Query psy958
Match_columns 137
No_of_seqs 102 out of 272
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 23:17:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy958.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/958hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i4a_A N(G),N(G)-dimethylargin 99.8 9.8E-21 3.3E-25 156.9 11.2 108 16-126 106-220 (308)
2 2ci1_A NG, NG-dimethylarginine 99.8 2E-18 6.9E-23 138.8 10.3 104 16-122 76-186 (275)
3 1h70_A NG, NG-dimethylarginine 99.8 1.3E-18 4.5E-23 139.0 8.5 102 17-122 72-183 (255)
4 1s9r_A Arginine deiminase; hyd 99.7 7.1E-17 2.4E-21 138.2 5.9 103 17-122 166-289 (410)
5 1bwd_A ADT, protein (inosamine 99.6 7.2E-16 2.5E-20 128.7 5.9 104 16-122 112-247 (348)
6 4e4j_A Arginine deiminase; L-a 99.6 1E-15 3.5E-20 131.1 6.6 102 17-120 190-312 (433)
7 2a9g_A Arginine deiminase; arg 99.6 1.5E-15 5.2E-20 129.8 5.8 103 17-122 171-298 (418)
8 1jdw_A L-arginine\:glycine ami 99.6 2.4E-15 8.1E-20 129.6 5.2 103 17-121 175-322 (423)
9 2ewo_A Putative agmatine deimi 97.8 4.5E-05 1.5E-09 65.3 7.6 91 27-121 130-241 (377)
10 2jer_A Agmatine deiminase; hyd 97.5 0.00012 4.2E-09 62.9 6.2 92 27-122 126-238 (389)
11 1xkn_A Putative peptidyl-argin 97.4 0.00046 1.6E-08 58.6 7.5 91 27-122 126-237 (355)
12 1zbr_A AAQ65385, conserved hyp 94.3 0.048 1.6E-06 46.1 4.9 74 45-120 130-226 (349)
13 1xkn_A Putative peptidyl-argin 93.1 0.28 9.7E-06 41.4 7.6 65 32-98 243-328 (355)
14 1zbr_A AAQ65385, conserved hyp 92.1 0.2 7E-06 42.2 5.4 67 31-98 233-319 (349)
15 2jer_A Agmatine deiminase; hyd 90.6 0.67 2.3E-05 39.7 7.1 30 73-102 321-356 (389)
16 2ewo_A Putative agmatine deimi 89.6 0.61 2.1E-05 39.7 6.1 30 73-102 325-360 (377)
17 3hvm_A Agmatine deiminase; hyd 88.4 0.54 1.8E-05 39.5 4.8 67 33-102 229-323 (330)
18 3h7c_X Agmatine deiminase; str 83.0 0.92 3.1E-05 38.8 3.7 28 71-98 326-355 (383)
19 1xhj_A Nitrogen fixation prote 66.8 5.1 0.00017 27.6 3.3 30 70-99 52-82 (88)
20 3ff4_A Uncharacterized protein 60.5 8.1 0.00028 27.4 3.5 58 66-123 7-70 (122)
21 3hvm_A Agmatine deiminase; hyd 59.8 13 0.00045 31.0 5.2 83 35-117 170-284 (330)
22 3h7c_X Agmatine deiminase; str 50.9 43 0.0015 28.4 7.0 80 38-121 142-243 (383)
23 1h70_A NG, NG-dimethylarginine 44.0 1E+02 0.0034 23.6 7.7 86 29-121 30-132 (255)
24 2c1l_A Restriction endonucleas 39.9 15 0.00052 30.9 2.4 59 62-120 63-123 (358)
25 1jdw_A L-arginine\:glycine ami 33.0 62 0.0021 27.4 5.2 58 37-98 325-396 (423)
26 3ju3_A Probable 2-oxoacid ferr 29.6 62 0.0021 22.2 3.9 41 62-104 12-54 (118)
27 2ci1_A NG, NG-dimethylarginine 28.8 2E+02 0.0067 22.1 8.0 85 32-120 37-136 (275)
28 3i4a_A N(G),N(G)-dimethylargin 28.4 2.3E+02 0.0077 22.7 8.1 86 32-121 67-167 (308)
29 4fbl_A LIPS lipolytic enzyme; 27.0 38 0.0013 25.1 2.6 39 59-99 45-88 (281)
30 1wgl_A TOLL-interacting protei 22.3 70 0.0024 20.1 2.8 20 74-93 7-26 (59)
31 1veh_A NIFU-like protein hirip 21.4 35 0.0012 23.4 1.3 26 70-95 59-86 (92)
32 1qgu_B Protein (nitrogenase mo 20.5 1.4E+02 0.0047 25.7 5.2 63 24-88 219-306 (519)
No 1
>3i4a_A N(G),N(G)-dimethylarginine dimethylaminohydrolase 1; DDAH, nitric oxide synthase regulation, acetylation, metal-binding, zinc; HET: LN5; 1.90A {Homo sapiens} PDB: 3i2e_A* 3p8e_A* 3p8p_A*
Probab=99.84 E-value=9.8e-21 Score=156.89 Aligned_cols=108 Identities=25% Similarity=0.414 Sum_probs=96.2
Q ss_pred ccccceeeeCcC-CCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeCCcEEee------ecCccccHHHHHHHHHhCC
Q psy958 16 RFDDHFIEKCDK-YLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFT------GISKWTNEKGARAVADSFP 88 (137)
Q Consensus 16 ~~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~t------GlS~RTN~eGa~~La~~fp 88 (137)
+..+..+++ ++ .++|++|...++++|+ ++|.+ +++++++++++||||||++ |+|.|||.+|+++|++.|+
T Consensus 106 vi~~~vii~-~m~~~~Rr~E~~~~~~~l~-~~g~~-i~~~~~~~~~lEGGDvl~~g~~v~vG~s~RTn~~gi~~l~~~l~ 182 (308)
T 3i4a_A 106 VCEETALIT-RPGAPSRRKEVDMMKEALE-KLQLN-IVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFK 182 (308)
T ss_dssp EETTEEEEC-CCSSGGGGGGHHHHHHHHH-TTTCE-EEECCCTTCCCCGGGEEECSSCEEEEESSSCCHHHHHHHHHHTT
T ss_pred EECCEEEEe-CCCchhhhhhHHHHHHHHH-HCCCe-EEEccCCCCcCccceEEEECCEEEEEEchhcCHHHHHHHHHHcC
Confidence 345667777 66 8999999999999999 88988 9998854599999999987 9999999999999999999
Q ss_pred CCCeEEEeCCCCCCCccccccccCCeEEEEcCchhhhc
Q psy958 89 EYPCTAIKVKNKNPKAKMSTSTGIDQLLVRTQVEMFLN 126 (137)
Q Consensus 89 ~y~V~~V~v~~~LHLK~~vs~lg~~~llv~~~~~~~~~ 126 (137)
+|+|+++++..++|||++|+++++++++++.+...+..
T Consensus 183 ~~~Vv~v~~~~~~HLDt~~~~l~~~~~lv~~~~~~~~~ 220 (308)
T 3i4a_A 183 DYAVSTVPVADGLHLKSFCSMAGPNLIAIGSSESAQKA 220 (308)
T ss_dssp TSCEEEEECCTTCCGGGSEEEEETTEEEEECSHHHHHH
T ss_pred CCeEEEEECCCccChhheEEeeCCCEEEEECchhcHHH
Confidence 99999999999999999999999999999987655443
No 2
>2ci1_A NG, NG-dimethylarginine dimethylaminohydrolase 1; NOS regulation, S-nitrosylation, zinc, MMA, ADMA, acetylation, metal-binding; HET: KOR K1R CIT; 1.08A {Bos taurus} PDB: 2c6z_A* 2ci3_A 2ci4_A 2ci5_A* 2ci6_A 2ci7_A 2jaj_A* 2jai_A*
Probab=99.76 E-value=2e-18 Score=138.83 Aligned_cols=104 Identities=25% Similarity=0.439 Sum_probs=92.2
Q ss_pred ccccceeeeCcC-CCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeCCcEEee------ecCccccHHHHHHHHHhCC
Q psy958 16 RFDDHFIEKCDK-YLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFT------GISKWTNEKGARAVADSFP 88 (137)
Q Consensus 16 ~~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~t------GlS~RTN~eGa~~La~~fp 88 (137)
++++..+++ ++ .++|++|...++++++ .+|++ ++.+.++++++|||||+++ |.|.|||++|+++|++.|+
T Consensus 76 v~~~~~~~~-~~~~~~R~~E~~~~~~~~~-~~g~~-~~~~~~~~~~lEGGdv~~~g~~~~vg~s~Rt~~~~~~~l~~~l~ 152 (275)
T 2ci1_A 76 VXEETALIT-RPGAPSRRKEADMMKEALE-KLQLN-IVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFK 152 (275)
T ss_dssp EETTEEEEC-CCSSGGGTTHHHHHHHHHH-HTTCE-EEECCCTTCCCCGGGEEECSSEEEEEESSSCCHHHHHHHHHHCT
T ss_pred EeCCceEEe-cCCcccccccHHHHHHHHH-HcCCC-EEEecCCCceEccccEEEECCEEEEEecCCCCHHHHHHHHHhcC
Confidence 455666776 65 7999999999999999 89987 7776654589999999987 9999999999999999999
Q ss_pred CCCeEEEeCCCCCCCccccccccCCeEEEEcCch
Q psy958 89 EYPCTAIKVKNKNPKAKMSTSTGIDQLLVRTQVE 122 (137)
Q Consensus 89 ~y~V~~V~v~~~LHLK~~vs~lg~~~llv~~~~~ 122 (137)
+|+|+.+++.+.+||||+|+++++++++++.+..
