Query psy9582
Match_columns 329
No_of_seqs 175 out of 1806
Neff 8.4
Searched_HMMs 46136
Date Fri Aug 16 23:21:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9582.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9582hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05442 malate dehydrogenase; 100.0 2.7E-73 5.8E-78 527.2 36.3 323 2-328 1-326 (326)
2 TIGR01759 MalateDH-SF1 malate 100.0 9.7E-72 2.1E-76 516.2 35.8 316 3-323 1-322 (323)
3 COG0039 Mdh Malate/lactate deh 100.0 1.8E-71 3.9E-76 504.7 35.2 305 6-328 1-311 (313)
4 TIGR01757 Malate-DH_plant mala 100.0 3.7E-70 8E-75 512.7 37.1 317 4-328 43-368 (387)
5 PLN00112 malate dehydrogenase 100.0 5.1E-70 1.1E-74 518.6 36.8 318 4-328 99-424 (444)
6 cd01338 MDH_choloroplast_like 100.0 6E-69 1.3E-73 498.2 36.4 317 4-325 1-321 (322)
7 cd05290 LDH_3 A subgroup of L- 100.0 2E-68 4.2E-73 491.7 34.4 297 7-321 1-306 (307)
8 cd00704 MDH Malate dehydrogena 100.0 1.7E-68 3.7E-73 495.4 34.0 314 6-324 1-322 (323)
9 PRK00066 ldh L-lactate dehydro 100.0 1.4E-66 2.9E-71 482.2 36.0 305 1-324 1-313 (315)
10 PLN02602 lactate dehydrogenase 100.0 4.3E-66 9.3E-71 482.5 35.5 302 6-324 38-348 (350)
11 cd05295 MDH_like Malate dehydr 100.0 2.4E-66 5.2E-71 493.0 33.3 313 2-324 120-450 (452)
12 TIGR01771 L-LDH-NAD L-lactate 100.0 3E-66 6.4E-71 476.3 32.5 293 10-319 1-299 (299)
13 cd05293 LDH_1 A subgroup of L- 100.0 8.2E-66 1.8E-70 475.7 35.5 300 5-322 3-311 (312)
14 cd01336 MDH_cytoplasmic_cytoso 100.0 8E-66 1.7E-70 478.7 34.8 315 4-324 1-324 (325)
15 TIGR01758 MDH_euk_cyt malate d 100.0 2.1E-65 4.5E-70 475.0 33.9 312 7-324 1-322 (324)
16 KOG1495|consensus 100.0 3.1E-65 6.8E-70 442.6 28.6 299 5-323 20-329 (332)
17 cd05291 HicDH_like L-2-hydroxy 100.0 5.8E-64 1.3E-68 464.6 35.3 299 6-322 1-305 (306)
18 PLN00135 malate dehydrogenase 100.0 3E-64 6.5E-69 462.7 32.0 297 25-328 2-308 (309)
19 TIGR01756 LDH_protist lactate 100.0 9.8E-64 2.1E-68 460.5 31.7 299 23-328 3-312 (313)
20 cd00300 LDH_like L-lactate deh 100.0 2.9E-63 6.4E-68 458.1 34.5 295 8-321 1-299 (300)
21 PTZ00117 malate dehydrogenase; 100.0 7.6E-62 1.6E-66 451.8 37.8 305 4-328 4-318 (319)
22 cd05292 LDH_2 A subgroup of L- 100.0 3.2E-61 6.9E-66 446.1 34.6 300 6-323 1-307 (308)
23 TIGR01763 MalateDH_bact malate 100.0 3.6E-61 7.8E-66 444.4 34.5 296 6-323 2-304 (305)
24 PTZ00082 L-lactate dehydrogena 100.0 9.8E-61 2.1E-65 443.8 37.0 302 2-323 3-319 (321)
25 TIGR01772 MDH_euk_gproteo mala 100.0 2.1E-61 4.5E-66 444.9 32.0 294 7-329 1-311 (312)
26 KOG1496|consensus 100.0 2.5E-62 5.5E-67 417.9 23.3 324 2-328 1-330 (332)
27 cd01337 MDH_glyoxysomal_mitoch 100.0 1.3E-60 2.8E-65 438.8 31.9 292 6-327 1-309 (310)
28 cd05294 LDH-like_MDH_nadp A la 100.0 4.8E-60 1E-64 437.9 34.8 302 6-323 1-308 (309)
29 PRK06223 malate dehydrogenase; 100.0 4.8E-58 1E-62 425.9 34.7 297 6-324 3-306 (307)
30 cd01339 LDH-like_MDH L-lactate 100.0 5.2E-58 1.1E-62 424.0 34.4 292 8-321 1-299 (300)
31 PTZ00325 malate dehydrogenase; 100.0 4.5E-58 9.8E-63 423.9 33.8 296 4-329 7-318 (321)
32 PRK05086 malate dehydrogenase; 100.0 7.9E-57 1.7E-61 416.4 33.2 294 6-329 1-311 (312)
33 PLN00106 malate dehydrogenase 100.0 8.9E-57 1.9E-61 415.6 32.2 290 5-322 18-322 (323)
34 cd00650 LDH_MDH_like NAD-depen 100.0 3E-53 6.4E-58 385.3 30.9 257 8-321 1-262 (263)
35 KOG1494|consensus 100.0 1.5E-48 3.3E-53 340.2 23.4 300 4-328 27-339 (345)
36 PF02866 Ldh_1_C: lactate/mala 100.0 2.7E-36 5.8E-41 257.5 17.5 166 159-327 1-173 (174)
37 cd05197 GH4_glycoside_hydrolas 100.0 4E-32 8.8E-37 260.3 29.0 294 6-323 1-390 (425)
38 PF00056 Ldh_1_N: lactate/mala 100.0 2.2E-33 4.8E-38 231.0 15.6 141 6-157 1-141 (141)
39 PRK15076 alpha-galactosidase; 100.0 5E-31 1.1E-35 253.6 28.6 294 6-323 2-384 (431)
40 cd05296 GH4_P_beta_glucosidase 100.0 8.1E-31 1.8E-35 250.9 28.0 293 6-322 1-378 (419)
41 cd05298 GH4_GlvA_pagL_like Gly 100.0 1.1E-29 2.4E-34 243.8 30.0 298 6-323 1-393 (437)
42 cd05297 GH4_alpha_glucosidase_ 100.0 2.5E-28 5.3E-33 235.3 27.9 295 6-323 1-387 (423)
43 COG1486 CelF Alpha-galactosida 100.0 6.7E-28 1.4E-32 226.7 24.1 297 4-323 2-396 (442)
44 PF02056 Glyco_hydro_4: Family 99.8 5.1E-20 1.1E-24 156.2 13.2 156 7-176 1-183 (183)
45 PF02737 3HCDH_N: 3-hydroxyacy 99.1 3.4E-10 7.3E-15 97.0 8.3 106 7-141 1-120 (180)
46 PRK07066 3-hydroxybutyryl-CoA 99.0 4.5E-09 9.8E-14 97.7 12.7 112 6-145 8-129 (321)
47 PRK07819 3-hydroxybutyryl-CoA 98.9 6.2E-09 1.3E-13 95.8 11.1 111 1-140 1-126 (286)
48 COG1250 FadB 3-hydroxyacyl-CoA 98.9 1.8E-08 4E-13 92.4 11.8 144 6-178 4-178 (307)
49 PF01210 NAD_Gly3P_dh_N: NAD-d 98.9 4.9E-09 1.1E-13 87.8 7.3 111 7-147 1-122 (157)
50 PF03721 UDPG_MGDP_dh_N: UDP-g 98.9 8.6E-09 1.9E-13 88.7 8.3 124 6-147 1-139 (185)
51 COG0240 GpsA Glycerol-3-phosph 98.9 3.4E-08 7.4E-13 90.8 12.3 113 6-148 2-125 (329)
52 COG1004 Ugd Predicted UDP-gluc 98.8 3.6E-08 7.9E-13 92.1 12.0 121 6-144 1-132 (414)
53 KOG2304|consensus 98.8 2.9E-09 6.2E-14 91.8 3.6 117 3-143 9-141 (298)
54 PRK08293 3-hydroxybutyryl-CoA 98.8 4.6E-08 9.9E-13 90.1 10.7 106 5-138 3-123 (287)
55 PRK07530 3-hydroxybutyryl-CoA 98.7 6.3E-08 1.4E-12 89.4 10.1 107 1-137 1-121 (292)
56 PRK11730 fadB multifunctional 98.7 1.3E-07 2.8E-12 97.4 12.7 145 6-181 314-491 (715)
57 PRK05808 3-hydroxybutyryl-CoA 98.7 9.5E-08 2.1E-12 87.7 10.0 112 6-146 4-129 (282)
58 PRK11154 fadJ multifunctional 98.7 1.7E-07 3.6E-12 96.5 12.8 147 6-181 310-488 (708)
59 TIGR02437 FadB fatty oxidation 98.7 7.5E-08 1.6E-12 98.9 10.2 147 6-181 314-491 (714)
60 PRK06130 3-hydroxybutyryl-CoA 98.7 1.6E-07 3.6E-12 87.4 11.4 108 2-137 1-117 (311)
61 TIGR02440 FadJ fatty oxidation 98.7 2.2E-07 4.7E-12 95.5 12.6 147 6-181 305-483 (699)
62 TIGR02441 fa_ox_alpha_mit fatt 98.7 1.6E-07 3.5E-12 96.8 11.6 144 6-178 336-510 (737)
63 PRK06035 3-hydroxyacyl-CoA deh 98.6 2.7E-07 5.9E-12 85.1 10.4 105 6-139 4-125 (291)
64 PLN02545 3-hydroxybutyryl-CoA 98.6 3E-07 6.5E-12 85.0 10.5 108 2-138 1-122 (295)
65 PRK09260 3-hydroxybutyryl-CoA 98.6 2.7E-07 5.8E-12 85.0 9.8 98 6-129 2-113 (288)
66 PRK08268 3-hydroxy-acyl-CoA de 98.6 2.8E-07 6.2E-12 91.2 10.5 105 4-137 6-124 (507)
67 PRK07531 bifunctional 3-hydrox 98.6 4.5E-07 9.7E-12 89.7 11.2 109 3-139 2-120 (495)
68 TIGR01915 npdG NADPH-dependent 98.5 6.8E-07 1.5E-11 79.0 10.6 104 6-138 1-106 (219)
69 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.5 4E-07 8.8E-12 89.9 9.9 105 5-138 5-123 (503)
70 PF02719 Polysacc_synt_2: Poly 98.5 3.4E-07 7.3E-12 83.5 7.2 122 8-140 1-139 (293)
71 TIGR03376 glycerol3P_DH glycer 98.4 1.7E-06 3.6E-11 81.4 10.6 122 7-147 1-137 (342)
72 PF03807 F420_oxidored: NADP o 98.4 7.7E-07 1.7E-11 67.9 6.9 94 7-135 1-96 (96)
73 PTZ00345 glycerol-3-phosphate 98.4 2.4E-06 5.2E-11 81.0 11.1 119 4-147 10-150 (365)
74 KOG1502|consensus 98.4 4.3E-06 9.4E-11 77.1 11.7 123 1-134 1-128 (327)
75 PLN02353 probable UDP-glucose 98.4 3.2E-06 6.9E-11 82.9 11.2 123 6-139 2-134 (473)
76 PRK12439 NAD(P)H-dependent gly 98.3 5.5E-06 1.2E-10 78.2 11.8 116 3-147 5-130 (341)
77 PF01073 3Beta_HSD: 3-beta hyd 98.3 3E-06 6.5E-11 77.8 9.3 106 9-126 1-109 (280)
78 PRK06129 3-hydroxyacyl-CoA deh 98.3 4E-06 8.7E-11 78.0 10.2 104 6-137 3-120 (308)
79 TIGR03026 NDP-sugDHase nucleot 98.3 5.7E-06 1.2E-10 80.1 11.3 110 6-133 1-120 (411)
80 PLN02166 dTDP-glucose 4,6-dehy 98.3 9.8E-06 2.1E-10 79.0 12.9 113 3-134 118-234 (436)
81 COG1086 Predicted nucleoside-d 98.3 4.9E-06 1.1E-10 81.2 10.0 126 4-140 249-387 (588)
82 PRK00094 gpsA NAD(P)H-dependen 98.3 6.9E-06 1.5E-10 76.7 10.7 114 6-147 2-124 (325)
83 PRK14618 NAD(P)H-dependent gly 98.3 5.5E-06 1.2E-10 77.7 10.0 103 2-136 1-107 (328)
84 PRK14620 NAD(P)H-dependent gly 98.3 6.7E-06 1.5E-10 77.1 10.5 114 6-147 1-125 (326)
85 COG2085 Predicted dinucleotide 98.2 3.7E-05 8E-10 66.5 14.0 95 6-136 2-96 (211)
86 PRK15057 UDP-glucose 6-dehydro 98.2 2.6E-05 5.7E-10 74.8 14.5 119 6-143 1-128 (388)
87 PF03446 NAD_binding_2: NAD bi 98.2 6.3E-06 1.4E-10 69.4 8.2 92 6-134 2-95 (163)
88 KOG2711|consensus 98.2 2.5E-05 5.4E-10 71.7 11.7 140 3-163 19-176 (372)
89 PRK06522 2-dehydropantoate 2-r 98.2 1.7E-05 3.7E-10 73.2 11.1 107 6-141 1-108 (304)
90 PLN02695 GDP-D-mannose-3',5'-e 98.1 1E-05 2.2E-10 77.2 9.3 175 1-191 17-202 (370)
91 PLN02206 UDP-glucuronate decar 98.1 3.6E-05 7.8E-10 75.2 12.7 112 4-134 118-233 (442)
92 PRK11064 wecC UDP-N-acetyl-D-m 98.1 4.6E-05 1E-09 73.8 13.3 114 2-138 1-125 (415)
93 PLN02650 dihydroflavonol-4-red 98.1 2.5E-05 5.4E-10 73.8 11.2 118 3-133 3-127 (351)
94 TIGR03589 PseB UDP-N-acetylglu 98.1 2E-05 4.3E-10 73.8 10.1 121 1-133 1-124 (324)
95 PRK08229 2-dehydropantoate 2-r 98.1 1.3E-05 2.8E-10 75.5 8.4 104 6-139 3-113 (341)
96 PLN03209 translocon at the inn 98.1 2.4E-05 5.2E-10 77.7 10.2 118 3-133 78-207 (576)
97 PRK14619 NAD(P)H-dependent gly 98.1 2.6E-05 5.5E-10 72.6 9.9 80 4-134 3-83 (308)
98 PRK12921 2-dehydropantoate 2-r 98.1 2E-05 4.4E-10 72.9 9.3 106 6-140 1-109 (305)
99 PLN02427 UDP-apiose/xylose syn 98.0 1.7E-05 3.7E-10 76.0 8.9 116 4-134 13-136 (386)
100 PRK15181 Vi polysaccharide bio 98.0 2.8E-05 6E-10 73.5 9.9 176 5-190 15-199 (348)
101 PLN02662 cinnamyl-alcohol dehy 98.0 4.5E-05 9.8E-10 70.8 11.2 107 4-122 3-116 (322)
102 PRK07634 pyrroline-5-carboxyla 98.0 4.4E-05 9.6E-10 68.4 10.6 102 1-136 1-102 (245)
103 PRK07680 late competence prote 98.0 3.9E-05 8.4E-10 70.1 10.2 100 6-137 1-100 (273)
104 PRK12491 pyrroline-5-carboxyla 98.0 6.4E-05 1.4E-09 68.7 10.5 95 6-133 3-97 (272)
105 PRK08655 prephenate dehydrogen 97.9 9.4E-05 2E-09 72.1 11.8 93 6-134 1-93 (437)
106 PRK06249 2-dehydropantoate 2-r 97.9 6.6E-05 1.4E-09 70.0 10.4 111 1-139 1-112 (313)
107 PRK15182 Vi polysaccharide bio 97.9 7.9E-05 1.7E-09 72.4 10.8 110 4-137 5-125 (425)
108 CHL00194 ycf39 Ycf39; Provisio 97.9 5.2E-05 1.1E-09 70.7 9.2 108 6-133 1-109 (317)
109 PLN02214 cinnamoyl-CoA reducta 97.9 0.00013 2.8E-09 68.9 11.8 113 5-133 10-126 (342)
110 PLN00198 anthocyanidin reducta 97.9 0.00013 2.8E-09 68.5 11.8 117 5-133 9-130 (338)
111 PLN02989 cinnamyl-alcohol dehy 97.9 0.00015 3.2E-09 67.6 11.9 118 3-133 3-128 (325)
112 PRK07417 arogenate dehydrogena 97.9 6.4E-05 1.4E-09 68.9 9.0 90 6-132 1-90 (279)
113 PLN02778 3,5-epimerase/4-reduc 97.9 0.00026 5.5E-09 65.5 12.8 89 5-123 9-102 (298)
114 PLN02240 UDP-glucose 4-epimera 97.9 0.00012 2.6E-09 68.9 10.8 124 1-134 1-132 (352)
115 PLN02986 cinnamyl-alcohol dehy 97.9 0.00018 3.9E-09 67.0 11.8 110 1-122 1-117 (322)
116 PRK11880 pyrroline-5-carboxyla 97.9 7.5E-05 1.6E-09 67.9 9.0 95 6-136 3-97 (267)
117 PRK07679 pyrroline-5-carboxyla 97.8 0.00014 3.1E-09 66.6 10.8 99 6-136 4-102 (279)
118 PF10727 Rossmann-like: Rossma 97.8 0.0001 2.3E-09 59.2 8.6 103 5-143 10-116 (127)
119 TIGR03466 HpnA hopanoid-associ 97.8 9.8E-05 2.1E-09 68.5 9.7 112 6-134 1-113 (328)
120 PF11975 Glyco_hydro_4C: Famil 97.8 0.00013 2.8E-09 65.1 9.9 71 253-324 141-214 (232)
121 PLN02688 pyrroline-5-carboxyla 97.8 0.00017 3.7E-09 65.5 10.6 97 6-136 1-98 (266)
122 PF13460 NAD_binding_10: NADH( 97.8 6.6E-05 1.4E-09 63.8 7.3 97 8-133 1-97 (183)
123 COG0451 WcaG Nucleoside-diphos 97.8 0.00017 3.7E-09 66.4 10.5 167 7-191 2-177 (314)
124 PRK13394 3-hydroxybutyrate deh 97.8 8.7E-05 1.9E-09 66.6 8.3 121 1-133 1-143 (262)
125 COG0300 DltE Short-chain dehyd 97.8 0.0003 6.4E-09 63.6 11.3 118 3-133 4-142 (265)
126 TIGR02622 CDP_4_6_dhtase CDP-g 97.8 0.00017 3.7E-09 68.0 10.1 118 5-134 4-127 (349)
127 PRK05708 2-dehydropantoate 2-r 97.8 0.0003 6.6E-09 65.3 11.5 122 5-158 2-125 (305)
128 TIGR00872 gnd_rel 6-phosphoglu 97.8 0.00012 2.6E-09 67.8 8.7 95 6-135 1-95 (298)
129 PRK11908 NAD-dependent epimera 97.8 0.0001 2.2E-09 69.4 8.5 111 6-134 2-118 (347)
130 PLN02583 cinnamoyl-CoA reducta 97.8 0.00027 5.9E-09 65.2 11.1 120 4-133 5-127 (297)
131 TIGR01777 yfcH conserved hypot 97.7 0.00013 2.8E-09 66.5 8.8 97 8-123 1-101 (292)
132 PLN02572 UDP-sulfoquinovose sy 97.7 0.00011 2.3E-09 71.9 8.5 178 5-190 47-262 (442)
133 PRK11559 garR tartronate semia 97.7 0.00022 4.8E-09 65.8 9.7 64 6-91 3-66 (296)
134 PRK12939 short chain dehydroge 97.7 0.00043 9.3E-09 61.6 11.2 123 1-134 1-143 (250)
135 PRK08125 bifunctional UDP-gluc 97.7 0.00013 2.8E-09 74.9 8.8 169 4-190 314-497 (660)
136 PRK06180 short chain dehydroge 97.7 0.00027 5.8E-09 64.4 9.9 119 4-133 3-136 (277)
137 KOG1430|consensus 97.7 0.00025 5.3E-09 66.8 9.3 123 2-134 1-126 (361)
138 PRK07231 fabG 3-ketoacyl-(acyl 97.7 0.00019 4.1E-09 64.0 8.3 36 3-45 3-38 (251)
139 PRK10675 UDP-galactose-4-epime 97.7 0.00072 1.6E-08 63.2 12.5 116 6-134 1-124 (338)
140 PLN02896 cinnamyl-alcohol dehy 97.6 0.00028 6E-09 66.7 9.7 117 5-133 10-137 (353)
141 PRK07502 cyclohexadienyl dehyd 97.6 0.00079 1.7E-08 62.6 12.4 95 6-134 7-101 (307)
142 PRK06928 pyrroline-5-carboxyla 97.6 0.00043 9.4E-09 63.4 10.5 101 6-137 2-102 (277)
143 PRK07326 short chain dehydroge 97.6 0.00029 6.3E-09 62.2 9.2 123 1-135 1-141 (237)
144 PRK06194 hypothetical protein; 97.6 0.00063 1.4E-08 62.1 11.6 160 5-184 6-189 (287)
145 PTZ00142 6-phosphogluconate de 97.6 0.00024 5.1E-09 69.8 9.0 97 7-134 3-102 (470)
146 PRK12937 short chain dehydroge 97.6 0.00025 5.3E-09 63.0 8.3 124 1-134 1-140 (245)
147 COG2084 MmsB 3-hydroxyisobutyr 97.6 0.00036 7.7E-09 63.8 9.3 93 6-134 1-96 (286)
148 TIGR01505 tartro_sem_red 2-hyd 97.6 0.00026 5.5E-09 65.3 8.6 63 7-91 1-63 (291)
149 PRK08269 3-hydroxybutyryl-CoA 97.6 0.00038 8.3E-09 64.9 9.7 107 17-146 1-126 (314)
150 TIGR01472 gmd GDP-mannose 4,6- 97.6 0.00031 6.7E-09 66.1 9.2 121 6-133 1-131 (343)
151 PRK05653 fabG 3-ketoacyl-(acyl 97.6 0.00021 4.6E-09 63.2 7.7 38 1-45 1-38 (246)
152 COG2910 Putative NADH-flavin r 97.6 0.00051 1.1E-08 58.1 9.2 105 6-134 1-105 (211)
153 COG1087 GalE UDP-glucose 4-epi 97.6 0.00039 8.4E-09 63.2 9.1 153 6-177 1-163 (329)
154 PRK07067 sorbitol dehydrogenas 97.6 0.00031 6.8E-09 63.0 8.7 123 1-134 1-140 (257)
155 KOG1429|consensus 97.6 0.00013 2.8E-09 65.6 5.9 112 5-133 27-140 (350)
156 COG4221 Short-chain alcohol de 97.6 0.00052 1.1E-08 60.7 9.5 116 6-134 7-140 (246)
157 PRK05717 oxidoreductase; Valid 97.6 0.00021 4.6E-09 64.1 7.3 118 6-134 11-144 (255)
158 PF01488 Shikimate_DH: Shikima 97.6 0.00024 5.3E-09 57.8 6.9 76 4-94 11-86 (135)
159 PRK12429 3-hydroxybutyrate deh 97.6 0.00034 7.4E-09 62.5 8.5 120 1-134 1-140 (258)
160 COG1893 ApbA Ketopantoate redu 97.6 0.00052 1.1E-08 63.8 9.9 124 6-160 1-125 (307)
161 PRK09987 dTDP-4-dehydrorhamnos 97.6 0.00045 9.8E-09 63.8 9.5 99 6-133 1-103 (299)
162 PRK08265 short chain dehydroge 97.5 0.00046 1E-08 62.3 9.2 118 5-133 6-136 (261)
163 PRK12480 D-lactate dehydrogena 97.5 0.0005 1.1E-08 64.6 9.5 91 5-135 146-236 (330)
164 PRK07806 short chain dehydroge 97.5 0.00027 5.9E-09 62.9 7.4 119 5-133 6-134 (248)
165 PF01118 Semialdhyde_dh: Semia 97.5 0.00028 6E-09 56.3 6.6 74 7-91 1-74 (121)
166 PRK07478 short chain dehydroge 97.5 0.00067 1.4E-08 60.8 9.8 121 1-134 1-143 (254)
167 PLN02653 GDP-mannose 4,6-dehyd 97.5 0.0004 8.7E-09 65.2 8.6 112 5-123 6-125 (340)
168 TIGR01181 dTDP_gluc_dehyt dTDP 97.5 0.0004 8.7E-09 63.9 8.4 173 7-190 1-184 (317)
169 PRK12490 6-phosphogluconate de 97.5 0.00062 1.4E-08 63.0 9.7 92 6-134 1-95 (299)
170 PRK10538 malonic semialdehyde 97.5 0.00037 8E-09 62.3 7.9 33 6-45 1-33 (248)
171 COG1748 LYS9 Saccharopine dehy 97.5 0.0015 3.2E-08 62.2 12.1 76 6-92 2-77 (389)
172 PTZ00431 pyrroline carboxylate 97.5 0.00079 1.7E-08 61.1 10.0 91 6-137 4-94 (260)
173 PRK06545 prephenate dehydrogen 97.5 0.0013 2.8E-08 62.6 11.7 94 6-133 1-95 (359)
174 PRK09135 pteridine reductase; 97.5 0.00069 1.5E-08 60.1 9.3 112 1-122 1-130 (249)
175 PRK06172 short chain dehydroge 97.5 0.00062 1.3E-08 60.9 8.9 35 4-45 6-40 (253)
176 PRK07774 short chain dehydroge 97.5 0.0014 3.1E-08 58.3 11.2 35 4-45 5-39 (250)
177 PRK15461 NADH-dependent gamma- 97.5 0.00056 1.2E-08 63.3 8.7 62 7-90 3-64 (296)
178 KOG2666|consensus 97.5 0.00021 4.6E-09 65.0 5.6 80 6-96 2-91 (481)
179 PRK07666 fabG 3-ketoacyl-(acyl 97.4 0.0006 1.3E-08 60.5 8.5 38 1-45 1-40 (239)
180 PRK05993 short chain dehydroge 97.4 0.00064 1.4E-08 62.0 8.9 116 2-134 1-135 (277)
181 PRK12828 short chain dehydroge 97.4 0.00056 1.2E-08 60.3 8.0 34 5-45 7-40 (239)
182 PRK12549 shikimate 5-dehydroge 97.4 0.00064 1.4E-08 62.5 8.5 73 5-90 127-199 (284)
183 PRK09599 6-phosphogluconate de 97.4 0.00068 1.5E-08 62.8 8.8 92 6-134 1-95 (301)
184 PRK07424 bifunctional sterol d 97.4 0.001 2.2E-08 64.2 10.1 101 4-118 177-283 (406)
185 PRK12936 3-ketoacyl-(acyl-carr 97.4 0.00078 1.7E-08 59.7 8.8 125 1-136 1-141 (245)
186 PRK11199 tyrA bifunctional cho 97.4 0.00061 1.3E-08 65.1 8.6 79 4-133 97-175 (374)
187 PRK10084 dTDP-glucose 4,6 dehy 97.4 0.00078 1.7E-08 63.5 9.0 174 6-190 1-201 (352)
188 COG0345 ProC Pyrroline-5-carbo 97.4 0.0009 2E-08 60.6 8.8 94 6-133 2-95 (266)
189 COG0677 WecC UDP-N-acetyl-D-ma 97.4 0.0014 3.1E-08 61.6 10.3 114 5-137 9-133 (436)
190 PRK06139 short chain dehydroge 97.4 0.00067 1.4E-08 63.8 8.4 120 1-133 1-142 (330)
191 PRK07576 short chain dehydroge 97.4 0.0011 2.5E-08 59.8 9.6 121 5-136 9-146 (264)
192 PRK05866 short chain dehydroge 97.4 0.00089 1.9E-08 61.7 9.0 43 4-57 39-81 (293)
193 PF02558 ApbA: Ketopantoate re 97.4 0.00045 9.8E-09 57.0 6.4 106 8-142 1-110 (151)
194 PRK06179 short chain dehydroge 97.4 0.00079 1.7E-08 60.9 8.5 37 1-45 1-37 (270)
195 PRK08267 short chain dehydroge 97.4 0.00097 2.1E-08 59.9 9.0 118 6-135 2-137 (260)
196 PRK08263 short chain dehydroge 97.4 0.00054 1.2E-08 62.3 7.4 36 1-45 1-36 (275)
197 PLN02686 cinnamoyl-CoA reducta 97.4 0.00071 1.5E-08 64.5 8.4 106 5-122 53-169 (367)
198 PLN02657 3,8-divinyl protochlo 97.4 0.00093 2E-08 64.3 9.2 116 2-133 57-181 (390)
199 PRK10217 dTDP-glucose 4,6-dehy 97.4 0.0015 3.3E-08 61.5 10.6 175 6-190 2-194 (355)
200 PRK06500 short chain dehydroge 97.4 0.00098 2.1E-08 59.3 8.7 105 5-122 6-125 (249)
201 PLN02256 arogenate dehydrogena 97.3 0.0037 8E-08 58.0 12.7 92 4-134 35-128 (304)
202 PRK07453 protochlorophyllide o 97.3 0.00077 1.7E-08 62.9 8.1 38 1-45 1-39 (322)
203 PRK05479 ketol-acid reductoiso 97.3 0.0012 2.6E-08 61.7 9.2 64 5-90 17-80 (330)
204 PRK06200 2,3-dihydroxy-2,3-dih 97.3 0.00064 1.4E-08 61.3 7.3 35 4-45 5-39 (263)
205 PRK06124 gluconate 5-dehydroge 97.3 0.00084 1.8E-08 60.1 8.1 118 5-135 11-148 (256)
206 PRK08213 gluconate 5-dehydroge 97.3 0.0028 6.1E-08 56.9 11.5 119 5-134 12-149 (259)
207 TIGR01724 hmd_rel H2-forming N 97.3 0.0033 7.1E-08 58.0 11.7 107 6-145 1-129 (341)
208 PRK07063 short chain dehydroge 97.3 0.001 2.2E-08 59.8 8.5 121 1-134 1-145 (260)
209 PRK05557 fabG 3-ketoacyl-(acyl 97.3 0.0013 2.8E-08 58.2 9.0 124 1-134 1-142 (248)
210 PRK05865 hypothetical protein; 97.3 0.0016 3.4E-08 68.2 10.8 105 6-136 1-105 (854)
211 PRK07523 gluconate 5-dehydroge 97.3 0.00098 2.1E-08 59.7 8.3 120 5-135 10-147 (255)
212 PRK08085 gluconate 5-dehydroge 97.3 0.002 4.3E-08 57.7 10.3 120 4-134 8-145 (254)
213 PRK14982 acyl-ACP reductase; P 97.3 0.0012 2.5E-08 62.1 8.9 72 5-95 155-227 (340)
214 TIGR01214 rmlD dTDP-4-dehydror 97.3 0.0011 2.4E-08 60.4 8.6 95 7-133 1-99 (287)
215 TIGR03325 BphB_TodD cis-2,3-di 97.3 0.00055 1.2E-08 61.7 6.5 35 4-45 4-38 (262)
216 PRK12746 short chain dehydroge 97.3 0.002 4.2E-08 57.6 10.0 119 5-134 6-147 (254)
217 cd05213 NAD_bind_Glutamyl_tRNA 97.3 0.0015 3.1E-08 61.0 9.3 103 4-139 177-279 (311)
218 PRK07890 short chain dehydroge 97.3 0.0031 6.7E-08 56.4 11.1 120 4-134 4-141 (258)
219 PRK06196 oxidoreductase; Provi 97.3 0.0017 3.7E-08 60.4 9.7 116 5-134 26-156 (315)
220 PRK12826 3-ketoacyl-(acyl-carr 97.3 0.00098 2.1E-08 59.2 7.8 34 5-45 6-39 (251)
221 PRK05884 short chain dehydroge 97.3 0.0012 2.7E-08 58.1 8.3 33 6-45 1-33 (223)
222 PRK08643 acetoin reductase; Va 97.3 0.0026 5.6E-08 57.0 10.5 117 6-134 3-139 (256)
223 PRK08507 prephenate dehydrogen 97.3 0.0033 7.1E-08 57.5 11.2 66 6-91 1-66 (275)
224 PRK07814 short chain dehydroge 97.3 0.0025 5.5E-08 57.4 10.4 118 5-134 10-147 (263)
225 PRK09072 short chain dehydroge 97.2 0.0035 7.7E-08 56.4 11.2 122 1-134 1-139 (263)
226 KOG2305|consensus 97.2 0.00028 6E-09 61.5 3.7 111 5-139 3-124 (313)
227 PRK11150 rfaD ADP-L-glycero-D- 97.2 0.0022 4.9E-08 59.2 10.1 108 8-133 2-115 (308)
228 PLN02260 probable rhamnose bio 97.2 0.0016 3.6E-08 67.0 10.1 122 4-134 5-132 (668)
229 PRK08219 short chain dehydroge 97.2 0.0017 3.8E-08 56.7 8.9 32 6-45 4-35 (227)
230 PRK06128 oxidoreductase; Provi 97.2 0.0015 3.2E-08 60.3 8.8 120 6-134 56-192 (300)
231 PRK07102 short chain dehydroge 97.2 0.0026 5.6E-08 56.5 9.9 117 6-133 2-134 (243)
232 PRK07201 short chain dehydroge 97.2 0.0014 3E-08 67.2 9.0 107 6-122 1-115 (657)
233 PRK08278 short chain dehydroge 97.2 0.0031 6.8E-08 57.3 10.4 38 1-45 1-39 (273)
234 PRK07825 short chain dehydroge 97.2 0.0014 2.9E-08 59.5 8.0 117 4-134 4-137 (273)
235 PRK08945 putative oxoacyl-(acy 97.2 0.005 1.1E-07 54.8 11.5 118 4-134 11-152 (247)
236 PF01113 DapB_N: Dihydrodipico 97.2 0.0031 6.6E-08 50.5 9.1 73 6-90 1-74 (124)
237 PRK08339 short chain dehydroge 97.2 0.01 2.2E-07 53.6 13.7 118 5-135 8-145 (263)
238 PRK05875 short chain dehydroge 97.2 0.0014 3.1E-08 59.4 8.1 34 5-45 7-40 (276)
239 PRK08642 fabG 3-ketoacyl-(acyl 97.2 0.0014 3E-08 58.5 7.8 38 1-45 1-38 (253)
240 PLN02253 xanthoxin dehydrogena 97.2 0.0018 3.8E-08 58.9 8.6 34 5-45 18-51 (280)
241 PRK05876 short chain dehydroge 97.2 0.0028 6.2E-08 57.7 9.8 118 5-134 6-143 (275)
242 PRK09134 short chain dehydroge 97.2 0.001 2.3E-08 59.7 6.8 122 2-133 6-145 (258)
243 PRK07454 short chain dehydroge 97.2 0.002 4.2E-08 57.2 8.5 35 4-45 5-39 (241)
244 PRK07024 short chain dehydroge 97.2 0.001 2.2E-08 59.8 6.7 33 6-45 3-35 (257)
245 PRK09186 flagellin modificatio 97.2 0.0014 3.1E-08 58.5 7.7 37 1-45 1-37 (256)
246 TIGR03206 benzo_BadH 2-hydroxy 97.2 0.0027 5.8E-08 56.5 9.3 117 5-134 3-139 (250)
247 PRK06398 aldose dehydrogenase; 97.2 0.0012 2.6E-08 59.5 7.0 116 5-134 6-131 (258)
248 PRK12829 short chain dehydroge 97.1 0.0016 3.5E-08 58.4 7.8 35 4-45 10-44 (264)
249 PRK12747 short chain dehydroge 97.1 0.0079 1.7E-07 53.7 12.3 124 1-135 1-146 (252)
250 PRK08277 D-mannonate oxidoredu 97.1 0.0042 9.1E-08 56.4 10.6 33 6-45 11-43 (278)
251 PRK06182 short chain dehydroge 97.1 0.0019 4.1E-08 58.5 8.2 113 5-134 3-133 (273)
252 COG1090 Predicted nucleoside-d 97.1 0.0039 8.4E-08 56.2 9.8 105 8-133 1-110 (297)
253 PRK07109 short chain dehydroge 97.1 0.0055 1.2E-07 57.6 11.5 116 6-134 9-144 (334)
254 TIGR02354 thiF_fam2 thiamine b 97.1 0.0029 6.4E-08 55.0 9.0 34 5-45 21-54 (200)
255 PRK12384 sorbitol-6-phosphate 97.1 0.0078 1.7E-07 53.9 12.1 118 6-135 3-142 (259)
256 cd05312 NAD_bind_1_malic_enz N 97.1 0.00061 1.3E-08 61.9 4.7 120 6-147 26-157 (279)
257 PRK06482 short chain dehydroge 97.1 0.0023 5E-08 58.1 8.6 115 6-133 3-134 (276)
258 PRK06101 short chain dehydroge 97.1 0.0016 3.5E-08 57.9 7.5 117 6-134 2-128 (240)
259 PF01370 Epimerase: NAD depend 97.1 0.00065 1.4E-08 59.8 4.8 165 8-190 1-174 (236)
260 PRK12320 hypothetical protein; 97.1 0.0018 3.9E-08 66.3 8.5 101 6-133 1-101 (699)
261 PLN02780 ketoreductase/ oxidor 97.1 0.0033 7.2E-08 58.8 9.8 46 5-61 53-98 (320)
262 COG0569 TrkA K+ transport syst 97.1 0.00055 1.2E-08 60.7 4.2 73 6-91 1-74 (225)
263 PRK07856 short chain dehydroge 97.1 0.0022 4.7E-08 57.4 8.1 38 1-45 1-39 (252)
264 PRK12827 short chain dehydroge 97.1 0.0068 1.5E-07 53.7 11.3 109 5-120 6-130 (249)
265 PRK05650 short chain dehydroge 97.1 0.0028 6E-08 57.4 8.9 116 6-134 1-136 (270)
266 TIGR01179 galE UDP-glucose-4-e 97.1 0.0022 4.7E-08 59.2 8.4 114 7-133 1-120 (328)
267 PRK09291 short chain dehydroge 97.1 0.0043 9.4E-08 55.4 10.0 79 6-95 3-85 (257)
268 PRK06914 short chain dehydroge 97.1 0.0066 1.4E-07 55.1 11.3 33 6-45 4-36 (280)
269 PRK08628 short chain dehydroge 97.1 0.005 1.1E-07 55.2 10.4 106 4-121 6-126 (258)
270 KOG1205|consensus 97.1 0.0035 7.5E-08 57.2 9.2 120 4-137 11-153 (282)
271 PLN02350 phosphogluconate dehy 97.1 0.0017 3.6E-08 64.1 7.7 100 5-134 6-108 (493)
272 cd01065 NAD_bind_Shikimate_DH 97.1 0.0024 5.3E-08 52.7 7.7 74 5-94 19-92 (155)
273 TIGR00873 gnd 6-phosphoglucona 97.1 0.0027 5.8E-08 62.4 9.1 101 7-139 1-106 (467)
274 KOG1201|consensus 97.1 0.0065 1.4E-07 55.4 10.7 116 5-133 38-172 (300)
275 PRK05867 short chain dehydroge 97.1 0.0023 5E-08 57.3 8.0 118 4-133 8-145 (253)
276 PRK06077 fabG 3-ketoacyl-(acyl 97.0 0.0027 5.8E-08 56.6 8.2 124 1-134 1-141 (252)
277 COG0287 TyrA Prephenate dehydr 97.0 0.012 2.6E-07 53.9 12.3 67 5-90 3-71 (279)
278 PRK06476 pyrroline-5-carboxyla 97.0 0.0031 6.7E-08 57.1 8.5 69 6-91 1-69 (258)
279 PRK06197 short chain dehydroge 97.0 0.013 2.8E-07 54.1 12.8 118 5-135 16-153 (306)
280 PRK07069 short chain dehydroge 97.0 0.0031 6.6E-08 56.1 8.4 116 7-134 1-138 (251)
281 PRK07832 short chain dehydroge 97.0 0.01 2.2E-07 53.8 11.9 119 6-135 1-139 (272)
282 PRK07062 short chain dehydroge 97.0 0.011 2.3E-07 53.3 12.0 121 1-134 1-146 (265)
283 PLN02712 arogenate dehydrogena 97.0 0.0074 1.6E-07 62.0 12.0 92 4-134 51-144 (667)
284 TIGR02197 heptose_epim ADP-L-g 97.0 0.0044 9.6E-08 57.1 9.6 110 8-134 1-114 (314)
285 PRK12367 short chain dehydroge 97.0 0.0084 1.8E-07 53.8 11.1 100 6-118 15-117 (245)
286 PLN00141 Tic62-NAD(P)-related 97.0 0.002 4.3E-08 57.8 7.0 103 5-122 17-122 (251)
287 PRK15059 tartronate semialdehy 97.0 0.0026 5.6E-08 58.7 7.9 62 6-90 1-62 (292)
288 PRK07035 short chain dehydroge 97.0 0.0068 1.5E-07 54.1 10.4 34 5-45 8-41 (252)
289 PF03949 Malic_M: Malic enzyme 97.0 0.00048 1E-08 61.7 2.8 121 6-147 26-158 (255)
290 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.002 4.3E-08 55.6 6.6 74 5-92 28-106 (194)
291 PRK06138 short chain dehydroge 97.0 0.0033 7.2E-08 55.9 8.3 35 4-45 4-38 (252)
292 PRK05786 fabG 3-ketoacyl-(acyl 97.0 0.0028 6.1E-08 55.9 7.7 34 5-45 5-38 (238)
293 PRK06463 fabG 3-ketoacyl-(acyl 97.0 0.0044 9.5E-08 55.5 9.0 116 3-134 5-138 (255)
294 TIGR02371 ala_DH_arch alanine 97.0 0.0026 5.7E-08 59.6 7.8 74 4-91 127-200 (325)
295 PRK12744 short chain dehydroge 97.0 0.0075 1.6E-07 54.1 10.5 161 5-184 8-185 (257)
296 PRK06057 short chain dehydroge 97.0 0.0037 8E-08 56.0 8.5 34 5-45 7-40 (255)
297 PRK12742 oxidoreductase; Provi 97.0 0.0051 1.1E-07 54.2 9.2 34 5-45 6-39 (237)
298 PRK08340 glucose-1-dehydrogena 97.0 0.0045 9.7E-08 55.6 9.0 78 6-94 1-87 (259)
299 PRK12823 benD 1,6-dihydroxycyc 97.0 0.0036 7.9E-08 56.1 8.3 34 5-45 8-41 (260)
300 PRK06181 short chain dehydroge 97.0 0.0046 1E-07 55.5 9.0 118 6-134 2-137 (263)
301 PRK06701 short chain dehydroge 96.9 0.0033 7.2E-08 57.8 8.1 119 6-134 47-182 (290)
302 PRK08264 short chain dehydroge 96.9 0.0036 7.8E-08 55.3 8.1 122 1-136 1-135 (238)
303 TIGR01692 HIBADH 3-hydroxyisob 96.9 0.0029 6.4E-08 58.2 7.7 60 10-91 1-60 (288)
304 TIGR01963 PHB_DH 3-hydroxybuty 96.9 0.0057 1.2E-07 54.4 9.4 33 6-45 2-34 (255)
305 PRK07060 short chain dehydroge 96.9 0.0023 5.1E-08 56.7 6.7 117 5-134 9-137 (245)
306 PRK06125 short chain dehydroge 96.9 0.02 4.3E-07 51.4 12.9 118 4-134 6-140 (259)
307 PRK08291 ectoine utilization p 96.9 0.0037 8.1E-08 58.7 8.3 73 5-91 132-205 (330)
308 PRK05565 fabG 3-ketoacyl-(acyl 96.9 0.007 1.5E-07 53.5 9.7 33 6-45 6-39 (247)
309 PRK07889 enoyl-(acyl carrier p 96.9 0.0043 9.3E-08 55.9 8.4 38 1-45 1-42 (256)
310 PRK09242 tropinone reductase; 96.9 0.015 3.3E-07 52.0 11.9 117 5-134 9-147 (257)
311 TIGR02415 23BDH acetoin reduct 96.9 0.0076 1.6E-07 53.7 9.7 32 7-45 2-33 (254)
312 PRK08217 fabG 3-ketoacyl-(acyl 96.9 0.016 3.5E-07 51.4 11.8 38 1-45 1-38 (253)
313 PRK07074 short chain dehydroge 96.9 0.0061 1.3E-07 54.6 9.0 33 6-45 3-35 (257)
314 PRK08605 D-lactate dehydrogena 96.9 0.0029 6.3E-08 59.5 7.1 62 5-91 146-208 (332)
315 PRK07904 short chain dehydroge 96.9 0.017 3.7E-07 51.9 11.9 118 3-133 6-145 (253)
316 PRK06935 2-deoxy-D-gluconate 3 96.9 0.003 6.6E-08 56.7 7.0 34 5-45 15-48 (258)
317 PRK06198 short chain dehydroge 96.9 0.016 3.4E-07 51.9 11.7 34 5-45 6-40 (260)
318 PRK13243 glyoxylate reductase; 96.8 0.004 8.7E-08 58.6 7.9 92 5-134 150-241 (333)
319 PRK05872 short chain dehydroge 96.8 0.0077 1.7E-07 55.5 9.7 118 5-134 9-143 (296)
320 PRK08251 short chain dehydroge 96.8 0.04 8.6E-07 48.9 14.0 103 6-119 3-123 (248)
321 PRK06841 short chain dehydroge 96.8 0.0048 1E-07 55.1 8.0 35 4-45 14-48 (255)
322 TIGR00465 ilvC ketol-acid redu 96.8 0.0088 1.9E-07 55.8 9.9 65 5-91 3-67 (314)
323 PRK06114 short chain dehydroge 96.8 0.0062 1.4E-07 54.5 8.6 35 4-45 7-41 (254)
324 cd00762 NAD_bind_malic_enz NAD 96.8 0.0015 3.2E-08 58.6 4.3 122 6-147 26-158 (254)
325 PF02826 2-Hacid_dh_C: D-isome 96.8 0.0053 1.1E-07 52.4 7.7 93 5-135 36-129 (178)
326 PRK06113 7-alpha-hydroxysteroi 96.8 0.0084 1.8E-07 53.7 9.3 119 5-134 11-146 (255)
327 PRK14806 bifunctional cyclohex 96.8 0.013 2.9E-07 61.0 12.0 94 6-133 4-97 (735)
328 PRK08862 short chain dehydroge 96.8 0.032 7E-07 49.3 12.9 46 1-57 1-46 (227)
329 PRK07985 oxidoreductase; Provi 96.8 0.011 2.5E-07 54.3 10.3 120 6-134 50-186 (294)
330 PRK12935 acetoacetyl-CoA reduc 96.8 0.0083 1.8E-07 53.3 9.1 120 5-134 6-143 (247)
331 PRK08226 short chain dehydroge 96.8 0.0064 1.4E-07 54.6 8.4 34 5-45 6-39 (263)
332 PRK08063 enoyl-(acyl carrier p 96.8 0.012 2.6E-07 52.3 10.1 34 5-45 4-38 (250)
333 PRK06407 ornithine cyclodeamin 96.8 0.0053 1.2E-07 56.9 8.0 75 4-91 116-190 (301)
334 PRK12825 fabG 3-ketoacyl-(acyl 96.8 0.0044 9.4E-08 54.7 7.2 34 5-45 6-39 (249)
335 PRK12557 H(2)-dependent methyl 96.8 0.012 2.6E-07 55.5 10.4 101 6-139 1-123 (342)
336 TIGR01832 kduD 2-deoxy-D-gluco 96.7 0.0043 9.3E-08 55.2 7.0 34 5-45 5-38 (248)
337 PRK06141 ornithine cyclodeamin 96.7 0.0058 1.3E-07 57.0 8.0 73 4-91 124-197 (314)
338 PRK08703 short chain dehydroge 96.7 0.025 5.4E-07 50.0 11.8 34 5-45 6-39 (239)
339 PLN02712 arogenate dehydrogena 96.7 0.021 4.5E-07 58.7 12.5 64 4-90 368-432 (667)
340 cd01487 E1_ThiF_like E1_ThiF_l 96.7 0.008 1.7E-07 51.1 8.1 32 7-45 1-32 (174)
341 PRK15469 ghrA bifunctional gly 96.7 0.011 2.4E-07 55.1 9.6 92 5-134 136-227 (312)
342 PRK07574 formate dehydrogenase 96.7 0.0089 1.9E-07 57.2 9.1 94 5-134 192-285 (385)
343 PRK06550 fabG 3-ketoacyl-(acyl 96.7 0.014 3E-07 51.4 9.8 113 5-134 5-127 (235)
344 PRK06949 short chain dehydroge 96.7 0.01 2.2E-07 53.0 9.1 34 5-45 9-42 (258)
345 COG1712 Predicted dinucleotide 96.7 0.0099 2.1E-07 52.0 8.4 96 6-136 1-96 (255)
346 PRK08618 ornithine cyclodeamin 96.7 0.0061 1.3E-07 57.2 7.8 74 5-91 127-200 (325)
347 TIGR01035 hemA glutamyl-tRNA r 96.7 0.0051 1.1E-07 59.7 7.4 105 5-140 180-284 (417)
348 PRK08324 short chain dehydroge 96.7 0.0072 1.6E-07 62.4 9.0 116 6-133 423-557 (681)
349 PRK07097 gluconate 5-dehydroge 96.7 0.0089 1.9E-07 53.9 8.6 118 5-135 10-147 (265)
350 cd05311 NAD_bind_2_malic_enz N 96.7 0.0034 7.4E-08 55.7 5.7 104 5-137 25-132 (226)
351 PRK06523 short chain dehydroge 96.7 0.0033 7.2E-08 56.4 5.7 34 5-45 9-42 (260)
352 TIGR02992 ectoine_eutC ectoine 96.6 0.0075 1.6E-07 56.6 8.1 73 5-91 129-202 (326)
353 PRK06947 glucose-1-dehydrogena 96.6 0.0083 1.8E-07 53.3 8.1 32 7-45 4-35 (248)
354 PRK06171 sorbitol-6-phosphate 96.6 0.0036 7.7E-08 56.4 5.8 34 5-45 9-42 (266)
355 PRK07578 short chain dehydroge 96.6 0.011 2.4E-07 50.8 8.6 105 6-133 1-111 (199)
356 PRK06924 short chain dehydroge 96.6 0.017 3.7E-07 51.4 10.1 33 6-45 2-34 (251)
357 PRK06484 short chain dehydroge 96.6 0.0043 9.4E-08 61.7 6.9 120 5-135 269-402 (520)
358 PLN02725 GDP-4-keto-6-deoxyman 96.6 0.0049 1.1E-07 56.6 6.8 95 9-133 1-100 (306)
359 PRK07340 ornithine cyclodeamin 96.6 0.0073 1.6E-07 56.1 7.9 73 4-92 124-197 (304)
360 PRK08220 2,3-dihydroxybenzoate 96.6 0.0051 1.1E-07 54.8 6.6 34 5-45 8-41 (252)
361 PRK06940 short chain dehydroge 96.6 0.028 6E-07 51.2 11.6 113 7-133 4-125 (275)
362 PRK07677 short chain dehydroge 96.6 0.052 1.1E-06 48.4 13.1 116 6-133 2-137 (252)
363 PRK12481 2-deoxy-D-gluconate 3 96.6 0.0033 7.2E-08 56.4 5.3 34 5-45 8-41 (251)
364 PRK08177 short chain dehydroge 96.6 0.0078 1.7E-07 52.8 7.6 33 6-45 2-34 (225)
365 PRK05693 short chain dehydroge 96.6 0.0082 1.8E-07 54.4 7.8 33 6-45 2-34 (274)
366 PRK08818 prephenate dehydrogen 96.6 0.014 3E-07 55.6 9.4 58 2-91 1-59 (370)
367 PRK06823 ornithine cyclodeamin 96.6 0.01 2.2E-07 55.3 8.4 74 4-91 127-200 (315)
368 PF02423 OCD_Mu_crystall: Orni 96.6 0.0061 1.3E-07 56.9 6.9 72 4-90 127-199 (313)
369 TIGR03649 ergot_EASG ergot alk 96.6 0.0096 2.1E-07 54.3 8.1 32 7-45 1-32 (285)
370 PRK05855 short chain dehydroge 96.5 0.0082 1.8E-07 60.2 8.2 118 5-134 315-452 (582)
371 PRK00258 aroE shikimate 5-dehy 96.5 0.012 2.6E-07 53.9 8.4 73 5-93 123-195 (278)
372 PRK13304 L-aspartate dehydroge 96.5 0.016 3.4E-07 52.8 9.2 67 6-91 2-69 (265)
373 PRK06728 aspartate-semialdehyd 96.5 0.0076 1.6E-07 56.8 7.2 77 1-92 1-77 (347)
374 PF04321 RmlD_sub_bind: RmlD s 96.5 0.0034 7.3E-08 57.7 4.8 98 6-133 1-100 (286)
375 PRK07791 short chain dehydroge 96.5 0.014 2.9E-07 53.6 8.8 35 4-45 5-39 (286)
376 TIGR01830 3oxo_ACP_reduc 3-oxo 96.5 0.0079 1.7E-07 52.9 7.0 118 8-135 1-136 (239)
377 PRK08415 enoyl-(acyl carrier p 96.5 0.0076 1.6E-07 55.0 7.0 36 3-45 3-40 (274)
378 PLN03139 formate dehydrogenase 96.5 0.013 2.9E-07 56.0 8.8 94 5-134 199-292 (386)
379 PLN02260 probable rhamnose bio 96.5 0.032 6.9E-07 57.5 12.2 87 5-123 380-473 (668)
380 COG1091 RfbD dTDP-4-dehydrorha 96.5 0.012 2.5E-07 53.7 7.9 95 6-133 1-99 (281)
381 PRK07589 ornithine cyclodeamin 96.4 0.0096 2.1E-07 56.2 7.4 73 5-91 129-201 (346)
382 TIGR02853 spore_dpaA dipicolin 96.4 0.0096 2.1E-07 54.8 7.2 102 5-145 151-253 (287)
383 PLN02858 fructose-bisphosphate 96.4 0.012 2.7E-07 65.0 9.2 68 2-91 1-68 (1378)
384 TIGR01746 Thioester-redct thio 96.4 0.034 7.4E-07 52.0 11.1 118 7-133 1-135 (367)
385 PRK07792 fabG 3-ketoacyl-(acyl 96.4 0.0096 2.1E-07 55.2 7.2 34 5-45 12-45 (306)
386 PRK06718 precorrin-2 dehydroge 96.4 0.013 2.9E-07 51.0 7.6 68 4-91 9-78 (202)
387 PRK06199 ornithine cyclodeamin 96.4 0.011 2.5E-07 56.5 7.7 77 4-91 154-231 (379)
388 PRK08040 putative semialdehyde 96.4 0.0089 1.9E-07 56.2 6.8 75 2-92 1-75 (336)
389 PRK08664 aspartate-semialdehyd 96.4 0.011 2.4E-07 56.0 7.5 37 1-45 1-37 (349)
390 PLN03129 NADP-dependent malic 96.4 0.0063 1.4E-07 60.5 6.0 118 6-147 322-453 (581)
391 PRK12824 acetoacetyl-CoA reduc 96.4 0.01 2.2E-07 52.5 6.9 33 6-45 3-35 (245)
392 PRK08993 2-deoxy-D-gluconate 3 96.4 0.021 4.5E-07 51.2 8.8 34 5-45 10-43 (253)
393 PRK05854 short chain dehydroge 96.3 0.065 1.4E-06 49.8 12.4 34 5-45 14-47 (313)
394 KOG0409|consensus 96.3 0.0065 1.4E-07 55.3 5.3 68 5-94 35-102 (327)
395 PRK12745 3-ketoacyl-(acyl-carr 96.3 0.04 8.6E-07 49.1 10.5 33 6-45 3-35 (256)
396 PRK14194 bifunctional 5,10-met 96.3 0.0096 2.1E-07 54.8 6.3 56 5-95 159-214 (301)
397 PRK07775 short chain dehydroge 96.3 0.053 1.1E-06 49.2 11.3 33 6-45 11-43 (274)
398 PRK08306 dipicolinate synthase 96.3 0.023 5E-07 52.6 8.9 67 5-91 152-218 (296)
399 PRK08589 short chain dehydroge 96.3 0.087 1.9E-06 47.7 12.6 34 5-45 6-39 (272)
400 PRK06484 short chain dehydroge 96.3 0.013 2.9E-07 58.3 7.8 118 4-133 4-140 (520)
401 PRK06079 enoyl-(acyl carrier p 96.3 0.01 2.2E-07 53.2 6.4 35 4-45 6-42 (252)
402 PRK07577 short chain dehydroge 96.3 0.021 4.5E-07 50.2 8.3 34 5-45 3-36 (234)
403 COG3967 DltE Short-chain dehyd 96.3 0.019 4.2E-07 49.6 7.6 117 3-133 3-138 (245)
404 TIGR01809 Shik-DH-AROM shikima 96.3 0.01 2.3E-07 54.5 6.5 75 5-92 125-199 (282)
405 PRK13302 putative L-aspartate 96.3 0.0093 2E-07 54.5 6.1 68 5-92 6-76 (271)
406 PRK07201 short chain dehydroge 96.3 0.021 4.6E-07 58.5 9.4 116 5-133 371-508 (657)
407 TIGR00936 ahcY adenosylhomocys 96.3 0.021 4.5E-07 55.0 8.6 91 4-135 194-284 (406)
408 PRK06953 short chain dehydroge 96.3 0.019 4.1E-07 50.3 7.9 112 7-133 3-129 (222)
409 PLN02494 adenosylhomocysteinas 96.3 0.02 4.3E-07 55.9 8.5 90 5-135 254-343 (477)
410 PRK13940 glutamyl-tRNA reducta 96.3 0.0091 2E-07 57.8 6.3 74 5-95 181-254 (414)
411 COG2423 Predicted ornithine cy 96.2 0.013 2.8E-07 54.8 7.0 73 5-90 130-202 (330)
412 PRK12743 oxidoreductase; Provi 96.2 0.099 2.2E-06 46.7 12.7 33 6-45 3-35 (256)
413 PLN02928 oxidoreductase family 96.2 0.015 3.4E-07 54.9 7.6 104 5-134 159-263 (347)
414 PRK08644 thiamine biosynthesis 96.2 0.022 4.9E-07 50.0 8.2 34 5-45 28-61 (212)
415 PRK05671 aspartate-semialdehyd 96.2 0.011 2.5E-07 55.5 6.6 75 2-92 1-75 (336)
416 PRK07831 short chain dehydroge 96.2 0.048 1E-06 49.0 10.5 34 5-45 17-51 (262)
417 PRK00045 hemA glutamyl-tRNA re 96.2 0.019 4.1E-07 55.9 8.3 106 4-139 181-286 (423)
418 PRK12938 acetyacetyl-CoA reduc 96.2 0.021 4.5E-07 50.6 8.1 31 6-43 4-34 (246)
419 PRK08936 glucose-1-dehydrogena 96.2 0.026 5.6E-07 50.7 8.7 34 5-45 7-40 (261)
420 cd00401 AdoHcyase S-adenosyl-L 96.2 0.023 5E-07 54.9 8.7 90 5-135 202-291 (413)
421 TIGR00507 aroE shikimate 5-deh 96.2 0.024 5.2E-07 51.7 8.5 72 5-93 117-188 (270)
422 TIGR02632 RhaD_aldol-ADH rhamn 96.2 0.028 6E-07 58.1 9.8 34 5-45 414-447 (676)
423 PLN02968 Probable N-acetyl-gam 96.1 0.016 3.4E-07 55.5 7.1 35 5-45 38-72 (381)
424 PRK06720 hypothetical protein; 96.1 0.073 1.6E-06 45.0 10.5 35 4-45 15-49 (169)
425 PTZ00075 Adenosylhomocysteinas 96.1 0.018 3.9E-07 56.3 7.5 91 4-135 253-343 (476)
426 COG1064 AdhP Zn-dependent alco 96.1 0.047 1E-06 51.1 10.0 94 5-136 167-262 (339)
427 PTZ00317 NADP-dependent malic 96.1 0.014 3.1E-07 57.7 6.8 123 6-147 298-433 (559)
428 PLN00203 glutamyl-tRNA reducta 96.1 0.011 2.4E-07 58.7 6.2 74 5-93 266-339 (519)
429 COG0111 SerA Phosphoglycerate 96.1 0.019 4.1E-07 53.8 7.3 92 5-134 142-234 (324)
430 PRK05476 S-adenosyl-L-homocyst 96.1 0.026 5.6E-07 54.7 8.4 91 4-135 211-301 (425)
431 PLN02996 fatty acyl-CoA reduct 96.1 0.11 2.4E-06 51.6 13.1 112 5-122 11-150 (491)
432 PLN00016 RNA-binding protein; 96.1 0.042 9.1E-07 52.5 9.8 34 5-45 52-89 (378)
433 PF00185 OTCace: Aspartate/orn 96.1 0.03 6.4E-07 46.8 7.7 78 4-90 1-80 (158)
434 PF03435 Saccharop_dh: Sacchar 96.1 0.0032 6.9E-08 60.4 2.1 75 8-93 1-77 (386)
435 cd01483 E1_enzyme_family Super 96.1 0.046 1E-06 44.6 8.8 32 7-45 1-32 (143)
436 PRK06436 glycerate dehydrogena 96.1 0.024 5.3E-07 52.5 7.8 92 5-137 122-215 (303)
437 PRK06123 short chain dehydroge 96.1 0.03 6.6E-07 49.6 8.3 33 6-45 3-35 (248)
438 PF07991 IlvN: Acetohydroxy ac 96.0 0.046 9.9E-07 45.6 8.5 64 5-90 4-67 (165)
439 cd01080 NAD_bind_m-THF_DH_Cycl 96.0 0.016 3.4E-07 49.0 6.0 54 5-94 44-98 (168)
440 PRK09009 C factor cell-cell si 96.0 0.026 5.6E-07 49.7 7.7 76 6-94 1-78 (235)
441 PRK08261 fabG 3-ketoacyl-(acyl 96.0 0.025 5.4E-07 55.3 8.2 117 5-134 210-343 (450)
442 PF05368 NmrA: NmrA-like famil 96.0 0.019 4.1E-07 50.8 6.8 93 8-123 1-94 (233)
443 PRK08303 short chain dehydroge 96.0 0.048 1E-06 50.6 9.7 38 1-45 2-41 (305)
444 TIGR02356 adenyl_thiF thiazole 96.0 0.043 9.2E-07 47.8 8.8 34 5-45 21-54 (202)
445 PRK06046 alanine dehydrogenase 96.0 0.022 4.7E-07 53.5 7.3 74 4-91 128-201 (326)
446 PRK07533 enoyl-(acyl carrier p 96.0 0.027 5.8E-07 50.7 7.6 34 5-45 10-45 (258)
447 cd01075 NAD_bind_Leu_Phe_Val_D 96.0 0.026 5.6E-07 49.1 7.2 33 5-45 28-60 (200)
448 PRK06505 enoyl-(acyl carrier p 96.0 0.06 1.3E-06 48.9 9.9 35 4-45 6-42 (271)
449 PLN02858 fructose-bisphosphate 95.9 0.035 7.6E-07 61.5 9.7 66 5-92 324-389 (1378)
450 PRK06719 precorrin-2 dehydroge 95.9 0.07 1.5E-06 44.6 9.4 65 5-90 13-77 (157)
451 cd00757 ThiF_MoeB_HesA_family 95.9 0.028 6.2E-07 49.9 7.3 34 5-45 21-54 (228)
452 PRK00257 erythronate-4-phospha 95.9 0.026 5.7E-07 54.0 7.4 60 5-91 116-175 (381)
453 PRK12475 thiamine/molybdopteri 95.9 0.03 6.5E-07 52.8 7.8 34 5-45 24-57 (338)
454 TIGR01829 AcAcCoA_reduct aceto 95.9 0.12 2.5E-06 45.5 11.3 31 7-44 2-32 (242)
455 TIGR01289 LPOR light-dependent 95.9 0.024 5.3E-07 52.7 7.1 117 6-133 4-142 (314)
456 COG0373 HemA Glutamyl-tRNA red 95.8 0.019 4.2E-07 55.1 6.3 73 5-95 178-250 (414)
457 PLN02306 hydroxypyruvate reduc 95.8 0.041 8.8E-07 52.8 8.5 105 5-134 165-273 (386)
458 PRK00048 dihydrodipicolinate r 95.8 0.023 5E-07 51.5 6.5 65 6-90 2-67 (257)
459 PRK13529 malate dehydrogenase; 95.8 0.017 3.7E-07 57.3 6.0 125 6-147 296-434 (563)
460 PF02882 THF_DHG_CYH_C: Tetrah 95.8 0.029 6.3E-07 47.0 6.5 56 5-95 36-91 (160)
461 PRK15438 erythronate-4-phospha 95.8 0.023 5E-07 54.3 6.6 60 5-91 116-175 (378)
462 PRK06483 dihydromonapterin red 95.8 0.033 7.1E-07 49.1 7.3 33 6-45 3-35 (236)
463 KOG1371|consensus 95.8 0.1 2.2E-06 48.3 10.4 107 5-123 2-119 (343)
464 PRK08416 7-alpha-hydroxysteroi 95.8 0.11 2.4E-06 46.6 10.9 34 5-45 8-41 (260)
465 PRK07984 enoyl-(acyl carrier p 95.8 0.023 5.1E-07 51.4 6.4 34 5-45 6-41 (262)
466 PRK05599 hypothetical protein; 95.8 0.11 2.5E-06 46.2 10.8 116 7-135 2-138 (246)
467 COG0002 ArgC Acetylglutamate s 95.8 0.024 5.3E-07 52.8 6.4 35 5-45 2-36 (349)
468 PRK07688 thiamine/molybdopteri 95.8 0.043 9.3E-07 51.8 8.2 34 5-45 24-57 (339)
469 PRK14027 quinate/shikimate deh 95.7 0.021 4.7E-07 52.4 6.0 74 5-91 127-202 (283)
470 cd01079 NAD_bind_m-THF_DH NAD 95.7 0.03 6.4E-07 48.2 6.4 77 5-95 62-138 (197)
471 PLN02383 aspartate semialdehyd 95.7 0.029 6.3E-07 53.0 7.0 74 3-92 5-78 (344)
472 TIGR01327 PGDH D-3-phosphoglyc 95.7 0.031 6.7E-07 55.9 7.5 92 5-133 138-229 (525)
473 TIGR01745 asd_gamma aspartate- 95.7 0.07 1.5E-06 50.6 9.4 72 6-92 1-73 (366)
474 PRK06598 aspartate-semialdehyd 95.7 0.07 1.5E-06 50.7 9.4 72 6-92 2-74 (369)
475 PRK09496 trkA potassium transp 95.7 0.028 6E-07 55.0 7.0 71 6-91 1-73 (453)
476 COG1088 RfbB dTDP-D-glucose 4, 95.7 0.069 1.5E-06 48.8 8.7 119 6-133 1-125 (340)
477 PRK07041 short chain dehydroge 95.7 0.033 7.1E-07 48.8 6.7 112 9-133 1-123 (230)
478 PRK14179 bifunctional 5,10-met 95.6 0.026 5.6E-07 51.6 6.0 56 5-95 158-213 (284)
479 PRK07370 enoyl-(acyl carrier p 95.6 0.041 8.9E-07 49.5 7.3 38 1-45 1-41 (258)
480 PRK00436 argC N-acetyl-gamma-g 95.6 0.045 9.7E-07 51.8 7.6 25 6-30 3-27 (343)
481 smart00859 Semialdhyde_dh Semi 95.6 0.12 2.5E-06 41.0 9.0 23 7-29 1-23 (122)
482 PF00670 AdoHcyase_NAD: S-aden 95.6 0.039 8.5E-07 46.1 6.3 67 4-93 22-88 (162)
483 PF00899 ThiF: ThiF family; I 95.5 0.017 3.7E-07 46.7 4.2 34 5-45 2-35 (135)
484 PF02254 TrkA_N: TrkA-N domain 95.5 0.044 9.5E-07 42.8 6.4 30 8-45 1-30 (116)
485 PRK14874 aspartate-semialdehyd 95.5 0.034 7.3E-07 52.4 6.6 71 6-92 2-72 (334)
486 PRK08017 oxidoreductase; Provi 95.5 0.049 1.1E-06 48.5 7.5 33 6-45 3-35 (256)
487 KOG1200|consensus 95.5 0.24 5.2E-06 42.7 10.8 126 5-141 14-158 (256)
488 PRK13581 D-3-phosphoglycerate 95.5 0.039 8.5E-07 55.2 7.3 92 5-134 140-231 (526)
489 PRK12548 shikimate 5-dehydroge 95.5 0.056 1.2E-06 49.8 7.7 79 5-91 126-207 (289)
490 cd05212 NAD_bind_m-THF_DH_Cycl 95.5 0.048 1E-06 44.6 6.5 56 4-94 27-82 (140)
491 TIGR01831 fabG_rel 3-oxoacyl-( 95.5 0.045 9.8E-07 48.2 6.9 31 8-45 1-31 (239)
492 COG0289 DapB Dihydrodipicolina 95.5 0.17 3.6E-06 45.6 10.3 74 5-89 2-75 (266)
493 COG1052 LdhA Lactate dehydroge 95.4 0.066 1.4E-06 50.1 8.2 92 5-134 146-237 (324)
494 PRK08594 enoyl-(acyl carrier p 95.4 0.28 6.1E-06 44.0 12.1 38 1-45 1-42 (257)
495 PRK09730 putative NAD(P)-bindi 95.4 0.054 1.2E-06 47.8 7.3 32 7-45 3-35 (247)
496 cd01485 E1-1_like Ubiquitin ac 95.4 0.059 1.3E-06 46.8 7.2 34 5-45 19-52 (198)
497 TIGR01850 argC N-acetyl-gamma- 95.4 0.051 1.1E-06 51.4 7.4 34 6-45 1-35 (346)
498 PRK14106 murD UDP-N-acetylmura 95.4 0.069 1.5E-06 52.2 8.5 100 4-120 4-104 (450)
499 PRK03659 glutathione-regulated 95.4 0.12 2.7E-06 52.5 10.5 140 6-183 401-543 (601)
500 PRK08410 2-hydroxyacid dehydro 95.4 0.064 1.4E-06 50.0 7.8 88 5-134 145-233 (311)
No 1
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-73 Score=527.21 Aligned_cols=323 Identities=57% Similarity=0.960 Sum_probs=297.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
|++++||+||||+|+||+++|+.|+..+++++++|.||+|+|++ +++++++|.++|++|+..++..+++++++.|+++
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~--~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~ 78 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIP--PALKALEGVVMELDDCAFPLLAGVVITDDPNVAF 78 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecC--CcccccceeehhhhhhhhhhcCCcEEecChHHHh
Confidence 78899999999889999999999999999987677899999997 2256789999999998756555667888889999
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL 161 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l 161 (329)
+|||+||+++|.|+++|++|.+++..|++++++++++|+++++|++++|++|||+|+||+++++++|+||++||+|.|.|
T Consensus 79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~L 158 (326)
T PRK05442 79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRL 158 (326)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeeeHH
Confidence 99999999999999999999999999999999999999998768999999999999999999999999999998777999
Q ss_pred HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCc
Q psy9582 162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGAS 241 (329)
Q Consensus 162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~ 241 (329)
||+||++++|++++++|++|++++||||||+++||+||+++++|+|+.+++.++ .|..+++.+++++++++|++.||++
T Consensus 159 Ds~R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v~g~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~kG~t 237 (326)
T PRK05442 159 DHNRALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATIDGKPAAEVINDQ-AWLEDTFIPTVQKRGAAIIEARGAS 237 (326)
T ss_pred HHHHHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEECCEEHHHHccch-hhHHHHHHHHHHhhHHHHHhCcCCc
Confidence 999999999999999999999987899999999999999999999999988654 5667899999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582 242 SAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELK 318 (329)
Q Consensus 242 ~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~ 318 (329)
+|++++++++ .+++++++| + +++|||++++|+||+|+|+|||+||++.+|+++++.+++|+++|+++|++|++.|+
T Consensus 238 ~~~~a~~~~~-~iv~ail~~~~~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig~Gv~~iv~~l~L~~~E~~~l~~s~~~l~ 316 (326)
T PRK05442 238 SAASAANAAI-DHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQGLEIDDFSREKIDATLAELE 316 (326)
T ss_pred cHHHHHHHHH-HHHHHHHhCCCCCeEEEEEEEecCccCCcCCeEEEEEEEEcCcEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 9988876434 788887777 7 99999999999999999999999999999999996669999999999999999999
Q ss_pred HHHHHHHhhh
Q psy9582 319 NEILSISHLI 328 (329)
Q Consensus 319 ~~~~~~~~~~ 328 (329)
++.+.+.++|
T Consensus 317 ~~~~~~~~~~ 326 (326)
T PRK05442 317 EERDAVKHLL 326 (326)
T ss_pred HHHHHHHhhC
Confidence 9999998875
No 2
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=9.7e-72 Score=516.18 Aligned_cols=316 Identities=52% Similarity=0.884 Sum_probs=289.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
+++.||+||||+|+||+++++.|+..++++.++++||+|+|++ ++.++++|.++|++|...+...+++++.+.|++++
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~--~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~ 78 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIP--PAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFK 78 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecC--CcccccchHHHHHhhccccccCCcEEecChHHHhC
Confidence 4689999999889999999999999999876667799999997 22466899999999987555556677778899999
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCC-CeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR-DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL 161 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p-~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l 161 (329)
|||+||++||.|+++|++|.+++..|++++++++++|++++ | ++++|++|||+|+||+++++++++||++||+|+|.|
T Consensus 79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~-~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~L 157 (323)
T TIGR01759 79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA-KKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRL 157 (323)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEeeHH
Confidence 99999999999999999999999999999999999999998 6 999999999999999999999989999998778999
Q ss_pred HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCc
Q psy9582 162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGAS 241 (329)
Q Consensus 162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~ 241 (329)
||+||++++|++++++|++|+.++||||||++++|+||+++++|+|+.+++.++ .|+.+++.+++++++++|++.||++
T Consensus 158 Ds~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~g~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~kG~t 236 (323)
T TIGR01759 158 DHNRAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATVDGRPVKEVIKDD-KWLEGEFIPTVQQRGAAVIEARGAS 236 (323)
T ss_pred HHHHHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEECCccHHHHhcch-hhHHHHHHHHHHhhHHHHHhccCCc
Confidence 999999999999999999998777999999999999999999999999987654 4667899999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCC-CCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582 242 SAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDG-SYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE 316 (329)
Q Consensus 242 ~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g-~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~ 316 (329)
+|+++|++++ ++++++++| + +++|||++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|++.
