BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9576
(338 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SY34|SYFA_JANMA Phenylalanine--tRNA ligase alpha subunit OS=Janthinobacterium sp.
(strain Marseille) GN=pheS PE=3 SV=1
Length = 338
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 274/337 (81%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MN L++L+ QA+ DF+ A+ ++LENAK+ YLGK G++T+ +K++ ++ ERK G +I
Sbjct: 1 MNPLEQLVTQAQTDFAAAIDAAALENAKAKYLGKTGQITEQMKSLGKLAPEERKAQGAVI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
NS K I+ L RD L Q++ L IDITLPGRG+ GG+HP+MR+ +R+E+IF
Sbjct: 61 NSAKEKIEAALTARRDALSNAQMEARLNAEAIDITLPGRGRGTGGIHPVMRSWQRVEEIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
SIGFD+ DGPEIE D+ NFTALNSP+NHPARSM DTFYI+ + LLRTHTSPMQ
Sbjct: 121 GSIGFDVADGPEIENDWTNFTALNSPENHPARSMQDTFYIEGKDTQGKPLLLRTHTSPMQ 180
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+RY+++NKPPIKVI GR YR+DSD+THSPMFHQ+EGLWID+NISF+DLKGVYLNF++ F
Sbjct: 181 VRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIDENISFADLKGVYLNFVKAF 240
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEK 300
FE+D++Q+RFRPSYFPFTEPSAEIDI F GPLKG WLE+SGAGQV+P VL NM DPE+
Sbjct: 241 FETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVLRNMGFDPEQ 300
Query: 301 YIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+IGFAFGSGLERLTMLRYGI+DLRLFY+G++ FLKQF
Sbjct: 301 FIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQF 337
>sp|A4G615|SYFA_HERAR Phenylalanine--tRNA ligase alpha subunit OS=Herminiimonas
arsenicoxydans GN=pheS PE=3 SV=1
Length = 338
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 273/337 (81%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MN L +L+IQA+ DF+ A ++LENAK+ YLGK G++T+ +K++ ++ +ERK G +I
Sbjct: 1 MNPLDQLVIQAQTDFAAADDAAALENAKAKYLGKTGQITEQMKSLGKLAPDERKTQGAVI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
NS K I+ L RD L Q++ L IDITLPGRG+ GG+HP+MRT +R+E+IF
Sbjct: 61 NSAKEKIEAALTARRDALSNAQMESRLNAEAIDITLPGRGRGTGGIHPVMRTWQRVEEIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
SIGFD+ DGPEIE D+ NFTALNSP+NHPARSM DTFYI+ LLRTHTSPMQ
Sbjct: 121 GSIGFDVADGPEIENDWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHTSPMQ 180
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+RY+++NKPPI+VI GR YR+DSD+THSPMFHQ+EGLWID+NISF+DLKGVYLNF++ F
Sbjct: 181 VRYARMNKPPIRVIAPGRTYRVDSDATHSPMFHQVEGLWIDENISFADLKGVYLNFVKAF 240
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEK 300
FE+D++Q+RFRPSYFPFTEPSAEIDI F GPLKG WLE+SGAGQV+P V+ NM DPE+
Sbjct: 241 FETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPNVMRNMGFDPEQ 300
Query: 301 YIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+IGFAFGSGLERLTMLRYGI+DLRLFY+G++ FLKQF
Sbjct: 301 FIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQF 337
>sp|Q2SVE2|SYFA_BURTA Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=pheS PE=3 SV=1
Length = 337
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 199/336 (59%), Positives = 255/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEGAADITTLENEKARFLGKSGALTELLKGLGKLDPEARKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ LN R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALNARRQALADALLNQRLAAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFRS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFTALNSP+NHPARSM DTFY+ + + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTALNSPENHPARSMQDTFYVDGKDADGRRLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+N+SF+DLKGVY +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENVSFADLKGVYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEHGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|Q39H51|SYFA_BURS3 Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia sp.
(strain 383) GN=pheS PE=3 SV=1
Length = 345
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 256/336 (76%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 10 DLDQIVADAQQSFEQAADITTLENEKARFLGKSGALTELLKGLGKLDPEARKTEGARINV 69
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
+K ++ L R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 70 VKQQVEAALTARRQALADALLNQRLTAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFGS 129
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFT+LNSP+NHPARSM DTFY++ + + LLRTHTSPMQ+R
Sbjct: 130 IGFDVADGPEIETDWYNFTSLNSPENHPARSMQDTFYVEGKDADGRQLLLRTHTSPMQVR 189
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+NISF+DLKGVY +F++ FFE
Sbjct: 190 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENISFADLKGVYTDFLKKFFE 249
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 250 RDDILVRFRPSYFPFTEPSAEIDMMFEQGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 309
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 310 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 345
>sp|A3NUI8|SYFA_BURP0 Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia
pseudomallei (strain 1106a) GN=pheS PE=3 SV=1
Length = 337
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 199/336 (59%), Positives = 254/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEGAADITTLENEKARFLGKSGALTELLKGLGKLDPETRKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ LN R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALNARRQALADALLNQRLAAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFRS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFTALNSP+NHPARSM DTFY+ + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTALNSPENHPARSMQDTFYVDGKDADGRPLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+N+SF+DLKGVY +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENVSFADLKGVYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEHGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|A4JDU8|SYFA_BURVG Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia
vietnamiensis (strain G4 / LMG 22486) GN=pheS PE=3 SV=1
Length = 337
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 255/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEQAADITTLENEKARFLGKSGALTELLKGLGKLDPEARKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ L R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALTARRQALADALLNQRLAAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFRS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFT+LNSP+NHPARSM DTFY++ + + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTSLNSPENHPARSMQDTFYVEGKDADGRQLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+NISF+DLKGVY +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENISFADLKGVYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEHGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|B4E7I9|SYFA_BURCJ Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia cepacia
(strain J2315 / LMG 16656) GN=pheS PE=3 SV=1
Length = 337
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 255/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEQAADITTLENEKARFLGKSGALTELLKGLGKLDPEARKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ L R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALTARRQALADALLNQRLTAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFGS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFT+LNSP+NHPARSM DTFY++ + + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTSLNSPENHPARSMQDTFYVEGKDADGRQLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+NISF+DLKGVY +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENISFADLKGVYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEQGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|Q63TM6|SYFA_BURPS Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia
pseudomallei (strain K96243) GN=pheS PE=3 SV=1
Length = 337
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 253/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEGAADITTLENEKARFLGKSGALTELLKGLGKLDPETRKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ LN R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALNARRQALADALLNQRLAAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFRS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFTALNSP+NHPARSM DTFY+ + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTALNSPENHPARSMQDTFYVDGKDADGRPLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+N+SF+DLKG Y +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENVSFADLKGAYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEHGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|Q3JT08|SYFA_BURP1 Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia
