.
T Consensus 105 ~~~C~~~~C~~C~~~CP~~Ai~~~----~--------------------------~~~~~~kC~~C~~~~~~G~~p~Cv~ 154 (214)
T 1h0h_B 105 PKTKDLEDYESVISACPYDVPRKV----A--------------------------ESNQMAKCDMCIDRITNGLRPACVT 154 (214)
T ss_dssp GGGGGCSCHHHHHHHCTTCCCEEC----T--------------------------TSSCEECCCTTHHHHTTTCCCHHHH
T ss_pred HHHCccccccHHHHhcCCCCeEec----C--------------------------CCcccCcCCCCcchhhcCCChhHHH
Confidence 67999 99999999997521100 0 00023679999 6 9999
Q ss_pred hCCCCCC----hHHHHHHHHHHHH
Q psy9575 763 TCPKGLN----PNRSINKIKELMI 782 (786)
Q Consensus 763 vCP~gi~----~~~~i~~lr~~~~ 782 (786)
+||++.- ..++....|+.+.
T Consensus 155 ~CP~~Ai~~~~~~~~~~~~~~~~~ 178 (214)
T 1h0h_B 155 SCPTGAMNFGDLSEMEAMASARLA 178 (214)
T ss_dssp HCSSSCEEEEEHHHHHHHHHHHHH
T ss_pred hcCcccEEEccHHHHHHHHHHHHH
Confidence 9998743 4455555554443
No 211
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.41 E-value=0.047 Score=60.22 Aligned_cols=58 Identities=12% Similarity=0.172 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+.++|.+.+++.|++|+++++|.+|+.+++|+++|+.+ .+|+ .++|+.||+|+|-+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~---~~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKS---SDGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEE---TTSC--EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEE---CCCc--EEECCEEEECCCcc
Confidence 4789999999999999999999999999933489999887 5665 58999999999865
No 212
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.40 E-value=0.036 Score=62.14 Aligned_cols=58 Identities=12% Similarity=0.168 Sum_probs=45.1
Q ss_pred HHHHHHhcC-CceEEeceEEEeeeecCCC-CEEEEEEEEcCCC---cEEEEEeCeEEEcCCCCC
Q psy9575 129 TLYQRNLHA-KTNFFIEWMAIDLISDSEG-DILGVVALEMETG---NIMILESKITILATGGGG 187 (786)
Q Consensus 129 ~L~~~~~~~-Gv~i~~~~~v~~L~~~~~g-~v~G~~~~~~~~g---~~~~i~AkaVVlATGG~~ 187 (786)
+++..+++. +++|+.++.|++|+.++++ +++||...+ .+| +...|+|+.||||+|+++
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID-EQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCcccccEEEEeCEEEEccCccC
Confidence 334445555 5999999999999998535 799998865 355 356799999999999985
No 213
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=94.39 E-value=0.06 Score=61.74 Aligned_cols=47 Identities=21% Similarity=0.256 Sum_probs=32.0
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|+|.||+.++ |++||+||+||++.+.. .+ ...|.-.|++|+++++.
T Consensus 412 ~G~i~vd~~~~---------ts~~~VyA~GD~~~~~~----~~----~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 412 NGRVVCTDDEQ---------TTVSNVYAIGDINAGKP----QL----TPVAIQAGRYLARRLFA 458 (598)
T ss_dssp TSCBCCCTTSB---------CSSTTEEECGGGBTTSC----CC----HHHHHHHHHHHHHHHHH
T ss_pred CCcEEeCCCCc---------CCCCCEEEEeeecCCCC----cc----HHHHHHhHHHHHHHHhc
Confidence 35677777666 99999999999962221 12 23455568888887764
No 214
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.34 E-value=0.057 Score=56.55 Aligned_cols=57 Identities=18% Similarity=0.184 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+..+...|.+.+++.|++++.++ ++++..++ +.+. +. . +|. .++++.||+|||..+.
T Consensus 69 ~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~-~~~~-v~---~-~~~--~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 69 GVELTDKFRKQSERFGTTIFTET-VTKVDFSS-KPFK-LF---T-DSK--AILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCC-CCEEECSS-SSEE-EE---C-SSE--EEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC-CEEE-EE---E-CCc--EEEcCEEEECCCCCcC
Confidence 34677788888888899999887 88887664 4322 21 1 343 5889999999998753
No 215
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=94.28 E-value=0.0049 Score=63.68 Aligned_cols=16 Identities=44% Similarity=1.005 Sum_probs=14.8
Q ss_pred hhhCcccC--cccCCCCC
Q psy9575 694 LYECILCG--CCSTACPS 709 (786)
Q Consensus 694 ~~~CI~Cg--~C~~~CP~ 709 (786)
...|++|+ .|+.+||+
T Consensus 97 ~~~C~~C~~~~C~~~CP~ 114 (294)
T 1kqf_B 97 KDGCMHCEDPGCLKACPS 114 (294)
T ss_dssp EESCCCBSSCHHHHHCCS
T ss_pred cccCCCcCChhhhhhCCc
Confidence 57899999 89999998
No 216
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.24 E-value=0.082 Score=55.52 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+.+.|++++.++ ++++.. + +.+ -+.. ..+|+ .+.++.||+|||...
T Consensus 71 ~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~-~~~-~v~~--~~~g~--~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 71 PELMDEMREQALRFGADLRMED-VESVSL-H-GPL-KSVV--TADGQ--THRARAVILAMGAAA 126 (335)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEEC-S-SSS-EEEE--ETTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEee-EEEEEe-C-CcE-EEEE--eCCCC--EEEeCEEEECCCCCc
Confidence 4566777777778899999887 777765 2 221 1101 14553 588999999999854
No 217
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.14 E-value=0.041 Score=61.97 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=44.5
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCC-CCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSE-GDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~-g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+..+...+.+.+++.||+++.+++|+.+..+.+ +...-+.. .+|+ .++++.||+|||...
T Consensus 265 ~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~---~~g~--~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 265 EGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET---ASGA--VLKARSIIIATGAKW 326 (521)
T ss_dssp CHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE---TTSC--EEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE---CCCC--EEEcCEEEECCCCCc
Confidence 4667888888888889999999999999875421 22222222 4564 588999999999754
No 218
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.09 E-value=0.027 Score=62.12 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=31.4
Q ss_pred hcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 135 LHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
++.|++++.++.++.+..+. .. +...++ ...+.++.||||||+..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~-~~------v~~~~g-~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY-VR------VRENGG-EKSYEWDYLVFANGASP 114 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE-EE------EECSSS-EEEEECSEEEECCCEEE
T ss_pred HhcCcEEEecCEEEEEecCC-CE------EEECCc-eEEEEcCEEEECCCCCC
Confidence 45799999999999885442 11 122334 34689999999999754
No 219
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.07 E-value=0.085 Score=58.25 Aligned_cols=44 Identities=20% Similarity=0.247 Sum_probs=31.2
Q ss_pred CcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 339 GIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 339 Gi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
+|.||+.+| |++||+||+||++. +. .+. ..|.-.|++|+++++.
T Consensus 286 ~i~vd~~~~---------t~~~~Iya~GD~~~-~~----~~~----~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 286 AIAIDERCQ---------TSMHNVWAIGDVAG-EP----MLA----HRAMAQGEMVAEIIAG 329 (458)
T ss_dssp EECCCTTCB---------CSSTTEEECGGGGC-SS----CCH----HHHHHHHHHHHHHHTT
T ss_pred EEeECCCCc---------CCCCCEEEeeccCC-Cc----ccH----HHHHHHHHHHHHHhcC
Confidence 566776666 99999999999983 21 122 3455568888888764
No 220
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.06 E-value=0.23 Score=50.63 Aligned_cols=57 Identities=16% Similarity=0.117 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhcC-CceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHA-KTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~-Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++. +++++.. .++++..++ +.. -+ ...+|+ .+.++.||+|||...
T Consensus 55 ~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~-~~~-~v---~~~~g~--~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 55 PGEIIAEARRQIERYPTIHWVEG-RVTDAKGSF-GEF-IV---EIDGGR--RETAGRLILAMGVTD 112 (297)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEES-CEEEEEEET-TEE-EE---EETTSC--EEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcC-CeE-EE---EECCCC--EEEcCEEEECCCCCC
Confidence 456777777888776 7888654 788887765 321 12 224564 588999999999864
No 221
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=94.04 E-value=0.025 Score=70.01 Aligned_cols=65 Identities=18% Similarity=0.317 Sum_probs=49.8
Q ss_pred EEE-EcCCCChhHHHHHHH-chhccCCCcccccCCCCCcccceEEEeC----------Ccccccccccccc--cCcceEE
Q psy9575 575 FLV-NLSSNDKMLLDALHR-IKYDIDDSLTLRRSCREGVCGSDAMNIN----------GKNGLACITNLNE--LKQPIII 640 (786)
Q Consensus 575 ~~v-~~~~~~~tiL~al~~-~~~~~~~~l~~~~~Cr~g~Cg~C~V~vn----------G~~~laC~t~v~~--~~~~~~i 640 (786)
+++ ++++. +|+|+.|+. ++. -....+|..|.||.|.|.|+ |+++.||.+++.. |.++.|+
T Consensus 15 ~~~~~~~p~-~~ll~~LR~~~~l-----tgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Ti 88 (1332)
T 3unc_A 15 VVEKNADPE-TTLLAYLRRKLGL-----RGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTV 88 (1332)
T ss_dssp EEETTCCTT-CBHHHHHHHTSCC-----TTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECG
T ss_pred EEeecCCCC-CCHHHHHhhhcCC-----CCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCCEEEEe
Confidence 444 46666 899999997 222 24457899999999999995 7888999999965 3567788
Q ss_pred CCCCC
Q psy9575 641 RPLPG 645 (786)
Q Consensus 641 ~p~~~ 645 (786)
|-+..
T Consensus 89 Egl~~ 93 (1332)
T 3unc_A 89 EGIGS 93 (1332)
T ss_dssp GGTCC
T ss_pred ccccC
Confidence 88843
No 222
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.86 E-value=0.37 Score=54.29 Aligned_cols=61 Identities=11% Similarity=0.079 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhcCC--ceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAK--TNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~G--v~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+.++...|...+++.+ +.+.++++|+++..++++...-+.+ .+|+ .++|+.||+|||.++.
T Consensus 93 ~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~---~~G~--~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 93 QPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT---NHGD--RIRARYLIMASGQLSV 155 (542)
T ss_dssp HHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE---TTCC--EEEEEEEEECCCSCCC
T ss_pred HHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE---CCCC--EEEeCEEEECcCCCCC
Confidence 3456666666666654 6799999999998765333333333 5675 5889999999998764
No 223
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.82 E-value=0.05 Score=56.63 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++.|++++.++ ++.+..++ +.+.- . .++. .+.++.||+|||...
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~-~~~~v---~--~~~~--~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 61 GPLLMERMHEHATKFETEIIFDH-INKVDLQN-RPFRL---N--GDNG--EYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCC-EEEEECSS-SSEEE---E--ESSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEee-eeEEEecC-CEEEE---E--eCCC--EEEcCEEEECCCCCc
Confidence 34566677777778899999886 88876654 44321 1 2443 578999999999754
No 224
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.77 E-value=0.17 Score=57.05 Aligned_cols=62 Identities=10% Similarity=0.076 Sum_probs=44.6
Q ss_pred cHHHHHHHHHHHHhcCCc--eEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 122 TGHALLHTLYQRNLHAKT--NFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv--~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+.++...+.+.+++.|+ .+.+++.|+++..++++...-+.+ .+|+ .+.|+.||+|||.++.
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~---~~G~--~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL---DNEE--VVTCRFLISATGPLSA 148 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE---TTTE--EEEEEEEEECCCSCBC
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE---CCCC--EEEeCEEEECcCCCCC
Confidence 345677777777777777 788999999998765333333333 5674 5899999999997653
No 225
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=93.68 E-value=0.23 Score=51.35 Aligned_cols=22 Identities=18% Similarity=0.424 Sum_probs=19.8
Q ss_pred ChHhhhcHhCCCCEEEEEecCC
Q psy9575 1 MRASLQLAQEGLNVAILSKVFP 22 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~ 22 (786)
|+||+.|++.|++|+|+||..+
T Consensus 19 l~aA~~l~~~g~~V~liE~~~~ 40 (312)
T 4gcm_A 19 MTAAVYASRANLKTVMIERGIP 40 (312)
T ss_dssp HHHHHHHHHTTCCEEEEESSCT
T ss_pred HHHHHHHHHCCCCEEEEecCCC
Confidence 5799999999999999999755
No 226
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.66 E-value=0.16 Score=52.76 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCC-CcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMET-GNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~-g~~~~i~AkaVVlATGG 185 (786)
..+.+.+.+.+++.||+++.++.+.++..++ +++.++...+..+ |+...+.++.||+|+|-
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 4456677777888999999999999998775 7888888754223 54457899999999993
No 227
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.55 E-value=0.28 Score=50.84 Aligned_cols=56 Identities=13% Similarity=0.073 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++.|++++. ..++++..++ +.+. +.. ++. .+.++.||+|||...
T Consensus 71 ~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~-~~~~-v~~----~~~--~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 71 GSELAKLFADHAANYAKIREG-VEVRSIKKTQ-GGFD-IET----NDD--TYHAKYVIITTGTTH 126 (319)
T ss_dssp HHHHHHHHHHHHHTTSEEEET-CCEEEEEEET-TEEE-EEE----SSS--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeC-CEEE-EEE----CCC--EEEeCEEEECCCCCc
Confidence 345677777888888999887 6788887664 4322 221 333 578999999999754
No 228
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=93.28 E-value=0.51 Score=55.41 Aligned_cols=41 Identities=5% Similarity=0.040 Sum_probs=31.7
Q ss_pred CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 137 AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 137 ~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
.|++|+++++|++|..++ +.|. +.+ .+|+ .+.|+.||+|+.
T Consensus 542 ~gl~I~l~t~V~~I~~~~-~~v~-V~~---~~G~--~i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSG-DEVQ-VTT---TDGT--GYSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSS-SSEE-EEE---TTCC--EEEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcC-CEEE-EEE---CCCc--EEEcCEEEECCC
Confidence 378999999999999876 5543 322 4564 588999999995
No 229
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=93.20 E-value=0.017 Score=58.87 Aligned_cols=16 Identities=19% Similarity=0.511 Sum_probs=15.0
Q ss_pred hhhCcccCc--ccCCCCC
Q psy9575 694 LYECILCGC--CSTACPS 709 (786)
Q Consensus 694 ~~~CI~Cg~--C~~~CP~ 709 (786)
...|++|+. |+.+||+
T Consensus 65 ~~~C~~C~~p~C~~~CP~ 82 (274)
T 1ti6_B 65 PTPCMHCENAPCVAKGNG 82 (274)
T ss_dssp EECCCCCTTCHHHHHTTT
T ss_pred CCcCCCCCChHHHhhChH
Confidence 679999999 9999998
No 230
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=93.14 E-value=0.049 Score=61.50 Aligned_cols=57 Identities=14% Similarity=0.108 Sum_probs=44.6
Q ss_pred HHHHHhcCCceEEeceEEEeeeecCC--CCEEEEEEEEcCCCcEEEE---EeCeEEEcCCCCC
Q psy9575 130 LYQRNLHAKTNFFIEWMAIDLISDSE--GDILGVVALEMETGNIMIL---ESKITILATGGGG 187 (786)
Q Consensus 130 L~~~~~~~Gv~i~~~~~v~~L~~~~~--g~v~G~~~~~~~~g~~~~i---~AkaVVlATGG~~ 187 (786)
+...+++.|++|++++.|++|+.+++ ++++||...+ .+|+.+.+ .+|.||||+|+++
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe-CCCceEEEEeccCCEEEEcCcccC
Confidence 33345567999999999999999852 3899999875 45765555 5699999999985
No 231
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.11 E-value=0.03 Score=63.49 Aligned_cols=58 Identities=24% Similarity=0.299 Sum_probs=44.9
Q ss_pred HHHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcE---EEEEeCeEEEcCCCCC
Q psy9575 129 TLYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNI---MILESKITILATGGGG 187 (786)
Q Consensus 129 ~L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~---~~i~AkaVVlATGG~~ 187 (786)
++.+.+++ .|++|++++.|++|+.++ ++++||.+.+..+|+. ..+.+|.||||+|+++
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 45555555 599999999999999986 8999998865334642 2347899999999976
No 232
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.10 E-value=0.5 Score=51.33 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=32.5
Q ss_pred hcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 135 LHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
++.| +|+++++|+++..++ +.|. +.+ .+|+ .+.|+.||+|+|-
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~-~~v~-v~~---~~g~--~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSG-DVVN-VTV---KDGH--AFQAHSVIVATPM 257 (431)
T ss_dssp TTCS-CEESSCCEEEEECSS-SSEE-EEE---TTSC--CEEEEEEEECSCG
T ss_pred hhCC-ceEeCCEEEEEEEcC-CeEE-EEE---CCCC--EEEeCEEEEecCc
Confidence 3457 999999999998875 5543 332 5564 5889999999984
No 233
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.89 E-value=0.12 Score=54.95 Aligned_cols=44 Identities=30% Similarity=0.270 Sum_probs=36.8
Q ss_pred CCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy9575 353 NDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKKI 406 (786)
Q Consensus 353 ~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~~ 406 (786)
+++.+.+||||+||+.+ |+.| ..+|+.+|.+||.+|+..+++..
T Consensus 322 tle~k~~~~Lf~AGqi~--G~~G--------y~eAaa~Gl~AG~naa~~~~g~~ 365 (443)
T 3g5s_A 322 TLEFREAEGLYAAGVLA--GVEG--------YLESAATGFLAGLNAARKALGLP 365 (443)
T ss_dssp TSEETTEEEEEECGGGG--TBCS--------HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hceecCCCCEEECcccc--ccHH--------HHHHHHhHHHHHHHHHHHhcCCC
Confidence 34456899999999998 6554 56999999999999999998765
No 234
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=92.85 E-value=0.058 Score=58.08 Aligned_cols=45 Identities=11% Similarity=0.138 Sum_probs=33.8
Q ss_pred HhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+++.||+++.+++|+.+..++ ..| .+ .+|+ .+.++.+|||||+..
T Consensus 72 ~~~~~i~~~~~~~V~~id~~~-~~v---~~---~~g~--~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPNN-KLV---TL---KSGE--KIKYEKLIIASGSIA 116 (385)
T ss_dssp HHHTTCEEECSCCEEEEETTT-TEE---EE---TTSC--EEECSEEEECCCEEE
T ss_pred HHHCCCEEEeCCEEEEEECCC-CEE---EE---CCCC--EEECCEEEEecCCCc
Confidence 346799999999999997764 432 22 4564 578999999999754
No 235
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=92.76 E-value=0.053 Score=59.90 Aligned_cols=52 Identities=21% Similarity=0.224 Sum_probs=38.8
Q ss_pred ccCcccCCCCcccccCCCCCcc-cCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKI-VNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~-IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
.|||.+|+.+| |+ +||+||+|||+ .+..| .+..++..|+.++.+++..+...
T Consensus 345 ~g~i~vn~~~r---------t~~~p~vya~Gd~~-~g~~~-------~i~~a~~~g~~aa~~i~~~l~~~ 397 (460)
T 1cjc_A 345 KLGVVPNMEGR---------VVDVPGLYCSGWVK-RGPTG-------VITTTMTDSFLTGQILLQDLKAG 397 (460)
T ss_dssp TTTBCCEETTE---------ETTCTTEEECTHHH-HCTTC-------CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeeECCCCc---------CcCCCCEEEEEeCC-cCCCc-------cHHHHHHHHHHHHHHHHHHHHhC
Confidence 47777777777 77 89999999998 34322 13456777999999999887653
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.72 E-value=0.3 Score=50.92 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=45.8
Q ss_pred HHHHHHhcC-CceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 129 TLYQRNLHA-KTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 129 ~L~~~~~~~-Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
.+.+.+.+. ||+++.++.+.++..++ +++.++...+..+|+...+.++.||+|+|-
T Consensus 213 ~~~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 213 IMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred HHHHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 344555555 99999999999999886 789999887766676678999999999993
No 237
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.42 E-value=0.065 Score=57.27 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=34.4
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
+||.||+.+| |++||+||+||++ ...|. .. .....|.-.|++|+++++.
T Consensus 248 ~gi~Vd~~~~---------t~~~~IyA~GD~a--~~~~~--~~-~~~~~A~~qg~~aa~~i~g 296 (367)
T 1xhc_A 248 RGILIDDNFR---------TSAKDVYAIGDCA--EYSGI--IA-GTAKAAMEQARVLADILKG 296 (367)
T ss_dssp SSEECCTTSB---------CSSTTEEECGGGE--EBTTB--CC-CSHHHHHHHHHHHHHHHTT
T ss_pred CCEEECCCcc---------cCCCCEEEeEeee--ecCCC--Cc-cHHHHHHHHHHHHHHHhcC
Confidence 5799998888 9999999999998 22221 00 1234556668888888764
No 238
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.27 E-value=0.076 Score=57.71 Aligned_cols=52 Identities=19% Similarity=0.368 Sum_probs=36.2
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCC--CCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVH--GANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~--Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
+||.||+.++ |++||+||+|||+. ..+ |. +..-.....|...|++|+++++.
T Consensus 255 ~gi~vd~~~~---------t~~~~IyA~GD~a~-~~~~~g~-~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 255 RGVIVDHCGA---------TLAKGVFAVGDVAS-WPLRAGG-RRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp SSEECCTTSB---------CSSTTEEECGGGEE-EEBTTSS-EECCCCHHHHHHHHHHHHHHHTT
T ss_pred CeEEEccCee---------ECCCCEEEEEccee-ccCCCCC-eeeechHHHHHHHHHHHHHHHcC
Confidence 6799998887 99999999999983 211 11 11111246677778888888774
No 239
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.21 E-value=0.4 Score=49.36 Aligned_cols=54 Identities=13% Similarity=0.228 Sum_probs=44.0
Q ss_pred HHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 130 LYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 130 L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
+.+.+++ .||+++.++.++++..++ +++.++...+..+|+...+.++.||+|+|
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred HHHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 4455666 599999999999998775 78888888764567766799999999998
No 240
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=92.13 E-value=0.12 Score=56.50 Aligned_cols=59 Identities=8% Similarity=-0.026 Sum_probs=40.1
Q ss_pred ccCcccCCCCcccccCCCCCc-ccCceeeecccCCccCCCC--CccC---hhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNK-IVNGLYAIGECACVSVHGA--NRLG---TNSLLDLLVFGRSAGNHILSLELKKI 406 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t-~IpGLyAaGe~a~gg~~Ga--~rlg---g~~l~~a~v~G~~Ag~~aa~~~~~~~ 406 (786)
.|.|.||+..| | +.||+||+|||+. +.+. ..++ .-....|...|+.|+++++.++.+..
