Your job contains 1 sequence.
>psy9578
MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL
WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENLTNK
AF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9578
(122 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|SO_2302 - symbol:SO_2302 "ribosomal protein L20"... 408 4.3e-38 1
UNIPROTKB|P0A479 - symbol:rplT "50S ribosomal protein L20... 396 8.0e-37 1
TIGR_CMR|VC_A0290 - symbol:VC_A0290 "ribosomal protein L2... 396 8.0e-37 1
UNIPROTKB|P0A7L3 - symbol:rplT "50S ribosomal subunit pro... 390 3.5e-36 1
TIGR_CMR|CPS_2906 - symbol:CPS_2906 "ribosomal protein L2... 386 9.2e-36 1
TIGR_CMR|CBU_1323 - symbol:CBU_1323 "ribosomal protein L2... 380 4.0e-35 1
TIGR_CMR|CHY_1576 - symbol:CHY_1576 "ribosomal protein L2... 362 3.2e-33 1
TIGR_CMR|ECH_0197 - symbol:ECH_0197 "ribosomal protein L2... 359 6.7e-33 1
TIGR_CMR|BA_4817 - symbol:BA_4817 "ribosomal protein L20"... 320 9.1e-29 1
TIGR_CMR|NSE_0215 - symbol:NSE_0215 "ribosomal protein L2... 318 1.5e-28 1
TIGR_CMR|SPO_3598 - symbol:SPO_3598 "ribosomal protein L2... 317 1.9e-28 1
TIGR_CMR|CJE_0295 - symbol:CJE_0295 "ribosomal protein L2... 308 1.7e-27 1
TIGR_CMR|APH_0060 - symbol:APH_0060 "ribosomal protein L2... 299 1.5e-26 1
TIGR_CMR|GSU_1518 - symbol:GSU_1518 "ribosomal protein L2... 295 4.0e-26 1
UNIPROTKB|P66105 - symbol:rplT "50S ribosomal protein L20... 291 1.1e-25 1
TIGR_CMR|DET_0750 - symbol:DET_0750 "ribosomal protein L2... 257 4.3e-22 1
TAIR|locus:2015661 - symbol:AT1G16740 species:3702 "Arabi... 248 3.9e-21 1
DICTYBASE|DDB_G0273771 - symbol:DDB_G0273771 "50S ribosom... 233 1.5e-19 1
DICTYBASE|DDB_G0273295 - symbol:DDB_G0273295 "39S ribosom... 233 1.5e-19 1
UNIPROTKB|F1RJD0 - symbol:MRPL20 "Uncharacterized protein... 199 6.0e-16 1
UNIPROTKB|E1BRV2 - symbol:MRPL20 "Uncharacterized protein... 196 1.3e-15 1
UNIPROTKB|P0C447 - symbol:rpl20 "50S ribosomal protein L2... 195 1.6e-15 1
UNIPROTKB|P12139 - symbol:rpl20 "50S ribosomal protein L2... 195 1.6e-15 1
UNIPROTKB|P0C448 - symbol:rpl20 "50S ribosomal protein L2... 194 2.0e-15 1
UNIPROTKB|Q6ENF0 - symbol:rpl20 "50S ribosomal protein L2... 194 2.0e-15 1
UNIPROTKB|Q2TBR2 - symbol:MRPL20 "39S ribosomal protein L... 192 3.3e-15 1
UNIPROTKB|E2QZ57 - symbol:MRPL20 "Uncharacterized protein... 191 4.2e-15 1
MGI|MGI:2137221 - symbol:Mrpl20 "mitochondrial ribosomal ... 189 6.9e-15 1
RGD|1588219 - symbol:Mrpl20 "mitochondrial ribosomal prot... 187 1.1e-14 1
UNIPROTKB|Q9BYC9 - symbol:MRPL20 "39S ribosomal protein L... 182 3.8e-14 1
ZFIN|ZDB-GENE-030131-5299 - symbol:mrpl20 "mitochondrial ... 182 3.8e-14 1
GENEDB_PFALCIPARUM|PF14_0709 - symbol:PF14_0709 "ribosoma... 181 4.9e-14 1
UNIPROTKB|Q8IK97 - symbol:PF14_0709 "Mitochondrial riboso... 181 4.9e-14 1
FB|FBgn0036335 - symbol:mRpL20 "mitochondrial ribosomal p... 153 4.5e-11 1
UNIPROTKB|B7Z746 - symbol:MRPL20 "39S ribosomal protein L... 135 3.6e-09 1
UNIPROTKB|I3L2X1 - symbol:MRPL20 "39S ribosomal protein L... 96 5.0e-05 1
>TIGR_CMR|SO_2302 [details] [associations]
symbol:SO_2302 "ribosomal protein L20" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
RefSeq:NP_717898.1 ProteinModelPortal:Q8EER6 SMR:Q8EER6
GeneID:1170027 KEGG:son:SO_2302 PATRIC:23524227 Uniprot:Q8EER6
Length = 118
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 79/117 (67%), Positives = 98/117 (83%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
MPRVKRGVTARARHKKVLK AKGY+G R+ YRVA QAV A QYAYRDRR KKR FR L
Sbjct: 1 MPRVKRGVTARARHKKVLKLAKGYYGARSRTYRVAVQAVTKAGQYAYRDRRQKKRQFRQL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI+RINAA R++ ++Y+ F+NGLKK+SI++DRK+LA IA+ DK+VF+++V + KE L
Sbjct: 61 WIARINAAARQNGLSYSRFINGLKKASIEIDRKILADIAVFDKVVFATLVEKAKEAL 117
>UNIPROTKB|P0A479 [details] [associations]
symbol:rplT "50S ribosomal protein L20" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 eggNOG:COG0292
KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185 EMBL:AF055586
EMBL:AF179591 PIR:B82476 RefSeq:NP_232686.1
ProteinModelPortal:P0A479 SMR:P0A479 PRIDE:P0A479 DNASU:2611990
GeneID:2611990 KEGG:vch:VCA0290 PATRIC:20085147 Uniprot:P0A479
Length = 117
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 77/114 (67%), Positives = 95/114 (83%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
MPRVKRGV ARARHKKVLKQAKGY+G R+ VYRVA QAV+ A QYAYRDRR KKR FR L
Sbjct: 1 MPRVKRGVQARARHKKVLKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRAKKRQFRQL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