pseudomallei (strain 1710b) GN=pheS PE=3 SV=1
Length = 337
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 253/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEGAADITTLENEKARFLGKSGALTELLKGLGKLDPETRKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ LN R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALNARRQALADALLNQRLAAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFRS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFTALNSP+NHPARSM DTFY+ + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTALNSPENHPARSMQDTFYVDGKDADGRPLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+N+SF+DLKG Y +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENVSFADLKGAYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEHGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|Q62KI6|SYFA_BURMA Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia mallei
(strain ATCC 23344) GN=pheS PE=3 SV=1
Length = 337
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 253/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEGAADITTLENEKARFLGKSGALTELLKGLGKLDPETRKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ LN R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALNARRQALADALLNQRLAAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFRS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFTALNSP+NHPARSM DTFY+ + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTALNSPENHPARSMQDTFYVDGKDADGRPLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+N+SF+DLKG Y +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENVSFADLKGAYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEHGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|A3MJU2|SYFA_BURM7 Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia mallei
(strain NCTC 10247) GN=pheS PE=3 SV=1
Length = 337
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 253/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F A I++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQQSFEGAADITTLENEKARFLGKSGALTELLKGLGKLDPETRKTEGARINV 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ LN R L L L ID+TLPGRG G LHP+MRT ER+E+IF S
Sbjct: 62 AKQQVEAALNARRQALADALLNQRLAAEAIDVTLPGRGAGAGSLHPVMRTWERVEQIFRS 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFTALNSP+NHPARSM DTFY+ + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTALNSPENHPARSMQDTFYVDGKDADGRPLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y+++N+PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+N+SF+DLKG Y +F++ FFE
Sbjct: 182 YARMNRPPIKVIAPGRTYRVDSDATHSPMFNQVEGLWIDENVSFADLKGAYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDPE+YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMMFEHGKNAGKWLEISGSGQVHPTVIRNMGLDPERYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|B2SZF8|SYFA_BURPP Phenylalanine--tRNA ligase alpha subunit OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=pheS PE=3 SV=1
Length = 337
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 195/336 (58%), Positives = 254/336 (75%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F+ A +++LEN K+ +LGK+G LT+ +K + + RK G IN
Sbjct: 2 DLDQIVADAQKAFAEASDVTTLENEKARFLGKSGALTELLKGLGKLDPETRKSEGARINL 61
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
+K ++ L R L L L ID+TLPGRG G LHP+MRT ER+E+IF +
Sbjct: 62 VKQQVEAALTARRQALADVLLNQRLAAEAIDVTLPGRGTGAGSLHPVMRTWERVEQIFRT 121
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFT+LNSP+NHPARSM DTFY+ + + LLRTHTSPMQ+R
Sbjct: 122 IGFDVADGPEIETDWYNFTSLNSPENHPARSMQDTFYVDGKDADGRQLLLRTHTSPMQVR 181
Query: 183 YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFE 242
Y++ N PPIKVI GR YR+DSD+THSPMF+Q+EGLWID+NISF+DLKGVY +F++ FFE
Sbjct: 182 YARTNTPPIKVIVPGRTYRVDSDATHSPMFNQVEGLWIDENISFADLKGVYTDFLKKFFE 241
Query: 243 SDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYI 302
D+I +RFRPSYFPFTEPSAEID++F+ G G WLEISG+GQV+P V+ NM LDP++YI
Sbjct: 242 RDDILVRFRPSYFPFTEPSAEIDMLFETGKNAGKWLEISGSGQVHPTVIRNMGLDPDRYI 301
Query: 303 GFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
GFAFGSGLERLTMLRYG+ DLRLF++ ++ FL+QF
Sbjct: 302 GFAFGSGLERLTMLRYGVQDLRLFFENDLRFLRQFA 337
>sp|Q7VVR4|SYFA_BORPE Phenylalanine--tRNA ligase alpha subunit OS=Bordetella pertussis
(strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=pheS
PE=3 SV=1
Length = 348
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 196/331 (59%), Positives = 256/331 (77%)
Query: 7 LLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINSIKIN 66
L+ QA+ F+ A ++LENAK+ +LGK G LT +K + + +++ G IN K
Sbjct: 16 LVSQAQERFAAASDAAALENAKARFLGKEGALTVLLKALGKLDPEQKREMGARINQAKQQ 75
Query: 67 IKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYSIGFD 126
I+ LN R L + +L L + ID+TLPGRGK GG+HP++RT ER+E+IF SIGFD
Sbjct: 76 IEALLNARRAALAQAELDARLASETIDVTLPGRGKAAGGIHPVIRTWERVEEIFRSIGFD 135
Query: 127 ITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIRYSKI 186
+ DGPE+E D+ NFTALN+P +HPARSM DTFY+ LLRTHTSPMQ+RY+++
Sbjct: 136 VADGPEVENDWTNFTALNNPLDHPARSMQDTFYVDMHDADGLPLLLRTHTSPMQVRYARM 195
Query: 187 NKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFESDNI 246
+KPPIKVI GR YR+DSD+THSPMFHQ+EGLWI ++ISF+DLKGVY +F+R FFESD++
Sbjct: 196 HKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYTDFLRCFFESDDL 255
Query: 247 QIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYIGFAF 306
+RFRPS+FPFTEPSAEID++F GP +G WLEISG+GQV+P+V+ N LDPE+YIGFAF
Sbjct: 256 VVRFRPSFFPFTEPSAEIDMMFTSGPNRGRWLEISGSGQVHPQVVRNFGLDPERYIGFAF 315
Query: 307 GSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
GSGLERLTMLRYG++DLR FY+G++ FL+QF
Sbjct: 316 GSGLERLTMLRYGVNDLRQFYEGDLRFLRQF 346
>sp|Q7WKR5|SYFA_BORBR Phenylalanine--tRNA ligase alpha subunit OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
GN=pheS PE=3 SV=1
Length = 348
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 196/331 (59%), Positives = 256/331 (77%)
Query: 7 LLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINSIKIN 66
L+ QA+ F+ A ++LENAK+ +LGK G LT +K + + +++ G IN K
Sbjct: 16 LVSQAQERFAAASDAAALENAKARFLGKEGALTVLLKALGKLDPEQKREMGARINQAKQQ 75
Query: 67 IKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYSIGFD 126
I+ LN R L + +L L + ID+TLPGRGK GG+HP++RT ER+E+IF SIGFD
Sbjct: 76 IEALLNARRAALAQAELDARLASETIDVTLPGRGKAAGGIHPVIRTWERVEEIFRSIGFD 135
Query: 127 ITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIRYSKI 186
+ DGPE+E D+ NFTALN+P +HPARSM DTFY+ LLRTHTSPMQ+RY+++
Sbjct: 136 VADGPEVENDWTNFTALNNPLDHPARSMQDTFYVDMHDADGLPLLLRTHTSPMQVRYARM 195
Query: 187 NKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFESDNI 246
+KPPIKVI GR YR+DSD+THSPMFHQ+EGLWI ++ISF+DLKGVY +F+R FFESD++
Sbjct: 196 HKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYTDFLRCFFESDDL 255
Query: 247 QIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYIGFAF 306
+RFRPS+FPFTEPSAEID++F GP +G WLEISG+GQV+P+V+ N LDPE+YIGFAF
Sbjct: 256 VVRFRPSFFPFTEPSAEIDMMFTSGPNRGRWLEISGSGQVHPQVVRNFGLDPERYIGFAF 315
Query: 307 GSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
GSGLERLTMLRYG++DLR FY+G++ FL+QF
Sbjct: 316 GSGLERLTMLRYGVNDLRQFYEGDLRFLRQF 346
>sp|Q7W7C7|SYFA_BORPA Phenylalanine--tRNA ligase alpha subunit OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=pheS PE=3 SV=1
Length = 348
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 195/331 (58%), Positives = 255/331 (77%)
Query: 7 LLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINSIKIN 66
L+ QA+ F+ A ++LENAK+ +LGK G LT +K + + +++ G IN K
Sbjct: 16 LVSQAQERFAAASDAAALENAKARFLGKEGALTVLLKALGKLDPEQKREMGARINQAKQQ 75
Query: 67 IKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYSIGFD 126
I+ LN R L + +L L + ID+TLPGRGK GG+HP++RT ER+E+IF SIGFD
Sbjct: 76 IEALLNARRAALAQAELDARLASETIDVTLPGRGKAAGGIHPVIRTWERVEEIFRSIGFD 135
Query: 127 ITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIRYSKI 186
+ DGPE+E D+ NFTALN+P +HPARSM DTFY+ LLRTHTSPMQ+RY+++
Sbjct: 136 VADGPEVENDWTNFTALNNPLDHPARSMQDTFYVDMHDADGLPLLLRTHTSPMQVRYARM 195