T Consensus 283 ~G~i~Vd~~l~---------t~~~~~Ifa~GD~~~--~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~ 347 (437)
T 3sx6_A 283 GGFVLVDEHQR---------SKKYANIFAAGIAIA--IPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRK 347 (437)
T ss_dssp TSCBCBCTTSB---------BSSCTTEEECGGGBC--CCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcEEeChhcc---------CCCCCCEEEEEEEec--cCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45677777766 5 8999999999983 2211 1110 12344566779999999999987654
No 241
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=92.03 E-value=0.74 Score=53.21 Aligned_cols=65 Identities=17% Similarity=0.125 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCC---ceEEeceEEEeeeecC------CCCEEEEEEEEc----------------------------
Q psy9575 124 HALLHTLYQRNLHAK---TNFFIEWMAIDLISDS------EGDILGVVALEM---------------------------- 166 (786)
Q Consensus 124 ~~i~~~L~~~~~~~G---v~i~~~~~v~~L~~~~------~g~v~G~~~~~~---------------------------- 166 (786)
..+.+.|.+.+++.| |+|..++.++++..++ ++.-+.+.+.+.
T Consensus 119 ~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 198 (665)
T 1pn0_A 119 GRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEE 198 (665)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccccccccccc
Confidence 357788888888877 9999999999998764 122234444331
Q ss_pred -----------CCCcEEEEEeCeEEEcCCCCCc
Q psy9575 167 -----------ETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 167 -----------~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+|+...++|+.||-|.|+.+.
T Consensus 199 ~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~ 231 (665)
T 1pn0_A 199 EDANYRLPEGKEAGEIETVHCKYVIGCDGGHSW 231 (665)
T ss_dssp HHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCH
T ss_pred ccccccccccCCCCceEEEEeCEEEeccCCCCH
Confidence 2465567999999999999874
No 242
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=91.86 E-value=0.18 Score=57.95 Aligned_cols=52 Identities=12% Similarity=0.254 Sum_probs=44.9
Q ss_pred CCceEEeceEEEeeeecCC-CCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 137 AKTNFFIEWMAIDLISDSE-GDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 137 ~Gv~i~~~~~v~~L~~~~~-g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.|++|++++.|++|+.+++ +++.||.+.+..+|+...+.|+.||||+|....
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s 325 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHN 325 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCC
Confidence 4899999999999998742 499999998866788888999999999998763
No 243
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.84 E-value=0.046 Score=60.28 Aligned_cols=48 Identities=15% Similarity=0.112 Sum_probs=33.9
Q ss_pred HhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+++.|++++.++.|+.+..++ +.+ -+. . . ++...+.++.+|||||+..
T Consensus 68 ~~~~gi~~~~~~~V~~id~~~-~~v-~v~--~-~-~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 68 LRRQKIQLLLNREVVAMDVEN-QLI-AWT--R-K-EEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp HHHTTEEEECSCEEEEEETTT-TEE-EEE--E-T-TEEEEEECSEEEECCCCCB
T ss_pred HHHCCCEEEECCEEEEEECCC-CEE-EEE--e-c-CceEEEEcCEEEECCCccc
Confidence 345799999999999987764 432 222 1 2 2345789999999999854
No 244
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=91.68 E-value=0.19 Score=54.14 Aligned_cols=56 Identities=14% Similarity=0.180 Sum_probs=36.9
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKKI 406 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~~ 406 (786)
|.|.||++ +++.|+.||+||+|||+. +. +.-.++ ..|.-.|.+++++++..+++..
T Consensus 272 G~i~VD~~-------tl~~t~~p~VfAiGDva~-~~-~~pk~a----~~A~~qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 272 GWCPVDIR-------TFESSLQPGIHVIGDACN-AA-PMPKSA----YSANSQAKVAAAAVVALLKGEE 327 (401)
T ss_dssp SSBCBCTT-------TCBBSSSTTEEECGGGBC-CT-TSCBSH----HHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEECCC-------cceecCCCCEEEeccccc-CC-CCCchH----HHHHHHHHHHHHHHHHHhcCCC
Confidence 44666554 233589999999999983 22 111222 2355569999999999987753
No 245
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=91.68 E-value=0.13 Score=63.95 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=43.9
Q ss_pred EEEE-cCCCChhHHHHHHHchhccCCCcc-cccCCCCCcccceEEEeC------Ccc----cccccccccc--cCcceEE
Q psy9575 575 FLVN-LSSNDKMLLDALHRIKYDIDDSLT-LRRSCREGVCGSDAMNIN------GKN----GLACITNLNE--LKQPIII 640 (786)
Q Consensus 575 ~~v~-~~~~~~tiL~al~~~~~~~~~~l~-~~~~Cr~g~Cg~C~V~vn------G~~----~laC~t~v~~--~~~~~~i 640 (786)
++++ +++. +|||+-||.- . .|+ ...+|..|-||.|.|.|. ++. +=||-+++-. |..++|+
T Consensus 19 v~~~~~~p~-~tLl~~LR~~-~----~ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~~~g~~v~Tv 92 (1335)
T 3zyv_A 19 VTERNADPE-VNLLFYLRKV-I----RLTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICSLHGAAVTTV 92 (1335)
T ss_dssp EEESSCCTT-CBHHHHHHHT-T----CCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECH
T ss_pred EEeCCCCcC-ccHHHHHhcc-C----CCcccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHHhcCCEEEee
Confidence 4443 3444 9999999982 1 122 235899999999999983 332 2299999865 4677788
Q ss_pred CCCC
Q psy9575 641 RPLP 644 (786)
Q Consensus 641 ~p~~ 644 (786)
|-+.
T Consensus 93 Eglg 96 (1335)
T 3zyv_A 93 EGIG 96 (1335)
T ss_dssp HHHC
T ss_pred CCCC
Confidence 8773
No 246
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=91.58 E-value=0.071 Score=57.79 Aligned_cols=53 Identities=19% Similarity=0.235 Sum_probs=36.3
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccC--CCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSV--HGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~--~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
+||.||+.++ |++||+||+|||+.... .| .++.-.+...|...|++|+++++.
T Consensus 255 ~Gi~vd~~~~---------t~~~~iya~GD~a~~~~~~~g-~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 255 AGIIVDQQLL---------TSDPHISAIGDCALFESVRFG-ETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp SSEEECTTSB---------CSSTTEEECGGGEEEEETTTT-EEECCCSHHHHHHHHHHHHHHTTT
T ss_pred CCEEECCCcc---------cCCCCEEEeecceeecCccCC-ceeeehHHHHHHHHHHHHHHHhCC
Confidence 5699999888 99999999999983211 11 111122356677778888887764
No 247
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=91.41 E-value=0.3 Score=52.79 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++.||+|+.++.+.++..++ +++.++.. .+|+ .+.|+.||+|+|-..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~---~dG~--~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVL---SDGN--TLPCDLVVVGVGVIP 241 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE---TTSC--EEECSEEEECCCEEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEe---CCCC--EEEcCEEEECcCCcc
Confidence 34677788888888999999999999998875 78888776 5675 588999999999543
No 248
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=91.38 E-value=0.17 Score=55.18 Aligned_cols=58 Identities=9% Similarity=0.070 Sum_probs=38.6
Q ss_pred CcccCCCCcccccCCCCCcccCceeeecccCCccCCCC--Ccc---ChhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy9575 339 GIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGA--NRL---GTNSLLDLLVFGRSAGNHILSLELKKI 406 (786)
Q Consensus 339 Gi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga--~rl---gg~~l~~a~v~G~~Ag~~aa~~~~~~~ 406 (786)
.|.||+..| .+++||+||+||++. ..+. ..+ .......|...|++|+++++.++.+.+
T Consensus 274 ~i~Vd~~l~--------t~~~~~Ifa~GD~~~--~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 274 MVIVNRCFQ--------NPTYKNIFGVGVVTA--IPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CBCCCTTSB--------CSSSTTEEECSTTBC--CCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEecCcccc--------CCCCCCEEEEEeeec--cCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 477777666 138999999999983 2211 010 012345567779999999999987653
No 249
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.07 E-value=0.19 Score=55.36 Aligned_cols=57 Identities=9% Similarity=0.056 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeec--CCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISD--SEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~--~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.++|.+.+++.|++|+.+++|++|..+ + ++++|+.. +|+ .+.|+.||+|+|.++
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~-~~~~~V~~----~g~--~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT-GKFEGVKT----KLG--TFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTT-TEEEEEEE----TTE--EEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC-CeEEEEEE----CCe--EEECCEEEECCCccc
Confidence 478999999999999999999999999987 6 88888765 353 589999999999875
No 250
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=90.78 E-value=1.6 Score=48.33 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
..+.++|.+.+.+.|++|..+++|+++..++ ++| +. .+|+ .+.|+.||.++-
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~~v---~~---~~G~--~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANN-KTV---TL---QDGT--TIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTT-TEE---EE---TTSC--EEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccC-CEE---EE---cCCC--EEECCEEEECCC
Confidence 5688999999988999999999999998875 543 22 5675 578999998754
No 251
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=90.75 E-value=0.036 Score=63.33 Aligned_cols=42 Identities=17% Similarity=0.043 Sum_probs=34.6
Q ss_pred ccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 358 IVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 358 ~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
.-+|++.+||++ +.+ +.+.|.++.-|+..|..+++.+++.++
T Consensus 345 ~~~rv~LvGDAA-h~~---~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 345 TFPGGLLIGCSP-GFM---NVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp EETTEEECTTTT-CCC---BTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCEEEEcccc-ccc---CccccccHHHHHHHHHHHHHHHHHHHH
Confidence 468999999998 233 557888999999999999999887764
No 252
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.71 E-value=0.15 Score=55.79 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+.++|.+.+++.|++|+.+++|++|..++ +++.|+.. +|+ .++|+.||+|+|.+..
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~----~g~--~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKS----EGE--VARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEE----TTE--EEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEE----CCe--EEECCEEEECCCCCcc
Confidence 5789999999999999999999999999886 88888753 454 5899999999997753
No 253
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=90.69 E-value=0.17 Score=57.95 Aligned_cols=20 Identities=30% Similarity=0.370 Sum_probs=18.1
Q ss_pred ChHhhhcHhCCCCEEEEEec
Q psy9575 1 MRASLQLAQEGLNVAILSKV 20 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~ 20 (786)
|+||+.|++.|.+|+|+|+.
T Consensus 120 l~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 120 LAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp HHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHhCCCeEEEEecc
Confidence 57999999999999999984
No 254
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=90.68 E-value=0.11 Score=57.13 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=36.1
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
.|||.+|+.++| |++||+||+||++ .+..| + ...+...|+.++.+++..+..
T Consensus 337 ~g~i~vn~~~rv--------t~~pgvya~GD~~-~gp~~---~----i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 337 QSGTIPNVGGRI--------NGSPNEYVVGWIK-RGPTG---V----IGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TTTBCCEETTEE--------TTCSSEEECTHHH-HCSCS---C----TTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeECCCCcC--------CCCCCEEEEeccC-CCCch---h----HHHHHHHHHHHHHHHHHHHHh
Confidence 456666666653 6799999999998 34332 1 224556689999998887754
No 255
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=90.60 E-value=0.13 Score=58.30 Aligned_cols=48 Identities=8% Similarity=0.060 Sum_probs=35.9
Q ss_pred cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 136 HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.|++++.+++|+++..++ +. +.+.+..+|+...+.++.||||||+..
T Consensus 70 ~~~i~~~~~~~V~~id~~~-~~---v~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAA-KL---VTVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp HHCCEEETTEEEEEEETTT-TE---EEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred hcCcEEEECCEEEEEECCC-CE---EEEEecCCCCeEEEECCEEEECCCCCC
Confidence 4699999999999997764 43 233333456666789999999999854
No 256
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=90.53 E-value=0.02 Score=56.03 Aligned_cols=18 Identities=11% Similarity=0.266 Sum_probs=15.9
Q ss_pred cccc--ccccchhhCCCCCC
Q psy9575 752 FRCR--SIMNCVDTCPKGLN 769 (786)
Q Consensus 752 ~~C~--~Cg~C~~vCP~gi~ 769 (786)
..|+ .|+.|+.+||.+.-
T Consensus 106 ~~C~~~~C~~C~~~CP~~Ai 125 (214)
T 1h0h_B 106 KTKDLEDYESVISACPYDVP 125 (214)
T ss_dssp GGGGCSCHHHHHHHCTTCCC
T ss_pred HHCccccccHHHHhcCCCCe
Confidence 5799 99999999998864
No 257
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=90.48 E-value=0.12 Score=56.11 Aligned_cols=52 Identities=19% Similarity=0.351 Sum_probs=36.1
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccCh----hhhHHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGT----NSLLDLLVFGRSAGNHILSL 401 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg----~~l~~a~v~G~~Ag~~aa~~ 401 (786)
+||.||+.+| |++||+||+|||+. ..+- ..|. .....|.-.|++|+.+++..
T Consensus 253 ~gi~Vd~~~~---------t~~~~IyA~GD~~~-~~~~--~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 308 (408)
T 2gqw_A 253 DGIFVDAYGR---------TTCPDVYALGDVTR-QRNP--LSGRFERIETWSNAQNQGIAVARHLVDP 308 (408)
T ss_dssp SSEECCTTCB---------CSSTTEEECGGGEE-EEET--TTTEEECCCCHHHHHHHHHHHHHHHHCT
T ss_pred CCEEECCCCc---------cCCCCEEEEEEEEE-ecCc--cCCceeeccHHHHHHHHHHHHHHHhcCC
Confidence 5699998888 99999999999983 2210 0111 12456777799999888753
No 258
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=90.46 E-value=0.11 Score=57.26 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=35.7
Q ss_pred HhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+++.|++++.++.++.+..++ +. +.+.+..+|+...+.++.+|+|||+...
T Consensus 68 ~~~~gv~~~~~~~v~~i~~~~-~~---v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 68 LSNLGANVQMRHQVTNVDPET-KT---IKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp HHHTTCEEEESEEEEEEEGGG-TE---EEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHHcCCEEEeCCEEEEEEcCC-CE---EEEEecCCCceEEEECCEEEEccCCCcC
Confidence 345799999999999987664 43 2333323444457899999999997553
No 259
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=90.45 E-value=0.13 Score=57.11 Aligned_cols=48 Identities=10% Similarity=0.057 Sum_probs=34.4
Q ss_pred cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 136 HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.|++++.++.++.+..++ +.| .+.+..+|+...+.++.||+|||+..
T Consensus 105 ~~gv~~~~~~~v~~i~~~~-~~v---~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEK-KIV---YAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp TTCCEEESSEEEEEEETTT-TEE---EEEETTTCCEEEEECSEEEECCCEEE
T ss_pred hcCCEEEeCCEEEEEECCC-CEE---EEEEcCCCceEEEEcCEEEECCCCcc
Confidence 4599999999999987664 432 23222346545689999999999754
No 260
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=90.09 E-value=0.18 Score=56.17 Aligned_cols=48 Identities=19% Similarity=0.146 Sum_probs=33.7
Q ss_pred HhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+++.||+++.++.++.+..++ +.| .+.. +|+...+.++.||||||+..
T Consensus 102 ~~~~gv~v~~~~~v~~i~~~~-~~v---~v~~--~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 102 LESLGAKVYMESPVQSIDYDA-KTV---TALV--DGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp HHHTTCEEETTCCEEEEETTT-TEE---EEEE--TTEEEEEECSEEEECCCEEE
T ss_pred HHhCCCEEEeCCEEEEEECCC-CEE---EEEe--CCcEEEEECCEEEECCCCCc
Confidence 345799999999999887664 432 2210 34345689999999999754
No 261
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=90.04 E-value=0.32 Score=52.54 Aligned_cols=52 Identities=25% Similarity=0.293 Sum_probs=37.1
Q ss_pred ccCcccCCCCcccccCCCCCc-ccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNK-IVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t-~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
.|.|.||+..| | +.||+||+||++ ++ +...+ ...|...|++|+++++..+..
T Consensus 285 ~G~i~vd~~~~---------~~~~~~vfa~GD~~--~~-~~~~~----~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 285 GGFIPTDLNMV---------SIKYDNVYAVGDAN--SM-TVPKL----GYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp TSCBCBBTTSB---------BSSCTTEEECGGGB--TT-CCSCC----HHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEeCcccc---------cCCCCCEEEeehhc--cC-CCCcH----HHHHHHHHHHHHHHHHHHhcC
Confidence 45588887776 5 899999999998 32 11122 334666699999999998843
No 262
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=89.95 E-value=0.17 Score=54.23 Aligned_cols=45 Identities=9% Similarity=-0.025 Sum_probs=31.2
Q ss_pred HhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+++.|++++.++.++.+..++ ..| .+ .++ .+.++.+|+|||+...
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~~-~~v---~~---~~~---~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPGH-QRI---WI---GEE---EVRYRDLVLAWGAEPI 114 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGGG-TEE---EE---TTE---EEECSEEEECCCEEEC
T ss_pred HHhCCcEEEeCCEEEEEECCC-CEE---EE---CCc---EEECCEEEEeCCCCcC
Confidence 345789999888888776553 332 11 222 5889999999998653
No 263
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=89.84 E-value=0.93 Score=50.76 Aligned_cols=46 Identities=22% Similarity=0.225 Sum_probs=33.5
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.|.|.||+.+| |++||+||+|||+ +.. .+. ..|.-.|++|+.+++.
T Consensus 332 ~G~i~Vd~~~~---------t~~~~IyA~GD~~-~~~----~~~----~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 332 KGEVLVNEYLQ---------TSVPNVYAVGDLI-GGP----MEM----FKARKSGCYAARNVMG 377 (523)
T ss_dssp TSCBCCCTTSB---------CSSTTEEECGGGG-CSS----CSH----HHHHHHHHHHHHHHTT
T ss_pred CCCEEECCCCc---------cCCCCEEEEeecC-CCc----ccH----HHHHHHHHHHHHHHcC
Confidence 46688888777 9999999999998 221 122 3455668888888764
No 264
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.50 E-value=0.65 Score=47.67 Aligned_cols=51 Identities=16% Similarity=0.102 Sum_probs=42.3
Q ss_pred hcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 135 LHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
++.||+|+.++.+.++..++ +++.++.+. ..+|+...+.++.||+|+|-..
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDK-MGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp HCTTEEEECSCEEEEEEEET-TEEEEEEEE-CTTSCEEEECCSCEEECSCEEE
T ss_pred hcCCeEEEeCcEEEEEEcCC-CcEEEEEEE-cCCCCeEEeecCeEEEEEcCCC
Confidence 46799999999999998875 788888775 3578767899999999999544
No 265
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=89.46 E-value=0.14 Score=55.87 Aligned_cols=46 Identities=22% Similarity=0.258 Sum_probs=33.4
Q ss_pred HhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+++.||+++.++.|+.+..++ .. +.+ .+|+ .+.++.||+|||+...
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~-~~---v~~---~~g~--~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDR-QQ---VIL---SDGR--ALDYDRLVLATGGRPR 115 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTT-TE---EEE---TTSC--EEECSEEEECCCEEEC
T ss_pred HHhCCCEEEeCCEEEEEECCC-CE---EEE---CCCC--EEECCEEEEcCCCCcc
Confidence 346799999999998887654 32 222 4564 5889999999998553
No 266
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=89.20 E-value=0.058 Score=58.04 Aligned_cols=19 Identities=32% Similarity=0.702 Sum_probs=16.3
Q ss_pred cccccccccchhhCCCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKGLN 769 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~gi~ 769 (786)
...|+.||.|+.+||.++.
T Consensus 283 ~~~Ci~Cg~Ci~~CP~~~~ 301 (418)
T 3mm5_A 283 NRECVRCMHCINKMPKALK 301 (418)
T ss_dssp TTTCCCCCHHHHHCTTTEE
T ss_pred hhhcCccChhHHhCcHhhc
Confidence 3579999999999998764
No 267
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=89.18 E-value=0.027 Score=60.04 Aligned_cols=17 Identities=29% Similarity=0.628 Sum_probs=15.2
Q ss_pred cccccccccchhhCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~g 767 (786)
...|+.||.|+.+||.+
T Consensus 238 ~~~C~~Cg~C~~~CP~~ 254 (366)
T 3mm5_B 238 VEKCMYCGNCYTMCPGM 254 (366)
T ss_dssp GGGCCCCCHHHHHCTTC
T ss_pred hhhCCCcchHHHhCCHh
Confidence 35799999999999996
No 268
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=88.95 E-value=1.7 Score=46.50 Aligned_cols=46 Identities=11% Similarity=0.100 Sum_probs=34.2
Q ss_pred CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 137 AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 137 ~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+..|.+++.++++..++++.|. +.. .+|+ .++|+.||-|.|..+.
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v~-v~~---~dG~--~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGIK-IFF---ADGS--HENVDVLVGADGSNSK 167 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCEE-EEE---TTSC--EEEESEEEECCCTTCH
T ss_pred ccceEEEEEEEEeeeEcCCCeEE-EEE---CCCC--EEEeeEEEECCCCCcc
Confidence 35678899999999876545442 332 6775 5789999999998874
No 269
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=88.92 E-value=0.37 Score=52.51 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=36.8
Q ss_pred CcccCCCCcccccCCCCCcccCceeeecccCCccCCCCC---ccCh--hhhHHHHHHHHHHHHHHHHHhhhcc
Q psy9575 339 GIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGAN---RLGT--NSLLDLLVFGRSAGNHILSLELKKI 406 (786)
Q Consensus 339 Gi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~---rlgg--~~l~~a~v~G~~Ag~~aa~~~~~~~ 406 (786)
.|.||+..| .|+.|++||+|||+ .+.+.+ ...+ -.-..|.-.|+.++++++..+++.+
T Consensus 274 ~i~vd~~lq--------~t~~~~IfAiGD~a--~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 274 MVIVNRCFQ--------NPTYKNIFGVGVVT--AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CBCCCTTSB--------CSSSTTEEECSTTB--CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEeccccc--------CCCCCCEEEeccEE--ecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 355666555 48999999999998 332110 0011 1112455669999999999887653
No 270
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.85 E-value=0.3 Score=59.58 Aligned_cols=17 Identities=35% Similarity=0.806 Sum_probs=15.3
Q ss_pred chhhCcccCcccCCCCC
Q psy9575 693 GLYECILCGCCSTACPS 709 (786)
Q Consensus 693 ~~~~CI~Cg~C~~~CP~ 709 (786)
+.++|+.||.|+.+||.