WI+RINAA R++ ++Y+ F+NGLKK+SI++DRK+LA IA+ DK F+ +V + K
Sbjct: 61 WIARINAAARQNGLSYSRFINGLKKASIEIDRKILADIAVFDKAAFAVLVEKAK 114
>TIGR_CMR|VC_A0290 [details] [associations]
symbol:VC_A0290 "ribosomal protein L20" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 eggNOG:COG0292 KO:K02887
OMA:GRRKNVW ProtClustDB:PRK05185 EMBL:AF055586 EMBL:AF179591
PIR:B82476 RefSeq:NP_232686.1 ProteinModelPortal:P0A479 SMR:P0A479
PRIDE:P0A479 DNASU:2611990 GeneID:2611990 KEGG:vch:VCA0290
PATRIC:20085147 Uniprot:P0A479
Length = 117
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 77/114 (67%), Positives = 95/114 (83%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
MPRVKRGV ARARHKKVLKQAKGY+G R+ VYRVA QAV+ A QYAYRDRR KKR FR L
Sbjct: 1 MPRVKRGVQARARHKKVLKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRAKKRQFRQL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
WI+RINAA R++ ++Y+ F+NGLKK+SI++DRK+LA IA+ DK F+ +V + K
Sbjct: 61 WIARINAAARQNGLSYSRFINGLKKASIEIDRKILADIAVFDKAAFAVLVEKAK 114
>UNIPROTKB|P0A7L3 [details] [associations]
symbol:rplT "50S ribosomal subunit protein L20"
species:83333 "Escherichia coli K-12" [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IMP] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000027
"ribosomal large subunit assembly" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=IDA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0000900 GO:GO:0000027 PDB:2VHM PDBsum:2VHM PDB:2RDO
PDBsum:2RDO GO:GO:0022625 EMBL:V00291 EMBL:K02844 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887
PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT
PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ
PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX OMA:GRRKNVW ProtClustDB:PRK05185
EMBL:M10423 PIR:D64930 RefSeq:NP_416231.1 RefSeq:YP_489978.1
ProteinModelPortal:P0A7L3 SMR:P0A7L3 DIP:DIP-47941N IntAct:P0A7L3
MINT:MINT-1321645 PaxDb:P0A7L3 PRIDE:P0A7L3
EnsemblBacteria:EBESCT00000000901 EnsemblBacteria:EBESCT00000004116
EnsemblBacteria:EBESCT00000004117 EnsemblBacteria:EBESCT00000004118
EnsemblBacteria:EBESCT00000004120 EnsemblBacteria:EBESCT00000016309
GeneID:12931309 GeneID:945152 KEGG:ecj:Y75_p1691 KEGG:eco:b1716
PATRIC:32118736 EchoBASE:EB0874 EcoGene:EG10881
BioCyc:EcoCyc:EG10881-MONOMER BioCyc:ECOL316407:JW1706-MONOMER
EvolutionaryTrace:P0A7L3 Genevestigator:P0A7L3 Uniprot:P0A7L3
Length = 118
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 74/117 (63%), Positives = 97/117 (82%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVKRGV ARARHKK+LKQAKGY+G R+ VYRVA QAV+ A QYAYRDRR +KR FR L
Sbjct: 1 MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI+RINAA R++ ++Y+ F+NGLKK+S+++DRK+LA IA+ DK+ F+++V + K L
Sbjct: 61 WIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAAL 117
>TIGR_CMR|CPS_2906 [details] [associations]
symbol:CPS_2906 "ribosomal protein L20" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
RefSeq:YP_269607.1 ProteinModelPortal:Q480B2 SMR:Q480B2
STRING:Q480B2 GeneID:3520510 KEGG:cps:CPS_2906 PATRIC:21468837
BioCyc:CPSY167879:GI48-2956-MONOMER Uniprot:Q480B2
Length = 119
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 75/117 (64%), Positives = 95/117 (81%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVKRGV ARARHKKVLKQAKGY+G R+ VYRVA QAV A QYAYRDRR +KR FR L
Sbjct: 1 MARVKRGVQARARHKKVLKQAKGYYGARSRVYRVAYQAVTKAGQYAYRDRRQRKRQFRQL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI+RINAA R++ ++Y+ F+NGLKK+SI++DRK+LA IA+ DK F+ +V + + +L
Sbjct: 61 WIARINAAARQNGLSYSKFINGLKKASIEIDRKILADIAVYDKAAFTFLVEKAQASL 117
>TIGR_CMR|CBU_1323 [details] [associations]
symbol:CBU_1323 "ribosomal protein L20" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:NP_820313.1 ProteinModelPortal:Q83C13
SMR:Q83C13 GeneID:1209229 KEGG:cbu:CBU_1323 PATRIC:17931381
BioCyc:CBUR227377:GJ7S-1313-MONOMER Uniprot:Q83C13
Length = 119
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 72/117 (61%), Positives = 92/117 (78%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
MPRVKRGVTARARHKKVL +AKGY+G R+ V+RVAKQAV+ A QYAYRDR+ +KR FR+L
Sbjct: 1 MPRVKRGVTARARHKKVLTKAKGYYGARSRVFRVAKQAVIKAAQYAYRDRKQRKRQFRAL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI RINAA REH ++Y+ +NGL K+S+ +DRK LA +A+ DK F + + K+ L
Sbjct: 61 WIVRINAAAREHGLSYSRLINGLMKASVAIDRKNLAELAVYDKAAFGKLAEKAKQAL 117
>TIGR_CMR|CHY_1576 [details] [associations]
symbol:CHY_1576 "ribosomal protein L20" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_360405.1 ProteinModelPortal:Q3ABS9