T Consensus 237 ~~~~~a~a~~-~iv~ail~~~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l~~sa~~ 315 (323)
T TIGR01759 237 SAASAANAAI-DHVRDWVTGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKLDATEDE 315 (323)
T ss_pred chHHHHHHHH-HHHHHHHcCCCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHH
Confidence 9976665544 788888877 3 89999999999 9999999999999999 999999998799999999999999999
Q ss_pred HHHHHHH
Q psy9582 317 LKNEILS 323 (329)
Q Consensus 317 i~~~~~~ 323 (329)
|+++++.
T Consensus 316 lk~~~~~ 322 (323)
T TIGR01759 316 LLEEKEE 322 (323)
T ss_pred HHHHHhc
Confidence 9999865
No 3
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=1.8e-71 Score=504.69 Aligned_cols=305 Identities=29% Similarity=0.451 Sum_probs=280.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a 84 (329)
+||+|||| |+||+++|+.|+..++.. |++|+|++ +++++|.++||.|..........++. +.+++++||
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~-----el~LiDi~----~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGS-----ELVLIDIN----EEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGA 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccc-----eEEEEEcc----cccccchhcchhhcchhccCceEEecCCChhhhcCC
Confidence 58999999 999999999998777765 99999999 88899999999998755444566655 558999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEechhHH
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLRLDH 163 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds 163 (329)
|+|+++||.||||||+|.|++..|+.+++++++++.++| ||++++++|||+|+|||++++.+ ++|++| |+++|.|||
T Consensus 71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD~~ty~~~k~s-g~p~~rvig~gt~LDs 148 (313)
T COG0039 71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVDILTYIAMKFS-GFPKNRVIGSGTVLDS 148 (313)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHHHHHHHHHHhc-CCCccceecccchHHH
Confidence 999999999999999999999999999999999999998 99999999999999999999999 899999 677899999
Q ss_pred HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhc-cCccchhhhHHHHHhhhhHHHHHhcCC-c
Q psy9582 164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMIN-NNSFWNKNVFLPAISRRGEEIISIRGA-S 241 (329)
Q Consensus 164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~-~~~~~~~~~l~~~v~~~~~~i~~~kg~-~ 241 (329)
+||++++|++++++|++|+++ |+|+||+++||+||+++++|+|+.++++ .+ .|..+++.+++++++++|++.||+ +
T Consensus 149 aR~~~~lae~~~v~~~~V~~~-ViGeHGdt~vp~~S~a~v~G~pl~~~~~~~~-~~~~~~i~~~v~~~g~eII~~kG~~t 226 (313)
T COG0039 149 ARFRTFLAEKLGVSPKDVHAY-VIGEHGDTMVPLWSQATVGGKPLEELLKEDT-EEDLEELIERVRNAGAEIIEAKGAGT 226 (313)
T ss_pred HHHHHHHHHHhCCChhHceee-EeccCCCceEEeeeeeeECCEEHHHHhhccc-HhHHHHHHHHHHhhHHHHHHccCccc
Confidence 999999999999999999988 7889999999999999999999999997 34 578899999999999999999987 4
Q ss_pred cHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582 242 SAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN 319 (329)
Q Consensus 242 ~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~ 319 (329)
.|++++ ++.++.++|+.|+ +|+|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.+|+
T Consensus 227 ~~~~A~--a~a~~~~ail~d~~~vl~~s~~l~G~yg~-~dv~~gvP~~lg~~Gv~~iie-~~l~~~E~~~l~~s~~~lk~ 302 (313)
T COG0039 227 YYGPAA--ALARMVEAILRDEKRVLPVSVYLDGEYGV-EDVYFGVPAVLGKNGVEEILE-LLLSDDEQEKLDKSAEELKK 302 (313)
T ss_pred hhhHHH--HHHHHHHHHHcCCCceEEEEEeecCccCc-CCeEEEeeEEEcCCCcEEEec-CCCCHHHHHHHHHHHHHHHH
Confidence 444443 3558999999998 999999999999995 89999999999 999999999 99999999999999999999
Q ss_pred HHHHHHhhh
Q psy9582 320 EILSISHLI 328 (329)
Q Consensus 320 ~~~~~~~~~ 328 (329)
.++.+.+++
T Consensus 303 ~i~~~~~~~ 311 (313)
T COG0039 303 NIELVKELV 311 (313)
T ss_pred HHHHHHHhh
Confidence 999998874
No 4
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=3.7e-70 Score=512.66 Aligned_cols=317 Identities=41% Similarity=0.722 Sum_probs=288.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE--ecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL--EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~--D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
++.||+||||+|+||+++|+.|+.+++++.+++++|+|+ |++ +++++|.++||+|+.+++..+++++++.++++
T Consensus 43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~----~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~ 118 (387)
T TIGR01757 43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERS----KEALEGVAMELEDSLYPLLREVSIGIDPYEVF 118 (387)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCcc----chhhhHHHHHHHHhhhhhcCceEEecCCHHHh
Confidence 478999999999999999999999999987777888899 555 88899999999998766656677778889999
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEech
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLR 160 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~ 160 (329)
+|||+||+++|.|++||++|.+++..|+++++++++.|+++++|++++|++|||+|+||+++++.+ +++|+| |+++|.
T Consensus 119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~s-g~~~~rviG~gT~ 197 (387)
T TIGR01757 119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKNA-PNIPRKNFHALTR 197 (387)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHHc-CCCcccEEEecch
Confidence 999999999999999999999999999999999999999987799999999999999999999999 777777 678899
Q ss_pred hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCC
Q psy9582 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240 (329)
Q Consensus 161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~ 240 (329)
|||+|+++++|++++++|++|+..+||||||++|||+||+++|+|+|+.+++.+. .|..+++.+++++++++|++.||+
T Consensus 198 LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V~G~pl~~~~~~~-~~~~~ei~~~v~~~g~eIi~~KG~ 276 (387)
T TIGR01757 198 LDENRAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKIGGRPAKEVIKDT-KWLEEEFTPTVQKRGGALIKKWGR 276 (387)
T ss_pred hHHHHHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEECCEEhHHhcccc-cchHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999997555999999999999999999999999988664 577889999999999999999998
Q ss_pred ccHHHHHHHHHHHHHHHHh--CCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEec-cCCCCCHHHHHHHHHHH
Q psy9582 241 SSAASAASAAIDHIKDWIF--GTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKII-QNLEIDKFSRKKINLSI 314 (329)
Q Consensus 241 ~~~~~~a~~~~~~l~~~i~--~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~-~~~~l~~~E~~~l~~s~ 314 (329)
++|++.+++++ +++.+|. +|+ +++|+|++++|+ ||+|+|+|||+||++ ++|+++++ + ++|+++|+++|++|+
T Consensus 277 t~~~s~a~ai~-~~i~ai~~g~d~~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~-l~L~~~E~~~l~~Sa 354 (387)
T TIGR01757 277 SSAASTAVSIA-DAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATD-VSMDDFLRERIRKSE 354 (387)
T ss_pred hhHHHHHHHHH-HHHHHHhcCCCCCeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCC-CCCCHHHHHHHHHHH
Confidence 88855555555 5666666 677 999999999996 999899999999999 99999997 7 999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q psy9582 315 EELKNEILSISHLI 328 (329)
Q Consensus 315 ~~i~~~~~~~~~~~ 328 (329)
++|+++.+.+.+++
T Consensus 355 ~~L~~e~~~~~~~~ 368 (387)
T TIGR01757 355 DELLKEKECVAHLI 368 (387)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887754
No 5
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=5.1e-70 Score=518.59 Aligned_cols=318 Identities=41% Similarity=0.704 Sum_probs=290.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCc--eEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPI--ILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~--ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
++.||+||||+|+||+++++.|+.+++++.++++ ||+|+|++ +++++|.++||+|...++..++.++++.|+++
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~----~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~ 174 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERS----KQALEGVAMELEDSLYPLLREVSIGIDPYEVF 174 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCC----cchhHHHHHHHHHhhhhhcCceEEecCCHHHh
Confidence 4689999999999999999999999888877754 99999999 88999999999998766666788788889999
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEech
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLR 160 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~ 160 (329)
+|||+||+++|.|+++|++|.+++..|++++++++++|+++++|+++||++|||+|+||+++++.+ +++++| |+.+|.
T Consensus 175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~s-g~~~~rViGtgT~ 253 (444)
T PLN00112 175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNA-PNIPAKNFHALTR 253 (444)
T ss_pred CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHc-CCCCcceEEeecc
Confidence 999999999999999999999999999999999999999953599999999999999999999999 666666 788899
Q ss_pred hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCC
Q psy9582 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGA 240 (329)
Q Consensus 161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~ 240 (329)
|||+||++++|++++++|++|++.+||||||++|||+||+++|+|+|+.+++.+. .|+.+++.+++++++++|++.||+
T Consensus 254 LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V~G~pl~e~i~~~-~~~~~ei~~~v~~~g~~Ii~~kG~ 332 (444)
T PLN00112 254 LDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKINGLPVKEVITDH-KWLEEEFTPKVQKRGGVLIKKWGR 332 (444)
T ss_pred HHHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEECCccHHHhhccc-cchHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999998766999999999999999999999999998765 677899999999999999999998
Q ss_pred ccHHHHHHHHHHHHHHHHh--CCC-cEEEEEeecCC-CCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582 241 SSAASAASAAIDHIKDWIF--GTE-NWVTMGIPSDG-SYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE 315 (329)
Q Consensus 241 ~~~~~~a~~~~~~l~~~i~--~~~-~i~~~~v~~~g-~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 315 (329)
++|++.+.+++ +++.+|+ .|+ +|+|+|++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|++
T Consensus 333 t~~~s~a~ai~-~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el~L~~~E~~~l~~Sa~ 411 (444)
T PLN00112 333 SSAASTAVSIA-DAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDVEIDDYLRERIKKSEA 411 (444)
T ss_pred hhHHHHHHHHH-HHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCCCCCHHHHHHHHHHHH
Confidence 88855555444 6677776 677 99999999999 5999899999999999 99999999339999999999999999
Q ss_pred HHHHHHHHHHhhh
Q psy9582 316 ELKNEILSISHLI 328 (329)
Q Consensus 316 ~i~~~~~~~~~~~ 328 (329)
+|+++.+.+.+++
T Consensus 412 ~L~~e~~~~~~~~ 424 (444)
T PLN00112 412 ELLAEKRCVAHLT 424 (444)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988875
No 6
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=6e-69 Score=498.23 Aligned_cols=317 Identities=52% Similarity=0.874 Sum_probs=290.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
+++||+||||+|+||+++++.|+..++++.++++||+|+|++ ++.++++|+++|++|...++..+++++++.+++++|
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~--~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~d 78 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELP--QALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKD 78 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecC--CcccccceeehhhhhccccccCceEEecCcHHHhCC
Confidence 478999999889999999999999999987677899999997 225668999999999876655567787888999999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDH 163 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds 163 (329)
||+||+++|.|+++|++|.+++..|++++++++++|+++++|++++|++|||+|+||+++++.++++|++|++|.|.||+
T Consensus 79 aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs 158 (322)
T cd01338 79 ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDH 158 (322)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHH
Confidence 99999999999999999999999999999999999999974599999999999999999999996699999888899999
Q ss_pred HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccH
Q psy9582 164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSA 243 (329)
Q Consensus 164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~ 243 (329)
+|+++.+|+++|+++++|++++|||+||++++|+||+++++|+|+.+++.+. .|..+++.+++++++++|++.||+++|
T Consensus 159 ~Rl~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v~g~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~kG~t~~ 237 (322)
T cd01338 159 NRAKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATIGGKPAAEVINDR-AWLEDEFIPTVQKRGAAIIKARGASSA 237 (322)
T ss_pred HHHHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEECCEeHHHhcChH-hhHHHHHHHHHHhhHHHHHhCcCCccH
Confidence 9999999999999999999977899999999999999999999999887654 566789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCC---cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582 244 ASAASAAIDHIKDWIFGTE---NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN 319 (329)
Q Consensus 244 ~~~a~~~~~~l~~~i~~~~---~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~ 319 (329)
++++++++ .+++++++|+ +++|+|++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus 238 ~~~a~a~~-~iv~ail~~~~~~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~l~~ 315 (322)
T cd01338 238 ASAANAAI-DHMRDWVLGTPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEG-LEIDDFAREKIDATLAELLE 315 (322)
T ss_pred HHHHHHHH-HHHHHHhcCCCCCeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeC-CCCCHHHHHHHHHHHHHHHH
Confidence 88864444 7888888774 899999999999999999999999999 999999998 99999999999999999999
Q ss_pred HHHHHH
Q psy9582 320 EILSIS 325 (329)
Q Consensus 320 ~~~~~~ 325 (329)
+.+.+.
T Consensus 316 ~~~~~~ 321 (322)
T cd01338 316 EREAVK 321 (322)
T ss_pred HHHHhh
Confidence 998764
No 7
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2e-68 Score=491.73 Aligned_cols=297 Identities=16% Similarity=0.309 Sum_probs=272.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCCc
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKDA 84 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~a 84 (329)
||+|||| |+||+++|+.|+..++++ ||+|+|++ +++++|.++||+|.. ++. .+++++.+.|++++||
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~-----elvL~Di~----~~~a~g~a~DL~~~~-~~~~~~~~~i~~~~y~~~~~a 69 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFS-----EIVLIDVN----EGVAEGEALDFHHAT-ALTYSTNTKIRAGDYDDCADA 69 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----cchhhHHHHHHHhhh-ccCCCCCEEEEECCHHHhCCC
Confidence 7999999 999999999999999988 99999999 788999999999975 332 2566666779999999
Q ss_pred cEEEEeCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechh
Q psy9582 85 NIAILIGSFPRKSNME--RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRL 161 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~--~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l 161 (329)
|+||+++|.|++||++ |.+++..|+++++++++++.+++ |++++|++|||+|+||+++++.+ ++|++|+ +.||.|
T Consensus 70 DivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvDv~t~~~~k~s-g~p~~rviG~gt~L 147 (307)
T cd05290 70 DIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLDIAVYIAATEF-DYPANKVIGTGTML 147 (307)
T ss_pred CEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHHHHHHHHHHHh-CcChhheecccchH
Confidence 9999999999999999 69999999999999999999998 99999999999999999999999 9999995 566999
Q ss_pred HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhcc--CccchhhhHHHHHhhhhHHHHHhcC
Q psy9582 162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINN--NSFWNKNVFLPAISRRGEEIISIRG 239 (329)
Q Consensus 162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~--~~~~~~~~l~~~v~~~~~~i~~~kg 239 (329)
||+||++++|++++++|++|+++ ||||||++++|+||+++++|+|+.++++. ...+..+++.+++++++++|++.||
T Consensus 148 Ds~R~~~~la~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~KG 226 (307)
T cd05290 148 DTARLRRIVADKYGVDPKNVTGY-VLGEHGSHAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRKG 226 (307)
T ss_pred HHHHHHHHHHHHhCCCcccEEEE-EEecCCCceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999998 89999999999999999999999988742 1134568899999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHH
Q psy9582 240 ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEEL 317 (329)
Q Consensus 240 ~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i 317 (329)
+|+|+++. ++.+++++|++|+ +++|+|++++|+|| ++|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus 227 ~t~~~ia~--a~~~ii~ail~d~~~v~~vsv~~~G~yg-~~~v~~svP~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~i 302 (307)
T cd05290 227 WTNAGIAK--SASRLIKAILLDERSILPVCTLLSGEYG-LSDVALSLPTVIGAKGIERVLE-IPLDEWELEKLHKSAKAI 302 (307)
T ss_pred eehHHHHH--HHHHHHHHHHhCCCeEEEEEEeeCCccC-CCCEEEEEEEEEeCCCceEecC-CCCCHHHHHHHHHHHHHH
Confidence 99998865 3458999999998 99999999999999 589999999999 999999999 999999999999999999
Q ss_pred HHHH
Q psy9582 318 KNEI 321 (329)
Q Consensus 318 ~~~~ 321 (329)
++.+
T Consensus 303 ~~~~ 306 (307)
T cd05290 303 RETI 306 (307)
T ss_pred HHHh
Confidence 9875
No 8
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.7e-68 Score=495.35 Aligned_cols=314 Identities=46% Similarity=0.713 Sum_probs=282.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
.||+||||+|++|+++++.|+..++++.+++.+|+|+|+++ ..+++++.++|+.|...+....++++.+.+++++|||
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~--~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aD 78 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP--AMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVD 78 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC--ccCccceeeeehhhhcccccCCcEEecChHHHhCCCC
Confidence 48999999999999999999999998844456799999992 1278899999999987566555677778899999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCC-CCCCcEEEechhHHH
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPD-LSYKNFTAMLRLDHN 164 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~-~~~~~i~~~t~lds~ 164 (329)
+||++||.|++||++|.+++..|++++++++++|+++|+|++++|++|||+|+||+++++++ + +|++||+|+|.|||+
T Consensus 79 iVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~s-g~~p~~~vig~t~LDs~ 157 (323)
T cd00704 79 VAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKNA-PNLPPKNFTALTRLDHN 157 (323)
T ss_pred EEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHc-CCCCHHHEEEeeHHHHH
Confidence 99999999999999999999999999999999999996699999999999999999999999 6 699998888999999
Q ss_pred HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC--ccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582 165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SFWNKNVFLPAISRRGEEIISIRGASS 242 (329)
Q Consensus 165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~--~~~~~~~l~~~v~~~~~~i~~~kg~~~ 242 (329)
||++++|++++++|++|++++||||||++++|+||+++++|.|+.++.+.. +.|..+++.+++++++++|++.||+++
T Consensus 158 R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~t~ 237 (323)
T cd00704 158 RAKAQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGASS 237 (323)
T ss_pred HHHHHHHHHhCcCHHHceeeeEEecccCceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCcch
Confidence 999999999999999998777999999999999999999999998875221 145678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCC-C--cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHH
Q psy9582 243 AASAASAAIDHIKDWIFGT-E--NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEEL 317 (329)
Q Consensus 243 ~~~~a~~~~~~l~~~i~~~-~--~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i 317 (329)
|++.|+++ .+++++|++| + +++|||++++|+| |+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus 238 ~~~~a~a~-~~iv~ail~~~~~~~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~-l~L~~~E~~~l~~s~~~l 315 (323)
T cd00704 238 AASAAKAI-ADHVKDWLFGTPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVED-LKLNDWLREKLKATEEEL 315 (323)
T ss_pred hHHHHHHH-HHHHHHHHhCCCCCcEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 97645444 4788888877 4 8999999999999 99999999999999 999999998 999999999999999999
Q ss_pred HHHHHHH
Q psy9582 318 KNEILSI 324 (329)
Q Consensus 318 ~~~~~~~ 324 (329)
+++.+.+
T Consensus 316 ~~~~~~~ 322 (323)
T cd00704 316 IEEKEIA 322 (323)
T ss_pred HHHHHhh
Confidence 9998765
No 9
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=1.4e-66 Score=482.20 Aligned_cols=305 Identities=22% Similarity=0.354 Sum_probs=279.4
Q ss_pred CCCC-CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582 1 MLKK-PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT 79 (329)
Q Consensus 1 ~~~~-~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~ 79 (329)
||++ ++||+|||| |.||+++++.|+..++++ ||+|+|++ +++++|.++|++|+. ++..++.++.+.++
T Consensus 1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~-----el~L~D~~----~~~~~g~~~Dl~~~~-~~~~~~~i~~~~~~ 69 (315)
T PRK00066 1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIAD-----ELVIIDIN----KEKAEGDAMDLSHAV-PFTSPTKIYAGDYS 69 (315)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----CchhHHHHHHHHhhc-cccCCeEEEeCCHH
Confidence 6754 689999998 999999999999999987 99999999 788999999999987 44445677777899
Q ss_pred ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEe
Q psy9582 80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAM 158 (329)
Q Consensus 80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~ 158 (329)
+++|||+||+++|.|++||++|.+++..|+++++++++.+++++ |++++|++|||+|++++++++++ ++|++|+ +.+
T Consensus 70 ~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP~d~~~~~~~k~s-g~p~~~viG~g 147 (315)
T PRK00066 70 DCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNPVDILTYATWKLS-GFPKERVIGSG 147 (315)
T ss_pred HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCcHHHHHHHHHHHh-CCCHHHEeecC
Confidence 99999999999999999999999999999999999999999997 99999999999999999999998 8999996 456
Q ss_pred chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc----hhhhHHHHHhhhhHHH
Q psy9582 159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW----NKNVFLPAISRRGEEI 234 (329)
Q Consensus 159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~----~~~~l~~~v~~~~~~i 234 (329)
|.|||+|+++++|++++++|++|+++ ||||||++++|+||+++++|+|+.+++.+. .| ..+++.+++++++++|
T Consensus 148 t~LDs~R~~~~la~~l~v~~~~V~~~-viGeHG~s~v~~~S~~~v~g~~l~~~~~~~-~~~~~~~~~~i~~~v~~~g~~i 225 (315)
T PRK00066 148 TSLDSARFRYMLSEKLDVDPRSVHAY-IIGEHGDTEFPVWSHANVAGVPLEEYLEEN-EQYDEEDLDEIFENVRDAAYEI 225 (315)
T ss_pred chHHHHHHHHHHHHHhCCCcccEEEE-EEecCCCcceecceeceECCEEHHHHhhhc-cCcCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988 799999999999999999999999987553 23 2457999999999999
Q ss_pred HHhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHH
Q psy9582 235 ISIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINL 312 (329)
Q Consensus 235 ~~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~ 312 (329)
++.||+++|+++.+ +..+++++++|+ +++|+|++++|+|| ++|+|||+||++ ++|++++++ ++|+++|+++|++
T Consensus 226 i~~kg~t~~~~a~~--~~~i~~ail~~~~~v~~~sv~~~g~yg-~~~v~~S~Pv~ig~~Gv~~i~~-l~L~~~E~~~L~~ 301 (315)
T PRK00066 226 IEKKGATYYGIAMA--LARITKAILNNENAVLPVSAYLEGQYG-EEDVYIGVPAVVNRNGIREIVE-LPLNDDEKQKFAH 301 (315)
T ss_pred HhcCCeehHHHHHH--HHHHHHHHHcCCCeEEEEEEEeccccC-CCCEEEEeEEEEeCCcEEEEcC-CCCCHHHHHHHHH
Confidence 99999999977653 448999999998 99999999999999 589999999999 999999998 9999999999999
Q ss_pred HHHHHHHHHHHH
Q psy9582 313 SIEELKNEILSI 324 (329)
Q Consensus 313 s~~~i~~~~~~~ 324 (329)
|+++|++.++..
T Consensus 302 s~~~l~~~~~~~ 313 (315)
T PRK00066 302 SADVLKEIMDEA 313 (315)
T ss_pred HHHHHHHHHHHh
Confidence 999999998753
No 10
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=4.3e-66 Score=482.50 Aligned_cols=302 Identities=17% Similarity=0.300 Sum_probs=274.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a 84 (329)
+||+|||| |+||+++|+.|+..++++ ||+|+|++ +++++|.++|++|+. ++.....++. ..+++++||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~-----el~LiDi~----~~~~~g~a~DL~~~~-~~~~~~~i~~~~dy~~~~da 106 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLAD-----ELALVDVN----PDKLRGEMLDLQHAA-AFLPRTKILASTDYAVTAGS 106 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC----CchhhHHHHHHHhhh-hcCCCCEEEeCCCHHHhCCC
Confidence 69999998 999999999999999987 99999999 788999999999986 4433345543 358899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-echhHH
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLRLDH 163 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~lds 163 (329)
|+||+++|.|+++|++|.+++.+|++++++++++|+++| |++++|++|||+|++|+++++++ +||++||+| +|.||+
T Consensus 107 DiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~ivivvtNPvdv~t~~~~k~s-g~p~~rviG~gt~LDs 184 (350)
T PLN02602 107 DLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS-PDTILLIVSNPVDVLTYVAWKLS-GFPANRVIGSGTNLDS 184 (350)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHHh-CCCHHHEEeecchHHH
Confidence 999999999999999999999999999999999999997 99999999999999999999999 799999754 589999
Q ss_pred HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc-cc---hhhhHHHHHhhhhHHHHHhcC
Q psy9582 164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS-FW---NKNVFLPAISRRGEEIISIRG 239 (329)
Q Consensus 164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~-~~---~~~~l~~~v~~~~~~i~~~kg 239 (329)
+|+++++|+++|+++++|+++ ||||||++++|+||+++++|+|+.+++.... .+ ..+++.+++++++++|++.||
T Consensus 185 ~R~r~~lA~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~KG 263 (350)
T PLN02602 185 SRFRFLIADHLDVNAQDVQAY-IVGEHGDSSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIKLKG 263 (350)
T ss_pred HHHHHHHHHHhCCCccceeee-EEecCCCceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999988 8999999999999999999999998875420 11 256899999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCC-CCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582 240 ASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVP-KDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE 316 (329)
Q Consensus 240 ~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip-~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~ 316 (329)
+|+|+++++ +.+++++++.|+ +++|||++++|+||+| +|+|+|+||++ ++|++++++ ++|+++|+++|++|+++
T Consensus 264 ~t~~gia~a--~a~ii~ail~d~~~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~-l~L~~~E~~~l~~sa~~ 340 (350)
T PLN02602 264 YTSWAIGYS--VASLVRSLLRDQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVN-VHLTDEEAERLRKSAKT 340 (350)
T ss_pred ccHHHHHHH--HHHHHHHHHhcCCCeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEec-CCCCHHHHHHHHHHHHH
Confidence 999988764 348999999998 9999999999999994 89999999999 999999998 99999999999999999
Q ss_pred HHHHHHHH
Q psy9582 317 LKNEILSI 324 (329)
Q Consensus 317 i~~~~~~~ 324 (329)
|++.++.+
T Consensus 341 l~~~~~~~ 348 (350)
T PLN02602 341 LWEVQSQL 348 (350)
T ss_pred HHHHHHHh
Confidence 99887654
No 11
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.4e-66 Score=493.04 Aligned_cols=313 Identities=28% Similarity=0.452 Sum_probs=284.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
|+++.+|+|+||||.+|+++.+.++.+.++|+++|+.|+|+|+. +.+++++|.++||+|++++++.++.++++.++++
T Consensus 120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~--~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~ 197 (452)
T cd05295 120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSP--ENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAF 197 (452)
T ss_pred CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCC--CchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHh
Confidence 55679999999999999999999999999999999999999994 2278899999999999877776788888999999
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEec
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR--DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAML 159 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p--~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t 159 (329)
+|||+||+++|.||++|++|.+++..|++++++++++|++++ | ++++|+.|||+|++|+++++++|++|++||+|++
T Consensus 198 ~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a-~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~g 276 (452)
T cd05295 198 KDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA-KEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVA 276 (452)
T ss_pred CCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEec
Confidence 999999999999999999999999999999999999999998 7 8888999999999999999999999999998887
Q ss_pred hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecc------------eehhhhhccCccchhhhHHHHH
Q psy9582 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNG------------VLIRDMINNNSFWNKNVFLPAI 227 (329)
Q Consensus 160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~------------~p~~~~~~~~~~~~~~~l~~~v 227 (329)
.+|++|+++++|+++|++|++|+..+||||||+++||+||+++|+| +|+.+++.++ .|..+++.+.+
T Consensus 277 tlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~-~w~~~~~~~~v 355 (452)
T cd05295 277 RLQENRAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDS-KWINGEFVATL 355 (452)
T ss_pred chHHHHHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEEcccccccccccccCccHHHHhcch-hhhHHHHHHHH
Confidence 7889999999999999999999887799999999999999999987 9999988665 67788999999
Q ss_pred hhhhHHHHHhcCCccHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCC
Q psy9582 228 SRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEID 303 (329)
Q Consensus 228 ~~~~~~i~~~kg~~~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~ 303 (329)
++++. .+||.+.++++ ++++ +++++|++| + +|+|||++++|+||+|+|++||+||++ ++|++.+.+ ++|+
T Consensus 356 ~~rg~---~rkgsT~~siA-~A~~-~iv~ail~~t~~~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~-L~L~ 429 (452)
T cd05295 356 KSLSS---SLNHEAAISPA-HAIA-TTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTD-LELS 429 (452)
T ss_pred HHHHH---hccCChHHHHH-HHHH-HHHHHHHhCCCCCeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeC-CCCC
Confidence 99988 55665555444 4445 666666665 3 899999999999999999999999999 999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy9582 304 KFSRKKINLSIEELKNEILSI 324 (329)
Q Consensus 304 ~~E~~~l~~s~~~i~~~~~~~ 324 (329)
++|+++|++|+++|+++.+.+
T Consensus 430 e~E~~kL~~S~~eL~~E~~~~ 450 (452)
T cd05295 430 EILREVLKRITSDLIQEKLVA 450 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998765
No 12
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=3e-66 Score=476.33 Aligned_cols=293 Identities=24% Similarity=0.334 Sum_probs=269.6
Q ss_pred EEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEE
Q psy9582 10 ITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAIL 89 (329)
Q Consensus 10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~ 89 (329)
|||+ |+||+++|+.|+..++++ ||+|+|++ +++++|.++|++|+......+++++.+.|++++|||+||+
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~-----el~L~Di~----~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVi 70 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIAD-----EIVLIDIN----KDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVI 70 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----CChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEE
Confidence 6898 999999999999999987 99999999 7889999999999874444556777778999999999999
Q ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechhHHHHHHH
Q psy9582 90 IGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRLDHNRAIA 168 (329)
Q Consensus 90 ~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~~~ 168 (329)
++|.|++|||+|.+++.+|++++++++++|++++ |++++|++|||+|++|+++++++ ++|++|+ +.+|.|||+|+++
T Consensus 71 tag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~~~s-g~p~~~viG~gt~LDs~R~~~ 148 (299)
T TIGR01771 71 TAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSG-FDGIFLVATNPVDILTYVAWKLS-GFPKNRVIGSGTVLDTARLRY 148 (299)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHh-CCCHHHEEeccchHHHHHHHH
Confidence 9999999999999999999999999999999996 99999999999999999999999 9999996 5569999999999
Q ss_pred HHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC---ccchhhhHHHHHhhhhHHHHHhcCCccHHH
Q psy9582 169 KLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---SFWNKNVFLPAISRRGEEIISIRGASSAAS 245 (329)
Q Consensus 169 ~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~---~~~~~~~l~~~v~~~~~~i~~~kg~~~~~~ 245 (329)
++|++++++|++|+++ |||+||++++|+||+++++|+|+.+++.+. ..+..+++.+++++++++|++.||+++|++
T Consensus 149 ~la~~l~v~~~~V~~~-v~GeHG~s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~~~ 227 (299)
T TIGR01771 149 LLAEKLGVDPQSVHAY-IIGEHGDSEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYYGI 227 (299)
T ss_pred HHHHHhCcCcCeEEEE-EEecCCCceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeHHH
Confidence 9999999999999988 899999999999999999999999887431 023467899999999999999999999988
Q ss_pred HHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582 246 AASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN 319 (329)
Q Consensus 246 ~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~ 319 (329)
+++ +.+++++|+.|+ +++|||++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.||+
T Consensus 228 a~a--~~~~i~ail~d~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~ik~ 299 (299)
T TIGR01771 228 GMA--VARIVEAILHDENRVLPVSAYLDGEYGI-KDVYIGVPAVLGRNGVEEIIE-LPLSDEEKEAFQKSAETLKK 299 (299)
T ss_pred HHH--HHHHHHHHHcCCCcEEEEEEEecccCCC-CCEEEEEEEEEeCCeeEEEcc-CCCCHHHHHHHHHHHHHHhC
Confidence 763 458999999998 999999999999998 68999999999 999999998 99999999999999999874
No 13
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=8.2e-66 Score=475.71 Aligned_cols=300 Identities=19% Similarity=0.272 Sum_probs=272.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~ 82 (329)
.+||+|||| |+||+++|+.|+..++.+ ||+|+|++ +++++|.++|++|+. ++. ..++.++ .|++++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~-----el~LiD~~----~~~~~g~a~Dl~~~~-~~~~~~~v~~~~-dy~~~~ 70 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLAD-----ELVLVDVV----EDKLKGEAMDLQHGS-AFLKNPKIEADK-DYSVTA 70 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----ccHHHHHHHHHHHhh-ccCCCCEEEECC-CHHHhC
Confidence 479999998 999999999999999987 99999999 778999999999986 333 2444434 478999
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE-echh
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA-MLRL 161 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~l 161 (329)
|||+||+++|.++++|++|.+++.+|+++++++++.|++++ |++++|++|||+|++++++++++ ++|++|++| +|.|
T Consensus 71 ~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~k~s-g~p~~~viG~gt~L 148 (312)
T cd05293 71 NSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAILLVVSNPVDIMTYVAWKLS-GLPKHRVIGSGCNL 148 (312)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEccChHHHHHHHHHHHh-CCCHHHEEecCchH
Confidence 99999999999999999999999999999999999999997 99999999999999999999999 999999554 5999
Q ss_pred HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC----ccchhhhHHHHHhhhhHHHHHh
Q psy9582 162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN----SFWNKNVFLPAISRRGEEIISI 237 (329)
Q Consensus 162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~----~~~~~~~l~~~v~~~~~~i~~~ 237 (329)
|++|+++++|+++++++++|+++ |||+||++++|+||+++++|+|+.+++... .....+++.+++++++++|++.
T Consensus 149 d~~R~~~~la~~l~v~~~~v~~~-v~GeHG~s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~ 227 (312)
T cd05293 149 DSARFRYLIAERLGVAPSSVHGW-IIGEHGDSSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKL 227 (312)
T ss_pred HHHHHHHHHHHHhCCChhhEEEE-EeecCCCCccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988 799999999999999999999999886321 0113578999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582 238 RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIE 315 (329)
Q Consensus 238 kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 315 (329)
||+++|+++. ++.+++++|++|+ .++|++++++|+||+|+|++||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus 228 kg~t~~~~a~--a~~~ii~ail~d~~~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~-l~L~~~E~~~l~~s~~ 304 (312)
T cd05293 228 KGYTSWAIGL--SVADLVDAILRNTGRVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIK-QPLTEEEQEKLQKSAD 304 (312)
T ss_pred cCCchHHHHH--HHHHHHHHHHcCCCeEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEec-CCCCHHHHHHHHHHHH
Confidence 9999998874 3458999999998 999999999999999999999999999 999999998 9999999999999999
Q ss_pred HHHHHHH
Q psy9582 316 ELKNEIL 322 (329)
Q Consensus 316 ~i~~~~~ 322 (329)
.|++.++
T Consensus 305 ~i~~~~~ 311 (312)
T cd05293 305 TLWEVQK 311 (312)
T ss_pred HHHHHhh
Confidence 9998765
No 14
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=8e-66 Score=478.65 Aligned_cols=315 Identities=46% Similarity=0.767 Sum_probs=282.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
++.||+||||+|++|+++++.|+..++++.++..+|+|+|+++ ..+++.+.++|+.|...++..+++++.+.+++++|
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~--~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~ 78 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP--ALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKD 78 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC--ccccccceeeehhhccccccCCceecCCHHHHhCC
Confidence 4789999999999999999999999887533334899999972 24567888999999875555567777777899999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDH 163 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds 163 (329)
||+||++||.+++++++|.+++..|+++++++++.|+++++|++++|++|||+|+||++++++++++|+++|+++|.||+
T Consensus 79 aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs 158 (325)
T cd01336 79 VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDH 158 (325)
T ss_pred CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHH
Confidence 99999999999999999999999999999999999999976899999999999999999999977898888999999999
Q ss_pred HHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeec----ceehhhhhccCccchhhhHHHHHhhhhHHHHHh-c
Q psy9582 164 NRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVN----GVLIRDMINNNSFWNKNVFLPAISRRGEEIISI-R 238 (329)
Q Consensus 164 ~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~----~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~-k 238 (329)
+|+++++|++++++|++|++++||||||++++|+||+++++ |+|+.+++.++ .|..+++.+++++++++|++. +
T Consensus 159 ~R~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v~~~~~g~~~~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~~~ 237 (325)
T cd01336 159 NRAKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVELNGKGKPAREAVKDD-AWLNGEFISTVQKRGAAVIKARK 237 (325)
T ss_pred HHHHHHHHHHhCcChhhceEeEEEEcCCCCeeeccccceeecCCCCccHHHHhccc-chhHHHHHHHHHhhHHHHHHccc
Confidence 99999999999999999988889999999999999999999 99999988664 566889999999999999996 5
Q ss_pred CCccHHHHHHHHHHHHHHHHhCC--C-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHH
Q psy9582 239 GASSAASAASAAIDHIKDWIFGT--E-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSI 314 (329)
Q Consensus 239 g~~~~~~~a~~~~~~l~~~i~~~--~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~ 314 (329)
|++.|+++. ++..+++++++| + +++|||++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|+
T Consensus 238 g~t~~~~a~--~~~~i~~ail~~~~~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~ 314 (325)
T cd01336 238 LSSAMSAAK--AICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQG-LSIDDFSREKIDATA 314 (325)
T ss_pred cchHHHHHH--HHHHHHHHHHcCCCCCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHH
Confidence 566666654 344788888876 5 999999999999999999999999999 999999998 999999999999999
Q ss_pred HHHHHHHHHH
Q psy9582 315 EELKNEILSI 324 (329)
Q Consensus 315 ~~i~~~~~~~ 324 (329)
+.|+++++.+
T Consensus 315 ~~l~~e~~~~ 324 (325)
T cd01336 315 KELVEEKETA 324 (325)
T ss_pred HHHHHHHHhh
Confidence 9999999765
No 15
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=2.1e-65 Score=474.98 Aligned_cols=312 Identities=46% Similarity=0.749 Sum_probs=274.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI 86 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi 86 (329)
||+||||+|+||+++++.|+..++++.+++.+|+|+|+++ ..++++++++|+.|...++...+..+++.+++++|||+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~--~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDi 78 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPP--AMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDV 78 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCC--cccccceeEeehhcccchhcCceeccCChHHHhCCCCE
Confidence 6999999999999999999999998644445799999972 24468999999999875554455555577999999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHHHHH
Q psy9582 87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRA 166 (329)
Q Consensus 87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~ 166 (329)
||+++|.|++++++|.+++..|++++++++++|+++++|++++|++|||+|+||++++++++++|++.|+++|.|||+||
T Consensus 79 VVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~ 158 (324)
T TIGR01758 79 AILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRA 158 (324)
T ss_pred EEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHH
Confidence 99999999999999999999999999999999999955999999999999999999999995555555788999999999
Q ss_pred HHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeec-c---eehhhhhccCccchhhhHHHHHhhhhHHHHHhcC-Cc
Q psy9582 167 IAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVN-G---VLIRDMINNNSFWNKNVFLPAISRRGEEIISIRG-AS 241 (329)
Q Consensus 167 ~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~-~---~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg-~~ 241 (329)
++++|++++++|++|+..+||||||++++|+||+++++ | +|+.+++.+. .|+++++.+++++++++|++.|| ++
T Consensus 159 r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~~g~~~~pl~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~k~~~t 237 (324)
T TIGR01758 159 LAQVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATVTKGGKQKPVREAIKDD-AYLDGEFITTVQQRGAAIIRARKLSS 237 (324)
T ss_pred HHHHHHHhCCChhhceEeEEEECCCCCcccccccceecCCCCccCHHHHhcch-hhHHHHHHHHHHhCHHHHHhccCCCH
Confidence 99999999999999987669999999999999999999 9 9999987654 46678999999999999999776 55
Q ss_pred cHHHHHHHHHHHHHHHHh--CCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582 242 SAASAASAAIDHIKDWIF--GTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE 316 (329)
Q Consensus 242 ~~~~~a~~~~~~l~~~i~--~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~ 316 (329)
.|+++. ++..++++|+ .|+ +++|||++++|+ ||+|+|+|||+||++ ++|++.+.+ ++|+++|+++|++|++.
T Consensus 238 ~~~ia~--~~~~i~~ai~~~~~~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~e-l~L~~~E~~~l~~s~~~ 314 (324)
T TIGR01758 238 ALSAAK--AAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEG-LCVDDSSRKKLALTAKE 314 (324)
T ss_pred HHHHHH--HHHHHHHHHhcCCCCCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecC-CCCCHHHHHHHHHHHHH
Confidence 555554 3458888888 677 999999999999 999999999999999 777776666 99999999999999999
Q ss_pred HHHHHHHH
Q psy9582 317 LKNEILSI 324 (329)
Q Consensus 317 i~~~~~~~ 324 (329)
|++.++.+
T Consensus 315 lk~~~~~~ 322 (324)
T TIGR01758 315 LEEERDEA 322 (324)
T ss_pred HHHHHHHh
Confidence 99999775
No 16
>KOG1495|consensus
Probab=100.00 E-value=3.1e-65 Score=442.56 Aligned_cols=299 Identities=21% Similarity=0.310 Sum_probs=276.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~ 82 (329)
..||.|+|+ |.+|.++|..++.+++.+ |++|+|.+ +++++|+.|||+|.+ ++. .++....| |.+.+
T Consensus 20 ~~KItVVG~-G~VGmAca~siL~k~Lad-----el~lvDv~----~dklkGE~MDLqH~s-~f~~~~~V~~~~D-y~~sa 87 (332)
T KOG1495|consen 20 HNKITVVGV-GQVGMACAISILLKGLAD-----ELVLVDVN----EDKLKGEMMDLQHGS-AFLSTPNVVASKD-YSVSA 87 (332)
T ss_pred CceEEEEcc-chHHHHHHHHHHHhhhhh-----ceEEEecC----cchhhhhhhhhcccc-ccccCCceEecCc-ccccC
Confidence 479999999 999999999999999987 99999999 889999999999986 555 45555555 88999
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEechh
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLRL 161 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~l 161 (329)
++++||+|||.-+++|++|.+++++|+.+++.+.+++.+|. ||++++++|||+|+|||+.||.+ +||++| |+.||+|
T Consensus 88 ~S~lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~yS-pd~~llvvSNPVDilTYv~wKLS-gfP~nRViGsGcnL 165 (332)
T KOG1495|consen 88 NSKLVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYS-PDCILLVVSNPVDILTYVTWKLS-GFPKNRVIGSGCNL 165 (332)
T ss_pred CCcEEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCchHHHHHHHHHHc-CCcccceeccCcCc
Confidence 99999999999889999999999999999999999999995 99999999999999999999999 999999 6778999
Q ss_pred HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC-----c-cchhhhHHHHHhhhhHHHH
Q psy9582 162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN-----S-FWNKNVFLPAISRRGEEII 235 (329)
Q Consensus 162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~-----~-~~~~~~l~~~v~~~~~~i~ 235 (329)
||+||++.++++||++|++++++ |+||||++.+|.||.+.+.|.|+.++.++- | .| +++.+++.+.+|||+
T Consensus 166 DsaRFryLi~~~Lg~~pss~hgw-IiGEHGdSsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w--~eihK~v~~sayevi 242 (332)
T KOG1495|consen 166 DSARFRYLIGNRLGVHPSSCHGW-IIGEHGDSSVPVWSGVNIAGVSLKDLNPDLGTDYDPENW--KEIHKQVVDSAYEVI 242 (332)
T ss_pred cHHHHHHHHHHHhCCCcccceEE-EeeccCCccceecccccccceEHhHhChhhcCCCCHHHH--HHHHHHHHHHHHHHH
Confidence 99999999999999999999999 789999999999999999999999887552 1 35 588888999999999
Q ss_pred HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582 236 SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS 313 (329)
Q Consensus 236 ~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s 313 (329)
+.||+|+|+++.+ +.+|.++|++|. .++|+|+...|.||+.+|+|+|+||++ ++|+..++. .+|+++|.++|++|
T Consensus 243 klKGyTswaIgls--va~l~~ail~n~~~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~-~~Lt~~E~akL~kS 319 (332)
T KOG1495|consen 243 KLKGYTSWAIGLS--VADLAQAILRNLRRIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVK-QKLTDEEVAKLKKS 319 (332)
T ss_pred HhcCchHHHHHHH--HHHHHHHHHhCcCceeeeeeccccccCCCCceEEecceeecCCchhhhhc-ccCCHHHHHHHHHH
Confidence 9999999999874 559999999998 999999999999999889999999999 999999998 99999999999999
Q ss_pred HHHHHHHHHH
Q psy9582 314 IEELKNEILS 323 (329)
Q Consensus 314 ~~~i~~~~~~ 323 (329)
++.|.+.+..
T Consensus 320 a~tl~~~q~~ 329 (332)
T KOG1495|consen 320 AKTLLEAQKS 329 (332)
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 17
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=5.8e-64 Score=464.64 Aligned_cols=299 Identities=25% Similarity=0.379 Sum_probs=271.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|+++++.|+..++.. +|+|+|++ ++++++.++|++|..........+..+.++++++||
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~-----ei~l~D~~----~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aD 70 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIAD-----ELVLIDIN----EEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDAD 70 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----cchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCC
Confidence 48999998 999999999999999866 99999999 778899999999876333334455556688999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechhHHH
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRLDHN 164 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~ 164 (329)
+||+++|.|+++|++|.+++.+|++++++++++|++++ |++++|++|||+|++|+++++++ ++|++|| +.+|.||++
T Consensus 71 IVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~-~~~~vivvsNP~d~~~~~~~~~~-g~p~~~v~g~gt~LDs~ 148 (306)
T cd05291 71 IVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG-FDGIFLVASNPVDVITYVVQKLS-GLPKNRVIGTGTSLDTA 148 (306)
T ss_pred EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecChHHHHHHHHHHHh-CcCHHHEeeccchHHHH
Confidence 99999999999999999999999999999999999997 99999999999999999999997 9999995 556999999
Q ss_pred HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccch---hhhHHHHHhhhhHHHHHhcCCc
Q psy9582 165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN---KNVFLPAISRRGEEIISIRGAS 241 (329)
Q Consensus 165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~---~~~l~~~v~~~~~~i~~~kg~~ 241 (329)
|+++++|+++++++++|+++ |||+||++++|+||+++++|.|+.+++.+. .|. .+++.+++++++++|++.||++
T Consensus 149 R~~~~la~~l~v~~~~v~~~-V~G~Hg~s~~~~~S~~~v~g~~~~~~~~~~-~~~~~~~~~~~~~v~~~g~~ii~~kg~t 226 (306)
T cd05291 149 RLRRALAEKLNVDPRSVHAY-VLGEHGDSQFVAWSTVTVGGKPLLDLLKEG-KLSELDLDEIEEDVRKAGYEIINGKGAT 226 (306)
T ss_pred HHHHHHHHHHCCCcccceEE-EEecCCCceeecceeeEEcCEEHHHHhhcc-ccChHHHHHHHHHHHHHHHHHHHccCcc
Confidence 99999999999999999987 899999999999999999999999987643 342 6789999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582 242 SAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN 319 (329)
Q Consensus 242 ~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~ 319 (329)
+|+++++ +.+++++|++|+ +++|+|++++|+||. +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|++
T Consensus 227 ~~~~a~a--~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~l~~ 302 (306)
T cd05291 227 YYGIATA--LARIVKAILNDENAILPVSAYLDGEYGE-KDVYIGVPAIIGRNGVEEVIE-LDLTEEEQEKFEKSADIIKE 302 (306)
T ss_pred HHHHHHH--HHHHHHHHHcCCCEEEEEEEEeccccCC-CCEEEEEEEEEeCCCEEEEEC-CCCCHHHHHHHHHHHHHHHH
Confidence 9988763 448999999998 999999999999995 89999999999 999999998 99999999999999999998
Q ss_pred HHH
Q psy9582 320 EIL 322 (329)
Q Consensus 320 ~~~ 322 (329)
.++
T Consensus 303 ~~~ 305 (306)
T cd05291 303 NIK 305 (306)
T ss_pred Hhh
Confidence 865
No 18
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=3e-64 Score=462.69 Aligned_cols=297 Identities=40% Similarity=0.646 Sum_probs=265.9
Q ss_pred HHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHH
Q psy9582 25 IANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSEL 104 (329)
Q Consensus 25 l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~ 104 (329)
|+.+.+++.++++.++|+|++ +++++++|+++|+.|+..++...++++++.|++++|||+||+++|.|+++|++|.++
T Consensus 2 ~~~g~~~g~~~~~~l~L~D~~--~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dl 79 (309)
T PLN00135 2 IARGVMLGPDQPVILHMLDIP--PAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDV 79 (309)
T ss_pred cccccccCCCCeEEEEEecCc--ccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHH
Confidence 456778887888999999999 223899999999999875554566666676999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeE
Q psy9582 105 LAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN-FTAMLRLDHNRAIAKLASKLNEPVSSIKK 183 (329)
Q Consensus 105 ~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~~~~la~~l~~~~~~v~~ 183 (329)
+..|++++++++++|+++++|++++|++|||+|+||+++++.+ ++|++| |+++|.|||+||++++|++++++|++|+.
T Consensus 80 l~~N~~I~~~i~~~i~~~~~p~aivivvsNPvDv~t~~~~~~s-g~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~ 158 (309)
T PLN00135 80 MSKNVSIYKSQASALEKHAAPDCKVLVVANPANTNALILKEFA-PSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKN 158 (309)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEeCCcHHHHHHHHHHHc-CCCCccEEEeeehHHHHHHHHHHHHHhCcChhhcee
Confidence 9999999999999999963499999999999999999999999 888877 78889999999999999999999999954
Q ss_pred EEEEecCCCceeecccCCee----cceehhhhhccCccchhhhHHHHHhhhhHHHHHh-cCCccHHHHHHHHHHHHHHHH
Q psy9582 184 VFVWGNHSLSMYPDYRYATV----NGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI-RGASSAASAASAAIDHIKDWI 258 (329)
Q Consensus 184 ~~v~G~hg~~~~p~~s~~~v----~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~-kg~~~~~~~a~~~~~~l~~~i 258 (329)
.+||||||+++||+||++++ +|+|+.+++.++ +|+++++.+++++++++|++. ||+++|+++++ +.+++++|
T Consensus 159 ~~VlGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~-~~~~~~i~~~v~~~g~~Ii~~~kg~t~~~ia~a--~~~iv~ai 235 (309)
T PLN00135 159 VIIWGNHSSTQYPDVNHATVKTPSGEKPVRELVADD-AWLNGEFITTVQQRGAAIIKARKLSSALSAASS--ACDHIRDW 235 (309)
T ss_pred eEEEEcCCCceeeccccceEecCCCCcCHHHHhCch-hhHHHHHHHHHHHHHHHHHHccCccHHHHHHHH--HHHHHHHH
Confidence 44899999999999999999 999999987554 466889999999999999997 67778877653 44788887
Q ss_pred hC--CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 259 FG--TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328 (329)
Q Consensus 259 ~~--~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~ 328 (329)
.+ |+ +++|+|++++|+||+|+|+|||+||++ ++|++.+++ ++|+++|+++|++|++.|+++++.+.+.|
T Consensus 236 ~~~~~~~~v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~-l~L~~~E~~~l~~S~~~lk~~~~~~~~~~ 308 (309)
T PLN00135 236 VLGTPEGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQG-LSIDEFSRKKMDATAKELKEEKELAYSCL 308 (309)
T ss_pred HhCCcCCeEEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 76 77 999999999999999899999999999 899999988 99999999999999999999999998876
No 19
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=9.8e-64 Score=460.47 Aligned_cols=299 Identities=36% Similarity=0.588 Sum_probs=265.3
Q ss_pred HHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHH
Q psy9582 23 FRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERS 102 (329)
Q Consensus 23 ~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~ 102 (329)
+.|+.+.+|+ ++|+.++|+|++ +.+++++|.++|+.|+..+.......+++.+++++|||+||+++|.|+++|++|.
T Consensus 3 ~~~~~g~~~g-~~~~~l~L~D~~--~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~ 79 (313)
T TIGR01756 3 HWIANGDLYG-NRPVCLHLLEIP--PALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRA 79 (313)
T ss_pred ceeccCcccC-CCeEEEEEecCC--CccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHH
Confidence 4567888999 889999999998 2248999999999998743333334456655899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHH-HHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCe
Q psy9582 103 ELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM-KSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSI 181 (329)
Q Consensus 103 ~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~-~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v 181 (329)
+++..|++++++++++|+++++|++++|++|||+|+||++++ +.+ ++|++.|+++|.|||+||++++|++++++|++|
T Consensus 80 dll~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~~s-g~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V 158 (313)
T TIGR01756 80 DLLTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLHAP-KLSAENFSSLCMLDHNRAVSRIASKLKVPVDHI 158 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHHcC-CCCHHHEEecccHHHHHHHHHHHHHhCcChhhe
Confidence 999999999999999999998566899999999999999995 666 999887888999999999999999999999999
Q ss_pred eEEEEEecCCCceeecccCCee--cceehhhh--hccCccchhhhHHHHHhhhhHHHHHhcCCccHHHHHHHHHHHHHHH
Q psy9582 182 KKVFVWGNHSLSMYPDYRYATV--NGVLIRDM--INNNSFWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDW 257 (329)
Q Consensus 182 ~~~~v~G~hg~~~~p~~s~~~v--~~~p~~~~--~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~~~~a~~~~~~l~~~ 257 (329)
++++||||||++++|+||++++ +|.|+..+ +. + .|.++++.+++++++++|++.||+|+|++++++++ .++++
T Consensus 159 ~~~~V~GeHG~s~vp~~S~~~V~~~G~~~~~~~~~~-~-~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~-~iv~a 235 (313)
T TIGR01756 159 YHVVVWGNHAESMVADLTHAEFTKNGKHQKVFDELC-R-DYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASL-QHMKA 235 (313)
T ss_pred eeeEEEECCCCceeecccccEEecCCeehhHhhhcC-c-HhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHH-HHHHH
Confidence 8887999999999999999999 99997644 32 2 35678999999999999999999999988865544 78888
Q ss_pred HhC--CC-cEEEEEeecC--CCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 258 IFG--TE-NWVTMGIPSD--GSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328 (329)
Q Consensus 258 i~~--~~-~i~~~~v~~~--g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~ 328 (329)
|++ |+ +++|||++++ |+||+|+|+++|+||++ ++|+++++++++|+++|+++|++|+++|+++.+.+.++|
T Consensus 236 il~~~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l~L~~~E~~~l~~Sa~~l~~e~~~~~~~~ 312 (313)
T TIGR01756 236 WLFGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEKDLFEERETALKAL 312 (313)
T ss_pred HhcCCCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888 66 9999999985 39999889999999999 999999998899999999999999999999999998876
No 20
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=2.9e-63 Score=458.09 Aligned_cols=295 Identities=24% Similarity=0.361 Sum_probs=270.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccCCccE
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFKDANI 86 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~~aDi 86 (329)
|+|||+ |.||+++++.|+..++++ ||+|+|++ ++++++.++||.|...... ..+..+++ ++++++||+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~-----el~l~D~~----~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDi 69 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLAS-----ELVLVDVN----EEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADI 69 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCC----ccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCE
Confidence 689998 999999999999999987 99999999 7889999999999874422 23333344 889999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHHHH
Q psy9582 87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDHNR 165 (329)
Q Consensus 87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~r 165 (329)
||+++|.|+++|++|.+++.+|++++++++++|+++| |++++|++|||+|++++++++++ ++|++|++|. |.+||+|
T Consensus 70 VIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~d~~~~~~~~~s-g~~~~kviG~gt~lDs~r 147 (300)
T cd00300 70 VVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYG-PDAIILVVSNPVDILTYVAQKLS-GLPKNRVIGSGTLLDSAR 147 (300)
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChHHHHHHHHHHHh-CcCHHHEEecCCcHHHHH
Confidence 9999999999999999999999999999999999998 99999999999999999999999 8999997665 8999999
Q ss_pred HHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccHHH
Q psy9582 166 AIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAAS 245 (329)
Q Consensus 166 ~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~~~ 245 (329)
+++++|+++++++++|+++ |+|+||++++|+||+++++|.|+.+++++. +|..+++.+++++++++|++.||+++|++
T Consensus 148 ~~~~la~~l~v~~~~v~~~-viGeHg~s~v~~~S~~~v~g~p~~~~~~~~-~~~~~~l~~~v~~~~~~ii~~kg~t~~~~ 225 (300)
T cd00300 148 FRSLLAEKLDVDPQSVHAY-VLGEHGDSQVVAWSTATVGGLPLEELAPFT-KLDLEAIEEEVRTSGYEIIRLKGATNYGI 225 (300)
T ss_pred HHHHHHHHhCCCcccEEEE-EEeccCCceeeeeeeeEECCEEHHHhhccc-HHHHHHHHHHHHHHHHHHHHccCcchHHH
Confidence 9999999999999999988 789999999999999999999999988664 57789999999999999999999999977
Q ss_pred HHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy9582 246 AASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321 (329)
Q Consensus 246 ~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~ 321 (329)
+.+ +.++++++++|+ +++|+|++++|+||. +|+|||+||++ ++|++++++ ++|+++|+++|++|+++|++.+
T Consensus 226 a~a--~~~~~~ai~~~~~~v~~~s~~~~g~yg~-~~~~~s~Pv~ig~~Gi~~i~~-l~L~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd00300 226 ATA--IADIVKSILLDERRVLPVSAVQEGQYGI-EDVALSVPAVVGREGVVRILE-IPLTEDEEAKLQKSAEALKEVL 299 (300)
T ss_pred HHH--HHHHHHHHHcCCCeEEEEEEEecCccCC-CCEEEEEEEEEeCCCeEEEec-CCCCHHHHHHHHHHHHHHHHHh
Confidence 643 448999999998 999999999999994 89999999999 999999998 9999999999999999999875
No 21
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=7.6e-62 Score=451.82 Aligned_cols=305 Identities=26% Similarity=0.390 Sum_probs=271.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCccccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAF 81 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al 81 (329)
+.+||+|||| |++|+++++.++..++ . +|+|+|++ ++++++.++|+.|...... .+++.+++ ++++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~-----~l~L~Di~----~~~~~g~~lDl~~~~~~~~~~~~i~~~~d-~~~l 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-G-----DVVLYDVI----KGVPQGKALDLKHFSTLVGSNINILGTNN-YEDI 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-C-----eEEEEECC----CccchhHHHHHhhhccccCCCeEEEeCCC-HHHh
Confidence 5679999998 9999999999999886 4 89999999 6778899999998753222 24444444 6799
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-ch
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LR 160 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ 160 (329)
+|||+||+++|.+++++++|.+++..|.++++++++.|+++| |++|+|++|||+|++++++++++ ++|++|++|. |.
T Consensus 72 ~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvsNP~di~t~~~~~~s-~~p~~rviG~gt~ 149 (319)
T PTZ00117 72 KDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVTNPLDCMVKVFQEKS-GIPSNKICGMAGV 149 (319)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHhh-CCCcccEEEecch
Confidence 999999999999999999999999999999999999999998 99999999999999999999998 9999997665 59
Q ss_pred hHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccch---hhhHHHHHhhhhHHHHHh
Q psy9582 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN---KNVFLPAISRRGEEIISI 237 (329)
Q Consensus 161 lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~---~~~l~~~v~~~~~~i~~~ 237 (329)
+|++|+++++|++++++|++|+++ |+||||++++|+||+++++|+|+.+++++. .|. .+++.+++++++++|++.
T Consensus 150 lds~R~~~~la~~l~v~~~~v~~~-viGeHg~~~v~~~s~~~v~g~p~~~~~~~~-~~~~~~~~~i~~~v~~~g~~ii~~ 227 (319)
T PTZ00117 150 LDSSRFRCNLAEKLGVSPGDVSAV-VIGGHGDLMVPLPRYCTVNGIPLSDFVKKG-AITEKEINEIIKKTRNMGGEIVKL 227 (319)
T ss_pred HHHHHHHHHHHHHhCCCcccceEE-EeecCCCcEEeceeeceECCEEHHHHhhcc-ccCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999988 689999999999999999999999987543 332 567889999999999996
Q ss_pred --cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582 238 --RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS 313 (329)
Q Consensus 238 --kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s 313 (329)
||++.|+++. ++.+++++|++|+ +++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|
T Consensus 228 ~~kg~t~~~~a~--a~~~~~~ail~~~~~v~~~s~~~~g~yg~~-~~~~s~P~~ig~~Gv~~i~~-l~l~~~E~~~l~~s 303 (319)
T PTZ00117 228 LKKGSAFFAPAA--AIVAMIEAYLKDEKRVLVCSVYLNGQYNCK-NLFVGVPVVIGGKGIEKVIE-LELNAEEKELFDKS 303 (319)
T ss_pred cCCCChHHHHHH--HHHHHHHHHhcCCCeEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHH
Confidence 6666666654 3458999999998 9999999999999994 9999999999 999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q psy9582 314 IEELKNEILSISHLI 328 (329)
Q Consensus 314 ~~~i~~~~~~~~~~~ 328 (329)
++.|++.++.+..++
T Consensus 304 ~~~l~~~~~~~~~~~ 318 (319)
T PTZ00117 304 IESIQELTQKAKALI 318 (319)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988765
No 22
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.2e-61 Score=446.10 Aligned_cols=300 Identities=22% Similarity=0.313 Sum_probs=271.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||+|||+ |.+|++++..|+..++.. +|+|+|++ ++++++.++|+.|.. ++.....++++.++++++||
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~-----ev~l~D~~----~~~~~g~a~dl~~~~-~~~~~~~i~~~d~~~l~~aD 69 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLAS-----EIVLVDIN----KAKAEGEAMDLAHGT-PFVKPVRIYAGDYADCKGAD 69 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCC-----EEEEEECC----chhhhhHHHHHHccc-cccCCeEEeeCCHHHhCCCC
Confidence 48999999 999999999999998766 99999999 777888999999875 33333445556689999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEechhHHH
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLRLDHN 164 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~ 164 (329)
+||++++.+++++++|.+++..|+++++++++.+++++ |+++++++|||+|++++++++++ ++|++|+ +.+|.|||+
T Consensus 70 iViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~tNP~d~~~~~~~~~s-g~p~~~viG~gt~LDs~ 147 (308)
T cd05292 70 VVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPVDVLTYVAYKLS-GLPPNRVIGSGTVLDTA 147 (308)
T ss_pred EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHH-CcCHHHeecccchhhHH
Confidence 99999999999999999999999999999999999997 99999999999999999999999 9999995 556999999
Q ss_pred HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCc----cchhhhHHHHHhhhhHHHHHhcCC
Q psy9582 165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNS----FWNKNVFLPAISRRGEEIISIRGA 240 (329)
Q Consensus 165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~----~~~~~~l~~~v~~~~~~i~~~kg~ 240 (329)
|+++++|+++++++++|+++ |||+||++++|+||+++++|+|+.+++...+ .+..+++.+++++++++|++.||+
T Consensus 148 R~~~~la~~~~v~~~~v~~~-viGeHg~~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~kg~ 226 (308)
T cd05292 148 RFRYLLGEHLGVDPRSVHAY-IIGEHGDSEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERKGA 226 (308)
T ss_pred HHHHHHHHHhCCCccceece-eeccCCCcEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999988 8999999999999999999999998875410 124678999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582 241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK 318 (329)
Q Consensus 241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~ 318 (329)
++|+++++ +.+++++|+.|+ +++|+|++++|+||+ +|+|||+||+| ++|++++++ ++||++|+++|++|++.|+
T Consensus 227 t~~~~a~a--~~~i~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~~i~ 302 (308)
T cd05292 227 TYYAIGLA--LARIVEAILRDENSVLTVSSLLDGQYGI-KDVALSLPCIVGRSGVERVLP-PPLSEEEEEALRASAEVLK 302 (308)
T ss_pred cHHHHHHH--HHHHHHHHHcCCCcEEEEEEEEcccCCC-CCEEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHHHHH
Confidence 99988753 458999999998 999999999999998 79999999999 999999999 9999999999999999999
Q ss_pred HHHHH
Q psy9582 319 NEILS 323 (329)
Q Consensus 319 ~~~~~ 323 (329)
+.++.
T Consensus 303 ~~~~~ 307 (308)
T cd05292 303 EAIES 307 (308)
T ss_pred HHHhh
Confidence 88763
No 23
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=3.6e-61 Score=444.37 Aligned_cols=296 Identities=25% Similarity=0.379 Sum_probs=266.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCcccccCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPITAFKD 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~al~~ 83 (329)
+||+|||+ |.||+.+|..++..++. +|+|+|++ ++...+.++|+.+..... ..+++.+++ ++++++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~------~VvlvDi~----~~l~~g~a~d~~~~~~~~~~~~~i~~t~d-~~~~~~ 69 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA------DLVLLDVV----EGIPQGKALDMYEASPVGGFDTKVTGTNN-YADTAN 69 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC------eEEEEeCC----CChhHHHHHhhhhhhhccCCCcEEEecCC-HHHhCC
Confidence 68999998 99999999999998864 79999998 666777888888754211 235666565 567999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD 162 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld 162 (329)
||+||+++|.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|++|+++++++ |+|++|++|. |.||
T Consensus 70 aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~di~t~~~~~~s-g~~~~rviG~g~~ld 147 (305)
T TIGR01763 70 SDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPLDAMTYVAWQKS-GFPKERVIGQAGVLD 147 (305)
T ss_pred CCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHH-CcCHHHEEEeccchH
Confidence 9999999999999999999999999999999999999997 99999999999999999999999 9999997665 6999
Q ss_pred HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh--cCC
Q psy9582 163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI--RGA 240 (329)
Q Consensus 163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~--kg~ 240 (329)
|+|+++.+|++|+++|++|+++ ||||||++++|+||+++++|+|+.+++.++ ..+++.+++++++++|++. ||+
T Consensus 148 s~R~~~~la~~l~v~~~~v~~~-v~GeHg~s~~~~wS~~~i~g~~~~~~~~~~---~~~~l~~~v~~~g~~ii~~~~kg~ 223 (305)
T TIGR01763 148 SARFRTFIAMELGVSVQDVTAC-VLGGHGDAMVPLVRYSTVAGIPVADLISAE---RIAEIVERTRKGGGEIVNLLKQGS 223 (305)
T ss_pred HHHHHHHHHHHhCcCHHHeeee-EEecCCCcEEeeeeeeEECCEEHHHhcCHH---HHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999988 899999999999999999999999887554 3578999999999999997 567
Q ss_pred ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582 241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK 318 (329)
Q Consensus 241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~ 318 (329)
+.|++++ ++.+++++|++|+ .++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|+
T Consensus 224 t~~~~a~--~~~~i~~ai~~~~~~v~~~s~~~~~~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~i~ 299 (305)
T TIGR01763 224 AYYAPAA--SVVEMVEAILKDRKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIYE-LKLDQSELALLNKSAKIVD 299 (305)
T ss_pred hHHHHHH--HHHHHHHHHhCCCCeEEEEEEEecccCCC-CceEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence 7776665 4569999999998 999999999999999 79999999999 999999999 9999999999999999999
Q ss_pred HHHHH
Q psy9582 319 NEILS 323 (329)
Q Consensus 319 ~~~~~ 323 (329)
+.+++
T Consensus 300 ~~~~~ 304 (305)
T TIGR01763 300 ENCKM 304 (305)
T ss_pred HHHhc
Confidence 98764
No 24
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=9.8e-61 Score=443.84 Aligned_cols=302 Identities=24% Similarity=0.338 Sum_probs=268.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPIT 79 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~ 79 (329)
|-+.+||+|||| |++|+++++.++..++. +|+|+|++ ++++.+.++|+.|..... ..+++.+++ ++
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~------~i~LvDi~----~~~~~~~~ld~~~~~~~~~~~~~I~~~~d-~~ 70 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLG------DVVLFDIV----KNIPQGKALDISHSNVIAGSNSKVIGTNN-YE 70 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCC------eEEEEeCC----CchhhHHHHHHHhhhhccCCCeEEEECCC-HH
Confidence 335589999998 99999999999988873 79999999 666788899999875222 234554455 68
Q ss_pred ccCCccEEEEeCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCc
Q psy9582 80 AFKDANIAILIGSFPRKSNM-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKN 154 (329)
Q Consensus 80 al~~aDiVi~~~g~~~~~g~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~ 154 (329)
+++|||+||+++|.++++++ +|.+++..|++++++++++|+++| |++|+|++|||+|++++.+++++ ++|++|
T Consensus 71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sNP~di~t~~~~~~s-g~p~~r 148 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITNPLDVMVKLLQEHS-GLPKNK 148 (321)
T ss_pred HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHhc-CCChhh
Confidence 99999999999999999999 999999999999999999999998 99999999999999999999998 999999
Q ss_pred EEEe-chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccc---hhhhHHHHHhhh
Q psy9582 155 FTAM-LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW---NKNVFLPAISRR 230 (329)
Q Consensus 155 i~~~-t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~---~~~~l~~~v~~~ 230 (329)
++|. |.+|++|+++.+|+++++++++|+++ |+|+||+++||+||+++++|.|+.+++++. .+ ..+++.++++++
T Consensus 149 viGlgt~lds~R~~~~la~~l~v~~~~v~~~-viGeHg~s~v~~~S~~~i~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 226 (321)
T PTZ00082 149 VCGMAGVLDSSRLRTYIAEKLGVNPRDVHAS-VIGAHGDKMVPLPRYVTVGGIPLSEFIKKG-LITQEEIDEIVERTRNT 226 (321)
T ss_pred EEEecCcccHHHHHHHHHHHhCCCcccceee-EEecCCCceEecceeeEECCEEHHHhhhcc-cCCHHHHHHHHHHHHHH
Confidence 7665 59999999999999999999999988 789999999999999999999999887432 11 257899999999
Q ss_pred hHHHHHh--cCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHH
Q psy9582 231 GEEIISI--RGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFS 306 (329)
Q Consensus 231 ~~~i~~~--kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E 306 (329)
+++|++. ||++.|+++. ++.+++++|+.|+ +++|||++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|
T Consensus 227 g~~i~~~~gkg~t~~~ia~--a~~~i~~ail~d~~~v~~vs~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E 302 (321)
T PTZ00082 227 GKEIVDLLGTGSAYFAPAA--AAIEMAEAYLKDKKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKIIE-LDLTPEE 302 (321)
T ss_pred HHHHHhhcCCCccHHHHHH--HHHHHHHHHHcCCCcEEEEEEEecccCCC-CCeEEEEEEEEeCCeEEEEeC-CCCCHHH
Confidence 9999996 5677776665 3458999999998 999999999999999 79999999999 999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy9582 307 RKKINLSIEELKNEILS 323 (329)
Q Consensus 307 ~~~l~~s~~~i~~~~~~ 323 (329)
+++|++|++.|++.++.