T Consensus 949 d~~~C~~Cg~C~~~CP~ 965 (1025)
T 1gte_A 949 DEEMCINCGKCYMTCND 965 (1025)
T ss_dssp CTTTCCCCCHHHHHHHH
T ss_pred EcccCcccCHHHHhcCc
Confidence 36899999999999996
No 271
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=88.81 E-value=0.68 Score=48.82 Aligned_cols=57 Identities=12% Similarity=0.189 Sum_probs=45.1
Q ss_pred HHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 126 LLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 126 i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
+...|.+..++.||+++.++.+.++..++ +++.++.+. ..+|+...+.++.||+|+|
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~-~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLR-SSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEE-ETTCCEEEEECSEEEECCC
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEE-ecCCCeEEEeCCEEEECCC
Confidence 44455666667799999999999998875 788787764 2467656789999999999
No 272
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=88.65 E-value=0.14 Score=57.12 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=32.9
Q ss_pred hcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 135 LHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+.||+++.++.|+.+..++ ..| .+ .+|+ .+.++.+|||||+...
T Consensus 101 ~~~gv~~~~g~~v~~id~~~-~~V---~~---~~g~--~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 101 ENGGVAVLTGKKVVQLDVRD-NMV---KL---NDGS--QITYEKCLIATGGTPR 145 (493)
T ss_dssp TTCEEEEEETCCEEEEEGGG-TEE---EE---TTSC--EEEEEEEEECCCEEEC
T ss_pred hcCCeEEEcCCEEEEEECCC-CEE---EE---CCCC--EEECCEEEECCCCCCC
Confidence 35699999999999887664 332 22 4564 5789999999997553
No 273
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=88.23 E-value=1.6 Score=45.23 Aligned_cols=58 Identities=14% Similarity=0.193 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 125 ALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 125 ~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
.+...|.+.+++.||+++.++.+.++..+ +++.++...+..+|+...+.++.||+|+|
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecCEEEEeec
Confidence 45566777777789999999999999873 67777776543367656789999999999
No 274
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=87.91 E-value=0.19 Score=55.25 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=36.0
Q ss_pred HhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 134 NLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 134 ~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
+++.||+++.++.++.+..++ +.| .+.+..+|+...+.++.+|||||+...
T Consensus 66 ~~~~gv~~~~~~~v~~i~~~~-~~v---~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 66 MESRGVNVFSNTEITAIQPKE-HQV---TVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp HHHTTCEEEETEEEEEEETTT-TEE---EEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHHCCCEEEECCEEEEEeCCC-CEE---EEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 345799999999999987664 432 232223465556899999999997643
No 275
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=87.89 E-value=1.5 Score=45.39 Aligned_cols=55 Identities=16% Similarity=0.224 Sum_probs=42.5
Q ss_pred HHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 130 LYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 130 L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
+.+++.+ .||+|+.++.++++..+ +++.++...+..+|+...+.++.||+|+|-.
T Consensus 193 ~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 193 AQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 4445554 59999999999999864 6788887765446766678999999999743
No 276
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=87.70 E-value=0.39 Score=47.35 Aligned_cols=36 Identities=31% Similarity=0.538 Sum_probs=27.8
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLE 402 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~ 402 (786)
|++|||||+||++ .+| ..+.++-+|+.+|+++.+.+
T Consensus 196 t~~p~iya~G~~a---~~g-------~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV---REG-------DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT---SCC-------CHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc---cCc-------cHHHHHHHHHHHHHHHHhhc
Confidence 7899999999998 233 34456677999999987654
No 277
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=87.68 E-value=1.5 Score=48.50 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+...+.+.+++.||+|+.++.+.++..++++.+ .+...+..+|+...+.++.||+|+|-.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 45566777788889999999999999987653443 455555344556678999999999954
No 278
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.59 E-value=1.6 Score=44.85 Aligned_cols=54 Identities=17% Similarity=0.208 Sum_probs=42.5
Q ss_pred HHHHhcC-CceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 131 YQRNLHA-KTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 131 ~~~~~~~-Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
.+.+.+. ||+++.++.+.++..+ +++.++...+..+|+...+.++.||+|+|-.
T Consensus 196 ~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 196 VETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 3445444 9999999999999765 6788888776556876678999999999943
No 279
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=87.54 E-value=1.4 Score=45.15 Aligned_cols=55 Identities=11% Similarity=0.117 Sum_probs=42.3
Q ss_pred HHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 130 LYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 130 L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
+.+.+.+ .||+++.++.+.++..++ +++.++...+..+|+...+.++.||+|+|-
T Consensus 184 ~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 184 TLEHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 4445554 699999999999998775 677777765434676667899999999983
No 280
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=87.00 E-value=1.5 Score=48.92 Aligned_cols=54 Identities=11% Similarity=0.211 Sum_probs=44.4
Q ss_pred HHHHHhc-CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 130 LYQRNLH-AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 130 L~~~~~~-~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
+.+.+++ .||+++.++.++++..++ +++.++...+..+|+...+.++.||+|+|
T Consensus 396 l~~~l~~~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 396 LQDKVRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp HHHHHTTCTTEEEECSEEEEEEEECS-SSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEcCC-CcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 4455566 599999999999998775 78989888765567767899999999999
No 281
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=86.98 E-value=2 Score=47.28 Aligned_cols=63 Identities=13% Similarity=0.169 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 125 ALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 125 ~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+...+.+.+++.||+|+.++.++++..++++..+.+...+..+|+...+.++.||+|+|-..
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCc
Confidence 455677777888999999999999998721144555555332345445789999999999654
No 282
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=86.79 E-value=0.49 Score=52.70 Aligned_cols=52 Identities=19% Similarity=0.181 Sum_probs=36.2
Q ss_pred cccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHh
Q psy9575 336 QMGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLE 402 (786)
Q Consensus 336 t~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~ 402 (786)
..|+|.||+..|+ ++.|++||+|||+..+.. ..+. .|.-.|..+++++...+
T Consensus 349 ~~g~I~Vd~~lq~--------~~~~~IfAiGD~a~~~~p---~~a~----~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 349 SKRGLAVNDFLQV--------KGSNNIFAIGDNAFAGLP---PTAQ----VAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp CCSSEEBCTTSBB--------TTCSSEEECGGGEESSSC---CCHH----HHHHHHHHHHHHHHHHT
T ss_pred CCCceeECCcccc--------CCCCCEEEEEcccCCCCC---CchH----HHHHHHHHHHHHHHHHh
Confidence 3588999998882 479999999999832221 1233 34555888888887654
No 283
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.44 E-value=1.3 Score=45.87 Aligned_cols=52 Identities=23% Similarity=0.262 Sum_probs=42.1
Q ss_pred HHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 131 YQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 131 ~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
.+.+++.||+++.++.+.++..++ + +.++...+..+|+...+.++.||+|+|
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~~-~-~~~v~~~~~~~g~~~~~~~D~vv~a~G 247 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGED-K-IEQLVLEEVKGDRKEILEIDDLIVNYG 247 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECSS-S-CCEEEEEETTSCCEEEEECSEEEECCC
T ss_pred HHHHhcCCeEEEeCceeeEEecCC-c-eEEEEEEecCCCceEEEECCEEEEeec
Confidence 344667899999999999998764 4 677877765666677899999999999
No 284
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=86.36 E-value=2 Score=44.44 Aligned_cols=50 Identities=16% Similarity=0.181 Sum_probs=40.6
Q ss_pred hcCCceEEeceEEEeeeecCCC--CEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 135 LHAKTNFFIEWMAIDLISDSEG--DILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~~g--~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
++.||+++.++.+.++..++ + ++.++...+..+|+...+.++.||+|+|-
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDG-ERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp TCTTEEEECSEEEEEEEESS-SSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hCCCeeEecCCceEEEeCCC-CccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 46799999999999998764 4 78888776544676667999999999994
No 285
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=86.32 E-value=1.4 Score=48.27 Aligned_cols=57 Identities=9% Similarity=0.044 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
...+...+.+.+++.||+|++++.+.++..++ +++ ++.. .+| .+.++.||+|+|-..
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~---~~g---~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLET---SEQ---EISCDSGIFALNLHP 244 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEE---SSC---EEEESEEEECSCCBC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEE---CCC---EEEeCEEEECcCCCC
Confidence 35677788888888999999999999998765 666 4443 444 589999999999543
No 286
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=86.13 E-value=2.1 Score=47.26 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
..+.+.+.+.+++.||+++.++.+.++...+++. +.+...+..+|+...+.++.||+|+|
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~-~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQ-LQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSC-EEEEEEETTTTEEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCc-EEEEEEeCCCCeeEEEECCEEEEccc
Confidence 4677778888888999999999999998754243 34555443446656789999999999
No 287
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.37 E-value=0.42 Score=52.55 Aligned_cols=45 Identities=13% Similarity=0.217 Sum_probs=29.6
Q ss_pred HHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 130 LYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 130 L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.+.+++.||+++.++.+. .+. ..| .+ .+ ..+.++.+|||||...
T Consensus 102 ~~~~~~~~gv~~~~g~~~~---~~~-~~v---~v---~~---~~~~~d~lviATGs~p 146 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV---LDG-KQV---EV---DG---QRIQCEHLLLATGSSS 146 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE---EET-TEE---EE---TT---EEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEEEEEEE---ccC-CEE---EE---ee---EEEEeCEEEEeCCCCC
Confidence 3455567899999887654 232 221 11 22 3689999999999854
No 288
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=85.31 E-value=1.3 Score=48.23 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeee--cCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLIS--DSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~--~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
+..+...+.+.+++.||+++.++.+.++.. ++ +++.++.. .+|+ .+.++.||+|+|-.
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~---~~G~--~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLC---EDGT--RLPADLVIAGIGLI 249 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEE---TTSC--EEECSEEEECCCEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEe---CCCC--EEEcCEEEECCCCC
Confidence 346677788888889999999999999987 44 77777665 5664 58899999999943
No 289
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=85.26 E-value=1.4 Score=50.31 Aligned_cols=56 Identities=16% Similarity=0.124 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCC-CCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSE-GDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~-g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
..|.++|.+.+++.|++|+.++.|.+|+.+++ |+++|+.. .+|+ .|+|+.||.+..
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~---~~Ge--~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVID---QFGQ--RIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEE---TTSC--EEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEe---CCCC--EEEcCEEEEChh
Confidence 47889999999999999999999999998754 78999873 5675 578999998443
No 290
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=85.05 E-value=2.1 Score=47.33 Aligned_cols=55 Identities=20% Similarity=0.169 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+...+.+.+++.||+|+.++.+.++..++ +++ .+.. .+|+ .+.++.||+|+|-
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~---~~g~--~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTE-NCY-NVVL---TNGQ--TICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECS-SSE-EEEE---TTSC--EEEESEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CEE-EEEE---CCCc--EEEcCEEEEeeCC
Confidence 4677788888888999999999999998875 554 3433 5664 5889999999993
No 291
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=84.68 E-value=3 Score=45.47 Aligned_cols=64 Identities=11% Similarity=-0.040 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCc-EEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGN-IMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~-~~~i~AkaVVlATGG~~~ 188 (786)
...+.+.|.+.+++.++.+++++.|+++..++ +.+ -+.+.+..+|+ ...+.++.||+|||.++.
T Consensus 114 ~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 114 RHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD-GSW-VVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp HHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-TEE-EEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred HHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-CeE-EEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 34677777777777788899999999998764 432 23333322365 456899999999999764
No 292
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=84.60 E-value=0.83 Score=50.29 Aligned_cols=57 Identities=14% Similarity=-0.016 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.|.+.+++.|++|+++++|++|..++ +.++.+.+ .++ .+.|+.||+|++.+.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~-~~~~~v~~---~~~---~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQA-EGRWKVSL---RDS---SLEADHVISAIPASV 290 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECG-GGCEEEEC---SSC---EEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC-CceEEEEE---CCe---EEEcCEEEECCCHHH
Confidence 3688999999999999999999999998875 44334422 333 588999999998653
No 293
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=84.54 E-value=2.3 Score=46.74 Aligned_cols=63 Identities=8% Similarity=0.081 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.++++..++ +..+.+...+..+++...+.++.||+|+|-..
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKS-DGKIDVSIEAASGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECT-TSCEEEEEEETTSCCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcC-CceEEEEEEecCCCCceEEEcCEEEECcCCCc
Confidence 4556677778888999999999999998765 44233333221123334689999999999543
No 294
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=84.52 E-value=1.4 Score=48.55 Aligned_cols=60 Identities=13% Similarity=0.116 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||++++++.+.++..++++.++.+.. .+|+ ..+.++.||+|+|-..
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~---~~G~-~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHM---NDSK-SIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEE---TTSC-EEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEE---CCCc-EEEEcCEEEECCCCCC
Confidence 3566677777888899999999999998764343444543 5663 3689999999999544
No 295
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=84.46 E-value=1.2 Score=48.86 Aligned_cols=58 Identities=14% Similarity=0.103 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+|+.++.+.++..++ +.++.+.. ..+|+ +.++.||+|+|-..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~--~~~g~---i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADA-DGRRVATT--MKHGE---IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSCEEEEE--SSSCE---EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CCEEEEEE--cCCCe---EEeCEEEEeeCccc
Confidence 4567778888888999999999999998875 43334431 35674 88999999999654
No 296
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=84.36 E-value=2.6 Score=46.60 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+...+.+.+++.||+++.++.+.++..++ +.+ .+...+..+|+...+.++.||+|+|-.
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG-DGA-KVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEEeC-CEE-EEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 3456677777888899999999999998775 433 344444333644578999999999944
No 297
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=84.27 E-value=1.7 Score=48.19 Aligned_cols=58 Identities=17% Similarity=0.114 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+|++++.+.++..++ +..+.+.. .+|+ .+.++.||+|+|-..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~---~~G~--~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNA-DGTRHVVF---ESGA--EADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECT-TSCEEEEE---TTSC--EEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEE---CCCc--EEEcCEEEEccCCCc
Confidence 3556677777888999999999999998764 33334443 5675 588999999999654
No 298
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.26 E-value=1.8 Score=45.48 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+..+...+.+.+++.|++++.++.|+++..++ +.+. +.. .++ .+.++.||+|||.++.
T Consensus 86 ~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~~~-v~~---~~g---~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 86 SGETYAEYLQVVANHYELNIFENTVVTNISADD-AYYT-IAT---TTE---TYHADYIFVATGDYNF 144 (369)
T ss_dssp BHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSEE-EEE---SSC---CEEEEEEEECCCSTTS
T ss_pred CHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC-CeEE-EEe---CCC---EEEeCEEEECCCCCCc
Confidence 345677777778888899999999999998775 4321 221 445 3789999999998763
No 299
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=84.04 E-value=0.37 Score=35.18 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=15.1
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (55)
T 2fdn_A 6 EACISCGACEPECPVNA 22 (55)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred ccCcChhhHHHHCCccc
Confidence 46999999999999874
No 300
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=83.84 E-value=0.76 Score=55.58 Aligned_cols=53 Identities=13% Similarity=0.105 Sum_probs=39.3
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
.|+|.+|+..+..-+. |++||+||+||++ +.. .+..|+..|++||.+++.++.
T Consensus 392 ~g~i~vd~~~~~~v~~----ts~p~IyAaGD~a--~~~--------~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 392 QGKLDWDTTIHAFVPA----DAVANQHLAGAMT--GRL--------DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp TCCEEEETTTTEEEEC----SCCTTEEECGGGG--TCC--------SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEcCcccccccC----CCCCCEEEEEecC--Cch--------hHHHHHHHHHHHHHHHHHHcC
Confidence 4678888876522111 7899999999998 332 245788889999999998774
No 301
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=83.50 E-value=0.39 Score=38.60 Aligned_cols=17 Identities=29% Similarity=0.647 Sum_probs=15.1
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (82)
T 2fgo_A 6 DDCINCDVCEPECPNGA 22 (82)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred CCCCChhhHHHHCChhc
Confidence 56999999999999874
No 302
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=83.24 E-value=2 Score=47.56 Aligned_cols=57 Identities=11% Similarity=0.119 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 125 ALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 125 ~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+...+.+.+++.||+|++++.+.++..++ +..+.+.. .+|+ .+.++.||+|+|-..
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~---~~G~--~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSKHVTF---ESGK--TLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCEEEEE---TTSC--EEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceEEEEE---CCCc--EEEcCEEEECCCCcc
Confidence 445566677778899999999999998764 33344443 4675 589999999999543
No 303
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=83.23 E-value=0.4 Score=38.53 Aligned_cols=17 Identities=29% Similarity=0.661 Sum_probs=15.3
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (82)
T 3eun_A 6 DECINCDVCEPECPNGA 22 (82)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred CCCcCccchHHHCChhh
Confidence 56999999999999875
No 304
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=83.18 E-value=1.9 Score=47.69 Aligned_cols=58 Identities=9% Similarity=0.098 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhcCC-ceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAK-TNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~G-v~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
-..+.+.|.+.+.+.| ++|+++++|++|..++ +.|. +.. .+|+ .++|+.||+|+|-..
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-~~v~-v~~---~~g~--~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-DAAR-VTA---RDGR--EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-SSEE-EEE---TTCC--EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-CEEE-EEE---CCCC--EEEcCEEEECCCHHH
Confidence 3578899999998888 9999999999998875 5432 322 4564 588999999999543
No 305
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=82.96 E-value=0.2 Score=50.59 Aligned_cols=15 Identities=20% Similarity=0.654 Sum_probs=13.7
Q ss_pred ccccccccchhhCCC
Q psy9575 752 FRCRSIMNCVDTCPK 766 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~ 766 (786)
..|+.||.|..+||.
T Consensus 201 ~~C~~C~~C~~vCp~ 215 (265)
T 2pa8_D 201 LSCTLCEECLRYCNG 215 (265)
T ss_dssp GGCCCCCHHHHHHTT
T ss_pred ccCCCchHHHHhCCC
Confidence 579999999999994
No 306
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=82.95 E-value=0.74 Score=45.62 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=31.4
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
++.+|||+|||++. |.++..|+.+|+.||+.++++++..
T Consensus 292 ~~~~~v~l~GDa~~----------g~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 292 DADLGIYVCGDWCL----------SGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp ETTTTEEECCGGGT----------TSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred eCCCCEEEEecccC----------CcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 67899999999762 2247779999999999999998653
No 307
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=82.76 E-value=0.36 Score=38.41 Aligned_cols=17 Identities=29% Similarity=0.786 Sum_probs=15.1
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.++
T Consensus 8 ~~C~~Cg~C~~~CP~~a 24 (80)
T 1jb0_C 8 DTCIGCTQCVRACPTDV 24 (80)
T ss_dssp TTCCCCCHHHHHCTTCC
T ss_pred CcCcChhHHHHHCCccc
Confidence 56999999999999874
No 308
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=82.65 E-value=0.39 Score=38.34 Aligned_cols=17 Identities=29% Similarity=0.757 Sum_probs=15.2
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (80)
T 1rgv_A 6 DDCTACDACVEECPNEA 22 (80)
T ss_dssp SCCCCCCTTTTTCTTCC
T ss_pred CCCcChhhHHHHcChhc
Confidence 57999999999999864
No 309
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=82.60 E-value=0.31 Score=36.06 Aligned_cols=18 Identities=28% Similarity=0.720 Sum_probs=15.7
Q ss_pred ccccccccchhhCCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGLN 769 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi~ 769 (786)
..|+.||.|+.+||..+.
T Consensus 6 ~~C~~C~~C~~~CP~~~~ 23 (58)
T 1f2g_A 6 DDCMACEACVEICPDVFE 23 (58)
T ss_dssp TTCCCCCHHHHHCTTTEE
T ss_pred CcCccchHHHHhCCccEE
Confidence 569999999999998654
No 310
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=82.59 E-value=1.6 Score=47.79 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++.||+++.++.+.++..++ +++.++.. +|+ .+.++.||+|+|-..
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~----~g~--~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTL----DGK--EIKSDIAILCIGFRP 247 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEET----TSC--EEEESEEEECCCEEE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEe----CCC--EEECCEEEECcCCCC
Confidence 34667788888889999999999999998654 66655432 453 588999999999543
No 311
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=82.57 E-value=1.3 Score=47.78 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+|+.++.+.++..+ +++.++.. .+|+ .+.|+.||+|+|-..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~---~dg~--~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMA---SDGR--SFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEE---TTSC--EEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEE---CCCC--EEEcCEEEEeeCCee
Confidence 456677778888889999999999998764 45666655 5675 588999999999543
No 312
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=82.39 E-value=3.9 Score=45.32 Aligned_cols=66 Identities=15% Similarity=0.176 Sum_probs=50.0
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCC------CEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEG------DILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g------~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..++..-|...+++.+..+.++++|+++..++++ ...-|.+.+..+|+...+.|+.||+|||+..
T Consensus 143 ~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 143 ARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp BHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred CHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 34577888888888888889999999999864322 2344556666778888899999999999754
No 313
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=82.24 E-value=0.37 Score=35.72 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=15.7
Q ss_pred ccccccccchhhCCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGLN 769 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi~ 769 (786)
..|+.||.|+.+||..+.
T Consensus 8 ~~C~~C~~C~~~Cp~~~~ 25 (60)
T 1rof_A 8 DACIGCGVCENLCPDVFQ 25 (60)
T ss_dssp TTCCSCCSSTTTCTTTBC
T ss_pred hhCCCChHHHHhCcHHHe
Confidence 569999999999998655
No 314
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=82.15 E-value=0.42 Score=38.75 Aligned_cols=17 Identities=24% Similarity=0.585 Sum_probs=15.1
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (85)
T 2zvs_A 6 KKCINCDMCEPECPNEA 22 (85)
T ss_dssp TTCCCCCTTTTTCTTCC
T ss_pred CcCcChhHHHHHCchhc
Confidence 46999999999999874
No 315
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=81.69 E-value=3.2 Score=45.59 Aligned_cols=64 Identities=11% Similarity=-0.018 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcE--EEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNI--MILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~--~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.+.++..++++..+.+...+..+|+. ..+.++.||+|+|-..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 456667778888899999999999999876534233344422122332 5789999999999543
No 316
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=81.56 E-value=1.1 Score=54.33 Aligned_cols=63 Identities=10% Similarity=-0.046 Sum_probs=46.3
Q ss_pred EEEcCCCChhHHHHHHHchhccCCCccc-----c-cCCCCCcccceEEEeC---C----c-ccccccccccccCcceEE
Q psy9575 576 LVNLSSNDKMLLDALHRIKYDIDDSLTL-----R-RSCREGVCGSDAMNIN---G----K-NGLACITNLNELKQPIII 640 (786)
Q Consensus 576 ~v~~~~~~~tiL~al~~~~~~~~~~l~~-----~-~~Cr~g~Cg~C~V~vn---G----~-~~laC~t~v~~~~~~~~i 640 (786)
++++.++ .||++||..+|+. ....+| + ..|..+.|..|.|+|+ | . +.+||.|.+.+|+...+.