T Consensus 153 ~~~V~~l~~~~~~HlD~~~~~~~~~~~~~~~~~~ 186 (275)
T 2ci1_A 153 DYAVSTVPVVDALHLKSFCSMAGPNLIAIGSSES 186 (275)
T ss_dssp TSEEEEEECCSSSSGGGSEEEEETTEEEEECSHH
T ss_pred CCeEEEeeCCCCcChhhhccccCCCEEEEECchh
Confidence 9999999998899999999999999999997643
No 3
>1h70_A NG, NG-dimethylarginine dimethylaminohydrolase; DDAH, nitric oxide synthase inhibitor; HET: CIR; 1.8A {Pseudomonas aeruginosa} SCOP: d.126.1.3 PDB: 3rhy_A 3bpb_A*
Probab=99.76 E-value=1.3e-18 Score=139.03 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=91.9
Q ss_pred cccceeeeCcC-CCCcHHhHHHHHHHHHhccC-CCceEEccCCCceeeCCcEEee------ecCccccHHHHHHHHHhCC
Q psy958 17 FDDHFIEKCDK-YLGNFIYVDTVRAIIKKELR-PPQVLDIEDEEAKLDGSDVLFT------GISKWTNEKGARAVADSFP 88 (137)
Q Consensus 17 ~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~lg-~~~i~~i~~p~gtlEGGDVL~t------GlS~RTN~eGa~~La~~fp 88 (137)
+.+..+++ ++ .++|++|...++++++ +++ .+ +.+++.| +++|||||+++ |.|.|||++|+++|++.|+
T Consensus 72 ~~~~~~~~-~m~~~~R~~E~~~~~~~l~-~~g~~~-v~~~~~~-~~lEGGdv~~~g~~~~vg~s~Rt~~~~~~~l~~~l~ 147 (255)
T 1h70_A 72 TSRCAIIT-RPGAESRRGETEIIEETVQ-RFYPGK-VERIEAP-GTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILE 147 (255)
T ss_dssp CSSCEEEC-BCSSGGGTTHHHHHHHHHH-HHSTTC-EEECCTT-CCBCGGGEEEETTEEEEEECSSSCHHHHHHHHHHHH
T ss_pred ECCcEEEe-CCCChHHhchHHHHHHHHH-HcCCCc-EEEeCCC-ceEecceEEEECCEEEEEEccCCcHHHHHHHHHHHh
Confidence 45666666 66 7899999999999999 888 88 8888886 99999999988 9999999999999999997
Q ss_pred --CCCeEEEeCCCCCCCccccccccCCeEEEEcCch
Q psy958 89 --EYPCTAIKVKNKNPKAKMSTSTGIDQLLVRTQVE 122 (137)
Q Consensus 89 --~y~V~~V~v~~~LHLK~~vs~lg~~~llv~~~~~ 122 (137)
+|+|+.+++.+..|||++++++++++++++....
T Consensus 148 ~~g~~vi~~~~~~~~HlD~~~~~v~~~~~~~~~~~~ 183 (255)
T 1h70_A 148 KHGLSGSVVRLEKVLHLKTGLAYLEHNNLLAAGEFV 183 (255)
T ss_dssp HTTCEEEEEECSSSSSGGGSEEECSTTEEEECGGGT
T ss_pred hCCCEEEEEECCCCcchhheeeecCCCEEEEECCcC
Confidence 8999999997799999999999999999987653
No 4
>1s9r_A Arginine deiminase; hydrolase, 5-fold pseudo-symmetric domain, 5- helix bundle domain, raction intermediate; HET: ARG; 1.60A {Mycoplasma arginini} SCOP: d.126.1.4 PDB: 1lxy_A*
Probab=99.65 E-value=7.1e-17 Score=138.20 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=86.5
Q ss_pred cccceeeeCcC-CCCcHHhHHHHHHHHHhcc----CCCceEEccCCCceeeCCcEEee-------ecCccccHHHHHHHH
Q psy958 17 FDDHFIEKCDK-YLGNFIYVDTVRAIIKKEL----RPPQVLDIEDEEAKLDGSDVLFT-------GISKWTNEKGARAVA 84 (137)
Q Consensus 17 ~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~l----g~~~i~~i~~p~gtlEGGDVL~t-------GlS~RTN~eGa~~La 84 (137)
..+..+++ .+ .++|++|+..++.+++ .+ +.+.++....+ +++||||||++ |+|.|||.+|+++|+
T Consensus 166 ig~gv~i~-~m~~~~Rr~E~~~~~~i~~-~~p~f~~~~~~~~~~~~-~~lEGGDvl~lg~~~v~vG~S~RTn~~gi~~la 242 (410)
T 1s9r_A 166 VGNGVTIH-YMRYKVRQRETLFSRFVFS-NHPKLINTPWYYDPSLK-LSIEGGDVFIYNNDTLVVGVSERTDLQTVTLLA 242 (410)
T ss_dssp EBTEEEEC-CCSSHHHHTTHHHHHHHHH-HCTTTTTCCEEECGGGC-SCCCGGGEEECSSSEEEEEESSSCCHHHHHHHH
T ss_pred ECCEEEEe-CCCChHHcCcHHHHHHHHH-hChhhcCCCeEEecCCC-CcccCcceEEECCCEEEEEECccCCHHHHHHHH
Confidence 34556666 55 7999999999999998 76 77734676664 99999999987 999999999999999
Q ss_pred HhC-C-C----CCeEEEeCC---CCCCCccccccccCCeEEEEcCch
Q psy958 85 DSF-P-E----YPCTAIKVK---NKNPKAKMSTSTGIDQLLVRTQVE 122 (137)
Q Consensus 85 ~~f-p-~----y~V~~V~v~---~~LHLK~~vs~lg~~~llv~~~~~ 122 (137)
+.| + + ++|++|+++ ..+||||+|+++++++++++..-.
T Consensus 243 ~~l~~~g~~~~~~V~~v~~p~~~~~mHLDtvft~l~~~~~~v~p~~~ 289 (410)
T 1s9r_A 243 KNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIAN 289 (410)
T ss_dssp HHHHHCTTCCCCEEEEEECCCBTTBCSGGGTEEECSSSEEEECGGGT
T ss_pred HHhhhccCccceEEEEEEccCCccccchhheeeeccCCeEEEccccc
Confidence 997 4 3 579999986 489999999999999999987763
No 5
>1bwd_A ADT, protein (inosamine-phosphate amidinotransferase); streptomycin; 3.10A {Streptomyces griseus} SCOP: d.126.1.2
Probab=99.59 E-value=7.2e-16 Score=128.74 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=86.2
Q ss_pred ccccceeeeCcC-CCCcHHhHHHHHHHHHhcc----------------------CCCceE-EccCCCceeeCCcEEee--
Q psy958 16 RFDDHFIEKCDK-YLGNFIYVDTVRAIIKKEL----------------------RPPQVL-DIEDEEAKLDGSDVLFT-- 69 (137)
Q Consensus 16 ~~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~l----------------------g~~~i~-~i~~p~gtlEGGDVL~t-- 69 (137)
+..+..+++ ++ .++|++|...++.+|+ ++ +.+ +. .+.++++++|||||+++
T Consensus 112 vi~~~vi~~-~m~~~~R~~E~~~~~~~l~-~~~~~g~~w~~~p~p~~~~~~~d~~~~-~~~~~~~~~~~lEGGdv~~~g~ 188 (348)
T 1bwd_A 112 SVGQTIIET-PMALRSRFLESLAYKDLLL-EYFASGSRWLSAPKPRLTDDSYAPQAP-AGERLTDEEPVFDAANVLRFGT 188 (348)
T ss_dssp ESSSEEEEC-CCSSGGGTTGGGGGHHHHH-HHHTTTCEEEECCCCCCCGGGBCTTSC-TTCSBCSSSCCBCGGGEEEETT
T ss_pred EECCcEEEc-CCCChhhhhhHHHHHHHHH-HHhhcccccccCCCccccccccccCCc-ceeeccCCceeEecceEEEECC
Confidence 345667777 66 8999999999999998 54 233 21 23433489999999987
Q ss_pred ----ecCccccHHHHHHHHHhCC-CCCeEEEeCC-CCCCCccccccccCCeEEEEcCch
Q psy958 70 ----GISKWTNEKGARAVADSFP-EYPCTAIKVK-NKNPKAKMSTSTGIDQLLVRTQVE 122 (137)
Q Consensus 70 ----GlS~RTN~eGa~~La~~fp-~y~V~~V~v~-~~LHLK~~vs~lg~~~llv~~~~~ 122 (137)
|.|.|||++|+++|++.|. +|+|+.++++ ...|||++++++++++++++....