T Consensus 303 ~~~l~~sa~~i~~~~~~ 319 (321)
T PTZ00082 303 QKKFDESIKEVKRLEAL 319 (321)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988764
No 25
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=2.1e-61 Score=444.85 Aligned_cols=294 Identities=20% Similarity=0.281 Sum_probs=258.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-c--CcccccCC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-E--NPITAFKD 83 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~--~~~~al~~ 83 (329)
||+||||+|+||+++|+.|+.+++.+ ||+|+|++ + ++|.++||+|.. ...++..+ . +++++++|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~-----elvL~Di~----~--a~g~a~DL~~~~--~~~~i~~~~~~~~~~~~~~d 67 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVS-----ELSLYDIA----G--AAGVAADLSHIP--TAASVKGFSGEEGLENALKG 67 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEecCC----C--CcEEEchhhcCC--cCceEEEecCCCchHHHcCC
Confidence 79999999999999999999998877 99999998 4 679999999965 22245442 2 34899999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh----HHHHHHHHCCCCCCCcEEEec
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT----NTYITMKSAPDLSYKNFTAML 159 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~----~~~~~~~~~~~~~~~~i~~~t 159 (329)
||+||+++|.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|+ +|+++++.+ ++|++||+|.+
T Consensus 68 aDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~iiivvsNPvDv~~~i~t~~~~~~s-g~p~~rViG~g 145 (312)
T TIGR01772 68 ADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMILVITNPVNSTVPIAAEVLKKKG-VYDPNKLFGVT 145 (312)
T ss_pred CCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEecCchhhHHHHHHHHHHHhc-CCChHHEEeee
Confidence 9999999999999999999999999999999999999997 99999999999998 888899988 99999988877
Q ss_pred hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCC-ceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh-
Q psy9582 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL-SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI- 237 (329)
Q Consensus 160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~-~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~- 237 (329)
.|||+||++++|++++++|++|+++ ||||||+ +++|+||++++. |. +.++ ..+++.+++++++++|++.
T Consensus 146 ~LDsaR~r~~la~~l~v~~~~v~~~-ViGeHg~~s~vp~~S~~~~~--~~---~~~~---~~~~i~~~v~~~g~~Ii~~k 216 (312)
T TIGR01772 146 TLDIVRANTFVAELKGKDPMEVNVP-VIGGHSGETIIPLISQCPGK--VL---FTED---QLEALIHRIQNAGTEVVKAK 216 (312)
T ss_pred cchHHHHHHHHHHHhCCCHHHeEEE-EEEecCCCcccccccccccc--CC---CCHH---HHHHHHHHHHHHHHHHHhCc
Confidence 8999999999999999999999988 8999986 999999999843 32 2222 3578999999999999997
Q ss_pred --cCCccHHHHHHHHHHHHHHHHh---CCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHHH
Q psy9582 238 --RGASSAASAASAAIDHIKDWIF---GTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRKK 309 (329)
Q Consensus 238 --kg~~~~~~~a~~~~~~l~~~i~---~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~~ 309 (329)
||+++|+++. ++.+++++|+ .|+ .++|++ +++|+||. +|+|||+||++ ++|++++++ + +|+++|+++
T Consensus 217 ~gkg~t~~~ia~--a~~~iv~ail~~~~d~~~v~~~s-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~ 291 (312)
T TIGR01772 217 AGAGSATLSMAF--AGARFVLSLVRGLKGEEGVVECA-YVESDGVT-EATFFATPLLLGKNGVEKRLG-IGKLSSFEEKM 291 (312)
T ss_pred cCCCChhHHHHH--HHHHHHHHHHHhhCCCccEEEEE-EEccCCCc-CceEEEEEEEEcCCeeEEEEc-cCCCCHHHHHH
Confidence 4666666654 3447888888 466 899965 88999997 89999999999 999999999 8 899999999
Q ss_pred HHHHHHHHHHHHHHHHhhhC
Q psy9582 310 INLSIEELKNEILSISHLIR 329 (329)
Q Consensus 310 l~~s~~~i~~~~~~~~~~~~ 329 (329)
|++|++.|++.++..++|.+
T Consensus 292 l~~S~~~i~~~~~~g~~~~~ 311 (312)
T TIGR01772 292 LNGALPELKKNIKKGEEFVA 311 (312)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998864
No 26
>KOG1496|consensus
Probab=100.00 E-value=2.5e-62 Score=417.85 Aligned_cols=324 Identities=50% Similarity=0.838 Sum_probs=312.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
|+++.+|.|.||+|.+|+++++.++.+-.+++|||+.++|+|+. +....++|.+|+|+|++.|++..+..+++..+++
T Consensus 1 ~~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~--~~~~~LegV~mELqD~a~PlL~~Vvattd~~~af 78 (332)
T KOG1496|consen 1 MKEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIP--PMMSVLEGVKMELQDCALPLLKGVVATTDEVEAF 78 (332)
T ss_pred CCCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCc--hHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhh
Confidence 78889999999999999999999999999999999999999998 5577899999999999999888899999999999
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechh
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRL 161 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l 161 (329)
+|.|+.|+.++.||++||+|.|++..|++++++-+..+++|++|+++|++++||++..+.++.+++|.+|.++|.++|.|
T Consensus 79 kdv~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRL 158 (332)
T KOG1496|consen 79 KDVDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRL 158 (332)
T ss_pred ccCcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecc----eehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582 162 DHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNG----VLIRDMINNNSFWNKNVFLPAISRRGEEIISI 237 (329)
Q Consensus 162 ds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~----~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~ 237 (329)
|.+|+..++|.++|++.++|+++++||||+.+|+|+..++++++ +|+.+.+.++ .|+..++.+.|++||..+++.
T Consensus 159 DhNRA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~-~wL~g~Fi~tVQkRGaavi~a 237 (332)
T KOG1496|consen 159 DHNRALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDD-AWLQGEFIETVQKRGAAVIKA 237 (332)
T ss_pred chhhHHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccc-hhhccchhhHHHhcchHhhhh
Confidence 99999999999999999999999999999999999999999986 8999999888 999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHHHHhCC-C-cEEEEEeecCCCCCCCCCeEEEEeEEEcCccEEeccCCCCCHHHHHHHHHHHH
Q psy9582 238 RGASSAASAASAAIDHIKDWIFGT-E-NWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIE 315 (329)
Q Consensus 238 kg~~~~~~~a~~~~~~l~~~i~~~-~-~i~~~~v~~~g~ygip~~~~~s~Pv~i~~Gv~~~~~~~~l~~~E~~~l~~s~~ 315 (329)
|+.+|++++|.++++++.+|+.+. + ++++++|+++|.||+|+|..||+||.+++|-|+++++++++++-++++..+++
T Consensus 238 rk~SSA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~k~g~wkiVqgl~iddf~r~km~~t~~ 317 (332)
T KOG1496|consen 238 RKLSSAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTIKNGDWKIVQGLPIDDFSREKMDLTAK 317 (332)
T ss_pred hhhhhhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEecCCceEEEcCcchhHHHHHhhhhhHH
Confidence 999999999999999999999998 4 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh
Q psy9582 316 ELKNEILSISHLI 328 (329)
Q Consensus 316 ~i~~~~~~~~~~~ 328 (329)
+|+++.+.+.++|
T Consensus 318 EL~eEkd~a~~~l 330 (332)
T KOG1496|consen 318 ELKEEKDLAYSCL 330 (332)
T ss_pred HHHHhHHHHHHhh
Confidence 9999999988776
No 27
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.3e-60 Score=438.81 Aligned_cols=292 Identities=22% Similarity=0.333 Sum_probs=255.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee---cCcccccC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH---ENPITAFK 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~---~~~~~al~ 82 (329)
+||+||||+|+||+++|+.|+.+++.+ ||+|+|++ +++|.++||+|+... ..++.. ++.|++++
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~-----elvLiDi~------~a~g~alDL~~~~~~--~~i~~~~~~~~~y~~~~ 67 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIV------NTPGVAADLSHINTP--AKVTGYLGPEELKKALK 67 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEEecC------ccceeehHhHhCCCc--ceEEEecCCCchHHhcC
Confidence 599999998999999999999999987 99999997 478999999998621 244432 33489999
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH----HHHHHHHCCCCCCCcEEEe
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN----TYITMKSAPDLSYKNFTAM 158 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~----~~~~~~~~~~~~~~~i~~~ 158 (329)
|||+||+++|.|++||++|.+++..|+++++++++.|++++ |++|+|++|||+|+| ++++++.+ ++|++|++|.
T Consensus 68 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvDv~~~i~t~~~~~~s-~~p~~rviG~ 145 (310)
T cd01337 68 GADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC-PKALILIISNPVNSTVPIAAEVLKKAG-VYDPKRLFGV 145 (310)
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchhhHHHHHHHHHHHhc-CCCHHHEEee
Confidence 99999999999999999999999999999999999999997 999999999999997 88888888 9999998888
Q ss_pred chhHHHHHHHHHHHHhCCCCCCeeEEEEEecC-CCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582 159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH-SLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI 237 (329)
Q Consensus 159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h-g~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~ 237 (329)
|.|||+|+++++|+++|++|++|+.+ ||||| |++|||+||++++. .++ .++ ..+++.+++++++++|++.
T Consensus 146 ~~LDs~R~~~~la~~l~v~~~~V~~~-v~GeHsGds~vp~~S~~~~~----~~~-~~~---~~~~i~~~v~~~g~~Ii~~ 216 (310)
T cd01337 146 TTLDVVRANTFVAELLGLDPAKVNVP-VIGGHSGVTILPLLSQCQPP----FTF-DQE---EIEALTHRIQFGGDEVVKA 216 (310)
T ss_pred echHHHHHHHHHHHHhCcCHHHEEEE-EEecCCCCceeccccccccc----ccC-CHH---HHHHHHHHHHHHHHHHHhC
Confidence 88999999999999999999999977 89999 89999999999763 232 222 3678999999999999997
Q ss_pred c---CCccHHHHHHHHHHHHHHHHhCC---C-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHH
Q psy9582 238 R---GASSAASAASAAIDHIKDWIFGT---E-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRK 308 (329)
Q Consensus 238 k---g~~~~~~~a~~~~~~l~~~i~~~---~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~ 308 (329)
| |+++|+++.+ +.+++++|++| + .+++++ +.+|+ |. +|+|+|+||++ ++|++++++ + +|+++|++
T Consensus 217 k~gkg~t~~~~a~a--~~~iv~aIl~~~~~~~~~~~~s-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-l~~L~~~E~~ 290 (310)
T cd01337 217 KAGAGSATLSMAYA--GARFANSLLRGLKGEKGVIECA-YVESD-VT-EAPFFATPVELGKNGVEKNLG-LGKLNDYEKK 290 (310)
T ss_pred ccCCCCcchhHHHH--HHHHHHHHHHhcCCCcceEEEE-EEecc-CC-CceEEEEEEEEeCCeEEEEeC-CCCCCHHHHH
Confidence 4 7777776653 45899999844 5 677777 66665 65 79999999999 999999998 9 69999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy9582 309 KINLSIEELKNEILSISHL 327 (329)
Q Consensus 309 ~l~~s~~~i~~~~~~~~~~ 327 (329)
+|++|++.|++.++...+|
T Consensus 291 ~l~~S~~~i~~~~~~g~~~ 309 (310)
T cd01337 291 LLEAALPELKKNIEKGVDF 309 (310)
T ss_pred HHHHHHHHHHHHHhhhccc
Confidence 9999999999999988876
No 28
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=4.8e-60 Score=437.92 Aligned_cols=302 Identities=25% Similarity=0.425 Sum_probs=270.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--ccceEeecCcccccCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--LVDVSVHENPITAFKD 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~~~i~~~~~~~~al~~ 83 (329)
+||+|+||+|.+|++++..|+..++.+ +|+|+|++ +..+++++.++|++|..... ..+++.+++ ++++++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~-----~v~lvd~~--~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~ 72 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVK-----EINLISRP--KSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAG 72 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEECc--ccccccccccchhhhchhccCCCcEEEECCC-HHHhCC
Confidence 689999988999999999999999877 89999996 12478899999999864222 224555555 788999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD 162 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld 162 (329)
||+||+++|.|++++++|.+++..|+++++++++.|.+++ |++++|+++||+|++|+++++++ ++|++|++|+ |.||
T Consensus 73 aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npvd~~t~~~~~~~-g~~~~~viG~gt~LD 150 (309)
T cd05294 73 SDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPVDVMTYKALKES-GFDKNRVFGLGTHLD 150 (309)
T ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHhc-CCCHHHEeeccchHH
Confidence 9999999999999999999999999999999999999997 99999999999999999999999 7999996555 8999
Q ss_pred HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCcc
Q psy9582 163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASS 242 (329)
Q Consensus 163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~ 242 (329)
|+|+++++|++++++|++|+++ |+||||++++|+||+++++|+|+.+++..+ .+..+++.+++++++++|++.||+++
T Consensus 151 s~R~~~~la~~l~v~~~~v~~~-viGeHg~s~~~~~S~~~i~g~~~~~~~~~~-~~~~~~i~~~v~~~g~~i~~~kg~t~ 228 (309)
T cd05294 151 SLRFKVAIAKHFNVHISEVHTR-IIGEHGDSMVPLISSTSIGGIPIKRFPEYK-DFDVEKIVETVKNAGQNIISLKGGSE 228 (309)
T ss_pred HHHHHHHHHHHHCcChHHeEEE-EEecCCCceEeeeeecEECCEEHHHhhccc-HHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 9999999999999999999988 789999999999999999999999886533 24567899999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy9582 243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKN 319 (329)
Q Consensus 243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~ 319 (329)
|+++.+ +.+++++|++|+ .++|++++++|+| |++ |+++|+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus 229 ~~~a~~--~~~ii~ail~~~~~v~~vsv~~~g~~~~~~-~~~~svP~~ig~~Gv~~i~~-l~l~~~E~~~l~~s~~~i~~ 304 (309)
T cd05294 229 YGPASA--ISNLVRTIANDERRILTVSTYLEGEIDGIR-DVCIGVPVKLGKNGIEEIVP-IEMDDDEREAFRKSAEIVKK 304 (309)
T ss_pred hhHHHH--HHHHHHHHHCCCCeEEEEEEEECCccCCCC-CeEEEeEEEEcCCccEEEeC-CCCCHHHHHHHHHHHHHHHH
Confidence 866653 348999999998 9999999999997 996 9999999999 999999999 99999999999999999998
Q ss_pred HHHH
Q psy9582 320 EILS 323 (329)
Q Consensus 320 ~~~~ 323 (329)
.++.
T Consensus 305 ~~~~ 308 (309)
T cd05294 305 YTRE 308 (309)
T ss_pred HHhc
Confidence 7753
No 29
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=4.8e-58 Score=425.93 Aligned_cols=297 Identities=28% Similarity=0.444 Sum_probs=265.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKD 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~ 83 (329)
+||+|||| |.+|++++..++..++. +|+|+|++ ++++++.++|+.+...... .+++.+++ ++++++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~------ev~L~D~~----~~~~~~~~~dl~~~~~~~~~~~~i~~~~d-~~~~~~ 70 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELG------DVVLFDIV----EGVPQGKALDIAEAAPVEGFDTKITGTND-YEDIAG 70 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe------EEEEEECC----CchhHHHHHHHHhhhhhcCCCcEEEeCCC-HHHHCC
Confidence 58999999 99999999999988763 79999998 6778888999987643222 34444445 688999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLD 162 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld 162 (329)
||+||+++|.|+++|++|.+++.+|++++++++++|++++ |++++|++|||+|++|+++++++ ++|++|++|. |.+|
T Consensus 71 aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~d~~~~~~~~~s-~~~~~~viG~gt~ld 148 (307)
T PRK06223 71 SDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA-PDAIVIVVTNPVDAMTYVALKES-GFPKNRVIGMAGVLD 148 (307)
T ss_pred CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHh-CCCcccEEEeCCCcH
Confidence 9999999999999999999999999999999999999998 99999999999999999999998 9999997665 6999
Q ss_pred HHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh--cCC
Q psy9582 163 HNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI--RGA 240 (329)
Q Consensus 163 s~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~--kg~ 240 (329)
|+|+++++|++++++|++|+++ |+|+||++++|+||+++++|.|+.+++.++ | .+++.+.++++++++++. ||+
T Consensus 149 s~r~~~~la~~l~v~~~~v~~~-viGehg~s~~p~~S~~~v~g~~~~~~~~~~--~-~~~l~~~v~~~~~~ii~~~~kg~ 224 (307)
T PRK06223 149 SARFRTFIAEELNVSVKDVTAF-VLGGHGDSMVPLVRYSTVGGIPLEDLLSKE--K-LDEIVERTRKGGAEIVGLLKTGS 224 (307)
T ss_pred HHHHHHHHHHHhCcChhhCccc-EEcCCCCcceEchhhCEECCEEHHHhCChH--H-HHHHHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999988 789999999999999999999999886443 3 578999999999999996 677
Q ss_pred ccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHH
Q psy9582 241 SSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELK 318 (329)
Q Consensus 241 ~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~ 318 (329)
+.++.++ ++.++++++++|+ .++|++++++|+||+ +|++||+||++ ++|++++++ ++|+++|+++|++|+++|+
T Consensus 225 t~~~~A~--~~~~ii~ail~~~~~~~~~~v~~~g~yg~-~~~~~s~P~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~ 300 (307)
T PRK06223 225 AYYAPAA--SIAEMVEAILKDKKRVLPCSAYLEGEYGV-KDVYVGVPVKLGKNGVEKIIE-LELDDEEKAAFDKSVEAVK 300 (307)
T ss_pred hhHHHHH--HHHHHHHHHHcCCCcEEEEEEEecCcCCC-CCeEEEeEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence 6666654 3458999999998 999999999999999 89999999999 999999998 9999999999999999999
Q ss_pred HHHHHH
Q psy9582 319 NEILSI 324 (329)
Q Consensus 319 ~~~~~~ 324 (329)
+.++.+
T Consensus 301 ~~~~~~ 306 (307)
T PRK06223 301 KLIEAL 306 (307)
T ss_pred HHHHhc
Confidence 988753
No 30
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=5.2e-58 Score=424.00 Aligned_cols=292 Identities=27% Similarity=0.421 Sum_probs=262.8
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeecCcccccCCcc
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHENPITAFKDAN 85 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~~~~~al~~aD 85 (329)
|+|||| |.+|++++..++..++. +|+|+|++ ++++++.++|+.+...... .+++.+++ ++++++||
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~------eV~L~Di~----e~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dAD 68 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG------DVVLLDIV----EGLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc------EEEEEeCC----CcHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCC
Confidence 689999 99999999999988764 79999999 6677888888887642222 35555555 78999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe-chhHHH
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM-LRLDHN 164 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~ 164 (329)
+||+++|.|++++++|.+++.+|++++++++++|+++| |++++|++|||+|++++++++++ ++|++|++|+ |.+|++
T Consensus 69 iVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~-p~~~iIv~sNP~di~t~~~~~~s-~~~~~rviGlgt~lds~ 146 (300)
T cd01339 69 VVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVTNPLDVMTYVAYKAS-GFPRNRVIGMAGVLDSA 146 (300)
T ss_pred EEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHh-CCCHHHEEEecchHHHH
Confidence 99999999999999999999999999999999999998 99999999999999999999998 9999997665 599999
Q ss_pred HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhc--CCcc
Q psy9582 165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIR--GASS 242 (329)
Q Consensus 165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~k--g~~~ 242 (329)
|+++++|++++++|++|+++ |+|+||++++|+||+++++|.|+.+++.++ .++++.+++++++++|++.| |+++
T Consensus 147 r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~v~g~~~~~~~~~~---~~~~~~~~v~~~~~~ii~~k~~g~t~ 222 (300)
T cd01339 147 RFRYFIAEELGVSVKDVQAM-VLGGHGDTMVPLPRYSTVGGIPLTELITKE---EIDEIVERTRNGGAEIVNLLKTGSAY 222 (300)
T ss_pred HHHHHHHHHhCCCccceEEE-EEeCCCCcceecceecEECCEEHHHhcChH---HHHHHHHHHHHHHHHHHhhcCCCchh
Confidence 99999999999999999988 689999999999999999999999887654 35889999999999999976 7777
Q ss_pred HHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582 243 AASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE 320 (329)
Q Consensus 243 ~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~ 320 (329)
|++++ ++.++++++++|+ .++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|++.|++.
T Consensus 223 ~~~a~--~~~~i~~ail~~~~~i~~~s~~~~g~yg~~-~~~~s~P~~ig~~G~~~~~~-l~l~~~E~~~l~~s~~~l~~~ 298 (300)
T cd01339 223 YAPAA--AIAEMVEAILKDKKRVLPCSAYLEGEYGIK-DIFVGVPVVLGKNGVEKIIE-LDLTDEEKEAFDKSVESVKEL 298 (300)
T ss_pred HHHHH--HHHHHHHHHHcCCCcEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 77655 3458999999998 9999999999999995 9999999999 999999998 999999999999999999987
Q ss_pred H
Q psy9582 321 I 321 (329)
Q Consensus 321 ~ 321 (329)
+
T Consensus 299 ~ 299 (300)
T cd01339 299 I 299 (300)
T ss_pred h
Confidence 5
No 31
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=4.5e-58 Score=423.85 Aligned_cols=296 Identities=20% Similarity=0.276 Sum_probs=260.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC---cccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN---PITA 80 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~---~~~a 80 (329)
++.||+||||+|+||+++++.|+..++.. ||+|+|++ ++++.++|++|... ...+...++ .+++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~-----elvL~Di~------~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~ 73 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVS-----ELSLYDIV------GAPGVAADLSHIDT--PAKVTGYADGELWEKA 73 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCC-----EEEEEecC------CCcccccchhhcCc--CceEEEecCCCchHHH
Confidence 45799999999999999999999888876 99999996 35788999999753 123433322 2899
Q ss_pred cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHH----HHCCCCCCCcEE
Q psy9582 81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM----KSAPDLSYKNFT 156 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~----~~~~~~~~~~i~ 156 (329)
++|||+||+++|.+++++++|.+++..|+++++++++.|++++ |+++|+++|||+|.++++++ +.+ ++||+|++
T Consensus 74 l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~s-g~p~~~vi 151 (321)
T PTZ00325 74 LRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKAG-VYDPRKLF 151 (321)
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhcc-CCChhhee
Confidence 9999999999999999999999999999999999999999996 99999999999999999995 667 99999987
Q ss_pred EechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCC-ceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHH
Q psy9582 157 AMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL-SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEII 235 (329)
Q Consensus 157 ~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~-~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~ 235 (329)
|.+.|||+||++++|++++++|++|+++ ||||||+ ++||+||++ |.|+. ++ ..+++.+++++++++|+
T Consensus 152 G~g~LDs~R~r~~la~~l~v~~~~V~~~-VlGeHGd~s~v~~~S~~---g~~l~----~~---~~~~i~~~v~~~g~~Ii 220 (321)
T PTZ00325 152 GVTTLDVVRARKFVAEALGMNPYDVNVP-VVGGHSGVTIVPLLSQT---GLSLP----EE---QVEQITHRVQVGGDEVV 220 (321)
T ss_pred echhHHHHHHHHHHHHHhCcChhheEEE-EEeecCCcccccchhcc---CCCCC----HH---HHHHHHHHHHHHHHHHH
Confidence 7778999999999999999999999988 8999999 899999999 67763 22 35789999999999999
Q ss_pred Hhc---CCccHHHHHHHHHHHHHHHHhC---CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHH
Q psy9582 236 SIR---GASSAASAASAAIDHIKDWIFG---TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSR 307 (329)
Q Consensus 236 ~~k---g~~~~~~~a~~~~~~l~~~i~~---~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~ 307 (329)
+.| |+|.|+++.+ +..++++|+. |+ +++|++ +.+|+||. +|+|+|+||++ ++|++++++.++|+++|+
T Consensus 221 ~~k~~kg~t~~g~a~a--~~~i~~ail~~~~~~~~v~~~~-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~ 296 (321)
T PTZ00325 221 KAKEGAGSATLSMAYA--AAEWSTSVLKALRGDKGIVECA-FVESDMRP-ECPFFSSPVELGKEGVERVLPIGPLNAYEE 296 (321)
T ss_pred hcccCCCCchHHHHHH--HHHHHHHHHhhcCCCCCeEEEE-EEecCCCC-CCeEEEEEEEEcCCeeEEEcCCCCCCHHHH
Confidence 976 6777777653 4589999984 46 899985 88999997 89999999999 999999997579999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhC
Q psy9582 308 KKINLSIEELKNEILSISHLIR 329 (329)
Q Consensus 308 ~~l~~s~~~i~~~~~~~~~~~~ 329 (329)
++|++|++.|++.++..+.|.+
T Consensus 297 ~~l~~S~~~i~~~~~~~~~~~~ 318 (321)
T PTZ00325 297 ELLEAAVPDLKKNIEKGLEFAR 318 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998863
No 32
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=7.9e-57 Score=416.43 Aligned_cols=294 Identities=19% Similarity=0.294 Sum_probs=255.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe--ecCcccccC
Q psy9582 6 VRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV--HENPITAFK 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~--~~~~~~al~ 82 (329)
|||+||||+|.+|+++++.|.. .+... +++|+|++ +. .+++++|++|.. ....+.. .++.+++++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~-----el~L~d~~----~~-~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~ 68 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGS-----ELSLYDIA----PV-TPGVAVDLSHIP--TAVKIKGFSGEDPTPALE 68 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCcc-----EEEEEecC----CC-CcceehhhhcCC--CCceEEEeCCCCHHHHcC
Confidence 6899999999999999999865 45544 99999998 32 467888998742 1123333 345589999
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHH----HHCCCCCCCcEEEe
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITM----KSAPDLSYKNFTAM 158 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~----~~~~~~~~~~i~~~ 158 (329)
|+|+||+++|.+++++++|.+++..|+++++++++.|++++ |+++++++|||+|+||++++ +++ ++|++|++|.
T Consensus 69 ~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~~~~~~~s-g~p~~rvig~ 146 (312)
T PRK05086 69 GADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAAEVLKKAG-VYDKNKLFGV 146 (312)
T ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHHHHHHHhc-CCCHHHEEee
Confidence 99999999999999999999999999999999999999996 99999999999999999988 887 9999998888
Q ss_pred chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCC-ceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582 159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSL-SMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI 237 (329)
Q Consensus 159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~-~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~ 237 (329)
|.|||+|+++++|++++++|++|+++ ||||||+ ++||+||++ +|.|+. ++ ..+++.+++++++++|++.
T Consensus 147 ~~Lds~R~~~~ia~~l~~~~~~v~~~-v~GeHg~~s~~p~~S~~--~g~~l~----~~---~~~~i~~~v~~~g~~ii~~ 216 (312)
T PRK05086 147 TTLDVIRSETFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV--PGVSFT----EQ---EVADLTKRIQNAGTEVVEA 216 (312)
T ss_pred ecHHHHHHHHHHHHHhCCChhheEEE-EEEecCCCceecccccc--CCccCC----HH---HHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999977 8999976 999999999 888873 22 3578999999999999998
Q ss_pred c---CCccHHHHHHHHHHHHHHHHhC---CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHH
Q psy9582 238 R---GASSAASAASAAIDHIKDWIFG---TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRK 308 (329)
Q Consensus 238 k---g~~~~~~~a~~~~~~l~~~i~~---~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~ 308 (329)
| |++.|+++.+ +.+++++|+. |+ +++|++ +.+|+ |. +|+|||+||++ ++|++++++ + +|+++|++
T Consensus 217 k~~~g~t~~~~a~a--~~~~v~ai~~~~~~~~~v~~~~-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~ 290 (312)
T PRK05086 217 KAGGGSATLSMGQA--AARFGLSLVRALQGEQGVVECA-YVEGD-GK-YARFFAQPVLLGKNGVEERLP-IGTLSAFEQN 290 (312)
T ss_pred ccCCCCchhhHHHH--HHHHHHHHHhcCCCCCcEEEEE-EEecc-CC-cceEEEEEEEEcCCeeEEEcC-CCCCCHHHHH
Confidence 7 7777766653 4588889884 46 899976 77776 76 78999999999 999999999 7 99999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhC
Q psy9582 309 KINLSIEELKNEILSISHLIR 329 (329)
Q Consensus 309 ~l~~s~~~i~~~~~~~~~~~~ 329 (329)
+|++|++.|++.++..++|++
T Consensus 291 ~l~~s~~~i~~~~~~g~~~~~ 311 (312)
T PRK05086 291 ALEGMLDTLKKDIALGEEFVN 311 (312)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999864
No 33
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=8.9e-57 Score=415.55 Aligned_cols=290 Identities=21% Similarity=0.296 Sum_probs=251.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~~ 83 (329)
+.||+||||+|+||+++++.|+.+++++ ||+|+|++ + ++++++||+|+..... ..+..+++.+++++|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~Di~----~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~ 86 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVS-----ELHLYDIA----N--TPGVAADVSHINTPAQVRGFLGDDQLGDALKG 86 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCC-----EEEEEecC----C--CCeeEchhhhCCcCceEEEEeCCCCHHHHcCC
Confidence 4799999999999999999999999987 99999999 4 6788999999864321 112234455899999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh----hHHHHHHHHCCCCCCCcEEEec
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN----TNTYITMKSAPDLSYKNFTAML 159 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~----~~~~~~~~~~~~~~~~~i~~~t 159 (329)
||+||+++|.|+++|++|.+++..|.++++++++++++++ |+++++++|||+| ++++.+++.+ ++||+|++|++
T Consensus 87 aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s-~~p~~~viG~~ 164 (323)
T PLN00106 87 ADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAG-VYDPKKLFGVT 164 (323)
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcC-CCCcceEEEEe
Confidence 9999999999999999999999999999999999999997 9999999999999 8999999988 99999988888
Q ss_pred hhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC-CceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh-
Q psy9582 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI- 237 (329)
Q Consensus 160 ~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg-~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~- 237 (329)
.||++|+++++|+++|++|.+|+++ |+|+|| ++|||+||++++. .+ +.++ ..+++.+++++++++|++.
T Consensus 165 ~LDs~Rl~~~lA~~lgv~~~~V~~~-ViGeHg~~s~vp~~S~~~~~----~~-~~~~---~~~~i~~~v~~~g~~Ii~~k 235 (323)
T PLN00106 165 TLDVVRANTFVAEKKGLDPADVDVP-VVGGHAGITILPLLSQATPK----VS-FTDE---EIEALTKRIQNGGTEVVEAK 235 (323)
T ss_pred cchHHHHHHHHHHHhCCChhheEEE-EEEeCCCccEeeehhcceec----cc-CCHH---HHHHHHHHHHHHHHHHHhCc
Confidence 8999999999999999999999988 789996 5999999999653 22 2222 3578999999999999997
Q ss_pred --cCCccHHHHHHHHHHHHHHHHhC---CC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCC-CCCHHHHHH
Q psy9582 238 --RGASSAASAASAAIDHIKDWIFG---TE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNL-EIDKFSRKK 309 (329)
Q Consensus 238 --kg~~~~~~~a~~~~~~l~~~i~~---~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~-~l~~~E~~~ 309 (329)
||++.|+++.+ +.+++++|+. |+ .++||| +.+|+| ..++|||+||++ ++|++++++ + +|+++|+++
T Consensus 236 ~~kg~t~~~~a~a--~~~ii~ail~~~~~~~~v~~~s-~~~~~~--~~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~ 309 (323)
T PLN00106 236 AGAGSATLSMAYA--AARFADACLRGLNGEADVVECS-YVQSEV--TELPFFASKVRLGRNGVEEVLG-LGPLSEYEQKG 309 (323)
T ss_pred cCCCCchHHHHHH--HHHHHHHHHhccCCCceEEEEE-EECccc--CCceEEEEEEEEcCCeeEEEcC-CCCCCHHHHHH
Confidence 47777766653 4588999987 46 899999 556665 223999999999 999999999 7 999999999
Q ss_pred HHHHHHHHHHHHH
Q psy9582 310 INLSIEELKNEIL 322 (329)
Q Consensus 310 l~~s~~~i~~~~~ 322 (329)
|++|++.|++.++
T Consensus 310 l~~S~~~i~~~~~ 322 (323)
T PLN00106 310 LEALKPELKASIE 322 (323)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998875
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=3e-53 Score=385.35 Aligned_cols=257 Identities=30% Similarity=0.500 Sum_probs=234.5
Q ss_pred EEEEcCCCchHHHHHHHHHhCC--CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582 8 ISITGAAGQIGYNIIFRIANGD--LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA 84 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~--~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a 84 (329)
|+||||+|.+|+++++.|+..+ ... +|+|+|++ ++++++.++|++|..... ..+++.++|.+++++||
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~-----el~L~D~~----~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~a 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAI-----ELVLYDID----EEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDA 71 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcce-----EEEEEeCC----cccchHHHHHHHHhhhhccCcEEEECCchHHHhCCC
Confidence 6899998999999999999988 444 99999999 788999999999876444 35777777879999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEechhHHH
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHN 164 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~ 164 (329)
|+||+++|.++++|++|.+++.+|++++++++++|+++| |++|+|++|||+|++|+++++++ ++|++|++|.|.+|+.
T Consensus 72 DiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~d~~t~~~~~~s-g~~~~kviG~~~ld~~ 149 (263)
T cd00650 72 DVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPVDIITYLVWRYS-GLPKEKVIGLGTLDPI 149 (263)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHHh-CCCchhEEEeecchHH
Confidence 999999999999999999999999999999999999998 99999999999999999999999 9999997776559999
Q ss_pred HHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHhcCCccHH
Q psy9582 165 RAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISIRGASSAA 244 (329)
Q Consensus 165 r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~kg~~~~~ 244 (329)
|+++++|+++++++++|+.+ |||+||++++|+||+++
T Consensus 150 r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~------------------------------------------ 186 (263)
T cd00650 150 RFRRILAEKLGVDPDDVKVY-ILGEHGGSQVPDWSTVR------------------------------------------ 186 (263)
T ss_pred HHHHHHHHHhCCCccceEEE-EEEcCCCceEeccccch------------------------------------------
Confidence 99999999999999999966 89999999999999974
Q ss_pred HHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy9582 245 SAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321 (329)
Q Consensus 245 ~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~ 321 (329)
++. + +.+++++|.+|+ .++|++++++|+||+|+|++||+||++ ++|++++++ ++|+++|+++|+++++.++..+
T Consensus 187 ~a~-~-~~~ii~ai~~~~~~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~-~~l~~~e~~~l~~s~~~~~~~~ 262 (263)
T cd00650 187 IAT-S-IADLIRSLLNDEGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIE-VGLTDFELEKLQKSADTLKKEL 262 (263)
T ss_pred HHH-H-HHHHHHHHHcCCCEEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHHHHHHHh
Confidence 122 2 348899999998 999999999999998899999999999 999999999 9999999999999999999765
No 35
>KOG1494|consensus
Probab=100.00 E-value=1.5e-48 Score=340.20 Aligned_cols=300 Identities=23% Similarity=0.334 Sum_probs=251.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFK 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~ 82 (329)
+..||+|+||+|.||+.+..+|..+.+.+ ++.|||+. ...|.+.|++|..... ...+....+++++++
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-----~LaLYDi~------~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~ 95 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIA------NTPGVAADLSHINTNSSVVGFTGADGLENALK 95 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccc-----eeeeeecc------cCCcccccccccCCCCceeccCChhHHHHHhc
Confidence 35799999999999999999999999988 99999998 2578999999986532 233444457889999
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHH---HCCCCCCCcEEEec
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMK---SAPDLSYKNFTAML 159 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~---~~~~~~~~~i~~~t 159 (329)
+||+|||.||+||||||+|+|++..|+-++++++..+.++| |+|.+.++|||+|...+++.+ ..+.++|+|+.|+|
T Consensus 96 ~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVT 174 (345)
T KOG1494|consen 96 GADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC-PNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVT 174 (345)
T ss_pred CCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC-ccceeEeecCcccccchHHHHHHHHcCCCCccceecee
Confidence 99999999999999999999999999999999999999999 999999999999987776654 35579999999999
Q ss_pred hhHHHHHHHHHHHHhCCCC-CCeeEEEEEecCC-CceeecccCCeecceehhhhhccCccchhhhHHHHHhhhhHHHHHh
Q psy9582 160 RLDHNRAIAKLASKLNEPV-SSIKKVFVWGNHS-LSMYPDYRYATVNGVLIRDMINNNSFWNKNVFLPAISRRGEEIISI 237 (329)
Q Consensus 160 ~lds~r~~~~la~~l~~~~-~~v~~~~v~G~hg-~~~~p~~s~~~v~~~p~~~~~~~~~~~~~~~l~~~v~~~~~~i~~~ 237 (329)
.||..|+++++++.++++| ++++.. |+|+|. .+.+|++|++.. ...+- ++ ..+.++.++++.|.||++.
T Consensus 175 tLDvVRA~tFv~~~~~~~p~~~v~VP-VIGGHaG~TIlPLlSQ~~p----~~~~~-~~---~~~~Lt~RiQ~gGtEVV~A 245 (345)
T KOG1494|consen 175 TLDVVRANTFVAEVLNLDPAEDVDVP-VIGGHAGITIIPLLSQCKP----PFRFT-DD---EIEALTHRIQNGGTEVVKA 245 (345)
T ss_pred hhhhhhHHHHHHHHhCCCchhcCCcc-eecCcCCceEeeecccCCC----cccCC-HH---HHHHHHHHHHhCCceEEEe
Confidence 9999999999999999999 557755 788885 799999999974 23222 22 3577888999999999998
Q ss_pred c-CCccH-HHHHHHHHH---HHHHHHhCCCcEEEEE-eecCCCCCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582 238 R-GASSA-ASAASAAID---HIKDWIFGTENWVTMG-IPSDGSYNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKI 310 (329)
Q Consensus 238 k-g~~~~-~~~a~~~~~---~l~~~i~~~~~i~~~~-v~~~g~ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l 310 (329)
| |.+|+ +++|+|.+. .+++.+.+++.+..|+ |.++ .+++| ||+.|+++ ++|++++....+|+++|++.|
T Consensus 246 KaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~-~~~~~---fFaspv~Lg~~Gv~~v~~l~~lsd~E~~~l 321 (345)
T KOG1494|consen 246 KAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASP-VTELP---FFATPVTLGKKGVEEVLGLGKLSDYEEKAL 321 (345)
T ss_pred ccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEecc-ccCcc---ceeceEEecCCceeeecCCCccCHHHHHHH
Confidence 8 66666 777766543 3455556666555565 4554 35664 99999999 999999999888999999999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q psy9582 311 NLSIEELKNEILSISHLI 328 (329)
Q Consensus 311 ~~s~~~i~~~~~~~~~~~ 328 (329)
+.+..+||+.|+...+|.
T Consensus 322 ~~~~~eLk~sI~KGv~F~ 339 (345)
T KOG1494|consen 322 EAAKPELKKSIEKGVTFV 339 (345)
T ss_pred HHHHHHHHHHHHhhHHHH
Confidence 999999999999998874
No 36
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=2.7e-36 Score=257.53 Aligned_cols=166 Identities=31% Similarity=0.389 Sum_probs=149.8
Q ss_pred chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhccC---ccchhhhHHHHHhhhhHHHH
Q psy9582 159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---SFWNKNVFLPAISRRGEEII 235 (329)
Q Consensus 159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~~---~~~~~~~l~~~v~~~~~~i~ 235 (329)
|.||++|+++++|+++|++|++++++ ||||||+++||+||+++++|.|+.++.+.. +.+..+++.+.+++++++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~-ViGeHg~s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAY-VIGEHGDSQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEE-EEBSSSTTEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEE-EEecCCcceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 68999999999999999999999988 899999999999999999999998776442 14567899999999999999
Q ss_pred Hhc-CCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCCCCCCCC-eEEEEeEEE-cCccEEeccCCCCCHHHHHHHH
Q psy9582 236 SIR-GASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGSYNVPKD-IIFGFPVKI-KNSKYKIIQNLEIDKFSRKKIN 311 (329)
Q Consensus 236 ~~k-g~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~ygip~~-~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~ 311 (329)
+.| |.++|++|. + +.+++++|+.|. .++|+|++++|+||++.+ +|||+||++ ++|+++++++++|+++|+++|+
T Consensus 80 ~~k~g~t~~s~A~-a-~~~~v~ail~~~~~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~ 157 (174)
T PF02866_consen 80 KAKGGSTSYSIAA-A-AARIVEAILKDERRILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQEKLK 157 (174)
T ss_dssp HHHSSSCHHHHHH-H-HHHHHHHHHTTHTEEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHHHHH
T ss_pred eeccccCcCCHHH-H-HHHHHHHHhhcccccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHHHHH
Confidence 999 666665544 3 458999999997 999999999999999655 999999999 9999999987999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy9582 312 LSIEELKNEILSISHL 327 (329)
Q Consensus 312 ~s~~~i~~~~~~~~~~ 327 (329)
+|++.|++.++.+++|
T Consensus 158 ~sa~~l~~~i~~~~~f 173 (174)
T PF02866_consen 158 ESAKELKKEIEKGLEF 173 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999887
No 37
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=100.00 E-value=4e-32 Score=260.29 Aligned_cols=294 Identities=16% Similarity=0.175 Sum_probs=206.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCC-C-ceEEEEecCCcccccchhhhHhhhhhccc---CCccceEeecCcccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQ-P-IILQLLEASNKKSQKAIKGVIMEIEDCIF---PLLVDVSVHENPITA 80 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~-~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~~~i~~~~~~~~a 80 (329)
+||+|||| ||+.++.|+..-+..+++ + .||+|+|++ +++++- +..+..... ....++..|+|.++|
T Consensus 1 ~KI~iIGg----GS~~tp~li~~l~~~~~~l~~~ei~L~Did----~~Rl~~-v~~l~~~~~~~~g~~~~v~~ttD~~~A 71 (425)
T cd05197 1 VKIAIIGG----GSSFTPELVSGLLKTPEELPISEVTLYDID----EERLDI-ILTIAKRYVEEVGADIKFEKTMDLEDA 71 (425)
T ss_pred CEEEEECC----chHhHHHHHHHHHcChhhCCCCEEEEEcCC----HHHHHH-HHHHHHHHHHhhCCCeEEEEeCCHHHH
Confidence 59999999 444555555432222222 3 399999999 556653 223322111 122478889999999
Q ss_pred cCCccEEEEe---CCC---------CCCCC---C-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582 81 FKDANIAILI---GSF---------PRKSN---M-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT 140 (329)
Q Consensus 81 l~~aDiVi~~---~g~---------~~~~g---~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~ 140 (329)
++||||||.+ +|. |.+.| + -......+|+++++++++.|+++| |+||+|++|||++++|
T Consensus 72 l~gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~-P~a~lin~TNP~di~t 150 (425)
T cd05197 72 IIDADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLS-PDAWYLNFTNPAGEVT 150 (425)
T ss_pred hCCCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhC-CCcEEEecCChHHHHH
Confidence 9999999996 332 22332 1 255667899999999999999998 9999999999999999
Q ss_pred HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-cCCCceeecccCCeecceehhhhhc----cC
Q psy9582 141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMIN----NN 215 (329)
Q Consensus 141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~----~~ 215 (329)
+++++++ |+.|++|.|.. +.|+++.+|+.+|+++++|+.+ ++| ||| |+||+++++|+|+...+. +.
T Consensus 151 ~a~~~~~---p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~-v~GlnHg----~~~s~~~~~G~~l~p~l~~~~~~~ 221 (425)
T cd05197 151 EAVRRYV---PPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQ-YAGLNHG----IWLNRVRYNGGDVTPKLDEWVEEK 221 (425)
T ss_pred HHHHHhC---CCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEE-EEeccCe----EeeEeEEECCeecHHHHHHHHhcc
Confidence 9999986 56788787765 8999999999999999999988 789 996 999999999988762221 10
Q ss_pred c--------------cc--------------------hhhhHHH----H----------HhhhhH---HHH---------
Q psy9582 216 S--------------FW--------------------NKNVFLP----A----------ISRRGE---EII--------- 235 (329)
Q Consensus 216 ~--------------~~--------------------~~~~l~~----~----------v~~~~~---~i~--------- 235 (329)
. .| ..++..+ + +.+... +..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~ 301 (425)
T cd05197 222 SKDWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSV 301 (425)
T ss_pred CccccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCCh
Confidence 0 00 0000000 0 011111 111
Q ss_pred ---HhcCCccHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHH
Q psy9582 236 ---SIRGASSAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKK 309 (329)
Q Consensus 236 ---~~kg~~~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~ 309 (329)
..++. .+ ++ -.++ .++++|.+|+ .++.++|.++|. -++|+|+++++||++ ++|+.++-- .+|++..+++
T Consensus 302 ~~~~~r~~-~~-~~-e~a~-~ii~ai~~~~~~~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~L 376 (425)
T cd05197 302 VELIKRGG-RK-YS-EAAI-PLIRALLNDNGARFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGL 376 (425)
T ss_pred hhhhhcCC-cc-cH-HHHH-HHHHHHHcCCCeEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHH
Confidence 11111 11 11 1123 8999999998 999999999998 699999999999999 999999876 8999988887
Q ss_pred HHHHHHHHHHHHHH
Q psy9582 310 INLSIEELKNEILS 323 (329)
Q Consensus 310 l~~s~~~i~~~~~~ 323 (329)
++.-...-+-.+++
T Consensus 377 i~~~~~~e~l~veA 390 (425)
T cd05197 377 LRQRKMRERLALEA 390 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 77644444334443
No 38
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=100.00 E-value=2.2e-33 Score=230.98 Aligned_cols=141 Identities=28% Similarity=0.479 Sum_probs=131.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+||||+|.+|+++++.|+.+++.+ ||+|+|++ +++++|.++|++|....+..+..++.+.+++++|||
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~-----ei~L~D~~----~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aD 71 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLAD-----EIVLIDIN----EDKAEGEALDLSHASAPLPSPVRITSGDYEALKDAD 71 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSS-----EEEEEESS----HHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----ceEEeccC----cccceeeehhhhhhhhhccccccccccccccccccc
Confidence 699999999999999999999999987 99999999 778999999999987655566777778899999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEE
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA 157 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~ 157 (329)
+||+++|.++++|++|.+++..|+++++++++++.+++ |+++++++|||+|++|+++++++ ++|++|++|
T Consensus 72 ivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNPvd~~t~~~~~~s-~~~~~kviG 141 (141)
T PF00056_consen 72 IVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNPVDVMTYVAQKYS-GFPPNKVIG 141 (141)
T ss_dssp EEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSSHHHHHHHHHHHH-TSSGGGEEE
T ss_pred EEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCcHHHHHHHHHHhh-CcCcccCcC
Confidence 99999999999999999999999999999999999998 99999999999999999999999 999999765
No 39
>PRK15076 alpha-galactosidase; Provisional
Probab=100.00 E-value=5e-31 Score=253.65 Aligned_cols=294 Identities=14% Similarity=0.124 Sum_probs=207.1
Q ss_pred CEEEEEcCCCchHHHHHH--HHH-hCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhccc--CCccceEeecCccc
Q psy9582 6 VRISITGAAGQIGYNIIF--RIA-NGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDCIF--PLLVDVSVHENPIT 79 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~--~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~~~--~~~~~i~~~~~~~~ 79 (329)
+||+|||| |++|.+.+. .++ ..++.+ .||+|+|++ +++++ +... +++... ....+++.++|.++
T Consensus 2 ~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~----~evvLvDid----~er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~e 71 (431)
T PRK15076 2 PKITFIGA-GSTVFTKNLLGDILSVPALRD----AEIALMDID----PERLEESEIV-ARKLAESLGASAKITATTDRRE 71 (431)
T ss_pred cEEEEECC-CHHHhHHHHHHHHhhCccCCC----CEEEEECCC----HHHHHHHHHH-HHHHHHhcCCCeEEEEECCHHH
Confidence 58999999 999988766 665 234332 189999999 66666 3333 444321 12246777888899
Q ss_pred ccCCccEEEEeCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 80 AFKDANIAILIGSFP-RKSN--------------MERSEL--------LAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 80 al~~aDiVi~~~g~~-~~~g--------------~~~~~~--------~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
+++||||||++++.+ ++++ ++|.+. +.+|++++++++++|+++| |+||+|++|||+
T Consensus 72 al~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~-p~a~iin~tNP~ 150 (431)
T PRK15076 72 ALQGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVC-PDALLLNYVNPM 150 (431)
T ss_pred HhCCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHC-CCeEEEEcCChH
Confidence 999999999998775 3433 445555 8999999999999999998 999999999999
Q ss_pred hhHHHHHHHHCCCCCCCcEEEe--chhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeecceehhhhhcc
Q psy9582 137 NTNTYITMKSAPDLSYKNFTAM--LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINN 214 (329)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~i~~~--t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~~~p~~~~~~~ 214 (329)
+++|++++ ++|+.|++|. +.+|+. +.+|+.+|+++++|+..+..-|| +.|+.+.+.+|..+...+.+
T Consensus 151 divt~~~~----~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH----~~W~~~~~~~G~D~~p~l~~ 219 (431)
T PRK15076 151 AMNTWAMN----RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINH----MAWYLELERKGEDLYPELRA 219 (431)
T ss_pred HHHHHHHh----cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecc----hhhheeeeECCcchHHHHHH
Confidence 99999997 4456786665 577764 88999999999999988543399 88888888776554311100
Q ss_pred ----------C-------------c-----------cc--h--hhhHHHHHh-------hhh-------HHHH-HhcCCc
Q psy9582 215 ----------N-------------S-----------FW--N--KNVFLPAIS-------RRG-------EEII-SIRGAS 241 (329)
Q Consensus 215 ----------~-------------~-----------~~--~--~~~l~~~v~-------~~~-------~~i~-~~kg~~ 241 (329)
+ | .| . .++..+... ++. .+.. +.++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (431)
T PRK15076 220 AAAEGQTRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAE 299 (431)
T ss_pred HHhccCchhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCC
Confidence 0 0 01 1 222222211 011 1111 122221
Q ss_pred cHHH--HHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHH
Q psy9582 242 SAAS--AASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEE 316 (329)
Q Consensus 242 ~~~~--~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~ 316 (329)
++.. .+-.++ .++++|.+|. .++.++|.++|. -++|+|.++++||.+ ++|+.++.- .+|++..+++++.-...
T Consensus 300 ~~~~~~~~e~a~-~ii~ai~~~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~~ 377 (431)
T PRK15076 300 RIEIKRSREYAS-TIIEAIETGEPSVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNINV 377 (431)
T ss_pred ccccccchHHHH-HHHHHHhcCCceEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHHH
Confidence 1100 112234 8999999998 999999999998 699999999999999 999999987 89999999887765444
Q ss_pred HHHHHHH
Q psy9582 317 LKNEILS 323 (329)
Q Consensus 317 i~~~~~~ 323 (329)
-+-.+++
T Consensus 378 e~l~veA 384 (431)
T PRK15076 378 QELTVEA 384 (431)
T ss_pred HHHHHHH
Confidence 4434443
No 40
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=100.00 E-value=8.1e-31 Score=250.88 Aligned_cols=293 Identities=14% Similarity=0.156 Sum_probs=201.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCC-C-ceEEEEecCCcccccchhhhH---hhhhhcccCCccceEeecCcccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQ-P-IILQLLEASNKKSQKAIKGVI---MEIEDCIFPLLVDVSVHENPITA 80 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~-~ei~L~D~~~~~~~~~~~~~~---~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
+||+|||| |+ +.++.|+..-+...++ + .||+|+|+++ +++++... ..+.+.. .....+..|+|.++|
T Consensus 1 ~KI~iIGa-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~---~~rl~~v~~~~~~~~~~~-~~~~~v~~t~d~~~a 72 (419)
T cd05296 1 MKLTIIGG-GS---SYTPELIEGLIRRYEELPVTELVLVDIDE---EEKLEIVGALAKRMVKKA-GLPIKVHLTTDRREA 72 (419)
T ss_pred CEEEEECC-ch---HhHHHHHHHHHhccccCCCCEEEEecCCh---HHHHHHHHHHHHHHHHhh-CCCeEEEEeCCHHHH
Confidence 69999999 44 3444443321111111 2 2999999992 24454322 2222211 122478889999999
Q ss_pred cCCccEEEEeCCCCCCCCCC--------------------HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582 81 FKDANIAILIGSFPRKSNME--------------------RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT 140 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~--------------------~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~ 140 (329)
++||||||++.+....++.+ ......+|++++++++++|+++| |+||+|++|||++++|
T Consensus 73 l~gadfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~-Pda~lin~TNP~~ivt 151 (419)
T cd05296 73 LEGADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA-PDAWLINFTNPAGIVT 151 (419)
T ss_pred hCCCCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC-CCeEEEEecCHHHHHH
Confidence 99999999987655433332 33457899999999999999998 9999999999999999
Q ss_pred HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-cCCCceeecccCCeecceehhhhhcc-----
Q psy9582 141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMINN----- 214 (329)
Q Consensus 141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~~----- 214 (329)
+++++.+ +.|++|.|..+ .|+++.+|+.+|+++++++.+ ++| || +.|+.+.+.+|..+..-+.+
T Consensus 152 ~a~~k~~----~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~-v~GlNH----~~w~~~~~~~G~D~~p~l~~~~~~~ 221 (419)
T cd05296 152 EAVLRHT----GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFID-YAGLNH----LGWLRRVLLDGEDVLPELLEDLAAL 221 (419)
T ss_pred HHHHHhc----cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEE-EEeccc----ceeeeeeeECCcccHHHHHHHhhhc
Confidence 9999886 46788887664 899999999999999999987 789 99 88888888777655421100
Q ss_pred ------C-------------c-c----c-hhhhHHHHHh----hhh-------HHHH---------------HhcCCccH
Q psy9582 215 ------N-------------S-F----W-NKNVFLPAIS----RRG-------EEII---------------SIRGASSA 243 (329)
Q Consensus 215 ------~-------------~-~----~-~~~~l~~~v~----~~~-------~~i~---------------~~kg~~~~ 243 (329)
. | . | ..++..++.. .++ .+++ ..++++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~~y 301 (419)
T cd05296 222 LSFEEGLLFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGAGY 301 (419)
T ss_pred cccccccchHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCcch
Confidence 0 0 0 0 1122222211 011 1111 11121111
Q ss_pred HHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy9582 244 ASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNE 320 (329)
Q Consensus 244 ~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~ 320 (329)
. -.++ .++++|.+|+ .++.++|.++|. -++|+|+++++||.+ ++|+.++-- .+|++..+++++.....=+-.
T Consensus 302 ~---e~a~-~ii~ai~~~~~~~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~e~l~ 376 (419)
T cd05296 302 S---EAAL-ALISAIYNDKGDIHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAYERLT 376 (419)
T ss_pred H---HHHH-HHHHHHhcCCCcEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHHHHHH
Confidence 1 1123 8999999998 999999999998 699999999999999 999999876 899999888766544333333
Q ss_pred HH
Q psy9582 321 IL 322 (329)
Q Consensus 321 ~~ 322 (329)
++
T Consensus 377 ve 378 (419)
T cd05296 377 IE 378 (419)
T ss_pred HH
Confidence 33
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.97 E-value=1.1e-29 Score=243.82 Aligned_cols=298 Identities=16% Similarity=0.189 Sum_probs=202.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCC-C-ceEEEEecCCcccccchhhhHhhhhhccc---CCccceEeecCcccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQ-P-IILQLLEASNKKSQKAIKGVIMEIEDCIF---PLLVDVSVHENPITA 80 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~-~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~~~i~~~~~~~~a 80 (329)
+||+|||| ||+.++.|+..-+..+++ + .||+|+|++ +++++. +..+..... ....+++.|+|.++|
T Consensus 1 ~KI~iIGa----GS~~tp~li~~l~~~~~~l~~~ei~L~DId----~~rl~~-v~~l~~~~~~~~g~~~~v~~Ttdr~eA 71 (437)
T cd05298 1 FKIVIAGG----GSTYTPGIVKSLLDRKEDFPLRELVLYDID----AERQEK-VAEAVKILFKENYPEIKFVYTTDPEEA 71 (437)
T ss_pred CeEEEECC----cHHHHHHHHHHHHhCcccCCCCEEEEECCC----HHHHHH-HHHHHHHHHHhhCCCeEEEEECCHHHH
Confidence 69999999 444555554432211122 2 399999999 666653 333332211 223478889999999
Q ss_pred cCCccEEEEe---CCC---------CCCCCC--------CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582 81 FKDANIAILI---GSF---------PRKSNM--------ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT 140 (329)
Q Consensus 81 l~~aDiVi~~---~g~---------~~~~g~--------~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~ 140 (329)
++||||||.+ +|. |.|.|. -......||+++++++++.|+++| ||||+|++|||++++|
T Consensus 72 l~gADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~-pda~lin~tNP~~~vt 150 (437)
T cd05298 72 FTDADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYS-PDAWILNYSNPAAIVA 150 (437)
T ss_pred hCCCCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHH
Confidence 9999999996 332 223331 245667899999999999999998 9999999999999999
Q ss_pred HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCCCceeecccCCeec-ceehhhhhc----cC
Q psy9582 141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVN-GVLIRDMIN----NN 215 (329)
Q Consensus 141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg~~~~p~~s~~~v~-~~p~~~~~~----~~ 215 (329)
+++++.. |..|++|+|.-. ..+...+|+.+|+++++++..+..-|| +.|+.+.+.+ |..+...+. +.
T Consensus 151 ~~~~~~~---~~~kviGlC~~~-~~~~~~la~~lg~~~~~v~~~~~GlNH----~~w~~~~~~~~G~D~~p~l~e~~~~~ 222 (437)
T cd05298 151 EALRRLF---PNARILNICDMP-IAIMDSMAAILGLDRKDLEPDYFGLNH----FGWFTKIYDKQGEDLLPKLREHVKEN 222 (437)
T ss_pred HHHHHHC---CCCCEEEECCcH-HHHHHHHHHHhCCCHHHceEEEEeecc----hhhhhheEECCCCchHHHHHHHHhcc
Confidence 9999874 556899999765 357889999999999999987543388 7777777777 665542211 10
Q ss_pred c-------------cch---------------------------hhhHHHHHh-----------hhhHHHH---H---hc
Q psy9582 216 S-------------FWN---------------------------KNVFLPAIS-----------RRGEEII---S---IR 238 (329)
Q Consensus 216 ~-------------~~~---------------------------~~~l~~~v~-----------~~~~~i~---~---~k 238 (329)
+ .|. .+++.++.. ....+++ + ..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~ 302 (437)
T cd05298 223 GYLPPDSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIET 302 (437)
T ss_pred CCCcccccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhc
Confidence 0 010 111111111 0111110 0 00
Q ss_pred CC---ccHHH--HHHHHHHHHHHHHhCCC-cEEEEEeecCCCC-CCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHH
Q psy9582 239 GA---SSAAS--AASAAIDHIKDWIFGTE-NWVTMGIPSDGSY-NVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKI 310 (329)
Q Consensus 239 g~---~~~~~--~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~y-gip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l 310 (329)
+. .++.. .+. .+..++++|.+|+ .++++|++++|+| ++|+|+++|+||++ ++|+.++.- .+|++...+++
T Consensus 303 ~~~~~~~~~~~~ya~-~a~~ii~aI~~d~~~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~ 380 (437)
T cd05298 303 GTAEGSTFHVDVHGE-YIVDLAASIAYNTKERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLM 380 (437)
T ss_pred CChhhhhhhccchHH-HHHHHHHHHHcCCCeEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHH
Confidence 10 01111 122 2348999999998 9999999999998 58899999999999 999999987 89999988887
Q ss_pred HHHHHHHHHHHHH
Q psy9582 311 NLSIEELKNEILS 323 (329)
Q Consensus 311 ~~s~~~i~~~~~~ 323 (329)
+.-...-+-.+++
T Consensus 381 ~~~~~~e~l~veA 393 (437)
T cd05298 381 EQQVAYEKLLVEA 393 (437)
T ss_pred HHHHHHHHHHHHH
Confidence 7654444444443
No 42
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.97 E-value=2.5e-28 Score=235.34 Aligned_cols=295 Identities=14% Similarity=0.131 Sum_probs=208.7
Q ss_pred CEEEEEcCCCchHHHHHH--HHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccc
Q psy9582 6 VRISITGAAGQIGYNIIF--RIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITA 80 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~--~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~a 80 (329)
+||+|||| |++|++++. .++.. .+.+ .+|+|+|++ +++++....++.+... ....+++.++|.+++
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g----~eV~L~Did----~e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~ea 71 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSG----STIALMDID----EERLETVEILAKKIVEELGAPLKIEATTDRREA 71 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCC----CEEEEECCC----HHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHH
Confidence 58999999 999998776 45533 3322 189999999 7777777666655431 122578888998999
Q ss_pred cCCccEEEEeCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582 81 FKDANIAILIGSFPRKSNMER----------------------SELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT 138 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~----------------------~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~ 138 (329)
++|||+||++.+....++.++ .....+|++++.++++.++++| |++|++++|||+++
T Consensus 72 l~~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~-p~a~~i~~tNPv~i 150 (423)
T cd05297 72 LDGADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELC-PDAWLLNYANPMAE 150 (423)
T ss_pred hcCCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHC-CCCEEEEcCChHHH
Confidence 999999999876544333222 4556789999999999999998 89999999999999
Q ss_pred HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEe-cCCCceeecccCCeecceehhhhhcc---
Q psy9582 139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMINN--- 214 (329)
Q Consensus 139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~~--- 214 (329)
+|+++++.+ + .|++|.|.. +.++++.+|+.+++++++|+.. ++| || +.||.+.+.+|..+...+.+
T Consensus 151 ~t~~~~k~~-~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~-~~GlNH----~~w~~~~~~~G~d~~p~l~~~~~ 220 (423)
T cd05297 151 LTWALNRYT-P---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQ-VAGINH----MAWLLKFEYNGEDLYPLLDEWIE 220 (423)
T ss_pred HHHHHHHhC-C---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEE-EEeecc----HhhhhhheECCcchHHHHHHHHh
Confidence 999999998 4 467776644 6789999999999999999988 556 99 77777777776554311111
Q ss_pred C----------------------c--------cc-----hhhhHHHHH--------------hhhhHHHHHhcCC-c---
Q psy9582 215 N----------------------S--------FW-----NKNVFLPAI--------------SRRGEEIISIRGA-S--- 241 (329)
Q Consensus 215 ~----------------------~--------~~-----~~~~l~~~v--------------~~~~~~i~~~kg~-~--- 241 (329)
+ | +| ..++..... .+.-+.-....+. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (423)
T cd05297 221 EGSEEWDQLSPVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEIDK 300 (423)
T ss_pred ccCccchhcccchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchhcc
Confidence 0 0 00 000111100 0000000000000 0
Q ss_pred --cH---HHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHH
Q psy9582 242 --SA---ASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLS 313 (329)
Q Consensus 242 --~~---~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s 313 (329)
.+ .++-. ++ .++++|.+|+ .++.++|.++|. -++|+|+++++||.+ ++|+.++-- .+|++..+++++.-
T Consensus 301 ~~~~~~~~~~e~-a~-~ii~ai~~~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~ 377 (423)
T cd05297 301 EELDPVKRSGEY-AS-PIIEALVTGKPRRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPR 377 (423)
T ss_pred hhccccccchHH-HH-HHHHHHhcCCceEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHH
Confidence 01 11222 33 8999999998 999999999998 799999999999999 999999987 89999988887765
Q ss_pred HHHHHHHHHH
Q psy9582 314 IEELKNEILS 323 (329)
Q Consensus 314 ~~~i~~~~~~ 323 (329)
...-+-.+++
T Consensus 378 ~~~e~l~veA 387 (423)
T cd05297 378 INVQELAVEA 387 (423)
T ss_pred HHHHHHHHHH
Confidence 5544444443
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.96 E-value=6.7e-28 Score=226.72 Aligned_cols=297 Identities=17% Similarity=0.209 Sum_probs=205.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCC-Cc-eEEEEecCCcccccchhhhHhhhhhccc---CCccceEeecCcc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQ-PI-ILQLLEASNKKSQKAIKGVIMEIEDCIF---PLLVDVSVHENPI 78 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~~-ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~~~i~~~~~~~ 78 (329)
++.||+|||| ||+..+.++.+.+...++ |. ||+|+|++ +++++ ...++.+... ....++..++|.+
T Consensus 2 ~~~KI~iIGg----GSt~tp~~v~g~l~~~e~l~~~el~L~Did----~~r~~-~i~~~~~~~v~~~g~~~kv~~ttd~~ 72 (442)
T COG1486 2 KKFKIVIIGG----GSTYTPKLLLGDLARTEELPVRELALYDID----EERLK-IIAILAKKLVEEAGAPVKVEATTDRR 72 (442)
T ss_pred CcceEEEECC----CccccHHHHHHHHhcCccCCcceEEEEeCC----HHHHH-HHHHHHHHHHHhhCCCeEEEEecCHH
Confidence 3479999999 555555555555544344 54 99999999 66665 3334433221 1224678899999
Q ss_pred cccCCccEEEEeC---C---------CCCCCC---C-----CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582 79 TAFKDANIAILIG---S---------FPRKSN---M-----ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT 138 (329)
Q Consensus 79 ~al~~aDiVi~~~---g---------~~~~~g---~-----~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~ 138 (329)
+||+|||||+.+. | .|.|.| + .......|+++++.+|++.|+++| |+||++++|||+.+
T Consensus 73 eAl~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~-P~Aw~lNytNP~~~ 151 (442)
T COG1486 73 EALEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVC-PNAWMLNYTNPAAI 151 (442)
T ss_pred HHhcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhC-CCceEEeccChHHH
Confidence 9999999999863 3 233443 1 244556799999999999999998 99999999999999
Q ss_pred HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCC-CCeeEEEEEe-cCCCceeecccCCeecceehhhhhcc--
Q psy9582 139 NTYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPV-SSIKKVFVWG-NHSLSMYPDYRYATVNGVLIRDMINN-- 214 (329)
Q Consensus 139 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~-~~v~~~~v~G-~hg~~~~p~~s~~~v~~~p~~~~~~~-- 214 (329)
+|+++.+++| .-|++|+|... .-....+|+.|++.+ ++++.. +.| || +.||.+.+.+|.++..-+.+
T Consensus 152 vTeAv~r~~~---~~K~VGlCh~~-~g~~~~lAe~L~~~~~~~l~~~-~aGlNH----~~w~~~~~~~G~d~~p~l~~~~ 222 (442)
T COG1486 152 VTEAVRRLYP---KIKIVGLCHGP-IGIAMELAEVLGLEPREDLRYR-VAGLNH----MVWILRVRDDGEDLYPELLEAL 222 (442)
T ss_pred HHHHHHHhCC---CCcEEeeCCch-HHHHHHHHHHhCCCchhceeEE-Eeechh----hhhhhHhhhcCccchHHHHHHH
Confidence 9999999873 23789998754 467889999999975 999976 456 88 66666666665433210000
Q ss_pred --C-------------ccc---------------------hhhhHH--------------HHHhhhhHHHH---------
Q psy9582 215 --N-------------SFW---------------------NKNVFL--------------PAISRRGEEII--------- 235 (329)
Q Consensus 215 --~-------------~~~---------------------~~~~l~--------------~~v~~~~~~i~--------- 235 (329)
. +.| ....+. +++.++..+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~ 302 (442)
T COG1486 223 EEGGSPSEPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELK 302 (442)
T ss_pred hccccCCccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhh
Confidence 0 000 000111 11222211111
Q ss_pred ------HhcCCc-cHHHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHH
Q psy9582 236 ------SIRGAS-SAASAASAAIDHIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKF 305 (329)
Q Consensus 236 ------~~kg~~-~~~~~a~~~~~~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~ 305 (329)
+.++.+ ...+. +++ .+++||.+|+ .++.++|.++|. -++|+|.++++||++ ++|+.++.. ++|++.
T Consensus 303 ~~p~~~~~~~~~~~~~~e--~a~-~ii~Ai~~~~~~~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~ 378 (442)
T COG1486 303 EKPEELEKRIGAGKYSSE--YAS-NIINAIENNKPSRIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEF 378 (442)
T ss_pred cCchhhhhcCCcccccHH--HHH-HHHHHHhcCCceEEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHH
Confidence 112221 12111 234 8999999998 999999999998 799999999999999 999999988 999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy9582 306 SRKKINLSIEELKNEILS 323 (329)
Q Consensus 306 E~~~l~~s~~~i~~~~~~ 323 (329)
-+++++.....-+-.+++
T Consensus 379 ~~~l~~~~i~~e~l~veA 396 (442)
T COG1486 379 VKGLMHTNINVEELTVEA 396 (442)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888766554444443
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.83 E-value=5.1e-20 Score=156.23 Aligned_cols=156 Identities=14% Similarity=0.157 Sum_probs=109.6
Q ss_pred EEEEEcCCCchHHHH--HHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---HhhhhhcccCCccceEeecCccccc
Q psy9582 7 RISITGAAGQIGYNI--IFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---IMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 7 kI~IiGa~G~vG~~l--a~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
||+|||| |++-.+. ...+....-++. .||+|+|++ +++++.. +..+.+.. ....+++.|+|.++|+
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~---~ei~L~Did----~~RL~~~~~~~~~~~~~~-~~~~~v~~ttd~~eAl 71 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSG---SEIVLMDID----EERLEIVERLARRMVEEA-GADLKVEATTDRREAL 71 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTE---EEEEEE-SC----HHHHHHHHHHHHHHHHHC-TTSSEEEEESSHHHHH
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCC---cEEEEEcCC----HHHHHHHHHHHHHHHHhc-CCCeEEEEeCCHHHHh
Confidence 8999999 6665442 223333332221 299999999 6777632 22222221 2235788899999999
Q ss_pred CCccEEEEeCC------------CCCCCCCC----------HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 82 KDANIAILIGS------------FPRKSNME----------RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 82 ~~aDiVi~~~g------------~~~~~g~~----------~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
+||||||.+.. .|.+.|.. ......|+++.+.++++.|+++| ||||++|+|||+.++
T Consensus 72 ~gADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~-PdAw~iNytNP~~~v 150 (183)
T PF02056_consen 72 EGADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELC-PDAWLINYTNPMGIV 150 (183)
T ss_dssp TTESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSEEEE-SSSHHHH
T ss_pred CCCCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEeccChHHHH
Confidence 99999999743 24454421 45667899999999999999998 999999999999999
Q ss_pred HHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCC
Q psy9582 140 TYITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNE 176 (329)
Q Consensus 140 ~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~ 176 (329)
|+++.+++|+ .|++|+|.-. .-....+|+.||+
T Consensus 151 t~a~~r~~~~---~k~vGlCh~~-~~~~~~la~~L~~ 183 (183)
T PF02056_consen 151 TEALSRYTPK---IKVVGLCHGP-QGTRRQLAKLLGM 183 (183)
T ss_dssp HHHHHHHSTT---SEEEEE-SHH-HHHHHHHHHHHT-
T ss_pred HHHHHHhCCC---CCEEEECCCH-HHHHHHHHHHhCc
Confidence 9999998833 4699999765 4678888888874
No 45
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=99.09 E-value=3.4e-10 Score=97.03 Aligned_cols=106 Identities=20% Similarity=0.232 Sum_probs=72.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh----c---c-------cCCccceE
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED----C---I-------FPLLVDVS 72 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~----~---~-------~~~~~~i~ 72 (329)
||+|+|| |.+|..+|..++..|+ +|+|+|.+ .+.++.....+.. . . .....+++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~ 68 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY-------EVTLYDRS----PEALERARKRIERLLDRLVRKGRLSQEEADAALARIS 68 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS-------EEEEE-SS----HHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEE
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC-------cEEEEECC----hHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcc
Confidence 7999999 9999999999999998 99999999 4433322111111 0 0 01235888
Q ss_pred eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH
Q psy9582 73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY 141 (329)
Q Consensus 73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~ 141 (329)
+++++.++. +||+||.+ ..++.+..+++...+.++|+|+++ ++||...+-..
T Consensus 69 ~~~dl~~~~-~adlViEa--------------i~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl~i~ 120 (180)
T PF02737_consen 69 FTTDLEEAV-DADLVIEA--------------IPEDLELKQELFAELDEICPPDTI--LASNTSSLSIS 120 (180)
T ss_dssp EESSGGGGC-TESEEEE---------------S-SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS-HH
T ss_pred cccCHHHHh-hhheehhh--------------ccccHHHHHHHHHHHHHHhCCCce--EEecCCCCCHH
Confidence 988876555 99999998 245678999999999999988986 57887655333
No 46
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=99.00 E-value=4.5e-09 Score=97.75 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=81.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh----hhhh---cc---cCCccceEeec
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM----EIED---CI---FPLLVDVSVHE 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~----dl~~---~~---~~~~~~i~~~~ 75 (329)
.||+|||+ |.||+.+|..++..|+ +|+++|++ .+.++.... .+.. .. .....+++.++
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~-------~V~l~D~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~ 75 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGL-------DVVAWDPA----PGAEAALRANVANAWPALERQGLAPGASPARLRFVA 75 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecC
Confidence 78999999 9999999999999998 99999998 333321111 1110 00 01124667777
Q ss_pred CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHH
Q psy9582 76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMK 145 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~ 145 (329)
++.+++++||+|+.+. .+|.++.+++...+.++++|++ |+.||.+.+...-+..
T Consensus 76 ~l~~av~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~la~ 129 (321)
T PRK07066 76 TIEACVADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDFYA 129 (321)
T ss_pred CHHHHhcCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHHHH
Confidence 8778999999999972 3556788889999999997787 5788888765544443
No 47
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.94 E-value=6.2e-09 Score=95.77 Aligned_cols=111 Identities=17% Similarity=0.186 Sum_probs=79.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-------hhhcc-c------C
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-------IEDCI-F------P 66 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-------l~~~~-~------~ 66 (329)
||....||+|||+ |.+|..+|..++..|+ +|+++|++ .+.++..... +.+.. . .