T Consensus 31 ~~~~~~g-~tv~~aL~~~Gv~-~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~~~g~~~~~~~~ac~~~~~~gm~~~~~ 107 (965)
T 2gag_A 31 KLSAFRG-DTVASALLANGVR-RAGNSLYLDRPRGIFAAGVEEPNALVTVSARHEQDIDESMLPATTVPVTEDLNATLL 107 (965)
T ss_dssp EEEEEET-CBHHHHHHHTTCC-BCSCCTTTCCCCBCCCSSTTCCSCEEEECCCSTTCCCEEEEEGGGCBCCTTEEEEEC
T ss_pred EEEecCC-CHHHHHHHHcCCe-EeecCCCCCCCcccccCCccCCceEEEEccCCCCCcCCccccceeeecccceEeecc
Confidence 3444556 7999999999875 344453 2 3477899999999999 6 3 345999999998766543
No 317
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.04 E-value=0.83 Score=49.40 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=37.0
Q ss_pred cCcccCCCCcccccCCCCCcccCceeeecccCCccCC----CCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 338 GGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVH----GANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 338 GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~----Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
+||.||+.++ |++||+||+|||+. ..+ | .++.-.....|...|++|+++++.
T Consensus 265 ~gi~vd~~~~---------t~~~~iyA~GD~a~-~~~~~~~g-~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 265 NGVDVDEFCR---------TSLTDVYAIGDCAA-HANDFADG-AVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp SSEECCTTCB---------CSSTTEEECGGGEE-EECGGGTT-CEECCCSHHHHHHHHHHHHHHHTT
T ss_pred CCEEECCCCC---------cCCCCEEEEEeeee-ecCcccCC-cceeechHHHHHHHHHHHHHHhcC
Confidence 5799999888 99999999999983 222 2 122222356677778888888774
No 318
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=80.88 E-value=0.44 Score=36.04 Aligned_cols=15 Identities=27% Similarity=0.620 Sum_probs=13.5
Q ss_pred ccccccccchhhCCC
Q psy9575 752 FRCRSIMNCVDTCPK 766 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~ 766 (786)
..|+.||.|+.+||.
T Consensus 9 ~~C~~Cg~C~~~CP~ 23 (64)
T 1dax_A 9 DECIACESCVEIAPG 23 (64)
T ss_dssp TTCCSCCHHHHHCTT
T ss_pred ccCCCchHHHHhCCc
Confidence 579999999999993
No 319
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=80.73 E-value=0.46 Score=40.00 Aligned_cols=17 Identities=24% Similarity=0.669 Sum_probs=15.1
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.++
T Consensus 43 ~~C~~Cg~C~~~CP~~a 59 (103)
T 1xer_A 43 DLCIADGSCINACPVNV 59 (103)
T ss_dssp TTCCCCCHHHHHCTTCC
T ss_pred hhCCChhhHHHHcCccC
Confidence 46999999999999764
No 320
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.33 E-value=3.6 Score=45.08 Aligned_cols=62 Identities=8% Similarity=0.162 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+|+.++.+.++..++ +.+ .+...+..+|+...+.++.||+|+|-..
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG-DGV-KLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSS-SSE-EEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC-CeE-EEEEEecCCCcceEEECCEEEECCCCCc
Confidence 4566677788888999999999999998764 443 3333221245434689999999999554
No 321
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=80.23 E-value=5.2 Score=43.63 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=37.1
Q ss_pred CCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 137 AKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 137 ~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
.||+++.++.|+++..++ +. +.+...+..+|+...+.++.||+|||-
T Consensus 329 ~~v~i~~~~~v~~v~~~~-~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA-QG-IELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp CCSEEETTEEEEEEEEET-TE-EEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred CCeEEEeCCEEEEEEecC-CE-EEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 599999999999998764 43 445555545787778999999999993
No 322
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=80.17 E-value=1.9 Score=35.84 Aligned_cols=59 Identities=15% Similarity=0.055 Sum_probs=39.8
Q ss_pred eEEEEcCCCChhHHHHHHHchhcc-CCCcccccCCCCCcccceEEEeCCcccccccccccccCcceEECCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDI-DDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~-~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
.+.++++++ +||.+++...|+.. .|.+... . +.|.|||+.+. -.|.+++|..+-...|+
T Consensus 27 ~~~~~v~~g-~TV~daI~~~gi~~~~peIdl~----~-----~~V~Vng~~v~-~d~~L~dGDRVEIyrpl 86 (97)
T 2hj1_A 27 LKSFQVDEG-ITVQTAITQSGILSQFPEIDLS----T-----NKIGIFSRPIK-LTDVLKEGDRIEIYRPL 86 (97)
T ss_dssp EEEEEEETT-CBHHHHHHHHTHHHHCTTCCTT----T-----SEEEEEECSCC-TTCBCCTTCEEEECCCC
T ss_pred EEEEEcCCC-CcHHHHHHHcCCCccCCccccc----c-----cEEEEcCEECC-CCccCCCCCEEEEEecc
Confidence 345556666 89999999999842 3333322 2 68999998654 77788887655555555
No 323
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=80.09 E-value=0.24 Score=53.31 Aligned_cols=19 Identities=32% Similarity=0.763 Sum_probs=16.1
Q ss_pred cccccccccchhhCCCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKGLN 769 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~gi~ 769 (786)
...|+.||.|+.+||..+.
T Consensus 300 ~~~C~~Cg~Ci~~CP~al~ 318 (437)
T 3or1_A 300 NKNCTRCMHCINTMPRALK 318 (437)
T ss_dssp GGGCCCCSHHHHHCTTTEE
T ss_pred cccCCchhhhHhhCcHhhc
Confidence 3579999999999998653
No 324
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=79.76 E-value=3.9 Score=44.88 Aligned_cols=60 Identities=8% Similarity=-0.010 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.+.++..++ +.+. +...+ .+| ...+.++.||+|+|-..
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~-~~~~-v~~~~-~~g-~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKN-KQVT-VKFVD-AEG-EKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECS-SCEE-EEEES-SSE-EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcC-CEEE-EEEEe-CCC-cEEEECCEEEEeeCCcc
Confidence 3456677777888899999999999998775 5543 33322 233 34689999999999543
No 325
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=79.49 E-value=2.7 Score=45.91 Aligned_cols=58 Identities=14% Similarity=0.100 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||++++++.+.++..++ +..+.+.. .+|+ .+.++.||+|+|-.+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~---~~g~--~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNT-DGSLTLEL---EDGR--SETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECT-TSCEEEEE---TTSC--EEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CcEEEEEE---CCCc--EEEcCEEEECCCCCc
Confidence 4566777888888899999999999998764 33233433 5675 588999999999544
No 326
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=78.82 E-value=0.55 Score=37.57 Aligned_cols=16 Identities=19% Similarity=0.289 Sum_probs=14.1
Q ss_pred ccccccccchhhCCCC
Q psy9575 752 FRCRSIMNCVDTCPKG 767 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~g 767 (786)
..|+.||.|+.+||..
T Consensus 9 ~~CigCg~C~~~CP~~ 24 (81)
T 1iqz_A 9 ETCIACGACGAAAPDI 24 (81)
T ss_dssp TTCCCCSHHHHHCTTT
T ss_pred ccCcccChhhHhCchh
Confidence 5799999999999943
No 327
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=78.79 E-value=4.8 Score=44.04 Aligned_cols=61 Identities=8% Similarity=0.125 Sum_probs=42.2
Q ss_pred HHHHHHHHHHH-hcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRN-LHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~-~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+ ++.||+|+.++.+.++..++ +.+ .+...+ .+|+...+.++.||+|+|-..
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~-~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNG-DSV-SLEVEG-KNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECS-SSE-EEEEEC-C---EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC-CeE-EEEEEc-CCCceEEEECCEEEECCCccc
Confidence 34556777778 88999999999999998765 443 333321 245445789999999999544
No 328
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=78.68 E-value=0.6 Score=39.65 Aligned_cols=19 Identities=37% Similarity=0.781 Sum_probs=16.4
Q ss_pred hhhCcccCcccCCCCCccc
Q psy9575 694 LYECILCGCCSTACPSFWW 712 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~ 712 (786)
...|+.||.|+.+||....
T Consensus 36 ~~~C~~Cg~C~~~CP~~ai 54 (106)
T 7fd1_A 36 PDECIDCALCEPECPAQAI 54 (106)
T ss_dssp TTTCCCCCTTGGGCTTCCE
T ss_pred cccCCChhhhHHhCCChhh
Confidence 5689999999999998643
No 329
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=78.62 E-value=4.4 Score=42.98 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
...+...+.+.+++.||+|+.++.+.++..++ +. +.+.. .+|+ .+.++.||+|+|-.
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~---~~g~--~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EG-LEAHL---SDGE--VIPCDLVVSAVGLR 242 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET-TE-EEEEE---TTSC--EEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CE-EEEEE---CCCC--EEECCEEEECcCCC
Confidence 34667788888888999999999999998764 42 33333 4664 58899999999944
No 330
>3i9v_1 NADH-quinone oxidoreductase subunit 1; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_1* 2fug_1* 3iam_1* 3ias_1* 3m9s_1*
Probab=78.09 E-value=0.45 Score=51.14 Aligned_cols=72 Identities=15% Similarity=0.210 Sum_probs=48.4
Q ss_pred hhhCcccCcccCCCCCcccCCCCCCCHHHHHHHHHHhhcCcch-hhHHHhhhccCCCccccccc-cccchhhCCCCCChH
Q psy9575 694 LYECILCGCCSTACPSFWWNSDRFVGPAGLLQAYRFISDSRDE-ATNFRLDNLEDPYRLFRCRS-IMNCVDTCPKGLNPN 771 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~~~~~~~gp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~C~~-Cg~C~~vCP~gi~~~ 771 (786)
...|.+|+.|...||.. +..+...+..+... .+-+.+.. +..|+. |+.|...|+...++.
T Consensus 350 ~ESCgqCtpCr~Gt~~~------------l~~lL~ri~~G~g~~~dld~L~~------l~~~i~~~s~C~lg~~A~~Pv~ 411 (438)
T 3i9v_1 350 HESCGKCTPCREGVAGF------------MVNLFAKIGTGQGEEKDVENLEA------LLPLIEGRSFCPLADAAVWPVK 411 (438)
T ss_dssp HHCCSCCHHHHTTTTTH------------HHHHHHHHTTTCCCHHHHHHHHH------HHHHHTTCCSSTHHHHHHHHHH
T ss_pred hhhCCCCccchhhHHHH------------HHHHHHHHHhCCCCHHHHHHHHH------HHHHHccCCCCcCcHhHHHHHH
Confidence 67999999999999821 22333333333221 11112222 345665 999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy9575 772 RSINKIKELMIY 783 (786)
Q Consensus 772 ~~i~~lr~~~~~ 783 (786)
+.|...|.+...
T Consensus 412 s~l~~Fr~E~ea 423 (438)
T 3i9v_1 412 GSLRHFKDQYLA 423 (438)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 331
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=78.09 E-value=4.2 Score=44.50 Aligned_cols=62 Identities=11% Similarity=-0.036 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.++++..++ +.+ .+...+..+|+...+.++.||+|+|-.+
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCccc
Confidence 3556677778888999999999999998764 432 3333211116545689999999999543
No 332
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=77.88 E-value=3.8 Score=45.33 Aligned_cols=56 Identities=13% Similarity=0.108 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 125 ALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 125 ~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+...+.+.+++.||+|+.++.+.++..++ +++ .+. . .+|+ .+.++.||+|+|-..
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~--~-~~g~--~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTG-AGV-LVT--M-TDGR--TVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECS-SSE-EEE--E-TTSC--EEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEE--E-CCCc--EEEcCEEEECCCCCc
Confidence 456777788888999999999999998765 543 222 2 4554 588999999999654
No 333
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=77.73 E-value=0.78 Score=43.15 Aligned_cols=18 Identities=28% Similarity=0.597 Sum_probs=15.8
Q ss_pred cccccccccchhhCCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~gi 768 (786)
...|+.||.|+.+||.+.
T Consensus 50 ~~~Ci~C~~C~~~CP~~a 67 (182)
T 3i9v_9 50 LEKCIGCSLCAAACPAYA 67 (182)
T ss_dssp CBSCCCCCHHHHHCTTCC
T ss_pred CccCcccccchhhCCccc
Confidence 467999999999999874
No 334
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=77.67 E-value=1.3 Score=49.11 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=27.8
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
|+|||||.||+-+ | .|.++..++.+|++|++.+.+.+.+.
T Consensus 455 t~i~gLyl~G~~t----~-----pG~Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 455 KTITNLYLVGAGT----H-----PGAGIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp -CCTTEEECCCH---------------HHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCEEEECCCC----C-----CcccHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999999855 2 23457778899999999999887654
No 335
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=77.66 E-value=3.6 Score=45.52 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+...+.+.+++.||+++.++.++++..++ +.+ ++.. .+|+ .+.|+.||+|+|-
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~~-~v~l---~dG~--~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GKL-LIKL---KDGR--KVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TEE-EEEE---TTSC--EEEESEEEECCCE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-CeE-EEEE---CCCC--EEECCEEEECCCC
Confidence 4566778888888999999999999997664 443 4433 5674 5889999999993
No 336
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=77.50 E-value=8.8 Score=42.27 Aligned_cols=60 Identities=13% Similarity=0.093 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++. |+|+.++.+.++..++ +.+. +...+ .+|+...+.++.||+|+|-..
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~-~~v~-v~~~~-~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKE-DAVE-VIYFD-KSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECS-SSEE-EEEEC-TTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcC-CEEE-EEEEe-CCCceEEEECCEEEEeeCCcc
Confidence 46777788888777 9999999999998875 5554 33222 367556789999999999544
No 337
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=77.28 E-value=4.2 Score=45.02 Aligned_cols=59 Identities=14% Similarity=0.146 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.+.++..++++. +.+.. .+|+. .+.++.||+|+|-..
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~---~~g~~-~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHL---SDGRI-YEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEE---TTSCE-EEEESEEEECCCBCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEE---CCCcE-EEECCEEEECCCCCc
Confidence 4566777888888999999999999998764232 33333 46753 389999999999654
No 338
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=77.24 E-value=3.9 Score=44.76 Aligned_cols=58 Identities=21% Similarity=0.164 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.+.++..++ +. ..+.. .+|+. .+.++.||+|+|-..
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~---~~G~~-~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDA-QG-TTLVA---QDGTR-LEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEET-TE-EEEEE---TTCCE-EEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-Ce-EEEEE---eCCcE-EEEcCEEEECCCCCc
Confidence 4566677788888999999999999998764 33 23332 56753 588999999999654
No 339
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=77.11 E-value=0.73 Score=33.89 Aligned_cols=18 Identities=28% Similarity=0.719 Sum_probs=15.0
Q ss_pred ccccccccchhhCCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGLN 769 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi~ 769 (786)
..|+.||.|+.+||..+.
T Consensus 7 ~~C~~C~~C~~~Cp~~~~ 24 (59)
T 1dwl_A 7 EECIGCESCVELCPEVFA 24 (59)
T ss_dssp CCCSSCCGGGGTSTTTEE
T ss_pred hhCcChhHHHHHCCHHhe
Confidence 569999999999996443
No 340
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=77.04 E-value=0.72 Score=39.02 Aligned_cols=18 Identities=39% Similarity=0.929 Sum_probs=16.0
Q ss_pred hhhCcccCcccCCCCCcc
Q psy9575 694 LYECILCGCCSTACPSFW 711 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~ 711 (786)
..+|+.||.|+.+||...
T Consensus 36 ~~~C~~Cg~C~~~CP~~A 53 (105)
T 2v2k_A 36 PDECVDCGACEPVCPVEA 53 (105)
T ss_dssp TTTCCCCCCSGGGCTTCC
T ss_pred CCcCcchhhHHHhCCccC
Confidence 579999999999999853
No 341
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=76.98 E-value=0.87 Score=45.08 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=22.5
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~ 26 (786)
|+||+.|+++|.+|+|+||....+|.
T Consensus 15 L~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 58999999999999999998766543
No 342
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=76.44 E-value=5 Score=43.89 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=38.8
Q ss_pred CCceEEeceEEEeeeecCCC-CEEEEEEEEcC------------CCcEEEEEeCeEEEcCCCCC
Q psy9575 137 AKTNFFIEWMAIDLISDSEG-DILGVVALEME------------TGNIMILESKITILATGGGG 187 (786)
Q Consensus 137 ~Gv~i~~~~~v~~L~~~~~g-~v~G~~~~~~~------------~g~~~~i~AkaVVlATGG~~ 187 (786)
.||+|++++.++++..++++ +|.++.+.+.. +|+...+.++.||+|+|-.+
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 79999999999999865335 78887664311 45556899999999999544
No 343
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=76.04 E-value=6.2 Score=43.10 Aligned_cols=58 Identities=9% Similarity=0.070 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+...+.+.+++.||+++.++.+.++..++ +.+ .+.. . .+|+...+.++.||+|+|-
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~-~-~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGG-SQV-TVTV-T-KDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECS-SCE-EEEE-E-SSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC-CeE-EEEE-E-cCCceEEEEcCEEEECCCC
Confidence 3455667777788899999999999998764 443 2222 1 2565557899999999993
No 344
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=75.96 E-value=4.3 Score=47.03 Aligned_cols=53 Identities=9% Similarity=0.097 Sum_probs=39.3
Q ss_pred HHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 127 LHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 127 ~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
...+.+.+++.||+|++++.++++..++ +.+....+++...+.|+.||+|+|-
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~------~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGAGG------VTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEETTE------EEEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEECCe------EEEEEccCCeEEEEECCEEEECCCC
Confidence 4566777888999999999999986442 2233333555567899999999993
No 345
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=75.28 E-value=7.4 Score=42.32 Aligned_cols=58 Identities=9% Similarity=0.128 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+...+.+.+++.||+++.++.+.++..++ +.+ .+... .+|+...+.++.||+|+|-
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~--~~g~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEERE-DGV-TVTYE--ANGETKTIDADYVLVTVGR 268 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEE-EEEEE--ETTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CeE-EEEEE--eCCceeEEEcCEEEECcCC
Confidence 3556677778888999999999999998764 432 23322 2344457899999999994
No 346
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=75.07 E-value=4.4 Score=44.60 Aligned_cols=55 Identities=5% Similarity=0.129 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+...+.+.+++.||+++.++.++++..+ +++.++.. . +. .+.++.||+|+|-.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~---~-~~--~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVET---D-KG--TYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEE---T-TE--EEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEE---C-CC--EEEcCEEEECcCCC
Confidence 466778888888899999999999998764 55655543 2 32 58999999999943
No 347
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=74.96 E-value=3.4 Score=42.84 Aligned_cols=49 Identities=18% Similarity=0.243 Sum_probs=37.2
Q ss_pred hcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 135 LHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 135 ~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
++.||+++.++.+.++..+ +++.++...+..+|+...+.++.||+|+|-
T Consensus 202 ~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGD--TTVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp HCTTEEEECSEEEEEEECS--SSCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred ccCCcEEEeCceeEEEecC--CcEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 4579999999999999765 355666665433565457899999999993
No 348
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=73.30 E-value=3.9 Score=44.84 Aligned_cols=56 Identities=13% Similarity=0.235 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhcC--------CceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHA--------KTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~--------Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+++.|.+.+.+. |++|+.+++|++|..++ +.|. +.+ .+|+ .++|+.||+|++..
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~-~~v~-v~~---~~g~--~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP-GGVT-VKT---EDNS--VYSADYVMVSASLG 269 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS-SCEE-EEE---TTSC--EEEESEEEECSCHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC-CcEE-EEE---CCCC--EEEcCEEEEecCHH
Confidence 36778888777654 78999999999999876 6554 333 5664 57899999999854
No 349
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=73.09 E-value=5.4 Score=43.61 Aligned_cols=56 Identities=13% Similarity=0.028 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+|++++.+.++..++ + ...+.. . +. .+.++.||+|+|-..
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~-~~~v~~---~-~~--~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-G-EFVLTT---T-HG--ELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEET-T-EEEEEE---T-TE--EEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-C-EEEEEE---C-Cc--EEEcCEEEECCCCCc
Confidence 4567788888888999999999999998764 3 333332 2 32 589999999999755
No 350
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=72.41 E-value=4.7 Score=44.44 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+...+.+.+++.||+|+.++.++++..+ +++.++.. +|+ .+.++.||+|+|-
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~v~~v~~----~g~--~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAGN--GKVEKIIT----DKN--EYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEECS--SSCCEEEE----SSC--EEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEcC--CcEEEEEE----CCc--EEECCEEEECCCC
Confidence 456667778888899999999999998753 55555543 343 5889999999994
No 351
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=72.38 E-value=12 Score=41.50 Aligned_cols=61 Identities=20% Similarity=0.247 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCC--CEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEG--DILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g--~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
..+...+.+.+++.||+|+.++.+.++...+++ ..+-+...+...++...+.++.||+|+|
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecC
Confidence 467777888888899999999988888654311 2223333332233445678999999999
No 352
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=71.63 E-value=1.6 Score=44.19 Aligned_cols=19 Identities=26% Similarity=0.669 Sum_probs=16.3
Q ss_pred ccccccccccchhhCCCCC
Q psy9575 750 RLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 750 ~~~~C~~Cg~C~~vCP~gi 768 (786)
.++.|+.||.|..+||+-.
T Consensus 178 ~~~~CI~CG~C~~aCP~~~ 196 (282)
T 3vr8_B 178 GLYECILCACCSASCPSYW 196 (282)
T ss_pred hhhhCcccCcCcccCCcee
Confidence 4578999999999999763
No 353
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=70.90 E-value=1.1 Score=33.85 Aligned_cols=17 Identities=24% Similarity=0.522 Sum_probs=14.7
Q ss_pred ccccccccchhhCCCCC
Q psy9575 752 FRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~Cg~C~~vCP~gi 768 (786)
..|+.||.|+.+||.-+
T Consensus 9 ~~C~~C~~C~~~Cp~~~ 25 (66)
T 1sj1_A 9 DTCIGDAICASLCPDVF 25 (66)
T ss_dssp TTCCCCCHHHHHCTTTE
T ss_pred ccCcCchHHHHhCCceE
Confidence 56999999999999644
No 354
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=70.88 E-value=0.82 Score=41.66 Aligned_cols=18 Identities=28% Similarity=0.515 Sum_probs=16.0
Q ss_pred hhhCcccCcccCCCCCcc
Q psy9575 694 LYECILCGCCSTACPSFW 711 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~ 711 (786)
..+|+.||.|+.+||...