T Consensus 189 ~~~vg~s~Rt~~~~ie~l~~~l~~~~~v~~~~~~~~~~HlDt~~~~v~~~~vl~~~~~~ 247 (348)
T 1bwd_A 189 DLLYLVSDSGNELGAKWLQSAVGDTYTVHPCRKLYASTHVDSTIVPLRPGLVLTNPSRV 247 (348)
T ss_dssp EEEEECBTTBCHHHHHHHHHHHCTTSEEEEESSSCCSSCGGGTEEEEETTEEEECTTTC
T ss_pred EEEEEecccCCHHHHHHHHHHhcCCcEEEEecCCCCCcchhheEEecCCCEEEEeCCCC
Confidence 9999999999999999996 7999999987 579999999999999999987653
No 6
>4e4j_A Arginine deiminase; L-arginine, L-citrulline, NH3, hydrolase; 2.30A {Mycoplasma penetrans}
Probab=99.59 E-value=1e-15 Score=131.10 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=80.1
Q ss_pred cccceeeeCcC-CCCcHHhHHHHHHHHHhcc----CCCceEEccCCCceeeCCcEEee-------ecCccccHHHHHHHH
Q psy958 17 FDDHFIEKCDK-YLGNFIYVDTVRAIIKKEL----RPPQVLDIEDEEAKLDGSDVLFT-------GISKWTNEKGARAVA 84 (137)
Q Consensus 17 ~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~l----g~~~i~~i~~p~gtlEGGDVL~t-------GlS~RTN~eGa~~La 84 (137)
+.+..+++ ++ .++|++|...++.+++ .+ +.+.+.....+++++||||||+. |.|.|||.+|+++|+
T Consensus 190 i~~gvii~-~m~~~~Rr~E~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~lEGGDvl~l~~~~l~iG~s~RTn~~gie~La 267 (433)
T 4e4j_A 190 MGNGVSIN-CMKYPTRKREVIFSRFVFT-NNPKYKNTPRYFDIVGNNGTIEGGDIFIYNSKTLVIGNSERTNFAAIESVA 267 (433)
T ss_dssp EBTEEEEC-CCSSHHHHTTHHHHHHHHH-HCTTTTTCCEEECSSSSCSCCCGGGEEECSSSEEEEEESSSCCHHHHHHHH
T ss_pred EcCeEEEc-CCCChHHcCcHHHHHHHHH-cChhhcCCceEEeccCCCceEecceEEEECCCEEEEEecccChHHHHHHHH
Confidence 45566777 66 8999999999999998 54 45523344333599999999986 899999999999999
Q ss_pred HhCCC------CCeEEEeCC---CCCCCccccccccCCeEEEEcC
Q psy958 85 DSFPE------YPCTAIKVK---NKNPKAKMSTSTGIDQLLVRTQ 120 (137)
Q Consensus 85 ~~fp~------y~V~~V~v~---~~LHLK~~vs~lg~~~llv~~~ 120 (137)
+.|.. ..++.++++ .++||||+|+++++++++++..
T Consensus 268 ~~L~~~~~~~~~~v~~~~~~~~~~~mHLDt~ft~ld~d~~li~p~ 312 (433)
T 4e4j_A 268 KNIQANKDCTFERIVVINVPPMPNLMHLDTWLTMLDYDKFLYSPN 312 (433)
T ss_dssp HHHHTCSSCCCCEEEEEECCCCTTCCSHHHHEEECSSSEEEECTT
T ss_pred HHHhhcCceeEEEEEeecccCCccceecCceEEEeCCCeEEEchh
Confidence 98752 234555553 6899999999999999998764
No 7
>2a9g_A Arginine deiminase; arginine degradation pathway, catalyti mechanism, hydrolase; HET: ARG; 2.30A {Pseudomonas aeruginosa} SCOP: d.126.1.4 PDB: 1rxx_A 2abr_A* 2aci_A 2aaf_A*
Probab=99.57 E-value=1.5e-15 Score=129.81 Aligned_cols=103 Identities=14% Similarity=0.040 Sum_probs=83.5
Q ss_pred cccceeeeCcC-CCCcHHhHHHHHHHHHhcc------CCCceE----EccCCCceeeCCcEEee-------ecCccccHH
Q psy958 17 FDDHFIEKCDK-YLGNFIYVDTVRAIIKKEL------RPPQVL----DIEDEEAKLDGSDVLFT-------GISKWTNEK 78 (137)
Q Consensus 17 ~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~l------g~~~i~----~i~~p~gtlEGGDVL~t-------GlS~RTN~e 78 (137)
..+..+++ .+ .++|++|...++.+++ .+ +++..+ .... ++++||||||++ |+|.|||.+
T Consensus 171 i~~~vii~-~m~~~~Rr~E~~~~~~i~~-~~~~f~~~~~~~~~~~p~~~~~-~~~lEGGDvl~~g~~~llvG~s~RTn~~ 247 (418)
T 2a9g_A 171 IYGGVTLN-PMYWPARRQETLLTTAIYK-FHPEFANAEFEIWYGDPDKDHG-SSTLEGGDVMPIGNGVVLIGMGERSSRQ 247 (418)
T ss_dssp CSSEEEEC-CCSSGGGTTHHHHHHHHHH-HSTTTTTCCCEEEEECTTSCCT-TCCCCGGGEECCSSSEEEEEESSSSCHH
T ss_pred ECCeEEEe-CCCChHhcccHHHHHHHHH-hChhhhccCCcEEeccccCcCC-CCcEecceEEEECCceEEEEcCCcCCHH
Confidence 34556666 55 7999999999999998 65 333113 3344 489999999977 999999999
Q ss_pred HHHHHHHhC-CC--C-CeEEEeCCC---CCCCccccccccCCeEEEEcCch
Q psy958 79 GARAVADSF-PE--Y-PCTAIKVKN---KNPKAKMSTSTGIDQLLVRTQVE 122 (137)
Q Consensus 79 Ga~~La~~f-p~--y-~V~~V~v~~---~LHLK~~vs~lg~~~llv~~~~~ 122 (137)
|+++|++.| ++ | +|+.+++.+ .+|||++|+++++++++++....
T Consensus 248 ~ie~l~~~l~~~g~~~~V~~l~~~~~~~~~HLDt~~~~l~~~~~~~~~~~~ 298 (418)
T 2a9g_A 248 AIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVV 298 (418)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEECCCCSSCCCHHHHEEEEETTEEEECHHHH
T ss_pred HHHHHHHHhcCCCCccEEEEEecCCCCCCcChhheeEecCCCEEEEECCcc
Confidence 999999998 53 7 899999873 89999999999999999987653
No 8
>1jdw_A L-arginine\:glycine amidinotransferase; creatine biosynthesis, catalytic triad, reaction mechanism, novel fold, fivefold pseudosymmetry; 1.90A {Homo sapiens} SCOP: d.126.1.2 PDB: 2jdw_A 3jdw_A* 4jdw_A* 8jdw_A 5jdw_A 6jdw_A* 1jdx_A* 7jdw_A 9jdw_A* 2jdx_A
Probab=99.55 E-value=2.4e-15 Score=129.62 Aligned_cols=103 Identities=18% Similarity=0.167 Sum_probs=84.8
Q ss_pred cccceeeeCcC-CCCcHHhHHHHHHHHHhccCCCceEEccCC-----------------------------------Cce
Q psy958 17 FDDHFIEKCDK-YLGNFIYVDTVRAIIKKELRPPQVLDIEDE-----------------------------------EAK 60 (137)
Q Consensus 17 ~~~~~~~~~~~-~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p-----------------------------------~gt 60 (137)
..+..+++ .+ .++|++|...++++|+ +++.....++..| +++
T Consensus 175 ig~~vii~-~m~~~~Rr~E~~~~~~il~-~~~~~~~~~~~~P~p~~~d~~~d~~~~i~~~~~~~~~~~~~~~~~~e~e~~ 252 (423)
T 1jdw_A 175 VGNEIIEA-PMAWRSRFFEYRAYRSIIK-DYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAAQGKFVTTEFEPC 252 (423)
T ss_dssp EBTEEEEC-CBSCGGGTTGGGGTHHHHH-HHHHTTCEEEECCCCCCCGGGBCTTCCCSSHHHHHHHHHHTCCSBCSSSCC
T ss_pred ECCeEEEc-CCCchhhcccHHHHHHHHH-HhcccCceeeecCccccccccccccccccccccccccccccccccccccce
Confidence 45566777 55 7999999999999998 6543212333222 378
Q ss_pred eeCCcEEee------ecCccccHHHHHHHHHhCC-CCCeEEEeCCC--CCCCccccccccCCeEEEEcCc
Q psy958 61 LDGSDVLFT------GISKWTNEKGARAVADSFP-EYPCTAIKVKN--KNPKAKMSTSTGIDQLLVRTQV 121 (137)
Q Consensus 61 lEGGDVL~t------GlS~RTN~eGa~~La~~fp-~y~V~~V~v~~--~LHLK~~vs~lg~~~llv~~~~ 121 (137)
+|||||+++ |.|.|||++|+++|++.|. +|+|+.+++.+ ..|||++|+++++++++++...