T Consensus 1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~-------~V~l~d~~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~ 68 (286)
T PRK07819 1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGV-------DVLVFETT----EELATAGRNRIEKSLERAVSRGKLTERERDA 68 (286)
T ss_pred CCCCccEEEEEcc-cHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHHHHHHHHHHHhcccCChhhHHH
Confidence 5666579999999 9999999999999998 99999999 4443321111 11110 0 0
Q ss_pred CccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcCchhhHH
Q psy9582 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA-SRDVKVLVVGNPVNTNT 140 (329)
Q Consensus 67 ~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tNP~~~~~ 140 (329)
...+++.+++. +++++||+||.+ +.++.++.+.+...++++| +|++++ +||...+..
T Consensus 69 ~~~~l~~~~~~-~~~~~~d~ViEa--------------v~E~~~~K~~l~~~l~~~~~~~~~il--~snTS~~~~ 126 (286)
T PRK07819 69 ALARLRFTTDL-GDFADRQLVIEA--------------VVEDEAVKTEIFAELDKVVTDPDAVL--ASNTSSIPI 126 (286)
T ss_pred HHhCeEeeCCH-HHhCCCCEEEEe--------------cccCHHHHHHHHHHHHHhhCCCCcEE--EECCCCCCH
Confidence 12467777776 789999999998 3456688888889999998 688764 666555433
No 48
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.88 E-value=1.8e-08 Score=92.45 Aligned_cols=144 Identities=16% Similarity=0.195 Sum_probs=98.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh----Hhhhhhcc-----c-----CCccce
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV----IMEIEDCI-----F-----PLLVDV 71 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~----~~dl~~~~-----~-----~~~~~i 71 (329)
+||+|||| |.||+.+|..++..|+ +|+|+|++ ++.++.. ...+.... . ..+..+
T Consensus 4 ~kv~ViGa-G~MG~gIA~~~A~~G~-------~V~l~D~~----~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i 71 (307)
T COG1250 4 KKVAVIGA-GVMGAGIAAVFALAGY-------DVVLKDIS----PEALERALAYIEKNLEKLVEKGKLTEEEADAALARI 71 (307)
T ss_pred cEEEEEcc-cchhHHHHHHHhhcCC-------ceEEEeCC----HHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhc
Confidence 68999999 9999999999999777 89999999 3333211 11111100 0 112466
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHC--C-
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSA--P- 148 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~--~- 148 (329)
+.+++ ++++++||+||.+ ..+|.++.+++..++.++++|+++ +.||.+.+.-..+.+.+ |
T Consensus 72 ~~~~~-~~~l~~~DlVIEA--------------v~E~levK~~vf~~l~~~~~~~aI--lASNTSsl~it~ia~~~~rpe 134 (307)
T COG1250 72 TPTTD-LAALKDADLVIEA--------------VVEDLELKKQVFAELEALAKPDAI--LASNTSSLSITELAEALKRPE 134 (307)
T ss_pred cccCc-hhHhccCCEEEEe--------------ccccHHHHHHHHHHHHhhcCCCcE--EeeccCCCCHHHHHHHhCCch
Confidence 66666 4599999999998 467889999999999999988986 69998875433333332 1
Q ss_pred ------CCCC-C--c---EEE--echhHHHHHHHHHHHHhCCCC
Q psy9582 149 ------DLSY-K--N---FTA--MLRLDHNRAIAKLASKLNEPV 178 (329)
Q Consensus 149 ------~~~~-~--~---i~~--~t~lds~r~~~~la~~l~~~~ 178 (329)
-|+| . + ++. -|.-++......++++++..|
T Consensus 135 r~iG~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~ 178 (307)
T COG1250 135 RFIGLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTP 178 (307)
T ss_pred hEEEEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCC
Confidence 1222 1 1 222 256677777788888888554
No 49
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.88 E-value=4.9e-09 Score=87.82 Aligned_cols=111 Identities=16% Similarity=0.196 Sum_probs=78.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc---C---CccceEeecCcccc
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF---P---LLVDVSVHENPITA 80 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~---~~~~i~~~~~~~~a 80 (329)
||+|+|| |++|.++|..|..++. +|.||+++ ++.++.+.. .+... + ...++.+++|+.++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~-------~V~l~~~~----~~~~~~i~~--~~~n~~~~~~~~l~~~i~~t~dl~~a 66 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH-------EVTLWGRD----EEQIEEINE--TRQNPKYLPGIKLPENIKATTDLEEA 66 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE-------EEEEETSC----HHHHHHHHH--HTSETTTSTTSBEETTEEEESSHHHH
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-------EEEEEecc----HHHHHHHHH--hCCCCCCCCCcccCcccccccCHHHH
Confidence 8999999 9999999999999997 99999998 443432221 12111 1 12578899999999
Q ss_pred cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----CchhhHHHHHHHHC
Q psy9582 81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----NPVNTNTYITMKSA 147 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----NP~~~~~~~~~~~~ 147 (329)
+++||+||++ +|. ...+++++++..+.+++..+++++ +....+..++.+..
T Consensus 67 ~~~ad~Iiia--vPs--------------~~~~~~~~~l~~~l~~~~~ii~~~KG~~~~~~~~~~~~i~~~~ 122 (157)
T PF01210_consen 67 LEDADIIIIA--VPS--------------QAHREVLEQLAPYLKKGQIIISATKGFEPGTLLLLSEVIEEIL 122 (157)
T ss_dssp HTT-SEEEE---S-G--------------GGHHHHHHHHTTTSHTT-EEEETS-SEETTEEEEHHHHHHHHH
T ss_pred hCcccEEEec--ccH--------------HHHHHHHHHHhhccCCCCEEEEecCCcccCCCccHHHHHHHHh
Confidence 9999999997 232 467888999999875666776665 23456777776665
No 50
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.86 E-value=8.6e-09 Score=88.66 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=77.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--------C--ccceEeec
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--------L--LVDVSVHE 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--------~--~~~i~~~~ 75 (329)
|||+|+|. |++|..+|..|+..|+ +|.-+|++ +++.+.+.....+...+ . ..+++.++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~-------~V~g~D~~----~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~ 68 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH-------QVIGVDID----EEKVEALNNGELPIYEPGLDELLKENVSAGRLRATT 68 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS-------EEEEE-S-----HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEES
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC-------EEEEEeCC----hHHHHHHhhccccccccchhhhhccccccccchhhh
Confidence 68999998 9999999999999998 99999999 55444322111111001 0 14788988
Q ss_pred CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHH----HHHHHHC
Q psy9582 76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNT----YITMKSA 147 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~----~~~~~~~ 147 (329)
+..+++++||++|++.++|.+.+.+ -+...+.+.++.|.++.+++.+|++-| =|.+..- +++.+.+
T Consensus 69 ~~~~ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~ 139 (185)
T PF03721_consen 69 DIEEAIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRS 139 (185)
T ss_dssp EHHHHHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHC
T ss_pred hhhhhhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhc
Confidence 8888899999999998888755422 233566677777777766666766665 4665444 5555555
No 51
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.85 E-value=3.4e-08 Score=90.84 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=86.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC------ccceEeecCccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL------LVDVSVHENPIT 79 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~------~~~i~~~~~~~~ 79 (329)
+||+|+|| |++|+++|..|..++. +|+||.++ ++..+.+-.+ +....+ ..++..++|+.+
T Consensus 2 ~kI~ViGa-GswGTALA~~la~ng~-------~V~lw~r~----~~~~~~i~~~--~~N~~yLp~i~lp~~l~at~Dl~~ 67 (329)
T COG0240 2 MKIAVIGA-GSWGTALAKVLARNGH-------EVRLWGRD----EEIVAEINET--RENPKYLPGILLPPNLKATTDLAE 67 (329)
T ss_pred ceEEEEcC-ChHHHHHHHHHHhcCC-------eeEEEecC----HHHHHHHHhc--CcCccccCCccCCcccccccCHHH
Confidence 68999999 9999999999999986 89999999 4433322111 222222 257888999999
Q ss_pred ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----CchhhHHHHHHHHCC
Q psy9582 80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----NPVNTNTYITMKSAP 148 (329)
Q Consensus 80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----NP~~~~~~~~~~~~~ 148 (329)
++++||+|++. +|. +.+++++++++.+..+++.++.+| ++...++.++.+..|
T Consensus 68 a~~~ad~iv~a--vPs--------------~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~l~ 125 (329)
T COG0240 68 ALDGADIIVIA--VPS--------------QALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEELP 125 (329)
T ss_pred HHhcCCEEEEE--CCh--------------HHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHHcC
Confidence 99999999997 333 578888888876666788888887 456688888888763
No 52
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.83 E-value=3.6e-08 Score=92.09 Aligned_cols=121 Identities=14% Similarity=0.168 Sum_probs=86.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh--------hhhhcccCC--ccceEeec
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM--------EIEDCIFPL--LVDVSVHE 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~--------dl~~~~~~~--~~~i~~~~ 75 (329)
|||+|+|. |.||...+..|++.|+ +|+++|++ +++.+.+.. .|++..... ..++++|+
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH-------eVv~vDid----~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTt 68 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH-------EVVCVDID----ESKVELLNKGISPIYEPGLEELLKENLASGRLRFTT 68 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEc
Confidence 68999998 9999999999999987 99999999 555543211 001000001 13599999
Q ss_pred CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhHHHHHH
Q psy9582 76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTNTYITM 144 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~~~~~~ 144 (329)
|..+|++++|++|++.|+|.++.. ..+...+...++.|.++.+..++|++- |=|+.....+-.
T Consensus 69 d~~~a~~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~~ 132 (414)
T COG1004 69 DYEEAVKDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVRA 132 (414)
T ss_pred CHHHHHhcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHHH
Confidence 999999999999999999987633 245578888888888886333555554 458765554433
No 53
>KOG2304|consensus
Probab=98.81 E-value=2.9e-09 Score=91.76 Aligned_cols=117 Identities=24% Similarity=0.254 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc------C---------C
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF------P---------L 67 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~------~---------~ 67 (329)
.+.+.|+|+|| |.+|+.+|+..+..|+ .|+|+|.+++.-.+..+++...+.+.+. + .
T Consensus 9 ~~~~~V~ivGa-G~MGSGIAQv~a~sg~-------~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~ 80 (298)
T KOG2304|consen 9 AEIKNVAIVGA-GQMGSGIAQVAATSGL-------NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDT 80 (298)
T ss_pred ccccceEEEcc-cccchhHHHHHHhcCC-------ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHH
Confidence 34578999999 9999999999999998 8999999942211112233333332210 1 1
Q ss_pred ccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh-HHHHH
Q psy9582 68 LVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT-NTYIT 143 (329)
Q Consensus 68 ~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~-~~~~~ 143 (329)
+..++.+++...++.+||+||.+ +.+|.++.+.+.+.+.+.|+++++ ..||...+ ++.++
T Consensus 81 l~ri~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~i--l~tNTSSl~lt~ia 141 (298)
T KOG2304|consen 81 LDRIKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSSTI--LATNTSSLSLTDIA 141 (298)
T ss_pred HHHHHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccceE--EeecccceeHHHHH
Confidence 24677788888999999998876 679999999999999999977775 68898764 44443
No 54
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.77 E-value=4.6e-08 Score=90.09 Aligned_cols=106 Identities=21% Similarity=0.238 Sum_probs=73.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh---hc---ccC---------Ccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE---DC---IFP---------LLV 69 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~---~~---~~~---------~~~ 69 (329)
.+||+|||+ |.+|+.+|..++..|. +|+++|++ .+.++.....++ +. ... ...
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGF-------DVTIYDIS----DEALEKAKERIAKLADRYVRDLEATKEAPAEAALN 70 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHc
Confidence 368999999 9999999999999887 89999998 443332211110 00 000 124
Q ss_pred ceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582 70 DVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT 138 (329)
Q Consensus 70 ~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~ 138 (329)
+++.+++..+++++||+||.+. ..+.+..+++.+++.++++++++| ++|....
T Consensus 71 ~i~~~~d~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~sntSt~ 123 (287)
T PRK08293 71 RITLTTDLAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKTIF--ATNSSTL 123 (287)
T ss_pred CeEEeCCHHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCCEE--EECcccC
Confidence 6777888777899999999983 234567788888888888667653 5565554
No 55
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.73 E-value=6.3e-08 Score=89.37 Aligned_cols=107 Identities=17% Similarity=0.212 Sum_probs=70.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh----h----cccC------
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE----D----CIFP------ 66 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~----~----~~~~------ 66 (329)
||. .+||+|||+ |.+|..+|..|+..|. +|++||++ .+.++.....+. . ...+
T Consensus 1 ~~~-~~kI~vIGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~ 67 (292)
T PRK07530 1 MMA-IKKVGVIGA-GQMGNGIAHVCALAGY-------DVLLNDVS----ADRLEAGLATINGNLARQVAKGKISEEARAA 67 (292)
T ss_pred CCC-CCEEEEECC-cHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 454 478999999 9999999999999987 89999998 444432211111 0 0000
Q ss_pred CccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 67 ~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
...+++.+++. +++++||+||.+. |. +....+.+.+.+.++++++++++ ||.+.
T Consensus 68 ~~~~i~~~~~~-~~~~~aD~Vieav--pe------------~~~~k~~~~~~l~~~~~~~~ii~--s~ts~ 121 (292)
T PRK07530 68 ALARISTATDL-EDLADCDLVIEAA--TE------------DETVKRKIFAQLCPVLKPEAILA--TNTSS 121 (292)
T ss_pred HHhCeEeeCCH-HHhcCCCEEEEcC--cC------------CHHHHHHHHHHHHhhCCCCcEEE--EcCCC
Confidence 11346676664 6799999999983 21 22455566677888887787654 45443
No 56
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.71 E-value=1.3e-07 Score=97.42 Aligned_cols=145 Identities=14% Similarity=0.149 Sum_probs=97.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---H-hhhh---hcc--c-----CCccce
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---I-MEIE---DCI--F-----PLLVDV 71 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~-~dl~---~~~--~-----~~~~~i 71 (329)
.||+|||| |.+|..+|..++..|+ +|+|+|++ .+.++.- . ..+. ... . ....++
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i 381 (715)
T PRK11730 314 KQAAVLGA-GIMGGGIAYQSASKGV-------PVIMKDIN----QKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSI 381 (715)
T ss_pred ceEEEECC-chhHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCe
Confidence 58999999 9999999999999998 89999999 4433211 1 1111 100 0 112578
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCC
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLS 151 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~ 151 (329)
+.+++. +++++||+||.+ ..++.++.+++..+++++|+|+++ +.||.+.+-...+.+.. ..
T Consensus 382 ~~~~~~-~~~~~aDlViEa--------------v~E~l~~K~~vf~~l~~~~~~~~i--lasNTSsl~i~~la~~~-~~- 442 (715)
T PRK11730 382 RPTLDY-AGFERVDVVVEA--------------VVENPKVKAAVLAEVEQKVREDTI--LASNTSTISISLLAKAL-KR- 442 (715)
T ss_pred EEeCCH-HHhcCCCEEEec--------------ccCcHHHHHHHHHHHHhhCCCCcE--EEEcCCCCCHHHHHhhc-CC-
Confidence 888775 789999999998 356778999999999999988876 58998775433333332 11
Q ss_pred CCcEEE-------------------echhHHHHHHHHHHHHhCCCCCCe
Q psy9582 152 YKNFTA-------------------MLRLDHNRAIAKLASKLNEPVSSI 181 (329)
Q Consensus 152 ~~~i~~-------------------~t~lds~r~~~~la~~l~~~~~~v 181 (329)
|.|++| .|.-++.-....+++.+|..|--+
T Consensus 443 p~r~~g~Hff~P~~~~~lVEvv~g~~T~~~~~~~~~~~~~~lgk~pv~v 491 (715)
T PRK11730 443 PENFCGMHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTPIVV 491 (715)
T ss_pred CccEEEEecCCcccccceEEeeCCCCCCHHHHHHHHHHHHHhCCceEEe
Confidence 122222 245555445556677788665443
No 57
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.69 E-value=9.5e-08 Score=87.73 Aligned_cols=112 Identities=17% Similarity=0.188 Sum_probs=75.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-h--H----hhhhhcc-c------CCccce
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-V--I----MEIEDCI-F------PLLVDV 71 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-~--~----~dl~~~~-~------~~~~~i 71 (329)
.||+|||+ |.+|..++..++..|+ +|+++|++ .++++. . . ..+.+.. . ....++
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~-------~V~~~d~~----~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l 71 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGY-------DVVMVDIS----DAAVDRGLATITKSLDRLVKKGKMTEADKEAALARI 71 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCC-------ceEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 58999999 9999999999999987 89999998 444421 0 0 0111110 0 011356
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHH
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKS 146 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~ 146 (329)
+.+++. +++++||+||++. ..+....+++.+.+.++++|++++ .||-..+-...+.+.
T Consensus 72 ~~~~~~-~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~la~~ 129 (282)
T PRK05808 72 TGTTDL-DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITELAAA 129 (282)
T ss_pred EEeCCH-HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHHHh
Confidence 777764 6789999999983 334466778888899988778765 666655444444443
No 58
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.69 E-value=1.7e-07 Score=96.53 Aligned_cols=147 Identities=13% Similarity=0.118 Sum_probs=97.9
Q ss_pred CEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccccchhh---hHhhhhhc----c--c-----CCccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEIEDC----I--F-----PLLVD 70 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl~~~----~--~-----~~~~~ 70 (329)
.||+|||| |.+|..+|..++ ..|+ +|+|+|.+ .+.++. ...+..+. . . ....+
T Consensus 310 ~~v~ViGa-G~mG~giA~~~a~~~G~-------~V~l~d~~----~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (708)
T PRK11154 310 NKVGVLGG-GLMGGGIAYVTATKAGL-------PVRIKDIN----PQGINHALKYSWDLLDKKVKRRHLKPSERDKQMAL 377 (708)
T ss_pred cEEEEECC-chhhHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhc
Confidence 68999999 999999999999 7788 99999998 333322 11111100 0 0 11257
Q ss_pred eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC--
Q psy9582 71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP-- 148 (329)
Q Consensus 71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~-- 148 (329)
++.+++. +++++||+||.+ ..+|.++.+++..+++++|+|+++ +.||...+...-+.+...
T Consensus 378 i~~~~~~-~~~~~aDlViEa--------------v~E~~~~K~~v~~~le~~~~~~~i--lasnTS~l~i~~la~~~~~p 440 (708)
T PRK11154 378 ISGTTDY-RGFKHADVVIEA--------------VFEDLALKQQMVAEVEQNCAPHTI--FASNTSSLPIGQIAAAAARP 440 (708)
T ss_pred EEEeCCh-HHhccCCEEeec--------------ccccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHHHhcCcc
Confidence 8888875 789999999998 356789999999999999988986 578877653333333321
Q ss_pred -------CCC-CC--c---EEE--echhHHHHHHHHHHHHhCCCCCCe
Q psy9582 149 -------DLS-YK--N---FTA--MLRLDHNRAIAKLASKLNEPVSSI 181 (329)
Q Consensus 149 -------~~~-~~--~---i~~--~t~lds~r~~~~la~~l~~~~~~v 181 (329)
-|+ +. + |+. .|.-++.-....+++.+|..|--+
T Consensus 441 ~r~ig~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~pv~v 488 (708)
T PRK11154 441 EQVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVV 488 (708)
T ss_pred cceEEEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 111 11 1 222 255555555566777778665433
No 59
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.69 E-value=7.5e-08 Score=98.95 Aligned_cols=147 Identities=12% Similarity=0.126 Sum_probs=97.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh---hHhhh-h---hcc--c-----CCccce
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG---VIMEI-E---DCI--F-----PLLVDV 71 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~---~~~dl-~---~~~--~-----~~~~~i 71 (329)
.||+|||| |.+|..+|..++..|+ +|+|+|++ .+.++. ...+. . +.. . ....++
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 381 (714)
T TIGR02437 314 KQAAVLGA-GIMGGGIAYQSASKGT-------PIVMKDIN----QHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGI 381 (714)
T ss_pred ceEEEECC-chHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCe
Confidence 68999999 9999999999999998 99999999 333321 11111 0 000 0 112478
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC---
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP--- 148 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~--- 148 (329)
+.+++. +++++||+||.+ ..++.++.+++..++.++|+|+++ +.||.+.+-..-+...++
T Consensus 382 ~~~~~~-~~~~~aDlViEa--------------v~E~l~~K~~vf~~l~~~~~~~~i--lasnTS~l~i~~ia~~~~~p~ 444 (714)
T TIGR02437 382 TPTLSY-AGFDNVDIVVEA--------------VVENPKVKAAVLAEVEQHVREDAI--LASNTSTISISLLAKALKRPE 444 (714)
T ss_pred EEeCCH-HHhcCCCEEEEc--------------CcccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHHhhcCCcc
Confidence 888774 789999999998 356778999999999999988876 689987754333333321
Q ss_pred ------CCCC-Cc-----EEE--echhHHHHHHHHHHHHhCCCCCCe
Q psy9582 149 ------DLSY-KN-----FTA--MLRLDHNRAIAKLASKLNEPVSSI 181 (329)
Q Consensus 149 ------~~~~-~~-----i~~--~t~lds~r~~~~la~~l~~~~~~v 181 (329)
-|+| .. |+. .|.-++......+++.+|..|--+
T Consensus 445 r~ig~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v 491 (714)
T TIGR02437 445 NFCGMHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTPIVV 491 (714)
T ss_pred cEEEEecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1111 11 222 245555555566677777554433
No 60
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.68 E-value=1.6e-07 Score=87.35 Aligned_cols=108 Identities=18% Similarity=0.196 Sum_probs=70.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc---c------CCccceE
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI---F------PLLVDVS 72 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~---~------~~~~~i~ 72 (329)
|++.+||+|||+ |.+|.+++..|+..|+ +|+++|++ .+.++.....+.... . ....+++
T Consensus 1 ~~~~~~I~vIGa-G~mG~~iA~~l~~~g~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 68 (311)
T PRK06130 1 MNPIQNLAIIGA-GTMGSGIAALFARKGL-------QVVLIDVM----EGALERARGVIERALGVYAPLGIASAGMGRIR 68 (311)
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC----HHHHHHHHHHHHHHHHHhhhcccHHHHhhceE
Confidence 666689999999 9999999999999887 89999998 444432221111100 0 0113456
Q ss_pred eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
.+++..+++++||+||++. | ........+...+..+++++++| +||...
T Consensus 69 ~~~~~~~~~~~aDlVi~av--~------------~~~~~~~~v~~~l~~~~~~~~ii--~s~tsg 117 (311)
T PRK06130 69 MEAGLAAAVSGADLVIEAV--P------------EKLELKRDVFARLDGLCDPDTIF--ATNTSG 117 (311)
T ss_pred EeCCHHHHhccCCEEEEec--c------------CcHHHHHHHHHHHHHhCCCCcEE--EECCCC
Confidence 6677667899999999983 1 12234555666677776566654 355444
No 61
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.66 E-value=2.2e-07 Score=95.50 Aligned_cols=147 Identities=12% Similarity=0.110 Sum_probs=95.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhH----hhhhhc---c--c-----CCccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVI----MEIEDC---I--F-----PLLVD 70 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~----~dl~~~---~--~-----~~~~~ 70 (329)
.||+|||| |.+|+.+|..++. .|+ +|+|+|.+ .+.++.-. ..+... . . ....+
T Consensus 305 ~~v~ViGa-G~mG~~iA~~~a~~~G~-------~V~l~d~~----~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 372 (699)
T TIGR02440 305 KKVGILGG-GLMGGGIASVTATKAGI-------PVRIKDIN----PQGINNALKYAWKLLDKGVKRRHMTPAERDNQMAL 372 (699)
T ss_pred cEEEEECC-cHHHHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcC
Confidence 68999999 9999999999984 788 99999999 33332211 111110 0 0 01257
Q ss_pred eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC--
Q psy9582 71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP-- 148 (329)
Q Consensus 71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~-- 148 (329)
++.+++. +++++||+||.+ ..++.++.+++..++.++|+|+++ +.||.+.+...-+.....
T Consensus 373 i~~~~~~-~~~~~adlViEa--------------v~E~l~~K~~v~~~l~~~~~~~~i--lasnTS~l~i~~la~~~~~p 435 (699)
T TIGR02440 373 ITGTTDY-RGFKDVDIVIEA--------------VFEDLALKHQMVKDIEQECAAHTI--FASNTSSLPIGQIAAAASRP 435 (699)
T ss_pred eEEeCCh-HHhccCCEEEEe--------------ccccHHHHHHHHHHHHhhCCCCcE--EEeCCCCCCHHHHHHhcCCc
Confidence 8888875 789999999998 356778999999999999988876 588887753333333321
Q ss_pred -------CC-CCC--c---EEE--echhHHHHHHHHHHHHhCCCCCCe
Q psy9582 149 -------DL-SYK--N---FTA--MLRLDHNRAIAKLASKLNEPVSSI 181 (329)
Q Consensus 149 -------~~-~~~--~---i~~--~t~lds~r~~~~la~~l~~~~~~v 181 (329)
-+ |+. + |+. .|.-++.-....+.+.+|..|--+
T Consensus 436 ~r~~g~HffnP~~~~~lVEvv~g~~T~~~~~~~~~~~~~~~gk~pv~v 483 (699)
T TIGR02440 436 ENVIGLHYFSPVEKMPLVEVIPHAGTSEQTIATTVALAKKQGKTPIVV 483 (699)
T ss_pred ccEEEEecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 11 111 1 222 255555444556677777655433
No 62
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.66 E-value=1.6e-07 Score=96.81 Aligned_cols=144 Identities=15% Similarity=0.132 Sum_probs=96.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---Hhh-hhhc---c--c-----CCccce
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---IME-IEDC---I--F-----PLLVDV 71 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~~d-l~~~---~--~-----~~~~~i 71 (329)
.||+|||| |.+|+.+|..++..|+ +|+|+|++ .+.++.- ..+ +... . . ....++
T Consensus 336 ~~v~ViGa-G~MG~gIA~~~a~~G~-------~V~l~d~~----~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i 403 (737)
T TIGR02441 336 KTLAVLGA-GLMGAGIAQVSVDKGL-------KTVLKDAT----PAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNL 403 (737)
T ss_pred cEEEEECC-CHhHHHHHHHHHhCCC-------cEEEecCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 68999999 9999999999999998 89999999 3333321 111 1100 0 0 012578
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCC---
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP--- 148 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~--- 148 (329)
+.+++. +++++||+||.+ ..+|.++.+++...+.++|+|+++ +.||.+.+-..-+...++
T Consensus 404 ~~~~~~-~~~~~aDlViEA--------------v~E~l~~K~~vf~~l~~~~~~~~i--lasNTSsl~i~~la~~~~~p~ 466 (737)
T TIGR02441 404 TPTLDY-SGFKNADMVIEA--------------VFEDLSLKHKVIKEVEAVVPPHCI--IASNTSALPIKDIAAVSSRPE 466 (737)
T ss_pred EEeCCH-HHhccCCeehhh--------------ccccHHHHHHHHHHHHhhCCCCcE--EEEcCCCCCHHHHHhhcCCcc
Confidence 888774 789999999987 356789999999999999988876 588887753333333321
Q ss_pred ------CCCC-C--c---EEE--echhHHHHHHHHHHHHhCCCC
Q psy9582 149 ------DLSY-K--N---FTA--MLRLDHNRAIAKLASKLNEPV 178 (329)
Q Consensus 149 ------~~~~-~--~---i~~--~t~lds~r~~~~la~~l~~~~ 178 (329)
-|+| . + |+. .|.-++.-....+++.+|..|
T Consensus 467 r~ig~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~p 510 (737)
T TIGR02441 467 KVIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVV 510 (737)
T ss_pred ceEEEeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeE
Confidence 1111 1 1 222 255555555666778888554
No 63
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.60 E-value=2.7e-07 Score=85.09 Aligned_cols=105 Identities=12% Similarity=0.149 Sum_probs=70.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-------hh---hccc-------CCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-------IE---DCIF-------PLL 68 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-------l~---~~~~-------~~~ 68 (329)
.||+|||+ |.+|..+|..++..|. +|+++|++ .+.++..... +. +... ...
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~ 71 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY-------DVTIVDVS----EEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIM 71 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHH
Confidence 68999999 9999999999999987 89999999 4444321111 11 0000 011
Q ss_pred cceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 69 VDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 69 ~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
.++..+++. +++++||+||.+. ..+.+..+++.+.+.+++++++++ +||...+.
T Consensus 72 ~~i~~~~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~ 125 (291)
T PRK06035 72 ARIRTSTSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIM 125 (291)
T ss_pred hCcEeeCCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCC
Confidence 345566665 6899999999983 123356677778888888777765 45554433
No 64
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.60 E-value=3e-07 Score=84.99 Aligned_cols=108 Identities=16% Similarity=0.185 Sum_probs=69.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh-------hhhhcc--c-----CC
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM-------EIEDCI--F-----PL 67 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~-------dl~~~~--~-----~~ 67 (329)
|++..||+|||+ |.+|..+|..|+..|. +|+++|.+ .++++.... .+.+.. . ..
T Consensus 1 ~~~~~~V~vIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 68 (295)
T PLN02545 1 MAEIKKVGVVGA-GQMGSGIAQLAAAAGM-------DVWLLDSD----PAALSRGLDSISSSLARLVKKGKMSQEEADAT 68 (295)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 444578999999 9999999999999887 89999998 433321110 111110 0 00
Q ss_pred ccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582 68 LVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT 138 (329)
Q Consensus 68 ~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~ 138 (329)
...+..+++ .+++++||+||.+. .++....+.+...+.++++|+++| +||-..+
T Consensus 69 ~~~~~~~~~-~~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i 122 (295)
T PLN02545 69 LGRIRCTTN-LEELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAIL--ASNTSSI 122 (295)
T ss_pred HhceEeeCC-HHHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcEE--EECCCCC
Confidence 123455555 47899999999982 233356666677777777677754 3554443
No 65
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.59 E-value=2.7e-07 Score=85.04 Aligned_cols=98 Identities=17% Similarity=0.190 Sum_probs=67.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh---hcc--c---------CCccce
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE---DCI--F---------PLLVDV 71 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~---~~~--~---------~~~~~i 71 (329)
.||+|||+ |.+|..+|..|+..|. +|+++|++ ++.++.....+. ... . ....++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 69 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF-------QTTLVDIK----QEQLESAQQEIASIFEQGVARGKLTEAARQAALARL 69 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC-------cEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 47999999 9999999999999887 89999999 444443211111 000 0 011346
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEE
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKV 129 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~v 129 (329)
+.+++..+++++||+||.+.. .+..+.+.+...+.++++|++++
T Consensus 70 ~~~~~~~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~il 113 (288)
T PRK09260 70 SYSLDLKAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECYI 113 (288)
T ss_pred EEeCcHHHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcEE
Confidence 777777789999999999832 22345556666777887677754
No 66
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.58 E-value=2.8e-07 Score=91.20 Aligned_cols=105 Identities=16% Similarity=0.164 Sum_probs=72.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh---Hhh-h---hhcc-------cCCcc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV---IME-I---EDCI-------FPLLV 69 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~---~~d-l---~~~~-------~~~~~ 69 (329)
.-.||+|||+ |.+|+.+|..++..|+ +|+++|++ .+.++.. ..+ + .+.. ...+.
T Consensus 6 ~i~~V~VIGa-G~MG~gIA~~la~aG~-------~V~l~D~~----~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~ 73 (507)
T PRK08268 6 SIATVAVIGA-GAMGAGIAQVAAQAGH-------TVLLYDAR----AGAAAAARDGIAARLAKLVEKGKLTAEQADAALA 73 (507)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHh
Confidence 4579999999 9999999999999998 99999999 4444321 111 1 0000 00124
Q ss_pred ceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 70 DVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 70 ~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
+++.+++. +++++||+||.+ +.++..+.+.+...+.+.+++++++ +||...
T Consensus 74 ~i~~~~~~-~~~~~aDlViEa--------------v~E~~~vK~~vf~~l~~~~~~~ail--asntSt 124 (507)
T PRK08268 74 RLRPVEAL-ADLADCDLVVEA--------------IVERLDVKQALFAQLEAIVSPDCIL--ATNTSS 124 (507)
T ss_pred CeEEeCCH-HHhCCCCEEEEc--------------CcccHHHHHHHHHHHHhhCCCCcEE--EECCCC
Confidence 57777765 678999999997 2345567777777889888778764 455443
No 67
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.56 E-value=4.5e-07 Score=89.72 Aligned_cols=109 Identities=10% Similarity=-0.015 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-------hhhcc-cC--CccceE
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-------IEDCI-FP--LLVDVS 72 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-------l~~~~-~~--~~~~i~ 72 (329)
...+||+|||+ |.||+++|..|+..|+ +|+++|++ .++++..... +.... .+ ...+++
T Consensus 2 ~~i~kIavIG~-G~MG~~iA~~la~~G~-------~V~v~D~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~ 69 (495)
T PRK07531 2 TMIMKAACIGG-GVIGGGWAARFLLAGI-------DVAVFDPH----PEAERIIGEVLANAERAYAMLTDAPLPPEGRLT 69 (495)
T ss_pred CCcCEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHhhhccchhhhhhceE
Confidence 33468999998 9999999999999998 89999998 4444321110 00000 00 112467
Q ss_pred eecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 73 VHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 73 ~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
.++++.+++++||+|+.+. ..+.++.+.+...+.++++|+++ +.||..++.
T Consensus 70 ~~~~~~ea~~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~i--I~SsTsgi~ 120 (495)
T PRK07531 70 FCASLAEAVAGADWIQESV--------------PERLDLKRRVLAEIDAAARPDAL--IGSSTSGFL 120 (495)
T ss_pred eeCCHHHHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcE--EEEcCCCCC
Confidence 7778778999999999872 22334556666677788766653 466655543
No 68
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.54 E-value=6.8e-07 Score=79.04 Aligned_cols=104 Identities=14% Similarity=0.177 Sum_probs=67.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccccCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITAFKD 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~al~~ 83 (329)
|||+|||++|.+|++++..|.+.+. +|.++|++ .++++....+..+... +...++.. ++..+++++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~-------~V~v~~r~----~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~ 68 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN-------KIIIGSRD----LEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKR 68 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-------EEEEEEcC----HHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhc
Confidence 5899998449999999999999886 89999998 5555544433322110 11112232 244678999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT 138 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~ 138 (329)
+|+||++... ..+.++++.+.... ++.+||-++||...
T Consensus 69 aDvVilavp~----------------~~~~~~l~~l~~~l-~~~vvI~~~ngi~~ 106 (219)
T TIGR01915 69 ADVVILAVPW----------------DHVLKTLESLRDEL-SGKLVISPVVPLAS 106 (219)
T ss_pred CCEEEEECCH----------------HHHHHHHHHHHHhc-cCCEEEEeccCcee
Confidence 9999998321 23444455555543 34678889999753
No 69
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.53 E-value=4e-07 Score=89.94 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh-------hhhhcc-c------CCccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM-------EIEDCI-F------PLLVD 70 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~-------dl~~~~-~------~~~~~ 70 (329)
..||+|||+ |.||+.+|..++..|+ +|++||++ .+.++.... .+.... . ..+.+
T Consensus 5 ~~kV~VIGa-G~MG~gIA~~la~aG~-------~V~l~d~~----~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~ 72 (503)
T TIGR02279 5 VVTVAVIGA-GAMGAGIAQVAASAGH-------QVLLYDIR----AEALARAIAGIEARLNSLVTKGKLTAEECERTLKR 72 (503)
T ss_pred ccEEEEECc-CHHHHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhc
Confidence 468999999 9999999999999998 89999999 444432111 111110 0 01246
Q ss_pred eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh
Q psy9582 71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT 138 (329)
Q Consensus 71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~ 138 (329)
++.+++. +++++||+||.+ +.++..+.+.+...+.++|+|+++ +.||.+.+
T Consensus 73 i~~~~~~-~~l~~aDlVIEa--------------v~E~~~vK~~vf~~l~~~~~~~~I--lasnTStl 123 (503)
T TIGR02279 73 LIPVTDL-HALADAGLVIEA--------------IVENLEVKKALFAQLEELCPADTI--IASNTSSL 123 (503)
T ss_pred cEEeCCH-HHhCCCCEEEEc--------------CcCcHHHHHHHHHHHHhhCCCCeE--EEECCCCC
Confidence 7777775 678999999998 234557777888889999877765 57776654
No 70
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.48 E-value=3.4e-07 Score=83.48 Aligned_cols=122 Identities=18% Similarity=0.184 Sum_probs=80.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-c--------CCccceEeecCcc
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-F--------PLLVDVSVHENPI 78 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~--------~~~~~i~~~~~~~ 78 (329)
|.|+||+|++|+.++..|+..+.. +|+++|++ +..+.....++.... . +.+.+++-...+.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~------~lil~d~~----E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~ 70 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPK------KLILFDRD----ENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLN 70 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-S------EEEEEES-----HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCC------eEEEeCCC----hhHHHHHHHHHhhcccccCcccccCceeecccCHHHHH
Confidence 689999999999999999987642 89999999 677776777774211 0 1123333333445
Q ss_pred cccC--CccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc----CchhhHH
Q psy9582 79 TAFK--DANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG----NPVNTNT 140 (329)
Q Consensus 79 ~al~--~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t----NP~~~~~ 140 (329)
++++ +.|+|+++|....-|- ....+.+..|+-..+++++...++. .+.+|.+.| ||+++|.
T Consensus 71 ~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv~PtnvmG 139 (293)
T PF02719_consen 71 RIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAVNPTNVMG 139 (293)
T ss_dssp HHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCSS--SHHH
T ss_pred HHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccCCCCcHHH
Confidence 6677 9999999987654332 2466778999999999999999985 776666665 7888764
No 71
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=98.42 E-value=1.7e-06 Score=81.43 Aligned_cols=122 Identities=13% Similarity=0.161 Sum_probs=79.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCC-CceEEEEecCCcc-cccchhhhHhhhhhcccCC------ccceEeecCcc
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQ-PIILQLLEASNKK-SQKAIKGVIMEIEDCIFPL------LVDVSVHENPI 78 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~-~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~~~~------~~~i~~~~~~~ 78 (329)
||+|||+ |++|.++|..|..++....+. ..+|.||.+++.- .++..+ ..+-.+....+ ..++++++|+.
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~--~in~~~~n~~ylpgi~Lp~~i~at~dl~ 77 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTE--IINTTHENVKYLPGIKLPANLVAVPDLV 77 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHH--HHHhcCCCccccCCCcCCCCeEEECCHH
Confidence 6999998 999999999999877221110 0189999985200 011111 11112222111 24688889988
Q ss_pred cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----C--chhhHHHHHHHHC
Q psy9582 79 TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----N--PVNTNTYITMKSA 147 (329)
Q Consensus 79 ~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----N--P~~~~~~~~~~~~ 147 (329)
+++++||+||++ +|. ..++++++++..+..++..+|.++ + ..-.++.++.+..
T Consensus 78 eal~~ADiIIlA--VPs--------------~~i~~vl~~l~~~l~~~~~iVs~tKGie~~~~~~~~~se~i~e~l 137 (342)
T TIGR03376 78 EAAKGADILVFV--IPH--------------QFLEGICKQLKGHVKPNARAISCIKGLEVSKDGVKLLSDIIEEEL 137 (342)
T ss_pred HHHhcCCEEEEE--CCh--------------HHHHHHHHHHHhhcCCCCEEEEEeCCcccCCCcCccHHHHHHHHh
Confidence 999999999997 332 577888888887765666777776 2 3346777777765
No 72
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.42 E-value=7.7e-07 Score=67.85 Aligned_cols=94 Identities=17% Similarity=0.227 Sum_probs=64.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA 84 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a 84 (329)
||+|||+ |++|++++..|...+. . |.+|.++ +++ .+++.....++. +.... +..++++++
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~-~---~~~v~~~~~r~----~~~~~~~~~~~~---------~~~~~~~~~~~~~~a 62 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGI-K---PHEVIIVSSRS----PEKAAELAKEYG---------VQATADDNEEAAQEA 62 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-----GGEEEEEEESS----HHHHHHHHHHCT---------TEEESEEHHHHHHHT
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-C---ceeEEeeccCc----HHHHHHHHHhhc---------cccccCChHHhhccC
Confidence 7999998 9999999999999985 2 1288866 888 555543322221 22223 567899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
|+||++. +. ..+.++++.+... .++..+|-++||
T Consensus 63 dvvilav--~p--------------~~~~~v~~~i~~~-~~~~~vis~~ag 96 (96)
T PF03807_consen 63 DVVILAV--KP--------------QQLPEVLSEIPHL-LKGKLVISIAAG 96 (96)
T ss_dssp SEEEE-S---G--------------GGHHHHHHHHHHH-HTTSEEEEESTT
T ss_pred CEEEEEE--CH--------------HHHHHHHHHHhhc-cCCCEEEEeCCC
Confidence 9999983 11 3566677777444 478888888876
No 73
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.40 E-value=2.4e-06 Score=80.98 Aligned_cols=119 Identities=11% Similarity=0.151 Sum_probs=79.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCC----CCCCCCceEEEEecCCcccccc-hhhhHhhhh--hcccC------Cccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDL----LGKDQPIILQLLEASNKKSQKA-IKGVIMEIE--DCIFP------LLVD 70 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~----~~~~~~~ei~L~D~~~~~~~~~-~~~~~~dl~--~~~~~------~~~~ 70 (329)
+++||+|||+ |.+|+++|..|..++. ++. +|.||.++ ++. -+..+.++. +.... +..+
T Consensus 10 ~~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~----~V~lw~~~----~~~~~~~~~~~in~~~~N~~ylp~~~Lp~n 80 (365)
T PTZ00345 10 GPLKVSVIGS-GNWGSAISKVVGENTQRNYIFHN----EVRMWVLE----EIVEGEKLSDIINTKHENVKYLPGIKLPDN 80 (365)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCcccCCCC----eEEEEEec----ccccchHHHHHHHhcCCCcccCCCCcCCCc
Confidence 4589999999 9999999999998762 111 89999888 221 011222333 22211 2357
Q ss_pred eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh--hcCCCeEEEEEcC---ch----hhHHH
Q psy9582 71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS--VASRDVKVLVVGN---PV----NTNTY 141 (329)
Q Consensus 71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~--~~~p~a~viv~tN---P~----~~~~~ 141 (329)
+.+++|+.+++++||+||++ +|. +.+++++++++. +..+++++|.++- +. ..++.
T Consensus 81 i~~tsdl~eav~~aDiIvlA--VPs--------------q~l~~vl~~l~~~~~l~~~~~iIS~aKGIe~~t~~~~~~se 144 (365)
T PTZ00345 81 IVAVSDLKEAVEDADLLIFV--IPH--------------QFLESVLSQIKENNNLKKHARAISLTKGIIVENGKPVLCSD 144 (365)
T ss_pred eEEecCHHHHHhcCCEEEEE--cCh--------------HHHHHHHHHhccccccCCCCEEEEEeCCcccCCCCcccHHH
Confidence 88899988899999999987 332 577888888887 5445666666652 21 35677
Q ss_pred HHHHHC
Q psy9582 142 ITMKSA 147 (329)
Q Consensus 142 ~~~~~~ 147 (329)
++.+..
T Consensus 145 vi~e~l 150 (365)
T PTZ00345 145 VIEEEL 150 (365)
T ss_pred HHHHHh
Confidence 777765
No 74
>KOG1502|consensus
Probab=98.37 E-value=4.3e-06 Score=77.13 Aligned_cols=123 Identities=15% Similarity=0.062 Sum_probs=82.5
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC---CccceEeecC
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP---LLVDVSVHEN 76 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~---~~~~i~~~~~ 76 (329)
||. ..++|+|+||+|+||+.++..|+++|+ +|+-.=++.+. +++ .....++...... +..++.-...
T Consensus 1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY-------~V~gtVR~~~~-~k~-~~~L~~l~~a~~~l~l~~aDL~d~~s 71 (327)
T KOG1502|consen 1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGY-------TVRGTVRDPED-EKK-TEHLRKLEGAKERLKLFKADLLDEGS 71 (327)
T ss_pred CCCCCCcEEEEeCCchHHHHHHHHHHHhCCC-------EEEEEEcCcch-hhh-HHHHHhcccCcccceEEeccccccch
Confidence 554 468999999999999999999999999 78777666211 111 1134445422211 1234444556
Q ss_pred cccccCCccEEEEeCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 77 PITAFKDANIAILIGSFPRKSNM-ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~~~g~-~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+|++|||.||++|....-... ...+++.-.++...++.+.+.++. ...=+++|.
T Consensus 72 f~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TS 128 (327)
T KOG1502|consen 72 FDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTS 128 (327)
T ss_pred HHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEec
Confidence 77899999999999864322111 244678889999999999999973 333334443
No 75
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.36 E-value=3.2e-06 Score=82.88 Aligned_cols=123 Identities=18% Similarity=0.122 Sum_probs=79.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC----C-----ccceEeecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP----L-----LVDVSVHEN 76 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~----~-----~~~i~~~~~ 76 (329)
|||+|+|+ |.+|..+|..|+..|.-- +|+.+|++ +++++.+.........+ + ..+++++++
T Consensus 2 m~I~ViG~-GyvGl~~A~~lA~~g~g~-----~V~gvD~~----~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~ 71 (473)
T PLN02353 2 VKICCIGA-GYVGGPTMAVIALKCPDI-----EVVVVDIS----VPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTD 71 (473)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCC-----eEEEEECC----HHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcC
Confidence 57999998 999999999999875211 89999999 55554322111111000 1 125888888
Q ss_pred cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhH
Q psy9582 77 PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTN 139 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~ 139 (329)
..+++++||++|++.++|.+.+....+ -.-+...+.+.++.|.++.+++.+||+- |-|....
T Consensus 72 ~~~~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt 134 (473)
T PLN02353 72 VEKHVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA 134 (473)
T ss_pred HHHHHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChH
Confidence 778999999999999988753210000 0124456778888888877555555444 4576543
No 76
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.33 E-value=5.5e-06 Score=78.21 Aligned_cols=116 Identities=14% Similarity=0.030 Sum_probs=78.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh---hc--ccCCccceEeecCc
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE---DC--IFPLLVDVSVHENP 77 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~---~~--~~~~~~~i~~~~~~ 77 (329)
++++||+|+|+ |.+|+.++..|...+ ++++|.++ ++..+.+..+-. .. ......++..+++.
T Consensus 5 ~~~mkI~IiGa-Ga~G~alA~~La~~g--------~v~l~~~~----~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~ 71 (341)
T PRK12439 5 KREPKVVVLGG-GSWGTTVASICARRG--------PTLQWVRS----AETADDINDNHRNSRYLGNDVVLSDTLRATTDF 71 (341)
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCC--------CEEEEeCC----HHHHHHHHhcCCCcccCCCCcccCCCeEEECCH
Confidence 35689999999 999999999999876 36788876 333332211110 00 00111356777887
Q ss_pred ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh-----HHHHHHHHC
Q psy9582 78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT-----NTYITMKSA 147 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~-----~~~~~~~~~ 147 (329)
.++++++|+||++. | ...++++++++..+.+++..+|.++|-.+. +...+.+..
T Consensus 72 ~~a~~~aDlVilav--p--------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~l 130 (341)
T PRK12439 72 AEAANCADVVVMGV--P--------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEVL 130 (341)
T ss_pred HHHHhcCCEEEEEe--C--------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHHc
Confidence 78899999999982 2 146777788888776677788888886553 456666654
No 77
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.31 E-value=3e-06 Score=77.78 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=73.5
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CCccceEeecCcccccCCccE
Q psy9582 9 SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PLLVDVSVHENPITAFKDANI 86 (329)
Q Consensus 9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~~~~i~~~~~~~~al~~aDi 86 (329)
.|+||+|++|++++..|++.+... +|+.+|+... ..... ++..... ....+++-..++.++++++|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~-----~Vr~~d~~~~--~~~~~----~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~ 69 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIY-----EVRVLDRSPP--PKFLK----DLQKSGVKEYIQGDITDPESLEEALEGVDV 69 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCce-----EEEEcccccc--cccch----hhhcccceeEEEeccccHHHHHHHhcCCce
Confidence 389999999999999999988433 8999999831 11111 1111110 111344444567889999999
Q ss_pred EEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy9582 87 AILIGSFPRKSN-MERSELLAINSSIFIEQGKALNSVASRD 126 (329)
Q Consensus 87 Vi~~~g~~~~~g-~~~~~~~~~n~~~~~~i~~~i~~~~~p~ 126 (329)
||++|....-.+ .+...+...|+...+++.+...+.. -.
T Consensus 70 V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-Vk 109 (280)
T PF01073_consen 70 VFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VK 109 (280)
T ss_pred EEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 999987533233 4566788999999999999998863 44
No 78
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.31 E-value=4e-06 Score=78.00 Aligned_cols=104 Identities=18% Similarity=0.188 Sum_probs=66.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH----h---hhhhccc-------CCccce
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI----M---EIEDCIF-------PLLVDV 71 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~----~---dl~~~~~-------~~~~~i 71 (329)
+||+|||+ |.+|+++|..|+..|+ +|++||++ .+.++... . .+..... ....++
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~-------~V~v~d~~----~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i 70 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGH-------EVRLWDAD----PAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARI 70 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCC-------eeEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCe
Confidence 47999998 9999999999999987 89999998 33333211 0 0111100 112346
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
+.+++..+++++||+|+.+. | .+....+.+...+.+.++++.++ .||...
T Consensus 71 ~~~~~~~~a~~~ad~Vi~av--p------------e~~~~k~~~~~~l~~~~~~~~ii--~ssts~ 120 (308)
T PRK06129 71 RVTDSLADAVADADYVQESA--P------------ENLELKRALFAELDALAPPHAIL--ASSTSA 120 (308)
T ss_pred EEECcHHHhhCCCCEEEECC--c------------CCHHHHHHHHHHHHHhCCCcceE--EEeCCC
Confidence 77788777899999999973 1 12234455556677776445433 455443
No 79
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=98.30 E-value=5.7e-06 Score=80.08 Aligned_cols=110 Identities=14% Similarity=0.158 Sum_probs=71.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEeec
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSVHE 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~~~ 75 (329)
|||+|||. |.+|..+|..|+..|. +|+++|++ .++.+...........+. ..+++.++
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~-------~V~~~d~~----~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~ 68 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH-------EVTGVDID----QEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATT 68 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC-------eEEEEECC----HHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEEC
Confidence 47999998 9999999999999887 89999998 444432211100000000 12366777
Q ss_pred CcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 76 NPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+..+++++||+||++.+.|.....+ -+...+.+.++.+.++.+++.+|+..|
T Consensus 69 ~~~~~~~~advvii~vpt~~~~~~~------~d~~~v~~~~~~i~~~l~~g~lvi~~S 120 (411)
T TIGR03026 69 DYEDAIRDADVIIICVPTPLKEDGS------PDLSYVESAAETIAKHLRKGATVVLES 120 (411)
T ss_pred CHHHHHhhCCEEEEEeCCCCCCCCC------cChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 7677899999999997776543211 233455555666666555666666665
No 80
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.29 E-value=9.8e-06 Score=78.99 Aligned_cols=113 Identities=12% Similarity=0.154 Sum_probs=74.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecC-cccc
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HEN-PITA 80 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~-~~~a 80 (329)
++++||.|+||+|++|++++..|+..|. +|+.+|+.. .........+.. . + .+.. ..| ..++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-------~V~~ldr~~----~~~~~~~~~~~~-~-~---~~~~~~~Di~~~~ 181 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-------EVIVIDNFF----TGRKENLVHLFG-N-P---RFELIRHDVVEPI 181 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCC----CccHhHhhhhcc-C-C---ceEEEECcccccc
Confidence 3568999999999999999999999887 899999861 111101111110 0 0 1111 112 2345
Q ss_pred cCCccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 81 FKDANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 81 l~~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+.++|+||++|+... ....+..+.+..|+....++++.+++.. . .+|.+|.
T Consensus 182 ~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~--r~V~~SS 234 (436)
T PLN02166 182 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--RFLLTST 234 (436)
T ss_pred ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C--EEEEECc
Confidence 778999999987432 2223456778899999999999999863 3 5566654
No 81
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.27 E-value=4.9e-06 Score=81.21 Aligned_cols=126 Identities=17% Similarity=0.131 Sum_probs=96.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-----CCccceEeecCcc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-----PLLVDVSVHENPI 78 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-----~~~~~i~~~~~~~ 78 (329)
+.+.|.|+||+|++|+.+...++..+.- +|+++|.+ +.++..+..++.+... ++..+++-.....
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~------~i~l~~~~----E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~ 318 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPK------EIILFSRD----EYKLYLIDMELREKFPELKLRFYIGDVRDRDRVE 318 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCC------EEEEecCc----hHHHHHHHHHHHhhCCCcceEEEecccccHHHHH
Confidence 3578999999999999999999988542 99999999 6666666666665310 1224454445567
Q ss_pred cccCC--ccEEEEeCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc----CchhhHH
Q psy9582 79 TAFKD--ANIAILIGSFPRKSNM--ERSELLAINSSIFIEQGKALNSVASRDVKVLVVG----NPVNTNT 140 (329)
Q Consensus 79 ~al~~--aDiVi~~~g~~~~~g~--~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t----NP~~~~~ 140 (329)
.++++ .|+|+++|....-|-. +..+-+..|+-..+++++...++. -+.+|.+.| ||.|+|.
T Consensus 319 ~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV~PtNvmG 387 (588)
T COG1086 319 RAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAVNPTNVMG 387 (588)
T ss_pred HHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcccCCchHhh
Confidence 78888 9999999987766643 456778899999999999999975 676777766 8888764
No 82
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=98.26 E-value=6.9e-06 Score=76.69 Aligned_cols=114 Identities=14% Similarity=0.172 Sum_probs=73.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc----cCCccceEeecCccccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI----FPLLVDVSVHENPITAF 81 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~----~~~~~~i~~~~~~~~al 81 (329)
+||+|||+ |.+|+.++..|...+. +|.++|++ .++++....+..+.. ......+..+++..+++
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGH-------DVTLWARD----PEQAAEINADRENPRYLPGIKLPDNLRATTDLAEAL 69 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHH
Confidence 37999998 9999999999999887 89999998 444443222110100 00112355566666788
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh-----hHHHHHHHHC
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN-----TNTYITMKSA 147 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~-----~~~~~~~~~~ 147 (329)
+++|+||++... ..+.++.+.+..+.+++.+++.++|-++ .+...+.+..
T Consensus 70 ~~~D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~~~~~~~~~~~l~~~~ 124 (325)
T PRK00094 70 ADADLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIEPGTGKLLSEVLEEEL 124 (325)
T ss_pred hCCCEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeecccCCCCCcHHHHHHHHc
Confidence 999999998321 2345555666666557788888887544 2345555544
No 83
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.26 E-value=5.5e-06 Score=77.74 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc----ccCCccceEeecCc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC----IFPLLVDVSVHENP 77 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~----~~~~~~~i~~~~~~ 77 (329)
|...|||+|||+ |.+|+.++..|+..|. +|++||++ .++++......... ......++..+++.
T Consensus 1 ~~~~m~I~iIG~-G~mG~~ia~~L~~~G~-------~V~~~~r~----~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~ 68 (328)
T PRK14618 1 MHHGMRVAVLGA-GAWGTALAVLAASKGV-------PVRLWARR----PEFAAALAAERENREYLPGVALPAELYPTADP 68 (328)
T ss_pred CCCCCeEEEECc-CHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHhCcccccCCCCcCCCCeEEeCCH
Confidence 556679999999 9999999999999887 89999998 44443322111000 00111235566677
Q ss_pred ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
.++++++|+||++. |. ..++++.+. . .|+.+++.++|..
T Consensus 69 ~e~~~~aD~Vi~~v--~~--------------~~~~~v~~~---l-~~~~~vi~~~~Gi 107 (328)
T PRK14618 69 EEALAGADFAVVAV--PS--------------KALRETLAG---L-PRALGYVSCAKGL 107 (328)
T ss_pred HHHHcCCCEEEEEC--ch--------------HHHHHHHHh---c-CcCCEEEEEeecc
Confidence 77889999999972 11 112333332 2 3666788888864
No 84
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.25 E-value=6.7e-06 Score=77.06 Aligned_cols=114 Identities=17% Similarity=0.246 Sum_probs=74.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc----cCCccceEeecCccccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI----FPLLVDVSVHENPITAF 81 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~----~~~~~~i~~~~~~~~al 81 (329)
|||+|||| |.+|+.++..|.+.+. +|.+++++ ++.++.+..+-.... .....+++.+++..+++
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~-------~V~l~~r~----~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 68 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI-------SVNLWGRN----HTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVL 68 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC-------eEEEEecC----HHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHH
Confidence 47999999 9999999999999886 89999998 443433322111110 01123566777776776
Q ss_pred -CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEcCchhh-----HHHHHHHHC
Q psy9582 82 -KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS-VASRDVKVLVVGNPVNT-----NTYITMKSA 147 (329)
Q Consensus 82 -~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~-~~~p~a~viv~tNP~~~-----~~~~~~~~~ 147 (329)
.++|+||++. |. ..+.++++.+.. +.+++..++..+|=.+. ....+.+..
T Consensus 69 ~~~~Dliiiav--ks--------------~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~~~~~~~~~~l~~~~ 125 (326)
T PRK14620 69 SDNATCIILAV--PT--------------QQLRTICQQLQDCHLKKNTPILICSKGIEKSSLKFPSEIVNEIL 125 (326)
T ss_pred hCCCCEEEEEe--CH--------------HHHHHHHHHHHHhcCCCCCEEEEEEcCeeCCCCccHHHHHHHHc
Confidence 5899999972 11 456666677766 54567777778875532 244555554
No 85
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.25 E-value=3.7e-05 Score=66.51 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=66.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|+++|+|+ |++|++++..+...++ ||.+-.++. +++++..+..+. ..++. ....+|.+.||
T Consensus 2 ~~~~i~Gt-GniG~alA~~~a~ag~-------eV~igs~r~---~~~~~a~a~~l~-------~~i~~-~~~~dA~~~aD 62 (211)
T COG2085 2 MIIAIIGT-GNIGSALALRLAKAGH-------EVIIGSSRG---PKALAAAAAALG-------PLITG-GSNEDAAALAD 62 (211)
T ss_pred cEEEEecc-ChHHHHHHHHHHhCCC-------eEEEecCCC---hhHHHHHHHhhc-------ccccc-CChHHHHhcCC
Confidence 56999998 9999999999999997 899887772 333443332222 12333 24578999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
+||++. |. +.+.++.+.++..- .+.+||-.|||.
T Consensus 63 VVvLAV--P~--------------~a~~~v~~~l~~~~-~~KIvID~tnp~ 96 (211)
T COG2085 63 VVVLAV--PF--------------EAIPDVLAELRDAL-GGKIVIDATNPI 96 (211)
T ss_pred EEEEec--cH--------------HHHHhHHHHHHHHh-CCeEEEecCCCc
Confidence 999983 22 34555666666643 467889999994
No 86
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=98.25 E-value=2.6e-05 Score=74.76 Aligned_cols=119 Identities=15% Similarity=0.169 Sum_probs=71.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--------CccceEeecCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--------LLVDVSVHENP 77 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--------~~~~i~~~~~~ 77 (329)
|||+|||+ |.||..+|..++. |+ +|+.+|++ +++++...........+ ...+++.+++.
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~-------~VigvD~d----~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~ 67 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH-------EVVALDIL----PSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDK 67 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC-------cEEEEECC----HHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecch
Confidence 48999998 9999999977775 65 89999999 55554322111110001 11245555666
Q ss_pred ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHH
Q psy9582 78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYIT 143 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~ 143 (329)
.++.++||+||++.+.|...... .-+...+++.++.+.+. +++.+||+-| -|.+..-.+.
T Consensus 68 ~~~~~~ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~-~~g~lVV~~STv~pgtt~~l~ 128 (388)
T PRK15057 68 NEAYRDADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEI-NPYAVMVIKSTVPVGFTAAMH 128 (388)
T ss_pred hhhhcCCCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhc-CCCCEEEEeeecCCchHHHHH
Confidence 67889999999997665321111 12334555555655553 4666666554 5665444443
No 87
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.20 E-value=6.3e-06 Score=69.40 Aligned_cols=92 Identities=13% Similarity=0.215 Sum_probs=62.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||++||. |.+|+.++..|+..|+ +|+.||++ .++++ ++.+. ..+...+..++++++|
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~-------~v~~~d~~----~~~~~----~~~~~------g~~~~~s~~e~~~~~d 59 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGY-------EVTVYDRS----PEKAE----ALAEA------GAEVADSPAEAAEQAD 59 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTT-------EEEEEESS----HHHHH----HHHHT------TEEEESSHHHHHHHBS
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCC-------eEEeeccc----hhhhh----hhHHh------hhhhhhhhhhHhhccc
Confidence 57999998 9999999999999998 99999998 44443 23322 2556677788999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHH--HhhhcCCCeEEEEEcC
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKA--LNSVASRDVKVLVVGN 134 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~--i~~~~~p~a~viv~tN 134 (329)
+||.+- .+.+.++++... +.....+..++|..|+
T Consensus 60 vvi~~v---------------~~~~~v~~v~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 60 VVILCV---------------PDDDAVEAVLFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp EEEE-S---------------SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred ceEeec---------------ccchhhhhhhhhhHHhhccccceEEEecCC
Confidence 999972 122456666665 5555446666666654
No 88
>KOG2711|consensus
Probab=98.16 E-value=2.5e-05 Score=71.68 Aligned_cols=140 Identities=13% Similarity=0.211 Sum_probs=90.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccc--cchhhhHhhhhhcccCC------ccceEe
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQ--KAIKGVIMEIEDCIFPL------LVDVSV 73 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~--~~~~~~~~dl~~~~~~~------~~~i~~ 73 (329)
+.+.||+|||+ |++|+++|..+... .-+..-+| +|+.|-..+.-.. +++. .+.+-.|....+ ..++..
T Consensus 19 ~~~~kV~ivGs-GnWGsaiaki~~~n~~~~~~f~~-~Vrmwv~ee~i~~~~~~L~-eiIN~~heN~KYlpg~~lP~NvvA 95 (372)
T KOG2711|consen 19 RDPLKVCIVGS-GNWGSAIAKIVGENVKEFPIFDP-QVRMWVFEEEINGEAEKLT-EIINSRHENVKYLPGIKLPENVVA 95 (372)
T ss_pred cCceEEEEEcc-ChHHHHHHHHHhhhhhhccccCc-eeeEEEeccccCChhHHHH-HHhccccccccccCCccCCCCeEe
Confidence 34689999998 99999999988754 11111112 4555544310001 1222 122223333222 258888
Q ss_pred ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC--------c-hhhHHHHHH
Q psy9582 74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN--------P-VNTNTYITM 144 (329)
Q Consensus 74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN--------P-~~~~~~~~~ 144 (329)
.+|+.++++|||++|+. .|. +.+.+++++|..+-+|++..|-.+- | ..+++.++.
T Consensus 96 v~dl~ea~~dADilvf~--vPh--------------Qf~~~ic~~l~g~vk~~~~aISL~KG~e~~~~g~~i~liS~iI~ 159 (372)
T KOG2711|consen 96 VPDLVEAAKDADILVFV--VPH--------------QFIPRICEQLKGYVKPGATAISLIKGVEVGEEGPGIRLISQIIH 159 (372)
T ss_pred cchHHHHhccCCEEEEe--CCh--------------hhHHHHHHHHhcccCCCCeEEEeecceeccCCCCceeehHHHHH
Confidence 99999999999999997 343 4677889999998878887766642 3 578888888
Q ss_pred HHCCCCCCCcEEEechhHH
Q psy9582 145 KSAPDLSYKNFTAMLRLDH 163 (329)
Q Consensus 145 ~~~~~~~~~~i~~~t~lds 163 (329)
+.. ++|.. +..|+++.+
T Consensus 160 ~~l-gI~~~-vL~GaNiA~ 176 (372)
T KOG2711|consen 160 RAL-GIPCS-VLMGANIAS 176 (372)
T ss_pred HHh-CCCce-eecCCchHH
Confidence 888 77754 556666543
No 89
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=98.16 E-value=1.7e-05 Score=73.25 Aligned_cols=107 Identities=19% Similarity=0.141 Sum_probs=66.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCCccceEeecCcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~~~~i~~~~~~~~al~~a 84 (329)
|||+|+|+ |.+|+.++..|.+.|. +|.++|++ .+.++....+-... .......+..+.+.. .++++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~-------~V~~~~r~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 67 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH-------DVTLVARR----GAHLDALNENGLRLEDGEITVPVLAADDPA-ELGPQ 67 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-------eEEEEECC----hHHHHHHHHcCCcccCCceeecccCCCChh-HcCCC
Confidence 48999999 9999999999999886 89999997 33333221110000 000001112233333 34899
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY 141 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~ 141 (329)
|+||++... ..+.++++.+..+.+++..|+...|..+....
T Consensus 68 d~vila~k~----------------~~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~ 108 (304)
T PRK06522 68 DLVILAVKA----------------YQLPAALPSLAPLLGPDTPVLFLQNGVGHLEE 108 (304)
T ss_pred CEEEEeccc----------------ccHHHHHHHHhhhcCCCCEEEEecCCCCcHHH
Confidence 999998321 12345556666655567788889998765443
No 90
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.14 E-value=1e-05 Score=77.19 Aligned_cols=175 Identities=14% Similarity=0.076 Sum_probs=96.9
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA 80 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
||++++||.|+||+|++|++++..|.+.|+ +|+.+|+.. ...+.... +... -...++.-.....++
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~-------~V~~v~r~~---~~~~~~~~--~~~~--~~~~Dl~d~~~~~~~ 82 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGH-------YIIASDWKK---NEHMSEDM--FCHE--FHLVDLRVMENCLKV 82 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCC-------EEEEEEecc---cccccccc--ccce--EEECCCCCHHHHHHH
Confidence 678889999999999999999999999887 899999861 11111000 0000 000111111123345
Q ss_pred cCCccEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh-----HHH--HHHHHCC-C
Q psy9582 81 FKDANIAILIGSFPRKSN---MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT-----NTY--ITMKSAP-D 149 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g---~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~-----~~~--~~~~~~~-~ 149 (329)
++++|+||++++.....+ .........|+.....+++.+++.. .. .+|.+|...-. ... -+.+..+ .
T Consensus 83 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk-~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p 160 (370)
T PLN02695 83 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VK-RFFYASSACIYPEFKQLETNVSLKESDAWP 160 (370)
T ss_pred HhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CC-EEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence 678999999886431111 1223346789999999999888763 44 44445432100 000 0000000 1
Q ss_pred CCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582 150 LSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS 191 (329)
Q Consensus 150 ~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg 191 (329)
+.|....+.+-....++....++..+++..-++...++|.++
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 161 AEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 122223333444444444445666787766666655677654
No 91
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.12 E-value=3.6e-05 Score=75.19 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=73.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe-ecC-ccccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV-HEN-PITAF 81 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~-~~~-~~~al 81 (329)
+.+||.|+||+|++|++++..|++.|. +|+.+|+. .............. + ++.. ..| ...++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-------~V~~ld~~----~~~~~~~~~~~~~~--~---~~~~i~~D~~~~~l 181 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD-------SVIVVDNF----FTGRKENVMHHFSN--P---NFELIRHDVVEPIL 181 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC-------EEEEEeCC----CccchhhhhhhccC--C---ceEEEECCccChhh
Confidence 568999999999999999999999887 89999875 11111111111000 0 1111 112 23456
Q ss_pred CCccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 82 KDANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 82 ~~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.++|+||++|+... ....+....+..|+....++.+.+++.. ..+|++|.
T Consensus 182 ~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS 233 (442)
T PLN02206 182 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTST 233 (442)
T ss_pred cCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECC
Confidence 78999999987532 1122455678899999999999988763 35665554
No 92
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=98.12 E-value=4.6e-05 Score=73.80 Aligned_cols=114 Identities=16% Similarity=0.138 Sum_probs=71.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC----------Cccce
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP----------LLVDV 71 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~----------~~~~i 71 (329)
|+ .+||+|||. |.+|.++|..|++.|. +|+.+|++ +++++...........+ ....+
T Consensus 1 m~-~~kI~VIGl-G~~G~~~A~~La~~G~-------~V~~~D~~----~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l 67 (415)
T PRK11064 1 MS-FETISVIGL-GYIGLPTAAAFASRQK-------QVIGVDIN----QHAVDTINRGEIHIVEPDLDMVVKTAVEGGYL 67 (415)
T ss_pred CC-ccEEEEECc-chhhHHHHHHHHhCCC-------EEEEEeCC----HHHHHHHHCCCCCcCCCCHHHHHHHHhhcCce
Confidence 44 379999998 9999999999999987 89999999 55554321110000000 01223
Q ss_pred EeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cchhh
Q psy9582 72 SVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNT 138 (329)
Q Consensus 72 ~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~ 138 (329)
..+++ +++||+||++...|.+... ..++..+.+.++.+.++.+++.+||..| -|...
T Consensus 68 ~~~~~----~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgt 125 (415)
T PRK11064 68 RATTT----PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGA 125 (415)
T ss_pred eeecc----cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCH
Confidence 34332 3589999999877754321 1233455666677777665677776665 36543
No 93
>PLN02650 dihydroflavonol-4-reductase
Probab=98.11 E-value=2.5e-05 Score=73.80 Aligned_cols=118 Identities=14% Similarity=0.172 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-c----cCC-ccceEeecC
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-I----FPL-LVDVSVHEN 76 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~----~~~-~~~i~~~~~ 76 (329)
+.+++|.|+||+|++|++++..|+..|. +|++++++ ...+... .++... . ..+ ..++.-...
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~-------~V~~~~r~----~~~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~ 70 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRD----PANVKKV-KHLLDLPGATTRLTLWKADLAVEGS 70 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCC-------EEEEEEcC----cchhHHH-HHHHhccCCCCceEEEEecCCChhh
Confidence 4568999999999999999999999887 89988887 2222211 111110 0 000 012211123
Q ss_pred cccccCCccEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 77 PITAFKDANIAILIGSFPRKSNME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~~~g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
..++++++|+||++|+.......+ ....+..|+.....+.+.+.+.. .-..||++|
T Consensus 71 ~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~S 127 (351)
T PLN02650 71 FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTS 127 (351)
T ss_pred HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 456788999999998753211112 23567889999999999988753 223555554
No 94
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.09 E-value=2e-05 Score=73.82 Aligned_cols=121 Identities=14% Similarity=0.118 Sum_probs=75.4
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT 79 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~ 79 (329)
||+ .++|.|+||+|++|++++..|+..+... +|+++|++ .........++......+ ..++.-..+..+
T Consensus 1 ~~~-~k~vLVTGatG~IG~~l~~~L~~~g~~~-----~V~~~~r~----~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~ 70 (324)
T TIGR03589 1 MFN-NKSILITGGTGSFGKAFISRLLENYNPK-----KIIIYSRD----ELKQWEMQQKFPAPCLRFFIGDVRDKERLTR 70 (324)
T ss_pred CcC-CCEEEEeCCCCHHHHHHHHHHHHhCCCc-----EEEEEcCC----hhHHHHHHHHhCCCcEEEEEccCCCHHHHHH
Confidence 443 5789999999999999999999875211 79999987 222221111111100000 012221223455
Q ss_pred ccCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 80 AFKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 80 al~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
++++.|+||++++....+ ..+..+.+..|+.....+.+.+.+.. .. .||++|
T Consensus 71 ~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~-~iV~~S 124 (324)
T TIGR03589 71 ALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VK-RVVALS 124 (324)
T ss_pred HHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence 678899999998864322 23455678899999999999988753 33 455554
No 95
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=98.07 E-value=1.3e-05 Score=75.53 Aligned_cols=104 Identities=19% Similarity=0.209 Sum_probs=65.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh---hhhhccc-C---CccceEeecCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM---EIEDCIF-P---LLVDVSVHENPI 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~---dl~~~~~-~---~~~~i~~~~~~~ 78 (329)
+||+|||+ |.+|+.+|..|.+.|. +|.++|++ .. .+.... ...+... . ...++..+++.
T Consensus 3 mkI~IiG~-G~mG~~~A~~L~~~G~-------~V~~~~r~----~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~- 68 (341)
T PRK08229 3 ARICVLGA-GSIGCYLGGRLAAAGA-------DVTLIGRA----RI-GDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP- 68 (341)
T ss_pred ceEEEECC-CHHHHHHHHHHHhcCC-------cEEEEecH----HH-HHHHHhcCceeecCCCcceecccceeEeccCh-
Confidence 47999999 9999999999999987 89999987 21 111110 0000000 0 01234445554
Q ss_pred cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 79 TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 79 ~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
++++++|+||++...+. ..++++.+....+++.+|+..+|..+..