T Consensus 44 ~~~C~~Cg~Cv~~CP~~A 61 (150)
T 1jnr_B 44 PDMCWECYSCVKMCPQGA 61 (150)
T ss_dssp GGGCCCCCHHHHHCTTCC
T ss_pred cccCcCHhHHHHhCCccc
Confidence 579999999999999863
No 355
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=70.72 E-value=5.4 Score=43.30 Aligned_cols=57 Identities=14% Similarity=0.140 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++.||+++.++.+.++..+ +++.++.. +++ .+.++.||+|+|-..
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~----~~~--~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT----DKN--AYDADLVVVAVGVRP 246 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE----SSC--EEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE----CCC--EEECCEEEECcCCCC
Confidence 3466778888888899999999999998754 44444433 233 588999999999543
No 356
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=70.31 E-value=7.1 Score=42.48 Aligned_cols=58 Identities=12% Similarity=0.082 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
..+.+.|.+.+++.||+++.++.++++..++ +.+ .+.. .+|+ .+.++.||+|||..++
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~---~~g~--~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEA-KGA-RVEL---EGGE--VLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TEE-EEEE---TTSC--EEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CEE-EEEE---CCCe--EEEcCEEEECcCCCcC
Confidence 4566777788888899999999999998764 432 2222 3554 5889999999997653
No 357
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=69.32 E-value=7.5 Score=41.64 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.+.++. + + ++.. .+|+ .+.++.||+|+|-..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~---~~g~--~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLL---DDGT--RIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEE---TTSC--EEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEE---CCCC--EEEcCEEEECcCCCc
Confidence 4667788888888999999999999987 3 4 3433 4664 588999999999543
No 358
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=68.63 E-value=3.4 Score=43.36 Aligned_cols=21 Identities=29% Similarity=0.404 Sum_probs=19.2
Q ss_pred ChHhhhcHhCCC-CEEEEEecC
Q psy9575 1 MRASLQLAQEGL-NVAILSKVF 21 (786)
Q Consensus 1 L~AA~~aa~~G~-~V~vvek~~ 21 (786)
|+||+.|++.|. +|+|+||..
T Consensus 17 l~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 17 IGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp HHHHHHHHHTTCCCEEEECSSS
T ss_pred HHHHHHHHHcCCCcEEEEecCC
Confidence 478999999999 999999987
No 359
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=68.22 E-value=1 Score=41.79 Aligned_cols=18 Identities=28% Similarity=0.538 Sum_probs=16.1
Q ss_pred hhhCcccCcccCCCCCcc
Q psy9575 694 LYECILCGCCSTACPSFW 711 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~ 711 (786)
..+|+.||.|+.+||...
T Consensus 43 ~~~C~~Cg~Cv~~CP~~A 60 (166)
T 3gyx_B 43 PEACWECYSCIKICPQGA 60 (166)
T ss_dssp GGGCCCCCHHHHHCSSCC
T ss_pred cccCcccChHhHhCCccc
Confidence 579999999999999864
No 360
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=68.13 E-value=1.6 Score=34.48 Aligned_cols=17 Identities=29% Similarity=0.657 Sum_probs=14.9
Q ss_pred ccccc--cccchhhCCCCC
Q psy9575 752 FRCRS--IMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~--Cg~C~~vCP~gi 768 (786)
..|+. ||.|+.+||.+.
T Consensus 6 ~~C~~c~C~~C~~~CP~~a 24 (78)
T 1h98_A 6 EPCIGVKDQSCVEVCPVEC 24 (78)
T ss_dssp GGGTTTCCCHHHHHCTTCC
T ss_pred hhCCCCCcChhhhhcCccc
Confidence 56999 999999999863
No 361
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=67.72 E-value=10 Score=41.91 Aligned_cols=59 Identities=14% Similarity=0.066 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcE--EEEEeCeEEEcCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNI--MILESKITILATGGG 186 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~--~~i~AkaVVlATGG~ 186 (786)
...+...+.+.+++.||++++++.++++..+ +.+... ...+|+. ..|.|+.||+|+|-.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~--~~~~~~---~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEK--QLLAKT---KHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECSS--EEEEEE---ECTTSCEEEEEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeCC--ceEEEE---EecCcccceeeeccCEEEEccCCc
Confidence 3567778888888999999999999998533 222221 1245543 468999999999943
No 362
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=67.62 E-value=1.7 Score=34.13 Aligned_cols=17 Identities=29% Similarity=0.681 Sum_probs=14.9
Q ss_pred ccccc--cccchhhCCCCC
Q psy9575 752 FRCRS--IMNCVDTCPKGL 768 (786)
Q Consensus 752 ~~C~~--Cg~C~~vCP~gi 768 (786)
..|+. ||.|+.+||.+.
T Consensus 6 ~~C~~c~C~~C~~~Cp~~a 24 (77)
T 1bc6_A 6 EPCIGTKDASCVEVCPVDC 24 (77)
T ss_dssp STTTTCCCCSSTTTCTTCC
T ss_pred ccCCCCCcchhHHhccccc
Confidence 56999 999999999874
No 363
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=67.38 E-value=17 Score=39.49 Aligned_cols=26 Identities=12% Similarity=0.096 Sum_probs=21.4
Q ss_pred ChHhhhcHh---CCCC---EEEEEecCCCCCh
Q psy9575 1 MRASLQLAQ---EGLN---VAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~---~G~~---V~vvek~~~~~g~ 26 (786)
|+||..|++ .|.+ |+|+||....+|.
T Consensus 15 l~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~ 46 (464)
T 2xve_A 15 MAQLRAFQSAQEKGAEIPELVCFEKQADWGGQ 46 (464)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEECSSSSSCGG
T ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCE
Confidence 478999999 9999 9999998655443
No 364
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=66.92 E-value=1.4 Score=44.71 Aligned_cols=47 Identities=23% Similarity=0.396 Sum_probs=37.8
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
|..||+|++|+++ .-++|..++|. .+..++.+|..||..+.++++..
T Consensus 231 ~~~p~i~a~G~~~-~~~~g~~~~gp-~~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 231 EVVPGMIVTGMEV-AEIDGAPRMGP-TFGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp EEETTEEECTHHH-HHHHTCEECCS-CCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCEEEEeeeh-hhhcCCCCcCh-HHHHHHHhHHHHHHHHHHHhhhh
Confidence 7889999999987 56677767765 46778889999999999987543
No 365
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=65.76 E-value=1.9 Score=43.17 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=22.6
Q ss_pred CcccccCCCCCcccceEEEeC--C-cccccccc
Q psy9575 600 SLTLRRSCREGVCGSDAMNIN--G-KNGLACIT 629 (786)
Q Consensus 600 ~l~~~~~Cr~g~Cg~C~V~vn--G-~~~laC~t 629 (786)
++.-+..|..|+||.|+|.+. | ...+.|.-
T Consensus 219 s~e~~m~CG~G~C~~C~~~~~~~~~~~~~~C~d 251 (262)
T 1ep3_B 219 SMESRMACGIGACYACVEHDKEDESHALKVCED 251 (262)
T ss_dssp ECCCCCSSSSSSSCTTEEEETTEEEEEEETTTT
T ss_pred EecccccCcccccccCCcccccCCCceeEEeCC
Confidence 455568899999999999986 2 23568854
No 366
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=65.43 E-value=8.8 Score=43.34 Aligned_cols=54 Identities=15% Similarity=0.155 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+...+.+.+++.||+|+.++.+.++..++ + ++.. .+|+ .+.++.||+|+|-.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~---~~g~--~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRL---KSGS--VIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEE---TTSC--EEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEE---CCCC--EEEcCEEEEccCCC
Confidence 4667788888888999999999999997664 3 3333 4564 58899999999943
No 367
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=65.41 E-value=7.7 Score=42.35 Aligned_cols=57 Identities=14% Similarity=0.102 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.|.+.+ |++|+.+++|++|..++ ++ +++...+..+|+ .++|+.||+|++...
T Consensus 238 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~-~~v~~~~~~~g~--~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 238 QVLIDALAASL---GDAAHVGARVEGLARED-GG-WRLIIEEHGRRA--ELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHHHHHHHH---GGGEESSEEEEEEECC---C-CEEEEEETTEEE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHh---hhhEEcCCEEEEEEecC-Ce-EEEEEeecCCCc--eEEcCEEEECCCHHH
Confidence 45777777665 67999999999998875 44 344432112343 589999999998653
No 368
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=64.65 E-value=2.8 Score=49.11 Aligned_cols=26 Identities=15% Similarity=0.522 Sum_probs=21.7
Q ss_pred cccccccccchhhCCCCCChHHHHHH
Q psy9575 751 LFRCRSIMNCVDTCPKGLNPNRSINK 776 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~gi~~~~~i~~ 776 (786)
...|+.||.|..+||+++.+.+++..
T Consensus 414 ~~~Ci~CG~C~~~CP~~~~~~~il~~ 439 (807)
T 3cf4_A 414 VAKCADCGACLLACPEEIDIPEAMGF 439 (807)
T ss_dssp HHHCCCCCHHHHHCTTCCCHHHHHHH
T ss_pred HHhCCCCCchhhhCCCCCchHHHHHH
Confidence 46799999999999999987776543
No 369
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=63.92 E-value=9.3 Score=42.32 Aligned_cols=54 Identities=15% Similarity=0.050 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.|.+.+ |++|+.+++|++|..++ ++|. +.. .+|+ .+.||.||+|++-..
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~v~-v~~---~~g~--~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 215 GQVSERIMDLL---GDRVKLERPVIYIDQTR-ENVL-VET---LNHE--MYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHHH---GGGEESSCCEEEEECSS-SSEE-EEE---TTSC--EEEESEEEECSCGGG
T ss_pred HHHHHHHHHHc---CCcEEcCCeeEEEEECC-CeEE-EEE---CCCe--EEEeCEEEECCCHHH
Confidence 45666776554 78999999999998876 6655 332 5664 578999999999654
No 370
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=63.69 E-value=2.1 Score=46.22 Aligned_cols=19 Identities=42% Similarity=0.880 Sum_probs=16.6
Q ss_pred hhhCcccCcccCCCCCccc
Q psy9575 694 LYECILCGCCSTACPSFWW 712 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~ 712 (786)
..+|+.||.|+.+||....
T Consensus 63 ~~~C~~Cg~C~~~CP~~Ai 81 (421)
T 1hfe_L 63 IEACINCGQCLTHCPENAI 81 (421)
T ss_dssp GGGCCCCCTTGGGCTTCCE
T ss_pred hhhCCchhhHHHhhCcCCc
Confidence 5799999999999998643
No 371
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=63.56 E-value=9.4 Score=42.08 Aligned_cols=62 Identities=18% Similarity=0.257 Sum_probs=44.1
Q ss_pred cHHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 122 TGHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 122 ~g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
.+..+...+.+.+ +.|++++.++.++++..++ +.+.-... .+++...+.++.+|||||....
T Consensus 159 ~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~-~~~~~~~~---~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 159 DSRKVVEELVGKL-NENTKIYLETSALGVFDKG-EYFLVPVV---RGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp EHHHHHHHHHHTC-CTTEEEETTEEECCCEECS-SSEEEEEE---ETTEEEEEEESCEEECCCEEEC
T ss_pred CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCC-cEEEEEEe---cCCeEEEEECCEEEECCCCCcc
Confidence 4556666666666 6799999999999998775 44432211 3465567899999999998653
No 372
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=62.39 E-value=9.2 Score=41.68 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=42.3
Q ss_pred HHHHHHHHhc------CCceEEeceEEEeeeecCCCCEEEEEEEEc-------------CCCcEEEEEeCeEEEcCCCCC
Q psy9575 127 LHTLYQRNLH------AKTNFFIEWMAIDLISDSEGDILGVVALEM-------------ETGNIMILESKITILATGGGG 187 (786)
Q Consensus 127 ~~~L~~~~~~------~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~-------------~~g~~~~i~AkaVVlATGG~~ 187 (786)
.+.|.+.+++ .||+|++++.++++..+ ++|.++.+.+. .+|+...+.++.||+|+|-.+
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 3455555656 69999999999999754 56666655321 246556799999999999544
No 373
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=62.27 E-value=15 Score=41.00 Aligned_cols=56 Identities=14% Similarity=0.184 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeec------------------CCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISD------------------SEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~------------------~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+...+.+.+++.||+++.++.+.++..+ .++++. +.. .+|+ .+.++.||+|+|-
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~---~~g~--~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTL---SNGE--LLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEE---TTSC--EEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEE---cCCC--EEEcCEEEECcCC
Confidence 456677778888899999999999999763 224432 222 4565 6889999999993
No 374
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=61.89 E-value=2.8 Score=45.91 Aligned_cols=52 Identities=17% Similarity=0.234 Sum_probs=36.4
Q ss_pred HHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEc------C---------CCcEEEEEeCeEEEcCCC
Q psy9575 132 QRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEM------E---------TGNIMILESKITILATGG 185 (786)
Q Consensus 132 ~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~------~---------~g~~~~i~AkaVVlATGG 185 (786)
+.+++.||+|++++.++++..+ |+|.|+.+.+. . +|+...+.|+.||+|+|-
T Consensus 310 ~~~~~~Gv~~~~~~~~~~i~~~--g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 310 AHAEEEGVEFIWQAAPEGFTGD--TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHTTCEEECCSSSCCEEEE--EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHCCCEEEeCCCceEEeCC--CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 3456679999999888888743 66666554321 1 344467999999999994
No 375
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=61.82 E-value=11 Score=41.21 Aligned_cols=59 Identities=10% Similarity=0.049 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCC-CcEEEEEeCeEEEcCCCCC
Q psy9575 125 ALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMET-GNIMILESKITILATGGGG 187 (786)
Q Consensus 125 ~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~-g~~~~i~AkaVVlATGG~~ 187 (786)
.+...+.+.+++.||+|+.++.+.++..++ + ...+...+... |+ .+.++.||+|+|-..
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~-~~~v~~~~~~~~g~--~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKE-D-GVYVTFEGANAPKE--PQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEET-T-EEEEEEESSSCCSS--CEEESCEEECCCEEE
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEcC-C-eEEEEEeccCCCce--EEEcCEEEECcCCCc
Confidence 445566677778899999999999998764 3 23343321011 43 467999999999554
No 376
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=61.29 E-value=2.1 Score=42.68 Aligned_cols=19 Identities=26% Similarity=0.674 Sum_probs=16.4
Q ss_pred ccccccccccchhhCCCCC
Q psy9575 750 RLFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 750 ~~~~C~~Cg~C~~vCP~gi 768 (786)
....|+.||.|+.+||+..
T Consensus 154 ~~~~Ci~CG~C~~~CP~~~ 172 (252)
T 2h88_B 154 GLYECILCACCSTSCPSYW 172 (252)
T ss_dssp TTTTCCCCCTTGGGCHHHH
T ss_pred hHHhchhhCcchhhCCCCc
Confidence 4578999999999999864
No 377
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=60.70 E-value=3.1 Score=48.55 Aligned_cols=37 Identities=19% Similarity=0.329 Sum_probs=28.7
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
|++||+||+||+++ . ..+..|+-.|+.|+.++..++.
T Consensus 664 t~~~~VyAiGD~~~--~--------~~~~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 664 NDIKGIYLIGDAEA--P--------RLIADATFTGHRVAREIEEANP 700 (729)
T ss_dssp GTCCEEEECGGGTS--C--------CCHHHHHHHHHHHHHTTTSSCT
T ss_pred cCCCCeEEEeCccc--h--------hhHHHHHHHHHHHHHHhhhhcc
Confidence 89999999999982 1 1255678889999988877654
No 378
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=60.24 E-value=3 Score=43.51 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=36.6
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
..+||||++|=.+ .-++|.+|.|- -++.-+.+|+.|++.|.+.++.
T Consensus 291 ~v~~gl~~~gm~~-~~~~g~~rmgp-~fg~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 291 EIVPGLIVGGMEL-SEIDGANRMGP-TFGAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp EEETTEEECGGGH-HHHHTCEECCS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEcCCEEEechhh-HhhcCCCCCCc-ccceeeecCHHHHHHHHHHHHh
Confidence 5799999999988 58899999873 2445667799999998887754
No 379
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=59.51 E-value=3.5 Score=44.99 Aligned_cols=26 Identities=19% Similarity=0.010 Sum_probs=22.9
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~ 26 (786)
|+||+.|+++|.+|+|+||....||.
T Consensus 24 L~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 24 CILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred HHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 57999999999999999999876654
No 380
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=58.85 E-value=12 Score=40.55 Aligned_cols=55 Identities=11% Similarity=0.124 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.|.+.+.+ ++|+++++|++|..++ +.+ .+.+ .+|+ .+.|+.||+|+....
T Consensus 235 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~-~v~~---~~g~--~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 235 QTLVEEIEKQLKL--TKVYKGTKVTKLSHSG-SCY-SLEL---DNGV--TLDADSVIVTAPHKA 289 (470)
T ss_dssp HHHHHHHHHTCCS--EEEECSCCEEEEEECS-SSE-EEEE---SSSC--EEEESEEEECSCHHH
T ss_pred HHHHHHHHHhcCC--CEEEeCCceEEEEEcC-CeE-EEEE---CCCC--EEECCEEEECCCHHH
Confidence 3566666665543 7999999999999876 543 2333 5675 488999999998654
No 381
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=57.57 E-value=1.9 Score=45.85 Aligned_cols=17 Identities=41% Similarity=1.145 Sum_probs=15.5
Q ss_pred hhhCcccCcccCCCCCc
Q psy9575 694 LYECILCGCCSTACPSF 710 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~ 710 (786)
..+|+.||.|+.+||..
T Consensus 255 ~~~Ci~Cg~C~~~CP~~ 271 (386)
T 3or1_B 255 NDRCMYCGNCYTMCPAL 271 (386)
T ss_dssp TTTCCCCCHHHHHCTTC
T ss_pred CCcCCccccHHHhCcHh
Confidence 57999999999999984
No 382
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=57.29 E-value=9.9 Score=40.57 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+..+...+.+.+++.||+++.++.++++..+ ++.. .+|+ .+.+|.||+|+|-.+
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~---~~g~--~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIREH------EIVD---EKGN--TIPADITILLPPYTG 270 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEECSS------EEEE---TTSC--EEECSEEEEECCEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEECCC------eEEE---CCCC--EEeeeEEEECCCCCc
Confidence 4567888888888899999999999988533 2333 4665 588999999999443
No 383
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=57.20 E-value=2.7 Score=41.41 Aligned_cols=18 Identities=28% Similarity=0.702 Sum_probs=15.7
Q ss_pred ccccccccccchhhCCCC
Q psy9575 750 RLFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 750 ~~~~C~~Cg~C~~vCP~g 767 (786)
....|+.||.|+.+||..
T Consensus 145 ~~~~Ci~Cg~C~~~CP~~ 162 (238)
T 2wdq_B 145 GLYECILCACCSTSCPSF 162 (238)
T ss_dssp TTTTCCCCCTTGGGCHHH
T ss_pred ccccccccCCchhhCcCC
Confidence 357899999999999975
No 384
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=56.81 E-value=20 Score=39.10 Aligned_cols=57 Identities=11% Similarity=0.015 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+.+.|.+.+.+ .+|+.+++|+.|..++ ++|. +...+ .++...++|+.||+|+.-.
T Consensus 239 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~v~-v~~~~--g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGT--DNIVFGAEVTSMKNVS-EGVT-VEYTA--GGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCG--GGEETTCEEEEEEEET-TEEE-EEEEE--TTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCC--CeEEECCEEEEEEEcC-CeEE-EEEec--CCeEEEEECCEEEECCCHH
Confidence 4577888776643 7899999999999876 6544 33322 2333468999999999743
No 385
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=56.76 E-value=2.9 Score=44.46 Aligned_cols=17 Identities=35% Similarity=0.557 Sum_probs=14.9
Q ss_pred cccccccccchhhCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~g 767 (786)
...|+.||.|+.+||.+
T Consensus 255 ~~~Ci~Cg~C~~~CP~~ 271 (386)
T 3or1_B 255 NDRCMYCGNCYTMCPAL 271 (386)
T ss_dssp TTTCCCCCHHHHHCTTC
T ss_pred CCcCCccccHHHhCcHh
Confidence 35799999999999983
No 386
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=56.66 E-value=2.2 Score=42.26 Aligned_cols=18 Identities=39% Similarity=1.193 Sum_probs=16.0
Q ss_pred chhhCcccCcccCCCCCc
Q psy9575 693 GLYECILCGCCSTACPSF 710 (786)
Q Consensus 693 ~~~~CI~Cg~C~~~CP~~ 710 (786)
....|+.||.|+.+||+.
T Consensus 200 ~~~~C~~Cg~C~~vCP~g 217 (243)
T 1kf6_B 200 GVWSCTFVGYCSEVCPKH 217 (243)
T ss_dssp TGGGCCCCCHHHHHCTTC
T ss_pred CcccCcccCCcchhCCCC
Confidence 367999999999999985
No 387
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=56.57 E-value=11 Score=29.31 Aligned_cols=58 Identities=7% Similarity=-0.051 Sum_probs=37.9
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccccCcceEECCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
+.+++++++ .||-+++..++..+ |.+. .. .|+|.|||+.... .|++++|.++..+.|.
T Consensus 17 ~~~~~~~~~-~tv~~ll~~l~~~~-p~~~---~v------~~~v~vNg~~v~~-~~~L~~gD~V~i~ppv 74 (77)
T 2q5w_D 17 QEDIVLEQA-LTVQQFEDLLFERY-PQIN---NK------KFQVAVNEEFVQK-SDFIQPNDTVALIPPV 74 (77)
T ss_dssp EEECCCSSC-EEHHHHHHHHHHHC-GGGT---TC------CCEEEETTEEECT-TSEECTTCEEEEECSC
T ss_pred EEEEECCCC-CCHHHHHHHHHHHC-cchh---cc------eEEEEECCEECCC-CCCcCCCCEEEEECCC
Confidence 345666666 89999999987743 3331 11 3799999974322 4788887665555554
No 388
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=56.23 E-value=1.8 Score=42.79 Aligned_cols=18 Identities=28% Similarity=0.624 Sum_probs=15.8
Q ss_pred cccccccccchhhCCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~gi 768 (786)
...|+.||.|+.+||+..