T Consensus 253 lEGGDvl~~G~~llvg~s~Rtn~~~ie~L~~~L~~~~~Vi~l~~~d~~~~HLDtv~~~v~~~~vlv~~~~ 322 (423)
T 1jdw_A 253 FDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMHIDATFNIIGPGIVLSNPDR 322 (423)
T ss_dssp BCGGGEEEETTEEEECCCSSCCHHHHHHHHHHHTTTCEEEECCBSSCCSSCSTTTEEEEETTEEEECTTS
T ss_pred eecceeEEeCCEEEEEecccCCHHHHHHHHHHhCCCCEEEEEecCCCCCCchhheEEecCCCeEEEecch
Confidence 999999987 9999999999999999998 89999999863 7999999999999999998654
No 9
>2ewo_A Putative agmatine deiminase; Q8DW17, SMR6, X-RAY, structural genomics, PSI, protein structure initiative; 2.90A {Streptococcus mutans} SCOP: d.126.1.6
Probab=97.81 E-value=4.5e-05 Score=65.25 Aligned_cols=91 Identities=9% Similarity=-0.056 Sum_probs=70.6
Q ss_pred CCCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeCCcEEee-------ecC-----cc----ccHHHHHHHHHhCCCC
Q psy958 27 KYLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFT-------GIS-----KW----TNEKGARAVADSFPEY 90 (137)
Q Consensus 27 ~~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~t-------GlS-----~R----TN~eGa~~La~~fp~y 90 (137)
++..+..|-..-+++++ .+|++ ++... + ..+|||+|... +.| +| |.++..++|++.|.-.
T Consensus 130 ~~~~~~~D~~v~~~~~~-~~g~~-~~~~~-~-~vlEGGsi~~dG~GTlltTe~clLn~nRNp~lsk~eie~~Lk~~LG~~ 205 (377)
T 2ewo_A 130 LYFPWDQDALVARKVCE-IEGVD-SYKTK-D-FVLEGGSIHVDGEGTVLVTEMCLLHPSRNPHLTKEDIEDKLKDYLNCV 205 (377)
T ss_dssp SSSCCTTHHHHHHHHHH-TTTCC-EEEEE-E-EECCGGGEEEETTTEEEEEHHHHTSTTSCTTSCHHHHHHHHHHHHCCS
T ss_pred cccCccchhHHHHHHHH-HcCCC-eEecC-C-eEEcCCceEECCCceEEEEcccccCCCCCCccCHHHHHHHHHHHcCCC
Confidence 56778888888888887 89998 76533 2 89999999876 222 47 5666669999999666
Q ss_pred CeEEEeC----C-CCCCCccccccccCCeEEEEcCc
Q psy958 91 PCTAIKV----K-NKNPKAKMSTSTGIDQLLVRTQV 121 (137)
Q Consensus 91 ~V~~V~v----~-~~LHLK~~vs~lg~~~llv~~~~ 121 (137)
+|+-+|- + ...|+|+.+++++|+++|+....
T Consensus 206 kvIWL~~gl~~DdTdgHiD~~arfv~p~~vl~~~~~ 241 (377)
T 2ewo_A 206 KVLWVKDGIDPYETNGHIDDVACFIRPGEVACIYTD 241 (377)
T ss_dssp EEEEECCCSCTTTTSSCSTTTEEEEETTEEEEBCCC
T ss_pred EEEEcCCccCCCCCCCchhheeEEeCCCEEEEEecC
Confidence 7887772 2 46899999999999999998643
No 10
>2jer_A Agmatine deiminase; hydrolase, tetramer, AGDI, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct; HET: AGT; 1.65A {Enterococcus faecalis} SCOP: d.126.1.6
Probab=97.53 E-value=0.00012 Score=62.89 Aligned_cols=92 Identities=8% Similarity=-0.058 Sum_probs=70.1
Q ss_pred CCCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeCCcEEee-------ecC-----cc----ccHHHHHHHHHhCCCC
Q psy958 27 KYLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFT-------GIS-----KW----TNEKGARAVADSFPEY 90 (137)
Q Consensus 27 ~~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~t-------GlS-----~R----TN~eGa~~La~~fp~y 90 (137)
++..+..+-..-+++++ .+|++ ++.... ..+|||+|.+. +.| +| |.++..++|++.|.-.
T Consensus 126 ~~~~~~~D~~v~~~~~~-~~g~~-~~~~~~--~vlEGGsi~~DG~GTlltTe~clLn~nRNP~lsk~eiE~~Lk~~LGv~ 201 (389)
T 2jer_A 126 LYFPWDQDDLVAQKICE-IEHVD-SYRTDD--FVLEGGSFHVDGQGTVLTTEMCLLSEGRNPQLSKEAIEQKLCDYLNVE 201 (389)
T ss_dssp SSSCCTTGGGHHHHHHH-HHTCC-EEEEEE--EECCGGGEEECSSSEEEEEHHHHTSTTTCTTSCHHHHHHHHHHHHTCS
T ss_pred cccCccchHHHHHHHHH-HcCCC-eEecCC--eEEccCcEEECCCceEEEEeeeecCCCCCCCcCHHHHHHHHHHHcCCC
Confidence 46667777777788887 89998 765332 89999999876 222 57 5666669999999767
Q ss_pred CeEEEeC----C-CCCCCccccccccCCeEEEEcCch
Q psy958 91 PCTAIKV----K-NKNPKAKMSTSTGIDQLLVRTQVE 122 (137)
Q Consensus 91 ~V~~V~v----~-~~LHLK~~vs~lg~~~llv~~~~~ 122 (137)
+|+-+|- + ...|+|+.+++++|+++|+....+
T Consensus 202 kvIWL~~Gl~~DdTdgHID~~arFv~p~~vl~~~~~d 238 (389)
T 2jer_A 202 KVLWLGDGIDPEETNGHVDDVACFIAPGEVACIYTED 238 (389)
T ss_dssp EEEEECCCSCTTTTSSCGGGTEEEEETTEEEEECCCC
T ss_pred EEEEcCCcCCCCCCCCchhheeEEeCCCEEEEEecCC
Confidence 7888872 2 458999999999999999987533
No 11
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=97.35 E-value=0.00046 Score=58.58 Aligned_cols=91 Identities=8% Similarity=0.011 Sum_probs=66.6
Q ss_pred CCCCcHHhHHHHHHHHHhccCCCceEEccCCCceeeCCcEEee-------ecC-----cc----ccHHHHHHHHHhCCCC
Q psy958 27 KYLGNFIYVDTVRAIIKKELRPPQVLDIEDEEAKLDGSDVLFT-------GIS-----KW----TNEKGARAVADSFPEY 90 (137)
Q Consensus 27 ~~~SR~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~t-------GlS-----~R----TN~eGa~~La~~fp~y 90 (137)
+++.-..+-..-+++.+ .+|++ +... + ..+|||+|.+. +.| .| |.++..++|++.|.-.
T Consensus 126 k~~~~~~D~~v~~~~~~-~~g~~-~~~~--~-~vlEGG~i~~dG~GTlltT~~clLn~nRNp~ls~~~ie~~L~~~LG~~ 200 (355)
T 1xkn_A 126 KYEPYDDDNAVPERVAK-AQGLP-MVST--G-MVLEGGAIDVNGAGLLLTTTACLLNPNRNPSLGKAEIEAQLRRYLGIE 200 (355)
T ss_dssp TSSCCHHHHHHHHHHHH-HHTCC-EEEE--E-EECCGGGEEECSSSEEEEEHHHHTCTTTCTTCCHHHHHHHHHHHHCCS
T ss_pred cCccCchHHHHHHHHHH-HcCCC-eecC--C-eEEccCcEEECCCceEEEEeeeecCCCCCCCCCHHHHHHHHHHHcCCc
Confidence 46534445455555555 78988 7663 2 89999999876 222 57 5666669999999666
Q ss_pred CeEEEe----CC-CCCCCccccccccCCeEEEEcCch
Q psy958 91 PCTAIK----VK-NKNPKAKMSTSTGIDQLLVRTQVE 122 (137)
Q Consensus 91 ~V~~V~----v~-~~LHLK~~vs~lg~~~llv~~~~~ 122 (137)
+|+-+| -+ ...|+|+.+++++|+++|+....+
T Consensus 201 ~viwL~~Gl~~DdtdgHiD~~arfv~p~~vl~~~~~d 237 (355)
T 1xkn_A 201 KVLWLGDGIAGDDTDGHVDDMARFVNENTVVIAVEED 237 (355)
T ss_dssp EEEEECCCCTTCTTSSCGGGTEEEEETTEEEEECCCC
T ss_pred EEEEeCCccCCCCCCcchhheeEeeCCCEEEEEcCCC
Confidence 788888 22 468999999999999999987643
No 12
>1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6
Probab=94.33 E-value=0.048 Score=46.06 Aligned_cols=74 Identities=5% Similarity=-0.005 Sum_probs=55.7
Q ss_pred ccCCCceEE-ccCCCceeeCCcEEee-------e----cC-cc----ccHHHHHHHHHhCCCCCeEEEe---CC---CCC
Q psy958 45 ELRPPQVLD-IEDEEAKLDGSDVLFT-------G----IS-KW----TNEKGARAVADSFPEYPCTAIK---VK---NKN 101 (137)
Q Consensus 45 ~lg~~~i~~-i~~p~gtlEGGDVL~t-------G----lS-~R----TN~eGa~~La~~fp~y~V~~V~---v~---~~L 101 (137)
.+|++ ++. +..+ ..+|||++... + ++ .| |.++..++|++.|-=-+|+-+| +. ...