SMR:Q3ABS9 STRING:Q3ABS9 GeneID:3726239 KEGG:chy:CHY_1576
PATRIC:21276277 BioCyc:CHYD246194:GJCN-1575-MONOMER Uniprot:Q3ABS9
Length = 117
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 66/117 (56%), Positives = 89/117 (76%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
MPR K V +R RHKK+LK AKGYFG ++ ++RVAKQ VM ++ YAYRDRR +KR FR L
Sbjct: 1 MPRAKSSVVSRKRHKKILKLAKGYFGAKSKLFRVAKQQVMKSLMYAYRDRRARKREFRKL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI+RINAA R H +TY+ MNGLKK+ ++++RK+LA +A+ DK F+ +V K+NL
Sbjct: 61 WITRINAAARMHGLTYSRMMNGLKKAGVEINRKMLADLAVNDKNAFAELVEIAKKNL 117
>TIGR_CMR|ECH_0197 [details] [associations]
symbol:ECH_0197 "ribosomal protein L20" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_507021.1 ProteinModelPortal:Q2GHR2
SMR:Q2GHR2 STRING:Q2GHR2 GeneID:3927150 KEGG:ech:ECH_0197
PATRIC:20575931 BioCyc:ECHA205920:GJNR-197-MONOMER Uniprot:Q2GHR2
Length = 124
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 73/121 (60%), Positives = 92/121 (76%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVKRGVT RARHKKV+K AKGY GR + YR+A Q V A+QYAYRDRRN+KR FRSL
Sbjct: 1 MARVKRGVTTRARHKKVIKLAKGYRGRSKNCYRIALQRVEKALQYAYRDRRNRKRFFRSL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENLTNK 120
WI RINAAVR+H + Y+ F++GL +++ L+RK+LA +A+ K F IV+ IKE L NK
Sbjct: 61 WIMRINAAVRQHGLLYSDFIHGLSLANVTLNRKVLADMAVNHKDHFKQIVDLIKEAL-NK 119
Query: 121 A 121
+
Sbjct: 120 S 120
>TIGR_CMR|BA_4817 [details] [associations]
symbol:BA_4817 "ribosomal protein L20" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:NP_847020.1 RefSeq:YP_021463.1
RefSeq:YP_030716.1 ProteinModelPortal:Q81L17 SMR:Q81L17
DNASU:1083953 EnsemblBacteria:EBBACT00000008961
EnsemblBacteria:EBBACT00000014864 EnsemblBacteria:EBBACT00000023349
GeneID:1083953 GeneID:2815694 GeneID:2851580 KEGG:ban:BA_4817
KEGG:bar:GBAA_4817 KEGG:bat:BAS4469
BioCyc:BANT260799:GJAJ-4526-MONOMER
BioCyc:BANT261594:GJ7F-4679-MONOMER Uniprot:Q81L17
Length = 118
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 58/117 (49%), Positives = 85/117 (72%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
MPRVK G R R KKV+K AKGY+G +N++++VA Q VM ++ YA+RDRR KKR FR L
Sbjct: 1 MPRVKGGTVTRQRRKKVIKLAKGYYGSKNTLFKVANQQVMKSLMYAFRDRRQKKRDFRKL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI+RINAA R + ++Y+ M+GLK + I+++RK+LA +A+ D+ F+ + K N+
Sbjct: 61 WITRINAAARMNGLSYSRLMHGLKNAGIEVNRKMLADLAVHDEKAFAELATVAKNNI 117
>TIGR_CMR|NSE_0215 [details] [associations]
symbol:NSE_0215 "ribosomal protein L20" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:CP000237
GenomeReviews:CP000237_GR PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_506110.1 ProteinModelPortal:Q2GEI6
SMR:Q2GEI6 STRING:Q2GEI6 GeneID:3931364 KEGG:nse:NSE_0215
PATRIC:22680529 BioCyc:NSEN222891:GHFU-246-MONOMER Uniprot:Q2GEI6
Length = 117
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 62/117 (52%), Positives = 82/117 (70%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVKRGV R RHKKV+KQAKG+ GR + YR+A + + + QYAYRDR+ +KR FRSL
Sbjct: 1 MARVKRGVQVRQRHKKVIKQAKGFHGRSKNCYRIALRRLEKSWQYAYRDRKVRKRDFRSL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI RINAAVR + Y+ FM GLK + + ++RK+L+ +AI+ F IVN+ K L
Sbjct: 61 WIQRINAAVRSFGLVYSVFMKGLKAAGVDVNRKVLSELAISQPSAFGEIVNKAKAAL 117
>TIGR_CMR|SPO_3598 [details] [associations]
symbol:SPO_3598 "ribosomal protein L20" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_168793.1 ProteinModelPortal:Q5LMG5
SMR:Q5LMG5 GeneID:3196278 KEGG:sil:SPO3598 PATRIC:23380673
Uniprot:Q5LMG5
Length = 121
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 66/119 (55%), Positives = 84/119 (70%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVK G ARHKKVLK AKGY+GRR S ++VA QAV A QYA RDR+ +KR FR+L
Sbjct: 1 MSRVKGGTVTHARHKKVLKAAKGYYGRRKSSFKVATQAVDKANQYATRDRKARKRNFRAL 60
Query: 61 WISRINAAVREHK--MTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI RINAAVR H +TY+ F+NGL + I++DRK+LA +A+ + F +IV Q + L
Sbjct: 61 WIQRINAAVRSHDEALTYSRFINGLNLAGIEVDRKVLADLAVHEPEAFGAIVAQAQAAL 119
>TIGR_CMR|CJE_0295 [details] [associations]
symbol:CJE_0295 "ribosomal protein L20" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_178316.1 ProteinModelPortal:Q5HWL9
SMR:Q5HWL9 STRING:Q5HWL9 GeneID:3231057 KEGG:cjr:CJE0295
PATRIC:20042290 BioCyc:CJEJ195099:GJC0-300-MONOMER Uniprot:Q5HWL9
Length = 117
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/117 (52%), Positives = 81/117 (69%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVK GV R RHKKVLK A+G++ R +R AK+ + ++ YAYRDRR KKR FR L