T Consensus 148 ~~~Ci~Cg~C~~~CP~~~ 165 (241)
T 2bs2_B 148 LDRCIECGCCIAACGTKI 165 (241)
T ss_dssp HHTCCCCCHHHHTCHHHH
T ss_pred hhhhhccCcCcccCCCCc
Confidence 467999999999999874
No 389
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=56.20 E-value=14 Score=39.70 Aligned_cols=55 Identities=11% Similarity=0.068 Sum_probs=40.6
Q ss_pred HHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 126 LLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 126 i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.+.+++.||++++++.++++.. + ++...+ .+|+...+.++.||+|+|-.+
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~~---~---~~~~~~-~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP---D---KVIYED-LNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS---S---EEEEEC-TTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEeC---C---ceEEEe-eCCCceEeecceEEEeccCCC
Confidence 445566677788999999999999743 2 233333 566667899999999999544
No 390
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=55.85 E-value=16 Score=28.42 Aligned_cols=50 Identities=10% Similarity=0.007 Sum_probs=33.9
Q ss_pred EEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccc---ccccccccCcceEECCC
Q psy9575 577 VNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLA---CITNLNELKQPIIIRPL 643 (786)
Q Consensus 577 v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~la---C~t~v~~~~~~~~i~p~ 643 (786)
+++ ++ +||.+.|.+++.. + +. ++|+|||.-..- =+|.+++|.....+.+.
T Consensus 10 ~e~-~~-~Tl~~LL~~l~~~--~--------~~-----vAV~vNg~iVpr~~~~~~~L~dGD~veIv~~V 62 (73)
T 2kl0_A 10 REV-QS-ASVAALMTELDCT--G--------GH-----FAVALNYDVVPRGKWDETPVTAGDEIEILTPR 62 (73)
T ss_dssp ECC-CC-SBHHHHHHHTTCC--S--------SS-----CEEEESSSEECHHHHTTCBCCTTCEEEEECCC
T ss_pred EEc-CC-CcHHHHHHHcCCC--C--------Cc-----EEEEECCEECChHHcCcccCCCCCEEEEEccc
Confidence 344 45 8999999998762 1 12 799999974332 25778887666556655
No 391
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=55.66 E-value=12 Score=29.52 Aligned_cols=48 Identities=10% Similarity=0.026 Sum_probs=32.0
Q ss_pred CCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccccc---ccccccccCcceEECCC
Q psy9575 581 SNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLA---CITNLNELKQPIIIRPL 643 (786)
Q Consensus 581 ~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~la---C~t~v~~~~~~~~i~p~ 643 (786)
++ +||.+.|.+++... + +. ++|+|||.-..- =+|.+++|.....+.+.
T Consensus 16 ~~-~Tl~~LL~~l~~~~-~--------~~-----vAVavNg~iVpr~~~~~~~L~dGD~IEIv~~V 66 (78)
T 2k5p_A 16 ES-LNVTELLSALKVAQ-A--------EY-----VTVELNGEVLEREAFDATTVKDGDAVEFLYFM 66 (78)
T ss_dssp SC-EEHHHHHHHHTCSC-T--------TT-----CCEEETTEECCTTHHHHCEECSSBCEEECCCC
T ss_pred CC-CcHHHHHHHcCCCC-C--------Cc-----EEEEECCEECChHHcCcccCCCCCEEEEEeee
Confidence 55 89999999987620 1 12 689999974332 25778877665555555
No 392
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=55.42 E-value=2.4 Score=44.86 Aligned_cols=17 Identities=41% Similarity=1.235 Sum_probs=15.6
Q ss_pred hhhCcccCcccCCCCCc
Q psy9575 694 LYECILCGCCSTACPSF 710 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~ 710 (786)
..+|+.||.|+.+||..
T Consensus 238 ~~~C~~Cg~C~~~CP~~ 254 (366)
T 3mm5_B 238 VEKCMYCGNCYTMCPGM 254 (366)
T ss_dssp GGGCCCCCHHHHHCTTC
T ss_pred hhhCCCcchHHHhCCHh
Confidence 67999999999999985
No 393
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=55.24 E-value=2.2 Score=45.69 Aligned_cols=18 Identities=28% Similarity=0.584 Sum_probs=15.9
Q ss_pred hhhCcccCcccCCCCCcc
Q psy9575 694 LYECILCGCCSTACPSFW 711 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~ 711 (786)
..+|+.||.|+.+||...
T Consensus 283 ~~~Ci~Cg~Ci~~CP~~~ 300 (418)
T 3mm5_A 283 NRECVRCMHCINKMPKAL 300 (418)
T ss_dssp TTTCCCCCHHHHHCTTTE
T ss_pred hhhcCccChhHHhCcHhh
Confidence 679999999999999753
No 394
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=54.99 E-value=28 Score=28.66 Aligned_cols=67 Identities=12% Similarity=0.071 Sum_probs=40.0
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCccccc-CCCCCcccceEEEeCCcccccccccccccCcceEECCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRR-SCREGVCGSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~-~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
+.+++++++ .||-+++..+...+ |.+...- .+....=..|.|.|||+... =.|++++|.++..+.|+
T Consensus 28 ~~~~e~~~~-~Tv~~Ll~~L~~~~-p~l~~~l~~~~g~~~~~v~v~VNg~~v~-~~~~L~dGDeV~i~ppv 95 (98)
T 1vjk_A 28 EEEIELPEG-ARVRDLIEEIKKRH-EKFKEEVFGEGYDEDADVNIAVNGRYVS-WDEELKDGDVVGVFPPV 95 (98)
T ss_dssp EEEEEECTT-CBHHHHHHHHHHHC-GGGGGSCBCSSSCTTSSBEEEETTBCCC-TTCBCCTTCEEEEESCC
T ss_pred eEEEECCCC-CCHHHHHHHHHhHC-hhHHHHhhccccccCCcEEEEECCEECC-CCCCCCCCCEEEEECCC
Confidence 345666666 89999999987753 4443211 11000112379999997542 27788887666555554
No 395
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=54.88 E-value=4.1 Score=42.14 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=21.0
Q ss_pred ChHhhhcHh--CCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQ--EGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~--~G~~V~vvek~~~~~g~ 26 (786)
|+||+.|++ .|++|+|+||....+|.
T Consensus 78 lsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 78 LSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp HHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred HHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 589999975 59999999998765544
No 396
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=54.87 E-value=4.3 Score=42.02 Aligned_cols=43 Identities=26% Similarity=0.363 Sum_probs=34.4
Q ss_pred ccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHh
Q psy9575 358 IVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLE 402 (786)
Q Consensus 358 ~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~ 402 (786)
.+||||++|-.+ .-++|.+|.| --++.-+.+|+.|++.+.+.+
T Consensus 282 ~~~~~~~~g~~~-~~~~~~~r~g-~~fg~m~~sg~~~a~~~~~~~ 324 (326)
T 2gjc_A 282 GVDNMYFAGMEV-AELDGLNRMG-PTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp TSTTEEECTHHH-HHHHTCCBCC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHH-HHhcCCCCCC-hhhhhhhhhhHHHHHHHHHHh
Confidence 799999999987 4788988865 335556777999999888765
No 397
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=54.54 E-value=16 Score=39.30 Aligned_cols=55 Identities=13% Similarity=0.130 Sum_probs=39.6
Q ss_pred HHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 126 LLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 126 i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+...+.+.+++.||++++++.++++..+ ++.+.+. +++...+.++.||+|+|-.+
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~------~v~~~~~-~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD------KVIYEDL-NGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS------EEEEECT-TSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC------eEEEEec-CCCceEEeeeEEEECCCCcc
Confidence 4566777888899999999999998543 2333332 23445789999999999443
No 398
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=54.44 E-value=8.9 Score=41.82 Aligned_cols=54 Identities=11% Similarity=0.103 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.|.+.+.+ ++|+++++|++|..++ +.+ .+ ...+| .+.|+.||+|++.+.
T Consensus 236 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~---~v-~~~~g---~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 236 ESLIERLEEVLER--SEIRLETPLLAISRED-GRY---RL-KTDHG---PEYADYVLLTIPHPQ 289 (475)
T ss_dssp HHHHHHHHHHCSS--CEEESSCCCCEEEEET-TEE---EE-ECTTC---CEEESEEEECSCHHH
T ss_pred HHHHHHHHhhccC--CEEEcCCeeeEEEEeC-CEE---EE-EECCC---eEECCEEEECCCHHH
Confidence 3566777666644 7999999999998875 532 22 22566 589999999999754
No 399
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.05 E-value=14 Score=38.76 Aligned_cols=52 Identities=21% Similarity=0.276 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+...+.+.+++.||+++.++.+.++. . + ++.. .+|+ +.++.||+|+|-..
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~---~~g~---i~~D~vi~a~G~~p 234 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLT---NSGF---IEGKVKICAIGIVP 234 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEE---TTEE---EECSCEEEECCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEE---CCCE---EEcCEEEECcCCCc
Confidence 3566677788888999999999999886 2 2 3333 4563 88999999999543
No 400
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=53.65 E-value=12 Score=39.67 Aligned_cols=50 Identities=24% Similarity=0.224 Sum_probs=36.0
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.+||.||+.++ |+.||+||+|||+ ...+. ..+ ....|.-.|++||++++.
T Consensus 244 ~~gi~vd~~~~---------t~~~~IyA~GD~a--~~~~~-~~~--~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 244 KRGILVNDHME---------TSIKDIYACGDVA--EFYGK-NPG--LINIANKQGEVAGLNACG 293 (385)
T ss_dssp SSSEEECTTCB---------CSSTTEEECGGGE--EETTB-CCC--CHHHHHHHHHHHHHHHTT
T ss_pred CCCEEECCCcc---------cCCCCEEEEEeeE--ecCCC-ccc--HHHHHHHHHHHHHHHhcC
Confidence 36799999888 9999999999998 32221 011 245566778888888774
No 401
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=53.08 E-value=10 Score=40.97 Aligned_cols=53 Identities=9% Similarity=0.031 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+.+.|.+.+ |++|+++++|++|..++ +..+.+ . .+|+ .+.|+.||+|++..
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~~v~v---~-~~~~--~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 215 QQVSIRMAEAL---GDDVFLNAPVRTVKWNE-SGATVL---A-DGDI--RVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHHHH---GGGEECSCCEEEEEEET-TEEEEE---E-TTTE--EEEEEEEEECSCGG
T ss_pred HHHHHHHHHhc---CCcEEcCCceEEEEEeC-CceEEE---E-ECCe--EEEcCEEEEcCCHH
Confidence 35666666544 78999999999999875 531122 2 2453 68999999999965
No 402
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=52.80 E-value=12 Score=40.74 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=32.2
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
++++|||.|||.+....+ ..+..|+.+|++|++.+.+.....
T Consensus 420 ~p~~~l~fAG~~t~~~~~-------g~v~GA~~SG~~aA~~i~~~l~~~ 461 (472)
T 1b37_A 420 APVGRVYFTGEHTSEHYN-------GYVHGAYLSGIDSAEILINCAQKK 461 (472)
T ss_dssp CCBTTEEECSGGGCTTTT-------TSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCcEEEeecccCCCCC-------CchhHHHHHHHHHHHHHHHHHHhC
Confidence 789999999998732222 246778899999999998877554
No 403
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=49.57 E-value=4.4 Score=49.87 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=15.9
Q ss_pred cccccccccchhhCCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKGL 768 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~gi 768 (786)
...|+.||.|+.+||.+.
T Consensus 685 ~~kCi~Cg~Cv~vCP~~A 702 (1231)
T 2c42_A 685 PENCIQCNQCAFVCPHSA 702 (1231)
T ss_dssp TTTCCCCCHHHHHCSSCC
T ss_pred CccCCchhhHHHhCCccc
Confidence 467999999999999873
No 404
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=49.03 E-value=25 Score=39.08 Aligned_cols=56 Identities=13% Similarity=-0.042 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
.++...+.+.+++.||+++.++.+..+..++ +.+. +.. .+++ .+.++.|++|+|-.
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~~~-v~~---~~~~--~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DKIL-VEF---SDKT--SELYDTVLYAIGRK 318 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEET-TEEE-EEE---TTSC--EEEESEEEECSCEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecC-CeEE-EEE---cCCC--eEEEEEEEEccccc
Confidence 4567788888889999999999999998875 4332 222 3443 46789999999943
No 405
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=49.02 E-value=54 Score=32.84 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=39.3
Q ss_pred cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 136 HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+++++..+...++...+ +...|+...+...++...+.++.||+|+|-..
T Consensus 200 ~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~p 250 (314)
T 4a5l_A 200 HPKIEVIWNSELVELEGDG-DLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSP 250 (314)
T ss_dssp CTTEEEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred ccceeeEeeeeeEEEEeee-eccceeEEeecccccceeeccccceEeccccc
Confidence 3467777777788887765 77788887776677777899999999999543
No 406
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=48.39 E-value=23 Score=38.49 Aligned_cols=48 Identities=19% Similarity=0.167 Sum_probs=33.6
Q ss_pred cCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 136 HAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 136 ~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
+.|++++.++.|+.+..++ +. +.+.+..+|+...+.++.+|+|||+..
T Consensus 78 ~~gi~~~~~~~V~~id~~~-~~---v~~~~~~~g~~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAA-HT---VEIENLRTGERRTLKYDKLVLALGSKA 125 (472)
T ss_dssp ---CEEECSEEEEEEETTT-TE---EEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred hcCcEEEECCEEEEEECCC-CE---EEEeecCCCCEEEEECCEEEEeCCCCc
Confidence 4699999999999997764 43 233333457666789999999999754
No 407
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=47.84 E-value=3.5 Score=44.27 Aligned_cols=17 Identities=24% Similarity=0.514 Sum_probs=15.4
Q ss_pred hhhCcccCcccCCCCCc
Q psy9575 694 LYECILCGCCSTACPSF 710 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~ 710 (786)
..+|++||.|+.+||..
T Consensus 300 ~~~C~~Cg~Ci~~CP~a 316 (437)
T 3or1_A 300 NKNCTRCMHCINTMPRA 316 (437)
T ss_dssp GGGCCCCSHHHHHCTTT
T ss_pred cccCCchhhhHhhCcHh
Confidence 57999999999999964
No 408
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=47.57 E-value=26 Score=40.18 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=37.8
Q ss_pred HHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 128 HTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 128 ~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.+++.||+++.++.+.++. + + |+.+. .+|+...+.++.||+|+|-..
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~-~--~---~v~~~--~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID-D--D---GLHVV--INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE-T--T---EEEEE--ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe-C--C---eEEEe--cCCeEEEEeCCEEEECCCccc
Confidence 345666778899999999999885 2 2 23332 357556799999999999544
No 409
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=47.09 E-value=7.5 Score=44.94 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=29.4
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
|++||+||+||++. . ..+..|+..|+.||.++..++.+.
T Consensus 639 t~~~~VyaiGD~~~--~--------~~~~~A~~~g~~aa~~i~~~l~g~ 677 (690)
T 3k30_A 639 GEIASVRGIGDAWA--P--------GTIAAAVWSGRRAAEEFDAVLPSN 677 (690)
T ss_dssp TSCSEEEECGGGTS--C--------BCHHHHHHHHHHHHHHTTCCCCCT
T ss_pred cCCCCEEEEeCCCc--h--------hhHHHHHHHHHHHHHHHHhhccCC
Confidence 67999999999982 1 134557888999999988776443
No 410
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=46.25 E-value=7.5 Score=42.57 Aligned_cols=26 Identities=15% Similarity=0.023 Sum_probs=22.2
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~ 26 (786)
+++|+.|+++|.+|+|+||....+|.
T Consensus 33 ~~~a~~l~~~g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 33 CILSGLLSHYGKKILVLDRNPYYGGE 58 (475)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred HHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 46899999999999999998776554
No 411
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=46.13 E-value=25 Score=37.42 Aligned_cols=53 Identities=11% Similarity=0.087 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.|.+. .+.+++.+++|++|..++ ++|. +.+ .+|+ +.|+.||+|++...
T Consensus 206 ~~l~~~l~~~---l~~~v~~~~~V~~i~~~~-~~v~-v~~---~~g~---~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 206 QAMFEHLNAT---LEHPAERNVDITRITRED-GKVH-IHT---TDWD---RESDVLVLTVPLEK 258 (424)
T ss_dssp HHHHHHHHHH---SSSCCBCSCCEEEEECCT-TCEE-EEE---SSCE---EEESEEEECSCHHH
T ss_pred HHHHHHHHHh---hcceEEcCCEEEEEEEEC-CEEE-EEE---CCCe---EEcCEEEECCCHHH
Confidence 3455555443 356788999999998875 6654 333 4563 78999999999753
No 412
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=46.09 E-value=7.5 Score=40.99 Aligned_cols=27 Identities=11% Similarity=0.063 Sum_probs=22.6
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHT 27 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s 27 (786)
|+||+.|+++|.+|+|+|+....||.+
T Consensus 14 l~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 14 AVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp HHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred HHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 578999999999999999987665543
No 413
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=45.26 E-value=8.2 Score=41.18 Aligned_cols=28 Identities=18% Similarity=0.134 Sum_probs=23.3
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChhh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHTV 28 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s~ 28 (786)
|+||+.|+++|.+|+|+||....||.+.
T Consensus 42 l~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 42 SVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred HHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 5799999999999999999876655543
No 414
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=45.07 E-value=7.1 Score=42.84 Aligned_cols=39 Identities=21% Similarity=0.130 Sum_probs=29.9
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
++++|||.||+.+ ..+ +.++..|+.+|++|++.+.+.++
T Consensus 448 ~~~~~l~faG~~~--~~~------~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 448 EPVDKIYFAGDHL--SNA------IAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp SCBTTEEECSGGG--BSS------TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEeEHHh--ccC------ccHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999976 222 33467789999999998877654
No 415
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=45.06 E-value=4 Score=45.98 Aligned_cols=19 Identities=42% Similarity=0.912 Sum_probs=16.7
Q ss_pred hhhCcccCcccCCCCCccc
Q psy9575 694 LYECILCGCCSTACPSFWW 712 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~~~ 712 (786)
.++|+.||.|+.+||+...
T Consensus 187 ~~~Ci~Cg~Cv~~CP~gAi 205 (574)
T 3c8y_A 187 DTNCLLCGQCIIACPVAAL 205 (574)
T ss_dssp GSSCCCCCHHHHHCSSTTE
T ss_pred hhhCCcchhHHHhhccCCc
Confidence 6799999999999998643
No 416
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=44.40 E-value=18 Score=39.98 Aligned_cols=54 Identities=9% Similarity=0.159 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+++.|.+.+. +.+|+++++|++|..++ +..+.+.+ .+|+ .++|+.||+|++-
T Consensus 202 ~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~-~~~v~v~~---~~g~--~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 202 DSVVQRIAQSFP--QNWLKLSCEVKSITREP-SKNVTVNC---EDGT--VYNADYVIITVPQ 255 (516)
T ss_dssp HHHHHHHHTTSC--GGGEETTCCEEEEEECT-TSCEEEEE---TTSC--EEEEEEEEECCCH
T ss_pred HHHHHHHHHhCC--CCEEEECCEEEEEEEcC-CCeEEEEE---CCCc--EEECCEEEECCCH
Confidence 344555544332 36799999999999863 33334443 5664 5789999999973
No 417
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=42.75 E-value=8.3 Score=41.15 Aligned_cols=27 Identities=11% Similarity=0.147 Sum_probs=23.0
Q ss_pred ChHhhhcHhC-CCCEEEEEecCCCCChh
Q psy9575 1 MRASLQLAQE-GLNVAILSKVFPTRSHT 27 (786)
Q Consensus 1 L~AA~~aa~~-G~~V~vvek~~~~~g~s 27 (786)
|+||+.|+++ |.+|+|+||....||.+
T Consensus 20 l~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 20 LTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp HHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 5799999999 99999999987766654
No 418
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=42.19 E-value=40 Score=36.25 Aligned_cols=49 Identities=6% Similarity=0.117 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCC
Q psy9575 125 ALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATG 184 (786)
Q Consensus 125 ~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATG 184 (786)
.+...+.+.+++.||+++.++.+.++.. .. +.. .+|+ .+.++.||+|+|
T Consensus 189 ~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~~---v~~---~~g~--~~~~D~vl~a~G 237 (437)
T 4eqs_A 189 DMNQPILDELDKREIPYRLNEEINAING---NE---ITF---KSGK--VEHYDMIIEGVG 237 (437)
T ss_dssp GGGHHHHHHHHHTTCCEEESCCEEEEET---TE---EEE---TTSC--EEECSEEEECCC
T ss_pred hhHHHHHHHhhccceEEEeccEEEEecC---Ce---eee---cCCe--EEeeeeEEEEec
Confidence 4556677788889999999999887642 22 222 5665 578999999999
No 419
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=42.04 E-value=9.2 Score=41.37 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=28.6
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHH
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSL 401 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~ 401 (786)
++++|||.|||.+..... | .+-.|+.+|++|++.+.+.
T Consensus 413 ~p~~~l~~aG~~~~~~~~------g-~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 413 TPVGPIHFSCSDIAAEGY------Q-HVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp CCBTTEEECCGGGCSTTT------T-SHHHHHHHHHHHHHHHHHH
T ss_pred CCcCceEEeecccccccc------c-chHHHHHHHHHHHHHHHHH
Confidence 789999999997732221 2 4677888999999888764
No 420
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=42.03 E-value=9.2 Score=40.93 Aligned_cols=26 Identities=23% Similarity=0.316 Sum_probs=22.3
Q ss_pred ChHhhhcHhCC-CCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQEG-LNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~~G-~~V~vvek~~~~~g~ 26 (786)
|+||+.|+++| .+|+|+||....||.