Query: 187 NKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFESDNI 246
+KPPIKVI GR YR+DS +THSPMFHQ+EGLWI ++ISF+DLKGVY +F+R FFESD++
Sbjct: 196 HKPPIKVIAPGRTYRVDSGATHSPMFHQVEGLWIAEDISFADLKGVYTDFLRCFFESDDL 255
Query: 247 QIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYIGFAF 306
+RFRPS+FPFTEPSAEID++F GP +G WLEISG+GQV+P+V+ N LDPE+YIGFAF
Sbjct: 256 VVRFRPSFFPFTEPSAEIDMMFTSGPNRGRWLEISGSGQVHPQVVRNFGLDPERYIGFAF 315
Query: 307 GSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
GSGLERLTMLRYG++DLR FY+G++ FL+QF
Sbjct: 316 GSGLERLTMLRYGVNDLRQFYEGDLRFLRQF 346
>sp|A2SH03|SYFA_METPP Phenylalanine--tRNA ligase alpha subunit OS=Methylibium
petroleiphilum (strain PM1) GN=pheS PE=3 SV=1
Length = 345
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 254/350 (72%), Gaps = 19/350 (5%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M +L+ QA F A + + LE+AK+ +LGK+G+LT +K + ++ ++E+K G I
Sbjct: 1 MEAFSQLVQQAAQAFEKARTPAELEDAKAAFLGKSGELTARMKQLASLPVDEKKARGAEI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N+ K ++ L R + +L L+ +D+TLPGR + GGLHPI R +ERIE IF
Sbjct: 61 NAAKQQVEAALTARRQAMADAELAQQLRAESLDVTLPGRRRGSGGLHPITRAMERIEAIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GF++ DGPEIETD+ NFTALN+P +HPARSMHDTFY++ V LRTHTSPMQ
Sbjct: 121 GSMGFEVADGPEIETDWFNFTALNTPADHPARSMHDTFYVEGGQV------LRTHTSPMQ 174
Query: 181 IRYS-------------KINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFS 227
IR++ + P I+VI GR YR+DSD+THSPMFHQ+EGLW+ +NISF
Sbjct: 175 IRHAVRHVKAHRAALDAGLPMPEIRVIAPGRTYRVDSDATHSPMFHQVEGLWVGQNISFK 234
Query: 228 DLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVN 287
DLK VY++FIR FFE+ ++QIRFRPSYFPFTEPSAEID++F GPLKG WLE+SG+GQV+
Sbjct: 235 DLKSVYVSFIRAFFETSDLQIRFRPSYFPFTEPSAEIDMMFGSGPLKGRWLEVSGSGQVH 294
Query: 288 PKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
P+V+ NM LDPE+YIGFAFGSG++RL MLRYG+ DLRLF+ G++ FL QF
Sbjct: 295 PQVIRNMGLDPERYIGFAFGSGIDRLAMLRYGVSDLRLFFDGDLRFLSQF 344
>sp|A1TR35|SYFA_ACIAC Phenylalanine--tRNA ligase alpha subunit OS=Acidovorax citrulli
(strain AAC00-1) GN=pheS PE=3 SV=1
Length = 350
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 256/350 (73%), Gaps = 14/350 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MNEL L+ A+ F+ A + + LENAK+ +LGK G++T+ +K + + + E+K G +
Sbjct: 1 MNELDSLVDAARRMFADAATPTDLENAKAQFLGKAGRVTELLKGLAQLPVEEKKSRGAAV 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I++ LN R L +L+ L+ +D+TLPGR + +GGLHP+ TLERIE IF
Sbjct: 61 NVAKQAIEQALNERRQALADAELQAQLQAEALDVTLPGRQRGQGGLHPVSLTLERIEGIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GFD+ DGPEIE+D+ NFTALN+P++HPARSMHDTFY++ S LLRTHTSPMQ
Sbjct: 121 GSMGFDVADGPEIESDWFNFTALNTPEDHPARSMHDTFYVEGGTASAPL-LLRTHTSPMQ 179
Query: 181 IRYS--KINK-----------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFS 227
IR++ + K P I+VI GR YR+DSD+THSPMFHQ EGLWI +N+SF
Sbjct: 180 IRHAVQHVKKHRALLDAGQPMPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWIGENVSFK 239
Query: 228 DLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVN 287
DLK V+ F R FFESD++ +RFRPS+FPFTEPSAEIDI FQDGPL G WLE++G+GQV+
Sbjct: 240 DLKVVFTAFCRTFFESDDLVLRFRPSFFPFTEPSAEIDIQFQDGPLAGRWLEVAGSGQVH 299
Query: 288 PKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
P V+ NM LDPEKYIGFAFG G +RLTMLRYG++DLRLF+ G+I FL QF
Sbjct: 300 PNVVRNMGLDPEKYIGFAFGMGPDRLTMLRYGVNDLRLFFDGDIRFLSQF 349
>sp|A1WMG9|SYFA_VEREI Phenylalanine--tRNA ligase alpha subunit OS=Verminephrobacter
eiseniae (strain EF01-2) GN=pheS PE=3 SV=1
Length = 350
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/350 (56%), Positives = 255/350 (72%), Gaps = 14/350 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MNEL L+ A+ F+ + S + LENAK+ +LGK+G++T+ +K + + + E+K G I
Sbjct: 1 MNELDSLVESARQRFAQSTSPADLENAKAQFLGKSGRVTELMKGMAQLCVAEKKTRGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I+ LN R L QL+ L + +D++LPGR + +GGLHP+ TLERIE +F
Sbjct: 61 NLAKQAIEAALNARRQALADAQLQQQLTADALDVSLPGRQRGQGGLHPVSLTLERIEGLF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GFD+ DGPEIETD+ NFTALN+P++HPARSMHDTFY++ + LLRTHTSPMQ
Sbjct: 121 GSMGFDVADGPEIETDWFNFTALNTPEDHPARSMHDTFYVEG-GTAGAPNLLRTHTSPMQ 179
Query: 181 IRYS----KINK---------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFS 227
IR++ K ++ P I+VI GR YRIDSD+THSPMFHQ EGLWI +N+ F
Sbjct: 180 IRHAVQHVKAHRAALDAGQPMPEIRVIAPGRAYRIDSDATHSPMFHQCEGLWIGENVGFK 239
Query: 228 DLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVN 287
DLK ++ F R FFESD++ +RFRPS+FPFTEPSAEIDI FQ GPL G WLE++G+GQV+
Sbjct: 240 DLKVIFTGFCRRFFESDDLVLRFRPSFFPFTEPSAEIDIRFQTGPLAGRWLEVAGSGQVH 299
Query: 288 PKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
P V+ NM LDPEKYIGFAFG GL+RLTMLRYG+ DLRLF+ G+I FL QF
Sbjct: 300 PNVVRNMGLDPEKYIGFAFGMGLDRLTMLRYGVSDLRLFFDGDIRFLSQF 349
>sp|A1W8I2|SYFA_ACISJ Phenylalanine--tRNA ligase alpha subunit OS=Acidovorax sp. (strain
JS42) GN=pheS PE=3 SV=1
Length = 350
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/350 (55%), Positives = 255/350 (72%), Gaps = 14/350 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MNEL L+ A+ F+ + + + LENAK+ +LGK+G+LT+ +K + +S E+K G I
Sbjct: 1 MNELDSLVTSARESFARSATPAELENAKAQFLGKSGRLTELMKGMAQLSPEEKKTRGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K ++ L R L +L+ LK +D+TLPGR + +GGLHP+ TLERIE+IF
Sbjct: 61 NVAKQAVEAALAARRQELADAELQAQLKAEALDVTLPGRQRGRGGLHPVSLTLERIERIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GF++ DGPEIETD+ NFTALN+P++HPARSMHDTFY++ LLRTHTSPMQ
Sbjct: 121 GSMGFEVADGPEIETDWFNFTALNTPEDHPARSMHDTFYVEG-GTPEAPNLLRTHTSPMQ 179
Query: 181 IRYS--KINK-----------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFS 227
+RY+ + K P I+VI GR YR+DSD+THSPMFHQ EGLWI +N+SF
Sbjct: 180 VRYAVQHVKKHRGLIDAGQAMPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWIGENVSFK 239
Query: 228 DLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVN 287
DLK V+ +F + FFESD++ +RFRPS+FPFTEPSAEIDI FQ GPL G WLE++G+GQV+
Sbjct: 240 DLKVVFTDFCKTFFESDDLVLRFRPSFFPFTEPSAEIDIQFQSGPLAGKWLEVAGSGQVH 299
Query: 288 PKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
P V+ NM LDPE++IGFAFG G +RLTMLRYG++DLRLF+ G+I FL QF
Sbjct: 300 PNVVRNMGLDPERFIGFAFGMGPDRLTMLRYGVNDLRLFFDGDIRFLSQF 349
>sp|B9MHY2|SYFA_ACIET Phenylalanine--tRNA ligase alpha subunit OS=Acidovorax ebreus
(strain TPSY) GN=pheS PE=3 SV=1
Length = 350
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/350 (55%), Positives = 255/350 (72%), Gaps = 14/350 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MNEL L+ A+ F+ + + + LENAK+ +LGK+G+LT+ +K + +S E+K G I
Sbjct: 1 MNELDSLVTSARESFARSATPAELENAKAQFLGKSGRLTELMKGMAQLSPEEKKTRGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K ++ L R L +L+ LK +D+TLPGR + +GGLHP+ TLERIE+IF
Sbjct: 61 NVAKQAVEAALAARRQELADAELQAQLKAEALDVTLPGRQRGRGGLHPVSLTLERIERIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GF++ DGPEIETD+ NFTALN+P++HPARSMHDTFY++ LLRTHTSPMQ
Sbjct: 121 GSMGFEVADGPEIETDWFNFTALNTPEDHPARSMHDTFYVEG-GTPEAPNLLRTHTSPMQ 179
Query: 181 IRYS--KINK-----------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFS 227
+RY+ + K P I+VI GR YR+DSD+THSPMFHQ EGLWI +N+SF
Sbjct: 180 VRYAVQHVKKHRGLIDAGQAMPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWIGENVSFK 239
Query: 228 DLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVN 287
DLK V+ +F + FFESD++ +RFRPS+FPFTEPSAEIDI FQ GPL G WLE++G+GQV+
Sbjct: 240 DLKVVFTDFCKTFFESDDLVLRFRPSFFPFTEPSAEIDIQFQSGPLAGKWLEVAGSGQVH 299
Query: 288 PKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
P V+ NM LDPE++IGFAFG G +RLTMLRYG++DLRLF+ G+I FL QF
Sbjct: 300 PNVVRNMGLDPERFIGFAFGMGPDRLTMLRYGVNDLRLFFDGDIRFLSQF 349
>sp|Q8XZ25|SYFA_RALSO Phenylalanine--tRNA ligase alpha subunit OS=Ralstonia solanacearum
(strain GMI1000) GN=pheS PE=3 SV=1
Length = 344
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 250/345 (72%), Gaps = 13/345 (3%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L +++ A+ F++ +SLEN K+ +LGK+G LT +K + + RK G IN
Sbjct: 4 DLDQVVADAQTAFASVEDNASLENEKARFLGKSGVLTDLLKGLGKLDPQTRKSEGARINL 63
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K ++ LN R L + L ID+TLPGR +G LHP+M T ER+ +IF S
Sbjct: 64 AKSRVEAALNDRRQALADALMNARLAAEAIDVTLPGRDVAEGSLHPVMNTWERVAQIFGS 123
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIETD+ NFTALN+P NHPARSM DTFYI R + LLRTHTSPMQ+R