T Consensus 69 ~~~~~~D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~ 113 (341)
T PRK08229 69 AALATADLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA 113 (341)
T ss_pred hhccCCCEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence 67899999999843211 1234455555555778888888976643
No 96
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.06 E-value=2.4e-05 Score=77.72 Aligned_cols=118 Identities=13% Similarity=0.098 Sum_probs=74.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-----cc----CC---ccc
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-----IF----PL---LVD 70 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-----~~----~~---~~~ 70 (329)
++.+.|.|+||+|++|..++..|+..|. +|++++++ .+++......+.+. .. .. ..+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~-------~Vval~Rn----~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gD 146 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRS----AQRAESLVQSVKQMKLDVEGTQPVEKLEIVECD 146 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHhhhhccccccccccCceEEEEec
Confidence 3456899999999999999999999887 89999998 44443332222110 00 00 011
Q ss_pred eEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 71 VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 71 i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+.-..+..+++.++|+||+++|............+..|......+++.+.+.. -. .||++|
T Consensus 147 LtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-Vg-RIV~VS 207 (576)
T PLN03209 147 LEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VN-HFILVT 207 (576)
T ss_pred CCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CC-EEEEEc
Confidence 11112334568899999999876543222233345678888888888887753 34 444444
No 97
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.06 E-value=2.6e-05 Score=72.60 Aligned_cols=80 Identities=11% Similarity=0.143 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..+||+|||+ |.+|++++..|...|+ +|++||++ .. .+..+++++
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~-------~V~~~~r~----~~-----------------------~~~~~~~~~ 47 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGH-------RVRVWSRR----SG-----------------------LSLAAVLAD 47 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCC-------EEEEEeCC----CC-----------------------CCHHHHHhc
Confidence 4589999998 9999999999999987 89999998 21 123467789
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-cCCCeEEEEEcC
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV-ASRDVKVLVVGN 134 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~-~~p~a~viv~tN 134 (329)
+|+||++. |. ..++++++.+..+ ..++++++..|+
T Consensus 48 advvi~~v--p~--------------~~~~~v~~~l~~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 48 ADVIVSAV--SM--------------KGVRPVAEQVQALNLPPETIIVTATK 83 (308)
T ss_pred CCEEEEEC--Ch--------------HHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 99999983 21 3456666667643 346778888887
No 98
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=98.06 E-value=2e-05 Score=72.88 Aligned_cols=106 Identities=17% Similarity=0.137 Sum_probs=64.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHh---hhhhcccCCccceEeecCcccccC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIM---EIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~---dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
|||+|+|+ |.+|..++..|.+.|. +|.++++. + +++.... .+..............++..++.+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~-------~V~~~~r~----~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR-------DVTFLVRP----K-RAKALRERGLVIRSDHGDAVVPGPVITDPEELTG 67 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC-------ceEEEecH----H-HHHHHHhCCeEEEeCCCeEEecceeecCHHHccC
Confidence 58999999 9999999999999886 89999983 1 1221110 111000000011222344444568
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT 140 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~ 140 (329)
++|+||++... ..+.++++.+..+..++..|+.+.|..+...
T Consensus 68 ~~d~vilavk~----------------~~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~ 109 (305)
T PRK12921 68 PFDLVILAVKA----------------YQLDAAIPDLKPLVGEDTVIIPLQNGIGQLE 109 (305)
T ss_pred CCCEEEEEecc----------------cCHHHHHHHHHhhcCCCCEEEEeeCCCChHH
Confidence 99999998322 1244455566665456778888899876443
No 99
>PLN02427 UDP-apiose/xylose synthase
Probab=98.05 E-value=1.7e-05 Score=75.98 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=70.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhh--c--ccCCc-cceEeecCc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED--C--IFPLL-VDVSVHENP 77 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~--~--~~~~~-~~i~~~~~~ 77 (329)
+++||.|+||+|++|++++..|++. +. +|+.+|++ ..+.... ..... . ...+. .++.-..+.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-------~V~~l~r~----~~~~~~l-~~~~~~~~~~~~~~~~~Dl~d~~~l 80 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH-------KVLALDVY----NDKIKHL-LEPDTVPWSGRIQFHRINIKHDSRL 80 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC-------EEEEEecC----chhhhhh-hccccccCCCCeEEEEcCCCChHHH
Confidence 3579999999999999999999987 45 89999986 2222111 00000 0 00000 111111234
Q ss_pred ccccCCccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 78 ITAFKDANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.++++++|+||++|+.... ......+.+..|+....++.+..++.. ..+|.+|.
T Consensus 81 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS 136 (386)
T PLN02427 81 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFST 136 (386)
T ss_pred HHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEee
Confidence 5678899999999875321 112233456678888888888877653 35555553
No 100
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.04 E-value=2.8e-05 Score=73.51 Aligned_cols=176 Identities=13% Similarity=0.075 Sum_probs=96.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-C--C-ccceEeecCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-P--L-LVDVSVHENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~--~-~~~i~~~~~~~~a 80 (329)
++||.|+||+|++|++++..|+..+. +|+.+|+........+........+... . + ..++.-...+.+.
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~ 87 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLNQ-------TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA 87 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence 47999999999999999999999886 8999998621100001100000000000 0 0 0111111123345
Q ss_pred cCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhh---HHHHHHHHCCCCCCCcE
Q psy9582 81 FKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNT---NTYITMKSAPDLSYKNF 155 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~---~~~~~~~~~~~~~~~~i 155 (329)
++++|+||++|+....+ ..........|+....++.+.+++.. .. .++.+|-..-. -.....+..+. .|...
T Consensus 88 ~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~-~~v~~SS~~vyg~~~~~~~~e~~~~-~p~~~ 164 (348)
T PRK15181 88 CKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VS-SFTYAASSSTYGDHPDLPKIEERIG-RPLSP 164 (348)
T ss_pred hhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEeechHhhCCCCCCCCCCCCCC-CCCCh
Confidence 78999999998754321 23345567899999999999998863 33 44444421000 00000111111 12234
Q ss_pred EEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582 156 TAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190 (329)
Q Consensus 156 ~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h 190 (329)
.+.+-+...++....++..+++...++...+.|.+
T Consensus 165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~ 199 (348)
T PRK15181 165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRR 199 (348)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcC
Confidence 44454444445445566668887777776677864
No 101
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.03 E-value=4.5e-05 Score=70.85 Aligned_cols=107 Identities=10% Similarity=-0.021 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cC---C-ccceEeecCc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FP---L-LVDVSVHENP 77 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~---~-~~~i~~~~~~ 77 (329)
+.++|.|+||+|++|++++..|+..|. +|++++++. .... ....+.... .+ + ..++.-....
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-------~V~~~~r~~----~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 70 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-------TVKATVRDP----NDPK-KTEHLLALDGAKERLHLFKANLLEEGSF 70 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-------EEEEEEcCC----Cchh-hHHHHHhccCCCCceEEEeccccCcchH
Confidence 457999999999999999999999987 899888872 2111 111111000 00 0 0122222234
Q ss_pred ccccCCccEEEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 78 ITAFKDANIAILIGSFPRKSN-MERSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g-~~~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
.++++++|+||++++...... ......+..|+.....+.+.+.+.
T Consensus 71 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~ 116 (322)
T PLN02662 71 DSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV 116 (322)
T ss_pred HHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC
Confidence 567889999999987543211 222356778999999999988775
No 102
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=98.03 E-value=4.4e-05 Score=68.39 Aligned_cols=102 Identities=20% Similarity=0.185 Sum_probs=62.0
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA 80 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
||+ .+||+|||+ |++|.+++..|+..+.... .++.+++++. .++++ ++.+. + .+..+.+..+.
T Consensus 1 ~m~-~~kI~iIG~-G~mg~ala~~l~~~~~~~~---~~i~~~~~~~---~~~~~----~~~~~---~--~~~~~~~~~~~ 63 (245)
T PRK07634 1 MLK-KHRILFIGA-GRMAEAIFSGLLKTSKEYI---EEIIVSNRSN---VEKLD----QLQAR---Y--NVSTTTDWKQH 63 (245)
T ss_pred CCC-CCeEEEECc-CHHHHHHHHHHHhCCCCCc---CeEEEECCCC---HHHHH----HHHHH---c--CcEEeCChHHH
Confidence 664 589999998 9999999999987753210 0477787641 23333 22221 1 23345666778
Q ss_pred cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
++++|+||++. |. ...+++++++..+. ++..||.++.-+
T Consensus 64 ~~~~DiViiav--p~--------------~~~~~v~~~l~~~~-~~~~vis~~~gi 102 (245)
T PRK07634 64 VTSVDTIVLAM--PP--------------SAHEELLAELSPLL-SNQLVVTVAAGI 102 (245)
T ss_pred HhcCCEEEEec--CH--------------HHHHHHHHHHHhhc-cCCEEEEECCCC
Confidence 89999999972 11 23455555555543 344666665543
No 103
>PRK07680 late competence protein ComER; Validated
Probab=98.02 E-value=3.9e-05 Score=70.10 Aligned_cols=100 Identities=10% Similarity=0.151 Sum_probs=67.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|.+++..|...+.+.. .+|.++|++ .++++. +.+. + ..+..+.+..+.++++|
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~---~~v~v~~r~----~~~~~~----~~~~---~-~g~~~~~~~~~~~~~aD 64 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKP---SQLTITNRT----PAKAYH----IKER---Y-PGIHVAKTIEEVISQSD 64 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCc---ceEEEECCC----HHHHHH----HHHH---c-CCeEEECCHHHHHHhCC
Confidence 47999998 9999999999998874321 179999998 443332 2111 0 12445556667789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
+||++. + + ..+.++++.+..+..++.+|+.++|++.
T Consensus 65 iVilav--~--p------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 65 LIFICV--K--P------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred EEEEec--C--H------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 999983 1 1 2345555666655446778888888764
No 104
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.97 E-value=6.4e-05 Score=68.69 Aligned_cols=95 Identities=18% Similarity=0.287 Sum_probs=61.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||++||+ |++|++++..|++.+.+..+ +|..+|++ .++++. +.+. + .+..+.+..+.+++||
T Consensus 3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~---~I~v~~r~----~~~~~~----l~~~---~--g~~~~~~~~e~~~~aD 65 (272)
T PRK12491 3 KQIGFIGC-GNMGIAMIGGMINKNIVSPD---QIICSDLN----VSNLKN----ASDK---Y--GITITTNNNEVANSAD 65 (272)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCCCCc---eEEEECCC----HHHHHH----HHHh---c--CcEEeCCcHHHHhhCC
Confidence 58999998 99999999999988764322 79999998 444332 2211 0 1334456667789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+||++.. | ..+.++.+.+..+.+++.+||-+.
T Consensus 66 iIiLavk----P------------~~~~~vl~~l~~~~~~~~lvISi~ 97 (272)
T PRK12491 66 ILILSIK----P------------DLYSSVINQIKDQIKNDVIVVTIA 97 (272)
T ss_pred EEEEEeC----h------------HHHHHHHHHHHHhhcCCcEEEEeC
Confidence 9999732 1 244455555555444555555443
No 105
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.94 E-value=9.4e-05 Score=72.12 Aligned_cols=93 Identities=22% Similarity=0.228 Sum_probs=62.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||+||||+|.+|.+++..|...|. +|.++|++ .+.+...+.++ .+..+++..+++.+||
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~-------~V~v~~r~----~~~~~~~a~~~---------gv~~~~~~~e~~~~aD 60 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF-------EVIVTGRD----PKKGKEVAKEL---------GVEYANDNIDAAKDAD 60 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC-------EEEEEECC----hHHHHHHHHHc---------CCeeccCHHHHhccCC
Confidence 4899999669999999999999886 89999998 33322221111 1234456667889999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+||++... ..+.++++.+..+.+++++|+-++.
T Consensus 61 vVIlavp~----------------~~~~~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 61 IVIISVPI----------------NVTEDVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred EEEEecCH----------------HHHHHHHHHHHhhCCCCCEEEEccc
Confidence 99998321 1233444555555557778777775
No 106
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.94 E-value=6.6e-05 Score=69.97 Aligned_cols=111 Identities=19% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEeecCccc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSVHENPIT 79 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~~~~~~~ 79 (329)
|-+..+||+|+|+ |.+|+.+|..|...|. +|.+++++. .+........+...... ....+.+.++ .+
T Consensus 1 ~~~~~m~I~IiG~-GaiG~~lA~~L~~~g~-------~V~~~~r~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 68 (313)
T PRK06249 1 MDSETPRIGIIGT-GAIGGFYGAMLARAGF-------DVHFLLRSD---YEAVRENGLQVDSVHGDFHLPPVQAYRS-AE 68 (313)
T ss_pred CCCcCcEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEEeCC---HHHHHhCCeEEEeCCCCeeecCceEEcc-hh
Confidence 4456689999999 9999999999999886 899999872 11111100011100000 0112333333 34
Q ss_pred ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 80 AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 80 al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
+...+|+||++.-.. ...+.++.+....++++.++...|=.+..
T Consensus 69 ~~~~~D~vilavK~~----------------~~~~~~~~l~~~~~~~~~iv~lqNG~~~~ 112 (313)
T PRK06249 69 DMPPCDWVLVGLKTT----------------ANALLAPLIPQVAAPDAKVLLLQNGLGVE 112 (313)
T ss_pred hcCCCCEEEEEecCC----------------ChHhHHHHHhhhcCCCCEEEEecCCCCcH
Confidence 577899999983211 12344555555555788888888876643
No 107
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.92 E-value=7.9e-05 Score=72.35 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC----------ccceEe
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL----------LVDVSV 73 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~----------~~~i~~ 73 (329)
.+|||+|||- |.||..+|..|+.+ + +|+.||++ +++.+.. .....+. ...+..
T Consensus 5 ~~mkI~vIGl-GyvGlpmA~~la~~-~-------~V~g~D~~----~~~ve~l----~~G~~~~~e~~~~~l~~~g~l~~ 67 (425)
T PRK15182 5 DEVKIAIIGL-GYVGLPLAVEFGKS-R-------QVVGFDVN----KKRILEL----KNGVDVNLETTEEELREARYLKF 67 (425)
T ss_pred CCCeEEEECc-CcchHHHHHHHhcC-C-------EEEEEeCC----HHHHHHH----HCcCCCCCCCCHHHHHhhCCeeE
Confidence 4689999998 99999999998774 4 89999999 5554432 2111110 124556
Q ss_pred ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-Cchh
Q psy9582 74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVN 137 (329)
Q Consensus 74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~ 137 (329)
+++ .+++++||++|++.+.|.+...+ .++..+..-.+.|.++.+++.+||+-| -|..
T Consensus 68 t~~-~~~~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pg 125 (425)
T PRK15182 68 TSE-IEKIKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPG 125 (425)
T ss_pred EeC-HHHHcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 665 46799999999998888643221 122344444455555554566666654 4544
No 108
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.91 E-value=5.2e-05 Score=70.66 Aligned_cols=108 Identities=14% Similarity=0.137 Sum_probs=69.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a 84 (329)
|||.|+||+|++|++++..|++.|+ +|+.++++ .++.. .+.+..... ..++.-..++.++++++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~-------~V~~l~R~----~~~~~----~l~~~~v~~v~~Dl~d~~~l~~al~g~ 65 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY-------QVRCLVRN----LRKAS----FLKEWGAELVYGDLSLPETLPPSFKGV 65 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcC----hHHhh----hHhhcCCEEEECCCCCHHHHHHHHCCC
Confidence 4899999999999999999999887 89999987 22221 111110000 01222223456789999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
|+||++++.... ........|......+++.+++.. .. .+|.+|
T Consensus 66 d~Vi~~~~~~~~---~~~~~~~~~~~~~~~l~~aa~~~g-vk-r~I~~S 109 (317)
T CHL00194 66 TAIIDASTSRPS---DLYNAKQIDWDGKLALIEAAKAAK-IK-RFIFFS 109 (317)
T ss_pred CEEEECCCCCCC---CccchhhhhHHHHHHHHHHHHHcC-CC-EEEEec
Confidence 999998653221 112344567788888888888864 44 444444
No 109
>PLN02214 cinnamoyl-CoA reductase
Probab=97.90 E-value=0.00013 Score=68.87 Aligned_cols=113 Identities=14% Similarity=0.057 Sum_probs=73.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhh-hHhhhhhcc--cCC-ccceEeecCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG-VIMEIEDCI--FPL-LVDVSVHENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~-~~~dl~~~~--~~~-~~~i~~~~~~~~a 80 (329)
.++|.|+||+|++|++++..|++.|. +|+.++++ .+.... ....+.... ..+ ..++.-..+..++
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 78 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY-------TVKGTVRN----PDDPKNTHLRELEGGKERLILCKADLQDYEALKAA 78 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCC----chhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHH
Confidence 46899999999999999999999987 89999887 222111 111111100 000 0122222334567
Q ss_pred cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
++++|+||++++... ......+..|+.....+.+.+.+.. .. .+|++|
T Consensus 79 ~~~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~-v~-r~V~~S 126 (342)
T PLN02214 79 IDGCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAK-VK-RVVITS 126 (342)
T ss_pred HhcCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcC-CC-EEEEec
Confidence 889999999987542 2345667889999999999988763 34 444443
No 110
>PLN00198 anthocyanidin reductase; Provisional
Probab=97.90 E-value=0.00013 Score=68.45 Aligned_cols=117 Identities=9% Similarity=0.085 Sum_probs=70.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH--hhhhhcc-cCC-ccceEeecCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI--MEIEDCI-FPL-LVDVSVHENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~--~dl~~~~-~~~-~~~i~~~~~~~~a 80 (329)
+++|.|+||+|++|++++..|++.|. +|++++++ ........ ..+.... ... ..+++-..+..+.
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 77 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGY-------AVNTTVRD----PENQKKIAHLRALQELGDLKIFGADLTDEESFEAP 77 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCC-------EEEEEECC----CCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHH
Confidence 47899999999999999999999887 88877776 22111100 0111000 000 0112111233456
Q ss_pred cCCccEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 81 FKDANIAILIGSFPRKSNME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
++++|+||++|+.......+ ....+..|+.....+.+.+.+..... .+|++|
T Consensus 78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~-~~v~~S 130 (338)
T PLN00198 78 IAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVK-RVILTS 130 (338)
T ss_pred HhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEee
Confidence 78999999998743222122 23456789999999999988763223 444443
No 111
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.89 E-value=0.00015 Score=67.59 Aligned_cols=118 Identities=14% Similarity=0.046 Sum_probs=72.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-c----cCC-ccceEeecC
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-I----FPL-LVDVSVHEN 76 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~----~~~-~~~i~~~~~ 76 (329)
...++|.|+||+|++|++++..|+..|. +|++.+++ ....... ..+... . ..+ ..++.-..+
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~ 70 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGY-------TINATVRD----PKDRKKT-DHLLALDGAKERLKLFKADLLDEGS 70 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcC----CcchhhH-HHHHhccCCCCceEEEeCCCCCchH
Confidence 3458999999999999999999999887 88888877 2222111 111100 0 000 012221223
Q ss_pred cccccCCccEEEEeCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 77 PITAFKDANIAILIGSFPRKS-N-MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~~~-g-~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
..+++++.|+||++++..... . ......+..|+.....+.+.+.+.. .-..||++|
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~S 128 (325)
T PLN02989 71 FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTS 128 (325)
T ss_pred HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 345677899999998853211 1 2234567789999999999887753 223455544
No 112
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.88 E-value=6.4e-05 Score=68.91 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=56.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|.+++..|...|. +|.++|++ .+.++. ..+. . . +....+..+++++||
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~-------~V~~~d~~----~~~~~~-a~~~---g--~---~~~~~~~~~~~~~aD 59 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH-------TVYGVSRR----ESTCER-AIER---G--L---VDEASTDLSLLKDCD 59 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHH-HHHC---C--C---cccccCCHhHhcCCC
Confidence 47999998 9999999999998886 89999998 433331 1111 1 0 111122245789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV 132 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~ 132 (329)
+||++.. . ..+.++.+.+..+.+++++|..+
T Consensus 60 lVilavp--~--------------~~~~~~~~~l~~~l~~~~ii~d~ 90 (279)
T PRK07417 60 LVILALP--I--------------GLLLPPSEQLIPALPPEAIVTDV 90 (279)
T ss_pred EEEEcCC--H--------------HHHHHHHHHHHHhCCCCcEEEeC
Confidence 9999832 1 12333445565555566655443
No 113
>PLN02778 3,5-epimerase/4-reductase
Probab=97.86 E-value=0.00026 Score=65.55 Aligned_cols=89 Identities=11% Similarity=0.069 Sum_probs=61.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.+||.|+||+|++|++++..|...|. +|++...+ .........++. . .+.
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-------~V~~~~~~----~~~~~~v~~~l~------------------~-~~~ 58 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI-------DFHYGSGR----LENRASLEADID------------------A-VKP 58 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC-------EEEEecCc----cCCHHHHHHHHH------------------h-cCC
Confidence 48999999999999999999999887 77655433 111111111111 0 268
Q ss_pred cEEEEeCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582 85 NIAILIGSFPRKSN-----MERSELLAINSSIFIEQGKALNSVA 123 (329)
Q Consensus 85 DiVi~~~g~~~~~g-----~~~~~~~~~n~~~~~~i~~~i~~~~ 123 (329)
|+||++|+....+. ....+.+..|+.....+++.+++..
T Consensus 59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g 102 (298)
T PLN02778 59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG 102 (298)
T ss_pred CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999988643221 2345677899999999999998863
No 114
>PLN02240 UDP-glucose 4-epimerase
Probab=97.86 E-value=0.00012 Score=68.92 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=72.4
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-c--cCC-ccceEeecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-I--FPL-LVDVSVHEN 76 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~--~~~-~~~i~~~~~ 76 (329)
||.+.+||.|+||+|++|++++..|++.+. +|+++|+.......... ...+.... . ... ..++.-..+
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGY-------KVVVIDNLDNSSEEALR-RVKELAGDLGDNLVFHKVDLRDKEA 72 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCCcchHHHHH-HHHHhhcccCccceEEecCcCCHHH
Confidence 566668999999999999999999998886 89999875110000011 11111100 0 000 011111112
Q ss_pred cccccC--CccEEEEeCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 77 PITAFK--DANIAILIGSFPRK-SN-MERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 77 ~~~al~--~aDiVi~~~g~~~~-~g-~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..++++ +.|+||++++.... .. ......+..|+.....+++.+.+.. .. .++.+|.
T Consensus 73 l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss 132 (352)
T PLN02240 73 LEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CK-KLVFSSS 132 (352)
T ss_pred HHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEcc
Confidence 222333 68999999875421 11 2345677889999999999887752 33 4455553
No 115
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.86 E-value=0.00018 Score=67.03 Aligned_cols=110 Identities=13% Similarity=-0.031 Sum_probs=68.0
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cCC----ccceEee
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FPL----LVDVSVH 74 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~~----~~~i~~~ 74 (329)
|....++|.|+||+|++|++++..|++.|. +|++..++ ..... ....+.... .+. ..++.-.
T Consensus 1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~ 68 (322)
T PLN02986 1 MNGGGKLVCVTGASGYIASWIVKLLLLRGY-------TVKATVRD----LTDRK-KTEHLLALDGAKERLKLFKADLLEE 68 (322)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECC----CcchH-HHHHHHhccCCCCceEEEecCCCCc
Confidence 334568999999999999999999999887 78876665 22111 111111100 000 0122212
Q ss_pred cCcccccCCccEEEEeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 75 ENPITAFKDANIAILIGSFPRKS-NMERSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 75 ~~~~~al~~aDiVi~~~g~~~~~-g~~~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
....++++++|+||++|+..... .....+++..|+.....+.+.+.+.
T Consensus 69 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~ 117 (322)
T PLN02986 69 SSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET 117 (322)
T ss_pred chHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence 23455678999999998753211 1122345678999999999888764
No 116
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.86 E-value=7.5e-05 Score=67.86 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=62.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|+.++..|...+.. +.+|.++|++ .++++. +.+. + .+.++.+..+.++++|
T Consensus 3 m~I~iIG~-G~mG~~la~~l~~~g~~----~~~v~v~~r~----~~~~~~----~~~~---~--g~~~~~~~~~~~~~ad 64 (267)
T PRK11880 3 KKIGFIGG-GNMASAIIGGLLASGVP----AKDIIVSDPS----PEKRAA----LAEE---Y--GVRAATDNQEAAQEAD 64 (267)
T ss_pred CEEEEEec-hHHHHHHHHHHHhCCCC----cceEEEEcCC----HHHHHH----HHHh---c--CCeecCChHHHHhcCC
Confidence 47999998 99999999999987631 1179999998 443332 2211 0 1233455566788999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
+||++. +. ..++++.+.+..+. +..|+.++|-+
T Consensus 65 vVil~v--~~--------------~~~~~v~~~l~~~~--~~~vvs~~~gi 97 (267)
T PRK11880 65 VVVLAV--KP--------------QVMEEVLSELKGQL--DKLVVSIAAGV 97 (267)
T ss_pred EEEEEc--CH--------------HHHHHHHHHHHhhc--CCEEEEecCCC
Confidence 999973 11 34566666666553 44667777754
No 117
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.85 E-value=0.00014 Score=66.57 Aligned_cols=99 Identities=20% Similarity=0.199 Sum_probs=62.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||++||+ |.+|++++..|+..+... +.+|.++|++. +++++ ++... + .++++.+..+++++||
T Consensus 4 mkI~~IG~-G~mG~aia~~l~~~g~~~---~~~v~v~~r~~---~~~~~----~l~~~---~--g~~~~~~~~e~~~~aD 67 (279)
T PRK07679 4 QNISFLGA-GSIAEAIIGGLLHANVVK---GEQITVSNRSN---ETRLQ----ELHQK---Y--GVKGTHNKKELLTDAN 67 (279)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCC---cceEEEECCCC---HHHHH----HHHHh---c--CceEeCCHHHHHhcCC
Confidence 79999998 999999999999887322 12799999861 22333 22211 1 1344556667789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
+||++.. | ..+.++++.+..+..++.+||.+.+-+
T Consensus 68 vVilav~----p------------~~~~~vl~~l~~~~~~~~liIs~~aGi 102 (279)
T PRK07679 68 ILFLAMK----P------------KDVAEALIPFKEYIHNNQLIISLLAGV 102 (279)
T ss_pred EEEEEeC----H------------HHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 9999731 1 123334455555444666777764443
No 118
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.85 E-value=0.0001 Score=59.23 Aligned_cols=103 Identities=12% Similarity=0.110 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.+||+|||+ |++|.+|+..|...|+ +|.-+-... .+.. ..+.+. .....+ .+..+.+++|
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~-------~v~~v~srs---~~sa----~~a~~~----~~~~~~-~~~~~~~~~a 69 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGH-------EVVGVYSRS---PASA----ERAAAF----IGAGAI-LDLEEILRDA 69 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTS-------EEEEESSCH---H-HH----HHHHC------TT------TTGGGCC-
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEEeCC---cccc----cccccc----cccccc-cccccccccC
Confidence 489999999 9999999999999887 666554330 2111 122221 112222 2456789999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh--cCCCeEEEEEc--CchhhHHHHH
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV--ASRDVKVLVVG--NPVNTNTYIT 143 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~--~~p~a~viv~t--NP~~~~~~~~ 143 (329)
|++|++. |+ ..+.+++++|..+ ..|+.+|+-.| -+++++..+-
T Consensus 70 Dlv~iav-----pD-----------daI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~~ 116 (127)
T PF10727_consen 70 DLVFIAV-----PD-----------DAIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPAR 116 (127)
T ss_dssp SEEEE-S------C-----------CHHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHHH
T ss_pred CEEEEEe-----ch-----------HHHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhHH
Confidence 9999982 11 3677888888876 33565655554 5777877754
No 119
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.84 E-value=9.8e-05 Score=68.53 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=72.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~a 84 (329)
+||.|+||+|++|++++..|++.|. +|+++|++ .+.... +.+..... ..++.-..+..++++++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~ 65 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE-------EVRVLVRP----TSDRRN----LEGLDVEIVEGDLRDPASLRKAVAGC 65 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC-------EEEEEEec----Cccccc----cccCCceEEEeeCCCHHHHHHHHhCC
Confidence 4799999999999999999999886 89999997 222211 11100000 01111112345678899
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+||++++.......+.......|+.....+++.+.+.. .. .+|+.|.
T Consensus 66 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS 113 (328)
T TIGR03466 66 RALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VE-RVVYTSS 113 (328)
T ss_pred CEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CC-eEEEEec
Confidence 999998764322233456677889999999999888753 33 4444543
No 120
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=97.83 E-value=0.00013 Score=65.06 Aligned_cols=71 Identities=11% Similarity=0.168 Sum_probs=53.5
Q ss_pred HHHHHHhCCC-cEEEEEeecCCC-CCCCCCeEEEEeEEE-cCccEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9582 253 HIKDWIFGTE-NWVTMGIPSDGS-YNVPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324 (329)
Q Consensus 253 ~l~~~i~~~~-~i~~~~v~~~g~-ygip~~~~~s~Pv~i-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~ 324 (329)
.++++|.+|. .++.++|.++|. -++|+|.++++||+| ++|+.++.. .+|++..+++++.....-+-.++++
T Consensus 141 ~~i~~i~~~~~~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~~~e~L~veAa 214 (232)
T PF11975_consen 141 AAIEAIYNDKPKRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVKAYERLTVEAA 214 (232)
T ss_dssp HHHHHHHHSSEEEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4455668887 999999999998 799999999999999 999999877 9999999998877665555555544
No 121
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.81 E-value=0.00017 Score=65.51 Aligned_cols=97 Identities=15% Similarity=0.249 Sum_probs=63.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
|||++||. |.+|++++..|++.+... +.+|+++ |++ .++.+ .+.+. .+.+..+..++++++
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~---~~~i~v~~~r~----~~~~~----~~~~~------g~~~~~~~~e~~~~a 62 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVP---PSRISTADDSN----PARRD----VFQSL------GVKTAASNTEVVKSS 62 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCC---cceEEEEeCCC----HHHHH----HHHHc------CCEEeCChHHHHhcC
Confidence 57999998 999999999999887532 1278888 777 44332 12211 234455666778899
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
|+||++. .| +.++++.+.+..+..++.+||..++..
T Consensus 63 DvVil~v-~~---------------~~~~~vl~~l~~~~~~~~~iIs~~~g~ 98 (266)
T PLN02688 63 DVIILAV-KP---------------QVVKDVLTELRPLLSKDKLLVSVAAGI 98 (266)
T ss_pred CEEEEEE-Cc---------------HHHHHHHHHHHhhcCCCCEEEEecCCC
Confidence 9999984 11 244555555555544666666665543
No 122
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.80 E-value=6.6e-05 Score=63.81 Aligned_cols=97 Identities=18% Similarity=0.136 Sum_probs=65.3
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEE
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIA 87 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiV 87 (329)
|+|+||+|++|+.++..|++.+. +|+++-++ .+++.. ...+... ..++.-.....++++++|.|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-------~V~~~~R~----~~~~~~-~~~~~~~----~~d~~d~~~~~~al~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-------EVTALVRS----PSKAED-SPGVEII----QGDLFDPDSVKAALKGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-------EEEEEESS----GGGHHH-CTTEEEE----ESCTTCHHHHHHHHTTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCCC-------EEEEEecC----chhccc-ccccccc----eeeehhhhhhhhhhhhcchh
Confidence 78999999999999999999996 99999998 444432 0111100 01111113456789999999
Q ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 88 ILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 88 i~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
|.+.|.+.+ +...++.+.+.+++.. .. .++++|
T Consensus 65 i~~~~~~~~-----------~~~~~~~~~~a~~~~~-~~-~~v~~s 97 (183)
T PF13460_consen 65 IHAAGPPPK-----------DVDAAKNIIEAAKKAG-VK-RVVYLS 97 (183)
T ss_dssp EECCHSTTT-----------HHHHHHHHHHHHHHTT-SS-EEEEEE
T ss_pred hhhhhhhcc-----------cccccccccccccccc-cc-cceeee
Confidence 999765543 1678888888888863 44 444443
No 123
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00017 Score=66.39 Aligned_cols=167 Identities=16% Similarity=0.175 Sum_probs=93.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc-c
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA-N 85 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a-D 85 (329)
+|.|+||+|++|++++..|++.|. +|+.+|+.. ........+..... ..++-.....+.+++. |
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~~~~~~----~d~~~~~~~~~~~~~~~d 66 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGH-------DVRGLDRLR----DGLDPLLSGVEFVV----LDLTDRDLVDELAKGVPD 66 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCC-------eEEEEeCCC----ccccccccccceee----ecccchHHHHHHHhcCCC
Confidence 499999999999999999999887 899999872 22211100000000 0111112234455666 9
Q ss_pred EEEEeCCCCCCCCCCH---HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHH----HHHHH-CCCCCCCcEEE
Q psy9582 86 IAILIGSFPRKSNMER---SELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTY----ITMKS-APDLSYKNFTA 157 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~---~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~----~~~~~-~~~~~~~~i~~ 157 (329)
.||++++....++..+ .+....|+...+++++...+. .-..++..|.....-.. .+.+. .+..| ..--+
T Consensus 67 ~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p-~~~Yg 143 (314)
T COG0451 67 AVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGDPPPLPIDEDLGPPRP-LNPYG 143 (314)
T ss_pred EEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCCCCCCCcccccCCCCC-CCHHH
Confidence 9999987655433322 357889999999999999983 22244443321111000 11111 11111 11234
Q ss_pred echhHHHHHHHHHHHHhCCCCCCeeEEEEEecCC
Q psy9582 158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHS 191 (329)
Q Consensus 158 ~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~hg 191 (329)
.+-+...+.-...++..+++..-++...++|...
T Consensus 144 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~ 177 (314)
T COG0451 144 VSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGD 177 (314)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 4544444444445555577777777655677543
No 124
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.79 E-value=8.7e-05 Score=66.63 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=68.6
Q ss_pred CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeec
Q psy9582 1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHE 75 (329)
Q Consensus 1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~ 75 (329)
||++ .+++.|+||+|++|++++..|++.|. +|++++++ ++..+....++.+...... .++.-..
T Consensus 1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 69 (262)
T PRK13394 1 MMSNLNGKTAVVTGAASGIGKEIALELARAGA-------AVAIADLN----QDGANAVADEINKAGGKAIGVAMDVTNED 69 (262)
T ss_pred CcccCCCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCC----hHHHHHHHHHHHhcCceEEEEECCCCCHH
Confidence 6653 47899999999999999999999987 89999998 4333333333332210000 0110000
Q ss_pred Ccc-------cccCCccEEEEeCCCCCC-C--C---CCHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEc
Q psy9582 76 NPI-------TAFKDANIAILIGSFPRK-S--N---MERSELLAINSSI----FIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 76 ~~~-------~al~~aDiVi~~~g~~~~-~--g---~~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~t 133 (329)
... +.....|+||+++|.... + . ......+..|+.. .+.+.+.+.+.. +.+.|+++|
T Consensus 70 ~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~s 143 (262)
T PRK13394 70 AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMG 143 (262)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEc
Confidence 111 122457999999886421 1 1 1233345566665 555666662222 344555555
No 125
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.78 E-value=0.0003 Score=63.58 Aligned_cols=118 Identities=18% Similarity=0.163 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CC-c--cceEeec---
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PL-L--VDVSVHE--- 75 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~-~--~~i~~~~--- 75 (329)
++...+.|+|||+++|..+|..|+.+|. .|.|+.++ +++|+..+.++++... .. . .+++-..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-------~liLvaR~----~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~ 72 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-------NLILVARR----EDKLEALAKELEDKTGVEVEVIPADLSDPEALE 72 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc----HHHHHHHHHHHHHhhCceEEEEECcCCChhHHH
Confidence 4557999999999999999999999998 89999999 8889988888876430 00 0 1111111
Q ss_pred ----CcccccCCccEEEEeCCCCCCC------CCCHHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEc
Q psy9582 76 ----NPITAFKDANIAILIGSFPRKS------NMERSELLAINSSIF----IEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 76 ----~~~~al~~aDiVi~~~g~~~~~------g~~~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~t 133 (329)
.+.+.....|+.|..||...-. ..+-.+++.-|+-.. +.+.+.|.+. ..+-||+++
T Consensus 73 ~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~--~~G~IiNI~ 142 (265)
T COG0300 73 RLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER--GAGHIINIG 142 (265)
T ss_pred HHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCceEEEEe
Confidence 1122223689999999875321 123345666676544 4455666664 245566664
No 126
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.76 E-value=0.00017 Score=68.04 Aligned_cols=118 Identities=12% Similarity=0.062 Sum_probs=71.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccC-CccceEeecCcccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFP-LLVDVSVHENPITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~-~~~~i~~~~~~~~al~ 82 (329)
.++|.|+||+|++|++++..|++.|. +|+.+|++. .........+... ... ...++.-..+..+.++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 72 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA-------EVYGYSLDP----PTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIA 72 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC-------EEEEEeCCC----ccchhHHHHHhhcCCceEEEccCCCHHHHHHHHh
Confidence 37899999999999999999999887 899999872 2211111111100 000 0011111112233444
Q ss_pred C--ccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 83 D--ANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 83 ~--aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+ .|+||++++.+.. ...+....+..|+.....+++.+.+.. ....+|++|.
T Consensus 73 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS 127 (349)
T TIGR02622 73 EFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTS 127 (349)
T ss_pred hcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEec
Confidence 3 5999999875421 112344567889999999999887653 2335666554
No 127
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=97.76 E-value=0.0003 Score=65.33 Aligned_cols=122 Identities=12% Similarity=0.088 Sum_probs=72.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh--hhhcccCCccceEeecCcccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME--IEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d--l~~~~~~~~~~i~~~~~~~~al~ 82 (329)
+|||+|+|+ |.||+.++..|...|. +|+++++. .++++.+..+ +.-........+.......+...
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~-------~V~lv~r~----~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~ 69 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL-------PVRLILRD----RQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAE 69 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC-------CeEEEEec----hHHHHHHhhcCCeEEeeCCcceeeccCCCCccccc
Confidence 368999999 9999999999999886 89999997 3333322111 11000000011111111123456
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcEEEe
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM 158 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~ 158 (329)
..|+||++. |. .-..+..+++..+..+++.|+.+-|=++....+. ++ ++.+++.++
T Consensus 70 ~~D~viv~v----K~------------~~~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l~-~~---~~~~~v~~g 125 (305)
T PRK05708 70 PIHRLLLAC----KA------------YDAEPAVASLAHRLAPGAELLLLQNGLGSQDAVA-AR---VPHARCIFA 125 (305)
T ss_pred ccCEEEEEC----CH------------HhHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHH-Hh---CCCCcEEEE
Confidence 889999983 11 1234455667776668888888889877554443 33 344565444
No 128
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.76 E-value=0.00012 Score=67.81 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=61.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||+|||. |.+|++++..|...+. +|.+||++ .++++.. .+..... ..-..+..+.++++|
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~-------~V~~~dr~----~~~~~~l----~~~g~~~---~~s~~~~~~~~~~~d 61 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH-------DCVGYDHD----QDAVKAM----KEDRTTG---VANLRELSQRLSAPR 61 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHH----HHcCCcc---cCCHHHHHhhcCCCC
Confidence 47999998 9999999999999887 89999998 4444322 2211000 000112334567899
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
+|+++. |. ..++++++.+.....++.+||..||.
T Consensus 62 vIi~~v--p~--------------~~~~~v~~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 62 VVWVMV--PH--------------GIVDAVLEELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred EEEEEc--Cc--------------hHHHHHHHHHHhhCCCCCEEEECCCC
Confidence 999972 21 24455555666655567788888775
No 129
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.76 E-value=0.0001 Score=69.45 Aligned_cols=111 Identities=10% Similarity=0.107 Sum_probs=67.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccceE-eecCccccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVDVS-VHENPITAF 81 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~i~-~~~~~~~al 81 (329)
+||.|+||+|++|++++..|+.. +. +|+.+|+. ..... ++... ...+ ..++. -.....+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~-------~V~~~~r~----~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~ 66 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW-------EVYGMDMQ----TDRLG----DLVNHPRMHFFEGDITINKEWIEYHV 66 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC-------eEEEEeCc----HHHHH----HhccCCCeEEEeCCCCCCHHHHHHHH
Confidence 36999999999999999999875 55 89999986 22211 11110 0000 01111 001123456
Q ss_pred CCccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 82 KDANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+++|+||++++.... ...+.......|+....++++.+++. . ..+|.+|.
T Consensus 67 ~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~--~-~~~v~~SS 118 (347)
T PRK11908 67 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY--G-KHLVFPST 118 (347)
T ss_pred cCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc--C-CeEEEEec
Confidence 899999998875322 22334445677888888999988875 2 35555543
No 130
>PLN02583 cinnamoyl-CoA reductase
Probab=97.75 E-value=0.00027 Score=65.24 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=72.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA 80 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a 80 (329)
++++|.|+||+|++|++++..|++.|. +|++++++.. .........++....... ..++.-..+..++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~-------~V~~~~R~~~--~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~ 75 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGY-------TVHAAVQKNG--ETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA 75 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEEcCch--hhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH
Confidence 346899999999999999999999987 8998887510 111111111221000000 0112112234568
Q ss_pred cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
++++|.|+..++.+........+.+..|+.....+.+.+.+..... .||++|
T Consensus 76 l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~-riV~~S 127 (297)
T PLN02583 76 LKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIE-KVVFTS 127 (297)
T ss_pred HcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEec
Confidence 8999999876554322111235677889999999999888753122 444444
No 131
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.75 E-value=0.00013 Score=66.51 Aligned_cols=97 Identities=19% Similarity=0.157 Sum_probs=66.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEE
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIA 87 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiV 87 (329)
|.|+||+|++|++++..|+..+. +|+.++++. ......... .. ..+.. ....++++++|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~~~~~--~~-----~~~~~-~~~~~~~~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH-------EVTILTRSP----PAGANTKWE--GY-----KPWAP-LAESEALEGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC-------EEEEEeCCC----CCCCcccce--ee-----ecccc-cchhhhcCCCCEE
Confidence 57999999999999999999886 899999982 222111000 00 00111 2345688999999
Q ss_pred EEeCCCCCCCC-C---CHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582 88 ILIGSFPRKSN-M---ERSELLAINSSIFIEQGKALNSVA 123 (329)
Q Consensus 88 i~~~g~~~~~g-~---~~~~~~~~n~~~~~~i~~~i~~~~ 123 (329)
|++++.+...+ . ....+...|+...+.+++.+.+..
T Consensus 62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 101 (292)
T TIGR01777 62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE 101 (292)
T ss_pred EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC
Confidence 99988654322 1 233456779999999999998863
No 132
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.74 E-value=0.00011 Score=71.94 Aligned_cols=178 Identities=12% Similarity=0.165 Sum_probs=94.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccc---hh------hhHhhh---hhc---ccCCc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKA---IK------GVIMEI---EDC---IFPLL- 68 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~---~~------~~~~dl---~~~---~~~~~- 68 (329)
.+||.|+||+|++|++++..|++.|. +|+++|+......+. .. .....+ .+. ...+.
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~ 119 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRGY-------EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV 119 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence 46899999999999999999999887 899998531000000 00 000000 000 00000
Q ss_pred cceEeecCcccccC--CccEEEEeCCCCCCC-C-CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc------Cc
Q psy9582 69 VDVSVHENPITAFK--DANIAILIGSFPRKS-N-ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVG------NP 135 (329)
Q Consensus 69 ~~i~~~~~~~~al~--~aDiVi~~~g~~~~~-g-~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t------NP 135 (329)
.++.-.....++++ +.|+||++|+....+ . .+ ....+..|+.....+++.+++++ ....++.+| +|
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~ 198 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTP 198 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCC
Confidence 11211112334455 479999988653211 1 11 12345679999999999998874 444455443 21
Q ss_pred hhhHHH-HH------HHHCC--CCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582 136 VNTNTY-IT------MKSAP--DLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190 (329)
Q Consensus 136 ~~~~~~-~~------~~~~~--~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h 190 (329)
-..+.+ .+ .+.++ -..|...-+.+-+....+....++..|++..-++...|+|.+
T Consensus 199 ~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~ 262 (442)
T PLN02572 199 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR 262 (442)
T ss_pred CCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCC
Confidence 100000 00 00000 011223456565544555666677778877777766567764
No 133
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.71 E-value=0.00022 Score=65.84 Aligned_cols=64 Identities=9% Similarity=0.217 Sum_probs=47.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||. |.+|+.++..|...|. +|.+||++ .++.+. +... ....+.+..++++++|
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~-------~v~~~d~~----~~~~~~----~~~~------g~~~~~~~~e~~~~~d 60 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGY-------SLVVYDRN----PEAVAE----VIAA------GAETASTAKAVAEQCD 60 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHH----HHHC------CCeecCCHHHHHhcCC
Confidence 47999998 9999999999998886 89999998 433321 1111 1233455567889999
Q ss_pred EEEEeC
Q psy9582 86 IAILIG 91 (329)
Q Consensus 86 iVi~~~ 91 (329)
+||++.
T Consensus 61 ~vi~~v 66 (296)
T PRK11559 61 VIITML 66 (296)
T ss_pred EEEEeC
Confidence 999983
No 134
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00043 Score=61.57 Aligned_cols=123 Identities=11% Similarity=0.075 Sum_probs=69.4
Q ss_pred CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeec
Q psy9582 1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHE 75 (329)
Q Consensus 1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~ 75 (329)
||.. .+++.|+||+|.+|++++..|++.|. +|++++++ ++.+.....+++...... ..++.-..
T Consensus 1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 69 (250)
T PRK12939 1 MASNLAGKRALVTGAARGLGAAFAEALAEAGA-------TVAFNDGL----AAEARELAAALEAAGGRAHAIAADLADPA 69 (250)
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHH
Confidence 5653 48999999999999999999999887 89999887 444443333443221000 00111001
Q ss_pred Ccc-------cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582 76 NPI-------TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN 134 (329)
Q Consensus 76 ~~~-------~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN 134 (329)
+.. +.+.+.|+||+++|..... ..+ ....+..|......+.+.+.++. ...+.++++|-
T Consensus 70 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 70 SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 111 1125789999998864321 112 22334556665555555544332 12456666654
No 135
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=97.70 E-value=0.00013 Score=74.92 Aligned_cols=169 Identities=11% Similarity=0.113 Sum_probs=95.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecC-cccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHEN-PITA 80 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~-~~~a 80 (329)
+.+||.|+||+|++|++++..|+.. ++ +|+.+|++ ....... +.+....+ ..++.-..+ ..++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-------~V~~l~r~----~~~~~~~---~~~~~~~~~~gDl~d~~~~l~~~ 379 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNY-------EVYGLDIG----SDAISRF---LGHPRFHFVEGDISIHSEWIEYH 379 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCc-------EEEEEeCC----chhhhhh---cCCCceEEEeccccCcHHHHHHH
Confidence 4579999999999999999999974 66 89999987 2211100 00000000 011111111 2456
Q ss_pred cCCccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH----HHHHHHCCC---CC
Q psy9582 81 FKDANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT----YITMKSAPD---LS 151 (329)
Q Consensus 81 l~~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~----~~~~~~~~~---~~ 151 (329)
++++|+||++|+... .......+....|+....++.+.+.++. + .+|.+|... +.. ..+.+..+- -|
T Consensus 380 l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~--~~V~~SS~~-vyg~~~~~~~~E~~~~~~~~p 455 (660)
T PRK08125 380 IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K--RIIFPSTSE-VYGMCTDKYFDEDTSNLIVGP 455 (660)
T ss_pred hcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C--eEEEEcchh-hcCCCCCCCcCccccccccCC
Confidence 789999999887543 2223455677889999999999999863 3 444444321 000 001011100 01
Q ss_pred ---CCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582 152 ---YKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190 (329)
Q Consensus 152 ---~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h 190 (329)
+...-+.+-....++....++..+++...++...|+|..
T Consensus 456 ~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 456 INKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 111344444444455555566778777777766567753
No 136
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00027 Score=64.41 Aligned_cols=119 Identities=13% Similarity=0.045 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc---
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA--- 80 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a--- 80 (329)
+.++|.|+||+|++|++++..|+..|. +|++++++ .++++...............++.-..+..+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~ 71 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-------RVVGTVRS----EAARADFEALHPDRALARLLDVTDFDAIDAVVAD 71 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-------EEEEEeCC----HHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHH
Confidence 346899999999999999999999887 89999998 3333221110000000000011100111111
Q ss_pred ----cCCccEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEc
Q psy9582 81 ----FKDANIAILIGSFPRK---SNMER---SELLAINSSIFIEQGKALNSVA--SRDVKVLVVG 133 (329)
Q Consensus 81 ----l~~aDiVi~~~g~~~~---~g~~~---~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~t 133 (329)
+...|+||+++|.... ...+. ...+..|+.....+.+.+.++. ...+.+|++|
T Consensus 72 ~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iS 136 (277)
T PRK06180 72 AEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNIT 136 (277)
T ss_pred HHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 2357999999886421 11222 3346677766666655543321 1234566655
No 137
>KOG1430|consensus
Probab=97.66 E-value=0.00025 Score=66.79 Aligned_cols=123 Identities=13% Similarity=0.228 Sum_probs=77.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA 80 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a 80 (329)
|+++.++.|+||+|++|.+++..|.+.+... +|+++|.... ......+..++......+ ..++.-......|
T Consensus 1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~-----~irv~D~~~~--~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a 73 (361)
T KOG1430|consen 1 MEKKLSVLVTGGSGFLGQHLVQALLENELKL-----EIRVVDKTPT--QSNLPAELTGFRSGRVTVILGDLLDANSISNA 73 (361)
T ss_pred CCcCCEEEEECCccHHHHHHHHHHHhccccc-----EEEEeccCcc--ccccchhhhcccCCceeEEecchhhhhhhhhh
Confidence 4556899999999999999999999988533 9999999832 122222222211100011 1233333456789
Q ss_pred cCCccEEEEeCCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 81 FKDANIAILIGSFPR-KSNM-ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 81 l~~aDiVi~~~g~~~-~~g~-~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
++++ .|++++..+. .... .+......|+...+.+.+.+.+.. -+ .+|..|+
T Consensus 74 ~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~-~lIYtSs 126 (361)
T KOG1430|consen 74 FQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VK-RLIYTSS 126 (361)
T ss_pred ccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CC-EEEEecC
Confidence 9999 7777544332 2222 355566789999999999999874 33 4444443
No 138
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.66 E-value=0.00019 Score=63.96 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
-+.+++.|+||+|.+|.+++..|++.|. +|++++++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~-------~V~~~~r~ 38 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGA-------RVVVTDRN 38 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 3457999999999999999999999987 89999998
No 139
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.65 E-value=0.00072 Score=63.24 Aligned_cols=116 Identities=13% Similarity=0.110 Sum_probs=68.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCccccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPITAF 81 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~~al 81 (329)
|||.|+||+|++|++++..|++.|. +|+++|+.. .........+.+...... .++.-.....+++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 69 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVVILDNLC----NSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEIL 69 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCC----CchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHH
Confidence 4799999999999999999999886 899998651 111111111111100000 1111111122334
Q ss_pred C--CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 82 K--DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 82 ~--~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+ ++|+||++++..... .....+.+..|+.....+++.+++.. .. .+|.+|.
T Consensus 70 ~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss 124 (338)
T PRK10675 70 HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VK-NLIFSSS 124 (338)
T ss_pred hcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEecc
Confidence 3 589999988754311 12345677889999999999888763 33 4555543
No 140
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.65 E-value=0.00028 Score=66.72 Aligned_cols=117 Identities=10% Similarity=0.026 Sum_probs=67.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~ 82 (329)
.+||.|+||+|++|++++..|++.|. +|++++++ .........++.... ..+ ..++.-.....++++
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGY-------TVHATLRD----PAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK 78 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc
Confidence 47999999999999999999999887 89988876 222221111111100 000 011111122345677
Q ss_pred CccEEEEeCCCCCCC---C-CCHH-----HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 83 DANIAILIGSFPRKS---N-MERS-----ELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~---g-~~~~-----~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+.|+||++|+..... . .+.. ..+..|+.....+.+.+.+.. .-..+|++|
T Consensus 79 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~S 137 (353)
T PLN02896 79 GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTS 137 (353)
T ss_pred CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEe
Confidence 899999998764211 1 1222 233444577788888877652 122455544
No 141
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.64 E-value=0.00079 Score=62.56 Aligned_cols=95 Identities=20% Similarity=0.176 Sum_probs=59.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|..++..|...+... +|.++|++ .+.++. . ... .. ......+..+++++||
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~-----~V~~~dr~----~~~~~~-a---~~~--g~--~~~~~~~~~~~~~~aD 68 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAG-----EIVGADRS----AETRAR-A---REL--GL--GDRVTTSAAEAVKGAD 68 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCc-----EEEEEECC----HHHHHH-H---HhC--CC--CceecCCHHHHhcCCC
Confidence 68999998 999999999999887532 79999998 433321 1 111 11 1122344567789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+||++... ....++.+.+..+.+++++|+.++.
T Consensus 69 vViiavp~----------------~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 69 LVILCVPV----------------GASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred EEEECCCH----------------HHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 99998422 1223444455555456766655543
No 142
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.64 E-value=0.00043 Score=63.40 Aligned_cols=101 Identities=15% Similarity=0.195 Sum_probs=64.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|++++..|...+.+.. .+|.+++++. .++++ .+... + ..+.++.+..+.++++|
T Consensus 2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~---~~V~~~~r~~---~~~~~----~l~~~---~-~~~~~~~~~~e~~~~aD 66 (277)
T PRK06928 2 EKIGFIGY-GSMADMIATKLLETEVATP---EEIILYSSSK---NEHFN----QLYDK---Y-PTVELADNEAEIFTKCD 66 (277)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCc---ccEEEEeCCc---HHHHH----HHHHH---c-CCeEEeCCHHHHHhhCC
Confidence 36999998 9999999999998873321 1799999871 22222 12111 1 12344556667789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
+||++.. . ..++++++.+..+..++..||.+.|-++
T Consensus 67 vVilavp--p--------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~ 102 (277)
T PRK06928 67 HSFICVP--P--------------LAVLPLLKDCAPVLTPDRHVVSIAAGVS 102 (277)
T ss_pred EEEEecC--H--------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 9999732 1 3455666666665445666677766543
No 143
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00029 Score=62.24 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=67.4
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN 76 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~ 76 (329)
||. +.++|.|+||+|.+|++++..|+..|. +|++++++ .+++.....++.... .. ..++.-..+
T Consensus 1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~-------~V~~~~r~----~~~~~~~~~~l~~~~-~~~~~~~D~~~~~~ 68 (237)
T PRK07326 1 MMSLKGKVALITGGSKGIGFAIAEALLAEGY-------KVAITARD----QKELEEAAAELNNKG-NVLGLAADVRDEAD 68 (237)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEeeCC----HHHHHHHHHHHhccC-cEEEEEccCCCHHH
Confidence 554 347899999999999999999998876 89999998 444433333332210 00 001100011
Q ss_pred cc-------cccCCccEEEEeCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcCc
Q psy9582 77 PI-------TAFKDANIAILIGSFPRKS---NMERS---ELLAINSSIFIEQGKALNSVA-SRDVKVLVVGNP 135 (329)
Q Consensus 77 ~~-------~al~~aDiVi~~~g~~~~~---g~~~~---~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tNP 135 (329)
.. +.+...|+||+++|..... ..+.. +.+..|+.....+.+.+.+.. ...+.+++++..
T Consensus 69 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 69 VQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 11 1234789999988754321 12222 334555554444444433221 134566666653
No 144
>PRK06194 hypothetical protein; Provisional
Probab=97.63 E-value=0.00063 Score=62.08 Aligned_cols=160 Identities=13% Similarity=0.024 Sum_probs=83.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITAF 81 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~al 81 (329)
.+++.|+||+|++|++++..|+..|. +|+++|++ .+.++....++....... ..++.-..+..+++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 74 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-------KLVLADVQ----QDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALA 74 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 46899999999999999999999987 89999998 444444433433211000 01111111122222
Q ss_pred C-------CccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCC----CeEEEEEcCchhhHH
Q psy9582 82 K-------DANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASR----DVKVLVVGNPVNTNT 140 (329)
Q Consensus 82 ~-------~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p----~a~viv~tNP~~~~~ 140 (329)
+ ..|+||+.+|..... ..+ ....+..|+.....+ .+.+.+.+.+ .+.+++++--....
T Consensus 75 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~- 153 (287)
T PRK06194 75 DAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL- 153 (287)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-
Confidence 2 469999998864321 112 223355666544444 4445554321 14555554422211
Q ss_pred HHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582 141 YITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV 184 (329)
Q Consensus 141 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~ 184 (329)
+.+..-..+.+-.-...+...++..++.....++..
T Consensus 154 --------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~ 189 (287)
T PRK06194 154 --------APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGAS 189 (287)
T ss_pred --------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 111111223333223345566677777666666643
No 145
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.62 E-value=0.00024 Score=69.75 Aligned_cols=97 Identities=13% Similarity=0.144 Sum_probs=65.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---C
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK---D 83 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~---~ 83 (329)
+|+|||. |.+|+++|..|+..|. +|++||++ .++.+.......... ..+..+.+..+.++ +
T Consensus 3 ~IgvIGL-G~MG~~lA~nL~~~G~-------~V~v~dr~----~~~~~~l~~~~~~~g----~~i~~~~s~~e~v~~l~~ 66 (470)
T PTZ00142 3 DIGLIGL-AVMGQNLALNIASRGF-------KISVYNRT----YEKTEEFVKKAKEGN----TRVKGYHTLEELVNSLKK 66 (470)
T ss_pred EEEEEeE-hHHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHhhhhcC----CcceecCCHHHHHhcCCC
Confidence 7999998 9999999999999998 89999999 554443221111101 12344555555554 5
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+|+|+++... .+.++++.+.+..+..++.+||..+|
T Consensus 67 ~d~Iil~v~~---------------~~~v~~vi~~l~~~L~~g~iIID~gn 102 (470)
T PTZ00142 67 PRKVILLIKA---------------GEAVDETIDNLLPLLEKGDIIIDGGN 102 (470)
T ss_pred CCEEEEEeCC---------------hHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 8988876211 14566666666666667888888887
No 146
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00025 Score=63.00 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=69.3
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP 77 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~ 77 (329)
||-+.+++.|+||+|.+|++++..|++.|. ++++...+. ....+....++....... ..++.-..+.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 70 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGF-------AVAVNYAGS---AAAADELVAEIEAAGGRAIAVQADVADAAAV 70 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCC---HHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 666778999999999999999999999987 788877651 222222222222211000 0011101111
Q ss_pred ccc-------cCCccEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 78 ITA-------FKDANIAILIGSFPRKS------NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 78 ~~a-------l~~aDiVi~~~g~~~~~------g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.++ +...|+||+.+|..... .+.....+..|+.....+.+.+.+...+.+.++++|-
T Consensus 71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 71 TRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 222 34689999998864211 1123334566766665655555444334456666653
No 147
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.61 E-value=0.00036 Score=63.77 Aligned_cols=93 Identities=12% Similarity=0.142 Sum_probs=63.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||++||- |.+|+.+|..|+..|+ ++++||++ .++... .+.... .....+..++.++||
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~-------~v~v~~r~----~~ka~~---~~~~~G------a~~a~s~~eaa~~aD 59 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH-------EVTVYNRT----PEKAAE---LLAAAG------ATVAASPAEAAAEAD 59 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC-------EEEEEeCC----hhhhhH---HHHHcC------CcccCCHHHHHHhCC
Confidence 48999998 9999999999999998 99999999 444321 222211 122344578999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHhhhcCCCeEEEEEcC
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGK---ALNSVASRDVKVLVVGN 134 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~---~i~~~~~p~a~viv~tN 134 (329)
+||.+-. |-+.++++.. -+.+..+|.+++|..|+
T Consensus 60 vVitmv~---------------~~~~V~~V~~g~~g~~~~~~~G~i~IDmST 96 (286)
T COG2084 60 VVITMLP---------------DDAAVRAVLFGENGLLEGLKPGAIVIDMST 96 (286)
T ss_pred EEEEecC---------------CHHHHHHHHhCccchhhcCCCCCEEEECCC
Confidence 9999732 2245555542 23333457778888775
No 148
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.61 E-value=0.00026 Score=65.28 Aligned_cols=63 Identities=11% Similarity=0.196 Sum_probs=46.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI 86 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi 86 (329)
||+|||. |.+|+.++..|+..|. +|++||++ .++++. +.+.. .....+..+++++||+
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~-------~V~~~dr~----~~~~~~----~~~~g------~~~~~~~~~~~~~aDi 58 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY-------QLHVTTIG----PEVADE----LLAAG------AVTAETARQVTEQADV 58 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHH----HHHCC------CcccCCHHHHHhcCCE
Confidence 5999998 9999999999999887 89999998 444332 22211 1122455688999999
Q ss_pred EEEeC
Q psy9582 87 AILIG 91 (329)
Q Consensus 87 Vi~~~ 91 (329)
||++.
T Consensus 59 vi~~v 63 (291)
T TIGR01505 59 IFTMV 63 (291)
T ss_pred EEEec
Confidence 99983
No 149
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.60 E-value=0.00038 Score=64.92 Aligned_cols=107 Identities=12% Similarity=0.078 Sum_probs=69.4
Q ss_pred hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc------cchhhhHhh-hh---hcc-------cCCccceEeecC--c
Q psy9582 17 IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ------KAIKGVIME-IE---DCI-------FPLLVDVSVHEN--P 77 (329)
Q Consensus 17 vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~------~~~~~~~~d-l~---~~~-------~~~~~~i~~~~~--~ 77 (329)
+|+.+|..++..|+ +|+|+|.+.+..+ ++....... +. ... .....+++++++ .
T Consensus 1 MG~giA~~~a~~G~-------~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 73 (314)
T PRK08269 1 MGQGIALAFAFAGH-------DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGA 73 (314)
T ss_pred CcHHHHHHHHhCCC-------eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcch
Confidence 58899999999998 9999999931100 001111111 10 000 011246777654 5
Q ss_pred ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHH
Q psy9582 78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKS 146 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~ 146 (329)
++++++||+||.+ +.++..+.+.+...+.+.++|++++ +||...+....+.+.
T Consensus 74 ~~a~~~aD~ViEa--------------v~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~la~~ 126 (314)
T PRK08269 74 ADALADADLVFEA--------------VPEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDLQRH 126 (314)
T ss_pred HHHhccCCEEEEC--------------CcCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHHHhh
Confidence 6889999999998 3456678888888899999888775 888776554444443
No 150
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.60 E-value=0.00031 Score=66.09 Aligned_cols=121 Identities=12% Similarity=0.043 Sum_probs=67.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-cccchhhhHhhhhh---cccCC-ccceEeecCcccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-SQKAIKGVIMEIED---CIFPL-LVDVSVHENPITA 80 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~---~~~~~-~~~i~~~~~~~~a 80 (329)
++|.|+||+|++|++++..|++.|. +|+++|++... ..+.+.....+... ....+ ..+++-.....++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~ 73 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-------EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI 73 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-------EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH
Confidence 4899999999999999999999887 89999987210 00111111000000 00000 0111111223345
Q ss_pred cCC--ccEEEEeCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhcCC-CeEEEEEc
Q psy9582 81 FKD--ANIAILIGSFPRKS-N-MERSELLAINSSIFIEQGKALNSVASR-DVKVLVVG 133 (329)
Q Consensus 81 l~~--aDiVi~~~g~~~~~-g-~~~~~~~~~n~~~~~~i~~~i~~~~~p-~a~viv~t 133 (329)
+++ .|+||++|+..... . ......+..|+.....+++.+.+..-. ...++.+|
T Consensus 74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~S 131 (343)
T TIGR01472 74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQAS 131 (343)
T ss_pred HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEec
Confidence 564 59999998864321 1 122344566777888888888775312 23455544
No 151
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.60 E-value=0.00021 Score=63.18 Aligned_cols=38 Identities=24% Similarity=0.325 Sum_probs=33.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
|+.+.++|.|+||+|.+|..++..|++.|. +|.+++++
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~v~~~~r~ 38 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGA-------KVVIYDSN 38 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 444557999999999999999999999887 89999998
No 152
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.59 E-value=0.00051 Score=58.09 Aligned_cols=105 Identities=17% Similarity=0.179 Sum_probs=65.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||+||||+|.+|+.++....++|+ ||+-+-++ ..++... .++. -.-.++.-.+...+++.|-|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH-------eVTAivRn----~~K~~~~-~~~~----i~q~Difd~~~~a~~l~g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH-------EVTAIVRN----ASKLAAR-QGVT----ILQKDIFDLTSLASDLAGHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC-------eeEEEEeC----hHhcccc-ccce----eecccccChhhhHhhhcCCc
Confidence 6999999999999999999999998 99999998 4444321 0000 00012221233457899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+||.+-|.+. ++.. ..-.+..+.+...++... ...+++++-
T Consensus 65 aVIsA~~~~~-~~~~-----~~~~k~~~~li~~l~~ag--v~RllVVGG 105 (211)
T COG2910 65 AVISAFGAGA-SDND-----ELHSKSIEALIEALKGAG--VPRLLVVGG 105 (211)
T ss_pred eEEEeccCCC-CChh-----HHHHHHHHHHHHHHhhcC--CeeEEEEcC
Confidence 9999765442 1211 112233555666666643 456667653
No 153
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.59 E-value=0.00039 Score=63.25 Aligned_cols=153 Identities=12% Similarity=0.099 Sum_probs=89.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeecCcccccC--
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHENPITAFK-- 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~~~~~al~-- 82 (329)
++|.|+|++|.|||+.+..|++.|. +++++|.......+.+.. .+ .++. .++.-..-+.+.++
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-------~vvV~DNL~~g~~~~v~~----~~---~~f~~gDi~D~~~L~~vf~~~ 66 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH-------EVVVLDNLSNGHKIALLK----LQ---FKFYEGDLLDRALLTAVFEEN 66 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC-------eEEEEecCCCCCHHHhhh----cc---CceEEeccccHHHHHHHHHhc
Confidence 5899999999999999999999998 999999872111111111 00 0110 11111111222222
Q ss_pred CccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-----CchhhHHHHHHHHCCCCCCCcE
Q psy9582 83 DANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-----NPVNTNTYITMKSAPDLSYKNF 155 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-----NP~~~~~~~~~~~~~~~~~~~i 155 (329)
.-|.||+.|+...-.. +....+...|+--...+.+.|.+.. .+.+|.-.| +|..+ + +.+.+ -..|.+=
T Consensus 67 ~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~--P-I~E~~-~~~p~NP 141 (329)
T COG1087 67 KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTS--P-ISETS-PLAPINP 141 (329)
T ss_pred CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCc--c-cCCCC-CCCCCCc
Confidence 5788999887643221 3456778899999999999999986 665544332 44331 0 11222 1223333
Q ss_pred EEechhHHHHHHHHHHHHhCCC
Q psy9582 156 TAMLRLDHNRAIAKLASKLNEP 177 (329)
Q Consensus 156 ~~~t~lds~r~~~~la~~l~~~ 177 (329)
-|-|-|-+.++.+-+++..+..
T Consensus 142 YG~sKlm~E~iL~d~~~a~~~~ 163 (329)
T COG1087 142 YGRSKLMSEEILRDAAKANPFK 163 (329)
T ss_pred chhHHHHHHHHHHHHHHhCCCc
Confidence 4555555556666666665544
No 154
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.59 E-value=0.00031 Score=63.04 Aligned_cols=123 Identities=16% Similarity=0.199 Sum_probs=69.6
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc--
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-- 77 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-- 77 (329)
||+ ..+++.|+||+|.+|.+++..|++.|. +|+++|++ .+.+.....++.........++.-..+.
T Consensus 1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (257)
T PRK07067 1 MMRLQGKVALLTGAASGIGEAVAERYLAEGA-------RVVIADIK----PARARLAALEIGPAAIAVSLDVTRQDSIDR 69 (257)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEcCC----HHHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence 664 356899999999999999999999987 89999998 4444333222221100000011100111
Q ss_pred -----ccccCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcC
Q psy9582 78 -----ITAFKDANIAILIGSFPRK-S--NM---ERSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGN 134 (329)
Q Consensus 78 -----~~al~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tN 134 (329)
.+.+...|++|+++|.... + .. .....+..|+.....+.+.+.++. ...+.|++++-
T Consensus 70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 140 (257)
T PRK07067 70 IVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS 140 (257)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 1223468999998875421 1 11 233445667666656655554321 13456666654
No 155
>KOG1429|consensus
Probab=97.58 E-value=0.00013 Score=65.63 Aligned_cols=112 Identities=16% Similarity=0.150 Sum_probs=70.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+||+|+|||+++-.|+..+. +|...|..- . +....+.+........+..+.-...-++++
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh-------~VIa~Dn~f----t---g~k~n~~~~~~~~~fel~~hdv~~pl~~ev 92 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGH-------EVIALDNYF----T---GRKENLEHWIGHPNFELIRHDVVEPLLKEV 92 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCC-------eEEEEeccc----c---cchhhcchhccCcceeEEEeechhHHHHHh
Confidence 47999999999999999999999886 999999872 1 222233333211122344444445678899
Q ss_pred cEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 85 NIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 85 DiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
|-|++.|.....++ .+..+.+..|.-.+.......++. ++.++.+|
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv---~aR~l~aS 140 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV---GARFLLAS 140 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh---CceEEEee
Confidence 99999765433222 233334455655666666666654 35666555
No 156
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.57 E-value=0.00052 Score=60.72 Aligned_cols=116 Identities=16% Similarity=0.172 Sum_probs=79.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCCccceEee-------cCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPLLVDVSVH-------ENP 77 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~~~~i~~~-------~~~ 77 (329)
+-+.|+|||+++|.++|..|.+.|. .|+|..++ .++++..+.++.+. ..+...+++-. ...
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~-------~vvl~aRR----~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~ 75 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA-------KVVLAARR----EERLEALADEIGAGAALALALDVTDRAAVEAAIEAL 75 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecc----HHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHH
Confidence 4578999999999999999999998 89999999 88888887777641 11111112111 123
Q ss_pred ccccCCccEEEEeCCCCCCCC------CCHHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582 78 ITAFKDANIAILIGSFPRKSN------MERSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g------~~~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN 134 (329)
.+.+...|++|.-||...-.. .++..+++.|+..+.. +.+.|.+. ..+-||+.+-
T Consensus 76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r--~~G~IiN~~S 140 (246)
T COG4221 76 PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER--KSGHIINLGS 140 (246)
T ss_pred HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc--CCceEEEecc
Confidence 456778999999988754211 2466778888875544 55666664 3557777653
No 157
>PRK05717 oxidoreductase; Validated
Probab=97.57 E-value=0.00021 Score=64.10 Aligned_cols=118 Identities=14% Similarity=0.144 Sum_probs=66.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------c
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-------I 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-------~ 78 (329)
+++.|+||+|++|++++..|+..|. +|+++|++ .++......++.........++.-..+. .
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~-------~v~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW-------QVVLADLD----RERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVL 79 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCC-------EEEEEcCC----HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 6799999999999999999999886 89999987 3322221111111000000011100111 1
Q ss_pred cccCCccEEEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q psy9582 79 TAFKDANIAILIGSFPRKS-----NME---RSELLAINSSIFIEQGKALNSVA-SRDVKVLVVGN 134 (329)
Q Consensus 79 ~al~~aDiVi~~~g~~~~~-----g~~---~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tN 134 (329)
+.+...|++|+.+|..... ..+ ....+..|+.....+.+.+.++. ...+.+|++|-
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS 144 (255)
T PRK05717 80 GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLAS 144 (255)
T ss_pred HHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcc
Confidence 1123579999998865321 112 23456677776666666665431 12345666653
No 158
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.57 E-value=0.00024 Score=57.81 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
+..++.|+|| |.+|..++..|...|.- +|++++++ .++++..+..+... ...+....+..+.+.+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~------~i~i~nRt----~~ra~~l~~~~~~~----~~~~~~~~~~~~~~~~ 75 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAK------EITIVNRT----PERAEALAEEFGGV----NIEAIPLEDLEEALQE 75 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSS------EEEEEESS----HHHHHHHHHHHTGC----SEEEEEGGGHCHHHHT
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCC------EEEEEECC----HHHHHHHHHHcCcc----ccceeeHHHHHHHHhh
Confidence 3579999999 99999999999999873 79999999 66666554444211 1122223456678899
Q ss_pred ccEEEEeCCCC
Q psy9582 84 ANIAILIGSFP 94 (329)
Q Consensus 84 aDiVi~~~g~~ 94 (329)
+|+||.+.+.+
T Consensus 76 ~DivI~aT~~~ 86 (135)
T PF01488_consen 76 ADIVINATPSG 86 (135)
T ss_dssp ESEEEE-SSTT
T ss_pred CCeEEEecCCC
Confidence 99999985544
No 159
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.56 E-value=0.00034 Score=62.54 Aligned_cols=120 Identities=16% Similarity=0.171 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP 77 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~ 77 (329)
||+ .++|.|+||+|.+|.+++..|+..|. +|++++++ .+.+.....++....... ..++.-..+.