T Consensus 130 ~~g~~-~~~~~~~~-~vlEGGsi~~dG~GTlltTe~clLn~nRNp~ls~~eie~~L~~~LGv~kviWL~~G~l~~DdTdg 207 (349)
T 1zbr_A 130 LFAEG-VTLDNRLA-FVLEGGALETDGEGTLLTTDSCLFEPNRNAGLSRTAIIDTLKESLGVSRVLSLRHGALAGDDTDG 207 (349)
T ss_dssp CBCTT-CEEEEEEE-EECCGGGCCBCSSSEEEEEHHHHTCTTTSTTSCHHHHHHHHHHHSCCSEEEEESSCCCTTCCSSS
T ss_pred hcCCc-eeeecCCC-EEEcCCcEEECCCceEEEeeeeeecCCcCCCCCHHHHHHHHHHHhCCcEEEEecCCccCCCCcCc
Confidence 68888 633 2443 89999998766 1 22 36 8899999999999434577777 32 357
Q ss_pred CCccccccccCCeEEEEcC
Q psy958 102 PKAKMSTSTGIDQLLVRTQ 120 (137)
Q Consensus 102 HLK~~vs~lg~~~llv~~~ 120 (137)
|+|+.+.+++|+++++...
T Consensus 208 HiD~larFv~p~~vl~~~~ 226 (349)
T 1zbr_A 208 HIDTLARFVDTRTIVYVRS 226 (349)
T ss_dssp CGGGSEEEEETTEEEEEEC
T ss_pred chhheEEecCCCEEEEEcC
Confidence 9999999999999998863
No 13
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=93.13 E-value=0.28 Score=41.43 Aligned_cols=65 Identities=11% Similarity=0.158 Sum_probs=44.4
Q ss_pred HHhHHHHHHHHHhc------cCCCceEEccCCCce---------------eeCCcEEeeecCccccHHHHHHHHHhCCCC
Q psy958 32 FIYVDTVRAIIKKE------LRPPQVLDIEDEEAK---------------LDGSDVLFTGISKWTNEKGARAVADSFPEY 90 (137)
Q Consensus 32 ~gE~~~i~~~L~k~------lg~~~i~~i~~p~gt---------------lEGGDVL~tGlS~RTN~eGa~~La~~fp~y 90 (137)
....+.+.+.|+ . .++. |++++.|+.. +-.|-|++---....|++..++|++.||++
T Consensus 243 y~~~~~~~~~L~-~~~da~Gr~~~-ii~lp~p~~~~~~g~rl~asY~Nfli~Ng~VivP~fgd~~D~~A~~~L~~~fP~r 320 (355)
T 1xkn_A 243 YKPLRENYELLK-TMTGLDGKPLN-IVKLPMPEPVYYDGERLPASYANFYIANTVVLVPTYRCPRDQQAIDILQQCFPKR 320 (355)
T ss_dssp HHHHHHHHHHHT-TCBCTTSCBCE-EEEECCCSCCEETTEECCCCTTCCEECSSEEEEEECSSTHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHH-hhhhccCCceE-EEEeCCCCccccCCCcccceeeEEEEECCEEEEeeCCCcccHHHHHHHHHHCCCC
Confidence 445677888887 4 2456 8999887332 222222222222345999999999999999
Q ss_pred CeEEEeCC
Q psy958 91 PCTAIKVK 98 (137)
Q Consensus 91 ~V~~V~v~ 98 (137)
+|++|+..
T Consensus 321 ~Vi~v~~~ 328 (355)
T 1xkn_A 321 EVVGIDCS 328 (355)
T ss_dssp EEEEEECT
T ss_pred EEEEeeHH
Confidence 99999986
No 14
>1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6
Probab=92.10 E-value=0.2 Score=42.21 Aligned_cols=67 Identities=16% Similarity=0.249 Sum_probs=45.0
Q ss_pred cHHhHHHHHHHHHhc-----cCCCceEEccCCCceeeCCc---------------EEeeecCccccHHHHHHHHHhCCCC
Q psy958 31 NFIYVDTVRAIIKKE-----LRPPQVLDIEDEEAKLDGSD---------------VLFTGISKWTNEKGARAVADSFPEY 90 (137)
Q Consensus 31 R~gE~~~i~~~L~k~-----lg~~~i~~i~~p~gtlEGGD---------------VL~tGlS~RTN~eGa~~La~~fp~y 90 (137)
.....+++.+.|++. .++. |++++.|+..-+.|+ |++---....++++.++|++.||++
T Consensus 233 ~y~~~~~~~~~L~~~~da~Gr~~~-ii~lp~p~~~~~~g~rl~asY~Nfli~Ng~VivP~fgd~~D~~A~~~l~~~fP~r 311 (349)
T 1zbr_A 233 HYSDLTAMEQELKELRRPDGQPYR-LVPLPMAEALYDGADRLPATYANFLIINGAVLVPTYDSHLDAVALSVMQGLFPDR 311 (349)
T ss_dssp THHHHHHHHHHHHHCBCTTSCBCE-EEEEECCCCCEETTEECCCCSSCCEEETTEEEEEECSSTTTTHHHHHHHHHCTTS
T ss_pred cHHHHHHHHHHHHhhhhccCCceE-EEEeCCCCccccCCCcccceeeEEEEECCEEEEeeCCCcccHHHHHHHHHHCCCC
Confidence 355667788888731 3466 888887633222222 2222122334999999999999999
Q ss_pred CeEEEeCC
Q psy958 91 PCTAIKVK 98 (137)
Q Consensus 91 ~V~~V~v~ 98 (137)
+|++|+..
T Consensus 312 ~Vv~i~~~ 319 (349)
T 1zbr_A 312 EVIGIDCR 319 (349)
T ss_dssp EEEEEECH
T ss_pred EEEEeeHH
Confidence 99999975
No 15
>2jer_A Agmatine deiminase; hydrolase, tetramer, AGDI, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct; HET: AGT; 1.65A {Enterococcus faecalis} SCOP: d.126.1.6
Probab=90.58 E-value=0.67 Score=39.66 Aligned_cols=30 Identities=10% Similarity=0.136 Sum_probs=26.0
Q ss_pred ccccHHHHHHHHHhCCCCCeEEEeCC------CCCC
Q psy958 73 KWTNEKGARAVADSFPEYPCTAIKVK------NKNP 102 (137)
Q Consensus 73 ~RTN~eGa~~La~~fp~y~V~~V~v~------~~LH 102 (137)
...+++..++|++.||+++|++|+.. +.+|
T Consensus 321 d~~D~~A~~~L~~~fP~r~Vi~v~~~~i~~gGG~iH 356 (389)
T 2jer_A 321 DENDRLALEQVQTMFPDKKIVGVNTVEVVYGGGNIH 356 (389)
T ss_dssp CTTHHHHHHHHHHHSTTSEEEEEECHHHHTTTCCTG
T ss_pred CchhHHHHHHHHHHCCCCEEEEeeHHHHHhcCCCCe
Confidence 34599999999999999999999975 5666
No 16
>2ewo_A Putative agmatine deiminase; Q8DW17, SMR6, X-RAY, structural genomics, PSI, protein structure initiative; 2.90A {Streptococcus mutans} SCOP: d.126.1.6
Probab=89.65 E-value=0.61 Score=39.66 Aligned_cols=30 Identities=10% Similarity=0.270 Sum_probs=25.9
Q ss_pred ccccHHHHHHHHHhCCCCCeEEEeCC------CCCC
Q psy958 73 KWTNEKGARAVADSFPEYPCTAIKVK------NKNP 102 (137)
Q Consensus 73 ~RTN~eGa~~La~~fp~y~V~~V~v~------~~LH 102 (137)
...+++..++|++.||+++|++|+.. +.+|
T Consensus 325 d~~D~~A~~~L~~~fP~r~Vi~v~~~~i~~gGG~iH 360 (377)
T 2ewo_A 325 DENDQLAKQQVQEMFPDRKVVGVRTEEIAYGGGNIH 360 (377)
T ss_dssp CTTHHHHHHHHHHHSTTSEEEEECTHHHHTTSCCTT
T ss_pred ChhhHHHHHHHHHHCCCCEEEEeeHHHHHhcCCCCe
Confidence 35689999999999999999999975 5666
No 17
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=88.43 E-value=0.54 Score=39.47 Aligned_cols=67 Identities=7% Similarity=0.095 Sum_probs=45.5
Q ss_pred HhHHHHHHHHHhcc----C--CCceEEccCCCcee-eCCcEE--------------ee-ecCccccHHHHHHHHHhCCCC
Q psy958 33 IYVDTVRAIIKKEL----R--PPQVLDIEDEEAKL-DGSDVL--------------FT-GISKWTNEKGARAVADSFPEY 90 (137)
Q Consensus 33 gE~~~i~~~L~k~l----g--~~~i~~i~~p~gtl-EGGDVL--------------~t-GlS~RTN~eGa~~La~~fp~y 90 (137)
...+++.+.|+ .. | +. |++++.|+... +.|+-| ++ -..+.+++++.++|++.||+
T Consensus 229 ~~~~~~~~~L~-~~~da~Gr~~~-i~~lp~P~~~~~~~g~rl~aSY~Nfli~Ng~VivP~fgd~~D~~A~~~l~~~fP~- 305 (330)
T 3hvm_A 229 TALKKMQEELK-TFKKLDKTPYK-LIPLEIPKAIFDENQQRLPATYVNFLLCNDALIVPTYNDPKDALILETLKQHTPL- 305 (330)
T ss_dssp HHHHHHHHHHH-HCBCTTSCBCE-EEEEECCSCCBCTTCCBCCCCTTCCEEETTEEEEEECSCTTHHHHHHHHHTTCSS-
T ss_pred HHHHHHHHHHH-hhhhccCCceE-EEEeCCCCccccCCCCCcccchhheeeECCEEEEecCCChHHHHHHHHHHHhCCC-
Confidence 45677888887 43 3 45 88888872222 133322 11 23345799999999999999
Q ss_pred CeEEEeCC------CCCC
Q psy958 91 PCTAIKVK------NKNP 102 (137)
Q Consensus 91 ~V~~V~v~------~~LH 102 (137)
+|++|+.. +.+|
T Consensus 306 ~Vv~i~~~~i~~~gG~iH 323 (330)
T 3hvm_A 306 EVIGVDCNTLIKQHGSLH 323 (330)
T ss_dssp EEEEEECHHHHHTTCCGG
T ss_pred CEEEEEhHHHHhCCCccE
Confidence 99999975 5566
No 18
>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} SCOP: d.126.1.6 PDB: 1vkp_A* 2q3u_A* 3h7k_A*
Probab=83.05 E-value=0.92 Score=38.81 Aligned_cols=28 Identities=18% Similarity=0.437 Sum_probs=24.0
Q ss_pred cCcc-ccHHHHHHHHHhCCCCCeEEEe-CC
Q psy958 71 ISKW-TNEKGARAVADSFPEYPCTAIK-VK 98 (137)
Q Consensus 71 lS~R-TN~eGa~~La~~fp~y~V~~V~-v~ 98 (137)
.-+. +++++.++|++.||+++|++|+ ..