Sbjct: 124 IGFDVADGPEIETDWMNFTALNNPDNHPARSMQDTFYIDGRDSDDKLLLLRTHTSPMQVR 183
Query: 183 YSKINK---------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVY 233
Y++++ PPIKVI GR YR+DSD+THSPMFHQ+EGLWI NISF+DLKGVY
Sbjct: 184 YARMHVEKYKHLDRIPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIADNISFADLKGVY 243
Query: 234 LNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCN 293
+F+R FFESD+IQ+RFRPSYFPFTEPSAEID+ F + G WLEISG+GQV+P V+ N
Sbjct: 244 TDFLRKFFESDDIQVRFRPSYFPFTEPSAEIDMAFGN----GRWLEISGSGQVHPTVVRN 299
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
M LDPE+YIGFAFGSGLERLTMLRYGI+DLRLF++G++ FL+QF
Sbjct: 300 MGLDPERYIGFAFGSGLERLTMLRYGINDLRLFFEGDVRFLRQFA 344
>sp|A9C3D0|SYFA_DELAS Phenylalanine--tRNA ligase alpha subunit OS=Delftia acidovorans
(strain DSM 14801 / SPH-1) GN=pheS PE=3 SV=1
Length = 350
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/351 (56%), Positives = 257/351 (73%), Gaps = 16/351 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MNEL L+ A+ F+ A + + LENAK+ +LGK+GK+T+ +K + +S+ E+K G I
Sbjct: 1 MNELDSLVESAQQLFAQAQTPADLENAKAQFLGKSGKVTELMKGMAQLSVEEKKSRGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I+ L R L +L+ LK +D+TLPGR + +GGLHP+ TLERIE IF
Sbjct: 61 NVAKQGIEAALTARRKALADAELQAHLKAEVLDVTLPGRRRGQGGLHPVSLTLERIEGIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKP-LLRTHTSPM 179
S+GFD+ +GPEIE+D+ NFTALN+P++HPARSMHDTFY++ + P LLRTHTSPM
Sbjct: 121 GSMGFDVAEGPEIESDWFNFTALNTPEDHPARSMHDTFYVEGG--TEQAPNLLRTHTSPM 178
Query: 180 QIRYS--KINK-----------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISF 226
Q+R++ + K P I+VI GR YR+DSD+THSPMFHQ EGLWI +N+SF
Sbjct: 179 QVRHAVQHVKKYRERLDAGQGMPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWIGENVSF 238
Query: 227 SDLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQV 286
DLK V+ +F + FFESD++ +RFRPS+FPFTEPSAEIDI FQ GPL G WLE++G+GQV
Sbjct: 239 KDLKVVFTDFCKTFFESDDLVLRFRPSFFPFTEPSAEIDIQFQSGPLAGRWLEVAGSGQV 298
Query: 287 NPKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+P V+ NM LDPEKYIGFAFG G +RLTMLRYG++DLRLF+ G+I FL QF
Sbjct: 299 HPNVVRNMGLDPEKYIGFAFGMGPDRLTMLRYGVNDLRLFFDGDIRFLSQF 349
>sp|Q472N4|SYFA_CUPPJ Phenylalanine--tRNA ligase alpha subunit OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=pheS PE=3
SV=1
Length = 354
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 242/324 (74%), Gaps = 12/324 (3%)
Query: 23 SLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINSIKINIKKELNIHRDILKKKQ 82
+LEN K+ +LGK G LT+ +K + + RK G IN +K ++ L R L
Sbjct: 35 TLENEKARFLGKTGALTELLKGLGKLDPETRKTEGARINQVKQQVEAALTARRQALADAL 94
Query: 83 LKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYSIGFDITDGPEIETDFNNFTA 142
+ L ID+TLPGR ++G LHP+MRT ER+E+IF SIGFD+ DGPEIETD+ NFTA
Sbjct: 95 MNARLSAEAIDVTLPGRAVSRGSLHPVMRTWERVEQIFGSIGFDVADGPEIETDWMNFTA 154
Query: 143 LNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIRYSKIN--------KPPIKVI 194
LN+P NHPARSM DTFYI R + LLRTHTSPMQ+RY+K++ PPIKVI
Sbjct: 155 LNNPDNHPARSMQDTFYIDGRDSDDKLLLLRTHTSPMQVRYAKMHVEKYAGKAMPPIKVI 214
Query: 195 TSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFESDNIQIRFRPSY 254
GR YR+DSD+THSPMF+Q+EGLWI +++SF+DLKGVY +F+R FFE D+IQ+RFRPSY
Sbjct: 215 CPGRTYRVDSDATHSPMFNQVEGLWIGEDVSFADLKGVYTDFLRKFFERDDIQVRFRPSY 274
Query: 255 FPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYIGFAFGSGLERLT 314
FPFTEPSAEID+ F + G WLEISG+GQV+P VL NM LDPE+YIGFAFGSGLERLT
Sbjct: 275 FPFTEPSAEIDMAFGN----GKWLEISGSGQVHPNVLRNMGLDPERYIGFAFGSGLERLT 330
Query: 315 MLRYGIDDLRLFYKGNINFLKQFT 338
MLRYGI+DLRLF++G++ FL+QF
Sbjct: 331 MLRYGINDLRLFFEGDVRFLRQFA 354
>sp|Q0KBY9|SYFA_CUPNH Phenylalanine--tRNA ligase alpha subunit OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=pheS PE=3 SV=1
Length = 343
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 242/324 (74%), Gaps = 12/324 (3%)
Query: 23 SLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINSIKINIKKELNIHRDILKKKQ 82
+LEN K+ +LGK G LT+ +K + + RK G IN IK ++ L R L
Sbjct: 24 TLENEKARFLGKTGALTELLKGLGKLDPETRKTEGARINQIKQQVEAALQARRQALADAL 83
Query: 83 LKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYSIGFDITDGPEIETDFNNFTA 142
+ L ID+TLPGR ++G LHP+MRT ER+E+IF SIGFD+ DGPEIETD+ NFTA
Sbjct: 84 MNARLAAEAIDVTLPGRAVSRGSLHPVMRTWERVEQIFGSIGFDVADGPEIETDWMNFTA 143
Query: 143 LNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIRYSKIN--------KPPIKVI 194
LN+P NHPARSM DTFY+ R + LLRTHTSPMQ+RY+K++ PPIKVI
Sbjct: 144 LNNPDNHPARSMQDTFYVDGRDSEDKLLLLRTHTSPMQVRYAKMHVEKYAGKAMPPIKVI 203
Query: 195 TSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFESDNIQIRFRPSY 254
GR YR+DSD+THSPMF+Q+EGLWI +++SF+DLKGVY +F+R FFE D+IQ+RFRPSY
Sbjct: 204 CPGRTYRVDSDATHSPMFNQVEGLWIGEDVSFADLKGVYTDFLRKFFERDDIQVRFRPSY 263
Query: 255 FPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYIGFAFGSGLERLT 314
FPFTEPSAEID+ F + G WLEISG+GQV+P VL NM LDPE+YIGFAFGSGLERLT
Sbjct: 264 FPFTEPSAEIDMAFGN----GKWLEISGSGQVHPNVLRNMGLDPERYIGFAFGSGLERLT 319
Query: 315 MLRYGIDDLRLFYKGNINFLKQFT 338
MLRYGI+DLRLF++G++ FL+QF
Sbjct: 320 MLRYGINDLRLFFEGDVRFLRQFA 343
>sp|B2UGJ4|SYFA_RALPJ Phenylalanine--tRNA ligase alpha subunit OS=Ralstonia pickettii
(strain 12J) GN=pheS PE=3 SV=1
Length = 344
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 250/345 (72%), Gaps = 13/345 (3%)
Query: 3 ELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINS 62
+L ++++ A+ F++ +SLEN K+ +LGK+G LT +K + + RK G IN
Sbjct: 4 DLDQVVVDAQNAFASVEDNASLENEKARFLGKSGVLTDLLKGLGKLDPETRKTEGARINQ 63
Query: 63 IKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYS 122
K +++ L R L + L ID+TLPGR +G LHP+M T ER+ KIF S
Sbjct: 64 AKSRVEEALTARRQALADALMNARLAAEAIDVTLPGRDVAEGSLHPVMNTWERVAKIFGS 123
Query: 123 IGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIR 182
IGFD+ DGPEIE+D+ NFTALN+P NHPARSM DTFYI R + LLRTHTSPMQ+R
Sbjct: 124 IGFDVADGPEIESDWMNFTALNNPDNHPARSMQDTFYIDGRDSEDKLLLLRTHTSPMQVR 183
Query: 183 YSKINK---------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVY 233
Y++++ PPIKVI GR YR+DSD+THSPMFHQ+EGLWI NISF+DLKGVY
Sbjct: 184 YARMHVEKYKHLDRIPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIADNISFADLKGVY 243
Query: 234 LNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCN 293
+F+R FFE D+IQ+RFRPSYFPFTEPSAEID+ F + G WLEISG+GQV+P V+ N
Sbjct: 244 TDFLRNFFERDDIQVRFRPSYFPFTEPSAEIDMAFGN----GKWLEISGSGQVHPTVVRN 299
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
M LDPE+YIGFAFGSGLERLTMLRYGI+DLRLF++G++ FL+QF
Sbjct: 300 MGLDPERYIGFAFGSGLERLTMLRYGINDLRLFFEGDVRFLRQFA 344
>sp|B3R4J5|SYFA_CUPTR Phenylalanine--tRNA ligase alpha subunit OS=Cupriavidus taiwanensis
(strain R1 / LMG 19424) GN=pheS PE=3 SV=1
Length = 343
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 241/324 (74%), Gaps = 12/324 (3%)
Query: 23 SLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINSIKINIKKELNIHRDILKKKQ 82
+LEN K+ +LGK G LT+ +K + + RK G IN +K ++ L R L
Sbjct: 24 TLENEKARFLGKTGALTELLKGLGKLDPETRKSEGARINQVKQQVEAALQARRQALADAL 83
Query: 83 LKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYSIGFDITDGPEIETDFNNFTA 142
+ L ID+TLPGR +G LHP+MRT ER+E+IF SIGFD+ DGPEIETD+ NFTA
Sbjct: 84 MNARLAAEAIDVTLPGRAVARGSLHPVMRTWERVEQIFGSIGFDVADGPEIETDWMNFTA 143
Query: 143 LNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIRYSKIN--------KPPIKVI 194
LN+P NHPARSM DTFY+ R + LLRTHTSPMQ+RY++++ PPIKVI
Sbjct: 144 LNNPDNHPARSMQDTFYVDGRDSEDKLLLLRTHTSPMQVRYARMHVEKYAGKAMPPIKVI 203
Query: 195 TSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFESDNIQIRFRPSY 254
GR YR+DSD+THSPMF+Q+EGLWI +++SF+DLKGVY +F+R FFE D+IQ+RFRPSY
Sbjct: 204 CPGRTYRVDSDATHSPMFNQVEGLWIGEDVSFADLKGVYTDFLRKFFERDDIQVRFRPSY 263
Query: 255 FPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYIGFAFGSGLERLT 314
FPFTEPSAEID+ F + G WLEISG+GQV+P VL NM LDPE+YIGFAFGSGLERLT
Sbjct: 264 FPFTEPSAEIDMAFGN----GKWLEISGSGQVHPNVLRNMGLDPERYIGFAFGSGLERLT 319
Query: 315 MLRYGIDDLRLFYKGNINFLKQFT 338
MLRYGI+DLRLF++G++ FL+QF
Sbjct: 320 MLRYGINDLRLFFEGDVRFLRQFA 343
>sp|Q1LP76|SYFA_RALME Phenylalanine--tRNA ligase alpha subunit OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=pheS PE=3 SV=1
Length = 343
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 241/324 (74%), Gaps = 12/324 (3%)