T Consensus 1 ~~~-~~~vlItG~sg~iG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 68 (258)
T PRK12429 1 MLK-GKVALVTGAASGIGLEIALALAKEGA-------KVVIADLN----DEAAAAAAEALQKAGGKAIGVAMDVTDEEAI 68 (258)
T ss_pred CCC-CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence 454 47999999999999999999999887 89999998 444443333443211000 0011101111
Q ss_pred -------ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 78 -------ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 78 -------~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.+.+.+.|+||++++...... .+ ....+..|+.. .+.+.+.+++. +...|+++|.
T Consensus 69 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~iss 140 (258)
T PRK12429 69 NAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ--GGGRIINMAS 140 (258)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc--CCeEEEEEcc
Confidence 112346899999887543211 11 12233445444 56666666654 2345555543
No 160
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=97.56 E-value=0.00052 Score=63.80 Aligned_cols=124 Identities=23% Similarity=0.184 Sum_probs=77.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||+|+|+ |.+|+.++..|.+.|. .|.++-+++ ..+++...-+.+.+..... .....+....+.+..+|
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~-------~V~~~~R~~--~~~~l~~~GL~i~~~~~~~-~~~~~~~~~~~~~~~~D 69 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH-------DVTLLVRSR--RLEALKKKGLRIEDEGGNF-TTPVVAATDAEALGPAD 69 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC-------eEEEEecHH--HHHHHHhCCeEEecCCCcc-ccccccccChhhcCCCC
Confidence 68999999 9999999999999983 677777761 0122221112222211100 11222333456778999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHHHHHHCCCCCCCcE-EEech
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNF-TAMLR 160 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~ 160 (329)
+||++. |. -...+..+.+..+.+++++|+..-|=.+..- .+.+.. +.+++ .|.|.
T Consensus 70 lviv~v----Ka------------~q~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~~---~~~~il~G~~~ 125 (307)
T COG1893 70 LVIVTV----KA------------YQLEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKIL---PKETVLGGVTT 125 (307)
T ss_pred EEEEEe----cc------------ccHHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHhC---CcceEEEEEee
Confidence 999983 21 2455667788888878889888889887766 555544 34454 44444
No 161
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.55 E-value=0.00045 Score=63.84 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=65.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~ 83 (329)
|||.|+||+|++|++++..|+..| +|+.+|+. ... ...|+.+. ....++++ +
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~----~~~---~~~Dl~d~-----------~~~~~~~~~~~ 54 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVH----STD---YCGDFSNP-----------EGVAETVRKIR 54 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEeccc----ccc---ccCCCCCH-----------HHHHHHHHhcC
Confidence 479999999999999999998776 47777776 211 11233321 11234454 5
Q ss_pred ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
.|+||++++..... ..........|+.....+++.+.+.. ..+|.+|
T Consensus 55 ~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~S 103 (299)
T PRK09987 55 PDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYS 103 (299)
T ss_pred CCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEc
Confidence 89999998754321 12233445689999999999998863 3455544
No 162
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00046 Score=62.28 Aligned_cols=118 Identities=10% Similarity=0.056 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP------- 77 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~------- 77 (329)
.+++.|+||+|.+|.+++..|++.|. +|.+.|++ .+.++....++.........++.-..+.
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGA-------RVAIVDID----ADNGAAVAASLGERARFIATDITDDAAIERAVATV 74 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHH
Confidence 47999999999999999999999987 89999998 3333322222211000000011101111
Q ss_pred ccccCCccEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEc
Q psy9582 78 ITAFKDANIAILIGSFPRKS--NME---RSELLAINSSIFIEQGKALNSVA-SRDVKVLVVG 133 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~t 133 (329)
.+.+...|++|+.+|..... ..+ ....+..|+.....+.+.+.+.. ++.+.||+++
T Consensus 75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is 136 (261)
T PRK08265 75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT 136 (261)
T ss_pred HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 12234679999998864321 122 22334456654444444333322 2345666665
No 163
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.53 E-value=0.0005 Score=64.58 Aligned_cols=91 Identities=18% Similarity=0.192 Sum_probs=59.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||. |.+|+.+|..|...|. +|..||++ .+... +. .....++.+++++|
T Consensus 146 g~~VgIIG~-G~IG~~vA~~L~~~G~-------~V~~~d~~----~~~~~----~~----------~~~~~~l~ell~~a 199 (330)
T PRK12480 146 NMTVAIIGT-GRIGAATAKIYAGFGA-------TITAYDAY----PNKDL----DF----------LTYKDSVKEAIKDA 199 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEeCC----hhHhh----hh----------hhccCCHHHHHhcC
Confidence 468999998 9999999999998776 89999998 22111 00 11234567899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
|+|+++..... .+...+ .+.+-...++++++|+++-=
T Consensus 200 DiVil~lP~t~-----------~t~~li---~~~~l~~mk~gavlIN~aRG 236 (330)
T PRK12480 200 DIISLHVPANK-----------ESYHLF---DKAMFDHVKKGAILVNAARG 236 (330)
T ss_pred CEEEEeCCCcH-----------HHHHHH---hHHHHhcCCCCcEEEEcCCc
Confidence 99999732211 111121 12222334588999999853
No 164
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00027 Score=62.94 Aligned_cols=119 Identities=17% Similarity=0.117 Sum_probs=66.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc---
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI--- 78 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~--- 78 (329)
++++.|+||+|++|.+++..|+..|. +|++++++. .+.++....++....... ..++.-..+..
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~-------~V~~~~r~~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 75 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGA-------HVVVNYRQK---APRANKVVAEIEAAGGRASAVGADLTDEESVAALM 75 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCc---hHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 46899999999999999999998887 898888862 122222222232211000 01111111111
Q ss_pred ----cccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 79 ----TAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 79 ----~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+.+.+.|+||+.++.......+....+..|......+++.+.++....+.++++|
T Consensus 76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is 134 (248)
T PRK07806 76 DTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT 134 (248)
T ss_pred HHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence 1224679999987653221222223345566666667777666543344555554
No 165
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.52 E-value=0.00028 Score=56.29 Aligned_cols=74 Identities=20% Similarity=0.264 Sum_probs=44.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI 86 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi 86 (329)
||+|+||+|.+|+.++..|.....+. -+.+++.. .. .|....-.........++.+.....+.+.++|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e-----~~~~~~~~----~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 69 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFE-----LVALVSSS----RS--AGKPLSEVFPHPKGFEDLSVEDADPEELSDVDV 69 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEE-----EEEEEEST----TT--TTSBHHHTTGGGTTTEEEBEEETSGHHHTTESE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCcc-----EEEeeeec----cc--cCCeeehhccccccccceeEeecchhHhhcCCE
Confidence 79999999999999999999866552 45555555 10 111111111100112344454444678899999
Q ss_pred EEEeC
Q psy9582 87 AILIG 91 (329)
Q Consensus 87 Vi~~~ 91 (329)
||.+.
T Consensus 70 vf~a~ 74 (121)
T PF01118_consen 70 VFLAL 74 (121)
T ss_dssp EEE-S
T ss_pred EEecC
Confidence 99983
No 166
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00067 Score=60.77 Aligned_cols=121 Identities=19% Similarity=0.082 Sum_probs=69.7
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecC
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHEN 76 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~ 76 (329)
||. +.+++.|+||+|.+|.+++..|++.|. +|.+.+++ .+.++....++.+...... .++.-..+
T Consensus 1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 69 (254)
T PRK07478 1 MMRLNGKVAIITGASSGIGRAAAKLFAREGA-------KVVVGARR----QAELDQLVAEIRAEGGEAVALAGDVRDEAY 69 (254)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHH
Confidence 564 346899999999999999999999887 89999998 4444444444432210000 01110011
Q ss_pred cc-------cccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 77 PI-------TAFKDANIAILIGSFPR--KS--NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 77 ~~-------~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.. +.+...|++|..+|... .+ ..+ ....+..|+. ..+.+.+.+.+. ..+.|++++.
T Consensus 70 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~~~iv~~sS 143 (254)
T PRK07478 70 AKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR--GGGSLIFTST 143 (254)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEec
Confidence 11 12336799999988632 22 122 2344566664 444555555553 3445666654
No 167
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.51 E-value=0.0004 Score=65.20 Aligned_cols=112 Identities=9% Similarity=-0.010 Sum_probs=65.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcc-cccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKK-SQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a 80 (329)
.++|.|+||+|++|++++..|+..|. +|+++|++... ....++....+........ ..++.-..+..++
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 78 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGY-------EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW 78 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC-------EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHH
Confidence 47899999999999999999999987 89999886210 0011211110000000000 0111111122334
Q ss_pred cCC--ccEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582 81 FKD--ANIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVA 123 (329)
Q Consensus 81 l~~--aDiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~ 123 (329)
+++ .|+||++|+...... ......+..|+.....+++.+.+..
T Consensus 79 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~ 125 (340)
T PLN02653 79 LDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG 125 (340)
T ss_pred HHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc
Confidence 543 599999988643211 1233445778888899999888764
No 168
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=97.50 E-value=0.0004 Score=63.93 Aligned_cols=173 Identities=13% Similarity=0.116 Sum_probs=90.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccCC-
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFKD- 83 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~~- 83 (329)
||.|+||+|++|++++..|++.+.-. +|+++|+... ..... ...++.... ..+ ..++.-..+..+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~-----~v~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA-----EVIVLDKLTY--AGNLE-NLADLEDNPRYRFVKGDIGDRELVSRLFTEH 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC-----EEEEecCCCc--chhhh-hhhhhccCCCcEEEEcCCcCHHHHHHHHhhc
Confidence 58999999999999999998865211 7888886410 01111 111111100 000 0112111233455666
Q ss_pred -ccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch-----hhHHHHHHHHCCCCCCCcE
Q psy9582 84 -ANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV-----NTNTYITMKSAPDLSYKNF 155 (329)
Q Consensus 84 -aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~-----~~~~~~~~~~~~~~~~~~i 155 (329)
+|+||++++.... ........+..|+.....+++.+.+.. .+..++.+|-.. ..... ..+.. ...+...
T Consensus 73 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~-~~e~~-~~~~~~~ 149 (317)
T TIGR01181 73 QPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDA-FTETT-PLAPSSP 149 (317)
T ss_pred CCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCC-cCCCC-CCCCCCc
Confidence 8999998875321 122344567789999999999888763 454566554311 00000 11111 1122222
Q ss_pred EEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582 156 TAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190 (329)
Q Consensus 156 ~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h 190 (329)
.+.+-....++...++...+++..-++...++|..
T Consensus 150 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 150 YSASKAASDHLVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 33333333444445566667766556655556643
No 169
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.50 E-value=0.00062 Score=63.04 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=59.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC--
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD-- 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~-- 83 (329)
+||++||. |.+|++++..|...+. +|++||++ .++++. +.+. ......+..+.+++
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~-------~v~v~dr~----~~~~~~----~~~~------g~~~~~s~~~~~~~~~ 58 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH-------EVVGYDVN----QEAVDV----AGKL------GITARHSLEELVSKLE 58 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHH----HHHC------CCeecCCHHHHHHhCC
Confidence 37999998 9999999999999886 89999998 444332 2221 12233444455544
Q ss_pred -ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 84 -ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 84 -aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+|+||++...+ +.+++++..+....+++.++|..|+
T Consensus 59 ~advVi~~vp~~---------------~~~~~v~~~i~~~l~~g~ivid~st 95 (299)
T PRK12490 59 APRTIWVMVPAG---------------EVTESVIKDLYPLLSPGDIVVDGGN 95 (299)
T ss_pred CCCEEEEEecCc---------------hHHHHHHHHHhccCCCCCEEEECCC
Confidence 69999873211 2344444455444446778888864
No 170
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.50 E-value=0.00037 Score=62.32 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=30.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
|+|.|+||+|++|..++..|+..|. +|.+++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~ 33 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRR 33 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECC
Confidence 4799999999999999999999887 89999998
No 171
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.50 E-value=0.0015 Score=62.24 Aligned_cols=76 Identities=20% Similarity=0.297 Sum_probs=50.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||.|||| |+||+.+|..|++++- + +|++.|++ .+++...............-++.-...+.+.+++.|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d-~-----~V~iAdRs----~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD-G-----EVTIADRS----KEKCARIAELIGGKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC-c-----eEEEEeCC----HHHHHHHHhhccccceeEEecccChHHHHHHHhcCC
Confidence 57999999 9999999999999875 2 89999999 444443322110000000012222235678899999
Q ss_pred EEEEeCC
Q psy9582 86 IAILIGS 92 (329)
Q Consensus 86 iVi~~~g 92 (329)
+||.++.
T Consensus 71 ~VIn~~p 77 (389)
T COG1748 71 LVINAAP 77 (389)
T ss_pred EEEEeCC
Confidence 9999854
No 172
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=97.49 E-value=0.00079 Score=61.08 Aligned_cols=91 Identities=15% Similarity=0.262 Sum_probs=59.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|++++..|...+.+..+ +++.+|++ .+++ .+....+..+.++++|
T Consensus 4 mkI~iIG~-G~mG~ai~~~l~~~~~~~~~---~i~~~~~~----~~~~----------------~~~~~~~~~~~~~~~D 59 (260)
T PTZ00431 4 IRVGFIGL-GKMGSALAYGIENSNIIGKE---NIYYHTPS----KKNT----------------PFVYLQSNEELAKTCD 59 (260)
T ss_pred CEEEEECc-cHHHHHHHHHHHhCCCCCcc---eEEEECCC----hhcC----------------CeEEeCChHHHHHhCC
Confidence 78999998 99999999999988754322 68888887 3221 0122345566788999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
+||++ ++. ..++++.+.+..+.++ ..+|...+-+.
T Consensus 60 ~Vila--vkp--------------~~~~~vl~~i~~~l~~-~~iIS~~aGi~ 94 (260)
T PTZ00431 60 IIVLA--VKP--------------DLAGKVLLEIKPYLGS-KLLISICGGLN 94 (260)
T ss_pred EEEEE--eCH--------------HHHHHHHHHHHhhccC-CEEEEEeCCcc
Confidence 99997 221 3556666666655323 34455554443
No 173
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.48 E-value=0.0013 Score=62.58 Aligned_cols=94 Identities=18% Similarity=0.178 Sum_probs=58.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
.||+|||. |.||.+++..|...|. ++.++|.+ .+... ..... ...... ..+++..+++++||
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~-------~v~i~~~~----~~~~~-~~~a~---~~~~~~--~~~~~~~~~~~~aD 62 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP-------DVFIIGYD----PSAAQ-LARAL---GFGVID--ELAADLQRAAAEAD 62 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC-------CeEEEEeC----CCHHH-HHHHh---cCCCCc--ccccCHHHHhcCCC
Confidence 47999998 9999999999999887 78899988 32221 11111 101111 13345667889999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEc
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS-VASRDVKVLVVG 133 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~-~~~p~a~viv~t 133 (329)
+||++. |. ..+.++.+.+.. ..+|+++|..++
T Consensus 63 lVilav--P~--------------~~~~~vl~~l~~~~l~~~~ivtDv~ 95 (359)
T PRK06545 63 LIVLAV--PV--------------DATAALLAELADLELKPGVIVTDVG 95 (359)
T ss_pred EEEEeC--CH--------------HHHHHHHHHHhhcCCCCCcEEEeCc
Confidence 999983 21 234455556654 234676665444
No 174
>PRK09135 pteridine reductase; Provisional
Probab=97.47 E-value=0.00069 Score=60.12 Aligned_cols=112 Identities=14% Similarity=0.043 Sum_probs=64.1
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeec
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHE 75 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~ 75 (329)
||. +.++|.|+||+|++|++++..|++.|. +|.+++++. .+.++....++.+...... .+++-..
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~-------~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 70 (249)
T PRK09135 1 MMTDSAKVALITGGARRIGAAIARTLHAAGY-------RVAIHYHRS---AAEADALAAELNALRPGSAAALQADLLDPD 70 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC---HHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 443 457899999999999999999999887 899999862 2223333333332110000 0111111
Q ss_pred Ccccc-------cCCccEEEEeCCCCCC--CC----CCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 76 NPITA-------FKDANIAILIGSFPRK--SN----MERSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 76 ~~~~a-------l~~aDiVi~~~g~~~~--~g----~~~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
+..++ +...|+||+++|.... .. .+....+..|+.....+.+.+.++
T Consensus 71 ~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 71 ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 11122 2357999999875321 11 123445667777666666665543
No 175
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00062 Score=60.89 Aligned_cols=35 Identities=17% Similarity=0.175 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+++.|+||+|.+|..++..|++.|. +|++++++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-------~v~~~~r~ 40 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-------KVVVADRD 40 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence 357999999999999999999999886 89999998
No 176
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0014 Score=58.27 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+++.|+||+|++|.+++..|++.|. +|+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~vi~~~r~ 39 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-------SVVVADIN 39 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 457899999999999999999999886 89999998
No 177
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.46 E-value=0.00056 Score=63.29 Aligned_cols=62 Identities=21% Similarity=0.320 Sum_probs=47.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccE
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANI 86 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDi 86 (329)
||+|||. |.+|.+++..|+..|. +|++||++ .++++. +.... ...+.+..++++++|+
T Consensus 3 ~Ig~IGl-G~mG~~mA~~l~~~G~-------~V~v~d~~----~~~~~~----~~~~g------~~~~~s~~~~~~~aDv 60 (296)
T PRK15461 3 AIAFIGL-GQMGSPMASNLLKQGH-------QLQVFDVN----PQAVDA----LVDKG------ATPAASPAQAAAGAEF 60 (296)
T ss_pred eEEEEee-CHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHHH----HHHcC------CcccCCHHHHHhcCCE
Confidence 7999998 9999999999999887 89999998 444432 22211 2233455678899999
Q ss_pred EEEe
Q psy9582 87 AILI 90 (329)
Q Consensus 87 Vi~~ 90 (329)
||++
T Consensus 61 Vi~~ 64 (296)
T PRK15461 61 VITM 64 (296)
T ss_pred EEEe
Confidence 9997
No 178
>KOG2666|consensus
Probab=97.45 E-value=0.00021 Score=64.97 Aligned_cols=80 Identities=21% Similarity=0.179 Sum_probs=54.7
Q ss_pred CEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--------C-ccceEeec
Q psy9582 6 VRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--------L-LVDVSVHE 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--------~-~~~i~~~~ 75 (329)
+||+.||| |.+|......++ ++.- ++|+++|++ ..+..++-.|---...| + ..++.+++
T Consensus 2 ~kicciga-gyvggptcavia~kcp~------i~vtvvd~s----~~ri~~wnsd~lpiyepgldevv~~crgknlffst 70 (481)
T KOG2666|consen 2 VKICCIGA-GYVGGPTCAVIALKCPD------IEVTVVDIS----VPRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFST 70 (481)
T ss_pred ceEEEecC-cccCCcchheeeecCCc------eEEEEEecC----chHhhcccCCCCcccCCCHHHHHHHhcCCceeeec
Confidence 58999999 999987544443 3433 399999999 44454432221111001 1 15788889
Q ss_pred CcccccCCccEEEEeCCCCCC
Q psy9582 76 NPITAFKDANIAILIGSFPRK 96 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~ 96 (329)
|.+.+++.||+|++....|.|
T Consensus 71 diekai~eadlvfisvntptk 91 (481)
T KOG2666|consen 71 DIEKAIKEADLVFISVNTPTK 91 (481)
T ss_pred chHHHhhhcceEEEEecCCcc
Confidence 999999999999998887765
No 179
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0006 Score=60.45 Aligned_cols=38 Identities=26% Similarity=0.335 Sum_probs=33.5
Q ss_pred CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||.+ .+++.|+||+|.+|.+++..|+..|. +|++++++
T Consensus 1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~-------~Vi~~~r~ 40 (239)
T PRK07666 1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGV-------NVGLLART 40 (239)
T ss_pred CCccCCCCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 6643 46899999999999999999999887 89999998
No 180
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00064 Score=61.96 Aligned_cols=116 Identities=9% Similarity=0.037 Sum_probs=65.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA 80 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a 80 (329)
|.+.++|.|+||+|++|.+++..|++.|. +|++.+++ .+.+... ....... ..+++-..+..++
T Consensus 1 m~~~k~vlItGasggiG~~la~~l~~~G~-------~Vi~~~r~----~~~~~~l----~~~~~~~~~~Dl~d~~~~~~~ 65 (277)
T PRK05993 1 MDMKRSILITGCSSGIGAYCARALQSDGW-------RVFATCRK----EEDVAAL----EAEGLEAFQLDYAEPESIAAL 65 (277)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHH----HHCCceEEEccCCCHHHHHHH
Confidence 33346899999999999999999999887 89999998 3333321 1110000 0011100111111
Q ss_pred c--------CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 81 F--------KDANIAILIGSFPRKS---NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 81 l--------~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+ ...|++|..+|..... ..+ ....+..|+.. .+.+.+.+.+. ..+.||++|-
T Consensus 66 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~--~~g~iv~isS 135 (277)
T PRK05993 66 VAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ--GQGRIVQCSS 135 (277)
T ss_pred HHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc--CCCEEEEECC
Confidence 1 2469999988764321 112 23445666655 56666666664 2345666653
No 181
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00056 Score=60.26 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|..++..|++.|. +|++++++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~-------~v~~~~r~ 40 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA-------RVALIGRG 40 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC-------eEEEEeCC
Confidence 57999999999999999999999987 89999998
No 182
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.42 E-value=0.00064 Score=62.52 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=53.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..||+|+|| |.+|++++..|...|.- +|+++|++ .++++..+.++.+.. +. ..+....+..+.++++
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~~------~I~I~nR~----~~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~a 193 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGVE------RLTIFDVD----PARAAALADELNARF-PA-ARATAGSDLAAALAAA 193 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCC------EEEEECCC----HHHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCC
Confidence 368999999 99999999999988863 79999999 677777766665432 11 1222223345678899
Q ss_pred cEEEEe
Q psy9582 85 NIAILI 90 (329)
Q Consensus 85 DiVi~~ 90 (329)
|+||.+
T Consensus 194 DiVIna 199 (284)
T PRK12549 194 DGLVHA 199 (284)
T ss_pred CEEEEC
Confidence 999997
No 183
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.42 E-value=0.00068 Score=62.83 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=57.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--- 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--- 82 (329)
+||+|||. |.+|++++..|+..+. +|.+||++ +++.+. +.+.. .....+..+.++
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~-------~v~v~dr~----~~~~~~----~~~~g------~~~~~~~~e~~~~~~ 58 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH-------EVVGYDRN----PEAVEA----LAEEG------ATGADSLEELVAKLP 58 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC-------eEEEEECC----HHHHHH----HHHCC------CeecCCHHHHHhhcC
Confidence 47999998 9999999999999887 89999998 444432 22211 222333344444
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
++|+||++.... +.++++.+.+....+++.++|..|+
T Consensus 59 ~~dvvi~~v~~~---------------~~~~~v~~~l~~~l~~g~ivid~st 95 (301)
T PRK09599 59 APRVVWLMVPAG---------------EITDATIDELAPLLSPGDIVIDGGN 95 (301)
T ss_pred CCCEEEEEecCC---------------cHHHHHHHHHHhhCCCCCEEEeCCC
Confidence 469998873211 1333333444444446677777754
No 184
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.42 E-value=0.001 Score=64.23 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCcccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPITA 80 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~a 80 (329)
+++++.|+||+|++|.+++..|++.|. +|.+++++ .+++... ..+..... .....++ .+..+.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-------~Vi~l~r~----~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~ 242 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-------KVVALTSN----SDKITLE---INGEDLPVKTLHWQVGQEAALAEL 242 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH
Confidence 346899999999999999999999887 89999987 3333211 11100000 0011111 122345
Q ss_pred cCCccEEEEeCCCCCCCCCC---HHHHHHHHHHHHHHHHHH
Q psy9582 81 FKDANIAILIGSFPRKSNME---RSELLAINSSIFIEQGKA 118 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~---~~~~~~~n~~~~~~i~~~ 118 (329)
+.+.|++|+.+|.......+ ....+..|......+++.
T Consensus 243 l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a 283 (406)
T PRK07424 243 LEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMEL 283 (406)
T ss_pred hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999988764322222 234456666644444433
No 185
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.41 E-value=0.00078 Score=59.70 Aligned_cols=125 Identities=14% Similarity=0.217 Sum_probs=67.8
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc--
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP-- 77 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~-- 77 (329)
||. +.+++.|+||+|.+|..++..|++.|. .|.+.+++ .++++....++.........++.-..+.
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~-------~v~~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (245)
T PRK12936 1 MFDLSGRKALVTGASGGIGEEIARLLHAQGA-------IVGLHGTR----VEKLEALAAELGERVKIFPANLSDRDEVKA 69 (245)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence 553 357999999999999999999999886 78888887 4444332222211000000011000111
Q ss_pred -----ccccCCccEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCch
Q psy9582 78 -----ITAFKDANIAILIGSFPRKS---N---MERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNPV 136 (329)
Q Consensus 78 -----~~al~~aDiVi~~~g~~~~~---g---~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP~ 136 (329)
.+.+...|+||+++|..... . .+....+..|+.....+++.+.+.. .+.+.+++++...
T Consensus 70 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 141 (245)
T PRK12936 70 LGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVV 141 (245)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHH
Confidence 11245689999998864311 1 1233445566665554544433221 1345666666543
No 186
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.41 E-value=0.00061 Score=65.14 Aligned_cols=79 Identities=18% Similarity=0.198 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..+||+||||.|.+|.+++..|...|+ +|+++|++ .. .+..+++++
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~-------~V~~~d~~----~~-----------------------~~~~~~~~~ 142 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGY-------QVRILEQD----DW-----------------------DRAEDILAD 142 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCC-------eEEEeCCC----cc-----------------------hhHHHHHhc
Confidence 347999999559999999999999887 89999986 10 012356789
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
||+||++. |. ..+.++.+.+.. .+|+++|+-+|
T Consensus 143 aDlVilav--P~--------------~~~~~~~~~l~~-l~~~~iv~Dv~ 175 (374)
T PRK11199 143 AGMVIVSV--PI--------------HLTEEVIARLPP-LPEDCILVDLT 175 (374)
T ss_pred CCEEEEeC--cH--------------HHHHHHHHHHhC-CCCCcEEEECC
Confidence 99999983 21 122333444555 35777765554
No 187
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.39 E-value=0.00078 Score=63.47 Aligned_cols=174 Identities=10% Similarity=0.093 Sum_probs=92.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC-
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK- 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~- 82 (329)
|||.|+||+|++|++++..|+..|.. .+..+|.... ..... ....+.... ..+ ..++.-..+..++++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~------~v~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 71 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD------SVVNVDKLTY--AGNLE-SLADVSDSERYVFEHADICDRAELDRIFAQ 71 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC------eEEEecCCCc--cchHH-HHHhcccCCceEEEEecCCCHHHHHHHHHh
Confidence 48999999999999999999988751 4666775410 01111 011111000 000 011111122234454
Q ss_pred -CccEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhcC------CC-eEEEEEcCchhhHHH-----------
Q psy9582 83 -DANIAILIGSFPRK--SNMERSELLAINSSIFIEQGKALNSVAS------RD-VKVLVVGNPVNTNTY----------- 141 (329)
Q Consensus 83 -~aDiVi~~~g~~~~--~g~~~~~~~~~n~~~~~~i~~~i~~~~~------p~-a~viv~tNP~~~~~~----------- 141 (329)
+.|+||++|+.... +.......+..|+.....+++.+.++.. .. ..+|.+|-.. +...
T Consensus 72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~ 150 (352)
T PRK10084 72 HQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSE 150 (352)
T ss_pred cCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccc
Confidence 47999999876431 1223456788999999999998887510 11 2444444221 0000
Q ss_pred ---HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582 142 ---ITMKSAPDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190 (329)
Q Consensus 142 ---~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h 190 (329)
.+.+.. .+.|....+.+-....++...+++..+++...++...|.|.+
T Consensus 151 ~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~ 201 (352)
T PRK10084 151 ELPLFTETT-AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY 201 (352)
T ss_pred cCCCccccC-CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCC
Confidence 011111 122333445555555556566677778776666655567764
No 188
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=97.39 E-value=0.0009 Score=60.56 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=64.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||++||+ |+||.+++..|...+..... +|.+.|++ .+++. ++.+.. +. . .+++..++...+|
T Consensus 2 ~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~---~I~v~~~~----~e~~~----~l~~~~-g~--~--~~~~~~~~~~~ad 64 (266)
T COG0345 2 MKIGFIGA-GNMGEAILSGLLKSGALPPE---EIIVTNRS----EEKRA----ALAAEY-GV--V--TTTDNQEAVEEAD 64 (266)
T ss_pred ceEEEEcc-CHHHHHHHHHHHhcCCCCcc---eEEEeCCC----HHHHH----HHHHHc-CC--c--ccCcHHHHHhhCC
Confidence 57999999 99999999999998843322 89999988 44333 232211 11 1 2566678899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+||++. || ..+.++++.++.. .++.+||-+.
T Consensus 65 vv~Lav----KP------------q~~~~vl~~l~~~-~~~~lvISia 95 (266)
T COG0345 65 VVFLAV----KP------------QDLEEVLSKLKPL-TKDKLVISIA 95 (266)
T ss_pred EEEEEe----Ch------------HhHHHHHHHhhcc-cCCCEEEEEe
Confidence 999973 33 3666777777763 3566665554
No 189
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=97.39 E-value=0.0014 Score=61.64 Aligned_cols=114 Identities=14% Similarity=0.147 Sum_probs=73.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc----------CCccceEee
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF----------PLLVDVSVH 74 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~----------~~~~~i~~~ 74 (329)
..+|+|||- |+||..+|..++..|. .|.=+|+| +.+.+..-.--.+... -...+++.|
T Consensus 9 ~~~I~ViGL-GYVGLPlA~~fA~~G~-------~ViG~DIn----~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraT 76 (436)
T COG0677 9 SATIGVIGL-GYVGLPLAAAFASAGF-------KVIGVDIN----QKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRAT 76 (436)
T ss_pred ceEEEEEcc-ccccHHHHHHHHHcCC-------ceEeEeCC----HHHHHHHhCCcceeecCcHHHHHHHHHhcCCceEe
Confidence 379999998 9999999999999998 89999999 4444321100000000 012568888
Q ss_pred cCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchh
Q psy9582 75 ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVN 137 (329)
Q Consensus 75 ~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~ 137 (329)
++ .+.++.||++|++.-+|-+...+ -++..+.+-++.|.++.++...||+= |-|..
T Consensus 77 td-~~~l~~~dv~iI~VPTPl~~~~~------pDls~v~~aa~sIa~~L~kG~LVIlEST~~PG 133 (436)
T COG0677 77 TD-PEELKECDVFIICVPTPLKKYRE------PDLSYVESAARSIAPVLKKGDLVILESTTPPG 133 (436)
T ss_pred cC-hhhcccCCEEEEEecCCcCCCCC------CChHHHHHHHHHHHHhcCCCCEEEEecCCCCC
Confidence 87 57788999999997776543211 12235555566666666554455444 45543
No 190
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00067 Score=63.75 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=68.8
Q ss_pred CCC--CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--c
Q psy9582 1 MLK--KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--E 75 (329)
Q Consensus 1 ~~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~ 75 (329)
||+ +.+++.|+||+|.+|.+++..|+..|. +|++++++ +++++....++....... .....++ .
T Consensus 1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~-------~Vvl~~R~----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~ 69 (330)
T PRK06139 1 MMGPLHGAVVVITGASSGIGQATAEAFARRGA-------RLVLAARD----EEALQAVAEECRALGAEVLVVPTDVTDAD 69 (330)
T ss_pred CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHH
Confidence 554 347899999999999999999999987 89999998 555554444443321110 0011111 1
Q ss_pred Cccc-------ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEc
Q psy9582 76 NPIT-------AFKDANIAILIGSFPRKS---NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 76 ~~~~-------al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~t 133 (329)
+..+ .+...|++|..+|..... ..+ ....+..|.-.. +...+.+.+. ..+.+|+++
T Consensus 70 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~--~~g~iV~is 142 (330)
T PRK06139 70 QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ--GHGIFINMI 142 (330)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc--CCCEEEEEc
Confidence 1111 125679999998864321 112 223455555433 3344555543 245666654
No 191
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0011 Score=59.83 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=67.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCcccc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPITA- 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~a- 80 (329)
.+++.|+||+|.+|..++..|+..|. +|+++|++ .+.+.....++....... ...+.++ .+..+.
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~ 77 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA-------NVAVASRS----QEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF 77 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence 47999999999999999999999887 89999988 333333323332211000 0011111 111111
Q ss_pred ------cCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcCch
Q psy9582 81 ------FKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKALNSVA-SRDVKVLVVGNPV 136 (329)
Q Consensus 81 ------l~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tNP~ 136 (329)
+...|++|..+|..... ..+. ...+..|+.....+.+.+.+.. ++++.|++++.+.
T Consensus 78 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~ 146 (264)
T PRK07576 78 AQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146 (264)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence 34569999988643211 1222 2334566665555555444321 1345677776643
No 192
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00089 Score=61.71 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI 57 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~ 57 (329)
+.++|.|+||+|++|.+++..|++.|. +|++++++ .+.++...
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-------~Vi~~~R~----~~~l~~~~ 81 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-------TVVAVARR----EDLLDAVA 81 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHH
Confidence 347899999999999999999999887 89999998 44444433
No 193
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=97.38 E-value=0.00045 Score=56.96 Aligned_cols=106 Identities=15% Similarity=0.138 Sum_probs=66.5
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH---hhhhhcccCCccceEeecCc-ccccCC
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI---MEIEDCIFPLLVDVSVHENP-ITAFKD 83 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~---~dl~~~~~~~~~~i~~~~~~-~~al~~ 83 (329)
|+|+|+ |.+|..+|..|.+.+. +|.++++. . +++... ..+................. .+..+.
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~-------~V~l~~r~----~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH-------DVTLVSRS----P-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGP 67 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC-------EEEEEESH----H-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHST
T ss_pred CEEECc-CHHHHHHHHHHHHCCC-------ceEEEEcc----c-cHHhhhheeEEEEecccceecccccccCcchhccCC
Confidence 789999 9999999999999887 99999998 3 333211 11111000000011111121 246789
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYI 142 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~ 142 (329)
+|+||++.-. ....+..+.++++..++..|+.+-|=.+..-.+
T Consensus 68 ~D~viv~vKa----------------~~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l 110 (151)
T PF02558_consen 68 YDLVIVAVKA----------------YQLEQALQSLKPYLDPNTTIVSLQNGMGNEEVL 110 (151)
T ss_dssp ESEEEE-SSG----------------GGHHHHHHHHCTGEETTEEEEEESSSSSHHHHH
T ss_pred CcEEEEEecc----------------cchHHHHHHHhhccCCCcEEEEEeCCCCcHHHH
Confidence 9999998311 234556677888887888889998977665333
No 194
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.00079 Score=60.87 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=32.8
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
|| +..+|.|+||+|.+|++++..|++.|. +|++.+++
T Consensus 1 m~-~~~~vlVtGasg~iG~~~a~~l~~~g~-------~V~~~~r~ 37 (270)
T PRK06179 1 MS-NSKVALVTGASSGIGRATAEKLARAGY-------RVFGTSRN 37 (270)
T ss_pred CC-CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 44 446899999999999999999999887 89999998
No 195
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.00097 Score=59.93 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=65.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCcccc---
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITA--- 80 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~a--- 80 (329)
+++.|+||+|.+|..++..|++.|. +|.++|++ .+.++....++......+ ..+.++ .+..++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~ 69 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-------RVGAYDIN----EAGLAALAAELGAGNAWT-GALDVTDRAAWDAALAD 69 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHhcCCceEE-EEecCCCHHHHHHHHHH
Confidence 4699999999999999999999887 89999988 443332222221100000 011111 111122
Q ss_pred -----cCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582 81 -----FKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP 135 (329)
Q Consensus 81 -----l~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP 135 (329)
....|+||+++|...... .+ ....+..|+.....+.+.+.++. .+.+.+++++-.
T Consensus 70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~ 137 (260)
T PRK08267 70 FAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSA 137 (260)
T ss_pred HHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 235599999988653211 11 33455667775555544443221 134556665543
No 196
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.00054 Score=62.26 Aligned_cols=36 Identities=17% Similarity=0.026 Sum_probs=31.9
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||. ++|.|+||+|.+|++++..|++.|. +|.+.+++
T Consensus 1 ~~~--k~vlItGasg~iG~~~a~~l~~~g~-------~V~~~~r~ 36 (275)
T PRK08263 1 MME--KVWFITGASRGFGRAWTEAALERGD-------RVVATARD 36 (275)
T ss_pred CCC--CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECC
Confidence 444 4799999999999999999999886 89999988
No 197
>PLN02686 cinnamoyl-CoA reductase
Probab=97.36 E-value=0.00071 Score=64.49 Aligned_cols=106 Identities=12% Similarity=0.125 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--------ccCC-ccceEeec
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--------IFPL-LVDVSVHE 75 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--------~~~~-~~~i~~~~ 75 (329)
.++|.|+||+|++|++++..|++.|. +|+++..+ .+.+... .++... ...+ ..++.-..
T Consensus 53 ~k~VLVTGatGfIG~~lv~~L~~~G~-------~V~~~~r~----~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~ 120 (367)
T PLN02686 53 ARLVCVTGGVSFLGLAIVDRLLRHGY-------SVRIAVDT----QEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPE 120 (367)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHH-HHHhhhccccccCCceEEEEcCCCCHH
Confidence 46899999999999999999999987 88877665 2222211 111100 0000 01221112
Q ss_pred CcccccCCccEEEEeCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 76 NPITAFKDANIAILIGSFPRKSNM--ERSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g~--~~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
+..++++++|.||++++.....+. ........|+...+++.+.+.+.
T Consensus 121 ~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~ 169 (367)
T PLN02686 121 SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT 169 (367)
T ss_pred HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence 345568899999998765322221 12334566888889999988775
No 198
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.36 E-value=0.00093 Score=64.27 Aligned_cols=116 Identities=12% Similarity=0.107 Sum_probs=67.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhh--Hhhhhhc--ccCC-ccceEeecC
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGV--IMEIEDC--IFPL-LVDVSVHEN 76 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~--~~dl~~~--~~~~-~~~i~~~~~ 76 (329)
|.+.+||.|+||+|++|++++..|+..|. +|++++++ ....... ..++... .... ..++.-..+
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-------~V~~l~R~----~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 125 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGY-------NVVAVARE----KSGIRGKNGKEDTKKELPGAEVVFGDVTDADS 125 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEEec----hhhccccchhhHHhhhcCCceEEEeeCCCHHH
Confidence 34567999999999999999999999887 89999987 2222110 0011000 0000 011111122
Q ss_pred cccccC----CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 77 PITAFK----DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 77 ~~~al~----~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
..++++ ++|+||++++.+.... .+....|......+.+.+++.. -. .+|.+|
T Consensus 126 l~~~~~~~~~~~D~Vi~~aa~~~~~~---~~~~~vn~~~~~~ll~aa~~~g-v~-r~V~iS 181 (390)
T PLN02657 126 LRKVLFSEGDPVDVVVSCLASRTGGV---KDSWKIDYQATKNSLDAGREVG-AK-HFVLLS 181 (390)
T ss_pred HHHHHHHhCCCCcEEEECCccCCCCC---ccchhhHHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence 344455 5899999766432111 1224567777788888887763 33 344444
No 199
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.36 E-value=0.0015 Score=61.55 Aligned_cols=175 Identities=10% Similarity=0.075 Sum_probs=92.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccceEeecCcccccC-
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVDVSVHENPITAFK- 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~i~~~~~~~~al~- 82 (329)
+||.|+||+|++|++++..|+..|.- .++++|..+. ....... ..+... ...+ ..++.-..+..++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~------~v~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 72 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSD------AVVVVDKLTY--AGNLMSL-APVAQSERFAFEKVDICDRAELARVFTE 72 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCC------EEEEEecCcc--ccchhhh-hhcccCCceEEEECCCcChHHHHHHHhh
Confidence 47999999999999999999988751 4667776510 0111100 011000 0000 011111122334455
Q ss_pred -CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhc------CCC-eEEEEEcCchhhH-----HHHHHHHC
Q psy9582 83 -DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVA------SRD-VKVLVVGNPVNTN-----TYITMKSA 147 (329)
Q Consensus 83 -~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~------~p~-a~viv~tNP~~~~-----~~~~~~~~ 147 (329)
+.|+||++++..... ..........|+.....+++.+.+++ ++. ..++.+|-..-.- ...+.+..
T Consensus 73 ~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~ 152 (355)
T PRK10217 73 HQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETT 152 (355)
T ss_pred cCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCC
Confidence 389999998864321 12345567789999999998887641 011 2455554321000 00011111
Q ss_pred CCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582 148 PDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190 (329)
Q Consensus 148 ~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h 190 (329)
...+....+.+-....++....++..+++..-++...|+|.+
T Consensus 153 -~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~ 194 (355)
T PRK10217 153 -PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPY 194 (355)
T ss_pred -CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCC
Confidence 112222334455545556666677778776666666567754
No 200
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.00098 Score=59.28 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=62.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec---------
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--------- 75 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--------- 75 (329)
.+++.|+||+|.+|++++..|++.|. +|++++++ .+.+.....++.... .. .....+.
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~ 72 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGA-------RVAITGRD----PASLEAARAELGESA-LV-IRADAGDVAAQKALAQ 72 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCC----HHHHHHHHHHhCCce-EE-EEecCCCHHHHHHHHH
Confidence 36999999999999999999999987 89999988 333332221111000 00 0000000
Q ss_pred CcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh
Q psy9582 76 NPITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
...+.+...|+||+.+|..... ..+ ....+..|+.....+.+.+.++
T Consensus 73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (249)
T PRK06500 73 ALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL 125 (249)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 0112235679999998864321 112 2345667777777777776653
No 201
>PLN02256 arogenate dehydrogenase
Probab=97.35 E-value=0.0037 Score=58.04 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc-C
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF-K 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al-~ 82 (329)
+.+||+|||+ |.+|+.++..|.+.|. +|+.+|.+ .. ...+.++ . +...++..+.+ .
T Consensus 35 ~~~kI~IIG~-G~mG~slA~~L~~~G~-------~V~~~d~~----~~--~~~a~~~-----g----v~~~~~~~e~~~~ 91 (304)
T PLN02256 35 RKLKIGIVGF-GNFGQFLAKTFVKQGH-------TVLATSRS----DY--SDIAAEL-----G----VSFFRDPDDFCEE 91 (304)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCC-------EEEEEECc----cH--HHHHHHc-----C----CeeeCCHHHHhhC
Confidence 4579999998 9999999999998775 89999988 21 1111111 1 12234444454 4
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hhhcCCCeEEEEEcC
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKAL-NSVASRDVKVLVVGN 134 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i-~~~~~p~a~viv~tN 134 (329)
++|+||++... ..+.++.+.+ ..+.+++++|+-++.
T Consensus 92 ~aDvVilavp~----------------~~~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 92 HPDVVLLCTSI----------------LSTEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred CCCEEEEecCH----------------HHHHHHHHhhhhhccCCCCEEEecCC
Confidence 79999997321 2344444544 333347777766665
No 202
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.33 E-value=0.00077 Score=62.86 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=33.1
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||. +.+++.|+||+|++|.+++..|+..|. +|++.+++
T Consensus 1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~ 39 (322)
T PRK07453 1 MSQDAKGTVIITGASSGVGLYAAKALAKRGW-------HVIMACRN 39 (322)
T ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEECC
Confidence 443 456899999999999999999999886 89999988
No 203
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.33 E-value=0.0012 Score=61.67 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=45.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.+||+|||. |++|.++|..|...|+ +|+.++.+ ..+....+. .. . +.. .+..+++++|
T Consensus 17 gktIgIIG~-GsmG~AlA~~L~~sG~-------~Vvv~~r~----~~~s~~~A~---~~--G----~~~-~s~~eaa~~A 74 (330)
T PRK05479 17 GKKVAIIGY-GSQGHAHALNLRDSGV-------DVVVGLRE----GSKSWKKAE---AD--G----FEV-LTVAEAAKWA 74 (330)
T ss_pred CCEEEEEee-HHHHHHHHHHHHHCCC-------EEEEEECC----chhhHHHHH---HC--C----Cee-CCHHHHHhcC
Confidence 479999998 9999999999999887 78888776 222211111 11 1 122 2567889999
Q ss_pred cEEEEe
Q psy9582 85 NIAILI 90 (329)
Q Consensus 85 DiVi~~ 90 (329)
|+|+++
T Consensus 75 DVVvLa 80 (330)
T PRK05479 75 DVIMIL 80 (330)
T ss_pred CEEEEc
Confidence 999997
No 204
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.33 E-value=0.00064 Score=61.29 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+++.|+||+|.+|.+++..|+..|. +|.++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~ 39 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-------RVAVLERS 39 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 457999999999999999999999987 89999998
No 205
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.33 E-value=0.00084 Score=60.13 Aligned_cols=118 Identities=11% Similarity=0.103 Sum_probs=67.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCcccc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENPITA- 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~~~a- 80 (329)
.++|.|+||+|.+|+.++..|+..|. +|++++++ .+.+.....++........ .++.-..+..++
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 79 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGA-------HVLVNGRN----AATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 57899999999999999999999887 89999998 4444433334432110000 011111111112
Q ss_pred ------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcCc
Q psy9582 81 ------FKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 81 ------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tNP 135 (329)
+...|.+|..+|.... + ..+ ....+..|+.....++ +.+.+. ..+.+++++..
T Consensus 80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~~ss~ 148 (256)
T PRK06124 80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ--GYGRIIAITSI 148 (256)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEeec
Confidence 2345899998876421 1 112 2234566666555555 444333 34566676654
No 206
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.33 E-value=0.0028 Score=56.87 Aligned_cols=119 Identities=11% Similarity=0.128 Sum_probs=68.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc----
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP---- 77 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~---- 77 (329)
.+++.|+||+|.+|++++..|+..|. +|++++++ .++++....++....... ..+++-..+.
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~ 80 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGA-------RVVLSARK----AEELEEAAAHLEALGIDALWIAADVADEADIERLA 80 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 47899999999999999999999887 89999998 333433322332111000 0011100111
Q ss_pred ---ccccCCccEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhh---cCCCeEEEEEcC
Q psy9582 78 ---ITAFKDANIAILIGSFPRKS---N---MERSELLAINSSIFIEQGKALNSV---ASRDVKVLVVGN 134 (329)
Q Consensus 78 ---~~al~~aDiVi~~~g~~~~~---g---~~~~~~~~~n~~~~~~i~~~i~~~---~~p~a~viv~tN 134 (329)
.+.+...|.||+++|..... . ......+..|+.....+.+.+.++ .++.+.++++|.
T Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS 149 (259)
T PRK08213 81 EETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS 149 (259)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 11124679999998753211 1 122344567777777776655443 113456666654
No 207
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=97.32 E-value=0.0033 Score=58.03 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=67.5
Q ss_pred CEEEEEcCCCc--------------------hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhcc
Q psy9582 6 VRISITGAAGQ--------------------IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDCI 64 (329)
Q Consensus 6 ~kI~IiGa~G~--------------------vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~~ 64 (329)
|||+|-|| |+ -|+++|..|+..|+ +|++||++ .+++. .....+.+.
T Consensus 1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh-------eV~V~Drn----rsa~e~e~~e~Laea- 67 (341)
T TIGR01724 1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH-------DVVLAEPN----REFMSDDLWKKVEDA- 67 (341)
T ss_pred CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC-------EEEEEeCC----hhhhhhhhhHHHHHC-
Confidence 57888888 75 37899999999998 99999998 33332 112233332
Q ss_pred cCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHH
Q psy9582 65 FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYIT 143 (329)
Q Consensus 65 ~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~ 143 (329)
......+..++.+++|+||++-.. .+.+++++..+.....+++++|..| -+.+.+-+++
T Consensus 68 -----GA~~AaS~aEAAa~ADVVIL~LPd---------------~aaV~eVl~GLaa~L~~GaIVID~STIsP~t~~~~~ 127 (341)
T TIGR01724 68 -----GVKVVSDDKEAAKHGEIHVLFTPF---------------GKGTFSIARTIIEHVPENAVICNTCTVSPVVLYYSL 127 (341)
T ss_pred -----CCeecCCHHHHHhCCCEEEEecCC---------------HHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHH
Confidence 133445667899999999997321 2344444444554444666776664 4555555555
Q ss_pred HH
Q psy9582 144 MK 145 (329)
Q Consensus 144 ~~ 145 (329)
..
T Consensus 128 e~ 129 (341)
T TIGR01724 128 EK 129 (341)
T ss_pred HH
Confidence 44
No 208
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.001 Score=59.81 Aligned_cols=121 Identities=14% Similarity=0.071 Sum_probs=68.2
Q ss_pred CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc--ccCC---ccceEe
Q psy9582 1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC--IFPL---LVDVSV 73 (329)
Q Consensus 1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~--~~~~---~~~i~~ 73 (329)
||.+ .+++.|+||+|.+|.+++..|++.|. +|+++|++ .+.++....++... .... ..++.-
T Consensus 1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~-------~vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 69 (260)
T PRK07063 1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGA-------AVALADLD----AALAERAAAAIARDVAGARVLAVPADVTD 69 (260)
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhccCCceEEEEEccCCC
Confidence 5542 46899999999999999999999987 89999998 44444444444321 0000 001110
Q ss_pred ecCcccc-------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582 74 HENPITA-------FKDANIAILIGSFPRK-S--NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 74 ~~~~~~a-------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+..++ +...|++|..+|.... + ..+ ....+..|+... +...+.+.+. ..+.||+++-
T Consensus 70 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS 145 (260)
T PRK07063 70 AASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER--GRGSIVNIAS 145 (260)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh--CCeEEEEECC
Confidence 0111111 3468999999886421 1 112 223345565544 4444444442 3456666654
No 209
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.32 E-value=0.0013 Score=58.24 Aligned_cols=124 Identities=21% Similarity=0.196 Sum_probs=67.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc---cceEeecCc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL---VDVSVHENP 77 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~---~~i~~~~~~ 77 (329)
||.+.+++.|+||+|++|++++..|++.|. +|++...+. .........++........ .++.-..+.
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 70 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGA-------NVVINYASS---EAGAEALVAEIGALGGKALAVQGDVSDAESV 70 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCc---hhHHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 566668999999999999999999999887 787777652 2122222222221110000 011000011
Q ss_pred -------ccccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhcC--CCeEEEEEcC
Q psy9582 78 -------ITAFKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKALNSVAS--RDVKVLVVGN 134 (329)
Q Consensus 78 -------~~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i~~~~~--p~a~viv~tN 134 (329)
.+.+.+.|.||+++|..... ..+. ...+..|+.....+.+.+.++.. +...+++++.
T Consensus 71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 71 ERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 11234689999988764321 1122 23345666666666666655421 2345555553
No 210
>PRK05865 hypothetical protein; Provisional
Probab=97.31 E-value=0.0016 Score=68.18 Aligned_cols=105 Identities=14% Similarity=0.139 Sum_probs=69.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||.|+||+|++|++++..|+..|. +|+++|++. ...... ... ....++.-..+..++++++|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~-------~Vv~l~R~~---~~~~~~---~v~----~v~gDL~D~~~l~~al~~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH-------EVVGIARHR---PDSWPS---SAD----FIAADIRDATAVESAMTGAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCc---hhhccc---Cce----EEEeeCCCHHHHHHHHhCCC
Confidence 4799999999999999999999887 899999872 111100 000 00011111123456678999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
+||++++.... ....|+.....+++.+.+.. . ..+|++|.+.
T Consensus 64 ~VVHlAa~~~~-------~~~vNv~GT~nLLeAa~~~g-v-kr~V~iSS~~ 105 (854)
T PRK05865 64 VVAHCAWVRGR-------NDHINIDGTANVLKAMAETG-T-GRIVFTSSGH 105 (854)
T ss_pred EEEECCCcccc-------hHHHHHHHHHHHHHHHHHcC-C-CeEEEECCcH
Confidence 99999865321 34678888888888888763 3 3566777664
No 211
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.31 E-value=0.00098 Score=59.72 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=68.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCc----
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENP---- 77 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~---- 77 (329)
.++|.|+||+|++|..++..|++.|. +|++.|++ ++.++.....+.+...... ....++ .+.
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~ 78 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA-------EVILNGRD----PAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAI 78 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHH
Confidence 47999999999999999999999887 89999998 4434333333322110000 000111 011
Q ss_pred ---ccccCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582 78 ---ITAFKDANIAILIGSFPRK-S--NM---ERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP 135 (329)
Q Consensus 78 ---~~al~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP 135 (329)
.+.+...|+||+.+|.... + .. .....+..|+.....+.+.+.++. +..+.|+++|..
T Consensus 79 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 147 (255)
T PRK07523 79 DAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV 147 (255)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence 1223457999998886431 1 11 123445677665555555554432 134566776653
No 212
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.31 E-value=0.002 Score=57.70 Aligned_cols=120 Identities=13% Similarity=0.179 Sum_probs=66.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC----
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN---- 76 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~---- 76 (329)
..+++.|+||+|.+|.+++..|++.|. +|++.|++ .+++.....++.+..... ..++.-..+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-------~vvl~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 76 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-------EIIINDIT----AERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAA 76 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCC----HHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHH
Confidence 346899999999999999999999887 89999998 444443333333211000 001100001
Q ss_pred ---cccccCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582 77 ---PITAFKDANIAILIGSFPRK-S--NM---ERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN 134 (329)
Q Consensus 77 ---~~~al~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN 134 (329)
..+.+...|+||+++|.... + .. +....+..|......+.+.+.++. +..+.|+++|.
T Consensus 77 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK08085 77 IEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS 145 (254)
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 11123457999999886321 1 11 233445666555444444444332 13356666653
No 213
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.31 E-value=0.0012 Score=62.06 Aligned_cols=72 Identities=19% Similarity=0.369 Sum_probs=52.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
.++|.|+||+|++|+.++..|... +. . +|++++++ +++++....++... ++ .+..+++.+
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv-~-----~lilv~R~----~~rl~~La~el~~~------~i---~~l~~~l~~ 215 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGV-A-----ELLLVARQ----QERLQELQAELGGG------KI---LSLEEALPE 215 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCC-C-----EEEEEcCC----HHHHHHHHHHhccc------cH---HhHHHHHcc
Confidence 478999999999999999999864 43 2 89999988 55565444333211 11 135678999
Q ss_pred ccEEEEeCCCCC
Q psy9582 84 ANIAILIGSFPR 95 (329)
Q Consensus 84 aDiVi~~~g~~~ 95 (329)
+|+||.+++.+.
T Consensus 216 aDiVv~~ts~~~ 227 (340)
T PRK14982 216 ADIVVWVASMPK 227 (340)
T ss_pred CCEEEECCcCCc
Confidence 999999888765
No 214
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.29 E-value=0.0011 Score=60.40 Aligned_cols=95 Identities=18% Similarity=0.306 Sum_probs=65.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc--
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA-- 84 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a-- 84 (329)
||.|+||+|++|++++..|++.|. +|+++++. . .|+.+. .+..++++++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~-------~v~~~~r~----~-------~d~~~~-----------~~~~~~~~~~~~ 51 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR-------VVVALTSS----Q-------LDLTDP-----------EALERLLRAIRP 51 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-------EEEEeCCc----c-------cCCCCH-----------HHHHHHHHhCCC
Confidence 689999999999999999999886 89998775 1 122221 1123445544
Q ss_pred cEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 85 NIAILIGSFPRKSN--MERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 85 DiVi~~~g~~~~~g--~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
|+||++++...... .........|+.....+++.+.+.. . .+|++|
T Consensus 52 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--~~v~~S 99 (287)
T TIGR01214 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A--RLVHIS 99 (287)
T ss_pred CEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEe
Confidence 99999987643221 2344567788999999999888753 3 444444
No 215
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.29 E-value=0.00055 Score=61.69 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+++.|+||+|++|.+++..|++.|. +|.+.|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~ 38 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-------RVAVLDKS 38 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 457999999999999999999999987 89999988
No 216
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.002 Score=57.61 Aligned_cols=119 Identities=17% Similarity=0.157 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a 80 (329)
.++|.|+||+|.+|++++..|++.|. ++.+. +++ .+.++....++....... ..++.-..+..++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~-------~v~i~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~ 74 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA-------LVAIHYGRN----KQAADETIREIESNGGKAFLIEADLNSIDGVKKL 74 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC----HHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHH
Confidence 37999999999999999999999886 77665 444 333332222222110000 0011101111111
Q ss_pred c-------------CCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 81 F-------------KDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 81 l-------------~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+ .+.|+||+++|...... .+ ....+..|+.....+.+.+.++....+.++++|-
T Consensus 75 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS 147 (254)
T PRK12746 75 VEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISS 147 (254)
T ss_pred HHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 1 35899999988643211 12 2334556777766676666655323345555553
No 217
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.28 E-value=0.0015 Score=60.97 Aligned_cols=103 Identities=12% Similarity=0.216 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..++|+|+|+ |.+|..++..|...+.. +|.++|++ .+++...+..+.. .+....+..+++.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~------~V~v~~r~----~~ra~~la~~~g~-------~~~~~~~~~~~l~~ 238 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVA------EITIANRT----YERAEELAKELGG-------NAVPLDELLELLNE 238 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCC------EEEEEeCC----HHHHHHHHHHcCC-------eEEeHHHHHHHHhc
Confidence 3589999999 99999999999875542 79999998 4444433333211 11112345677899
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
+|+||.+.+.+.. ....... +.....+..+++-+++|-|+-
T Consensus 239 aDvVi~at~~~~~------------~~~~~~~---~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 239 ADVVISATGAPHY------------AKIVERA---MKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred CCEEEECCCCCch------------HHHHHHH---HhhCCCCCeEEEEeCCCCCCc
Confidence 9999998665541 0111221 222111456888999998753
No 218
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0031 Score=56.41 Aligned_cols=120 Identities=13% Similarity=0.164 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc---
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP--- 77 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~--- 77 (329)
..++|.|+||+|.+|.+++..|+..|. +|.++|++ .+.++....++....... ..++.-..+.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-------DVVLAART----AERLDEVAAEIDDLGRRALAVPTDITDEDQCANL 72 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHH
Confidence 347899999999999999999999987 89999998 333433333333211000 0111100111
Q ss_pred ----ccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEcC
Q psy9582 78 ----ITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVGN 134 (329)
Q Consensus 78 ----~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~tN 134 (329)
.+.+...|+||+.+|... ++ ..+ ....+..|+.....+.+.+.++.. ....||+++.
T Consensus 73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 122356899999987632 11 122 233455666655555555544311 1235666654
No 219
>PRK06196 oxidoreductase; Provisional
Probab=97.27 E-value=0.0017 Score=60.38 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC-------c
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN-------P 77 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~-------~ 77 (329)
.++|.|+||+|++|.+++..|+..|. +|++.+++ .++++....++.... .+..++.-..+ .
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~-------~Vv~~~R~----~~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~ 93 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA-------HVIVPARR----PDVAREALAGIDGVE-VVMLDLADLESVRAFAERF 93 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHH
Confidence 36899999999999999999999887 89999998 443432222222110 00001110001 1
Q ss_pred ccccCCccEEEEeCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 78 ITAFKDANIAILIGSFPRKSN----MERSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g----~~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.+.....|++|+.+|....+. ......+..|... ++.+.+.+.+. ..+.||++|-
T Consensus 94 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS 156 (315)
T PRK06196 94 LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG--AGARVVALSS 156 (315)
T ss_pred HhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCeEEEECC
Confidence 112357899999988643211 1233445555554 55555566553 2356666654
No 220
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.27 E-value=0.00098 Score=59.22 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|.+++..|+..|. +|++++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~-------~V~~~~r~ 39 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA-------EVIVVDIC 39 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 46899999999999999999999887 89999998
No 221
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0012 Score=58.12 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=30.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||+.|+||+|.+|++++..|++.|. +|++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~-------~v~~~~r~ 33 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH-------KVTLVGAR 33 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 3799999999999999999999887 89999998
No 222
>PRK08643 acetoin reductase; Validated
Probab=97.26 E-value=0.0026 Score=56.96 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=65.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeec-------
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHE------- 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~------- 75 (329)
+++.|+||+|.+|.+++..|++.|. +|+++|++ .+.++....++.+..... ..+++-..
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 71 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF-------KVAIVDYN----EETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVR 71 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 4799999999999999999999887 89999988 444433333333211000 00111101
Q ss_pred CcccccCCccEEEEeCCCCC-CCC--CC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcC
Q psy9582 76 NPITAFKDANIAILIGSFPR-KSN--ME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~-~~g--~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tN 134 (329)
...+.+.+.|+||+++|... .+. .+ ....+..|+... +.+.+.+.+.. +++.++++|-
T Consensus 72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS 139 (256)
T PRK08643 72 QVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG-HGGKIINATS 139 (256)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCEEEEECc
Confidence 11122346799999987642 211 11 223445565543 33444444432 3466666664
No 223
>PRK08507 prephenate dehydrogenase; Validated
Probab=97.26 E-value=0.0033 Score=57.46 Aligned_cols=66 Identities=17% Similarity=0.206 Sum_probs=43.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||. |.+|++++..|...+... +|+.+|++ .++++. ..+. .. +....+..+ +.++|
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~-----~v~~~d~~----~~~~~~----~~~~--g~---~~~~~~~~~-~~~aD 60 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLIS-----KVYGYDHN----ELHLKK----ALEL--GL---VDEIVSFEE-LKKCD 60 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCC-----EEEEEcCC----HHHHHH----HHHC--CC---CcccCCHHH-HhcCC
Confidence 47999998 999999999999887532 78999998 443331 1111 11 111123333 44699
Q ss_pred EEEEeC
Q psy9582 86 IAILIG 91 (329)
Q Consensus 86 iVi~~~ 91 (329)
+||++.
T Consensus 61 ~Vilav 66 (275)
T PRK08507 61 VIFLAI 66 (275)
T ss_pred EEEEeC
Confidence 999983
No 224
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0025 Score=57.44 Aligned_cols=118 Identities=13% Similarity=0.086 Sum_probs=66.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cccc--
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NPIT-- 79 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~~~-- 79 (329)
.+++.|+||+|++|.+++..|+..|. +|++++++ .+.++....++....... ...+.++. +..+
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 78 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGA-------DVLIAART----ESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLA 78 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 47899999999999999999999887 89999998 444443333333211000 00111111 1111
Q ss_pred -----ccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhcCCCeEEEEEcC
Q psy9582 80 -----AFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALN----SVASRDVKVLVVGN 134 (329)
Q Consensus 80 -----al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~----~~~~p~a~viv~tN 134 (329)
.+...|+||+.+|..... ..+ ....+..|+.....+.+.+. +.. ..+.+++++-
T Consensus 79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~sS 147 (263)
T PRK07814 79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS-GGGSVINISS 147 (263)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc-CCeEEEEEcc
Confidence 134679999998753211 112 23345556655555554443 332 3456666654
No 225
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0035 Score=56.41 Aligned_cols=122 Identities=20% Similarity=0.204 Sum_probs=67.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NP 77 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~ 77 (329)
|..+..++.|+||+|.+|..++..|+..|. +|++++++ .+.+.....++.... .. .....++. +.
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~ 68 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGA-------RLLLVGRN----AEKLEALAARLPYPG-RHRWVVADLTSEAGR 68 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHhcCC-ceEEEEccCCCHHHH
Confidence 334457899999999999999999999887 89999998 443433222221100 00 00001110 00
Q ss_pred ------ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582 78 ------ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN 134 (329)
Q Consensus 78 ------~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN 134 (329)
.+.+...|+||+++|..... ..+ ....+..|+.....+.+.+.++. .+.+.+++++.
T Consensus 69 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 69 EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 01135679999998864321 112 22345567665555555544322 12345666654
No 226
>KOG2305|consensus
Probab=97.25 E-value=0.00028 Score=61.45 Aligned_cols=111 Identities=19% Similarity=0.146 Sum_probs=73.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CC----------ccceEe
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PL----------LVDVSV 73 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~----------~~~i~~ 73 (329)
.-||+|+|. |-+|+++|..++..|+ +|.|||+.+.+....++....|+..... .. +..++.
T Consensus 3 ~~ki~ivgS-gl~g~~WAmlFAs~Gy-------qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~ 74 (313)
T KOG2305|consen 3 FGKIAIVGS-GLVGSSWAMLFASSGY-------QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISG 74 (313)
T ss_pred ccceeEeec-ccccchHHHHHhccCc-------eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhC
Confidence 469999996 9999999999999998 9999999843333333433444433210 11 135667
Q ss_pred ecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 74 HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 74 ~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
|+++.|..++|=.|=.+ +.+.+...+++.+++.+...|.. |+.|-...+|
T Consensus 75 t~~l~E~vk~Ai~iQEc--------------vpE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~m 124 (313)
T KOG2305|consen 75 TTSLNELVKGAIHIQEC--------------VPEDLNLKKQLYKQLDEIADPTT--ILASSTSTFM 124 (313)
T ss_pred CccHHHHHhhhhhHHhh--------------chHhhHHHHHHHHHHHHhcCCce--EEeccccccC
Confidence 78888888887443222 34556778888899999875554 3454444333
No 227
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.24 E-value=0.0022 Score=59.17 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=64.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC-cccc-----c
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN-PITA-----F 81 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~-~~~a-----l 81 (329)
|.|+||+|++|++++..|+..|.- .+.++|..... .....-...|+.+.. -..+ ..++ +
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~------~v~~~~~~~~~-~~~~~~~~~~~~d~~--------~~~~~~~~~~~~~~~ 66 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGIT------DILVVDNLKDG-TKFVNLVDLDIADYM--------DKEDFLAQIMAGDDF 66 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCc------eEEEecCCCcc-hHHHhhhhhhhhhhh--------hHHHHHHHHhccccc
Confidence 789999999999999999998761 46777875210 000000111222110 0011 1112 2
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
.++|+||++|+.+.............|+....++.+.+.+.. . .+|..|
T Consensus 67 ~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~--~~i~~S 115 (308)
T PRK11150 67 GDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYAS 115 (308)
T ss_pred CCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C--cEEEEc
Confidence 378999999875433333344567889999999999988753 2 455554
No 228
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.24 E-value=0.0016 Score=66.95 Aligned_cols=122 Identities=15% Similarity=0.058 Sum_probs=68.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc-ccCC-ccceEeecCcccc-
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC-IFPL-LVDVSVHENPITA- 80 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~-~~~~-~~~i~~~~~~~~a- 80 (329)
+++||.|+||+|++|++++..|++.+.- .+|+.+|... ....+... ...... ...+ ..++.-.......
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~-----~~V~~~d~~~--~~~~~~~l-~~~~~~~~v~~~~~Dl~d~~~~~~~~ 76 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPD-----YKIVVLDKLD--YCSNLKNL-NPSKSSPNFKFVKGDIASADLVNYLL 76 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCC-----CEEEEEeCCC--ccchhhhh-hhcccCCCeEEEECCCCChHHHHHHH
Confidence 4589999999999999999999986321 1899898751 00111100 000000 0000 0011100011112
Q ss_pred -cCCccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 81 -FKDANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 81 -l~~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+.|+||++|+..... .....+....|+.....+++.+++.. .-..+|.+|-
T Consensus 77 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS 132 (668)
T PLN02260 77 ITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVST 132 (668)
T ss_pred hhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcc
Confidence 25899999998864321 11234566789999999999988763 2235555553
No 229
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0017 Score=56.74 Aligned_cols=32 Identities=31% Similarity=0.209 Sum_probs=29.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|..++..|++. . +|++++++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-------~V~~~~r~ 35 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-------TLLLGGRP 35 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-------CEEEEeCC
Confidence 58999999999999999999987 4 79999998
No 230
>PRK06128 oxidoreductase; Provisional
Probab=97.23 E-value=0.0015 Score=60.30 Aligned_cols=120 Identities=15% Similarity=0.095 Sum_probs=69.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC------
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN------ 76 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~------ 76 (329)
+++.|+||+|.+|.+++..|+..|. +|++.+++.. ....+.....+....... ..++.-..+
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~-------~V~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 126 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGA-------DIALNYLPEE--EQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVE 126 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCC-------EEEEEeCCcc--hHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH
Confidence 6899999999999999999999887 8888776511 111222222222211000 001110011
Q ss_pred -cccccCCccEEEEeCCCCC--CC--CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 77 -PITAFKDANIAILIGSFPR--KS--NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 77 -~~~al~~aDiVi~~~g~~~--~~--g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+.+...|++|+.+|... .+ .. .....+..|+.....+++.+.++..+.+.||+++-
T Consensus 127 ~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 127 RAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred HHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 1122446899999988642 21 11 23455677887777777777665434556666654
No 231
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0026 Score=56.55 Aligned_cols=117 Identities=12% Similarity=0.041 Sum_probs=64.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc----cceEeecCccccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL----VDVSVHENPITAF 81 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~----~~i~~~~~~~~al 81 (329)
+++.|+||+|++|.+++..|++.|. +|.++|++ .+.+.....++........ .++.-..+..+.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 70 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-------RLYLAARD----VERLERLADDLRARGAVAVSTHELDILDTASHAAFL 70 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-------EEEEEeCC----HHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHH
Confidence 3799999999999999999999887 89999998 3334333333322110000 0111111111122
Q ss_pred ----CCccEEEEeCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEc
Q psy9582 82 ----KDANIAILIGSFPRK---SNMERS---ELLAINSSIFIEQGKALNSVA--SRDVKVLVVG 133 (329)
Q Consensus 82 ----~~aDiVi~~~g~~~~---~g~~~~---~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~t 133 (329)
+..|++|+.+|.... ...+.. ..+..|+.....+.+.+.++. ...+.++++|
T Consensus 71 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 134 (243)
T PRK07102 71 DSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS 134 (243)
T ss_pred HHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 235999998775321 122332 345566665555555544432 1235566555
No 232
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0014 Score=67.21 Aligned_cols=107 Identities=15% Similarity=0.169 Sum_probs=63.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHh--CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-CccceEe-----ecCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIAN--GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LLVDVSV-----HENP 77 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~--~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~~~i~~-----~~~~ 77 (329)
|||.|+||+|++|++++..|+. .+. +|++++++. ....+........+.... ...++.- ....
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-------~V~~l~R~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~ 71 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA-------TVHVLVRRQ--SLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEAD 71 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC-------EEEEEECcc--hHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHH
Confidence 4799999999999999999994 444 899999872 111121111000000000 0001100 0111
Q ss_pred ccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 78 ITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
.+.++++|+||++++... ...+..+....|+...+.+++.+.+.
T Consensus 72 ~~~l~~~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~ 115 (657)
T PRK07201 72 IAELGDIDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERL 115 (657)
T ss_pred HHHhcCCCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhc
Confidence 223489999999987532 12334556678999999999988876
No 233
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0031 Score=57.30 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=33.3
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||. +.+++.|+||+|++|.+++..|++.|. +|++++++
T Consensus 1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~ 39 (273)
T PRK08278 1 MMSLSGKTLFITGASRGIGLAIALRAARDGA-------NIVIAAKT 39 (273)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence 553 457899999999999999999999887 89999987
No 234
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0014 Score=59.47 Aligned_cols=117 Identities=13% Similarity=0.049 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------C
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------N 76 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~ 76 (329)
+.++|.|+||+|.+|..++..|++.|. .|.+.+++ .++++....++.... ....++.-.. .
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 71 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGA-------RVAIGDLD----EALAKETAAELGLVV-GGPLDVTDPASFAAFLDA 71 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHhccce-EEEccCCCHHHHHHHHHH
Confidence 346899999999999999999999887 89999988 444443322222110 0000110000 1
Q ss_pred cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 77 PITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+...+.|++|+.+|..... ..+ ....+..|+. ..+.+.+.+.+. ..+.|+++|-
T Consensus 72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~g~iv~isS 137 (273)
T PRK07825 72 VEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR--GRGHVVNVAS 137 (273)
T ss_pred HHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEcC
Confidence 122235789999998864321 111 2334556665 344445555543 3456666653
No 235
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.19 E-value=0.005 Score=54.84 Aligned_cols=118 Identities=16% Similarity=0.180 Sum_probs=67.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEee-------
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVH------- 74 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~------- 74 (329)
+.+++.|+||+|++|.+++..|++.|. +|+++|++ .+.+.....++.+...... ....+.