Sbjct: 1 MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLVYAYRDRRRKKRDFRRL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENL 117
WI RINAA R + ++Y+ F+NGLKK+ I+LDRK+LA +A+ D F+ I K+ L
Sbjct: 61 WIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMNDAAAFAKIAEAAKKAL 117
>TIGR_CMR|APH_0060 [details] [associations]
symbol:APH_0060 "ribosomal protein L20" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0015934 "large ribosomal subunit"
evidence=ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 RefSeq:YP_504693.1
ProteinModelPortal:Q2GLQ8 SMR:Q2GLQ8 STRING:Q2GLQ8 GeneID:3930465
KEGG:aph:APH_0060 PATRIC:20948672 OMA:GRRKNVW ProtClustDB:PRK05185
BioCyc:APHA212042:GHPM-98-MONOMER Uniprot:Q2GLQ8
Length = 128
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/111 (55%), Positives = 77/111 (69%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVKRGVT RARHKKV+ AKGY GR + YR A Q + A+ YAYRDRR +KR FRSL
Sbjct: 1 MARVKRGVTTRARHKKVIALAKGYRGRSKNCYRAALQRLEKALAYAYRDRRARKRDFRSL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVN 111
WI RINAA + + Y+ FM+G+ SI L+RK+LA +A+ DK F I +
Sbjct: 61 WIVRINAAAGLYGLRYSEFMHGVSLCSIGLNRKMLAEMAVRDKGAFEKIAH 111
>TIGR_CMR|GSU_1518 [details] [associations]
symbol:GSU_1518 "ribosomal protein L20" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
RefSeq:NP_952569.1 ProteinModelPortal:Q74D01 SMR:Q74D01
GeneID:2687711 KEGG:gsu:GSU1518 PATRIC:22025877
BioCyc:GSUL243231:GH27-1501-MONOMER Uniprot:Q74D01
Length = 117
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 58/114 (50%), Positives = 83/114 (72%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
MPRVKRG AR R KVLK AKG+ G R+ ++R A +AV A+ YA+RDR+ KKR FR+L
Sbjct: 1 MPRVKRGFKARRRRNKVLKLAKGFRGARSKLFRSATEAVDRALNYAFRDRKVKKRDFRAL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
WI+RINAA R + ++Y+ ++GLK++ +++DRK+LA +A++D FS I K
Sbjct: 61 WITRINAASRLNGLSYSKLIHGLKQAQVEIDRKVLADLAVSDPKGFSEIATLAK 114
>UNIPROTKB|P66105 [details] [associations]
symbol:rplT "50S ribosomal protein L20" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
EMBL:BX842577 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
PIR:F70619 RefSeq:NP_216159.1 RefSeq:NP_336136.1
RefSeq:YP_006515034.1 ProteinModelPortal:P66105 SMR:P66105
PRIDE:P66105 EnsemblBacteria:EBMYCT00000000901
EnsemblBacteria:EBMYCT00000072851 GeneID:13316424 GeneID:885455
GeneID:924365 KEGG:mtc:MT1681 KEGG:mtu:Rv1643 KEGG:mtv:RVBD_1643
PATRIC:18125460 TubercuList:Rv1643 Uniprot:P66105
Length = 129
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 54/111 (48%), Positives = 80/111 (72%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RVKR V A + + +LK ++GY G+R+ +YR AK+ +H++ YAYRDRR +K FR L
Sbjct: 1 MARVKRAVNAHKKRRSILKASRGYRGQRSRLYRKAKEQQLHSLNYAYRDRRARKGEFRKL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVN 111
WI+RINAA R + +TYN + GLK + +++DRK LA IAI+D F+++V+
Sbjct: 61 WIARINAAARLNDITYNRLIQGLKAAGVEVDRKNLADIAISDPAAFTALVD 111
>TIGR_CMR|DET_0750 [details] [associations]
symbol:DET_0750 "ribosomal protein L20" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 ProtClustDB:PRK05185
RefSeq:YP_181484.1 ProteinModelPortal:Q3Z8G5 STRING:Q3Z8G5
GeneID:3229942 KEGG:det:DET0750 PATRIC:21608561 OMA:GIATHKR
BioCyc:DETH243164:GJNF-751-MONOMER Uniprot:Q3Z8G5
Length = 119
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 47/109 (43%), Positives = 74/109 (67%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M R+K G+ RHKKVL KG+ R+S+++ A ++++HAM YA+ RR +K R L
Sbjct: 1 MARIKGGIATHKRHKKVLALTKGHASARHSLFKRAHESMVHAMSYAFAHRRARKGDMRRL 60
Query: 61 WISRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
WI+RINAA R +TY M+GLK + I ++RK+LA +A++D + F+++
Sbjct: 61 WITRINAAARAEGLTYGELMSGLKTAGIDINRKVLADMAVSDSVAFAAV 109
>TAIR|locus:2015661 [details] [associations]
symbol:AT1G16740 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 HAMAP:MF_00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 OMA:MRTLWIS HSSP:O67086
UniGene:At.16104 EMBL:AY086501 EMBL:BT024573 IPI:IPI00540437
RefSeq:NP_173118.1 ProteinModelPortal:Q8LCN1 SMR:Q8LCN1
STRING:Q8LCN1 PaxDb:Q8LCN1 PRIDE:Q8LCN1 DNASU:838245
EnsemblPlants:AT1G16740.1 GeneID:838245 KEGG:ath:AT1G16740
TAIR:At1g16740 InParanoid:Q8LCN1 PhylomeDB:Q8LCN1
ProtClustDB:CLSN2679823 Genevestigator:Q8LCN1 Uniprot:Q8LCN1
Length = 126
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 47/107 (43%), Positives = 74/107 (69%)
Query: 15 KKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREHKM 74