Query: 23 SLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEIINSIKINIKKELNIHRDILKKKQ 82
+LEN K+ +LGK G LT+ +K + + + RK G IN +K ++ L R L
Sbjct: 24 TLENEKARFLGKTGALTELLKGLGKLDPDARKTEGARINQVKQQVEAALQARRQALADAL 83
Query: 83 LKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIFYSIGFDITDGPEIETDFNNFTA 142
+ L ID+TLPGR +G +HP+MRT ER+E+IF SIGFD+ DGPEIETD+ NFTA
Sbjct: 84 MNARLAAEAIDVTLPGRSVARGSVHPVMRTWERVEQIFGSIGFDVADGPEIETDWMNFTA 143
Query: 143 LNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQIRYSKIN--------KPPIKVI 194
LN+P NHPARSM DTFY+ R + LLRTHTSPMQ+RY++++ PPIKVI
Sbjct: 144 LNNPDNHPARSMQDTFYVDGRDSDDKLLLLRTHTSPMQVRYARMHVEKYAGRAMPPIKVI 203
Query: 195 TSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVFFESDNIQIRFRPSY 254
GR YR+DSD+THSPMF+Q+EGLWI N+SF+DLKGVY +F+R FFE D+IQ+RFRPSY
Sbjct: 204 CPGRTYRVDSDATHSPMFNQVEGLWIGDNVSFADLKGVYTDFLRKFFERDDIQVRFRPSY 263
Query: 255 FPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEKYIGFAFGSGLERLT 314
FPFTEPSAEID+ F + G WLEISG+GQV+P VL NM LDPE+YIGFAFGSGLERLT
Sbjct: 264 FPFTEPSAEIDMAFGN----GKWLEISGSGQVHPNVLRNMGLDPERYIGFAFGSGLERLT 319
Query: 315 MLRYGIDDLRLFYKGNINFLKQFT 338
MLRYGI+DLRLF++G++ FL+QF
Sbjct: 320 MLRYGINDLRLFFEGDVRFLRQFA 343
>sp|B1XYZ7|SYFA_LEPCP Phenylalanine--tRNA ligase alpha subunit OS=Leptothrix cholodnii
(strain ATCC 51168 / LMG 8142 / SP-6) GN=pheS PE=3 SV=1
Length = 347
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 255/346 (73%), Gaps = 9/346 (2%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MN+L L+ A+ DF+ A + + LE+AK+ +LGK G++T+ +K + ++ +E+K G I
Sbjct: 1 MNDLDTLVSAAQADFAAATTPAQLEDAKARFLGKTGRVTELLKGMAALTPDEKKTRGASI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I+ L R L + +L+ LK +D+TLPGR + GGLHP+ RTLERIE+IF
Sbjct: 61 NETKQRIEAALTARRQALAEAELQAQLKAEALDVTLPGRQRGVGGLHPVSRTLERIEQIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GFD+ DGPEIETD+ +FTALN+P+NHPARSM DTFY+ + LR HTSPMQ
Sbjct: 121 GSMGFDVADGPEIETDWYSFTALNNPENHPARSMQDTFYVDMNDEAGRPLCLRPHTSPMQ 180
Query: 181 IRYSKINK---------PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKG 231
+RY++ + P I+VI GR YR+DSD+THSPMFHQ EGLWI +N+SF DLK
Sbjct: 181 VRYARQHAALHAGKDTLPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWIGENVSFKDLKS 240
Query: 232 VYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVL 291
V+ +F R FFE+D++++RFRPS+FPFTEPSAE+DI F GPLKG WLE++G+GQV+P V+
Sbjct: 241 VFTDFFRTFFETDDLELRFRPSFFPFTEPSAEVDIAFASGPLKGRWLEVAGSGQVHPNVV 300
Query: 292 CNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
N LDPE+YIGFAFG G +RLTMLRYG++DLRLF++G++ FL QF
Sbjct: 301 RNFGLDPERYIGFAFGMGPDRLTMLRYGVNDLRLFFEGDLRFLSQF 346
>sp|Q21YS9|SYFA_RHOFD Phenylalanine--tRNA ligase alpha subunit OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=pheS PE=3 SV=1
Length = 357
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/357 (53%), Positives = 253/357 (70%), Gaps = 21/357 (5%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MNEL ++ AK F A + + LENAK+ +LGK+G++T+ +K + ++++E+K G I
Sbjct: 1 MNELNSVVDSAKAAFEQARTPADLENAKALFLGKSGRITELMKGMAALAVDEKKTRGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I+ LN R L +L+ L+ +D+TLPGR + +G LHP+ TLERIE IF
Sbjct: 61 NLAKQAIEVALNNRRQALADAELQAQLQAEALDVTLPGRQRGQGSLHPVSLTLERIEAIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GFD+ GPEIE+D+ NFTALN+P++HPARSMHDTFY++ + LLRTH+SPMQ
Sbjct: 121 GSMGFDVAQGPEIESDWFNFTALNTPEDHPARSMHDTFYVEGGTATAPN-LLRTHSSPMQ 179
Query: 181 IRYS--------------------KINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWI 220
IRY+ + P I+VI GR YR+DSD+THSPMFHQ EGLW+
Sbjct: 180 IRYAVQHVKRHRAAVGVGQVEGLFSGDMPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWV 239
Query: 221 DKNISFSDLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEI 280
+N+SF DLK V+ +F R FFESD++ +RFRPS+FPFTEPSAEIDI FQ GPL G WLE+
Sbjct: 240 GENVSFKDLKFVFTDFCRTFFESDDLVLRFRPSFFPFTEPSAEIDIQFQSGPLAGRWLEV 299
Query: 281 SGAGQVNPKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+G+GQV+P V+ NM L+PEKYIGFAFG G +RL MLRYG++DLRLF+ G++ FL QF
Sbjct: 300 AGSGQVHPNVIRNMGLEPEKYIGFAFGMGPDRLAMLRYGVNDLRLFFDGDVRFLSQF 356
>sp|Q47CM8|SYFA_DECAR Phenylalanine--tRNA ligase alpha subunit OS=Dechloromonas aromatica
(strain RCB) GN=pheS PE=3 SV=1
Length = 348
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 252/347 (72%), Gaps = 10/347 (2%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L +++ +A++ F+ +LE K+ +LGK+G++T+ +K + + E+K G I
Sbjct: 1 MENLDQIVSEAQVAFAAISDPDALEQVKARFLGKSGQITELLKGLGKLPPEEKKTAGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K ++ LN R+ ++K L L +D+TLPGR + +GGLHP+ RTLERIE +F
Sbjct: 61 NVAKTAVETALNERREAIRKAALDARLAEEALDVTLPGRAEARGGLHPVTRTLERIESLF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVS-NNKPLLRTHTSPM 179
SIGF++ DGPEIE DF NFTA+N+P++HPARSMHDTFY++N + +K LLRTHTSP+
Sbjct: 121 ASIGFEVADGPEIEEDFYNFTAMNTPEDHPARSMHDTFYLQNSDGTLADKVLLRTHTSPI 180
Query: 180 QIRYSKIN---------KPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLK 230
Q RY + + P I++I GRVYR+DSD+THSPMFHQ+EGLW+ + +SF+DLK
Sbjct: 181 QARYMQAHVKRYGQLGKMPEIRIIAPGRVYRVDSDATHSPMFHQVEGLWVGEGVSFADLK 240
Query: 231 GVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKV 290
GV NF++ FFE+D++ +RFRPS+FPFTEPSAEID+ F G LKG WLEI+G G V+P V
Sbjct: 241 GVIANFLKSFFETDDLTVRFRPSFFPFTEPSAEIDVAFMSGALKGRWLEIAGCGMVHPNV 300
Query: 291 LCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
L +DPEKY GFAFG G +RLTMLRYGI+DLRLF++G++ FL+QF
Sbjct: 301 LRIAGIDPEKYTGFAFGFGQDRLTMLRYGINDLRLFFEGDLRFLRQF 347
>sp|A1K4E5|SYFA_AZOSB Phenylalanine--tRNA ligase alpha subunit OS=Azoarcus sp. (strain
BH72) GN=pheS PE=3 SV=1
Length = 343
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 249/346 (71%), Gaps = 13/346 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M+ L +L+ QA+ DF+ + LE AK+ YLGK+G LT+ +K + + E++ G I
Sbjct: 1 MDNLDQLVQQAQADFAGVSDSAQLEQAKARYLGKSGALTEQLKGLGKLPPEEKREAGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I+ L R+ L++ L L +D+TLPGRG GGLHP+ RTLERIE +F
Sbjct: 61 NRAKTAIEAALEARRNALREAALLAQLAAEALDVTLPGRGAQGGGLHPVSRTLERIEMLF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
SIGF + DGPEIETD++NFTALN+P+NHPARSMHDTFY++ R + LLRTHTSP+Q
Sbjct: 121 RSIGFIVADGPEIETDWHNFTALNTPENHPARSMHDTFYLEGR----DDVLLRTHTSPVQ 176
Query: 181 IR---------YSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKG 231
IR P I+VI GRVYR+DSD+THSPMFHQ+EGLW+ + +SF+DLKG
Sbjct: 177 IRTMLAHVKRHAEAAAMPEIRVIIPGRVYRVDSDATHSPMFHQVEGLWVGEKVSFADLKG 236
Query: 232 VYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVL 291
V +F+R FFE++++Q+RFRPS+FPFTEPSAEID+ F GPLKG WLEI+G G V+P VL
Sbjct: 237 VIADFLRKFFETEDLQVRFRPSFFPFTEPSAEIDVAFMSGPLKGRWLEIAGCGMVHPNVL 296
Query: 292 CNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE+Y GFAFG G +RLTMLRYG++DLRLF++G++ FL QF
Sbjct: 297 RFGGVDPERYTGFAFGMGPDRLTMLRYGVNDLRLFFEGDLRFLSQF 342
>sp|Q5P7X9|SYFA_AROAE Phenylalanine--tRNA ligase alpha subunit OS=Aromatoleum aromaticum
(strain EbN1) GN=pheS PE=3 SV=1
Length = 343
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/346 (54%), Positives = 249/346 (71%), Gaps = 13/346 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M++L +L+ QA +F+ A LE AK+ YLGK G LT+ +K + ++ ER+ G I
Sbjct: 1 MDKLDQLVQQAAAEFAAAADGVQLEQAKARYLGKTGALTERLKGLGKLAAEERRVAGAEI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I+ L R L++ L L +D+TLPGRG +GGLHP+ RTLERIE +F
Sbjct: 61 NRAKDAIEAALEARRQALREAVLVAQLAAEALDVTLPGRGAAQGGLHPVSRTLERIEALF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
SIGF + DGPE+ETD++NFTALN+P+NHPARSMHDTFY++ + LLRTHTSP+Q
Sbjct: 121 RSIGFVVADGPEVETDWHNFTALNTPENHPARSMHDTFYLEG----HEDVLLRTHTSPVQ 176
Query: 181 IRY---------SKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKG 231
IR + + P I+VI GRVYR+DSD+THSPMFHQ+EGLW+ +++SF+DLKG
Sbjct: 177 IRTMLDHVARYGDRESMPEIRVIVPGRVYRVDSDATHSPMFHQVEGLWVGESVSFADLKG 236
Query: 232 VYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVL 291
V +F+R FFE++ +Q+RFRPS+FPFTEPSAEID+ F G LKG WLEI+G G V+P VL
Sbjct: 237 VIADFLRKFFETEELQVRFRPSFFPFTEPSAEIDVAFMSGALKGRWLEIAGCGMVHPNVL 296
Query: 292 CNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE+Y GFAFG G +RLTMLRYG++DLRLF++G++ FL QF
Sbjct: 297 RFGGIDPERYTGFAFGMGPDRLTMLRYGVNDLRLFFEGDLRFLSQF 342
>sp|C5CUU6|SYFA_VARPS Phenylalanine--tRNA ligase alpha subunit OS=Variovorax paradoxus