T Consensus 326 fgd~~~D~~A~~~l~~~fP~R~Vv~I~~~~ 355 (383)
T 3h7c_X 326 FGDPIRDKEAIRVLSDTFPHHSVVGIENAR 355 (383)
T ss_dssp CCCTTHHHHHHHHHHHHCTTSEEEEETTTH
T ss_pred CCCcccHHHHHHHHHHHCCCCEEEeCccHH
Confidence 3354 7899999999999999999999 54
No 19
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=66.84 E-value=5.1 Score=27.55 Aligned_cols=30 Identities=17% Similarity=0.062 Sum_probs=21.0
Q ss_pred ecCccccHHHHH-HHHHhCCCCCeEEEeCCC
Q psy958 70 GISKWTNEKGAR-AVADSFPEYPCTAIKVKN 99 (137)
Q Consensus 70 GlS~RTN~eGa~-~La~~fp~y~V~~V~v~~ 99 (137)
..|+-|=+.|++ .|++.+|+...+..-.++
T Consensus 52 pss~~TLk~gIE~~L~~~vPev~~V~~v~~~ 82 (88)
T 1xhj_A 52 PSSTITLKAGIERALHEEVPGVIEVEQVFLE 82 (88)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCCEEEEEECC
T ss_pred cchHHHHHHHHHHHHHHhCCCceEEEecccc
Confidence 366678889998 577889987665544433
No 20
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=60.50 E-value=8.1 Score=27.37 Aligned_cols=58 Identities=14% Similarity=0.031 Sum_probs=43.1
Q ss_pred EEeeecCccccHHHHHHHHHhCC-CCCeEEEeCC--CCCCCcccccccc---CCeEEEEcCchh
Q psy958 66 VLFTGISKWTNEKGARAVADSFP-EYPCTAIKVK--NKNPKAKMSTSTG---IDQLLVRTQVEM 123 (137)
Q Consensus 66 VL~tGlS~RTN~eGa~~La~~fp-~y~V~~V~v~--~~LHLK~~vs~lg---~~~llv~~~~~~ 123 (137)
|.++|.|.+...-|...++.... +|+|.||.-+ +.+-++|+=+..+ +|.++++-+++.
T Consensus 7 iAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p~~~ 70 (122)
T 3ff4_A 7 TLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYINPQN 70 (122)
T ss_dssp EEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSCHHH
T ss_pred EEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeCHHH
Confidence 55669999999999999998887 8999998654 4455666544322 688888777654
No 21
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=59.82 E-value=13 Score=30.97 Aligned_cols=83 Identities=17% Similarity=0.178 Sum_probs=46.3
Q ss_pred HHHHHHHHHhccCCCceEEccCC-------CceeeC-------CcEEeeecCccc--cH----HHHHHHHHhCC--C--C
Q psy958 35 VDTVRAIIKKELRPPQVLDIEDE-------EAKLDG-------SDVLFTGISKWT--NE----KGARAVADSFP--E--Y 90 (137)
Q Consensus 35 ~~~i~~~L~k~lg~~~i~~i~~p-------~gtlEG-------GDVL~tGlS~RT--N~----eGa~~La~~fp--~--y 90 (137)
.+.|++.|++.||.++|+.++.. +||+|+ |=|++.--.+.. |- +-.++|++.-- | |
T Consensus 170 k~eiE~~L~~~LGv~kviWL~~G~l~~DdTdgHID~larFv~p~~v~~~~~~d~~d~~y~~~~~~~~~L~~~~da~Gr~~ 249 (330)
T 3hvm_A 170 QNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLDKDTIVYSACEDKNDEHYTALKKMQEELKTFKKLDKTPY 249 (330)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCCCCTTCCSSCCGGGTEEEEETTEEEEEECCCTTSTTHHHHHHHHHHHHHCBCTTSCBC
T ss_pred HHHHHHHHHHHhCCCEEEEECCCCcCCCCCCccchheeEecCCCEEEEEcCCCCCCccHHHHHHHHHHHHhhhhccCCce
Confidence 34588889867999999999851 334332 222222222222 32 33344444432 3 9
Q ss_pred CeEEEeCCCCCC------C-ccccccc-cCCeEEE
Q psy958 91 PCTAIKVKNKNP------K-AKMSTST-GIDQLLV 117 (137)
Q Consensus 91 ~V~~V~v~~~LH------L-K~~vs~l-g~~~llv 117 (137)
+|+++|.++-+. | -|++|++ .++.+++
T Consensus 250 ~i~~lp~P~~~~~~~g~rl~aSY~Nfli~Ng~Viv 284 (330)
T 3hvm_A 250 KLIPLEIPKAIFDENQQRLPATYVNFLLCNDALIV 284 (330)
T ss_dssp EEEEEECCSCCBCTTCCBCCCCTTCCEEETTEEEE
T ss_pred EEEEeCCCCccccCCCCCcccchhheeeECCEEEE
Confidence 999999874333 2 4677755 4454444
No 22
>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} SCOP: d.126.1.6 PDB: 1vkp_A* 2q3u_A* 3h7k_A*
Probab=50.86 E-value=43 Score=28.45 Aligned_cols=80 Identities=11% Similarity=0.087 Sum_probs=52.5
Q ss_pred HHHHHHhccCCCceEEccCCCceeeCCcEEeee-----------cC-ccc---cHHHHHH-HHHhCCCCCeEEEe--CC-
Q psy958 38 VRAIIKKELRPPQVLDIEDEEAKLDGSDVLFTG-----------IS-KWT---NEKGARA-VADSFPEYPCTAIK--VK- 98 (137)
Q Consensus 38 i~~~L~k~lg~~~i~~i~~p~gtlEGGDVL~tG-----------lS-~RT---N~eGa~~-La~~fp~y~V~~V~--v~- 98 (137)
|...|.+..+++ ++..+ -.+|||-|-+.| ++ .|- +++-|++ |++.|-=-+|+=+| +.
T Consensus 142 va~~v~~~~g~~-~~~~~---lVlEGGsIe~DG~GTlltTe~cLLn~nRNP~lsk~eIE~~L~~~LGv~kvIWL~~Gl~g 217 (383)
T 3h7c_X 142 VSRKILALERIP-RFQHS---MILEGGSIHVDGEGTCLVTEECLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYG 217 (383)
T ss_dssp HHHHHHHHHTCC-EEEEE---EECCGGGEEECSSSEEEEEHHHHTCTTTCTTSCHHHHHHHHHHHHCCCEEEEESCCCTT
T ss_pred HHHHHHHHhCCC-cccCC---eeecCCcEEECCCceEEEEhhhccCCCCCCCCCHHHHHHHHHHHhCCcEEEEeCCCcCC
Confidence 333343267777 65532 688998887762 22 122 3556655 88888545777777 32
Q ss_pred ---CCCCCccccccccCCeEEEEcCc
Q psy958 99 ---NKNPKAKMSTSTGIDQLLVRTQV 121 (137)
Q Consensus 99 ---~~LHLK~~vs~lg~~~llv~~~~ 121 (137)
--=|.|+.+.++.|+++|+....