K++ K AKG+ GR + R+A++ V A+QY+YRDRRNKKR R LWI RINA R+H +
Sbjct: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQHGV 63
Query: 75 TYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENLT-NK 120
Y F++GL K +IQL+RK+L+ +++ + F ++V+ +++ NK
Sbjct: 64 NYGNFIHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRKSFPGNK 110
>DICTYBASE|DDB_G0273771 [details] [associations]
symbol:DDB_G0273771 "50S ribosomal protein L20"
species:44689 "Dictyostelium discoideum" [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 dictyBase:DDB_G0273771 dictyBase:DDB_G0273295
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 eggNOG:COG0292 OMA:MRTLWIS RefSeq:XP_644502.1
RefSeq:XP_644748.1 ProteinModelPortal:Q556W7 STRING:Q556W7
EnsemblProtists:DDB0203044 EnsemblProtists:DDB0217299
GeneID:8618848 GeneID:8619128 KEGG:ddi:DDB_G0273295
KEGG:ddi:DDB_G0273771 InParanoid:Q556W7 ProtClustDB:PTZ00030
Uniprot:Q556W7
Length = 122
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 42/104 (40%), Positives = 68/104 (65%)
Query: 16 KVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREHKMT 75
KV K AKG+FGR + +A++ V ++Y Y R+ KKR FR +WI RINA R+H+MT
Sbjct: 5 KVFKLAKGFFGRSKNCKSLARERVEKGLEYNYVSRKLKKRDFRKMWIERINAGARQHEMT 64
Query: 76 YNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENLTN 119
Y+ F GL S ++++RK+L+ +A+++ F +V+ K ++N
Sbjct: 65 YSDFQRGLIASGVEINRKILSELAVSEPFSFKVLVDHSKNTVSN 108
>DICTYBASE|DDB_G0273295 [details] [associations]
symbol:DDB_G0273295 "39S ribosomal protein L20,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
dictyBase:DDB_G0273771 dictyBase:DDB_G0273295 HAMAP:MF_00382
GO:GO:0006412 GO:GO:0005840 EMBL:AAFI02000011 EMBL:AAFI02000009
GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
eggNOG:COG0292 OMA:MRTLWIS RefSeq:XP_644502.1 RefSeq:XP_644748.1
ProteinModelPortal:Q556W7 STRING:Q556W7 EnsemblProtists:DDB0203044
EnsemblProtists:DDB0217299 GeneID:8618848 GeneID:8619128
KEGG:ddi:DDB_G0273295 KEGG:ddi:DDB_G0273771 InParanoid:Q556W7
ProtClustDB:PTZ00030 Uniprot:Q556W7
Length = 122
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 42/104 (40%), Positives = 68/104 (65%)
Query: 16 KVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREHKMT 75
KV K AKG+FGR + +A++ V ++Y Y R+ KKR FR +WI RINA R+H+MT
Sbjct: 5 KVFKLAKGFFGRSKNCKSLARERVEKGLEYNYVSRKLKKRDFRKMWIERINAGARQHEMT 64
Query: 76 YNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKENLTN 119
Y+ F GL S ++++RK+L+ +A+++ F +V+ K ++N
Sbjct: 65 YSDFQRGLIASGVEINRKILSELAVSEPFSFKVLVDHSKNTVSN 108
>UNIPROTKB|F1RJD0 [details] [associations]
symbol:MRPL20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 OMA:GRRKNVW
GeneTree:ENSGT00390000015823 EMBL:FP102593 RefSeq:XP_003127555.3
Ensembl:ENSSSCT00000003716 GeneID:100511022 KEGG:ssc:100511022
Uniprot:F1RJD0
Length = 149
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 8 VTARA-RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRIN 66
VT R R ++VLK A+ + GR+N YR+A +AV A R RR KKR R+LWI+RI
Sbjct: 14 VTDRYWRVQEVLKHARHFRGRKNRCYRLAVRAVTRAFVKCTRARRLKKRSLRTLWINRIT 73
Query: 67 AAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
AA +EH + Y F+ L K ++L+RK+LA +AI + F S+
Sbjct: 74 AASQEHGLKYPAFIINLIKCQVELNRKVLADLAIYEPKTFKSL 116
>UNIPROTKB|E1BRV2 [details] [associations]
symbol:MRPL20 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 CTD:55052
GeneTree:ENSGT00390000015823 OMA:MRTLWIS EMBL:AADN02040864
IPI:IPI00573274 RefSeq:XP_001234297.1 UniGene:Gga.1933
Ensembl:ENSGALT00000002342 GeneID:770979 KEGG:gga:770979
NextBio:20921185 Uniprot:E1BRV2
Length = 149
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 13 RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREH 72
R ++VLK A+ + GR+N Y++A + V A + R R+ KKR R+LWI+RI AA EH
Sbjct: 20 RVQEVLKYARHFRGRKNRCYKLAVRNVQRAFVKSTRARKQKKRFLRALWITRIEAASLEH 79
Query: 73 KMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
+ Y+ F++ L K+ ++L+RK++A +AI + F S+
Sbjct: 80 GLKYSAFISNLFKTQVELNRKMIADLAIYEPKTFKSL 116
>UNIPROTKB|P0C447 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0005840 EMBL:AY522331 GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 ProteinModelPortal:P0C447
SMR:P0C447 PRIDE:P0C447 Gramene:P0C447 HOGENOM:HOG000035046
Genevestigator:P0C447 Uniprot:P0C447
Length = 119
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RV RG AR R K+ A + G + R+ Q V A ++RDR +KR FR L
Sbjct: 1 MTRVPRGYIARRRRAKMRSFASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRL 60
Query: 61 WISRINAAVREHKM--TYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