(strain S110) GN=pheS PE=3 SV=1
Length = 358
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 252/357 (70%), Gaps = 20/357 (5%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MNEL L+ A+ F+ A + + LENAK+ +LGK+G++T+ +K + +S++E+K G I
Sbjct: 1 MNELDSLVATARAAFAEAKTPAELENAKAQFLGKSGRITELMKGMAALSVDEKKSRGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K I+ L R L ++L + L+ +D++LPGR + GGLHP+ RTLERIE+IF
Sbjct: 61 NVAKQAIEAALTERRQQLADEELSLQLRAEALDVSLPGRRRIPGGLHPVSRTLERIEEIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GFD+ DGPEIE+D+++FT+LN+P NHPARSM DTFY+ LR HTSPMQ
Sbjct: 121 SSMGFDVADGPEIESDWHSFTSLNNPPNHPARSMQDTFYVDLNGDDGIPYNLRPHTSPMQ 180
Query: 181 IRYSK--------------------INKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWI 220
+RY+ + P I+VI GR YR+DSD+THSPMFHQ EGLW+
Sbjct: 181 VRYAHQHIKKYAAEFAAAAADATGTVKAPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWL 240
Query: 221 DKNISFSDLKGVYLNFIRVFFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEI 280
+N+SF DLK V+ +F R FFESD++ +RFRPS+FPFTEPSAEIDI F GPL G WLE+
Sbjct: 241 GENVSFKDLKVVFTDFCRTFFESDDLVLRFRPSFFPFTEPSAEIDIQFASGPLAGRWLEV 300
Query: 281 SGAGQVNPKVLCNMNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+G+GQV+P V+ NM LDPE+YIGFAFG G +RLTMLRYG++DLRLF+ G++ FL QF
Sbjct: 301 AGSGQVHPNVVRNMGLDPERYIGFAFGMGPDRLTMLRYGVNDLRLFFDGDLRFLSQF 357
>sp|Q1GZS1|SYFA_METFK Phenylalanine--tRNA ligase alpha subunit OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=pheS
PE=3 SV=1
Length = 327
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 175/338 (51%), Positives = 249/338 (73%), Gaps = 11/338 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L ++ +A+ DF++ SI+ LE AK+ YLGK+G LT+ +K + +S ER G I
Sbjct: 1 MQNLDHIISEAQQDFASCASIADLEQAKARYLGKSGSLTEALKGLGKLSAEERPAAGAAI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N +K ++ L RD + + + + L + ID+TLP R + GGLHP+ TL R+E++F
Sbjct: 61 NVVKQQVEAALKQRRDAILQAEQERQLASETIDVTLPARTRGTGGLHPVSLTLRRVEELF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
SIGF++ +GPEIE+DF NFTALN P++HPAR+MHDTFY+ +++V LRTHTSP+Q
Sbjct: 121 RSIGFEVAEGPEIESDFYNFTALNIPEDHPARAMHDTFYVDDKHV------LRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+ Y + PP+K+I GRVYR+DSD+THSPMFHQ+EGLW+D++ISF++LKGV +F++ F
Sbjct: 175 VHYMQDKAPPLKIIAPGRVYRVDSDATHSPMFHQVEGLWVDEHISFANLKGVVQDFLQRF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEK 300
FE D++Q+RFRPS+FPFTEPSAE+D+ + G WLEI G G V+P+V ++ +D E+
Sbjct: 235 FERDDLQVRFRPSFFPFTEPSAEMDMSW-----NGGWLEIGGCGMVHPEVFRHVGIDSEQ 289
Query: 301 YIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
Y GFAFG G+ERLTMLRYG++DLRLF++ ++ FLKQF
Sbjct: 290 YRGFAFGLGVERLTMLRYGVNDLRLFFENDLRFLKQFA 327
>sp|C1DDA2|SYFA_LARHH Phenylalanine--tRNA ligase alpha subunit OS=Laribacter
hongkongensis (strain HLHK9) GN=pheS PE=3 SV=1
Length = 327
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 173/337 (51%), Positives = 235/337 (69%), Gaps = 11/337 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M+ + LL + + ++ LE K+ YLGK G++T+ +K + + E+K G I
Sbjct: 1 MSHVDTLLAEGLAAIAAVQDLNELEQVKARYLGKTGQITELLKQLGKLPPEEKKAAGATI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + N RD L +L+ L +D+TLPGRG GGLHP+ TLERI +F
Sbjct: 61 NVAKQQFEAAHNARRDALNAARLEAQLAAEALDVTLPGRGAGVGGLHPVTLTLERIASLF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
S+GF++ DGPEIE DF+NF ALN P +HPAR+M DTFY++ V LRTHTSP+Q
Sbjct: 121 RSMGFEVADGPEIEDDFHNFQALNIPADHPARAMQDTFYVEGGNV------LRTHTSPIQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R+ N+PPIK+I GRVYR+DSD+THSPMFHQ+EGLW+D +SF+DLK +F+R F
Sbjct: 175 VRHMLANQPPIKIIAPGRVYRVDSDATHSPMFHQMEGLWVDDGVSFADLKATLTDFLRRF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEK 300
FE D++Q+RFRPS+FPFTEPSAEID++ ++G WLE+ G G V+P VL N+N+DPE+
Sbjct: 235 FERDDLQVRFRPSFFPFTEPSAEIDVLGKNG-----WLEVGGCGMVHPNVLRNVNIDPER 289
Query: 301 YIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
Y GFAFG GL+R MLRYG+ DLRLF++ +++FLKQF
Sbjct: 290 YTGFAFGIGLDRFAMLRYGVTDLRLFFENDLSFLKQF 326
>sp|Q7NYC2|SYFA_CHRVO Phenylalanine--tRNA ligase alpha subunit OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=pheS PE=3 SV=1
Length = 328
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/337 (51%), Positives = 240/337 (71%), Gaps = 10/337 (2%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
MN + +L + + A + LE K+ +LGK+G+LT+ +K + ++ ERK G I
Sbjct: 1 MNNVDAILQAGQAAVAAAADLIELEQVKARFLGKSGELTELLKQLGKLAPEERKAAGATI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + N RD L +L+ L +D+TLPGRG GGLHP+ TLERI +F
Sbjct: 61 NQAKQAFEAAHNDKRDQLNAAKLEAQLAAEALDVTLPGRGSVGGGLHPVALTLERIAGLF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
++GF++ DGPEIE+DF NF ALN P+NHPAR+M DTFY++N V LRTHTSP+Q
Sbjct: 121 RTMGFEVADGPEIESDFYNFQALNIPENHPARAMQDTFYVENCDV------LRTHTSPIQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
R+ + ++PPIK++ GRVYR+DSD+THSPMFHQ+EGLW+++ +SF+DLK V +F+R F
Sbjct: 175 ARFMESHQPPIKIVAPGRVYRVDSDATHSPMFHQMEGLWVEEGVSFADLKAVVTDFLRRF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPEK 300
FE D++Q+RFRPS+FPFTE SAEID++ + +G WLE+ G G V+PKVL N+DPEK
Sbjct: 235 FERDDLQVRFRPSFFPFTETSAEIDVLDE----QGKWLEVGGCGMVHPKVLSIANIDPEK 290
Query: 301 YIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
Y GFAFG GL+R MLRYG++DLRLF++ ++NFLKQF
Sbjct: 291 YTGFAFGIGLDRFAMLRYGVNDLRLFFENDLNFLKQF 327
>sp|Q3SK30|SYFA_THIDA Phenylalanine--tRNA ligase alpha subunit OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=pheS PE=3 SV=1
Length = 344
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 242/344 (70%), Gaps = 8/344 (2%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M +++ +A + SLE K+ YLGK+G+LT+ +K++ + + RK G I
Sbjct: 1 MRNPNEIVAEALAAIHGCPDLPSLEQIKAGYLGKSGQLTELLKSLGAMPADARKTAGARI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K ++ L I R+ L++ +L L +D+TLPGRG G+HP+ RTL RIE +F
Sbjct: 61 NEAKQAVEAALKIRREALQQAELDRQLAAETLDVTLPGRGLGTAGVHPVSRTLARIEALF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
+SIGFD+ GPEIETDF NFTALN P++HPAR+MHDTFY++ + LLRTHTSP+Q
Sbjct: 121 HSIGFDVATGPEIETDFYNFTALNIPEDHPARAMHDTFYLRQNNAGGGE-LLRTHTSPVQ 179
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
IR+ + ++PP+++I GRVYR DSD TH+PMFHQIEGLW+D+++SF+DLKGV +F+R F
Sbjct: 180 IRHMQTHEPPLRIIAPGRVYRCDSDVTHTPMFHQIEGLWVDESVSFADLKGVLADFMRNF 239
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDI--VFQDGP-----LKGNWLEISGAGQVNPKVLCN 293
FE D++ +RFRPS+FPFTEPSAE+DI V G WLE+ G G V+P V +
Sbjct: 240 FERDDLAVRFRPSFFPFTEPSAEMDIGCVMCGGSGCRVCSHTGWLEVLGCGMVHPNVFRH 299
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+ +D E++IGFAFG G+ERL MLRYG+DDLRLF++ ++ FLKQF
Sbjct: 300 VGVDAERFIGFAFGLGVERLAMLRYGVDDLRLFFENDLRFLKQF 343
>sp|Q5F9U0|SYFA_NEIG1 Phenylalanine--tRNA ligase alpha subunit OS=Neisseria gonorrhoeae
(strain ATCC 700825 / FA 1090) GN=pheS PE=3 SV=2
Length = 329
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/338 (52%), Positives = 237/338 (70%), Gaps = 11/338 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M + +++ + A ++LE K+ YLGK G+LT +K + +S ERK G I
Sbjct: 1 MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKTLGQMSPEERKTIGAHI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + N RD L + +L+ L +DITLPGR + G LHP+ TL+R+ ++F
Sbjct: 61 NECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQEGGSLHPVTLTLQRVVELF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
+ +GF++ DGPEIE DF+NF ALN P NHPAR+M DTFY++N V LRTHTSP+Q
Sbjct: 121 HGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYVENGDV------LRTHTSPIQ 174
Query: 181 IRYSKINK-PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRV 239
IRY K PPI++I GRVYR+DSD+THSPMFHQ EGLW+++ ++F+DLK V+ +FIR
Sbjct: 175 IRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEGVTFADLKAVFTDFIRR 234
Query: 240 FFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPE 299
FFE D++Q+RFRPS+FPFTEPSAEIDI+ ++ G WLE+ G G V+P VL N+N+DPE
Sbjct: 235 FFERDDLQVRFRPSFFPFTEPSAEIDIMGEN----GKWLEVGGCGMVHPNVLKNVNIDPE 290
Query: 300 KYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
KY GFAFG GL+R MLRY ++DLRLF+ ++NFLKQF
Sbjct: 291 KYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQF 328
>sp|Q9JR76|SYFA_NEIMA Phenylalanine--tRNA ligase alpha subunit OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=pheS PE=3