T Consensus 19 l~aA~~L~~~g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 19 LAAGMYLEQAGFHDYTILERTDHVGGK 45 (424)
T ss_dssp HHHHHHHHHTTCCCEEEECSSSCSSTT
T ss_pred HHHHHHHHhCCCCcEEEEECCCCCCCc
Confidence 58999999999 899999998766554
No 421
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=41.84 E-value=7.6 Score=42.36 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=22.8
Q ss_pred ChHhhhcHhCCC--CEEEEEecCCCCChh
Q psy9575 1 MRASLQLAQEGL--NVAILSKVFPTRSHT 27 (786)
Q Consensus 1 L~AA~~aa~~G~--~V~vvek~~~~~g~s 27 (786)
|+||++|+++|. +|+|+|+....+|.+
T Consensus 15 LsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 15 LAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp HHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred HHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 589999999999 999999987655543
No 422
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=41.50 E-value=37 Score=27.17 Aligned_cols=68 Identities=15% Similarity=0.111 Sum_probs=41.8
Q ss_pred eeEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcc-cceEEEeCCcccccccccccccCcceEECCC
Q psy9575 573 QKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVC-GSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 573 ~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~C-g~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
.+.+++++++ .||-+++..+... .|.+...-.-..|.- ..|.|-|||+.... .|++.+|.++..+-|+
T Consensus 18 ~~~~~~~~~~-~Tv~~ll~~L~~~-~p~~~~~~l~~~g~l~~~~~v~VN~~~v~~-~~~l~~gDeV~i~Ppv 86 (89)
T 3po0_A 18 RTVRVDVDGD-ATVGDALDALVGA-HPALESRVFGDDGELYDHINVLRNGEAAAL-GEATAAGDELALFPPV 86 (89)
T ss_dssp SEEEEECCTT-CBHHHHHHHHHHH-CGGGHHHHBCTTSCBCTTSEEEETTEECCT-TSBCCTTCEEEEECCC
T ss_pred CeEEEECCCC-CcHHHHHHHHHHH-CcHHHHHHhccCCcccccEEEEECCEECCC-CcccCCCCEEEEECCC
Confidence 3456777776 8999999998774 355432100000111 12789999975432 7888887666666665
No 423
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=39.71 E-value=15 Score=39.17 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=27.1
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHH
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHI 398 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~a 398 (786)
|+|||||.||+-.. + .||.++..+..+|+.|++.+
T Consensus 389 ~p~~gL~laG~~~~-~------~gg~gv~~~~~s~~~~~~~i 423 (425)
T 3ka7_A 389 TPFSGLYVVGDGAK-G------KGGIEVEGVALGVMSVMEKV 423 (425)
T ss_dssp CSSBTEEECSTTSC-C------TTCCHHHHHHHHHHHHHHC-
T ss_pred CCcCCeEEeCCccC-C------CCCCccHHHHHHHHHHHHHh
Confidence 88999999999762 2 24678888888888887654
No 424
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=39.60 E-value=9.5 Score=41.60 Aligned_cols=26 Identities=12% Similarity=0.189 Sum_probs=22.3
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~ 26 (786)
|+||+.|+++|.+|+|+||....||.
T Consensus 29 l~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 29 LAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp HHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred HHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 57999999999999999998765554
No 425
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=39.27 E-value=42 Score=36.61 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcE--EEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNI--MILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~--~~i~AkaVVlATGG~ 186 (786)
..+.+.|.+.+.+ +|+.+++|+.|..++ +.| .+.. .+|+. ..++||.||+|++-.
T Consensus 241 ~~l~~~l~~~l~~---~i~~~~~V~~I~~~~-~~v-~v~~---~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 241 DKLPTAMYRDIQD---KVHFNAQVIKIQQND-QKV-TVVY---ETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp THHHHHHHHHTGG---GEESSCEEEEEEECS-SCE-EEEE---ECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHHhccc---ccccCCEEEEEEECC-CeE-EEEE---ecCCcccceEEeCEEEECCChH
Confidence 3677788776654 799999999999876 554 2333 23321 247899999999854
No 426
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=39.26 E-value=36 Score=36.66 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGG 185 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG 185 (786)
..+...+.+.+++. |+++.++.+.++..+ +++..+. .+|+ .+.++.||+|+|-
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v~----~~g~--~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKVV----TDAG--EYKAELVILATGI 242 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEEE----ETTE--EEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEEE----eCCC--EEECCEEEEeeCC
Confidence 45666777778778 999999999998654 3443332 2443 6889999999994
No 427
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=39.08 E-value=10 Score=41.93 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=31.0
Q ss_pred ccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 358 IVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 358 ~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
+.++||.|||.++...+| -+-.|+-+|.+|++.+.+..+..
T Consensus 470 ~~~rl~FAGe~ts~~~~g-------~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 470 QDSRIRFAGEHTIMDGAG-------CAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp SSSSEEECSTTSCSTTBT-------SHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCcEEEeccccccCCCc-------cchhHHHHHHHHHHHHHHHhhhh
Confidence 567899999988433333 36668889999999998877543
No 428
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=38.93 E-value=10 Score=42.02 Aligned_cols=41 Identities=20% Similarity=0.164 Sum_probs=31.6
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
++++|||.|||.+..... | .+..|+.+|++|++.+.+.+..
T Consensus 416 ~p~~~L~fAG~~t~~~~~------g-~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 416 QPVDRIYFAGTETATHWS------G-YMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp CCBTTEEECSGGGCSSST------T-SHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCEEEeehhhcCcCc------E-EhHHHHHHHHHHHHHHHHHHhc
Confidence 789999999997632221 2 4777999999999999887644
No 429
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=38.88 E-value=28 Score=26.22 Aligned_cols=51 Identities=10% Similarity=0.112 Sum_probs=32.9
Q ss_pred EEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccc---cccccccccCcceEECCC
Q psy9575 577 VNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGL---ACITNLNELKQPIIIRPL 643 (786)
Q Consensus 577 v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~l---aC~t~v~~~~~~~~i~p~ 643 (786)
++++++ +||.+.+..++.. . .. ++|.|||.... --.|.+++|.+...+.|.
T Consensus 10 ~~~~~~-~tv~~ll~~l~~~------~----~~-----v~vavN~~~v~~~~~~~~~L~~gD~v~i~~~V 63 (66)
T 1f0z_A 10 MQCAAG-QTVHELLEQLDQR------Q----AG-----AALAINQQIVPREQWAQHIVQDGDQILLFQVI 63 (66)
T ss_dssp ECCCTT-CCHHHHHHHHTCC------C----SS-----EEEEETTEEECHHHHTTCCCCTTEEECEEESC
T ss_pred EEcCCC-CcHHHHHHHcCCC------C----CC-----EEEEECCEECCchhcCCcCCCCCCEEEEEeec
Confidence 345555 8999999998652 1 12 68999997433 125778876655545443
No 430
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=38.40 E-value=40 Score=36.53 Aligned_cols=47 Identities=13% Similarity=0.119 Sum_probs=32.0
Q ss_pred ceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 139 TNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 139 v~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
|+++.++.+.++..++++.+. +.. ...+|+...+.++.||+|+|-..
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~-v~~-~~~~G~~~~i~~D~vi~a~G~~p 272 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYE-VIY-STKDGSKKSIFTNSVVLAAGRRP 272 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEE-EEE-CCTTSCCEEEEESCEEECCCEEE
T ss_pred EEEEECCEEEEEEEcCCCcEE-EEE-EecCCceEEEEcCEEEECcCCCc
Confidence 899999999998775313332 322 11156555789999999999554
No 431
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=38.28 E-value=26 Score=35.41 Aligned_cols=53 Identities=13% Similarity=0.023 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCC
Q psy9575 128 HTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGG 187 (786)
Q Consensus 128 ~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~ 187 (786)
..+.+.+++.|+.++.++ +..+..++ +++.++.. .+|+ .+.++.||+++||..
T Consensus 184 ~~~~~~l~~~g~~~~~~~-v~~~~~~~-~~~~~v~~---~~g~--~i~~~~~vi~~g~~~ 236 (304)
T 4fk1_A 184 QTIMDELSNKNIPVITES-IRTLQGEG-GYLKKVEF---HSGL--RIERAGGFIVPTFFR 236 (304)
T ss_dssp HHHHHHHHTTTCCEECSC-EEEEESGG-GCCCEEEE---TTSC--EECCCEEEECCEEEC
T ss_pred hhhhhhhhccceeEeeee-EEEeecCC-Ceeeeeec---cccc--eeeecceeeeecccc
Confidence 345566677789988765 66666665 77777665 5665 577899999999865
No 432
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=37.38 E-value=39 Score=27.19 Aligned_cols=52 Identities=12% Similarity=0.022 Sum_probs=32.4
Q ss_pred EEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccc---cccccccccCcceEECCC
Q psy9575 577 VNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGL---ACITNLNELKQPIIIRPL 643 (786)
Q Consensus 577 v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~l---aC~t~v~~~~~~~~i~p~ 643 (786)
++++++..||.+.+.+++.. + .. ++|+|||.... --.|.+++|..+..+.|.
T Consensus 30 ~el~~~~~Tv~dLL~~L~~~--~--------~~-----vaVavNg~iV~~~~~~~~~L~dGD~Vei~~~V 84 (87)
T 1tyg_B 30 VKWKKDTGTIQDLLASYQLE--N--------KI-----VIVERNKEIIGKERYHEVELCDRDVIEIVHFV 84 (87)
T ss_dssp ECCSSSCCBHHHHHHHTTCT--T--------SC-----CEEEETTEEECGGGTTTSBCCSSSEEEEEEEC
T ss_pred EECCCCCCcHHHHHHHhCCC--C--------CC-----EEEEECCEECChhhcCCcCCCCCCEEEEEccc
Confidence 34444227999999998652 1 11 68999997433 225778887655555443
No 433
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=37.30 E-value=62 Score=26.58 Aligned_cols=66 Identities=21% Similarity=0.308 Sum_probs=41.5
Q ss_pred eeEEEEcCCCChhHHHHHHHchhccCCCcccc--cCC--CCCc---ccceEEEeCCcccc---cccccccccCcceEECC
Q psy9575 573 QKFLVNLSSNDKMLLDALHRIKYDIDDSLTLR--RSC--REGV---CGSDAMNINGKNGL---ACITNLNELKQPIIIRP 642 (786)
Q Consensus 573 ~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~--~~C--r~g~---Cg~C~V~vnG~~~l---aC~t~v~~~~~~~~i~p 642 (786)
++++++ + .||-|+++.+...+ |.+... ..+ +..+ ||+=.|.|||.... .-.|++.++.++..+.|
T Consensus 21 ~~~~l~---~-~tv~~ll~~L~~~~-p~l~~~l~~~g~l~~~v~~~~~~~~v~VNg~~v~~~~~~~~~L~~gD~V~i~pp 95 (99)
T 2l52_A 21 PELPLS---G-EKVIDVLLSLTDKY-PALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKDSDEIGILPP 95 (99)
T ss_dssp SEEEEE---C-SSHHHHHHHHHHHC-GGGTTTSBCSCCTTSSCCCBCSSCEEEETTSCGGGTTSTTSCCCTTEEEEEECC
T ss_pred CeEEEe---C-CcHHHHHHHHHHHC-hhHHHHHhcccccccceeccccccEEEECCEEccccCCCCCCCCCCCEEEEECC
Confidence 355565 4 79999999987753 443321 122 2233 88889999997432 56778887766555555
Q ss_pred C
Q psy9575 643 L 643 (786)
Q Consensus 643 ~ 643 (786)
+
T Consensus 96 v 96 (99)
T 2l52_A 96 V 96 (99)
T ss_dssp C
T ss_pred C
Confidence 4
No 434
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=36.65 E-value=8.3 Score=40.75 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCCCc
Q psy9575 123 GHALLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGGGR 188 (786)
Q Consensus 123 g~~i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~~~ 188 (786)
...+.+.|.+.+++.||+++++++|+++.... .++|+.||.|+|..+.
T Consensus 97 r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~------------------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 97 RRGLVHALRDKCRSQGIAIRFESPLLEHGELP------------------LADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCSGGGCC------------------GGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEeccchhcc------------------cccCCEEEECCCCCch
Confidence 35788999999998999999999998885320 1468999999998874
No 435
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=36.55 E-value=12 Score=39.70 Aligned_cols=25 Identities=24% Similarity=0.215 Sum_probs=21.2
Q ss_pred ChHhhhcHhCCCCEEEEEec-CCCCC
Q psy9575 1 MRASLQLAQEGLNVAILSKV-FPTRS 25 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~-~~~~g 25 (786)
|+||+.|+++|.+|+|+|+. ...||
T Consensus 57 L~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 57 LVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp HHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred HHHHHHHHHCCCcEEEEeccccccCC
Confidence 57999999999999999998 55443
No 436
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=36.01 E-value=7.5 Score=42.18 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=27.6
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLE 402 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~ 402 (786)
++++|||.||+.. + |.++..|+.+|+.|++.+.+.+
T Consensus 433 ~~~~~l~~aG~~~----~------g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 433 SAYPGVYMTGASF----E------GVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHSTTEEECSTTT----S------CCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeecC----C------CCCHHHHHHHHHHHHHHHHHHh
Confidence 4689999999954 1 2247789999999998887654
No 437
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=35.59 E-value=29 Score=26.96 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=25.7
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCccc
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNG 624 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~ 624 (786)
.-+++++++ +||.|.|+++++.. .. ++|++||+..
T Consensus 12 ~~~~ev~~g-~Tv~dLL~~Lgl~~----------~~-----VvV~vNG~~v 46 (74)
T 2l32_A 12 TSEVAVDDD-GTYADLVRAVDLSP----------HE-----VTVLVDGRPV 46 (74)
T ss_dssp EEEEECSTT-CSHHHHHHTTCCCS----------SC-----CCEECCCCCC
T ss_pred ceeEEcCCC-CcHHHHHHHcCCCc----------ce-----EEEEECCEEC
Confidence 345677777 89999999998831 11 5799999743
No 438
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=35.42 E-value=14 Score=39.92 Aligned_cols=26 Identities=12% Similarity=-0.064 Sum_probs=21.9
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~ 26 (786)
|+||+.|+++|.+|+|+||....+|.
T Consensus 19 l~~a~~l~~~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 19 CILSGIMSVNGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred HHHHHHHHHCCCcEEEEecCCCcccc
Confidence 47899999999999999998765543
No 439
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=35.17 E-value=12 Score=40.98 Aligned_cols=41 Identities=10% Similarity=-0.052 Sum_probs=30.6
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
+++++||.|||.+.+..+| .+-.|+-+|++|++.+.+....
T Consensus 447 ~p~~~l~fAGe~t~~~~~g-------~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 447 EKHGGVVFANSDWALGWRS-------FIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp CCBTTEEECCGGGCSSSTT-------SHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCEEEechhhhcCCce-------EEEhHHHHHHHHHHHHHHHhcc
Confidence 5789999999987323222 3677899999999988877643
No 440
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=34.52 E-value=34 Score=26.77 Aligned_cols=61 Identities=11% Similarity=0.059 Sum_probs=37.3
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccccCcceEECCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
+.+++ +++ .||-++++.++.. .|.+...-. . +.|.|.|||+.. .=.|++++|.++..+-|.
T Consensus 18 ~~~~~-~~~-~tv~~ll~~L~~~-~p~~~~~l~--~---~~~~v~vN~~~v-~~~~~l~~gD~V~i~Ppv 78 (81)
T 1fm0_D 18 ATEVA-ADF-PTVEALRQHMAAQ-SDRWALALE--D---GKLLAAVNQTLV-SFDHPLTDGDEVAFFPPV 78 (81)
T ss_dssp EEEEC-SCC-SBHHHHHHHHHTT-CHHHHHHHC--C---TTCEEEETTEEC-CTTCBCCTTCEEEEECCC
T ss_pred eEEEc-CCC-CCHHHHHHHHHHH-ChhHHHHhc--C---CCEEEEECCEEC-CCCCCCCCCCEEEEeCCC
Confidence 45666 555 7999999998764 344432110 0 126899999743 236777776655555554
No 441
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=34.42 E-value=13 Score=40.83 Aligned_cols=58 Identities=5% Similarity=0.056 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhcCC-ceEEeceEEEeeeecCCCC-----EEEEEEEEcCCCcE-EEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAK-TNFFIEWMAIDLISDSEGD-----ILGVVALEMETGNI-MILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~G-v~i~~~~~v~~L~~~~~g~-----v~G~~~~~~~~g~~-~~i~AkaVVlATGG~ 186 (786)
..+.+.|.+. .+ ++|+.+++|++|..++ ++ ++++...+ .+|+. ..+.|+.||+|+.-.
T Consensus 243 ~~l~~~l~~~---l~~~~i~~~~~V~~I~~~~-~~~~~~~~~~v~~~~-~~g~~~~~~~ad~VI~a~p~~ 307 (504)
T 1sez_A 243 QTLTDAICKD---LREDELRLNSRVLELSCSC-TEDSAIDSWSIISAS-PHKRQSEEESFDAVIMTAPLC 307 (504)
T ss_dssp HHHHHHHHTT---SCTTTEETTCCEEEEEEEC-SSSSSSCEEEEEEBC-SSSSCBCCCEESEEEECSCHH
T ss_pred HHHHHHHHhh---cccceEEcCCeEEEEEecC-CCCcccceEEEEEcC-CCCccceeEECCEEEECCCHH
Confidence 3456666543 35 7899999999999876 43 35555422 34422 257899999999853
No 442
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=34.16 E-value=18 Score=39.58 Aligned_cols=52 Identities=10% Similarity=0.159 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhcCCceEEec--eEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIE--WMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~--~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
..+.++|.+.+.+. +|..+ ++|++|..++ ++ +.+ .+|+ .+.|+.||+|+...
T Consensus 216 ~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~-~~---v~~---~~G~--~~~ad~VI~a~p~~ 269 (484)
T 4dsg_A 216 GIIYQAIKEKLPSE--KLTFNSGFQAIAIDADA-KT---ITF---SNGE--VVSYDYLISTVPFD 269 (484)
T ss_dssp HHHHHHHHHHSCGG--GEEECGGGCEEEEETTT-TE---EEE---TTSC--EEECSEEEECSCHH
T ss_pred HHHHHHHHhhhhhC--eEEECCCceeEEEEecC-CE---EEE---CCCC--EEECCEEEECCCHH
Confidence 56788888777543 67777 5699998875 53 333 5665 58899999999743
No 443
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=33.95 E-value=39 Score=37.60 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=27.9
Q ss_pred HHhcCCceEEe--ceEEEeeeecCCCCEEEEEEEEcCCCcEEEEEeCeEEEcCCCC
Q psy9575 133 RNLHAKTNFFI--EWMAIDLISDSEGDILGVVALEMETGNIMILESKITILATGGG 186 (786)
Q Consensus 133 ~~~~~Gv~i~~--~~~v~~L~~~~~g~v~G~~~~~~~~g~~~~i~AkaVVlATGG~ 186 (786)
.+.+.+|++.. ...|.++..+ |+++ .+| .+.+|.||+|||=-
T Consensus 347 al~~~nV~lv~~~~~~I~~it~~------gv~~---~dG---~~~~D~IV~ATGf~ 390 (545)
T 3uox_A 347 TYNRDNVHLVDIREAPIQEVTPE------GIKT---ADA---AYDLDVIIYATGFD 390 (545)
T ss_dssp HTTSTTEEEEETTTSCEEEEETT------EEEE---SSC---EEECSEEEECCCCB
T ss_pred HhcCCCEEEEecCCCCceEEccC------eEEe---CCC---eeecCEEEECCccc
Confidence 33444788775 6667666422 4554 566 47899999999943
No 444
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=33.60 E-value=25 Score=38.52 Aligned_cols=38 Identities=26% Similarity=0.277 Sum_probs=30.2
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
++++|||.||+... | .++..|+.+|+.|++.+.+....
T Consensus 458 ~~~~~l~~aG~~~~----g------~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 458 KNLPGLFYAGNHRG----G------LSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp HHSTTEEECCSSSS----C------SSHHHHHHHHHHHHHHHHHHHSS
T ss_pred HhCCCEEEEeecCC----C------CCHHHHHHHHHHHHHHHHHHHhh
Confidence 67899999999762 2 24777999999999999887643
No 445
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=33.50 E-value=7.5 Score=44.04 Aligned_cols=17 Identities=41% Similarity=0.858 Sum_probs=15.1
Q ss_pred hhhCcccCcccCCCCCc
Q psy9575 694 LYECILCGCCSTACPSF 710 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~~ 710 (786)
...||.||-|+.-||.-
T Consensus 52 ~~~c~~~~~~~~~cp~~ 68 (608)
T 3j16_B 52 EILCIGCGICVKKCPFD 68 (608)
T ss_dssp TTTCCCCCHHHHHCSSC
T ss_pred hhhccccccccccCCcc
Confidence 46999999999999964
No 446
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=33.34 E-value=17 Score=38.56 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=22.6
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHT 27 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s 27 (786)
|++|+.|+++|.+|+|+|+....+|.+
T Consensus 16 l~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 16 AVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp HHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred HHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 478999999999999999987765543
No 447
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=32.51 E-value=90 Score=33.29 Aligned_cols=55 Identities=11% Similarity=0.104 Sum_probs=38.0
Q ss_pred HHHHHHHHHhcCCceEEeceEEEeeeecCCCCEEEEEEEEc-CCCc---EEEEEeCeEEEcCCCC
Q psy9575 126 LLHTLYQRNLHAKTNFFIEWMAIDLISDSEGDILGVVALEM-ETGN---IMILESKITILATGGG 186 (786)
Q Consensus 126 i~~~L~~~~~~~Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~-~~g~---~~~i~AkaVVlATGG~ 186 (786)
+...+.+.+++.||+++.++.++++..+ . +.+.+. .+|+ ...+.++.||+|+|-.
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~---~---v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN---K---MYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT---E---EEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC---e---EEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 4556677778899999999999998532 2 222221 2332 4568999999999843
No 448
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=32.40 E-value=12 Score=42.44 Aligned_cols=17 Identities=29% Similarity=0.579 Sum_probs=15.0
Q ss_pred cccccccccchhhCCCC
Q psy9575 751 LFRCRSIMNCVDTCPKG 767 (786)
Q Consensus 751 ~~~C~~Cg~C~~vCP~g 767 (786)
...|+.||-|+..||.+
T Consensus 52 ~~~c~~~~~~~~~cp~~ 68 (608)
T 3j16_B 52 EILCIGCGICVKKCPFD 68 (608)
T ss_dssp TTTCCCCCHHHHHCSSC
T ss_pred hhhccccccccccCCcc
Confidence 35799999999999976
No 449
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=31.81 E-value=27 Score=37.21 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=22.4
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~ 26 (786)
|+||+.|+++|.+|+|+||....+|.
T Consensus 13 LsaA~~La~~G~~V~vlE~~~~~GG~ 38 (421)
T 3nrn_A 13 LLAGAFLARNGHEIIVLEKSAMIGGR 38 (421)
T ss_dssp HHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred HHHHHHHHHCCCeEEEEeCCCCCCce
Confidence 58999999999999999998765554
No 450
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=31.38 E-value=16 Score=39.20 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=19.3
Q ss_pred ChHhhhcHhCCCCEEEEEecC
Q psy9575 1 MRASLQLAQEGLNVAILSKVF 21 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~ 21 (786)
|++|+.|+++|.+|+|+||..
T Consensus 35 l~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 35 LHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp HHHHHHHHHTTCEEEEEESCC
T ss_pred HHHHHHHHHCCCeEEEEcCCC
Confidence 579999999999999999975
No 451
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=31.37 E-value=41 Score=31.24 Aligned_cols=39 Identities=13% Similarity=0.059 Sum_probs=29.4
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
+++.+||.|||.+. ..+| .+-.|+-+|.+|++.+.+.+.