WISRINAA R HK+ Y+ ++ L K + L+RK+LA +A+ + +I N+IK
Sbjct: 61 WISRINAATRIHKVFDNYSKLIHNLYKKELILNRKILAQVAVLNSNNLYTISNKIK 116
>UNIPROTKB|P12139 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC;ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0005840 EMBL:X15901 EMBL:AY522330 GO:GO:0003735
GO:GO:0019843 ProtClustDB:CHL00068 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 PIR:JQ0249 RefSeq:NP_039409.1
ProteinModelPortal:P12139 SMR:P12139 STRING:P12139
EnsemblPlants:LOC_Os10g21314.1 EnsemblPlants:LOC_Osp1g00580.1
GeneID:3131425 KEGG:osa:3131425 Gramene:P12139 eggNOG:COG0292
KO:K02887 OMA:SNNLYTI Uniprot:P12139
Length = 119
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RV RG AR R K+ A + G + R+ Q V A ++RDR +KR FR L
Sbjct: 1 MTRVPRGYIARRRRAKMRSFASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRL 60
Query: 61 WISRINAAVREHKM--TYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
WISRINAA R HK+ Y+ ++ L K + L+RK+LA +A+ + +I N+IK
Sbjct: 61 WISRINAATRIHKVFDNYSKLIHNLYKKELILNRKILAQVAVLNSNNLYTISNKIK 116
>UNIPROTKB|P0C448 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0005840 EMBL:AY522329 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 ProteinModelPortal:P0C448 SMR:P0C448
Gramene:P0C448 Uniprot:P0C448
Length = 119
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RV RG AR R K+ A + G + R+ Q V A ++RDR +KR FR L
Sbjct: 1 MTRVPRGYIARRRRAKMRSFASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRL 60
Query: 61 WISRINAAVREHKM--TYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
WISRINAA R HK+ Y+ ++ L K + L+RK+LA +A+ + +I N+IK
Sbjct: 61 WISRINAATRIHKVFDNYSKLIHNLYKKELILNRKILAQVAVLNPNNLYTISNKIK 116
>UNIPROTKB|Q6ENF0 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:AP006728
RefSeq:YP_052773.1 ProteinModelPortal:Q6ENF0 SMR:Q6ENF0
GeneID:2885898 Gramene:Q6ENF0 ProtClustDB:CHL00068
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 Uniprot:Q6ENF0
Length = 119
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 47/116 (40%), Positives = 66/116 (56%)
Query: 1 MPRVKRGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSL 60
M RV RG AR R K+ A + G + R+ Q V A ++RDR +KR FR L
Sbjct: 1 MTRVPRGYIARRRRAKMRSFASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRL 60
Query: 61 WISRINAAVREHKM--TYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
WISRINAA R HK+ Y+ ++ L K + L+RK+LA +A+ + +I N+IK
Sbjct: 61 WISRINAATRIHKVFDNYSKLIHNLYKKELILNRKILAQVAVLNPNNLYTISNKIK 116
>UNIPROTKB|Q2TBR2 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9913 "Bos taurus" [GO:0005761 "mitochondrial ribosome"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 PDB:2FTC PDBsum:2FTC
EMBL:BC109775 IPI:IPI00692693 RefSeq:NP_001033595.1
UniGene:Bt.52937 ProteinModelPortal:Q2TBR2 STRING:Q2TBR2
PRIDE:Q2TBR2 Ensembl:ENSBTAT00000006406 GeneID:506358
KEGG:bta:506358 CTD:55052 GeneTree:ENSGT00390000015823
HOVERGEN:HBG058971 InParanoid:Q2TBR2 OMA:MRTLWIS OrthoDB:EOG4ZS94J
EvolutionaryTrace:Q2TBR2 NextBio:20867575 Uniprot:Q2TBR2
Length = 149
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 44/107 (41%), Positives = 66/107 (61%)
Query: 4 VKRGVTARA-RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWI 62
++ +T R R ++VLK A+ + GR+N YR+A +AV A R R KKR R+LWI
Sbjct: 10 LRNRITDRYWRVQEVLKHARHFRGRKNRCYRLAVRAVTRAFVRCTRARSLKKRHLRTLWI 69
Query: 63 SRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
+RI AA +EH + Y F+ L K ++L+RK+LA +AI + F S+
Sbjct: 70 NRITAASQEHGLKYPAFILNLIKCQVELNRKVLADLAIYEPKTFKSL 116
>UNIPROTKB|E2QZ57 [details] [associations]
symbol:MRPL20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 CTD:55052
GeneTree:ENSGT00390000015823 OMA:MRTLWIS EMBL:AAEX03003846
RefSeq:XP_536709.1 Ensembl:ENSCAFT00000030578 GeneID:479569
KEGG:cfa:479569 NextBio:20854737 Uniprot:E2QZ57
Length = 149
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 41/97 (42%), Positives = 62/97 (63%)
Query: 13 RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREH 72
R +KVL+ A+ + GR+N Y++A +AV A + RR KKR R+LWI+RI AA +EH
Sbjct: 20 RVQKVLQHARHFRGRKNRCYKLAVRAVTRAFVKCTKARRLKKRNMRTLWINRITAASQEH 79
Query: 73 KMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
+ Y F+ L K ++L+RK+LA +AI + F S+
Sbjct: 80 GLKYPAFIVNLIKCQVELNRKVLADLAIYEPKTFKSL 116
>MGI|MGI:2137221 [details] [associations]
symbol:Mrpl20 "mitochondrial ribosomal protein L20"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005761