T Consensus 218 DddTdgHID~larFv~pg~Vl~~~~~ 243 (383)
T 3h7c_X 218 DEDTNGHIDNMCCFARPGVVLLSWTD 243 (383)
T ss_dssp CGGGTCCGGGTEEEEETTEEEEEECC
T ss_pred CCCcCcceeeeEEecCCCEEEEEccC
Confidence 13499999999999999987643
No 23
>1h70_A NG, NG-dimethylarginine dimethylaminohydrolase; DDAH, nitric oxide synthase inhibitor; HET: CIR; 1.8A {Pseudomonas aeruginosa} SCOP: d.126.1.3 PDB: 3rhy_A 3bpb_A*
Probab=44.01 E-value=1e+02 Score=23.63 Aligned_cols=86 Identities=6% Similarity=0.007 Sum_probs=54.0
Q ss_pred CCcHHhHHHHHHHHHhccCCCceEEccCC-----------Cc-eeeCCcEEee--ecCccccHHHHHHHHHhCC--C-CC
Q psy958 29 LGNFIYVDTVRAIIKKELRPPQVLDIEDE-----------EA-KLDGSDVLFT--GISKWTNEKGARAVADSFP--E-YP 91 (137)
Q Consensus 29 ~SR~gE~~~i~~~L~k~lg~~~i~~i~~p-----------~g-tlEGGDVL~t--GlS~RTN~eGa~~La~~fp--~-y~ 91 (137)
+.=+.|-+.+.++|+ +.|.+ |+.++.. .+ ++.|| ++.. +..+|-.+. ..++..|. + ++
T Consensus 30 ~~A~~e~~~~~~~L~-~~Gv~-V~~l~~~~~~Pd~vF~rD~~~~~~~~-~~~~~m~~~~R~~E~--~~~~~~l~~~g~~~ 104 (255)
T 1h70_A 30 AKALEQHNAYIRALQ-TCDVD-ITLLPPDERFPDSVFVEDPVLCTSRC-AIITRPGAESRRGET--EIIEETVQRFYPGK 104 (255)
T ss_dssp HHHHHHHHHHHHHHT-TSSCE-EEEECCCTTCTTTTCTTTTEEECSSC-EEECBCSSGGGTTHH--HHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHH-HcCCE-EEEcCCcccCcCcEeecCcEEEECCc-EEEeCCCChHHhchH--HHHHHHHHHcCCCc
Confidence 334579999999999 99988 8888752 12 33333 5555 777777665 35555554 4 66
Q ss_pred eEEEeCCCCCCCccccccccCCeEEEEcCc
Q psy958 92 CTAIKVKNKNPKAKMSTSTGIDQLLVRTQV 121 (137)
Q Consensus 92 V~~V~v~~~LHLK~~vs~lg~~~llv~~~~ 121 (137)
+..+ ....+|...--+...+.++++.|.
T Consensus 105 v~~~--~~~~~lEGGdv~~~g~~~~vg~s~ 132 (255)
T 1h70_A 105 VERI--EAPGTVEAGDIMMVGDHFYIGESA 132 (255)
T ss_dssp EEEC--CTTCCBCGGGEEEETTEEEEEECS
T ss_pred EEEe--CCCceEecceEEEECCEEEEEEcc
Confidence 6643 333677664444445558888763
No 24
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=39.90 E-value=15 Score=30.87 Aligned_cols=59 Identities=19% Similarity=0.144 Sum_probs=41.0
Q ss_pred eCCcEEee-ecCccccHHHHHHHHHhCC-CCCeEEEeCCCCCCCccccccccCCeEEEEcC
Q psy958 62 DGSDVLFT-GISKWTNEKGARAVADSFP-EYPCTAIKVKNKNPKAKMSTSTGIDQLLVRTQ 120 (137)
Q Consensus 62 EGGDVL~t-GlS~RTN~eGa~~La~~fp-~y~V~~V~v~~~LHLK~~vs~lg~~~llv~~~ 120 (137)
.||-|..+ |=|.+-+-...+.+.+.+. |..|..|..+..+|=|++...-.+...||..|
T Consensus 63 ~Ggkv~~IlGgstsQrlTSKQavEElL~cGvev~IiNrkRi~HaK~Yg~~~n~g~~LIV~S 123 (358)
T 2c1l_A 63 QGGRVIAILGGSTSQRLSSRQVVEELLNRGVEVHIINRKRILHAKLYGTSNNLGESLVVSS 123 (358)
T ss_dssp TTCEEEEEEECCSSSCCBBHHHHHHHHHTTCEEEEEECSSCBCCEEEEEEETTEEEEEEES
T ss_pred cCCcEEEEEcccccccccHHHHHHHHHhcCCceEEeeeeeecchhhhcccCCCceEEEEec
Confidence 47777766 6333333333445555565 88899999889999999998877777666554
No 25
>1jdw_A L-arginine\:glycine amidinotransferase; creatine biosynthesis, catalytic triad, reaction mechanism, novel fold, fivefold pseudosymmetry; 1.90A {Homo sapiens} SCOP: d.126.1.2 PDB: 2jdw_A 3jdw_A* 4jdw_A* 8jdw_A 5jdw_A 6jdw_A* 1jdx_A* 7jdw_A 9jdw_A* 2jdx_A
Probab=33.02 E-value=62 Score=27.36 Aligned_cols=58 Identities=5% Similarity=-0.003 Sum_probs=37.8
Q ss_pred HHHHHHHhccCCCceEEccCCCce----------eeCCcEEeee----cCccccHHHHHHHHHhCCCCCeEEEeCC
Q psy958 37 TVRAIIKKELRPPQVLDIEDEEAK----------LDGSDVLFTG----ISKWTNEKGARAVADSFPEYPCTAIKVK 98 (137)
Q Consensus 37 ~i~~~L~k~lg~~~i~~i~~p~gt----------lEGGDVL~tG----lS~RTN~eGa~~La~~fp~y~V~~V~v~ 98 (137)
.+.++|+ +.++. +++++.|+.. -.+..+|.++ +....|....++|++. |++|++|++.
T Consensus 325 ~~~~~L~-~~~~~-iI~~p~~~~~~~~~~~~s~~~~~~N~L~inpg~VI~~~~~~~~~~~L~~~--G~~Vi~v~~~ 396 (423)
T 1jdw_A 325 HQIDLFK-KAGWT-IITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKL--GITTIKVNIR 396 (423)
T ss_dssp TTHHHHH-HTTCE-EECCCCCCCCTTSCCSSSCGGGGGCCEEEETTEEEEETTCHHHHHHHHHT--TCEEEEECCH
T ss_pred HHHHHHH-hCCCE-EEECCCchhccccccccccccceeeEEEECCCEEEEeCCCHHHHHHHHHC--CCEEEEecHH
Confidence 4556777 66777 8888875322 0144444431 2223578888899887 9999999985
No 26
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=29.65 E-value=62 Score=22.21 Aligned_cols=41 Identities=15% Similarity=0.150 Sum_probs=30.6
Q ss_pred eCCcEEee--ecCccccHHHHHHHHHhCCCCCeEEEeCCCCCCCc
Q psy958 62 DGSDVLFT--GISKWTNEKGARAVADSFPEYPCTAIKVKNKNPKA 104 (137)
Q Consensus 62 EGGDVL~t--GlS~RTN~eGa~~La~~fp~y~V~~V~v~~~LHLK 104 (137)
||.|++++ |-+.++=.+.++.|++. |+++.-+.+.-..+|+
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~--Gi~v~vi~~r~~~P~d 54 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEE--GISANLLYLKMFSPFP 54 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHT--TCCEEEEEECSSCSCC
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHC--CCceEEEEECeEecCC
Confidence 68899877 88889999999999874 6777766665444443
No 27
>2ci1_A NG, NG-dimethylarginine dimethylaminohydrolase 1; NOS regulation, S-nitrosylation, zinc, MMA, ADMA, acetylation, metal-binding; HET: KOR K1R CIT; 1.08A {Bos taurus} PDB: 2c6z_A* 2ci3_A 2ci4_A 2ci5_A* 2ci6_A 2ci7_A 2jaj_A* 2jai_A*
Probab=28.83 E-value=2e+02 Score=22.09 Aligned_cols=85 Identities=12% Similarity=0.119 Sum_probs=51.6
Q ss_pred HHhHHHHHHHHHhccCCCceEEccCCC-----------ceeeCCcEEee--ecCccccHHHHHHHHHhCC--CCCeEEEe
Q psy958 32 FIYVDTVRAIIKKELRPPQVLDIEDEE-----------AKLDGSDVLFT--GISKWTNEKGARAVADSFP--EYPCTAIK 96 (137)
Q Consensus 32 ~gE~~~i~~~L~k~lg~~~i~~i~~p~-----------gtlEGGDVL~t--GlS~RTN~eGa~~La~~fp--~y~V~~V~ 96 (137)
+.|-+.+.++|+++.|.+ |+.++..+ +.+=||-++.. +..+|-.+. ..++..|. ++++...+
T Consensus 37 ~~e~~~~~~~L~~~~Gv~-V~~l~~~~~~Pd~vF~rD~~~v~~~~~~~~~~~~~~R~~E~--~~~~~~~~~~g~~~~~~~ 113 (275)