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~ 79 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGA-------TVILLGRT----EEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNY 79 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------cEEEEeCC----HHHHHHHHHHHHhcCCCCceEEEecccCCCHHHH
Confidence 347899999999999999999999886 89999998 4444444444443211100 011111
Q ss_pred ----cCcccccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHH----HhhhcCCCeEEEEEcC
Q psy9582 75 ----ENPITAFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQGKA----LNSVASRDVKVLVVGN 134 (329)
Q Consensus 75 ----~~~~~al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i~~~----i~~~~~p~a~viv~tN 134 (329)
....+.+...|+||+.++.... + ..+ ....+..|+.....+.+. +.+. +...|++.+.
T Consensus 80 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~--~~~~iv~~ss 152 (247)
T PRK08945 80 QQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS--PAASLVFTSS 152 (247)
T ss_pred HHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEEcc
Confidence 0112234467999998875321 1 122 233455666654444443 3432 3456666664
No 236
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.19 E-value=0.0031 Score=50.53 Aligned_cols=73 Identities=19% Similarity=0.259 Sum_probs=46.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
+||+|+|++|.+|+.++..+....-+ + +..+|.+ .....+ .|+.+........+.++.++.+.+..+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~------~lv~~v~~~----~~~~~g--~d~g~~~~~~~~~~~v~~~l~~~~~~~ 68 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGF------ELVGAVDRK----PSAKVG--KDVGELAGIGPLGVPVTDDLEELLEEA 68 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTE------EEEEEEETT----TSTTTT--SBCHHHCTSST-SSBEBS-HHHHTTH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCc------EEEEEEecC----Cccccc--chhhhhhCcCCcccccchhHHHhcccC
Confidence 58999999999999999999984332 5 4556666 211222 233332211123566678888899999
Q ss_pred cEEEEe
Q psy9582 85 NIAILI 90 (329)
Q Consensus 85 DiVi~~ 90 (329)
|+||-.
T Consensus 69 DVvIDf 74 (124)
T PF01113_consen 69 DVVIDF 74 (124)
T ss_dssp SEEEEE
T ss_pred CEEEEc
Confidence 999875
No 237
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.01 Score=53.59 Aligned_cols=118 Identities=11% Similarity=0.081 Sum_probs=67.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CC-ccceEee--cCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PL-LVDVSVH--ENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~-~~~i~~~--~~~~~a 80 (329)
.+.+.|+||+|.+|.+++..|++.|. +|.+.|++ .+.++....++..... .. .....++ .+..+.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~ 76 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGA-------DVILLSRN----EENLKKAREKIKSESNVDVSYIVADLTKREDLERT 76 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence 35789999999999999999999987 89999998 4444433333322100 00 0001111 111111
Q ss_pred ------cCCccEEEEeCCCCCCC---CCC---HHHHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 81 ------FKDANIAILIGSFPRKS---NME---RSELLAIN----SSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 81 ------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
+...|++|..+|.+... ..+ ....+..| ...++.+.+.+++. ..+.||++|-.
T Consensus 77 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~--~~g~Ii~isS~ 145 (263)
T PRK08339 77 VKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK--GFGRIIYSTSV 145 (263)
T ss_pred HHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEcCc
Confidence 23579999988864321 122 22334444 34566667777653 34566666543
No 238
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0014 Score=59.36 Aligned_cols=34 Identities=12% Similarity=0.207 Sum_probs=31.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|++|++++..|++.|. +|.+++++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~-------~V~~~~r~ 40 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA-------AVMIVGRN 40 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCC
Confidence 47999999999999999999999987 89999987
No 239
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.19 E-value=0.0014 Score=58.48 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=32.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||-+.++|.|+||+|++|++++..|+..|. +|++.+.+
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~-------~vv~~~~~ 38 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGA-------RVVVNYHQ 38 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCC-------eEEEEcCC
Confidence 676668999999999999999999999887 78776654
No 240
>PLN02253 xanthoxin dehydrogenase
Probab=97.18 E-value=0.0018 Score=58.94 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|.+++..|+..|. +|+++|++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~-------~v~~~~~~ 51 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA-------KVCIVDLQ 51 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence 36799999999999999999999887 89999987
No 241
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0028 Score=57.73 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc---
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI--- 78 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~--- 78 (329)
.+.+.|+||+|++|.+++..|+..|. +|++.|++ .+.++....++....... ..++.-..+..
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~-------~Vv~~~r~----~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~ 74 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGA-------RVVLGDVD----KPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLA 74 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 45799999999999999999999987 89999998 444443333343211000 01111111111
Q ss_pred ----cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhcCCCeEEEEEcC
Q psy9582 79 ----TAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQG----KALNSVASRDVKVLVVGN 134 (329)
Q Consensus 79 ----~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~----~~i~~~~~p~a~viv~tN 134 (329)
+.+...|++|+.+|..... ..+ ....+..|+.....+. +.+.+.. ..+.|++++.
T Consensus 75 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~-~~g~iv~isS 143 (275)
T PRK05876 75 DEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG-TGGHVVFTAS 143 (275)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCC
Confidence 1233579999998864311 122 2234556665444444 4444432 2456666654
No 242
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.001 Score=59.69 Aligned_cols=122 Identities=14% Similarity=0.089 Sum_probs=64.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPI 78 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~ 78 (329)
|..++++.|+||+|++|.+++..|++.|. ++++.+... .+.+......+....... ..++.-..+..
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 75 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGF-------DVAVHYNRS---RDEAEALAAEIRALGRRAVALQADLADEAEVR 75 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC---HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 34457899999999999999999999886 788877641 222222222222111000 00111011111
Q ss_pred cc-------cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcC--CCeEEEEEc
Q psy9582 79 TA-------FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVAS--RDVKVLVVG 133 (329)
Q Consensus 79 ~a-------l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~--p~a~viv~t 133 (329)
++ +...|+||+++|..... ..+ ....+..|+.....+.+.+.++.. ..+.+++++
T Consensus 76 ~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 76 ALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred HHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 12 23469999998864321 122 234566776655555555444321 234555543
No 243
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.002 Score=57.18 Aligned_cols=35 Identities=31% Similarity=0.320 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++++.|+||+|.+|..++..|++.|. +|++++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~ 39 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-------DLALVARS 39 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 346899999999999999999999887 89999998
No 244
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.001 Score=59.79 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=30.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|..++..|++.|. +|+++|++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~-------~v~~~~r~ 35 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA-------TLGLVARR 35 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 4799999999999999999999887 89999998
No 245
>PRK09186 flagellin modification protein A; Provisional
Probab=97.16 E-value=0.0014 Score=58.50 Aligned_cols=37 Identities=35% Similarity=0.407 Sum_probs=32.8
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
|| +.+++.|+||+|.+|.+++..|+..|. +|++.+++
T Consensus 1 ~~-~~k~vlItGas~giG~~~a~~l~~~g~-------~v~~~~r~ 37 (256)
T PRK09186 1 ML-KGKTILITGAGGLIGSALVKAILEAGG-------IVIAADID 37 (256)
T ss_pred CC-CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecC
Confidence 44 457999999999999999999999887 89999987
No 246
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.15 E-value=0.0027 Score=56.48 Aligned_cols=117 Identities=16% Similarity=0.174 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccc--
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT-- 79 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~-- 79 (329)
.+++.|+||+|++|+.++..|++.|. +|+++|++ .+.......++....... ..++.-..+..+
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 71 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA-------KVAVFDLN----REAAEKVAADIRAKGGNAQAFACDITDRDSVDTAV 71 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 36899999999999999999999887 89999998 333333333333211000 001100011111
Q ss_pred -----ccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEcC
Q psy9582 80 -----AFKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKAL----NSVASRDVKVLVVGN 134 (329)
Q Consensus 80 -----al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~tN 134 (329)
.+...|+||+.+|..... ..+. ...+..|+.....+.+.+ ++. +...+++++.
T Consensus 72 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~iss 139 (250)
T TIGR03206 72 AAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER--GAGRIVNIAS 139 (250)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEECc
Confidence 123579999988753211 1122 234566666555554444 343 2345555554
No 247
>PRK06398 aldose dehydrogenase; Validated
Probab=97.15 E-value=0.0012 Score=59.54 Aligned_cols=116 Identities=8% Similarity=0.098 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.+++.|+||+|.+|.+++..|+..|. +|+++++++.. ...+.....|+.+... . .. ......+.+...
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~-------~Vi~~~r~~~~-~~~~~~~~~D~~~~~~-i-~~--~~~~~~~~~~~i 73 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGS-------NVINFDIKEPS-YNDVDYFKVDVSNKEQ-V-IK--GIDYVISKYGRI 73 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCccc-cCceEEEEccCCCHHH-H-HH--HHHHHHHHcCCC
Confidence 47899999999999999999999887 89999987311 1111112233332110 0 00 001112234578
Q ss_pred cEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRK-S--NME---RSELLAINSSIFI----EQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~tN 134 (329)
|++|+.+|.... + ..+ ....+..|+.... .+.+.+.+. ..+.||+++-
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS 131 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ--DKGVIINIAS 131 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeCc
Confidence 999999886431 1 112 2334556665444 444444442 3456666653
No 248
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0016 Score=58.39 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+++.|+||+|++|++++..|++.|. +|++++++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~-------~V~~~~r~ 44 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA-------RVHVCDVS 44 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 347999999999999999999999887 89999998
No 249
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0079 Score=53.69 Aligned_cols=124 Identities=15% Similarity=0.121 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee-----
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH----- 74 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~----- 74 (329)
||+ .+++.|+||+|++|.+++..|+..|. +|.+.+.+. .+.++....++....... .....++
T Consensus 1 ~~~-~k~~lItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 69 (252)
T PRK12747 1 MLK-GKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR---KEEAEETVYEIQSNGGSAFSIGANLESLHGV 69 (252)
T ss_pred CCC-CCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcCCC---HHHHHHHHHHHHhcCCceEEEecccCCHHHH
Confidence 443 46899999999999999999999887 788875431 233333333332211000 0000000
Q ss_pred ----cCccc----c--cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 75 ----ENPIT----A--FKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 75 ----~~~~~----a--l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
.+..+ . ....|++|+.+|.... + ..+ ....+..|+.....+.+.+.+.....+.||++|--
T Consensus 70 ~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~ 146 (252)
T PRK12747 70 EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 146 (252)
T ss_pred HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence 00111 1 1268999999886321 1 112 23445667665555555444432234566666543
No 250
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.13 E-value=0.0042 Score=56.41 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=30.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|.+++..|+..|. +|+++|++
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~-------~V~~~~r~ 43 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGA-------KVAILDRN 43 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 6899999999999999999999887 89999998
No 251
>PRK06182 short chain dehydrogenase; Validated
Probab=97.13 E-value=0.0019 Score=58.55 Aligned_cols=113 Identities=11% Similarity=0.041 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc---
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA--- 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a--- 80 (329)
.+++.|+||+|++|.+++..|++.|. +|++.+++ .+++.... ...... ..++.-..+..+.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~----~~~l~~~~----~~~~~~~~~Dv~~~~~~~~~~~~ 67 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY-------TVYGAARR----VDKMEDLA----SLGVHPLSLDVTDEASIKAAVDT 67 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHH----hCCCeEEEeeCCCHHHHHHHHHH
Confidence 36899999999999999999999887 89999988 43333211 100000 0111111111122
Q ss_pred ----cCCccEEEEeCCCCCC-C--CC---CHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 81 ----FKDANIAILIGSFPRK-S--NM---ERSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 81 ----l~~aDiVi~~~g~~~~-~--g~---~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+.|++|+.+|.... + .. .....+..|... ++.+.+.+++.. .+.|++++-
T Consensus 68 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS 133 (273)
T PRK06182 68 IIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISS 133 (273)
T ss_pred HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcc
Confidence 2378999999886431 1 11 233445556544 555666666542 345566653
No 252
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.13 E-value=0.0039 Score=56.19 Aligned_cols=105 Identities=15% Similarity=0.216 Sum_probs=63.3
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-CccE
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-DANI 86 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-~aDi 86 (329)
|+|+||+|.||+++...|.+.|. +|.++-++ ..+.... + +. .++.-..+.+... ++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-------~v~iltR~----~~~~~~~---~-~~------~v~~~~~~~~~~~~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-------QVTILTRR----PPKASQN---L-HP------NVTLWEGLADALTLGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-------eEEEEEcC----Ccchhhh---c-Cc------cccccchhhhcccCCCCE
Confidence 68999999999999999999988 89999988 3322211 1 10 1111112222333 7999
Q ss_pred EEEeCCCCC--CC-CCC-HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 87 AILIGSFPR--KS-NME-RSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 87 Vi~~~g~~~--~~-g~~-~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
||..||.|- +. ... ...+..--+...+.+.+.|.+.-.+-..+|+.|
T Consensus 60 vINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaS 110 (297)
T COG1090 60 VINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISAS 110 (297)
T ss_pred EEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecc
Confidence 999999763 21 111 223344455677777777775432222445544
No 253
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0055 Score=57.63 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=66.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCcc----
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPI---- 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~---- 78 (329)
++|.|+||+|.+|..++..|+..|. +|++++++ .++++....++........ ....++ .+..
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~-------~Vvl~~R~----~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~ 77 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGA-------KVVLLARG----EEGLEALAAEIRAAGGEALAVVADVADAEAVQAAAD 77 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHH
Confidence 6899999999999999999999987 89999998 4555544444432210100 001111 1111
Q ss_pred ---cccCCccEEEEeCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 79 ---TAFKDANIAILIGSFPRKS---NMER---SELLAIN----SSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 79 ---~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+.+...|++|+.+|..... ..+. ...+..| +...+.+.+.+.+. ..+.||+++-
T Consensus 78 ~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~--~~g~iV~isS 144 (334)
T PRK07109 78 RAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR--DRGAIIQVGS 144 (334)
T ss_pred HHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEeCC
Confidence 1234679999988864211 1121 2233444 33455566666653 2356666653
No 254
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.12 E-value=0.0029 Score=55.04 Aligned_cols=34 Identities=26% Similarity=0.545 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||+|+|+ |.+|+.++..|+..|. + +|+|+|.+
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gv-g-----~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGI-G-----KLILVDFD 54 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC-C-----EEEEECCC
Confidence 468999999 9999999999999987 3 79999988
No 255
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.12 E-value=0.0078 Score=53.92 Aligned_cols=118 Identities=8% Similarity=0.097 Sum_probs=66.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc--CC-ccceEeec--Ccc--
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF--PL-LVDVSVHE--NPI-- 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~--~~-~~~i~~~~--~~~-- 78 (329)
++|.|+||+|.+|.+++..|++.|. +|+++|++ ...++....++..... .. .....++. +..
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~-------~vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 71 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY-------RVAVADIN----SEKAANVAQEINAEYGEGMAYGFGADATSEQSVLAL 71 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHH
Confidence 4799999999999999999999887 89999988 3333333223322110 00 00111111 111
Q ss_pred -----cccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 79 -----TAFKDANIAILIGSFPRKS---NMER---SELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 79 -----~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
+.+...|+||+++|.+... ..+. ...+..|+.. .+.+.+.+.+.. +++.+++++..
T Consensus 72 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~~ss~ 142 (259)
T PRK12384 72 SRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-IQGRIIQINSK 142 (259)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCcEEEEecCc
Confidence 1124579999998865421 1222 2334455554 445555555432 34577776654
No 256
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=97.12 E-value=0.00061 Score=61.90 Aligned_cols=120 Identities=16% Similarity=0.176 Sum_probs=76.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhC----CCCCCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANG----DLLGKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~ 78 (329)
.||.|.|| |..|..++.+|... |+- .++ .-.++++|.+- .++...+......+.+.. .. ....++.
T Consensus 26 ~~iv~~GA-GsAg~gia~ll~~~~~~~G~~-~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~----~~-~~~~~L~ 98 (279)
T cd05312 26 QRILFLGA-GSAGIGIADLIVSAMVREGLS-EEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD----EE-KEGKSLL 98 (279)
T ss_pred cEEEEECc-CHHHHHHHHHHHHHHHHcCCC-hhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc----Cc-ccCCCHH
Confidence 69999999 99999999988765 652 111 12899999871 000111211222222111 00 1235788
Q ss_pred cccC--CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582 79 TAFK--DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA 147 (329)
Q Consensus 79 ~al~--~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~ 147 (329)
++++ ++|++|=+.+.+ | -+.+++.+.|.+++ ++.+|.-.|||.. +...-+.+.+
T Consensus 99 e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~-~~PIIFaLSNPt~~~E~~pe~a~~~t 157 (279)
T cd05312 99 EVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSN-ERPIIFALSNPTSKAECTAEDAYKWT 157 (279)
T ss_pred HHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcC-CCCEEEECCCcCCccccCHHHHHHhh
Confidence 9999 899988654433 2 25567788888887 8899999999974 5555566655
No 257
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0023 Score=58.06 Aligned_cols=115 Identities=12% Similarity=0.082 Sum_probs=64.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--Cc------
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--NP------ 77 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~~------ 77 (329)
+++.|+||+|++|++++..|++.|. .|.+++++ .+.+........... .. ....++. +.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~~ 69 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-------RVAATVRR----PDALDDLKARYGDRL-WV-LQLDVTDSAAVRAVVDR 69 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHhccCce-EE-EEccCCCHHHHHHHHHH
Confidence 4799999999999999999999887 89999987 333322111110000 00 0011111 11
Q ss_pred -ccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEc
Q psy9582 78 -ITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVG 133 (329)
Q Consensus 78 -~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~t 133 (329)
.+.+.+.|+||+++|...... .+ ....+..|+.....+.+.+.++. ...+.+|++|
T Consensus 70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s 134 (276)
T PRK06482 70 AFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVS 134 (276)
T ss_pred HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 112346799999988654211 11 23455677777777776653221 1233555554
No 258
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0016 Score=57.86 Aligned_cols=117 Identities=16% Similarity=0.187 Sum_probs=64.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC---
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--- 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--- 82 (329)
.++.|+||+|++|..++..|+..|. +|.++|++ .++++.......+.. ....+++-..+..++++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 69 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-------QVIACGRN----QSVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLP 69 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-------EEEEEECC----HHHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcc
Confidence 4699999999999999999999887 89999998 444432211111100 00001111111122222
Q ss_pred -CccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 83 -DANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 83 -~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.-|.+|+.+|.... + ..+ ....+..|......+.+.+.....+...+++++.
T Consensus 70 ~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS 128 (240)
T PRK06101 70 FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGS 128 (240)
T ss_pred cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEec
Confidence 24777777664321 1 122 2345677877777777766654323445555543
No 259
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.11 E-value=0.00065 Score=59.79 Aligned_cols=165 Identities=16% Similarity=0.154 Sum_probs=91.1
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH-hhhhhcccCCccceEeecCcccccCCc--
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI-MEIEDCIFPLLVDVSVHENPITAFKDA-- 84 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~-~dl~~~~~~~~~~i~~~~~~~~al~~a-- 84 (329)
|.|+||+|++|++++..|+..+. +++.+.... ........ .++.... .++.-.....+.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~----~dl~~~~~~~~~~~~~~~ 66 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-------EVIVLSRSS---NSESFEEKKLNVEFVI----GDLTDKEQLEKLLEKANI 66 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-------EEEEEESCS---TGGHHHHHHTTEEEEE----SETTSHHHHHHHHHHHTE
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-------ccccccccc---cccccccccceEEEEE----eeccccccccccccccCc
Confidence 78999999999999999999987 766555552 11111010 0111000 0111112234556666
Q ss_pred cEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHHHH----HHHHCCCCCCCcEEEe
Q psy9582 85 NIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYI----TMKSAPDLSYKNFTAM 158 (329)
Q Consensus 85 DiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~~~----~~~~~~~~~~~~i~~~ 158 (329)
|.||++++.+. .......+....|+...+.+.+.+.+.. . ..+|..+.. .+.... +.+.+ .+.+....+.
T Consensus 67 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~~i~~sS~-~~y~~~~~~~~~e~~-~~~~~~~Y~~ 142 (236)
T PF01370_consen 67 DVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-V-KRFIFLSSA-SVYGDPDGEPIDEDS-PINPLSPYGA 142 (236)
T ss_dssp SEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-T-SEEEEEEEG-GGGTSSSSSSBETTS-GCCHSSHHHH
T ss_pred eEEEEeecccccccccccccccccccccccccccccccccc-c-ccccccccc-ccccccccccccccc-cccccccccc
Confidence 99999987653 1113456778899999999999999984 4 345555432 110000 00000 0001111223
Q ss_pred chhHHHHHHHHHHHHhCCCCCCeeEEEEEecC
Q psy9582 159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNH 190 (329)
Q Consensus 159 t~lds~r~~~~la~~l~~~~~~v~~~~v~G~h 190 (329)
+-....++....+++.+++...++...+.|-+
T Consensus 143 ~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 143 SKRAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccccccccccccc
Confidence 33333455555666667777777776677765
No 260
>PRK12320 hypothetical protein; Provisional
Probab=97.10 E-value=0.0018 Score=66.34 Aligned_cols=101 Identities=10% Similarity=0.124 Sum_probs=64.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||.|+||+|++|++++..|+..|. +|+.+|+. ...... .++. . ...++.-. ...++++++|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~-------~Vi~ldr~----~~~~~~--~~ve-~---v~~Dl~d~-~l~~al~~~D 62 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH-------TVSGIAQH----PHDALD--PRVD-Y---VCASLRNP-VLQELAGEAD 62 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCC----hhhccc--CCce-E---EEccCCCH-HHHHHhcCCC
Confidence 4899999999999999999999887 89999986 211100 0000 0 00011101 1345678899
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+||++++... .. ....|+....++++.+++.. . .+|.+|
T Consensus 63 ~VIHLAa~~~--~~----~~~vNv~Gt~nLleAA~~~G-v--RiV~~S 101 (699)
T PRK12320 63 AVIHLAPVDT--SA----PGGVGITGLAHVANAAARAG-A--RLLFVS 101 (699)
T ss_pred EEEEcCccCc--cc----hhhHHHHHHHHHHHHHHHcC-C--eEEEEE
Confidence 9999986521 11 12468888888988888763 3 444544
No 261
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.10 E-value=0.0033 Score=58.75 Aligned_cols=46 Identities=26% Similarity=0.346 Sum_probs=38.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~ 61 (329)
...+.|+||+|++|.++|..|++.|. +|.+++++ .++++....++.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~-------~Vil~~R~----~~~l~~~~~~l~ 98 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL-------NLVLVARN----PDKLKDVSDSIQ 98 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------CEEEEECC----HHHHHHHHHHHH
Confidence 36789999999999999999999987 89999999 556665555554
No 262
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.10 E-value=0.00055 Score=60.75 Aligned_cols=73 Identities=16% Similarity=0.288 Sum_probs=46.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc-cCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA-FKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a-l~~a 84 (329)
|+++|+|+ |.+|+++|..|...|. +|+++|.+ +++++....+-.+.. ....+-+-..-+.++ +.++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~-------~Vv~Id~d----~~~~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~a 67 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH-------NVVLIDRD----EERVEEFLADELDTH-VVIGDATDEDVLEEAGIDDA 67 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC-------ceEEEEcC----HHHHHHHhhhhcceE-EEEecCCCHHHHHhcCCCcC
Confidence 58999999 9999999999999988 89999999 555543222111111 000011011123333 7889
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|.++.+.
T Consensus 68 D~vva~t 74 (225)
T COG0569 68 DAVVAAT 74 (225)
T ss_pred CEEEEee
Confidence 9999874
No 263
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0022 Score=57.42 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=33.4
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||. +.+++.|+||+|.+|.+++..|+..|. +|+++|++
T Consensus 1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~-------~v~~~~r~ 39 (252)
T PRK07856 1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGA-------TVVVCGRR 39 (252)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 453 457899999999999999999999887 89999998
No 264
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0068 Score=53.68 Aligned_cols=109 Identities=19% Similarity=0.230 Sum_probs=60.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c--cceEeecCcccc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L--VDVSVHENPITA- 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~--~~i~~~~~~~~a- 80 (329)
.++|.|+||+|++|.+++..|++.|. ++++++.......+.+.....++....... . .++.-..+..+.
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGA-------DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAAL 78 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 47899999999999999999999887 899988652111222222222222111000 0 000000111111
Q ss_pred ------cCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHh
Q psy9582 81 ------FKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALN 120 (329)
Q Consensus 81 ------l~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~ 120 (329)
....|.||+++|.... + ..+ ....+..|......+++.+.
T Consensus 79 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 79 DAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 2468999999886441 1 112 22345677777777776665
No 265
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0028 Score=57.39 Aligned_cols=116 Identities=14% Similarity=0.120 Sum_probs=64.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCcc----
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPI---- 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~---- 78 (329)
++|.|+||+|.+|+.++..|++.|. +|.+.+++ .+.++....++....... ......+ .+..
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 69 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-------RLALADVN----EEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQ 69 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 3699999999999999999999987 89999988 444443333333211000 0000110 0111
Q ss_pred ---cccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 79 ---TAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 79 ---~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
+.+...|+||+.+|..... ..+ ....+..|+. ..+.+.+.+++. ..+.|+++|-
T Consensus 70 ~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS 136 (270)
T PRK05650 70 ACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ--KSGRIVNIAS 136 (270)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEECC
Confidence 1234689999998864321 112 2234556654 334444555553 2345556553
No 266
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.09 E-value=0.0022 Score=59.25 Aligned_cols=114 Identities=14% Similarity=0.131 Sum_probs=65.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccccC--
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITAFK-- 82 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~al~-- 82 (329)
||.|+||+|++|+.++..|++.+. +|+++|... ..... ....+.+.. ... ..++.-..+..++++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~-------~V~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 69 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH-------EVVVLDNLS---NGSPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEH 69 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC-------eEEEEeCCC---ccchh-hhhhhccccceEEEECCCCCHHHHHHHHHhC
Confidence 689999999999999999999886 788888641 11111 111111100 000 001111112223333
Q ss_pred CccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 83 DANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+.|+||+++|..... .....+.+..|+.....+++.+.+.. .. .++++|
T Consensus 70 ~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~s 120 (328)
T TIGR01179 70 KIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VK-KFIFSS 120 (328)
T ss_pred CCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CC-EEEEec
Confidence 689999998864321 12333456788888899988888763 33 344444
No 267
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0043 Score=55.40 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=47.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCcccccC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPITAFK 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~~al~ 82 (329)
++|.|+||+|.+|..++..|++.|. +|++.+++ ...+.....+......... ....++ .+..+++.
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH-------NVIAGVQI----APQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE 71 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc
Confidence 3799999999999999999999887 89998887 3323222111111110110 011111 12223343
Q ss_pred -CccEEEEeCCCCC
Q psy9582 83 -DANIAILIGSFPR 95 (329)
Q Consensus 83 -~aDiVi~~~g~~~ 95 (329)
+.|+||+.+|...
T Consensus 72 ~~id~vi~~ag~~~ 85 (257)
T PRK09291 72 WDVDVLLNNAGIGE 85 (257)
T ss_pred CCCCEEEECCCcCC
Confidence 7999999988653
No 268
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0066 Score=55.11 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=30.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+.|+||+|.+|.+++..|+..|. +|++++++
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~-------~V~~~~r~ 36 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY-------LVIATMRN 36 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC-------EEEEEeCC
Confidence 4799999999999999999999887 89999987
No 269
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.005 Score=55.16 Aligned_cols=106 Identities=16% Similarity=0.041 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA 80 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a 80 (329)
+..++.|+||+|.+|.+++..|++.|. ++++.+++ .... ....++....... ..++.-..+..+.
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-------~v~~~~r~----~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-------IPVIFGRS----APDD-EFAEELRALQPRAEFVQVDLTDDAQCRDA 73 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-------cEEEEcCC----hhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 346899999999999999999999987 78999887 3333 2233333211010 0111101111122
Q ss_pred c-------CCccEEEEeCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhh
Q psy9582 81 F-------KDANIAILIGSFPRKSN-----MERSELLAINSSIFIEQGKALNS 121 (329)
Q Consensus 81 l-------~~aDiVi~~~g~~~~~g-----~~~~~~~~~n~~~~~~i~~~i~~ 121 (329)
+ ...|+||+++|...... .+....+..|+.....+.+.+.+
T Consensus 74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (258)
T PRK08628 74 VEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLP 126 (258)
T ss_pred HHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 2 35799999988543221 12334456676655555554443
No 270
>KOG1205|consensus
Probab=97.07 E-value=0.0035 Score=57.20 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=79.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEeecC--
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVHEN-- 76 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~~~-- 76 (329)
..+.|.|+|||+++|.++|+.|+..|. .++|+.+. .++++....++....... . .+++-..+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-------~l~lvar~----~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~ 79 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-------KLVLVARR----ARRLERVAEELRKLGSLEKVLVLQLDVSDEESVK 79 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-------ceEEeehh----hhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHH
Confidence 357889999999999999999999998 78999888 666765556665433111 0 11111111
Q ss_pred -----cccccCCccEEEEeCCCCCCCCC----C---HHHHHHH----HHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 77 -----PITAFKDANIAILIGSFPRKSNM----E---RSELLAI----NSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 77 -----~~~al~~aDiVi~~~g~~~~~g~----~---~~~~~~~----n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
...-+.+.|+.|.-||..+ .+. + ....++. .+...+...+.|++. + ++-|++++...+
T Consensus 80 ~~~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-~-~GhIVvisSiaG 153 (282)
T KOG1205|consen 80 KFVEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-N-DGHIVVISSIAG 153 (282)
T ss_pred HHHHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-C-CCeEEEEecccc
Confidence 1234679999999999877 321 1 2223443 456778888888886 3 677777776554
No 271
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=97.07 E-value=0.0017 Score=64.08 Aligned_cols=100 Identities=14% Similarity=0.149 Sum_probs=63.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK-- 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~-- 82 (329)
..+|++||- |.||+++|..|+..|. +|++||++ .++.+..+....... ...+....+..+..+
T Consensus 6 ~~~IG~IGL-G~MG~~mA~nL~~~G~-------~V~V~NRt----~~k~~~l~~~~~~~G---a~~~~~a~s~~e~v~~l 70 (493)
T PLN02350 6 LSRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRT----TSKVDETVERAKKEG---NLPLYGFKDPEDFVLSI 70 (493)
T ss_pred CCCEEEEee-HHHHHHHHHHHHhCCC-------eEEEECCC----HHHHHHHHHhhhhcC---CcccccCCCHHHHHhcC
Confidence 468999998 9999999999999998 89999998 555443221111101 011223334444444
Q ss_pred -CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 83 -DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 83 -~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.+|+||++-... +.++++...+.....++.++|-.||
T Consensus 71 ~~~dvIi~~v~~~---------------~aV~~Vi~gl~~~l~~G~iiID~sT 108 (493)
T PLN02350 71 QKPRSVIILVKAG---------------APVDQTIKALSEYMEPGDCIIDGGN 108 (493)
T ss_pred CCCCEEEEECCCc---------------HHHHHHHHHHHhhcCCCCEEEECCC
Confidence 599999973211 2444444444444457778888886
No 272
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.07 E-value=0.0024 Score=52.73 Aligned_cols=74 Identities=11% Similarity=0.157 Sum_probs=50.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+|+|+|+ |.+|..++..|...+ .. +|.++|++ .++++..+.++... . .... ..+..+.++++
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g-~~-----~v~v~~r~----~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~ 82 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELG-AA-----KIVIVNRT----LEKAKALAERFGEL---G-IAIA-YLDLEELLAEA 82 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-CC-----EEEEEcCC----HHHHHHHHHHHhhc---c-ccee-ecchhhccccC
Confidence 579999998 999999999999876 22 89999998 44444333333211 0 0111 23445668999
Q ss_pred cEEEEeCCCC
Q psy9582 85 NIAILIGSFP 94 (329)
Q Consensus 85 DiVi~~~g~~ 94 (329)
|+||.+....
T Consensus 83 Dvvi~~~~~~ 92 (155)
T cd01065 83 DLIINTTPVG 92 (155)
T ss_pred CEEEeCcCCC
Confidence 9999986543
No 273
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.06 E-value=0.0027 Score=62.39 Aligned_cols=101 Identities=11% Similarity=0.139 Sum_probs=64.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC---cccccCC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN---PITAFKD 83 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~---~~~al~~ 83 (329)
+|+|||. |.||.++|..|+..|. +|.+||++ .++++........ . ..+....+ ..+.+++
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~-------~V~v~drt----~~~~~~l~~~~~~---g--~~~~~~~s~~e~v~~l~~ 63 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF-------TVSVYNRT----PEKTDEFLAEHAK---G--KKIVGAYSIEEFVQSLER 63 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC-------eEEEEeCC----HHHHHHHHhhccC---C--CCceecCCHHHHHhhcCC
Confidence 4899998 9999999999999997 89999998 5544432211000 0 01222222 2334567
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC--chhhH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN--PVNTN 139 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN--P~~~~ 139 (329)
+|+|+++... + +.+.++.+.+..+.+++.+||-.+| |.+..
T Consensus 64 ~dvIil~v~~----~-----------~~v~~Vi~~l~~~L~~g~iIID~gns~~~~t~ 106 (467)
T TIGR00873 64 PRKIMLMVKA----G-----------APVDAVINQLLPLLEKGDIIIDGGNSHYPDTE 106 (467)
T ss_pred CCEEEEECCC----c-----------HHHHHHHHHHHhhCCCCCEEEECCCcCHHHHH
Confidence 9998887311 1 3445555666666557778888886 55543
No 274
>KOG1201|consensus
Probab=97.06 E-value=0.0065 Score=55.38 Aligned_cols=116 Identities=12% Similarity=0.086 Sum_probs=72.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cCCc------cceEee-c
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FPLL------VDVSVH-E 75 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~~~------~~i~~~-~ 75 (329)
...|.|+||++.+|..+|.++++.+- .++|+|+|. +-.+..+..+++.. ..+. .++.-+ .
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~-------~~vl~Din~----~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~ 106 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGA-------KLVLWDINK----QGNEETVKEIRKIGEAKAYTCDISDREEIYRLAK 106 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCC-------eEEEEeccc----cchHHHHHHHHhcCceeEEEecCCCHHHHHHHHH
Confidence 35789999988999999999999987 899999993 33333344444321 0010 111111 1
Q ss_pred CcccccCCccEEEEeCCCC-CCCC--CCHH---HHHHHHH----HHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 76 NPITAFKDANIAILIGSFP-RKSN--MERS---ELLAINS----SIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~-~~~g--~~~~---~~~~~n~----~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
..++...+.|++|.-||.- -++. .+++ ..++.|+ ..++.+.+.|.+. .++-|+.++
T Consensus 107 ~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~--~~GHIV~Ia 172 (300)
T KOG1201|consen 107 KVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN--NNGHIVTIA 172 (300)
T ss_pred HHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc--CCceEEEeh
Confidence 3456678999999988863 3332 2322 2233343 4778888999985 455555543
No 275
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0023 Score=57.26 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCc---
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENP--- 77 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~--- 77 (329)
+.+++.|+||+|.+|.+++..|+..|. +|++.+++ .+.++....++.+..... ..++.-..+.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 76 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-------QVAIAARH----LDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSM 76 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 347899999999999999999999987 89999998 444444433343211000 0011000111
Q ss_pred ----ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEc
Q psy9582 78 ----ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVG 133 (329)
Q Consensus 78 ----~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~t 133 (329)
.+.+...|++|+.+|.... + ..+ ....+..|+.....+ .+.+.+.. ..+.+++++
T Consensus 77 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~~s 145 (253)
T PRK05867 77 LDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQG-QGGVIINTA 145 (253)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcC-CCcEEEEEC
Confidence 1223478999999886431 1 112 223345555544444 44444321 234565554
No 276
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.04 E-value=0.0027 Score=56.56 Aligned_cols=124 Identities=16% Similarity=0.190 Sum_probs=64.6
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEee--
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVH-- 74 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~-- 74 (329)
||+ +..+|.|+||+|++|++++..|++.+. ++++...+. .+.......++....... ..+++-.
T Consensus 1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 70 (252)
T PRK06077 1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGS-------LVVVNAKKR---AEEMNETLKMVKENGGEGIGVLADVSTREG 70 (252)
T ss_pred CCCCCCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC---hHHHHHHHHHHHHcCCeeEEEEeccCCHHH
Confidence 664 457999999999999999999999887 676655431 222222222222110000 0011100
Q ss_pred -----cCcccccCCccEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 75 -----ENPITAFKDANIAILIGSFPRKS---NMER---SELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 75 -----~~~~~al~~aDiVi~~~g~~~~~---g~~~---~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.+..+.+...|+||+++|..... +.+. ...+..|......+++.+.++..+.+.+|+++.
T Consensus 71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (252)
T PRK06077 71 CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS 141 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence 11112235679999998863211 1122 233455555545555554444323356666653
No 277
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.02 E-value=0.012 Score=53.91 Aligned_cols=67 Identities=15% Similarity=0.350 Sum_probs=43.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchh-hhHhhhhhcccCCccceEeecC-cccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIK-GVIMEIEDCIFPLLVDVSVHEN-PITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~-~~~~dl~~~~~~~~~~i~~~~~-~~~al~ 82 (329)
.++|+|+|. |-||..++..|...|. .+..++.+.. ...++ +..+++.+ +.+.+ ..++.+
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~-------~v~i~g~d~~--~~~~~~a~~lgv~d---------~~~~~~~~~~~~ 63 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL-------VVRIIGRDRS--AATLKAALELGVID---------ELTVAGLAEAAA 63 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC-------eEEEEeecCc--HHHHHHHhhcCccc---------ccccchhhhhcc
Confidence 468999998 9999999999999998 6677777621 11111 11112211 11122 257888
Q ss_pred CccEEEEe
Q psy9582 83 DANIAILI 90 (329)
Q Consensus 83 ~aDiVi~~ 90 (329)
+||+||++
T Consensus 64 ~aD~Viva 71 (279)
T COG0287 64 EADLVIVA 71 (279)
T ss_pred cCCEEEEe
Confidence 99999998
No 278
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.02 E-value=0.0031 Score=57.06 Aligned_cols=69 Identities=9% Similarity=0.147 Sum_probs=47.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||+|||+ |.+|++++..|...+... ..+.++|++ .++++. +.+.. ..+....+..+.++++|
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~----~~i~v~~r~----~~~~~~----l~~~~----~~~~~~~~~~~~~~~aD 63 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADV----SEIIVSPRN----AQIAAR----LAERF----PKVRIAKDNQAVVDRSD 63 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCh----heEEEECCC----HHHHHH----HHHHc----CCceEeCCHHHHHHhCC
Confidence 37999998 999999999999876411 157888887 444332 22110 12334456667788999
Q ss_pred EEEEeC
Q psy9582 86 IAILIG 91 (329)
Q Consensus 86 iVi~~~ 91 (329)
+||++.
T Consensus 64 vVilav 69 (258)
T PRK06476 64 VVFLAV 69 (258)
T ss_pred EEEEEe
Confidence 999983
No 279
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.013 Score=54.13 Aligned_cols=118 Identities=14% Similarity=0.039 Sum_probs=66.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc--cCC---ccceEeecCc--
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI--FPL---LVDVSVHENP-- 77 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~--~~~---~~~i~~~~~~-- 77 (329)
.++|.|+||+|++|.+++..|++.|. +|++++++ .++......++.... ... ..++.-..+.
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~-------~vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~ 84 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGA-------HVVLAVRN----LDKGKAAAARITAATPGADVTLQELDLTSLASVRA 84 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHH
Confidence 36899999999999999999999887 89999988 333332222332110 000 0011000011
Q ss_pred -----ccccCCccEEEEeCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 78 -----ITAFKDANIAILIGSFPRKSN----MERSELLAINSSI----FIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 78 -----~~al~~aDiVi~~~g~~~~~g----~~~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
.+.+...|++|+.+|....+. ......+..|... .+.+.+.+++. ..+.||++|-.
T Consensus 85 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS~ 153 (306)
T PRK06197 85 AADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV--PGSRVVTVSSG 153 (306)
T ss_pred HHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEECCH
Confidence 112346899999988532111 1222345555554 66666666654 34566666643
No 280
>PRK07069 short chain dehydrogenase; Validated
Probab=97.02 E-value=0.0031 Score=56.13 Aligned_cols=116 Identities=18% Similarity=0.194 Sum_probs=67.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-Cc--cceEeec--C-----
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LL--VDVSVHE--N----- 76 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~--~~i~~~~--~----- 76 (329)
||.|+||+|.+|.+++..|+..|. +|++.+++. .+.++....++...... .. ....++. +
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-------~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 70 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-------KVFLTDIND---AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALL 70 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc---chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHH
Confidence 589999999999999999999887 899999871 22233333233221100 00 0011111 1
Q ss_pred --cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 77 --PITAFKDANIAILIGSFPRKS---NME---RSELLAINSS----IFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 77 --~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+.+...|+||+.+|..... ..+ ....+..|+. .++.+.+.+++. +.+.|+++|.
T Consensus 71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~~ss 138 (251)
T PRK07069 71 AQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS--QPASIVNISS 138 (251)
T ss_pred HHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc--CCcEEEEecC
Confidence 112245679999998864321 112 2334556766 677777777764 3345666654
No 281
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.01 Score=53.81 Aligned_cols=119 Identities=14% Similarity=0.145 Sum_probs=66.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEeec--------
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVHE-------- 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~~-------- 75 (329)
+++.|+||+|.+|..++..|+..|. +|++++++ .+.++....++........ ....++.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-------~vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 69 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-------ELFLTDRD----ADGLAQTVADARALGGTVPEHRALDISDYDAVAAFA 69 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHH
Confidence 3699999999999999999999886 89999988 4444433333332110000 0111110
Q ss_pred -CcccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhc---CCCeEEEEEcCc
Q psy9582 76 -NPITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVA---SRDVKVLVVGNP 135 (329)
Q Consensus 76 -~~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~---~p~a~viv~tNP 135 (329)
...+.+...|+||+++|..... ..+ ....+..|+.....+++.+..+. +..+.|++++-.
T Consensus 70 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~ 139 (272)
T PRK07832 70 ADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA 139 (272)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccc
Confidence 1112345689999998864311 122 23345566665555554433211 234566666543
No 282
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.011 Score=53.29 Aligned_cols=121 Identities=11% Similarity=0.108 Sum_probs=67.9
Q ss_pred CCCC---CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-Cc--cceEee
Q psy9582 1 MLKK---PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-LL--VDVSVH 74 (329)
Q Consensus 1 ~~~~---~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~~--~~i~~~ 74 (329)
||+. .+.+.|+||+|.+|.+++..|+..|. +|++.+++ .++++....++...... .. ....++
T Consensus 1 m~~~~l~~k~~lItGas~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 69 (265)
T PRK07062 1 MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGA-------SVAICGRD----EERLASAEARLREKFPGARLLAARCDVL 69 (265)
T ss_pred CCccccCCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhhCCCceEEEEEecCC
Confidence 5543 36899999999999999999999887 89999998 44444333333321100 00 001111
Q ss_pred c--Cc-------ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHH----HHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 75 E--NP-------ITAFKDANIAILIGSFPRKS---NME---RSELLAIN----SSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 75 ~--~~-------~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n----~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
. +. .+.+...|++|..+|..... ..+ ....+..| ....+.+.+.+++. ..+.|++++-
T Consensus 70 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS 146 (265)
T PRK07062 70 DEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS--AAASIVCVNS 146 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc--CCcEEEEecc
Confidence 1 11 11234679999998864311 112 22233334 33455566666653 2456666543
No 283
>PLN02712 arogenate dehydrogenase
Probab=97.01 E-value=0.0074 Score=61.95 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc-C
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF-K 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al-~ 82 (329)
+++||+|||. |.+|..++..|...|. +|..+|++ .... .+.++ .+....+..+.+ +
T Consensus 51 ~~~kIgIIG~-G~mG~slA~~L~~~G~-------~V~~~dr~----~~~~--~A~~~---------Gv~~~~d~~e~~~~ 107 (667)
T PLN02712 51 TQLKIAIIGF-GNYGQFLAKTLISQGH-------TVLAHSRS----DHSL--AARSL---------GVSFFLDPHDLCER 107 (667)
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHHCCC-------EEEEEeCC----HHHH--HHHHc---------CCEEeCCHHHHhhc
Confidence 3579999998 9999999999998885 89999987 2211 11111 122334445534 5
Q ss_pred CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hhcCCCeEEEEEcC
Q psy9582 83 DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN-SVASRDVKVLVVGN 134 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~-~~~~p~a~viv~tN 134 (329)
+||+||++. |- ..+.++++.+. .+.+++++|+.++.
T Consensus 108 ~aDvViLav--P~--------------~~~~~vl~~l~~~~l~~g~iVvDv~S 144 (667)
T PLN02712 108 HPDVILLCT--SI--------------ISTENVLKSLPLQRLKRNTLFVDVLS 144 (667)
T ss_pred CCCEEEEcC--CH--------------HHHHHHHHhhhhhcCCCCeEEEECCC
Confidence 799999982 11 23444444443 33346788777763
No 284
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.01 E-value=0.0044 Score=57.11 Aligned_cols=110 Identities=12% Similarity=0.115 Sum_probs=66.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccc----ccCC
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT----AFKD 83 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~----al~~ 83 (329)
|.|+||+|++|++++..|...|.. +|.++|.... ...+. .+... .....+........ .+.+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~------~v~~~~~~~~--~~~~~----~~~~~--~~~~d~~~~~~~~~~~~~~~~~ 66 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT------DILVVDNLRD--GHKFL----NLADL--VIADYIDKEDFLDRLEKGAFGK 66 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc------eEEEEecCCC--chhhh----hhhhe--eeeccCcchhHHHHHHhhccCC
Confidence 579999999999999999988752 6888887621 11111 11100 00001111111111 2358
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.|+||++++.......+.......|+.....+++.+.+.. . .+|.+|.
T Consensus 67 ~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~--~~v~~SS 114 (314)
T TIGR02197 67 IEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I--PFIYASS 114 (314)
T ss_pred CCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C--cEEEEcc
Confidence 9999999886432223445567789999999999888763 3 3555553
No 285
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0084 Score=53.81 Aligned_cols=100 Identities=17% Similarity=0.065 Sum_probs=58.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+++.|+||+|.+|.+++..|+..|. +|++++++. .+.++ ...+ ........++.-..+..+.+...|
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~-------~Vi~~~r~~---~~~~~-~~~~--~~~~~~~~D~~~~~~~~~~~~~iD 81 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGA-------KVIGLTHSK---INNSE-SNDE--SPNEWIKWECGKEESLDKQLASLD 81 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEECCc---hhhhh-hhcc--CCCeEEEeeCCCHHHHHHhcCCCC
Confidence 6899999999999999999999987 899999872 11111 1000 000000011111112234567899
Q ss_pred EEEEeCCCCCCCCCC---HHHHHHHHHHHHHHHHHH
Q psy9582 86 IAILIGSFPRKSNME---RSELLAINSSIFIEQGKA 118 (329)
Q Consensus 86 iVi~~~g~~~~~g~~---~~~~~~~n~~~~~~i~~~ 118 (329)
++|+.+|.......+ ....+..|+.....+++.
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 117 (245)
T PRK12367 82 VLILNHGINPGGRQDPENINKALEINALSSWRLLEL 117 (245)
T ss_pred EEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence 999998864322222 334556677654444443
No 286
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.00 E-value=0.002 Score=57.84 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=58.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEe-ecCccccc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSV-HENPITAF- 81 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~-~~~~~~al- 81 (329)
++||.|+||+|++|+.++..|+..+. +|+++.++ .+++.....+ ...... ..++.- ..++.+++
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~~~ 83 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGF-------AVKAGVRD----VDKAKTSLPQ--DPSLQIVRADVTEGSDKLVEAIG 83 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-------EEEEEecC----HHHHHHhccc--CCceEEEEeeCCCCHHHHHHHhh
Confidence 47899999999999999999999886 88888776 3322211100 000000 011110 01234556
Q ss_pred CCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 82 KDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
.++|+||+++|.....+. ......|......+++.+.+.
T Consensus 84 ~~~d~vi~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~ 122 (251)
T PLN00141 84 DDSDAVICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKA 122 (251)
T ss_pred cCCCEEEECCCCCcCCCC--CCceeeehHHHHHHHHHHHHc
Confidence 689999998775322111 111223444556677777664
No 287
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=97.00 E-value=0.0026 Score=58.74 Aligned_cols=62 Identities=13% Similarity=0.219 Sum_probs=45.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||++||. |.+|++++..|++.|+ +|.++|++ .. .+ ++.... .....+..++.++||
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~-------~v~v~~~~----~~-~~----~~~~~g------~~~~~s~~~~~~~ad 57 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH-------QLHVTTIG----PV-AD----ELLSLG------AVSVETARQVTEASD 57 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC-------eEEEEeCC----Hh-HH----HHHHcC------CeecCCHHHHHhcCC
Confidence 37999998 9999999999999987 89999987 32 22 122111 222344567789999
Q ss_pred EEEEe
Q psy9582 86 IAILI 90 (329)
Q Consensus 86 iVi~~ 90 (329)
+||++
T Consensus 58 vVi~~ 62 (292)
T PRK15059 58 IIFIM 62 (292)
T ss_pred EEEEe
Confidence 99997
No 288
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0068 Score=54.09 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|++|.+++..|++.|. .|+++|++
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-------~Vi~~~r~ 41 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-------HVIVSSRK 41 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 46899999999999999999999886 89999998
No 289
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.98 E-value=0.00048 Score=61.73 Aligned_cols=121 Identities=14% Similarity=0.116 Sum_probs=73.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhC----CCCCCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCccceEeecCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANG----DLLGKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLLVDVSVHENPI 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~ 78 (329)
.||.+.|| |..|..++.+|+.. |+-. ++ --+++|+|.+- ....+.+......+.+.. .......++.
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~G~~~-~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~----~~~~~~~~L~ 99 (255)
T PF03949_consen 26 QRIVFFGA-GSAGIGIARLLVAAMVREGLSE-EEARKRIWLVDSKGLLTDDREDLNPHKKPFARKT----NPEKDWGSLL 99 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-H-HHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSS----STTT--SSHH
T ss_pred cEEEEeCC-ChhHHHHHHHHHHHHHHhcCCH-HHHhccEEEEeccceEeccCccCChhhhhhhccC----cccccccCHH
Confidence 69999999 99999999988876 7630 00 01799999871 001111222222222211 1111115788
Q ss_pred cccCCc--cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582 79 TAFKDA--NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA 147 (329)
Q Consensus 79 ~al~~a--DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~ 147 (329)
++++++ |++|=+.+.+. -..+++.+.|.+++ ++.+|.-.|||.. +..+-+++.+
T Consensus 100 eav~~~kPtvLIG~S~~~g--------------~ft~evv~~Ma~~~-erPIIF~LSNPt~~aE~~peda~~~t 158 (255)
T PF03949_consen 100 EAVKGAKPTVLIGLSGQGG--------------AFTEEVVRAMAKHN-ERPIIFPLSNPTPKAECTPEDAYEWT 158 (255)
T ss_dssp HHHHCH--SEEEECSSSTT--------------SS-HHHHHHCHHHS-SSEEEEE-SSSCGGSSS-HHHHHHTT
T ss_pred HHHHhcCCCEEEEecCCCC--------------cCCHHHHHHHhccC-CCCEEEECCCCCCcccCCHHHHHhhC
Confidence 999999 99887655433 35677888899997 8999999999975 4445555555
No 290
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.98 E-value=0.002 Score=55.64 Aligned_cols=74 Identities=14% Similarity=0.163 Sum_probs=50.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-----cCccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-----ENPIT 79 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-----~~~~~ 79 (329)
.+++.|+||+|.+|..++..|...+. +|++++++ .++++....++.+.. .. .+... .+..+
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~g~-------~V~l~~R~----~~~~~~l~~~l~~~~-~~--~~~~~~~~~~~~~~~ 93 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGA-------RVVLVGRD----LERAQKAADSLRARF-GE--GVGAVETSDDAARAA 93 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHHHHHHhhc-CC--cEEEeeCCCHHHHHH
Confidence 47999999889999999999998775 89999988 555554443343211 11 11111 22346
Q ss_pred ccCCccEEEEeCC
Q psy9582 80 AFKDANIAILIGS 92 (329)
Q Consensus 80 al~~aDiVi~~~g 92 (329)
+++++|+||.+..
T Consensus 94 ~~~~~diVi~at~ 106 (194)
T cd01078 94 AIKGADVVFAAGA 106 (194)
T ss_pred HHhcCCEEEECCC
Confidence 7899999888643
No 291
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0033 Score=55.92 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+++.|+||+|.+|++++..|++.|. +|.+++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~ 38 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-------RVVVADRD 38 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEecCC
Confidence 456899999999999999999999886 89999988
No 292
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.98 E-value=0.0028 Score=55.92 Aligned_cols=34 Identities=12% Similarity=0.284 Sum_probs=31.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..+|.|+||+|++|+.++..|++.|. +|++++++
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~-------~V~~~~r~ 38 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGA-------QVCINSRN 38 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 46899999999999999999999887 89999998
No 293
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.98 E-value=0.0044 Score=55.51 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCc----
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENP---- 77 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~---- 77 (329)
-+.+++.|+||+|.+|.+++..|++.|. +|++.+.+. ++.++ ++.+..... ..++.-..+.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~-------~v~~~~~~~---~~~~~----~l~~~~~~~~~~Dl~~~~~~~~~~ 70 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGA-------KVAVLYNSA---ENEAK----ELREKGVFTIKCDVGNRDQVKKSK 70 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCc---HHHHH----HHHhCCCeEEEecCCCHHHHHHHH
Confidence 3457899999999999999999999887 788877651 11111 111110000 0011000111
Q ss_pred ---ccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 78 ---ITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 78 ---~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.+.+...|+||+++|.... + ..+ ....+..|+.. .+.+.+.+.+. ..+.||+++-
T Consensus 71 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~g~iv~isS 138 (255)
T PRK06463 71 EVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS--KNGAIVNIAS 138 (255)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcC
Confidence 1223467999999886431 1 122 22344556554 56666666643 3456666654
No 294
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.97 E-value=0.0026 Score=59.62 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
...+++|||+ |.+|...+..+....-+. +|.++|++ .++++..+.++++. ...+....+..+++++
T Consensus 127 ~~~~lgiiG~-G~qA~~~l~al~~~~~~~-----~v~V~~r~----~~~~~~~~~~~~~~----g~~v~~~~~~~eav~~ 192 (325)
T TIGR02371 127 DSSVLGIIGA-GRQAWTQLEALSRVFDLE-----EVSVYCRT----PSTREKFALRASDY----EVPVRAATDPREAVEG 192 (325)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEECCC----HHHHHHHHHHHHhh----CCcEEEeCCHHHHhcc
Confidence 3579999998 999998777665533333 99999999 66666555555432 1235666788899999
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
||+|+.+.
T Consensus 193 aDiVitaT 200 (325)
T TIGR02371 193 CDILVTTT 200 (325)
T ss_pred CCEEEEec
Confidence 99999863
No 295
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0075 Score=54.08 Aligned_cols=161 Identities=14% Similarity=0.079 Sum_probs=79.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCccc--
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPIT-- 79 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~-- 79 (329)
.+++.|+||+|.+|.+++..|+..|. ++++++.+.....+.++....++....... ..++.-..+..+
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~-------~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 80 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGA-------KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF 80 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC-------cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence 47899999999999999999998887 767776542111222222222222111000 001111111111
Q ss_pred -----ccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhHHHHHHHHC
Q psy9582 80 -----AFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTNTYITMKSA 147 (329)
Q Consensus 80 -----al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~~~~~~~~~ 147 (329)
.+...|++|+.+|.... + ..+ ....+..|+.....+.+.+.+...+.+.++++ +--... ..
T Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------~~ 153 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------FT 153 (257)
T ss_pred HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-------cC
Confidence 13467999999886321 1 112 33445567665555555554433233333333 222111 01
Q ss_pred CCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeEE
Q psy9582 148 PDLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKV 184 (329)
Q Consensus 148 ~~~~~~~i~~~t~lds~r~~~~la~~l~~~~~~v~~~ 184 (329)
++. ...+.+-.....+...+++.++ +..|+..
T Consensus 154 ~~~---~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~ 185 (257)
T PRK12744 154 PFY---SAYAGSKAPVEHFTRAASKEFG--ARGISVT 185 (257)
T ss_pred CCc---ccchhhHHHHHHHHHHHHHHhC--cCceEEE
Confidence 111 1223333333456677777776 4456544
No 296
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0037 Score=56.00 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..+|.|+||+|++|.+++..|++.|. +|+++|++
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~-------~v~~~~r~ 40 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGA-------TVVVGDID 40 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence 46899999999999999999999887 89999998
No 297
>PRK12742 oxidoreductase; Provisional
Probab=96.96 E-value=0.0051 Score=54.25 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|..++..|+..|. ++++.+.+
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~-------~v~~~~~~ 39 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGA-------NVRFTYAG 39 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCC
Confidence 46899999999999999999999887 78887654
No 298
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.96 E-value=0.0045 Score=55.64 Aligned_cols=78 Identities=9% Similarity=0.155 Sum_probs=48.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC--CccceEeecCc------
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP--LLVDVSVHENP------ 77 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~--~~~~i~~~~~~------ 77 (329)
|++.|+||+|.+|.+++..|++.|. +|.+.+++ .+.++....++.+.... +..+++-..+.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~ 69 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA-------RVVISSRN----EENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKE 69 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHH
Confidence 4799999999999999999999987 89999998 44444333334321100 00011100111
Q ss_pred -ccccCCccEEEEeCCCC
Q psy9582 78 -ITAFKDANIAILIGSFP 94 (329)
Q Consensus 78 -~~al~~aDiVi~~~g~~ 94 (329)
.+.+..-|++|..+|..
T Consensus 70 ~~~~~g~id~li~naG~~ 87 (259)
T PRK08340 70 AWELLGGIDALVWNAGNV 87 (259)
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 12235689999998863
No 299
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.96 E-value=0.0036 Score=56.13 Aligned_cols=34 Identities=29% Similarity=0.368 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|++|.+++..|++.|. +|+++|++
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~-------~v~~~~r~ 41 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA-------RVVLVDRS 41 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCc
Confidence 36899999999999999999999987 89999987
No 300
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0046 Score=55.53 Aligned_cols=118 Identities=19% Similarity=0.175 Sum_probs=64.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCccc---
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPIT--- 79 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~~--- 79 (329)
++|.|+||+|++|..++..|+..|. +|+++|++ .+..+....++........ .....+ .+..+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 70 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-------QLVLAARN----ETRLASLAQELADHGGEALVVPTDVSDAEACERLIE 70 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 4799999999999999999998886 89999988 3333333333332110000 000010 01111
Q ss_pred ----ccCCccEEEEeCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q psy9582 80 ----AFKDANIAILIGSFPRKSN---M-ER---SELLAINSSIFIEQGKALNSVA-SRDVKVLVVGN 134 (329)
Q Consensus 80 ----al~~aDiVi~~~g~~~~~g---~-~~---~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tN 134 (329)
.+.+.|+||+++|...... . +. ...+..|+.....+.+.+.++. +..+.+++++-
T Consensus 71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS 137 (263)
T PRK06181 71 AAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSS 137 (263)
T ss_pred HHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 1236799999987643211 1 21 2335666666666555554321 12345555554
No 301
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0033 Score=57.80 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=68.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCccc---
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPIT--- 79 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~--- 79 (329)
+++.|+||+|.+|++++..|++.|. +|++++++. ...++.....++...... .....++ .+..+
T Consensus 47 k~iLItGasggIG~~la~~l~~~G~-------~V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 116 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEGA-------DIAIVYLDE---HEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVE 116 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCc---chHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 6899999999999999999999887 899999872 111222222222111000 0001111 11111
Q ss_pred ----ccCCccEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 80 ----AFKDANIAILIGSFPRK--S--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 80 ----al~~aDiVi~~~g~~~~--~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
.+...|+||+.+|.... + ..+ ....+..|+.....+.+.+.++-.+.+.+|++|.
T Consensus 117 ~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred HHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 12357999998876321 1 122 2345677877777777777664324456666654
No 302
>PRK08264 short chain dehydrogenase; Validated
Probab=96.94 E-value=0.0036 Score=55.29 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=66.0
Q ss_pred CCC-CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecC---
Q psy9582 1 MLK-KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHEN--- 76 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~--- 76 (329)
||+ +.++|.|+||+|.+|++++..|++.|.- +|.+++++ .+++.. ..........++.-..+
T Consensus 1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~------~V~~~~r~----~~~~~~----~~~~~~~~~~D~~~~~~~~~ 66 (238)
T PRK08264 1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAA------KVYAAARD----PESVTD----LGPRVVPLQLDVTDPASVAA 66 (238)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCcc------cEEEEecC----hhhhhh----cCCceEEEEecCCCHHHHHH
Confidence 564 4578999999999999999999988752 68999987 332221 00000000001100111
Q ss_pred cccccCCccEEEEeCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCch
Q psy9582 77 PITAFKDANIAILIGSFPRKS----NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNPV 136 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~~~----g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP~ 136 (329)
..+.+...|+||+++|.+... ..+ ....+..|......+.+.+.+.. ...+.++++|...
T Consensus 67 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~ 135 (238)
T PRK08264 67 AAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVL 135 (238)
T ss_pred HHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChh
Confidence 112234579999998873211 112 22334556665555555543321 1345666666543
No 303
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.94 E-value=0.0029 Score=58.20 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=44.7
Q ss_pred EEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCccEEEE
Q psy9582 10 ITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDANIAIL 89 (329)
Q Consensus 10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aDiVi~ 89 (329)
+||. |.+|.+++..|+..|. +|.+||++ .++.+. +... ....+.+..++++++|+||+
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~-------~V~v~dr~----~~~~~~----l~~~------g~~~~~s~~~~~~~advVil 58 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH-------PVRVFDLF----PDAVEE----AVAA------GAQAAASPAEAAEGADRVIT 58 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC-------eEEEEeCC----HHHHHH----HHHc------CCeecCCHHHHHhcCCEEEE
Confidence 5798 9999999999999887 89999998 444332 2221 12344566788999999999
Q ss_pred eC
Q psy9582 90 IG 91 (329)
Q Consensus 90 ~~ 91 (329)
+.
T Consensus 59 ~v 60 (288)
T TIGR01692 59 ML 60 (288)
T ss_pred eC
Confidence 83
No 304
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.93 E-value=0.0057 Score=54.43 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=30.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|+.++..|+..|. +|++++++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-------~v~~~~r~ 34 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-------NVVVNDLG 34 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 4799999999999999999999887 89999998
No 305
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0023 Score=56.67 Aligned_cols=117 Identities=16% Similarity=0.152 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc---c
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA---F 81 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a---l 81 (329)
.+++.|+||+|.+|.+++..|+..|. +|++++++ .++++....... .. ....+++-..+..+. .
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~-~~-~~~~D~~~~~~v~~~~~~~ 75 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGA-------RVVAAARN----AAALDRLAGETG-CE-PLRLDVGDDAAIRAALAAA 75 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhC-Ce-EEEecCCCHHHHHHHHHHh
Confidence 46899999999999999999999887 89999998 333332211111 00 000011101111122 2
Q ss_pred CCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhcC---CCeEEEEEcC
Q psy9582 82 KDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNSVAS---RDVKVLVVGN 134 (329)
Q Consensus 82 ~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~~~~---p~a~viv~tN 134 (329)
...|+||+.+|..... ..+ ....+..|+.....+.+.+.+... ..+.|+++|-
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 3579999988764311 112 223445666666556555544321 1246666653
No 306
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.02 Score=51.36 Aligned_cols=118 Identities=12% Similarity=0.041 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccC-C-ccceEeec--C---
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP-L-LVDVSVHE--N--- 76 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~-~-~~~i~~~~--~--- 76 (329)
+.+++.|+|++|.+|.+++..|+..|. +|.+.+++ .++++....++...... . .....++. +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 74 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-------HLHLVARD----ADALEALAADLRAAHGVDVAVHALDLSSPEAREQ 74 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHH
Confidence 357899999999999999999999887 89999998 44444333333321100 0 00111110 1
Q ss_pred cccccCCccEEEEeCCCCC-CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 77 PITAFKDANIAILIGSFPR-KS--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~-~~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~tN 134 (329)
..+.+...|++|+++|... .+ ..+ ....+..|+.. .+.+.+.+.+. ..+.+++++.
T Consensus 75 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~iss 140 (259)
T PRK06125 75 LAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR--GSGVIVNVIG 140 (259)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEecC
Confidence 1123457899999888642 11 112 23344555553 44444555543 2356666653
No 307
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.92 E-value=0.0037 Score=58.73 Aligned_cols=73 Identities=12% Similarity=0.166 Sum_probs=53.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..+|+|+|+ |..|...+..+.. .+ +. +|.+++++ .++++..+.++++.. + ..+....+..+++.+
T Consensus 132 ~~~v~IiGa-G~~a~~~~~al~~~~~-~~-----~V~v~~R~----~~~a~~l~~~~~~~~-g--~~v~~~~d~~~al~~ 197 (330)
T PRK08291 132 ASRAAVIGA-GEQARLQLEALTLVRP-IR-----EVRVWARD----AAKAEAYAADLRAEL-G--IPVTVARDVHEAVAG 197 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CC-----EEEEEcCC----HHHHHHHHHHHhhcc-C--ceEEEeCCHHHHHcc
Confidence 479999998 9999988887775 34 33 89999999 666666655554321 1 234556777889999
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
||+|+.+.
T Consensus 198 aDiVi~aT 205 (330)
T PRK08291 198 ADIIVTTT 205 (330)
T ss_pred CCEEEEee
Confidence 99998874
No 308
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.91 E-value=0.007 Score=53.55 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=29.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~ 45 (329)
++|.|+||+|.+|..++..|++.|. ++++. +++
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g~-------~v~~~~~r~ 39 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEGA-------KVVIAYDIN 39 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCC
Confidence 5899999999999999999998886 78887 887
No 309
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.90 E-value=0.0043 Score=55.86 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=32.7
Q ss_pred CCCC--CCEEEEEcC--CCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKK--PVRISITGA--AGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~--~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||++ .+.+.|+|| ++.+|..++..|+..|. .|++.|++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~-------~v~l~~r~ 42 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGA-------EVVLTGFG 42 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCC-------EEEEecCc
Confidence 6753 468999998 78999999999999887 89999876
No 310
>PRK09242 tropinone reductase; Provisional
Probab=96.90 E-value=0.015 Score=52.05 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=66.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c----cceEeec----
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L----VDVSVHE---- 75 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~----~~i~~~~---- 75 (329)
.+++.|+||+|.+|..++..|++.|. +|++.+++ .+.++....++....... . .++.-..
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~-------~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~ 77 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGA-------DVLIVARD----ADALAQARDELAEEFPEREVHGLAADVSDDEDRRA 77 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH
Confidence 46899999999999999999999887 89999998 444444444443221000 0 0110000
Q ss_pred ---CcccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q psy9582 76 ---NPITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 76 ---~~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~tN 134 (329)
...+.+...|+||+++|.... + ..+ ....+..|+.-...+ .+.+++. +.+.++++|-
T Consensus 78 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~~sS 147 (257)
T PRK09242 78 ILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH--ASSAIVNIGS 147 (257)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCceEEEECc
Confidence 112234567999999886321 1 112 223345565544444 4444443 3345555543
No 311
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.88 E-value=0.0076 Score=53.73 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=29.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
++.|+||+|.+|.+++..|++.|. +|++++.+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~ 33 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-------AVAVADLN 33 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 689999999999999999999887 89999987
No 312
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.88 E-value=0.016 Score=51.37 Aligned_cols=38 Identities=29% Similarity=0.281 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
|+.+..++.|+|++|.+|..++..|++.|. +|+++|++
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~-------~vi~~~r~ 38 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGA-------KLALIDLN 38 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 444567899999999999999999999886 89999998
No 313
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0061 Score=54.55 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=30.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|..++..|++.|. +|.+++++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~-------~v~~~~r~ 35 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD-------RVLALDID 35 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 3799999999999999999998886 89999988
No 314
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.87 E-value=0.0029 Score=59.50 Aligned_cols=62 Identities=18% Similarity=0.191 Sum_probs=44.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
.++|+|||. |.+|+.+|..|+. .|. +|+.+|.+ .... ... .+....++.+++++
T Consensus 146 g~~VgIIG~-G~IG~~vA~~L~~~~g~-------~V~~~d~~----~~~~------~~~-------~~~~~~~l~ell~~ 200 (332)
T PRK08605 146 DLKVAVIGT-GRIGLAVAKIFAKGYGS-------DVVAYDPF----PNAK------AAT-------YVDYKDTIEEAVEG 200 (332)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCC-------EEEEECCC----ccHh------HHh-------hccccCCHHHHHHh
Confidence 479999999 9999999999953 344 89999987 2211 011 01223467788999
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
||+|+++.
T Consensus 201 aDvIvl~l 208 (332)
T PRK08605 201 ADIVTLHM 208 (332)
T ss_pred CCEEEEeC
Confidence 99999974
No 315
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.017 Score=51.86 Aligned_cols=118 Identities=14% Similarity=0.226 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccc-hhhhHhhhhhccc-CC-ccceEee--cC
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKA-IKGVIMEIEDCIF-PL-LVDVSVH--EN 76 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~-~~~~~~dl~~~~~-~~-~~~i~~~--~~ 76 (329)
.++++|.|+||+|++|.+++..|++.+ . .|.+++++ .+. ++....++..... .. .....++ .+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~-------~V~~~~r~----~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~ 74 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPA-------RVVLAALP----DDPRRDAAVAQMKAAGASSVEVIDFDALDTDS 74 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCC-------eEEEEeCC----cchhHHHHHHHHHhcCCCceEEEEecCCChHH
Confidence 456789999999999999999999874 5 79999998 333 4433334432110 00 0011111 11
Q ss_pred c----cccc--CCccEEEEeCCCCCCCCC---CH---HHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEc
Q psy9582 77 P----ITAF--KDANIAILIGSFPRKSNM---ER---SELLAINSSI----FIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 77 ~----~~al--~~aDiVi~~~g~~~~~g~---~~---~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~t 133 (329)
. .+.. .+.|++|..+|....... +. .+.+..|+.. .+.+.+.+.+.. .+.|+++|
T Consensus 75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~is 145 (253)
T PRK07904 75 HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMS 145 (253)
T ss_pred HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEe
Confidence 1 1111 378999988776432111 11 1235666543 345666666642 34555554
No 316
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.86 E-value=0.003 Score=56.67 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|..++..|++.|. +|.+++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~ 48 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGA-------DIIITTHG 48 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 47899999999999999999999887 89999887
No 317
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.016 Score=51.90 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~ 45 (329)
.++|.|+||+|.+|..++..|+..|. + |.+++++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~-------~~V~~~~r~ 40 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGA-------AGLVICGRN 40 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-------CeEEEEcCC
Confidence 47899999999999999999998886 5 9999987
No 318
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.85 E-value=0.004 Score=58.58 Aligned_cols=92 Identities=12% Similarity=0.129 Sum_probs=59.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||. |.||+.+|..|...|. +|..||+. ..... +. .. . +.. .++.+.+++|
T Consensus 150 gktvgIiG~-G~IG~~vA~~l~~~G~-------~V~~~d~~----~~~~~----~~-~~--~----~~~-~~l~ell~~a 205 (333)
T PRK13243 150 GKTIGIIGF-GRIGQAVARRAKGFGM-------RILYYSRT----RKPEA----EK-EL--G----AEY-RPLEELLRES 205 (333)
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCC----CChhh----HH-Hc--C----CEe-cCHHHHHhhC
Confidence 479999999 9999999999998887 89999987 22111 11 11 0 111 3567889999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+|+++..... .+..++- .+.+... +|++++|+++-
T Consensus 206 DiV~l~lP~t~-----------~T~~~i~--~~~~~~m-k~ga~lIN~aR 241 (333)
T PRK13243 206 DFVSLHVPLTK-----------ETYHMIN--EERLKLM-KPTAILVNTAR 241 (333)
T ss_pred CEEEEeCCCCh-----------HHhhccC--HHHHhcC-CCCeEEEECcC
Confidence 99999743211 0111111 1233443 58899999973
No 319
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0077 Score=55.45 Aligned_cols=118 Identities=18% Similarity=0.217 Sum_probs=66.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEeec--C-----
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVHE--N----- 76 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~~--~----- 76 (329)
.+++.|+||+|.+|..++..|+..|. +|.+.+++ .+.++....++.... ... ....++. +
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~l~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~ 76 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA-------KLALVDLE----EAELAALAAELGGDD-RVLTVVADVTDLAAMQAAA 76 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhcCCC-cEEEEEecCCCHHHHHHHH
Confidence 36899999999999999999999987 89999998 444544333332110 000 0011111 1
Q ss_pred --cccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q psy9582 77 --PITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIFIEQGKALNSVA-SRDVKVLVVGN 134 (329)
Q Consensus 77 --~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~-~p~a~viv~tN 134 (329)
..+.+...|+||+.+|.... + ..+ ....+..|+.....+++.+.++. ...+.|++++.