"mitochondrial ribosome" evidence=ISO] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 MGI:MGI:2137221 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0005761 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 HOGENOM:HOG000035046 eggNOG:COG0292 OMA:GRRKNVW
CTD:55052 GeneTree:ENSGT00390000015823 HOVERGEN:HBG058971
OrthoDB:EOG4ZS94J HSSP:O67086 EMBL:AB049645 EMBL:AK004053
EMBL:AK011341 EMBL:AK015199 EMBL:AK168665 EMBL:BC039985
IPI:IPI00471157 RefSeq:NP_079846.1 UniGene:Mm.23825
ProteinModelPortal:Q9CQL4 SMR:Q9CQL4 STRING:Q9CQL4
PhosphoSite:Q9CQL4 PaxDb:Q9CQL4 PRIDE:Q9CQL4
Ensembl:ENSMUST00000030942 GeneID:66448 KEGG:mmu:66448
InParanoid:Q9CQL4 NextBio:321725 Bgee:Q9CQL4 CleanEx:MM_MRPL20
Genevestigator:Q9CQL4 GermOnline:ENSMUSG00000029066 Uniprot:Q9CQL4
Length = 149
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 41/97 (42%), Positives = 61/97 (62%)
Query: 13 RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREH 72
R ++VLK A+ + GR+N YR+A +AV A + RR KKR R+LWI+RI AA +EH
Sbjct: 20 RVQEVLKHAQHFRGRKNRCYRLAVRAVTRAFVKCTKARRLKKRNLRTLWINRITAASQEH 79
Query: 73 KMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
+ Y F+ L K ++L+RK+L +AI + F S+
Sbjct: 80 GLKYPAFIVNLIKCQVELNRKVLVDLAIYEPKTFKSL 116
>RGD|1588219 [details] [associations]
symbol:Mrpl20 "mitochondrial ribosomal protein L20"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005761 "mitochondrial ribosome"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR005813
Pfam:PF00453 PRINTS:PR00062 RGD:1588219 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0005761 EMBL:CH473968 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 HOGENOM:HOG000035046 eggNOG:COG0292 CTD:55052
GeneTree:ENSGT00390000015823 HOVERGEN:HBG058971 OMA:MRTLWIS
OrthoDB:EOG4ZS94J EMBL:BC166541 IPI:IPI00763487
RefSeq:NP_001102898.1 UniGene:Rn.2913 STRING:B2GV62
Ensembl:ENSRNOT00000025213 GeneID:680747 KEGG:rno:680747
NextBio:719420 Genevestigator:B2GV62 Uniprot:B2GV62
Length = 149
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/97 (42%), Positives = 59/97 (60%)
Query: 13 RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREH 72
R ++VLK A + GR+N YR+A +AV A RR KKR R+LWI+RI AA +EH
Sbjct: 20 RVQEVLKHAGHFRGRKNRCYRLAVRAVTRAFVKCTNSRRLKKRNLRTLWINRITAASQEH 79
Query: 73 KMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
+ Y F+ L K ++L+RK+L +AI + F S+
Sbjct: 80 GLQYPAFILNLVKCQVELNRKVLVDLAIYEPKTFKSL 116
>UNIPROTKB|Q9BYC9 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005761 "mitochondrial ribosome"
evidence=IDA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 EMBL:AB049644 GO:GO:0006412 EMBL:CH471183
GO:GO:0003735 GO:GO:0019843 EMBL:AL391244 GO:GO:0005761
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 OMA:GRRKNVW CTD:55052 HOVERGEN:HBG058971
OrthoDB:EOG4ZS94J EMBL:AK315794 EMBL:BC009515 EMBL:BC014316
EMBL:BC059945 IPI:IPI00013706 RefSeq:NP_060441.2 UniGene:Hs.182698
HSSP:O67086 ProteinModelPortal:Q9BYC9 SMR:Q9BYC9 IntAct:Q9BYC9
MINT:MINT-1419302 STRING:Q9BYC9 PhosphoSite:Q9BYC9 DMDM:74752447
PaxDb:Q9BYC9 PeptideAtlas:Q9BYC9 PRIDE:Q9BYC9
Ensembl:ENST00000344843 GeneID:55052 KEGG:hsa:55052 UCSC:uc001afo.4
GeneCards:GC01M001329 H-InvDB:HIX0000027 HGNC:HGNC:14478
HPA:HPA047074 MIM:611833 neXtProt:NX_Q9BYC9 PharmGKB:PA30950
InParanoid:Q9BYC9 PhylomeDB:Q9BYC9 GenomeRNAi:55052 NextBio:58521
Bgee:Q9BYC9 CleanEx:HS_MRPL20 Genevestigator:Q9BYC9
GermOnline:ENSG00000131586 Uniprot:Q9BYC9
Length = 149
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 41/107 (38%), Positives = 65/107 (60%)
Query: 4 VKRGVTARA-RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWI 62
++ VT R R ++VLK A+ + GR+N YR+A + V+ A + R KK+ R+LWI
Sbjct: 10 LRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLKKKNMRTLWI 69
Query: 63 SRINAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
+RI AA +EH + Y + L K ++L+RK+LA +AI + F S+
Sbjct: 70 NRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSL 116
>ZFIN|ZDB-GENE-030131-5299 [details] [associations]
symbol:mrpl20 "mitochondrial ribosomal protein
L20" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
ZFIN:ZDB-GENE-030131-5299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 CTD:55052 HOVERGEN:HBG058971 EMBL:BC122232
IPI:IPI00786560 RefSeq:NP_001038824.1 UniGene:Dr.75947
ProteinModelPortal:Q0P478 GeneID:751640 KEGG:dre:751640
NextBio:20917792 ArrayExpress:Q0P478 Uniprot:Q0P478
Length = 149
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 39/104 (37%), Positives = 64/104 (61%)
Query: 6 RGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRI 65
RG + +++LK A+ + GR++ Y +A +AV A YA + R+ K+R R LWI+RI