SV=1
Length = 330
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/339 (51%), Positives = 237/339 (69%), Gaps = 11/339 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M + +++ + A ++LE K+ YLGK G+LT +K + +S ERK G I
Sbjct: 1 MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKTLGQMSPEERKTIGAHI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + N RD L + +L+ L +DITLPGR + G LHP+ TL+R+ ++F
Sbjct: 61 NECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQEGGSLHPVTLTLQRVVELF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
+ +GF++ DGPEIE DF+NF ALN P NHPAR+M DTFY++N V LRTHTSP+Q
Sbjct: 121 HGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYVENGDV------LRTHTSPIQ 174
Query: 181 IRYSKINK-PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRV 239
IRY K PP+++I GRVYR+DSD+THSPMFHQ EGLW+++ ++F+DLK V+ +FIR
Sbjct: 175 IRYMLDKKEPPVRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEGVTFADLKAVFTDFIRR 234
Query: 240 FFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPE 299
FFE D++Q+RFRPS+FPFTEPSAEIDI+ ++ G WLE+ G G V+P VL N+N+DPE
Sbjct: 235 FFERDDLQVRFRPSFFPFTEPSAEIDIMGEN----GKWLEVGGCGMVHPNVLKNVNIDPE 290
Query: 300 KYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
KY GFAFG GL+R MLRY ++DLRLF+ ++NFLKQF
Sbjct: 291 KYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFV 329
>sp|Q9K092|SYFA_NEIMB Phenylalanine--tRNA ligase alpha subunit OS=Neisseria meningitidis
serogroup B (strain MC58) GN=pheS PE=3 SV=1
Length = 330
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/339 (51%), Positives = 237/339 (69%), Gaps = 11/339 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M + +++ + A ++LE K+ YLGK G+LT +K + +S ERK G I
Sbjct: 1 MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKTLGQMSPEERKTIGAHI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + N R+ L + +L+ L +DITLPGR + G LHP+ TL+R+ ++F
Sbjct: 61 NECKNRFQTAFNAKREALNEVKLQARLAAEALDITLPGRAQEGGSLHPVTLTLQRVVELF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
+ +GF++ DGPEIE DF+NF ALN P NHPAR+M DTFY++N V LRTHTSP+Q
Sbjct: 121 HGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYVENGDV------LRTHTSPIQ 174
Query: 181 IRYSKINK-PPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRV 239
IRY K PPI++I GRVYR+DSD+THSPMFHQ EGLW+++ ++F+DLK V+ +FIR
Sbjct: 175 IRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEGVTFADLKAVFTDFIRR 234
Query: 240 FFESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKGNWLEISGAGQVNPKVLCNMNLDPE 299
FFE D++Q+RFRPS+FPFTEPSAEIDI+ ++ G WLE+ G G V+P VL N+N+DPE
Sbjct: 235 FFERDDLQVRFRPSFFPFTEPSAEIDIMGEN----GKWLEVGGCGMVHPNVLKNVNIDPE 290
Query: 300 KYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQFT 338
KY GFAFG GL+R MLRY ++DLRLF+ ++NFLKQF
Sbjct: 291 KYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFA 329
>sp|Q2YBS2|SYFA_NITMU Phenylalanine--tRNA ligase alpha subunit OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=pheS
PE=3 SV=1
Length = 344
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/343 (51%), Positives = 245/343 (71%), Gaps = 6/343 (1%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L LL +A F+ ++ LE K+ YLG++G+LT+ +K + I ER G I
Sbjct: 1 MTHLDHLLTEAIELFNRTEDLAELEQVKARYLGRHGQLTELLKGLGKIPPEERPAAGSRI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K +++ L+ R+ +++K+L+ L K+D+TL GRG GGLHPI LERI+ +F
Sbjct: 61 NQAKESLEAALSRRREAIQEKKLEEQLIEEKLDVTLSGRGTGMGGLHPITLALERIQSLF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
+S+GF + GPEIETDF NFTALN P++HPAR+MHDTFY+ + ++ LLRTHTSP+Q
Sbjct: 121 HSVGFTVASGPEIETDFYNFTALNIPESHPARAMHDTFYVDDENGGASEHLLRTHTSPVQ 180
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
IRY + N PP+KVI GRVYR DSD TH+PMFHQ+EGLWID++ +FS LKG+ +F++ F
Sbjct: 181 IRYMESNPPPLKVIAPGRVYRCDSDLTHTPMFHQVEGLWIDESANFSALKGILSDFMQHF 240
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDI---VFQDGPLKGN---WLEISGAGQVNPKVLCNM 294
FE D++ +RFRPS+FPFTEPSAE+DI + + G + WLE+ G G V+P V ++
Sbjct: 241 FERDDLPVRFRPSFFPFTEPSAEMDIGCVMCKTGCRVCSYTGWLEVLGCGMVHPNVFKHV 300
Query: 295 NLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
N+D +KY+GFAFG G+ERL MLRYG++DLRLF++ ++ FLKQF
Sbjct: 301 NIDSQKYVGFAFGLGVERLAMLRYGVNDLRLFFENDLRFLKQF 343
>sp|Q82VV5|SYFA_NITEU Phenylalanine--tRNA ligase alpha subunit OS=Nitrosomonas europaea
(strain ATCC 19718 / NBRC 14298) GN=pheS PE=3 SV=1
Length = 345
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/344 (52%), Positives = 240/344 (69%), Gaps = 13/344 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L+ L+ A F A SI LE K+ YLGK G++T +K ++ ++ ER GE I
Sbjct: 7 MGNLEDLVNAAIKLFDNAESIVDLEQIKAQYLGKTGEITILLKGLRELTPEERPVMGERI 66
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K ++ L R+++++K + L +D++LPGRG GG+HP+ RTL RIE +F
Sbjct: 67 NQAKKLLEDALIERRNLIQEKNMSARLAEESLDVSLPGRGLGMGGVHPVTRTLIRIESLF 126
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
+SIGF + GPEIETDF NFTALN +NHPAR+MHDTFY+ + LLRTHTSP+Q
Sbjct: 127 HSIGFGVATGPEIETDFYNFTALNIAENHPARAMHDTFYV------DGGKLLRTHTSPVQ 180
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
I Y + ++PPIK+I GRVYR DSD TH+PMFHQ+EGLWID+N+SFS LKGV + F+R F
Sbjct: 181 IHYMQNHRPPIKIIAPGRVYRCDSDVTHTPMFHQVEGLWIDENVSFSALKGVLVEFMRNF 240
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE DN+ +RFRPS+FPFTEPSAE+DI KG WLE+ G G V+P V+ +
Sbjct: 241 FEKDNLSVRFRPSFFPFTEPSAEMDIACVMCNGKGCRVCGETGWLEVLGCGMVHPNVMNH 300
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+ LD E++IGFAFG G+ERL MLRYG++DLRLF++ ++ FLKQF
Sbjct: 301 VGLDSEEHIGFAFGLGVERLAMLRYGVNDLRLFFENDLRFLKQF 344
>sp|C3JZN3|SYFA_PSEFS Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas fluorescens
(strain SBW25) GN=pheS PE=3 SV=1
Length = 338
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 233/344 (67%), Gaps = 14/344 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L L+ QA +A +++LE + +YLGK G+LTQ +K + N+ ER + G +I
Sbjct: 1 MENLDALVAQALEAVQSAEDVNALEQIRVHYLGKKGELTQVMKTLGNLPAEERPQVGALI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + + LN + L++ L L ID+TLPGRG+ GGLHPI RTLERIE+ F
Sbjct: 61 NVAKERVTEVLNARKASLEEADLAAKLAAESIDVTLPGRGQASGGLHPITRTLERIEQFF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
IG+ I +GPE+E D++NF ALN P +HPARSMHDTFY N LLRTHTSP+Q
Sbjct: 121 THIGYGIAEGPEVEDDYHNFEALNIPGHHPARSMHDTFYF------NANMLLRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R + NKPPI+++ GRVYR DSD THSPMFHQ+EGL +D++I+F+DLKG F+RVF
Sbjct: 175 VRTMEANKPPIRIVCPGRVYRSDSDITHSPMFHQVEGLLVDRDINFADLKGTIEEFLRVF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE + + +RFRPS+FPFTEPSAE+D+ KG WLE+ G G V+P VL
Sbjct: 235 FEKE-LAVRFRPSFFPFTEPSAEVDMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRM 293
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE++ GFAFG G+ERL MLRYG++DLRLF+ ++ FL QF
Sbjct: 294 SGIDPEEFSGFAFGMGVERLAMLRYGVNDLRLFFDNDLRFLAQF 337
>sp|B3PL12|SYFA_CELJU Phenylalanine--tRNA ligase alpha subunit OS=Cellvibrio japonicus
(strain Ueda107) GN=pheS PE=3 SV=1
Length = 337
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/344 (50%), Positives = 235/344 (68%), Gaps = 14/344 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L L +A + A +++LE + YLGK G +T +KN+ +S ER G I
Sbjct: 1 MENLVALTQEALKLVADAGDLNALEAVRVDYLGKKGHITALMKNLGGLSPEERPAAGAEI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K +++ LN + +L++ + L + +D++LPGRG + GGLHP+ RTL+RIE+IF
Sbjct: 61 NKAKDAVQEALNTRKQLLEQAAINAKLASEVVDVSLPGRGLHTGGLHPVTRTLQRIEEIF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
++G+ + +GPEIE D++NF ALN P +HPAR+MHDTFY+ + +V LRTHTSP+Q
Sbjct: 121 AAVGYSVEEGPEIEDDYHNFEALNIPSHHPARAMHDTFYVDDTHV------LRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R + KPPI+VI GRVYR DSD THSPMFHQ+EGL +DKNISF+DLKG F++ F
Sbjct: 175 VRTMENKKPPIRVICPGRVYRCDSDMTHSPMFHQVEGLVVDKNISFADLKGTMDQFLKAF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE+D + +RFRPSYFPFTEPSAE+DI KG WLE+ G G V+P+V
Sbjct: 235 FEAD-VPVRFRPSYFPFTEPSAEMDIQCTQCRGKGCRVCKSTGWLEVGGCGMVHPEVFNA 293
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE Y GFAFG G+ERL MLRYG++DLRLF++ ++ FLKQF
Sbjct: 294 SGVDPETYTGFAFGMGVERLAMLRYGVNDLRLFFENDLRFLKQF 337
>sp|Q4ZUG3|SYFA_PSEU2 Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=pheS PE=3 SV=1