T 2ci1_A 37 ERQHQLYVGVLGSKLGLQ-VVQLPADESLPDCVFVEDVAVVXEETALITRPGAPSRRKEA--DMMKEALEKLQLNIVEMK 113 (275)
T ss_dssp HHHHHHHHHHHHTTTCCE-EEEECCCTTCTTTTCGGGGEEEETTEEEECCCSSGGGTTHH--HHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHhccCcE-EEEeCCCCCCCCceeccceEEEeCCceEEecCCcccccccH--HHHHHHHHHcCCCEEEec
Confidence 479999999997248888 88877431 22334444444 677776664 44445554 44443221
Q ss_pred CCCCCCCccccccccCCeEEEEcC
Q psy958 97 VKNKNPKAKMSTSTGIDQLLVRTQ 120 (137)
Q Consensus 97 v~~~LHLK~~vs~lg~~~llv~~~ 120 (137)
+...+|...=-+...++++++.+
T Consensus 114 -~~~~~lEGGdv~~~g~~~~vg~s 136 (275)
T 2ci1_A 114 -DENATLDGGDVLFTGREFFVGLS 136 (275)
T ss_dssp -CTTCCCCGGGEEECSSEEEEEES
T ss_pred -CCCceEccccEEEECCEEEEEec
Confidence 23467875544455559999986
No 28
>3i4a_A N(G),N(G)-dimethylarginine dimethylaminohydrolase 1; DDAH, nitric oxide synthase regulation, acetylation, metal-binding, zinc; HET: LN5; 1.90A {Homo sapiens} PDB: 3i2e_A* 3p8e_A* 3p8p_A*
Probab=28.42 E-value=2.3e+02 Score=22.65 Aligned_cols=86 Identities=10% Similarity=0.093 Sum_probs=52.8
Q ss_pred HHhHHHHHHHHHhccCCCceEEccCCCce-----------eeCCcEEee--ecCccccHHHHHHHHHhCC--CCCeEEEe
Q psy958 32 FIYVDTVRAIIKKELRPPQVLDIEDEEAK-----------LDGSDVLFT--GISKWTNEKGARAVADSFP--EYPCTAIK 96 (137)
Q Consensus 32 ~gE~~~i~~~L~k~lg~~~i~~i~~p~gt-----------lEGGDVL~t--GlS~RTN~eGa~~La~~fp--~y~V~~V~ 96 (137)
+.|.+.+.++|++++|+. |++++.++++ .-|+-|++. +...|-.+.- .++..|. ++++..++
T Consensus 67 ~~q~~~l~~~Lr~~~Gv~-V~~l~~~~~~Pd~vF~rD~~~vi~~~vii~~m~~~~Rr~E~~--~~~~~l~~~g~~i~~~~ 143 (308)
T 3i4a_A 67 ERQHQLYVGVLGSKLGLQ-VVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVD--MMKEALEKLQLNIVEMK 143 (308)
T ss_dssp HHHHHHHHHHHHTTTCCE-EEEECCCTTCTTTTCGGGGEEEETTEEEECCCSSGGGGGGHH--HHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHHhhcCCCE-EEEcCCCCCCCCeEeecCeEEEECCEEEEeCCCchhhhhhHH--HHHHHHHHCCCeEEEcc
Confidence 358999999996368888 9888753222 223335555 7777777654 4666665 55655433
Q ss_pred CCCCCCCccccccccCCeEEEEcCc
Q psy958 97 VKNKNPKAKMSTSTGIDQLLVRTQV 121 (137)
Q Consensus 97 v~~~LHLK~~vs~lg~~~llv~~~~ 121 (137)
....+|...=-+...+.++++.|.
T Consensus 144 -~~~~~lEGGDvl~~g~~v~vG~s~ 167 (308)
T 3i4a_A 144 -DENATLDGGDVLFTGREFFVGLSK 167 (308)
T ss_dssp -CTTCCCCGGGEEECSSCEEEEESS
T ss_pred -CCCCcCccceEEEECCEEEEEEch
Confidence 134577664333344568888664
No 29
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=27.04 E-value=38 Score=25.11 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=26.4
Q ss_pred ceeeCCc--EEee-ecCccccHHHHHHHHHhCC--CCCeEEEeCCC
Q psy958 59 AKLDGSD--VLFT-GISKWTNEKGARAVADSFP--EYPCTAIKVKN 99 (137)
Q Consensus 59 gtlEGGD--VL~t-GlS~RTN~eGa~~La~~fp--~y~V~~V~v~~ 99 (137)
-.++||+ ||++ |.++... -.+.+++.|. ||.|+.+.+.+
T Consensus 45 ~~~~G~~~~VlllHG~~~s~~--~~~~la~~La~~Gy~Via~Dl~G 88 (281)
T 4fbl_A 45 LYSVGSRIGVLVSHGFTGSPQ--SMRFLAEGFARAGYTVATPRLTG 88 (281)
T ss_dssp EEECCSSEEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEECCCTT
T ss_pred cccCCCCceEEEECCCCCCHH--HHHHHHHHHHHCCCEEEEECCCC
Confidence 4678988 5555 8765332 2556666664 89999998863
No 30
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=22.28 E-value=70 Score=20.07 Aligned_cols=20 Identities=25% Similarity=0.393 Sum_probs=16.2
Q ss_pred cccHHHHHHHHHhCCCCCeE
Q psy958 74 WTNEKGARAVADSFPEYPCT 93 (137)
Q Consensus 74 RTN~eGa~~La~~fp~y~V~ 93 (137)
+.+++-+++|++.||+....
T Consensus 7 ~~~ee~l~~L~emFP~ld~~ 26 (59)
T 1wgl_A 7 GCSEEDLKAIQDMFPNMDQE 26 (59)
T ss_dssp SSCHHHHHHHHHHCSSSCHH
T ss_pred CCCHHHHHHHHHHCCCCCHH
Confidence 45899999999999976543
No 31
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=21.44 E-value=35 Score=23.39 Aligned_cols=26 Identities=19% Similarity=0.128 Sum_probs=18.8
Q ss_pred ecCccccHHHHH-HHHHhCCCC-CeEEE
Q psy958 70 GISKWTNEKGAR-AVADSFPEY-PCTAI 95 (137)
Q Consensus 70 GlS~RTN~eGa~-~La~~fp~y-~V~~V 95 (137)
..|.-|=+.|++ .|++.+|+. .|.+|
T Consensus 59 ~ss~~Tlk~gIE~~L~~~vpev~~V~~v 86 (92)
T 1veh_A 59 PSSIITLKSGIQNMLQFYIPEVEGVEQV 86 (92)
T ss_dssp HHHHHHTHHHHHHHHHHHCSSCCCEEEC
T ss_pred CCcHHHHHHHHHHHHHHHCCCCCEEEEc
Confidence 366678999998 577789964 55555
No 32
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=20.55 E-value=1.4e+02 Score=25.70 Aligned_cols=63 Identities=16% Similarity=0.249 Sum_probs=41.4
Q ss_pred eCcCCCCc---HHhHHHHHHHHHhccCCCceEEccCCCceeeC-----------Cc----------EEee-ecCccccHH
Q psy958 24 KCDKYLGN---FIYVDTVRAIIKKELRPPQVLDIEDEEAKLDG-----------SD----------VLFT-GISKWTNEK 78 (137)
Q Consensus 24 ~~~~~~SR---~gE~~~i~~~L~k~lg~~~i~~i~~p~gtlEG-----------GD----------VL~t-GlS~RTN~e 78 (137)
+.|++..- .+++..|+++|+ .+|++ +.-+++..+++|| |. --++ .++.+.-..
T Consensus 219 ~VNIlg~~~~~~gD~~eik~lL~-~~Gi~-v~~lpd~s~~ld~~~~~~~~~~~gg~~~~ei~~~~~A~~niv~~~~~~~~ 296 (519)
T 1qgu_B 219 KLNLVTGFETYLGNFRVLKRMME-QMAVP-CSLLSDPSEVLDTPADGHYRMYSGGTTQQEMKEAPDAIDTLLLQPWQLLK 296 (519)
T ss_dssp EEEEECCSCCCHHHHHHHHHHHH-HHTCC-EEESSCTTTTTSCCCSSCCCSCCCCBCHHHHHHGGGEEEEEESSTTTCHH
T ss_pred cEEEECCCCCCcccHHHHHHHHH-HcCCe-EEEecCccccccCcccCcccccCCCCCHHHHHhhhcCCEEEEECHHHHHH
Confidence 34665443 689999999999 99999 8766653222222 11 1111 466666678
Q ss_pred HHHHHHHhCC
Q psy958 79 GARAVADSFP 88 (137)
Q Consensus 79 Ga~~La~~fp 88 (137)
.++.|++.|-
T Consensus 297 ~A~~Le~r~G 306 (519)
T 1qgu_B 297 SKKVVQEMWN 306 (519)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHHHcC
Confidence 8899999883
Done!