Sbjct: 13 RGPDRYWKVQELLKNARHFRGRKSRCYSLAVRAVRRAFVYASKARKAKRRSMRQLWITRI 72
Query: 66 NAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSI 109
AA REH + Y ++ L K S+ L+R++L ++IT+ F S+
Sbjct: 73 AAATREHGLKYPALVHQLLKCSVLLNRRMLCDLSITEPRSFLSL 116
>GENEDB_PFALCIPARUM|PF14_0709 [details] [associations]
symbol:PF14_0709 "ribosomal protein L20,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
EMBL:AE014187 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 ProtClustDB:PTZ00030 GO:GO:0000315
RefSeq:XP_001348883.1 ProteinModelPortal:Q8IK97
EnsemblProtists:PF14_0709:mRNA GeneID:812291 KEGG:pfa:PF14_0709
EuPathDB:PlasmoDB:PF3D7_1474100 OMA:LLYSYIM Uniprot:Q8IK97
Length = 121
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/98 (38%), Positives = 57/98 (58%)
Query: 17 VLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREHKMTY 76
V + AKG+ GR +++A+ M A+ Y+Y RR K R R WI+ IN A RE K TY
Sbjct: 8 VFQVAKGFRGRSKGCFKIARSRAMKALLYSYIMRRQKYRRLRVHWIASINRACREWKFTY 67
Query: 77 NTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
FMN L ++I L RK L ++ T+ + F ++++ K
Sbjct: 68 AHFMNSLLNNNILLSRKSLYNLCYTEPISFKCLIDESK 105
>UNIPROTKB|Q8IK97 [details] [associations]
symbol:PF14_0709 "Mitochondrial ribosomal protein L20,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
EMBL:AE014187 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 ProtClustDB:PTZ00030 GO:GO:0000315
RefSeq:XP_001348883.1 ProteinModelPortal:Q8IK97
EnsemblProtists:PF14_0709:mRNA GeneID:812291 KEGG:pfa:PF14_0709
EuPathDB:PlasmoDB:PF3D7_1474100 OMA:LLYSYIM Uniprot:Q8IK97
Length = 121
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/98 (38%), Positives = 57/98 (58%)
Query: 17 VLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREHKMTY 76
V + AKG+ GR +++A+ M A+ Y+Y RR K R R WI+ IN A RE K TY
Sbjct: 8 VFQVAKGFRGRSKGCFKIARSRAMKALLYSYIMRRQKYRRLRVHWIASINRACREWKFTY 67
Query: 77 NTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIK 114
FMN L ++I L RK L ++ T+ + F ++++ K
Sbjct: 68 AHFMNSLLNNNILLSRKSLYNLCYTEPISFKCLIDESK 105
>FB|FBgn0036335 [details] [associations]
symbol:mRpL20 "mitochondrial ribosomal protein L20"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 EMBL:AE014296
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 eggNOG:COG0292 CTD:55052
GeneTree:ENSGT00390000015823 OMA:MRTLWIS HSSP:O67086 EMBL:BT089020
RefSeq:NP_524051.1 UniGene:Dm.2752 SMR:Q9VU36 STRING:Q9VU36
EnsemblMetazoa:FBtr0075897 GeneID:39477 KEGG:dme:Dmel_CG11258
UCSC:CG11258-RA FlyBase:FBgn0036335 InParanoid:Q9VU36
OrthoDB:EOG4FXPQW GenomeRNAi:39477 NextBio:813845 Uniprot:Q9VU36
Length = 150
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 6 RGVTARARHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRI 65
RG R +++ K A Y R +VY A ++V A+ YA + R+ KK LW +R+
Sbjct: 13 RGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRALAYATKGRKLKKLDMAQLWSTRV 72
Query: 66 NAAVREHKMTYNTFMNGLKKSSIQLDRKLLASIAITDKLVFSSIVNQIKE 115
A +++ + TF GL +S I L++K+L+ +AI + F ++V +E
Sbjct: 73 EAGCQQYGVGLETFKEGLARSDILLNKKVLSDLAIWEPRSFEALVKISRE 122
>UNIPROTKB|B7Z746 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
EMBL:AL391244 PANTHER:PTHR10986 HGNC:HGNC:14478 EMBL:AK301440
IPI:IPI00922449 SMR:B7Z746 STRING:B7Z746 Ensembl:ENST00000482352
UCSC:uc010nyn.1 Uniprot:B7Z746
Length = 155
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 4 VKRGVTARA-RHKKVLKQAKGYFGRRNSVYRVAKQAVMHAMQYAYRDRRNKKRVFRSLWI 62
++ VT R R ++VLK A+ + GR+N YR+A + V+ A + R KK+ R+LWI
Sbjct: 10 LRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLKKKNMRTLWI 69
Query: 63 SRINAAVREHKMTYNTFMNGLKK 85
+RI AA +EH + Y + L K
Sbjct: 70 NRITAASQEHGLKYPALIGNLVK 92
>UNIPROTKB|I3L2X1 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:AL391244
PANTHER:PTHR10986 HGNC:HGNC:14478 Ensembl:ENST00000492508
Bgee:I3L2X1 Uniprot:I3L2X1
Length = 66
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 32 YRVAKQAVMHAMQYAYRDRRNKKRVFRSLWISRINAAVREHKMTYNTFMNGLKKS 86
YR+A + V+ A + R KK+ R+LWI+RI AA +EH + Y + L K+
Sbjct: 3 YRLAVRTVIRAFVKCTKARYLKKKNMRTLWINRITAASQEHGLKYPALIGNLVKA 57
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.132 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 122 122 0.00091 102 3 10 22 0.41 30
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 588 (63 KB)
Total size of DFA: 149 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.81u 0.09s 16.90t Elapsed: 00:00:02
Total cpu time: 16.81u 0.09s 16.90t Elapsed: 00:00:02
Start: Thu Aug 15 13:40:53 2013 End: Thu Aug 15 13:40:55 2013