T Consensus 115 ~p~grl~FAGe~ts-~~~g-------~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 115 RPEGPVYFAGEHVS-LKHA-------WIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp SCBTTEEECSGGGT-TSTT-------SHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCcEEEEEHHHc-CCcc-------CHHHHHHHHHHHHHHHHHHhc
Confidence 56789999999884 2332 366788899999988887653
No 452
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=31.35 E-value=17 Score=41.40 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=21.8
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCC
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRS 25 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g 25 (786)
|+||+.|++.|++|+||||....+|
T Consensus 59 l~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 59 CTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred HHHHHHHHhCCCcEEEEeccCCCCC
Confidence 4799999999999999999877554
No 453
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=31.26 E-value=43 Score=38.74 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=22.3
Q ss_pred ChHhhhcHhCCCCEEEEEecCCCCChh
Q psy9575 1 MRASLQLAQEGLNVAILSKVFPTRSHT 27 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~~~g~s 27 (786)
|+||+.|++.|++|+|+|+....+|..
T Consensus 402 l~aA~~L~~~G~~Vtlie~~~~~GG~~ 428 (729)
T 1o94_A 402 SEAARVLMESGYTVHLTDTAEKIGGHL 428 (729)
T ss_dssp HHHHHHHHHTTCEEEEECSSSSTTTTH
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcCCee
Confidence 579999999999999999987655443
No 454
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=31.05 E-value=67 Score=34.48 Aligned_cols=43 Identities=26% Similarity=0.290 Sum_probs=35.1
Q ss_pred ccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 358 IVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 358 ~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
.-+|++.+||++ ..+ +++.|.++..|+..|..+++.+++.+..
T Consensus 280 ~~~~v~lvGDAA-h~~---~P~~G~G~~~Ai~da~~la~~l~~~l~~ 322 (453)
T 3atr_A 280 AWNGIIVIGDSG-FTV---NPVHGGGKGSAMISGYCAAKAILSAFET 322 (453)
T ss_dssp EETTEEECGGGG-TCS---CTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCEEEEeCcc-cCC---CCCccccHHHHHHHHHHHHHHHHHHHHc
Confidence 468899999998 233 5678899999999999999998887653
No 455
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=29.69 E-value=9 Score=38.34 Aligned_cols=16 Identities=31% Similarity=0.791 Sum_probs=14.5
Q ss_pred hhhCcccCcccCCCCC
Q psy9575 694 LYECILCGCCSTACPS 709 (786)
Q Consensus 694 ~~~CI~Cg~C~~~CP~ 709 (786)
..+|+.|+.|+.+||.
T Consensus 200 ~~~C~~C~~C~~vCp~ 215 (265)
T 2pa8_D 200 ELSCTLCEECLRYCNG 215 (265)
T ss_dssp GGGCCCCCHHHHHHTT
T ss_pred cccCCCchHHHHhCCC
Confidence 5799999999999993
No 456
>1rws_A Hypothetical protein PF1061; residual dipolar couplings, structural genomics, unknown FUN; NMR {Pyrococcus furiosus} SCOP: d.15.3.2 PDB: 1sf0_A
Probab=29.32 E-value=24 Score=27.54 Aligned_cols=50 Identities=14% Similarity=0.174 Sum_probs=32.1
Q ss_pred EEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccccCcceEECCC
Q psy9575 577 VNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 577 v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
++++++ +||.+++..++.. . .. |+|.|||+... =.|++++|.++..+.|+
T Consensus 25 ~~~~~~-~Tv~dLl~~L~~~------~----~~-----v~VavNg~~v~-~~~~L~dGD~V~i~ppv 74 (77)
T 1rws_A 25 IEWREG-MKVRDILRAVGFN------T----ES-----AIAKVNGKVVL-EDDEVKDGDFVEVIPVV 74 (77)
T ss_dssp CCCCSS-CCHHHHHHTTTCS------S----CS-----SCEEETTEEEC-SSSCCCSSCCCBCSCCC
T ss_pred EECCCC-CcHHHHHHHhCCC------C----cC-----EEEEECCEECC-CCCCcCCCCEEEEEccc
Confidence 455555 8999999988741 1 12 68999997432 13788877655444443
No 457
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=28.39 E-value=15 Score=38.61 Aligned_cols=37 Identities=8% Similarity=0.030 Sum_probs=28.4
Q ss_pred CceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 360 NGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 360 pGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
.++..+||++ |-.++++|.++.-|+-.+...++.++.
T Consensus 262 grv~LvGDAA----h~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 262 GKLVLLGDAL----QSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp TTEEECGGGT----CCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccc----cccCCCccccHHHHHHHHHHHHHHHhc
Confidence 6799999998 333567888888888888877777654
No 458
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=27.61 E-value=71 Score=24.47 Aligned_cols=51 Identities=16% Similarity=0.073 Sum_probs=34.7
Q ss_pred hhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccccCcceEECCC
Q psy9575 584 KMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 584 ~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
.||-+++..++. .|.|... - ..|.|-|||.....-.|++++|.++..+-|.
T Consensus 21 ~tv~~ll~~L~~--~~~l~~~--l-----~~~~vavN~~~v~~~~~~l~~gDeV~i~Ppv 71 (74)
T 3rpf_C 21 NDLKELRAILQE--KEGLKEW--L-----GVCAIALNDHLIDNLNTPLKDGDVISLLPPV 71 (74)
T ss_dssp SSHHHHHHHHHT--CTTTTTT--T-----TTCEEEESSSEECCTTCCCCTTCEEEEECCB
T ss_pred CcHHHHHHHHHH--CcCHHHH--h-----hccEEEECCEEcCCCCcCCCCCCEEEEECCC
Confidence 799999999876 2444321 1 2389999998644567888887666556554
No 459
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=27.35 E-value=12 Score=44.05 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=15.6
Q ss_pred hhCcccCcccCCCCCccc
Q psy9575 695 YECILCGCCSTACPSFWW 712 (786)
Q Consensus 695 ~~CI~Cg~C~~~CP~~~~ 712 (786)
..|+.||.|+.+||+...
T Consensus 218 ~~C~~CG~Cv~vCP~gAl 235 (783)
T 3i9v_3 218 LPSGFSGNITDICPVGAL 235 (783)
T ss_dssp CCSTTTTTHHHHCSSSSE
T ss_pred CCCccchhHHhhcccCce
Confidence 379999999999999744
No 460
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=26.84 E-value=18 Score=39.38 Aligned_cols=36 Identities=17% Similarity=0.120 Sum_probs=27.8
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLE 402 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~ 402 (786)
++++|||.|||.. + |.++..|+.+|+.|++.+.+.+
T Consensus 430 ~~~~~l~~aG~~~----~------g~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 430 AQYPGIYLAGLAY----D------GVGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp HHSTTEEECSTTT----S------CSSHHHHHHHHHHHHHHHHHTC
T ss_pred hhCCCEEEEccCC----C------CCCHHHHHHHHHHHHHHHHHHh
Confidence 5689999999954 1 2247789999999998887755
No 461
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=26.46 E-value=60 Score=34.41 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=27.1
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
+++.+||.|||.++...+| -+-.|+-+|++|++.+..
T Consensus 388 ~p~g~~~fAGe~t~~~~~g-------~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 388 EPAGRIHFVGSDVSLEFPG-------YIEGALETAECAVNAILH 424 (431)
T ss_dssp SCBTTEEECSGGGCSSSTT-------SHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEehhhhccCCe-------EehHHHHHHHHHHHHHHh
Confidence 6788999999877444443 356688889888877653
No 462
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=25.86 E-value=42 Score=37.29 Aligned_cols=26 Identities=19% Similarity=0.123 Sum_probs=21.3
Q ss_pred ChHhhhcH-hCCCCEEEEEecCCCCCh
Q psy9575 1 MRASLQLA-QEGLNVAILSKVFPTRSH 26 (786)
Q Consensus 1 L~AA~~aa-~~G~~V~vvek~~~~~g~ 26 (786)
|+||+.|+ +.|.+|+|+||....+|.
T Consensus 21 l~aA~~L~~~~G~~v~viE~~~~~GGt 47 (540)
T 3gwf_A 21 IYAVHKLHHELGLTTVGFDKADGPGGT 47 (540)
T ss_dssp HHHHHHHHHTTCCCEEEEESSSSSCTH
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCCCc
Confidence 47899999 899999999998665544
No 463
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=25.46 E-value=64 Score=37.10 Aligned_cols=59 Identities=7% Similarity=0.025 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhcCCceEEeceEEE--eeeecCCCC---EEEEEE-EEcCCCcEEEEEeCeEEEcCC
Q psy9575 124 HALLHTLYQRNLHAKTNFFIEWMAI--DLISDSEGD---ILGVVA-LEMETGNIMILESKITILATG 184 (786)
Q Consensus 124 ~~i~~~L~~~~~~~Gv~i~~~~~v~--~L~~~~~g~---v~G~~~-~~~~~g~~~~i~AkaVVlATG 184 (786)
..+.++|.+.+.+ |..|..+++|+ .|..++++. ...+.+ .+ .+|+...+.||.||+|+-
T Consensus 347 ~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~-~~G~~~~~~aD~VIvTvP 411 (721)
T 3ayj_A 347 VEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYD-SHNAVHSEAYDFVILAVP 411 (721)
T ss_dssp HHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEE-TTCCEEEEEESEEEECSC
T ss_pred HHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEe-cCCceEEEEcCEEEECCC
Confidence 5778888888743 44566788999 998764231 111322 23 567666789999999875
No 464
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=24.95 E-value=56 Score=37.28 Aligned_cols=46 Identities=9% Similarity=0.062 Sum_probs=31.8
Q ss_pred CceEEeceEEEeeeecCCCCEEEEEEEEc-CCCcEEEEEeCeEEEcCCC
Q psy9575 138 KTNFFIEWMAIDLISDSEGDILGVVALEM-ETGNIMILESKITILATGG 185 (786)
Q Consensus 138 Gv~i~~~~~v~~L~~~~~g~v~G~~~~~~-~~g~~~~i~AkaVVlATGG 185 (786)
+++|..+++|+.|..++ +.| -+.+.+. .+++...+.|+.||+|+.-
T Consensus 410 ~l~I~l~~~V~~I~~~~-~~v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~ 456 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTA-SGC-EVIAVNTRSTSQTFIYKCDAVLCTLPL 456 (662)
T ss_dssp TCEEETTEEEEEEEEET-TEE-EEEEEESSCTTCEEEEEESEEEECCCH
T ss_pred cCceecCCeEEEEEECC-CcE-EEEEeecccCCCCeEEEeCEEEECCCH
Confidence 67899999999999876 433 2333221 1222457899999999983
No 465
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=24.75 E-value=20 Score=39.16 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=29.7
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLEL 403 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~ 403 (786)
+++++||.|||.+. ..|| .+..|+-+|++|++.+.+.+.
T Consensus 447 ~p~~~l~fAGe~t~-~~~g-------~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 447 ASQGRIYFAGEYTA-QAHG-------WIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp CCBTTEEECSGGGS-SSSS-------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcccc-cCCc-------CHHHHHHHHHHHHHHHHHHhc
Confidence 57899999999872 1122 366789999999999888764
No 466
>2l05_A Serine/threonine-protein kinase B-RAF; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=24.05 E-value=1.1e+02 Score=24.88 Aligned_cols=68 Identities=18% Similarity=0.206 Sum_probs=38.3
Q ss_pred CCcceeEEEEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEe--CCc-cccccccccccc-CcceEECCCC
Q psy9575 569 KPYMQKFLVNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNI--NGK-NGLACITNLNEL-KQPIIIRPLP 644 (786)
Q Consensus 569 ~~~~~~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~v--nG~-~~laC~t~v~~~-~~~~~i~p~~ 644 (786)
+|.-|--.|++.+| +|+-|||.++=.. -.|. +.. |.|-. +|. ...+=.|-+... .+++.++-++
T Consensus 24 LPNqQrT~V~VrpG-~tlrdAL~KaLk~--R~L~----pe~-----C~Vy~~~~~~~~~IdWdtDi~~L~~eEL~Ve~ld 91 (95)
T 2l05_A 24 LPNKQRTVVPARCG-VTVRDSLKKALMM--RGLI----PEC-----CAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLE 91 (95)
T ss_dssp ETTTEEEEEECCTT-CBHHHHHHHHHHH--HTCC----GGG-----EEEEEEETTEEEEECTTSBGGGGTTCEEEEEESC
T ss_pred CCCCCeEEEEecCC-cCHHHHHHHHHHH--cCCC----HHH-----cEEEEcCCCCccccchhHhhhhccCcEEEEEEec
Confidence 45556667999988 9999999875221 1122 122 77764 352 222333333322 3566777777
Q ss_pred CCCc
Q psy9575 645 GLPV 648 (786)
Q Consensus 645 ~~~~ 648 (786)
+||+
T Consensus 92 ~~P~ 95 (95)
T 2l05_A 92 NVPL 95 (95)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 7763
No 467
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=24.04 E-value=33 Score=35.27 Aligned_cols=33 Identities=6% Similarity=-0.133 Sum_probs=26.1
Q ss_pred ccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHH
Q psy9575 358 IVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILS 400 (786)
Q Consensus 358 ~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~ 400 (786)
..||||.|||-.. |.++-.|+.+|+.|++.+.+
T Consensus 308 ~~~~l~laGd~~~----------g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 308 HKPFLACGGDGFT----------QSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp TTTEEEECSGGGS----------CSSHHHHHHHHHHHHHHHTT
T ss_pred CCccEEEEccccC----------CCCccHHHHHHHHHHHHHHh
Confidence 5799999999651 23688899999999887654
No 468
>2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis}
Probab=23.95 E-value=81 Score=23.81 Aligned_cols=43 Identities=21% Similarity=0.040 Sum_probs=26.3
Q ss_pred EcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccccC
Q psy9575 578 NLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELK 635 (786)
Q Consensus 578 ~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~ 635 (786)
+++++ +|++|.+..++.. +... . .+++|||+.. .-.++++++.
T Consensus 14 ~~~~g-~T~~dla~~i~~~----l~~~----~-----vaa~vNg~lv-dl~~~L~~~~ 56 (73)
T 2kmm_A 14 RLPQG-ATALDFAYSLHSD----LGDH----C-----IGAKVNHKLV-PLSYVLNSGD 56 (73)
T ss_dssp EECTT-CBHHHHHHHHCSH----HHHT----E-----EEEEETTEEC-CTTCBCCSSS
T ss_pred EcCCC-CcHHHHHHHHhhc----cccc----e-----EEEEECCEEe-CCCcCcCCCC
Confidence 34455 8999999887432 1111 1 5689999742 2246776654
No 469
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=23.54 E-value=93 Score=23.01 Aligned_cols=50 Identities=18% Similarity=0.145 Sum_probs=32.5
Q ss_pred EEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccc-c--ccccccccCcceEECCC
Q psy9575 577 VNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGL-A--CITNLNELKQPIIIRPL 643 (786)
Q Consensus 577 v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~l-a--C~t~v~~~~~~~~i~p~ 643 (786)
+++ ++ +||.+.+..++.. . . .++|.|||.... + -.|++++|.+...+.|.
T Consensus 9 ~~~-~~-~tv~~ll~~l~~~------~----~-----~v~vavN~~~v~~~~~~~~~L~dgD~v~i~~~V 61 (64)
T 2cu3_A 9 RPL-EG-KTLKEVLEEMGVE------L----K-----GVAVLLNEEAFLGLEVPDRPLRDGDVVEVVALM 61 (64)
T ss_dssp ECC-TT-CCHHHHHHHHTBC------G----G-----GEEEEETTEEEEGGGCCCCCCCTTCEEEEEECC
T ss_pred EEc-CC-CcHHHHHHHcCCC------C----C-----cEEEEECCEECCccccCCcCCCCCCEEEEEeec
Confidence 445 55 7999999998652 1 1 268999997432 2 35778877655555554
No 470
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=23.23 E-value=1.4e+02 Score=22.48 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=31.0
Q ss_pred EEcCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccccCcceEECCC
Q psy9575 577 VNLSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELKQPIIIRPL 643 (786)
Q Consensus 577 v~~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~~~~~i~p~ 643 (786)
++++++ +||.+.+++++.. . .. ++|.|||.... =.+.+++|.....+.|.
T Consensus 18 ~~~~~~-~tv~~Ll~~l~~~------~----~~-----v~vavN~~~v~-~~~~L~~gD~V~ii~~V 67 (70)
T 1ryj_A 18 LESGAP-RRIKDVLGELEIP------I----ET-----VVVKKNGQIVI-DEEEIFDGDIIEVIRVI 67 (70)
T ss_dssp EEESSC-CBHHHHHHHTTCC------T----TT-----EEEEETTEECC-TTSBCCTTCEEEEEECT
T ss_pred EECCCC-CcHHHHHHHhCCC------C----CC-----EEEEECCEECC-CcccCCCCCEEEEEecc
Confidence 344555 8999999998652 1 11 68999997432 12367776555545443
No 471
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=23.19 E-value=60 Score=25.44 Aligned_cols=42 Identities=10% Similarity=0.041 Sum_probs=26.6
Q ss_pred cCCCChhHHHHHHHchhccCCCcccccCCCCCcccceEEEeCCcccccccccccccC
Q psy9575 579 LSSNDKMLLDALHRIKYDIDDSLTLRRSCREGVCGSDAMNINGKNGLACITNLNELK 635 (786)
Q Consensus 579 ~~~~~~tiL~al~~~~~~~~~~l~~~~~Cr~g~Cg~C~V~vnG~~~laC~t~v~~~~ 635 (786)
+++| .|++|++.+++. .|.- .| +..+|||+.+ .-.++++++.
T Consensus 20 lp~G-aT~~D~A~~Ih~----~lg~--~~-------v~AkVNG~~v-~L~~~L~~gd 61 (78)
T 3hvz_A 20 LPIG-STVIDFAYAIHS----AVGN--RM-------IGAKVDGRIV-PIDYKVKTGE 61 (78)
T ss_dssp EETT-CBHHHHHHHHCH----HHHH--TE-------EEEEETTEEE-CTTCBCCTTC
T ss_pred ecCC-CCHHHHHHHhhh----hhhc--ce-------EEEEECCEEc-CCCcccCCCC
Confidence 3455 899999988754 2221 12 4579999753 3347777754
No 472
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=23.10 E-value=33 Score=36.48 Aligned_cols=22 Identities=18% Similarity=0.166 Sum_probs=19.5
Q ss_pred ChHhhhcHhCCCCEEEEEecCC
Q psy9575 1 MRASLQLAQEGLNVAILSKVFP 22 (786)
Q Consensus 1 L~AA~~aa~~G~~V~vvek~~~ 22 (786)
+.||+.|++.|.+|+|+|+...
T Consensus 14 ~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 14 SEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp HHHHHHHHHTTCCEEEECCTTT
T ss_pred HHHHHHHHHCCCcEEEEeccCC
Confidence 3689999999999999999764
No 473
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=21.90 E-value=37 Score=30.93 Aligned_cols=52 Identities=19% Similarity=0.040 Sum_probs=39.2
Q ss_pred ccCcccCCCCcccccCCCCCcccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhhc
Q psy9575 337 MGGIPTNIYGQVIIPNNDNNKIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELKK 405 (786)
Q Consensus 337 ~GGi~vd~~~~vl~~~~~~~t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 405 (786)
.|.|.||+.++ |++||+||+||++. ..+ + ....|.-.|++|+.++..++++.
T Consensus 122 ~g~i~vd~~~~---------t~~~~i~a~GD~~~-~~~---~----~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 122 GAYIDTDEGGR---------TSYPRVYAAGVARG-KVP---G----HAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp TTEECCCTTCB---------CSSTTEEECGGGGT-CCS---C----CHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CceEEeCCCCC---------cCCCCEEEeecccC-cch---h----hHHHHHHhHHHHHHHHHHHhhhc
Confidence 35678999888 99999999999983 221 1 23456667999999999887654
No 474
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=20.54 E-value=1.2e+02 Score=23.96 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=37.3
Q ss_pred eEEEEcCCCChhHHHHHHHchhccCCCcccc--cCCCCCcccceEEEeCCcccc---cccccccccCcceEECCC
Q psy9575 574 KFLVNLSSNDKMLLDALHRIKYDIDDSLTLR--RSCREGVCGSDAMNINGKNGL---ACITNLNELKQPIIIRPL 643 (786)
Q Consensus 574 ~~~v~~~~~~~tiL~al~~~~~~~~~~l~~~--~~Cr~g~Cg~C~V~vnG~~~l---aC~t~v~~~~~~~~i~p~ 643 (786)
+.+++ .+ .||-++++.+...+ |.+... .... |.-..|.|.|||.... -=.|+++++.++..+.|+
T Consensus 18 ~~~~~--~~-~tv~~ll~~l~~~~-p~~~~~~l~~~~-g~~~~v~v~vN~~~v~~~~~~~~~l~~gD~V~i~ppv 87 (90)
T 2g1e_A 18 EETFN--GI-SKISELLERLKVEY-GSEFTKQMYDGN-NLFKNVIILVNGNNITSMKGLDTEIKDDDKIDLFPPV 87 (90)
T ss_dssp EEEES--SC-CBHHHHHHHHHHHS-CHHHHHHHCCSS-CSTTTCEEEESSSBGGGTCSSSCBCCTTCEEEEECCT
T ss_pred EEEcC--CC-CcHHHHHHHHHHHC-cchhhhcccccc-CcCcceEEEECCEEccccCCCCcCCCCCCEEEEeCCC
Confidence 44444 44 79999999987753 443221 0000 0112378999997432 246778776665555554
No 475
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=20.35 E-value=1.7e+02 Score=33.09 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=30.0
Q ss_pred cccCceeeecccCCccCCCCCccChhhhHHHHHHHHHHHHHHHHHhhh
Q psy9575 357 KIVNGLYAIGECACVSVHGANRLGTNSLLDLLVFGRSAGNHILSLELK 404 (786)
Q Consensus 357 t~IpGLyAaGe~a~gg~~Ga~rlgg~~l~~a~v~G~~Ag~~aa~~~~~ 404 (786)
+++++||.|||.++...+| .+..|+.+|++|++.+.+...+
T Consensus 620 ~~~grl~FAGe~ts~~~~g-------~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 620 QPIPRLFFAGEHTIRNYPA-------TVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp -CCCCEEECSGGGCTTSTT-------SHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEeccccCCCCc-------CHHHHHHHHHHHHHHHHHHccC
Confidence 4568999999988432322 3667899999999998887643
Done!