Length = 338
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 232/344 (67%), Gaps = 14/344 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L L+ QA +A I++LE + +YLGK G+LTQ +K + N+ ER + G +I
Sbjct: 1 MENLDALVSQALEAVQSAEDINALEQIRVHYLGKKGELTQVMKTLGNLPAEERPQVGALI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + + LN + ++ +L L ID+TLPGRG+ GGLHPI RTLERIE+ F
Sbjct: 61 NVAKERVTEVLNARKASFEQAELTARLAAECIDVTLPGRGQTSGGLHPITRTLERIEQFF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
IG+ I +GPE+E D++NF ALN P +HPARSMHDTFY N LLRTHTSP+Q
Sbjct: 121 THIGYGIAEGPEVEDDYHNFEALNIPGHHPARSMHDTFYF------NANMLLRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R + +PPI+++ GRVYR DSD THSPMFHQIEGL +D++I+F+DLKG F+RVF
Sbjct: 175 VRTMESQQPPIRIVCPGRVYRSDSDITHSPMFHQIEGLLVDRDINFADLKGTIEEFLRVF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE + + +RFRPSYFPFTEPSAE+D+ KG WLE+ G G V+P VL
Sbjct: 235 FEKE-LAVRFRPSYFPFTEPSAEVDMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRM 293
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE++ GFAFG G+ERL MLRYG++DLRLF+ ++ FL QF
Sbjct: 294 SGIDPEEFQGFAFGMGVERLAMLRYGVNDLRLFFDNDLRFLAQF 337
>sp|Q48JR9|SYFA_PSE14 Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=pheS PE=3
SV=1
Length = 338
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 232/344 (67%), Gaps = 14/344 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L L+ QA +A I++LE + +YLGK G+LTQ +K + N+ ER + G +I
Sbjct: 1 MENLDALVSQALEAVQSAEDINALEQIRVHYLGKKGELTQVMKTLGNLPAEERPQVGALI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + + LN + ++ +L L ID+TLPGRG+ GGLHPI RTLERIE+ F
Sbjct: 61 NVAKERVTEVLNARKASFEQAELTARLAAECIDVTLPGRGQTSGGLHPITRTLERIEQFF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
IG+ I +GPE+E D++NF ALN P +HPARSMHDTFY N LLRTHTSP+Q
Sbjct: 121 THIGYGIAEGPEVEDDYHNFEALNIPGHHPARSMHDTFYF------NANMLLRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R + +PPI+++ GRVYR DSD THSPMFHQIEGL +D++I+F+DLKG F+RVF
Sbjct: 175 VRTMESQQPPIRIVCPGRVYRSDSDITHSPMFHQIEGLLVDRDINFADLKGTIEEFLRVF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE + + +RFRPSYFPFTEPSAE+D+ KG WLE+ G G V+P VL
Sbjct: 235 FEKE-LAVRFRPSYFPFTEPSAEVDMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRM 293
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE++ GFAFG G+ERL MLRYG++DLRLF+ ++ FL QF
Sbjct: 294 SGIDPEEFQGFAFGMGVERLAMLRYGVNDLRLFFDNDLRFLAQF 337
>sp|Q883H8|SYFA_PSESM Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=pheS PE=3 SV=1
Length = 338
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 231/344 (67%), Gaps = 14/344 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L L+ QA +A I++LE + +YLGK G+LTQ +K + N+ ER G +I
Sbjct: 1 MENLDALVSQALEAVQSAEDINALEQIRVHYLGKKGELTQVMKTLGNLPAEERPHVGALI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + + LN + ++ +L L ID+TLPGRG+ GGLHPI RTLERIE+ F
Sbjct: 61 NVAKERVTEVLNARKASFEQAELTAKLAAECIDVTLPGRGQTSGGLHPITRTLERIEQFF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
IG+ I +GPE+E D++NF ALN P +HPARSMHDTFY N LLRTHTSP+Q
Sbjct: 121 THIGYGIAEGPEVEDDYHNFEALNIPGHHPARSMHDTFYF------NANMLLRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R + +PPI+++ GRVYR DSD THSPMFHQIEGL +D++I+F+DLKG F+RVF
Sbjct: 175 VRTMESQQPPIRIVCPGRVYRSDSDITHSPMFHQIEGLLVDRDINFADLKGTIEEFLRVF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE + + +RFRPSYFPFTEPSAE+D+ KG WLE+ G G V+P VL
Sbjct: 235 FEKE-LAVRFRPSYFPFTEPSAEVDMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRM 293
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE++ GFAFG G+ERL MLRYG++DLRLF+ ++ FL QF
Sbjct: 294 SGIDPEEFQGFAFGMGVERLAMLRYGVNDLRLFFDNDLRFLAQF 337
>sp|Q3KEX8|SYFA_PSEPF Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas fluorescens
(strain Pf0-1) GN=pheS PE=3 SV=1
Length = 338
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 230/344 (66%), Gaps = 14/344 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L L+ QA +A I++LE + YLGK G+LTQ +K + N+ ER + G +I
Sbjct: 1 MENLDALVSQALEAVQSAEDINALEQIRVQYLGKKGELTQVMKTLGNLPAEERPQVGALI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K + LN + ++ +L L ID+TLPGRG+ GGLHP+ RTLERIE+ F
Sbjct: 61 NVAKERVTGVLNARMALFEEAELAAKLSAESIDVTLPGRGQTSGGLHPVTRTLERIEQFF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
IG+ I +GPE+E D++NF ALN P +HPARSMHDTFY N LLRTHTSP+Q
Sbjct: 121 THIGYGIAEGPEVEDDYHNFEALNIPGHHPARSMHDTFYF------NANMLLRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R + KPPI+++ GRVYR DSD THSPMFHQ+EGL +D++I+F+DLKG F+RVF
Sbjct: 175 VRTMESKKPPIRIVCPGRVYRSDSDITHSPMFHQVEGLLVDRDINFADLKGTIEEFLRVF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE + + +RFRPSYFPFTEPSAE+D+ KG WLE+ G G V+P VL
Sbjct: 235 FEKE-LAVRFRPSYFPFTEPSAEVDMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRM 293
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPE++ GFAFG G+ERL MLRYG++DLRLF+ ++ FL QF
Sbjct: 294 SGIDPEEFSGFAFGMGVERLAMLRYGVNDLRLFFDNDLRFLAQF 337
>sp|C1DF46|SYFA_AZOVD Phenylalanine--tRNA ligase alpha subunit OS=Azotobacter vinelandii
(strain DJ / ATCC BAA-1303) GN=pheS PE=3 SV=1
Length = 338
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/344 (49%), Positives = 232/344 (67%), Gaps = 14/344 (4%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L L+ QA + +++LE + +YLGK G+LTQ ++ + +S ER + G +I
Sbjct: 1 MENLDALVAQALEAVQHSEDVNALEQLRVHYLGKKGELTQLMQTLGKLSAEERPKAGALI 60
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N+ K ++++ LN + L+ L L +ID+TLPGRG+ GGLHP+ RTLER+E+ F
Sbjct: 61 NTAKNSVQEALNTRKADLESAALTAKLAAERIDVTLPGRGQASGGLHPVTRTLERVEQFF 120
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
IG+ + +GPE+E D++NF ALN P +HPAR+MHDTFY N LLRTHTSP+Q
Sbjct: 121 TRIGYSVAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYF------NANMLLRTHTSPVQ 174
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
+R + ++PPI+++ GRVYR DSD THSPMFHQ+EGL ID+ ISF+DLKG F+RVF
Sbjct: 175 VRTMESSQPPIRIVCPGRVYRCDSDITHSPMFHQVEGLLIDEGISFADLKGTIEEFLRVF 234
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE + +RFRPS+FPFTEPSAE+D+ G WLE+ G G V+P VL
Sbjct: 235 FEKP-LGVRFRPSFFPFTEPSAEVDMQCVICGGHGCRVCKHTGWLEVMGCGMVHPNVLGM 293
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+DPEKY GFAFG G+ERL MLRYG++DLRLF+ ++ FL QF
Sbjct: 294 SGIDPEKYQGFAFGMGVERLAMLRYGVNDLRLFFDNDLRFLAQF 337
>sp|Q3JBZ8|SYFA_NITOC Phenylalanine--tRNA ligase alpha subunit OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=pheS PE=3 SV=1
Length = 352
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 13/344 (3%)
Query: 1 MNELKKLLIQAKIDFSTAVSISSLENAKSYYLGKNGKLTQYIKNIKNISINERKRYGEII 60
M L +++ +A+ S A + +L+ + YLGK G+LT + K + +S ER +G+ +
Sbjct: 14 MQALAEIVAKARQAVSAAPDLPTLDELRVRYLGKKGELTGHFKALDQVSAEERPIFGKAV 73
Query: 61 NSIKINIKKELNIHRDILKKKQLKVSLKTNKIDITLPGRGKNKGGLHPIMRTLERIEKIF 120
N K ++ E+ R L++ L+ L + ID+TLPGRG + GGLHP+ RTL RIE F
Sbjct: 74 NEAKQALQSEIEARRKDLEQAALEARLASEAIDVTLPGRGLDVGGLHPVTRTLARIEAFF 133
Query: 121 YSIGFDITDGPEIETDFNNFTALNSPKNHPARSMHDTFYIKNRYVSNNKPLLRTHTSPMQ 180
GF+I +GPE+E D++NF ALN P +HPAR+MHDTFY + LLRTHTSP+Q
Sbjct: 134 RYAGFEIHEGPEVEDDYHNFEALNIPPSHPARAMHDTFYF------DAHTLLRTHTSPVQ 187
Query: 181 IRYSKINKPPIKVITSGRVYRIDSDSTHSPMFHQIEGLWIDKNISFSDLKGVYLNFIRVF 240
IR + PP+++I GRVYR DSD TH+PMFHQ+EGL +D+ +SF+DLKG+ +F+R +
Sbjct: 188 IRVMEHQGPPLRIIAPGRVYRCDSDLTHTPMFHQVEGLLVDEQVSFTDLKGILSDFLRAY 247
Query: 241 FESDNIQIRFRPSYFPFTEPSAEIDIVFQDGPLKG-------NWLEISGAGQVNPKVLCN 293
FE +++++RFRPSYFPFTEPSAE DI + +G WLE+ G G V+PKV +
Sbjct: 248 FEREDLEVRFRPSYFPFTEPSAETDIQCVNCSGEGCRVCGHTGWLEVLGCGMVHPKVFEH 307
Query: 294 MNLDPEKYIGFAFGSGLERLTMLRYGIDDLRLFYKGNINFLKQF 337
+ +D E+Y+GFAFG G+ERL MLRYG++DLRLF++ ++ FL+QF
Sbjct: 308 VGIDSERYLGFAFGLGVERLAMLRYGVNDLRLFFENDLRFLRQF 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,562,826
Number of Sequences: 539616
Number of extensions: 5847253
Number of successful extensions: 18096
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 15077
Number of HSP's gapped (non-prelim): 850
length of query: 338
length of database: 191,569,459
effective HSP length: 118
effective length of query: 220
effective length of database: 127,894,771
effective search space: 28136849620
effective search space used: 28136849620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)