T Consensus 77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 11223567999999886431 1 112 22345566665555554443321 12345666653
No 320
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.04 Score=48.91 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=58.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-c--cceEeec--C----
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-L--VDVSVHE--N---- 76 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~--~~i~~~~--~---- 76 (329)
+++.|+||+|++|.+++..|++.|. +|.+.+++ .+++.....++....... . ....++. +
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR-------DLALCARR----TDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEV 71 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEeCC----HHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHH
Confidence 4799999999999999999999886 89999998 444443333333211000 0 0111111 1
Q ss_pred ---cccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH
Q psy9582 77 ---PITAFKDANIAILIGSFPRKSN---ME---RSELLAINSSIFIEQGKAL 119 (329)
Q Consensus 77 ---~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~~~~~~i~~~i 119 (329)
..+.+...|+||+.+|...... .+ ....+..|+.....+.+.+
T Consensus 72 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 123 (248)
T PRK08251 72 FAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAA 123 (248)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 1223457899999988643221 11 1234456665544444443
No 321
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0048 Score=55.12 Aligned_cols=35 Identities=29% Similarity=0.241 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+++.|+||+|.+|.+++..|++.|. +|.+.+++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-------~Vi~~~r~ 48 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-------RVALLDRS 48 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 347899999999999999999999887 89999987
No 322
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=96.83 E-value=0.0088 Score=55.76 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=44.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.+||+|||+ |++|.+++..|...|. ++.+++... .+.... +... .+... +..+++++|
T Consensus 3 ~kkIgiIG~-G~mG~AiA~~L~~sG~-------~Viv~~~~~---~~~~~~----a~~~------Gv~~~-s~~ea~~~A 60 (314)
T TIGR00465 3 GKTVAIIGY-GSQGHAQALNLRDSGL-------NVIVGLRKG---GASWKK----ATED------GFKVG-TVEEAIPQA 60 (314)
T ss_pred cCEEEEEeE-cHHHHHHHHHHHHCCC-------eEEEEECcC---hhhHHH----HHHC------CCEEC-CHHHHHhcC
Confidence 478999998 9999999999999886 676665541 122211 1111 12222 356788999
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|+|+++.
T Consensus 61 DiVvLaV 67 (314)
T TIGR00465 61 DLIMNLL 67 (314)
T ss_pred CEEEEeC
Confidence 9999983
No 323
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0062 Score=54.54 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+.+.|+||+|.+|.+++..|++.|. +|++.|++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-------~v~~~~r~ 41 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-------DVALFDLR 41 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 347899999999999999999999987 89999987
No 324
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.81 E-value=0.0015 Score=58.58 Aligned_cols=122 Identities=11% Similarity=0.094 Sum_probs=76.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCC---CCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCccceEeecCccc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLL---GKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLLVDVSVHENPIT 79 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~---~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~ 79 (329)
.||.+.|| |..|..++.+|...+.- +.++ --+++++|..- ......+......+.+ +...-....++.+
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~----~~~~~~~~~~L~e 100 (254)
T cd00762 26 HKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLAR----FANPERESGDLED 100 (254)
T ss_pred cEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHH----HcCcccccCCHHH
Confidence 69999999 99999999888765431 1111 12799999861 0001111111111111 1111112357889
Q ss_pred ccC--CccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582 80 AFK--DANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA 147 (329)
Q Consensus 80 al~--~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~ 147 (329)
+++ ++|++|=+.+.+. -+.+++.+.|.+++ ++.+|+-.|||.. +...-+++.+
T Consensus 101 av~~~kptvlIG~S~~~g--------------~ft~evv~~Ma~~~-~~PIIFaLSNPt~~aE~tpe~a~~~t 158 (254)
T cd00762 101 AVEAAKPDFLIGVSRVGG--------------AFTPEVIRAXAEIN-ERPVIFALSNPTSKAECTAEEAYTAT 158 (254)
T ss_pred HHHhhCCCEEEEeCCCCC--------------CCCHHHHHHHhhcC-CCCEEEECCCcCCccccCHHHHHhhc
Confidence 999 9999886654432 25567788888887 8899999999974 5666666665
No 325
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.80 E-value=0.0053 Score=52.37 Aligned_cols=93 Identities=17% Similarity=0.170 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|. |.+|+.+|..+..-|. +|..+|+. ..... ...+. .+. ..++.+.++.|
T Consensus 36 g~tvgIiG~-G~IG~~vA~~l~~fG~-------~V~~~d~~----~~~~~----~~~~~------~~~-~~~l~ell~~a 92 (178)
T PF02826_consen 36 GKTVGIIGY-GRIGRAVARRLKAFGM-------RVIGYDRS----PKPEE----GADEF------GVE-YVSLDELLAQA 92 (178)
T ss_dssp TSEEEEEST-SHHHHHHHHHHHHTT--------EEEEEESS----CHHHH----HHHHT------TEE-ESSHHHHHHH-
T ss_pred CCEEEEEEE-cCCcCeEeeeeecCCc-------eeEEeccc----CChhh----hcccc------cce-eeehhhhcchh
Confidence 479999999 9999999999998887 99999998 22111 11111 122 23677889999
Q ss_pred cEEEEeCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 85 NIAILIGS-FPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 85 DiVi~~~g-~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
|+|+++.. .+...++= | .+.++.. ++++++||++--
T Consensus 93 Div~~~~plt~~T~~li-------~-------~~~l~~m-k~ga~lvN~aRG 129 (178)
T PF02826_consen 93 DIVSLHLPLTPETRGLI-------N-------AEFLAKM-KPGAVLVNVARG 129 (178)
T ss_dssp SEEEE-SSSSTTTTTSB-------S-------HHHHHTS-TTTEEEEESSSG
T ss_pred hhhhhhhccccccceee-------e-------eeeeecc-ccceEEEeccch
Confidence 99999743 23222210 1 1334443 588999999854
No 326
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.79 E-value=0.0084 Score=53.66 Aligned_cols=119 Identities=14% Similarity=0.130 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--C-----
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--N----- 76 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~----- 76 (329)
.++|.|+||+|.+|.+++..|+..|. ++++.+++ .+.++....++.+..... .....++. +
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~-------~vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~ 79 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALA 79 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 47999999999999999999999887 89999987 444433333333211000 00111111 1
Q ss_pred --cccccCCccEEEEeCCCCCC--CCCCHH---HHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582 77 --PITAFKDANIAILIGSFPRK--SNMERS---ELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN 134 (329)
Q Consensus 77 --~~~al~~aDiVi~~~g~~~~--~g~~~~---~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN 134 (329)
..+.+...|++|+++|.... ...+.. ..+..|+.....+.+.+..+. ...+.+|+++-
T Consensus 80 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 80 DFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 11223457999998875321 122222 235667666555555544321 12345555543
No 327
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=96.79 E-value=0.013 Score=60.98 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=61.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
.||+|||+ |.+|.+++..|...|... +|..+|++ .++++. +.+. ... ....++..++++++|
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~-----~V~~~d~~----~~~~~~-a~~~-----g~~--~~~~~~~~~~~~~aD 65 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAR-----EVVAVDRR----AKSLEL-AVSL-----GVI--DRGEEDLAEAVSGAD 65 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCC-----EEEEEECC----hhHHHH-HHHC-----CCC--CcccCCHHHHhcCCC
Confidence 68999998 999999999999887422 79999998 443331 1111 110 112345567789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+||++... ..+.++.+.+.++.+++.+|+.++
T Consensus 66 vVilavp~----------------~~~~~vl~~l~~~~~~~~ii~d~~ 97 (735)
T PRK14806 66 VIVLAVPV----------------LAMEKVLADLKPLLSEHAIVTDVG 97 (735)
T ss_pred EEEECCCH----------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence 99997321 235566666666655666665554
No 328
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.032 Score=49.34 Aligned_cols=46 Identities=30% Similarity=0.255 Sum_probs=36.9
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhH
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI 57 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~ 57 (329)
|..+.+.+.|+||++.+|.+++..|++.|. +|.+.+++ .++++...
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~-------~V~~~~r~----~~~l~~~~ 46 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGA-------TLILCDQD----QSALKDTY 46 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCC----HHHHHHHH
Confidence 333457899999999999999999999987 89999998 44454333
No 329
>PRK07985 oxidoreductase; Provisional
Probab=96.78 E-value=0.011 Score=54.31 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=65.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec---------
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--------- 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--------- 75 (329)
+++.|+||+|.+|.+++..|++.|. +|.+.+++.. .+.++.....+....... .....++.
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~-------~Vi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 120 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA-------DVAISYLPVE--EEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVH 120 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-------EEEEecCCcc--hhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHH
Confidence 6899999999999999999999987 8988876521 122221111111110000 00001110
Q ss_pred CcccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 76 NPITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
...+.+...|++|+.+|... .+ ..+ ....+..|+.....+.+.+.++...++.||++|-
T Consensus 121 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS 186 (294)
T PRK07985 121 EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSS 186 (294)
T ss_pred HHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECC
Confidence 11123456799999887532 11 122 2344567776665666555544323456777664
No 330
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.78 E-value=0.0083 Score=53.29 Aligned_cols=120 Identities=17% Similarity=0.204 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA- 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a- 80 (329)
.+++.|+||+|.+|++++..|++.|. ++.+.+.+. .+.++....++.+..... ..++.-.....++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 75 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGA-------KVVINYNSS---KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLV 75 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEcCCc---HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 47899999999999999999999886 777655431 223333333333211000 0011111111112
Q ss_pred ------cCCccEEEEeCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582 81 ------FKDANIAILIGSFPRKSN------MERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN 134 (329)
Q Consensus 81 ------l~~aDiVi~~~g~~~~~g------~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN 134 (329)
+...|+||+++|...... ....+.+..|+.....+.+.+.++. ...+.+++++-
T Consensus 76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 76 EEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 234799999988643211 1233455667666666555554431 12345666554
No 331
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0064 Score=54.61 Aligned_cols=34 Identities=35% Similarity=0.245 Sum_probs=31.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|+.++..|+..|. +|++++++
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~-------~Vv~~~r~ 39 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGA-------NLILLDIS 39 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCC
Confidence 47899999999999999999999887 89999987
No 332
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.012 Score=52.30 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~ 45 (329)
.+++.|+||+|++|..++..|++.|. +|++. +++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~-------~v~~~~~r~ 38 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGY-------DIAVNYARS 38 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC
Confidence 36899999999999999999999886 67664 555
No 333
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.77 E-value=0.0053 Score=56.91 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
...+++|+|+ |..|...+..+..-.-+. +|++||++ .++.+..+.++.+. +...+....+..+++.+
T Consensus 116 da~~l~iiGa-G~QA~~~~~a~~~v~~i~-----~v~v~~r~----~~~a~~f~~~~~~~---~~~~v~~~~~~~eav~~ 182 (301)
T PRK06407 116 NVENFTIIGS-GFQAETQLEGMASVYNPK-----RIRVYSRN----FDHARAFAERFSKE---FGVDIRPVDNAEAALRD 182 (301)
T ss_pred CCcEEEEECC-cHHHHHHHHHHHhcCCCC-----EEEEECCC----HHHHHHHHHHHHHh---cCCcEEEeCCHHHHHhc
Confidence 3578999998 999988777777643334 99999999 66677666666542 11246666788999999
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
||+|+.+.
T Consensus 183 aDIV~taT 190 (301)
T PRK06407 183 ADTITSIT 190 (301)
T ss_pred CCEEEEec
Confidence 99999753
No 334
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.77 E-value=0.0044 Score=54.74 Aligned_cols=34 Identities=26% Similarity=0.236 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|+.++..|++.|. ++.+...+
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~-------~v~~~~~~ 39 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA-------DVVVHYRS 39 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC
Confidence 36899999999999999999999887 67665554
No 335
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=96.76 E-value=0.012 Score=55.52 Aligned_cols=101 Identities=20% Similarity=0.236 Sum_probs=62.9
Q ss_pred CEEEEEcCCCc--------------------hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhh-hhhcc
Q psy9582 6 VRISITGAAGQ--------------------IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIME-IEDCI 64 (329)
Q Consensus 6 ~kI~IiGa~G~--------------------vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~d-l~~~~ 64 (329)
+||+|-|| |+ -|..+|..|+..|. +|+++|++ .+.++....+ +..
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gG~~MA~~La~aG~-------~V~v~Dr~----~~~l~~~~~~~l~~-- 66 (342)
T PRK12557 1 MKVSVYGA-GNQKLYLEQLNLPEKFGGEPPYGGSRMAIEFAEAGH-------DVVLAEPN----RSILSEELWKKVED-- 66 (342)
T ss_pred CeeEEEcC-cchhHHHHHhCCHHhcCCCCCcCHHHHHHHHHhCCC-------eEEEEECC----HHHhhHHHHHHHHH--
Confidence 57888888 75 37789999998887 89999998 3322211111 211
Q ss_pred cCCccceEeecCcccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhH
Q psy9582 65 FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTN 139 (329)
Q Consensus 65 ~~~~~~i~~~~~~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~ 139 (329)
..++.+++..+++++||+||++. |. + ..++++++.+.....++.+|+..+ -+...+
T Consensus 67 ----~Gi~~asd~~eaa~~ADvVIlaV--P~--~-----------~~v~~Vl~~L~~~L~~g~IVId~ST~~~~~~ 123 (342)
T PRK12557 67 ----AGVKVVSDDAEAAKHGEIHILFT--PF--G-----------KKTVEIAKNILPHLPENAVICNTCTVSPVVL 123 (342)
T ss_pred ----CCCEEeCCHHHHHhCCCEEEEEC--CC--c-----------HHHHHHHHHHHhhCCCCCEEEEecCCCHHHH
Confidence 12455567778899999999982 22 1 134445555665554666766665 344443
No 336
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.74 E-value=0.0043 Score=55.18 Aligned_cols=34 Identities=21% Similarity=0.126 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|.+++..|++.|. +|++++++
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~-------~vi~~~r~ 38 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGA-------DIVGAGRS 38 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCc
Confidence 47899999999999999999999987 89999987
No 337
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.74 E-value=0.0058 Score=57.02 Aligned_cols=73 Identities=14% Similarity=0.201 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
...+|+|||+ |.+|...+..+.. .+. . +|+++|++ .++.+..+.++.+. . ..+....+..++++
T Consensus 124 ~~~~v~iiG~-G~~a~~~~~al~~~~~~-~-----~V~V~~Rs----~~~a~~~a~~~~~~--g--~~~~~~~~~~~av~ 188 (314)
T PRK06141 124 DASRLLVVGT-GRLASLLALAHASVRPI-K-----QVRVWGRD----PAKAEALAAELRAQ--G--FDAEVVTDLEAAVR 188 (314)
T ss_pred CCceEEEECC-cHHHHHHHHHHHhcCCC-C-----EEEEEcCC----HHHHHHHHHHHHhc--C--CceEEeCCHHHHHh
Confidence 3579999998 9999999876664 443 2 89999998 66666665555432 1 13555567778999
Q ss_pred CccEEEEeC
Q psy9582 83 DANIAILIG 91 (329)
Q Consensus 83 ~aDiVi~~~ 91 (329)
+||+|+.+.
T Consensus 189 ~aDIVi~aT 197 (314)
T PRK06141 189 QADIISCAT 197 (314)
T ss_pred cCCEEEEee
Confidence 999997653
No 338
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.025 Score=50.02 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|++|.+++..|+..|. +|++++++
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~-------~V~~~~r~ 39 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA-------TVILVARH 39 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCC
Confidence 36899999999999999999999887 89999998
No 339
>PLN02712 arogenate dehydrogenase
Probab=96.72 E-value=0.021 Score=58.73 Aligned_cols=64 Identities=14% Similarity=0.200 Sum_probs=44.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC-
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK- 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~- 82 (329)
+++||+|||. |.+|.+++..|...|. +|..+|++ ... + .+.++ . +...++..+.+.
T Consensus 368 ~~~kIgIIGl-G~mG~slA~~L~~~G~-------~V~~~dr~----~~~-~-~a~~~-----G----v~~~~~~~el~~~ 424 (667)
T PLN02712 368 SKLKIAIVGF-GNFGQFLAKTMVKQGH-------TVLAYSRS----DYS-D-EAQKL-----G----VSYFSDADDLCEE 424 (667)
T ss_pred CCCEEEEEec-CHHHHHHHHHHHHCcC-------EEEEEECC----hHH-H-HHHHc-----C----CeEeCCHHHHHhc
Confidence 4589999998 9999999999998775 89999998 221 1 11111 1 123345555554
Q ss_pred CccEEEEe
Q psy9582 83 DANIAILI 90 (329)
Q Consensus 83 ~aDiVi~~ 90 (329)
++|+||++
T Consensus 425 ~aDvVILa 432 (667)
T PLN02712 425 HPEVILLC 432 (667)
T ss_pred CCCEEEEC
Confidence 58999998
No 340
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.71 E-value=0.008 Score=51.11 Aligned_cols=32 Identities=34% Similarity=0.642 Sum_probs=29.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||+|+|+ |.+|+.++..|+..|. + +++|+|.+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv-g-----~i~lvD~D 32 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV-G-----NLKLVDFD 32 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 6899998 9999999999999887 3 79999998
No 341
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.71 E-value=0.011 Score=55.09 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=60.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|. |.||+.+|..|...|. +|..||.. .+...+ ... +....++.+.+++|
T Consensus 136 g~tvgIvG~-G~IG~~vA~~l~afG~-------~V~~~~~~----~~~~~~----~~~--------~~~~~~l~e~l~~a 191 (312)
T PRK15469 136 DFTIGILGA-GVLGSKVAQSLQTWGF-------PLRCWSRS----RKSWPG----VQS--------FAGREELSAFLSQT 191 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----CCCCCC----cee--------ecccccHHHHHhcC
Confidence 479999999 9999999999998887 89999987 221111 000 11123567899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+|+++..... .+..++- .+.+... +|++++||++-
T Consensus 192 Dvvv~~lPlt~-----------~T~~li~--~~~l~~m-k~ga~lIN~aR 227 (312)
T PRK15469 192 RVLINLLPNTP-----------ETVGIIN--QQLLEQL-PDGAYLLNLAR 227 (312)
T ss_pred CEEEECCCCCH-----------HHHHHhH--HHHHhcC-CCCcEEEECCC
Confidence 99999732211 1112221 3445554 58899999983
No 342
>PRK07574 formate dehydrogenase; Provisional
Probab=96.70 E-value=0.0089 Score=57.25 Aligned_cols=94 Identities=15% Similarity=0.253 Sum_probs=60.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|. |.||+.+|..|...|. +|..+|+. ....+ ..... .++...++.+.++.|
T Consensus 192 gktVGIvG~-G~IG~~vA~~l~~fG~-------~V~~~dr~----~~~~~-----~~~~~-----g~~~~~~l~ell~~a 249 (385)
T PRK07574 192 GMTVGIVGA-GRIGLAVLRRLKPFDV-------KLHYTDRH----RLPEE-----VEQEL-----GLTYHVSFDSLVSVC 249 (385)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEECCC----CCchh-----hHhhc-----CceecCCHHHHhhcC
Confidence 478999999 9999999999998777 89999987 21111 11100 122234577899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+|++...... .+-.++- .+.+... ++++++||++-
T Consensus 250 DvV~l~lPlt~-----------~T~~li~--~~~l~~m-k~ga~lIN~aR 285 (385)
T PRK07574 250 DVVTIHCPLHP-----------ETEHLFD--ADVLSRM-KRGSYLVNTAR 285 (385)
T ss_pred CEEEEcCCCCH-----------HHHHHhC--HHHHhcC-CCCcEEEECCC
Confidence 99999733211 1111111 2344443 57899999973
No 343
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.69 E-value=0.014 Score=51.42 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=62.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc-cchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ-KAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~-~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
.+++.|+||+|.+|.+++..|++.|. +|++.+++..... ..+.....|+.+. .....+.+..
T Consensus 5 ~k~~lVtGas~~iG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~----------~~~~~~~~~~ 67 (235)
T PRK06550 5 TKTVLITGAASGIGLAQARAFLAQGA-------QVYGVDKQDKPDLSGNFHFLQLDLSDD----------LEPLFDWVPS 67 (235)
T ss_pred CCEEEEcCCCchHHHHHHHHHHHCCC-------EEEEEeCCcccccCCcEEEEECChHHH----------HHHHHHhhCC
Confidence 46899999999999999999999887 8999998721100 0000011111110 0112234567
Q ss_pred ccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q psy9582 84 ANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGN 134 (329)
Q Consensus 84 aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tN 134 (329)
.|++|+.+|... .+ ..+ ....+..|+.....+.+.+.... .+.+.+++++-
T Consensus 68 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 127 (235)
T PRK06550 68 VDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS 127 (235)
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 899999988542 11 112 22345566655444444443221 13345666553
No 344
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.01 Score=53.04 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|++++..|+..|. +|.+++++
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~-------~Vi~~~r~ 42 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGA-------KVVLASRR 42 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 37899999999999999999999887 89999998
No 345
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.69 E-value=0.0099 Score=51.97 Aligned_cols=96 Identities=16% Similarity=0.238 Sum_probs=65.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|||+ |.+|..+...+..+. .+.+ -+.+||.+ .+++.. +... .... .+++..+.+.+.|
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~-~~~e---~v~v~D~~----~ek~~~----~~~~---~~~~--~~s~ide~~~~~D 62 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGR-VDFE---LVAVYDRD----EEKAKE----LEAS---VGRR--CVSDIDELIAEVD 62 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCC-ccee---EEEEecCC----HHHHHH----HHhh---cCCC--ccccHHHHhhccc
Confidence 58999998 999999887776553 2212 68889998 444432 2211 1111 1255666779999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 86 IAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 86 iVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
+++.+|+. +.+++++.++-+.+ .|.+|+-++--+
T Consensus 63 lvVEaAS~----------------~Av~e~~~~~L~~g-~d~iV~SVGALa 96 (255)
T COG1712 63 LVVEAASP----------------EAVREYVPKILKAG-IDVIVMSVGALA 96 (255)
T ss_pred eeeeeCCH----------------HHHHHHhHHHHhcC-CCEEEEechhcc
Confidence 99998753 68899998888875 787776665444
No 346
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.69 E-value=0.0061 Score=57.15 Aligned_cols=74 Identities=11% Similarity=0.151 Sum_probs=51.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+++|+|+ |..|...+..++...-+. +|.++|++ .++.+....++++.. + ..+....+..+++.++
T Consensus 127 ~~~v~iiGa-G~~a~~~~~al~~~~~~~-----~v~v~~r~----~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~~~a 193 (325)
T PRK08618 127 AKTLCLIGT-GGQAKGQLEAVLAVRDIE-----RVRVYSRT----FEKAYAFAQEIQSKF-N--TEIYVVNSADEAIEEA 193 (325)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCCcc-----EEEEECCC----HHHHHHHHHHHHHhc-C--CcEEEeCCHHHHHhcC
Confidence 478999998 999988777665432233 89999999 666665555554321 1 1344556677899999
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|+|+.+.
T Consensus 194 DiVi~aT 200 (325)
T PRK08618 194 DIIVTVT 200 (325)
T ss_pred CEEEEcc
Confidence 9999874
No 347
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.68 E-value=0.0051 Score=59.72 Aligned_cols=105 Identities=13% Similarity=0.159 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+|+|+|+ |.+|..++..|...|.. +|+++|++ .+++...+..+... .+ ...+..+++.++
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~~------~V~v~~rs----~~ra~~la~~~g~~------~i-~~~~l~~~l~~a 241 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGVG------KILIANRT----YERAEDLAKELGGE------AV-KFEDLEEYLAEA 241 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCC------EEEEEeCC----HHHHHHHHHHcCCe------Ee-eHHHHHHHHhhC
Confidence 479999998 99999999999887743 79999998 44444333322210 11 113456788999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhHH
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNT 140 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~~ 140 (329)
|+||.+.+.+.. -.+ .+..+....--....+++-+++|-|+-.
T Consensus 242 DvVi~aT~s~~~-ii~------------~e~l~~~~~~~~~~~~viDla~Prdid~ 284 (417)
T TIGR01035 242 DIVISSTGAPHP-IVS------------KEDVERALRERTRPLFIIDIAVPRDVDP 284 (417)
T ss_pred CEEEECCCCCCc-eEc------------HHHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence 999998655431 011 1111222111012458888999977643
No 348
>PRK08324 short chain dehydrogenase; Validated
Probab=96.68 E-value=0.0072 Score=62.43 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=64.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCcccc---
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITA--- 80 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~a--- 80 (329)
+++.|+||+|.+|..++..|+..|. +|+++|++ .+.++.....+............++ .+..++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga-------~Vvl~~r~----~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~ 491 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGA-------CVVLADLD----EEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEE 491 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEeCC----HHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHH
Confidence 6899999999999999999999886 89999998 4444333222321100000001111 111112
Q ss_pred ----cCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhcCCCeEEEEEc
Q psy9582 81 ----FKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQ----GKALNSVASRDVKVLVVG 133 (329)
Q Consensus 81 ----l~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i----~~~i~~~~~p~a~viv~t 133 (329)
..+.|+||.++|..... ..+ ....+..|+.....+ .+.+++.. ..+.|++++
T Consensus 492 ~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vs 557 (681)
T PRK08324 492 AALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIA 557 (681)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEEC
Confidence 34689999998864321 112 223345555544444 44444432 235565555
No 349
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.68 E-value=0.0089 Score=53.89 Aligned_cols=118 Identities=13% Similarity=0.096 Sum_probs=65.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecC-----
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHEN----- 76 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~----- 76 (329)
.+++.|+||+|.+|.+++..|+..|. +|++.+++ .++++....++....... ..+++-..+
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~-------~vv~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGA-------TIVFNDIN----QELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMV 78 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCC----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 36799999999999999999999887 89999887 444443333333211000 001100001
Q ss_pred --cccccCCccEEEEeCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 77 --PITAFKDANIAILIGSFPRK-S--NME---RSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 77 --~~~al~~aDiVi~~~g~~~~-~--g~~---~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP 135 (329)
..+.+...|++|+++|.... + ..+ ....+..|.... +.+.+.+.+. ..+.|++++..
T Consensus 79 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS~ 147 (265)
T PRK07097 79 SQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK--GHGKIINICSM 147 (265)
T ss_pred HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCc
Confidence 11223457999999886321 1 111 223344555433 3444445442 34566676654
No 350
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.67 E-value=0.0034 Score=55.73 Aligned_cols=104 Identities=20% Similarity=0.237 Sum_probs=61.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC----CcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS----NKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~----~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
..||.|+|| |.+|..++..|...|.-. + +|+++|++ .+. .+.+......+.+.. .. .. ...++.++
T Consensus 25 ~~rvlvlGA-GgAg~aiA~~L~~~G~~~-~---~i~ivdr~gl~~~~r-~~~L~~~~~~la~~~-~~-~~--~~~~l~~~ 94 (226)
T cd05311 25 EVKIVINGA-GAAGIAIARLLLAAGAKP-E---NIVVVDSKGVIYEGR-EDDLNPDKNEIAKET-NP-EK--TGGTLKEA 94 (226)
T ss_pred CCEEEEECc-hHHHHHHHHHHHHcCcCc-c---eEEEEeCCCcccccc-chhhhHHHHHHHHHh-cc-Cc--ccCCHHHH
Confidence 469999999 999999999999887631 1 69999998 111 011111222222111 00 01 11245688
Q ss_pred cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh
Q psy9582 81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN 137 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~ 137 (329)
++++|+||-+.+ +|+- + .+..+.|. ++.+++..+||..
T Consensus 95 l~~~dvlIgaT~----~G~~-------~----~~~l~~m~----~~~ivf~lsnP~~ 132 (226)
T cd05311 95 LKGADVFIGVSR----PGVV-------K----KEMIKKMA----KDPIVFALANPVP 132 (226)
T ss_pred HhcCCEEEeCCC----CCCC-------C----HHHHHhhC----CCCEEEEeCCCCC
Confidence 899999998754 3321 0 13333332 4557777889974
No 351
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.0033 Score=56.39 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|+.++..|++.|. +|++++++
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~r~ 42 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGA-------RVVTTARS 42 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCC-------EEEEEeCC
Confidence 37899999999999999999999887 89999987
No 352
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.65 E-value=0.0075 Score=56.58 Aligned_cols=73 Identities=15% Similarity=0.256 Sum_probs=53.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..+++|||+ |..|...+..|.. .++ . +|++++++ .++++..+.++.+.. + .++....+..+++.+
T Consensus 129 ~~~v~iiGa-G~qA~~~~~al~~~~~i-~-----~v~V~~R~----~~~a~~~a~~~~~~~-g--~~v~~~~~~~~av~~ 194 (326)
T TIGR02992 129 SSVVAIFGA-GMQARLQLEALTLVRDI-R-----SARIWARD----SAKAEALALQLSSLL-G--IDVTAATDPRAAMSG 194 (326)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHhCCc-c-----EEEEECCC----HHHHHHHHHHHHhhc-C--ceEEEeCCHHHHhcc
Confidence 468999998 9999988888874 443 3 89999999 666666655554321 1 234555677889999
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
||+|+.+.
T Consensus 195 aDiVvtaT 202 (326)
T TIGR02992 195 ADIIVTTT 202 (326)
T ss_pred CCEEEEec
Confidence 99999874
No 353
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.64 E-value=0.0083 Score=53.33 Aligned_cols=32 Identities=25% Similarity=0.175 Sum_probs=27.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+|.|+||+|++|+.++..|++.|. +|++.+.+
T Consensus 4 ~ilItGas~giG~~la~~l~~~g~-------~v~~~~~~ 35 (248)
T PRK06947 4 VVLITGASRGIGRATAVLAAARGW-------SVGINYAR 35 (248)
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 799999999999999999999886 77776543
No 354
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.64 E-value=0.0036 Score=56.43 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|.+++..|++.|. +|++.|++
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~-------~v~~~~~~ 42 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGA-------NVVNADIH 42 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 46899999999999999999999987 89999988
No 355
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.011 Score=50.79 Aligned_cols=105 Identities=11% Similarity=0.058 Sum_probs=60.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|++.|+||+|.+|..++..|++. . +|.+.+++ .+. ...|+.+... + ....+.+...|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~-------~vi~~~r~----~~~---~~~D~~~~~~-----~---~~~~~~~~~id 57 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H-------EVITAGRS----SGD---VQVDITDPAS-----I---RALFEKVGKVD 57 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C-------cEEEEecC----CCc---eEecCCChHH-----H---HHHHHhcCCCC
Confidence 37999999999999999999887 3 79999887 221 2234433210 0 00112234689
Q ss_pred EEEEeCCCCCC-C--CCCHH---HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 86 IAILIGSFPRK-S--NMERS---ELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 86 iVi~~~g~~~~-~--g~~~~---~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
++|..+|.... + ..+.. ..+..|+.....+.+...++-.+.+.+++++
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 99998886431 1 12222 3344566555555554444322344555554
No 356
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.017 Score=51.41 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=30.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|++|++++..|++.|. +|.+++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~-------~V~~~~r~ 34 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT-------HVISISRT 34 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC-------EEEEEeCC
Confidence 3799999999999999999999887 89999987
No 357
>PRK06484 short chain dehydrogenase; Validated
Probab=96.63 E-value=0.0043 Score=61.71 Aligned_cols=120 Identities=16% Similarity=0.197 Sum_probs=69.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCc-------
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENP------- 77 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~------- 77 (329)
.+++.|+||+|.+|.+++..|++.|. +|++.|++ .++++.....+......+..++.-..+.
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD-------RLLIIDRD----AEGAKKLAEALGDEHLSVQADITDEAAVESAFAQI 337 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999987 89999998 4444332222211000000011000111
Q ss_pred ccccCCccEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 78 ITAFKDANIAILIGSFPR--KS--NME---RSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 78 ~~al~~aDiVi~~~g~~~--~~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
.+.+...|++|+.+|... .+ ..+ ....+..|+.....+.+.+..+-...+.||++|..
T Consensus 338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 112345799999988642 12 122 33456667766655555554443344677777654
No 358
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.63 E-value=0.0049 Score=56.57 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=60.2
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--CccE
Q psy9582 9 SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--DANI 86 (329)
Q Consensus 9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~aDi 86 (329)
.|+||+|++|++++..|+..+. ++++.... . + .|+.+.. ++.+.++ +.|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~-------~v~~~~~~----~---~---~Dl~~~~-----------~l~~~~~~~~~d~ 52 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF-------TNLVLRTH----K---E---LDLTRQA-----------DVEAFFAKEKPTY 52 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC-------cEEEeecc----c---c---CCCCCHH-----------HHHHHHhccCCCE
Confidence 3899999999999999998876 55554433 1 1 2333211 1222222 5799
Q ss_pred EEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 87 AILIGSFPRK---SNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 87 Vi~~~g~~~~---~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
||++|+.... ......+....|......+++.+++.. .. .+|.+|
T Consensus 53 Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~-~~i~~S 100 (306)
T PLN02725 53 VILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VK-KLLFLG 100 (306)
T ss_pred EEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CC-eEEEeC
Confidence 9999875321 112344567889999999999999863 33 344443
No 359
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.63 E-value=0.0073 Score=56.11 Aligned_cols=73 Identities=5% Similarity=-0.024 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
...+++|+|+ |..|...+..+.. .+. . +|.++|++ .++++..+..+.+.. ..+. ..+..+++.
T Consensus 124 ~~~~v~IiGa-G~qa~~~~~al~~~~~~-~-----~v~v~~r~----~~~a~~~a~~~~~~~----~~~~-~~~~~~av~ 187 (304)
T PRK07340 124 PPGDLLLIGT-GVQARAHLEAFAAGLPV-R-----RVWVRGRT----AASAAAFCAHARALG----PTAE-PLDGEAIPE 187 (304)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHhCCC-C-----EEEEEcCC----HHHHHHHHHHHHhcC----CeeE-ECCHHHHhh
Confidence 3579999998 9999999988875 443 2 89999999 666666655554321 1222 356678999
Q ss_pred CccEEEEeCC
Q psy9582 83 DANIAILIGS 92 (329)
Q Consensus 83 ~aDiVi~~~g 92 (329)
+||+|+.+..
T Consensus 188 ~aDiVitaT~ 197 (304)
T PRK07340 188 AVDLVVTATT 197 (304)
T ss_pred cCCEEEEccC
Confidence 9999998743
No 360
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.63 E-value=0.0051 Score=54.80 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|+.++..|++.|. ++++++++
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~-------~v~~~~~~ 41 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGA-------KVIGFDQA 41 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence 36899999999999999999999887 89999987
No 361
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.028 Score=51.17 Aligned_cols=113 Identities=13% Similarity=0.158 Sum_probs=61.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cccc----
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NPIT---- 79 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~~~---- 79 (329)
.+.|+|| |++|.+++..|. .|. +|++.|++ .+.++....++....... .....++. +..+
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~-------~Vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~ 70 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK-------KVLLADYN----EENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAAT 70 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence 5667776 899999999986 565 89999998 333433333332211000 00111111 1111
Q ss_pred --ccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 80 --AFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 80 --al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
.+...|++|..+|... ...+....+..|+.....+.+.+.+...+++.+++++
T Consensus 71 ~~~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~is 125 (275)
T PRK06940 71 AQTLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIA 125 (275)
T ss_pred HHhcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 1246899999998753 2234556677777666655555544322233344444
No 362
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.052 Score=48.42 Aligned_cols=116 Identities=13% Similarity=0.101 Sum_probs=64.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Ccc----
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NPI---- 78 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~~---- 78 (329)
+++.|+||+|.+|.+++..|++.|. .|++.|++ .+.++....++....... .....++. +..
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 70 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA-------NVVITGRT----KEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVE 70 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 5789999999999999999999887 89999998 444443333333211000 00111111 111
Q ss_pred ---cccCCccEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhcCCCeEEEEEc
Q psy9582 79 ---TAFKDANIAILIGSFPRK-S--NMER---SELLAINSSIFIEQGKAL----NSVASRDVKVLVVG 133 (329)
Q Consensus 79 ---~al~~aDiVi~~~g~~~~-~--g~~~---~~~~~~n~~~~~~i~~~i----~~~~~p~a~viv~t 133 (329)
+.+...|++|..+|.... + ..+. ...+..|+.....+.+.+ .+.. ..+.++++|
T Consensus 71 ~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~ii~is 137 (252)
T PRK07677 71 QIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG-IKGNIINMV 137 (252)
T ss_pred HHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CCEEEEEEc
Confidence 113467999998875321 1 2222 334555655444444443 3322 346677766
No 363
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.61 E-value=0.0033 Score=56.35 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|.+++..|+..|. +|++++++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~-------~vv~~~~~ 41 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGA-------DIVGVGVA 41 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCc
Confidence 47899999999999999999999987 89999876
No 364
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0078 Score=52.83 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=30.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|++++..|++.|. +|.++|++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~ 34 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-------QVTATVRG 34 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-------EEEEEeCC
Confidence 4699999999999999999999887 89999998
No 365
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.0082 Score=54.42 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=30.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|..++..|+..|. +|++.+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~ 34 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-------EVWATARK 34 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 3699999999999999999998887 89999988
No 366
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.58 E-value=0.014 Score=55.63 Aligned_cols=58 Identities=17% Similarity=0.235 Sum_probs=43.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA 80 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
|-..++|+|||.+|-+|+.++..|.+. +. +|+-+|.+ .+. ..+..+.
T Consensus 1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~-------~V~g~D~~----d~~---------------------~~~~~~~ 48 (370)
T PRK08818 1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQL-------EVIGHDPA----DPG---------------------SLDPATL 48 (370)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCCC-------EEEEEcCC----ccc---------------------cCCHHHH
Confidence 334589999998899999999999975 33 88888875 110 0133567
Q ss_pred cCCccEEEEeC
Q psy9582 81 FKDANIAILIG 91 (329)
Q Consensus 81 l~~aDiVi~~~ 91 (329)
+++||+||++.
T Consensus 49 v~~aDlVilav 59 (370)
T PRK08818 49 LQRADVLIFSA 59 (370)
T ss_pred hcCCCEEEEeC
Confidence 88999999983
No 367
>PRK06823 ornithine cyclodeaminase; Validated
Probab=96.57 E-value=0.01 Score=55.34 Aligned_cols=74 Identities=15% Similarity=0.067 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
....++|+|+ |..+...+..+....-+. +|++||++ .++.+..+..+++. ..++....+..+++++
T Consensus 127 d~~~l~iiG~-G~qA~~~~~a~~~v~~i~-----~v~v~~r~----~~~a~~~~~~~~~~----~~~v~~~~~~~~av~~ 192 (315)
T PRK06823 127 HVSAIGIVGT-GIQARMQLMYLKNVTDCR-----QLWVWGRS----ETALEEYRQYAQAL----GFAVNTTLDAAEVAHA 192 (315)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhcCCCC-----EEEEECCC----HHHHHHHHHHHHhc----CCcEEEECCHHHHhcC
Confidence 3579999998 999988877777643333 99999999 66666554444332 1246666778899999
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
||+|+.+.
T Consensus 193 ADIV~taT 200 (315)
T PRK06823 193 ANLIVTTT 200 (315)
T ss_pred CCEEEEec
Confidence 99999763
No 368
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.56 E-value=0.0061 Score=56.86 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
+..+++|+|+ |..+...+..+.. .+ +. +|++||++ .++++..+.++++ . ...+....+.+++++
T Consensus 127 ~~~~l~viGa-G~QA~~~~~a~~~~~~-i~-----~v~v~~r~----~~~~~~~~~~~~~-~---~~~v~~~~~~~~av~ 191 (313)
T PF02423_consen 127 DARTLGVIGA-GVQARWHLRALAAVRP-IK-----EVRVYSRS----PERAEAFAARLRD-L---GVPVVAVDSAEEAVR 191 (313)
T ss_dssp T--EEEEE---SHHHHHHHHHHHHHS---S-----EEEEE-SS----HHHHHHHHHHHHC-C---CTCEEEESSHHHHHT
T ss_pred CCceEEEECC-CHHHHHHHHHHHHhCC-ce-----EEEEEccC----hhHHHHHHHhhcc-c---cccceeccchhhhcc
Confidence 3578999998 9999888777765 45 44 99999999 6677767667765 1 235677788899999
Q ss_pred CccEEEEe
Q psy9582 83 DANIAILI 90 (329)
Q Consensus 83 ~aDiVi~~ 90 (329)
+||+|+.+
T Consensus 192 ~aDii~ta 199 (313)
T PF02423_consen 192 GADIIVTA 199 (313)
T ss_dssp TSSEEEE-
T ss_pred cCCEEEEc
Confidence 99998875
No 369
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.56 E-value=0.0096 Score=54.34 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=29.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||.|+||+|++|++++..|++.|. +|+.+.++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-------~V~~~~R~ 32 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-------PFLVASRS 32 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-------cEEEEeCC
Confidence 589999999999999999999887 89999998
No 370
>PRK05855 short chain dehydrogenase; Validated
Probab=96.54 E-value=0.0082 Score=60.19 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=67.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeec--Cc----
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHE--NP---- 77 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~--~~---- 77 (329)
..++.|+||+|++|.+++..|++.|. +|++.+++ .+.++....++....... .....++. +.
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~ 383 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGA-------EVVASDID----EAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFA 383 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 36899999999999999999999987 89999998 444444433443211000 00011110 11
Q ss_pred ---ccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhcCCCeEEEEEcC
Q psy9582 78 ---ITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIE----QGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 78 ---~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~----i~~~i~~~~~p~a~viv~tN 134 (329)
.+.+...|++|+.+|..... ..+ ....+..|+..... +.+.+.+.. ..+.||++|-
T Consensus 384 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~~sS 452 (582)
T PRK05855 384 EWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVNVAS 452 (582)
T ss_pred HHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECC
Confidence 11233579999999875321 112 22345566544444 444555542 3456666654
No 371
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.53 E-value=0.012 Score=53.95 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=51.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..++.|+|+ |.+|.+++..|...|.. +|++++++ .++++..+.++.... .+.+..+..+.+.++
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~------~V~v~~R~----~~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~ 186 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGVA------EITIVNRT----VERAEELAKLFGALG-----KAELDLELQEELADF 186 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCC------EEEEEeCC----HHHHHHHHHHhhhcc-----ceeecccchhccccC
Confidence 468999998 99999999999988853 89999998 555554443333211 122212345678899
Q ss_pred cEEEEeCCC
Q psy9582 85 NIAILIGSF 93 (329)
Q Consensus 85 DiVi~~~g~ 93 (329)
|+||.+...
T Consensus 187 DivInaTp~ 195 (278)
T PRK00258 187 DLIINATSA 195 (278)
T ss_pred CEEEECCcC
Confidence 999997543
No 372
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.52 E-value=0.016 Score=52.75 Aligned_cols=67 Identities=13% Similarity=0.199 Sum_probs=44.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCce-EEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPII-LQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
+||+|||+ |.+|..++..+...+. + .+ +.++|++ .++.+. +.+. + .....++..+.+.++
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~-~----~elv~v~d~~----~~~a~~----~a~~---~--~~~~~~~~~ell~~~ 62 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRI-N----AELYAFYDRN----LEKAEN----LASK---T--GAKACLSIDELVEDV 62 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCC-C----eEEEEEECCC----HHHHHH----HHHh---c--CCeeECCHHHHhcCC
Confidence 48999998 9999999998887541 1 13 5688888 443332 2111 1 123345556666899
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|+|++++
T Consensus 63 DvVvi~a 69 (265)
T PRK13304 63 DLVVECA 69 (265)
T ss_pred CEEEEcC
Confidence 9999985
No 373
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.52 E-value=0.0076 Score=56.77 Aligned_cols=77 Identities=21% Similarity=0.388 Sum_probs=49.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccc
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITA 80 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
|..+++||+|+||+|.+|..+...|.....+.-. +|.++.... -.|....+.. .++.+..-..++
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~---~l~~~aS~~------saGk~~~~~~------~~l~v~~~~~~~ 65 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIA---EVTLLSSKR------SAGKTVQFKG------REIIIQEAKINS 65 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcc---cEEEEECcc------cCCCCeeeCC------cceEEEeCCHHH
Confidence 4456789999999999999999988865554211 588886651 1222222211 134443323456
Q ss_pred cCCccEEEEeCC
Q psy9582 81 FKDANIAILIGS 92 (329)
Q Consensus 81 l~~aDiVi~~~g 92 (329)
++++|+||++++
T Consensus 66 ~~~~Divf~a~~ 77 (347)
T PRK06728 66 FEGVDIAFFSAG 77 (347)
T ss_pred hcCCCEEEECCC
Confidence 789999999754
No 374
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.52 E-value=0.0034 Score=57.74 Aligned_cols=98 Identities=19% Similarity=0.292 Sum_probs=58.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
|||.|+||+|.+|+++...|...+. +++.+++.+ .|+.+.. . + ....+.. .-|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~-------~v~~~~r~~-----------~dl~d~~-~----~---~~~~~~~-~pd 53 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY-------EVIATSRSD-----------LDLTDPE-A----V---AKLLEAF-KPD 53 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE-------EEEEESTTC-----------S-TTSHH-H----H---HHHHHHH---S
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC-------EEEEeCchh-----------cCCCCHH-H----H---HHHHHHh-CCC
Confidence 6899999999999999999998876 788885541 1222211 0 0 0111222 478
Q ss_pred EEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 86 IAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 86 iVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+||++++..... ..........|+.....+++...+. ++.+|.+|
T Consensus 54 ~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~---~~~li~~S 100 (286)
T PF04321_consen 54 VVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER---GARLIHIS 100 (286)
T ss_dssp EEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC---T-EEEEEE
T ss_pred eEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc---CCcEEEee
Confidence 999998764311 1234455678999999999988875 34555554
No 375
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.014 Score=53.59 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+.+.|+||++.+|.+++..|++.|. +|++.|++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-------~vii~~~~ 39 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIG 39 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeeCC
Confidence 347899999999999999999999887 89999876
No 376
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.50 E-value=0.0079 Score=52.90 Aligned_cols=118 Identities=15% Similarity=0.190 Sum_probs=65.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEee--cCccccc---
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVH--ENPITAF--- 81 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~--~~~~~al--- 81 (329)
|.|+|++|.+|+.++..|++.|. +|.+.+++. .+.+.....++.+..... .....++ .+..+.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-------~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-------KVIITYRSS---EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEI 70 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCc---hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999887 899998872 122333333333221000 0011111 1111222
Q ss_pred ----CCccEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhhc--CCCeEEEEEcCc
Q psy9582 82 ----KDANIAILIGSFPRKS---N---MERSELLAINSSIFIEQGKALNSVA--SRDVKVLVVGNP 135 (329)
Q Consensus 82 ----~~aDiVi~~~g~~~~~---g---~~~~~~~~~n~~~~~~i~~~i~~~~--~p~a~viv~tNP 135 (329)
...|+||+.+|..... + ......+..|+.....+.+.+.++. .....++++|-.
T Consensus 71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 71 EEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 3469999988764211 1 1233455677776666666665442 123455665543
No 377
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.50 E-value=0.0076 Score=54.98 Aligned_cols=36 Identities=22% Similarity=0.122 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 3 KKPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 3 ~~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+.+.+.|+||+ +.+|..++..|++.|. .|++.|++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~-------~Vil~~r~ 40 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA-------ELAFTYLN 40 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEecC
Confidence 345789999996 6899999999999987 89999987
No 378
>PLN03139 formate dehydrogenase; Provisional
Probab=96.49 E-value=0.013 Score=56.02 Aligned_cols=94 Identities=11% Similarity=0.191 Sum_probs=60.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|. |.||+.+|..|..-|. +|..+|.. ....+ .. .+. .+....++.+.+++|
T Consensus 199 gktVGIVG~-G~IG~~vA~~L~afG~-------~V~~~d~~----~~~~~-~~---~~~------g~~~~~~l~ell~~s 256 (386)
T PLN03139 199 GKTVGTVGA-GRIGRLLLQRLKPFNC-------NLLYHDRL----KMDPE-LE---KET------GAKFEEDLDAMLPKC 256 (386)
T ss_pred CCEEEEEee-cHHHHHHHHHHHHCCC-------EEEEECCC----Ccchh-hH---hhc------CceecCCHHHHHhhC
Confidence 479999998 9999999999998776 89999987 21111 10 111 122234677889999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+|++...... .+..++- .+.+... +|++++|+++-
T Consensus 257 DvV~l~lPlt~-----------~T~~li~--~~~l~~m-k~ga~lIN~aR 292 (386)
T PLN03139 257 DVVVINTPLTE-----------KTRGMFN--KERIAKM-KKGVLIVNNAR 292 (386)
T ss_pred CEEEEeCCCCH-----------HHHHHhC--HHHHhhC-CCCeEEEECCC
Confidence 99999732211 1111221 2344444 58899999873
No 379
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.48 E-value=0.032 Score=57.53 Aligned_cols=87 Identities=9% Similarity=0.074 Sum_probs=57.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE--ecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL--EASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~--D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
.|||.|+||+|++|++++..|...+. ++... |+. + ......++. . .
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~-------~v~~~~~~l~-----d-~~~v~~~i~------------------~-~ 427 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGI-------AYEYGKGRLE-----D-RSSLLADIR------------------N-V 427 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCC-------eEEeeccccc-----c-HHHHHHHHH------------------h-h
Confidence 47999999999999999999988775 55311 111 0 000000110 0 2
Q ss_pred CccEEEEeCCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582 83 DANIAILIGSFPRKS--N---MERSELLAINSSIFIEQGKALNSVA 123 (329)
Q Consensus 83 ~aDiVi~~~g~~~~~--g---~~~~~~~~~n~~~~~~i~~~i~~~~ 123 (329)
+.|+||++|+....+ + ....+.+..|+.....+++.+++..
T Consensus 428 ~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g 473 (668)
T PLN02260 428 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG 473 (668)
T ss_pred CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC
Confidence 579999998764322 1 2345667899999999999999863
No 380
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.48 E-value=0.012 Score=53.74 Aligned_cols=95 Identities=18% Similarity=0.318 Sum_probs=66.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC--C
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK--D 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~--~ 83 (329)
|||.|+|++|.+|+.|...|. .+. +|.-.|.. . +|+.+.. ...+.++ .
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~-------~v~a~~~~----~-------~Ditd~~-----------~v~~~i~~~~ 50 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF-------EVIATDRA----E-------LDITDPD-----------AVLEVIRETR 50 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc-------eEEeccCc----c-------ccccChH-----------HHHHHHHhhC
Confidence 459999999999999988887 433 78877776 2 3443321 1233444 3
Q ss_pred ccEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 84 ANIAILIGSFPRKS--NMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 84 aDiVi~~~g~~~~~--g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
-|+||++|....-. ..++..-+..|+.....+++..++++ +++|.+|
T Consensus 51 PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g---a~lVhiS 99 (281)
T COG1091 51 PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG---ARLVHIS 99 (281)
T ss_pred CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC---CeEEEee
Confidence 49999998865432 23456667899999999999999874 4655554
No 381
>PRK07589 ornithine cyclodeaminase; Validated
Probab=96.45 E-value=0.0096 Score=56.22 Aligned_cols=73 Identities=10% Similarity=0.077 Sum_probs=54.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+++|||+ |..+...+..++.-.-+. +|++||++ .++.+..+.++++. + .++....+..+++++|
T Consensus 129 a~~l~iiGa-G~QA~~~l~a~~~vr~i~-----~V~v~~r~----~~~a~~~~~~~~~~--~--~~v~~~~~~~~av~~A 194 (346)
T PRK07589 129 SRTMALIGN-GAQSEFQALAFKALLGIE-----EIRLYDID----PAATAKLARNLAGP--G--LRIVACRSVAEAVEGA 194 (346)
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCce-----EEEEEeCC----HHHHHHHHHHHHhc--C--CcEEEeCCHHHHHhcC
Confidence 578999998 999987776665532233 99999999 66666666666542 1 2466677889999999
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|+|+.+.
T Consensus 195 DIIvtaT 201 (346)
T PRK07589 195 DIITTVT 201 (346)
T ss_pred CEEEEec
Confidence 9999864
No 382
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.43 E-value=0.0096 Score=54.82 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=62.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+++|+|+ |.+|..++..|...|. +|+++|++ .+++.. . ... .. ..+. ..++.+.++++
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G~-------~V~v~~R~----~~~~~~-~---~~~--g~-~~~~-~~~l~~~l~~a 210 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALGA-------RVFVGARS----SADLAR-I---TEM--GL-IPFP-LNKLEEKVAEI 210 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH-H---HHC--CC-eeec-HHHHHHHhccC
Confidence 479999999 9999999999998886 89999998 333221 1 111 11 0111 13456788999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc-CchhhHHHHHHH
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG-NPVNTNTYITMK 145 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t-NP~~~~~~~~~~ 145 (329)
|+||.+.... ++ + . +.+... ++++++|.++ +|-..--..+.+
T Consensus 211 DiVint~P~~---------ii--~----~---~~l~~~-k~~aliIDlas~Pg~tdf~~Ak~ 253 (287)
T TIGR02853 211 DIVINTIPAL---------VL--T----A---DVLSKL-PKHAVIIDLASKPGGTDFEYAKK 253 (287)
T ss_pred CEEEECCChH---------Hh--C----H---HHHhcC-CCCeEEEEeCcCCCCCCHHHHHH
Confidence 9999974211 11 1 1 223333 4788888774 775532244444
No 383
>PLN02858 fructose-bisphosphate aldolase
Probab=96.43 E-value=0.012 Score=64.96 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=51.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
|....||++||- |.||+.+|..|+..|. +|..||++ .++.+ ++.+.. .....+..++.
T Consensus 1 ~~~~~~IGfIGL-G~MG~~mA~~L~~~G~-------~v~v~dr~----~~~~~----~l~~~G------a~~~~s~~e~a 58 (1378)
T PLN02858 1 AQSAGVVGFVGL-DSLSFELASSLLRSGF-------KVQAFEIS----TPLME----KFCELG------GHRCDSPAEAA 58 (1378)
T ss_pred CCCCCeEEEEch-hHHHHHHHHHHHHCCC-------eEEEEcCC----HHHHH----HHHHcC------CeecCCHHHHH
Confidence 455689999998 9999999999999987 89999998 44443 233221 22335567888
Q ss_pred CCccEEEEeC
Q psy9582 82 KDANIAILIG 91 (329)
Q Consensus 82 ~~aDiVi~~~ 91 (329)
++||+||++.
T Consensus 59 ~~advVi~~l 68 (1378)
T PLN02858 59 KDAAALVVVL 68 (1378)
T ss_pred hcCCEEEEEc
Confidence 9999999973
No 384
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=96.42 E-value=0.034 Score=52.02 Aligned_cols=118 Identities=15% Similarity=0.088 Sum_probs=66.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc---CCc-cceEe-ecC-----
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF---PLL-VDVSV-HEN----- 76 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~---~~~-~~i~~-~~~----- 76 (329)
+|.|+||+|++|++++..|+..+... +|+++.++... ....+.....+..... ... ..+.. ..|
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~-----~V~~l~R~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 74 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQA-----KVICLVRAASE-EHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPR 74 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCC-----EEEEEEccCCH-HHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCccc
Confidence 58899999999999999999887322 79999887211 0001111111111000 000 11211 111
Q ss_pred -------cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 77 -------PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 77 -------~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
..+..+++|+||++++... ...+..++...|+.....+.+.+.+.. ... ++.+|
T Consensus 75 ~gl~~~~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~-~v~iS 135 (367)
T TIGR01746 75 LGLSDAEWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGR-AKP-LHYVS 135 (367)
T ss_pred CCcCHHHHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCC-Cce-EEEEc
Confidence 2234578999999887533 122344556788888888888887753 343 44443
No 385
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.41 E-value=0.0096 Score=55.15 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|++|.+++..|++.|. +|++.|+.
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga-------~Vv~~~~~ 45 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGA-------TVVVNDVA 45 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCC
Confidence 47899999999999999999999887 89999986
No 386
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.41 E-value=0.013 Score=51.04 Aligned_cols=68 Identities=12% Similarity=0.135 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEe--ecCccccc
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSV--HENPITAF 81 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~--~~~~~~al 81 (329)
+.+||.|||| |.+|...+..|+..|. +|++++.. . .....++.+.. .+.. ..-.++.+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga-------~V~VIs~~----~---~~~l~~l~~~~-----~i~~~~~~~~~~~l 68 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGA-------HIVVISPE----L---TENLVKLVEEG-----KIRWKQKEFEPSDI 68 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC-------eEEEEcCC----C---CHHHHHHHhCC-----CEEEEecCCChhhc
Confidence 3579999999 9999999999999885 89999765 1 11111222211 1111 11224578
Q ss_pred CCccEEEEeC
Q psy9582 82 KDANIAILIG 91 (329)
Q Consensus 82 ~~aDiVi~~~ 91 (329)
.++|+||.+.
T Consensus 69 ~~adlViaaT 78 (202)
T PRK06718 69 VDAFLVIAAT 78 (202)
T ss_pred CCceEEEEcC
Confidence 9999988873
No 387
>PRK06199 ornithine cyclodeaminase; Validated
Probab=96.39 E-value=0.011 Score=56.48 Aligned_cols=77 Identities=13% Similarity=0.252 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-CCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIAN-GDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
....++|+|+ |..+...+..++. ..-+. +|++||++ .++++..+.++.+.. +...++.+..+..++++
T Consensus 154 da~~l~iiG~-G~QA~~~l~a~~~v~~~i~-----~V~v~~r~----~~~a~~f~~~~~~~~-~~~~~v~~~~s~~eav~ 222 (379)
T PRK06199 154 DSKVVGLLGP-GVMGKTILAAFMAVCPGID-----TIKIKGRG----QKSLDSFATWVAETY-PQITNVEVVDSIEEVVR 222 (379)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHhcCCcc-----EEEEECCC----HHHHHHHHHHHHHhc-CCCceEEEeCCHHHHHc
Confidence 3579999998 9999888877776 33244 99999999 667776666665421 11124777788899999
Q ss_pred CccEEEEeC
Q psy9582 83 DANIAILIG 91 (329)
Q Consensus 83 ~aDiVi~~~ 91 (329)
+||+|+.+.
T Consensus 223 ~ADIVvtaT 231 (379)
T PRK06199 223 GSDIVTYCN 231 (379)
T ss_pred CCCEEEEcc
Confidence 999998753
No 388
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.39 E-value=0.0089 Score=56.19 Aligned_cols=75 Identities=17% Similarity=0.280 Sum_probs=46.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
|.+.+||+|+||+|.+|..+...|....+-. .+|.++..+. -.|....+.. .++.+..-...++
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~hP~----~~l~~laS~~------saG~~~~~~~------~~~~v~~~~~~~~ 64 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQFPV----GELYALASEE------SAGETLRFGG------KSVTVQDAAEFDW 64 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCCCc----eEEEEEEccC------cCCceEEECC------cceEEEeCchhhc
Confidence 4466899999999999999999888743210 1888885541 1122111211 1344432223345
Q ss_pred CCccEEEEeCC
Q psy9582 82 KDANIAILIGS 92 (329)
Q Consensus 82 ~~aDiVi~~~g 92 (329)
.++|+||++.+
T Consensus 65 ~~~Dvvf~a~p 75 (336)
T PRK08040 65 SQAQLAFFVAG 75 (336)
T ss_pred cCCCEEEECCC
Confidence 78999999754
No 389
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.38 E-value=0.011 Score=56.00 Aligned_cols=37 Identities=32% Similarity=0.528 Sum_probs=30.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||+ +||+|+||+|.+|+.++..|...+.+ +|+++...
T Consensus 1 ~~~--~~V~I~GatG~iG~~l~~~L~~~p~~------el~~~~~s 37 (349)
T PRK08664 1 MMK--LKVGILGATGMVGQRFVQLLANHPWF------EVTALAAS 37 (349)
T ss_pred CCC--cEEEEECCCCHHHHHHHHHHHcCCCc------eEEEEEcC
Confidence 564 79999999999999999988876543 78888544
No 390
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=96.38 E-value=0.0063 Score=60.47 Aligned_cols=118 Identities=18% Similarity=0.199 Sum_probs=75.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHh-----CCCCCCCC-CceEEEEecCC--cccc-cchhhhHhhhhhcccCCccceEeecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIAN-----GDLLGKDQ-PIILQLLEASN--KKSQ-KAIKGVIMEIEDCIFPLLVDVSVHEN 76 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~-----~~~~~~~~-~~ei~L~D~~~--~~~~-~~~~~~~~dl~~~~~~~~~~i~~~~~ 76 (329)
.||.+.|| |..|..++..|.. .|+- .++ .-.++++|.+- -... +.+......+. .......+
T Consensus 322 ~riv~~GA-GsAgigia~ll~~~~~~~~Gls-~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa-------~~~~~~~~ 392 (581)
T PLN03129 322 QRILFAGA-GEAGTGIAELIALAMSRQTGIS-EEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFA-------HDHEPGAS 392 (581)
T ss_pred ceEEEECC-CHHHHHHHHHHHHHHHhhcCCC-hhhhcCcEEEEcCCCeEeCCCCccChHHHHHHH-------hhcccCCC
Confidence 69999999 9999999988876 3542 122 12899999871 0000 00111111111 11112357
Q ss_pred cccccCC--ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch---hhHHHHHHHHC
Q psy9582 77 PITAFKD--ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV---NTNTYITMKSA 147 (329)
Q Consensus 77 ~~~al~~--aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~---~~~~~~~~~~~ 147 (329)
+.+++++ +|++|=+.+.+. -..+++.+.|.+++ ++.+|.-.|||. .+...-+.+.+
T Consensus 393 L~e~v~~vkptvLIG~S~~~g--------------~Ft~evi~~Ma~~~-~rPIIFaLSNPt~~~E~~pe~a~~~T 453 (581)
T PLN03129 393 LLEAVKAIKPTVLIGLSGVGG--------------TFTKEVLEAMASLN-ERPIIFALSNPTSKAECTAEEAYTWT 453 (581)
T ss_pred HHHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcC-CCCEEEECCCCCCCcCcCHHHHHHhh
Confidence 8899999 898886644332 24567778888886 889999999997 56666677765
No 391
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.37 E-value=0.01 Score=52.51 Aligned_cols=33 Identities=24% Similarity=0.121 Sum_probs=30.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|++++..|++.|. .|.+.+++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-------~vi~~~r~ 35 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-------RVIATYFS 35 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCC
Confidence 3799999999999999999998886 89999987
No 392
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.35 E-value=0.021 Score=51.16 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+.+.|+||+|.+|.+++..|++.|. +|+++|.+
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~-------~vv~~~~~ 43 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGC-------DIVGINIV 43 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEecCc
Confidence 36799999999999999999999887 88888876
No 393
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.065 Score=49.81 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|++|..++..|++.|. +|++.+++
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~-------~Vil~~R~ 47 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGA-------EVILPVRN 47 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 36899999999999999999999886 89999998
No 394
>KOG0409|consensus
Probab=96.34 E-value=0.0065 Score=55.31 Aligned_cols=68 Identities=18% Similarity=0.378 Sum_probs=52.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+|+-||- |.+|++++..|+..|+ .|++||++ .++.+ ++++.. .++...+.|..+++
T Consensus 35 ~~~iGFIGL-G~MG~~M~~nLik~G~-------kVtV~dr~----~~k~~----~f~~~G------a~v~~sPaeVae~s 92 (327)
T KOG0409|consen 35 KTRIGFIGL-GNMGSAMVSNLIKAGY-------KVTVYDRT----KDKCK----EFQEAG------ARVANSPAEVAEDS 92 (327)
T ss_pred cceeeEEee-ccchHHHHHHHHHcCC-------EEEEEeCc----HHHHH----HHHHhc------hhhhCCHHHHHhhc
Confidence 479999998 9999999999999998 99999999 44333 455432 12334567888999
Q ss_pred cEEEEeCCCC
Q psy9582 85 NIAILIGSFP 94 (329)
Q Consensus 85 DiVi~~~g~~ 94 (329)
|+||...+.|
T Consensus 93 Dvvitmv~~~ 102 (327)
T KOG0409|consen 93 DVVITMVPNP 102 (327)
T ss_pred CEEEEEcCCh
Confidence 9999875543
No 395
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.04 Score=49.11 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=30.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|++|++++..|++.|. +|+++|++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-------~vi~~~r~ 35 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-------DLAINDRP 35 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecC
Confidence 4799999999999999999999887 89999976
No 396
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.30 E-value=0.0096 Score=54.84 Aligned_cols=56 Identities=11% Similarity=0.198 Sum_probs=46.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||.+|.||..++..|...|. +|++++.. .. ++.+..+.|
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~ga-------tVtv~~~~----t~------------------------~l~e~~~~A 203 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHC-------SVTVVHSR----ST------------------------DAKALCRQA 203 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC-------EEEEECCC----CC------------------------CHHHHHhcC
Confidence 57999999977999999999999887 89999876 21 245677899
Q ss_pred cEEEEeCCCCC
Q psy9582 85 NIAILIGSFPR 95 (329)
Q Consensus 85 DiVi~~~g~~~ 95 (329)
|+||.+.|.+.
T Consensus 204 DIVIsavg~~~ 214 (301)
T PRK14194 204 DIVVAAVGRPR 214 (301)
T ss_pred CEEEEecCChh
Confidence 99999877653
No 397
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.053 Score=49.19 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=30.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+.|+||+|.+|.+++..|+..|. +|.+.+++
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~-------~V~~~~r~ 43 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGF-------PVALGARR 43 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 5799999999999999999999887 89999887
No 398
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.28 E-value=0.023 Score=52.57 Aligned_cols=67 Identities=10% Similarity=0.045 Sum_probs=47.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..|++|+|+ |.+|..++..|...|. +|.++|++ .++.+ .+.++ +. ......++.+.++++
T Consensus 152 g~kvlViG~-G~iG~~~a~~L~~~Ga-------~V~v~~r~----~~~~~-~~~~~-----G~--~~~~~~~l~~~l~~a 211 (296)
T PRK08306 152 GSNVLVLGF-GRTGMTLARTLKALGA-------NVTVGARK----SAHLA-RITEM-----GL--SPFHLSELAEEVGKI 211 (296)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC-------EEEEEECC----HHHHH-HHHHc-----CC--eeecHHHHHHHhCCC
Confidence 579999998 9999999999998886 89999998 33222 22111 11 111113456788999
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|+||.+.
T Consensus 212 DiVI~t~ 218 (296)
T PRK08306 212 DIIFNTI 218 (296)
T ss_pred CEEEECC
Confidence 9999974
No 399
>PRK08589 short chain dehydrogenase; Validated
Probab=96.28 E-value=0.087 Score=47.70 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|.+++..|+..|. +|++++++
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~-------~vi~~~r~ 39 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGA-------YVLAVDIA 39 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc
Confidence 46899999999999999999999987 89999987
No 400
>PRK06484 short chain dehydrogenase; Validated
Probab=96.28 E-value=0.013 Score=58.26 Aligned_cols=118 Identities=17% Similarity=0.140 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-------C
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-------N 76 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-------~ 76 (329)
+.+.+.|+||++.+|..++..|++.|. .|.+++++ .++++....++......+..++.-.. .
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 72 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-------QVVVADRN----VERARERADSLGPDHHALAMDVSDEAQIREGFEQ 72 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHH
Confidence 446889999999999999999999987 89999998 44443332222110000000111000 1
Q ss_pred cccccCCccEEEEeCCCCC---CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhcCCCeEEEEEc
Q psy9582 77 PITAFKDANIAILIGSFPR---KS--NME---RSELLAINSSI----FIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 77 ~~~al~~aDiVi~~~g~~~---~~--g~~---~~~~~~~n~~~----~~~i~~~i~~~~~p~a~viv~t 133 (329)
..+.+...|++|+.+|... .+ ..+ ....+..|+.. .+.+.+.+.+. +..+.|++++
T Consensus 73 ~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~~iv~is 140 (520)
T PRK06484 73 LHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQ-GHGAAIVNVA 140 (520)
T ss_pred HHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCCeEEEEC
Confidence 1222356899999988621 11 122 33445556554 44445555442 2333666665
No 401
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.28 E-value=0.01 Score=53.22 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=30.6
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+.+.|+||+ +.+|..++..|++.|. +|++.+++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-------~Vi~~~r~ 42 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-------TVIYTYQN 42 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEecCc
Confidence 34689999997 6999999999999987 89999886
No 402
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.021 Score=50.22 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|.|+||+|.+|..++..|++.|. +|++++++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-------~v~~~~r~ 36 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-------QVIGIARS 36 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 36899999999999999999999886 89999987
No 403
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.27 E-value=0.019 Score=49.59 Aligned_cols=117 Identities=15% Similarity=0.127 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceE-------eec
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVS-------VHE 75 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~-------~~~ 75 (329)
.....|.|+||+.++|..+|..+.+.|. +|.+..++ ++++.+......... ....++. ...
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN-------~VIi~gR~----e~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lve 70 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGN-------TVIICGRN----EERLAEAKAENPEIH-TEVCDVADRDSRRELVE 70 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCC-------EEEEecCc----HHHHHHHHhcCcchh-eeeecccchhhHHHHHH
Confidence 3567899999999999999999999887 89999999 666654321111110 0000110 011
Q ss_pred CcccccCCccEEEEeCCCCCCCCCC-----H---HHHHH----HHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 76 NPITAFKDANIAILIGSFPRKSNME-----R---SELLA----INSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g~~-----~---~~~~~----~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
-+.+...+-+++|..||..+..+.+ . .+-+. .-+.....+.+.+.+. |+|.||++|
T Consensus 71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q--~~a~IInVS 138 (245)
T COG3967 71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ--PEATIINVS 138 (245)
T ss_pred HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC--CCceEEEec
Confidence 1233456779999999987754321 1 11122 2344566677777773 799999997
No 404
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.27 E-value=0.01 Score=54.46 Aligned_cols=75 Identities=9% Similarity=0.088 Sum_probs=50.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..++.|+|| |.+|.+++..|...|.- +|.+++++ .++++..+.++.... . ...+....+..+.+.++
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~~------~i~I~nRt----~~ka~~La~~~~~~~-~-~~~~~~~~~~~~~~~~~ 191 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGVT------DITVINRN----PDKLSRLVDLGVQVG-V-ITRLEGDSGGLAIEKAA 191 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCCC------eEEEEeCC----HHHHHHHHHHhhhcC-c-ceeccchhhhhhcccCC
Confidence 468999999 99999999999988863 79999998 566665544443211 0 00111002233566889
Q ss_pred cEEEEeCC
Q psy9582 85 NIAILIGS 92 (329)
Q Consensus 85 DiVi~~~g 92 (329)
|+||.+..
T Consensus 192 DiVInaTp 199 (282)
T TIGR01809 192 EVLVSTVP 199 (282)
T ss_pred CEEEECCC
Confidence 99999743
No 405
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.27 E-value=0.0093 Score=54.46 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=44.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhC--CCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANG--DLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
++||+|||. |.+|..++..|... +. +|. ++|++ .++.+..+..+. .....++..+.+
T Consensus 6 ~irIGIIG~-G~IG~~~a~~L~~~~~~~-------el~aV~dr~----~~~a~~~a~~~g--------~~~~~~~~eell 65 (271)
T PRK13302 6 ELRVAIAGL-GAIGKAIAQALDRGLPGL-------TLSAVAVRD----PQRHADFIWGLR--------RPPPVVPLDQLA 65 (271)
T ss_pred eeEEEEECc-cHHHHHHHHHHHhcCCCe-------EEEEEECCC----HHHHHHHHHhcC--------CCcccCCHHHHh
Confidence 489999998 99999999988764 33 565 78888 444332221111 011224556667
Q ss_pred CCccEEEEeCC
Q psy9582 82 KDANIAILIGS 92 (329)
Q Consensus 82 ~~aDiVi~~~g 92 (329)
.++|+|+++++
T Consensus 66 ~~~D~Vvi~tp 76 (271)
T PRK13302 66 THADIVVEAAP 76 (271)
T ss_pred cCCCEEEECCC
Confidence 88999999854
No 406
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.021 Score=58.51 Aligned_cols=116 Identities=15% Similarity=0.090 Sum_probs=65.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC---ccceEeecCcccc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL---LVDVSVHENPITA- 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~---~~~i~~~~~~~~a- 80 (329)
.+++.|+||+|++|.+++..|+..|. +|.+++++ .+.++....++....... ..++.-..+..++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~ 439 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-------TVFLVARN----GEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTV 439 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence 35899999999999999999999887 89999998 444443333332211000 0011101111122
Q ss_pred ------cCCccEEEEeCCCCCCCC--------CCHHHHHHHHHHHHH----HHHHHHhhhcCCCeEEEEEc
Q psy9582 81 ------FKDANIAILIGSFPRKSN--------MERSELLAINSSIFI----EQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 81 ------l~~aDiVi~~~g~~~~~g--------~~~~~~~~~n~~~~~----~i~~~i~~~~~p~a~viv~t 133 (329)
+...|++|+.+|...... .+....+..|+.... .+.+.+++. ..+.||++|
T Consensus 440 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~is 508 (657)
T PRK07201 440 KDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER--RFGHVVNVS 508 (657)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCEEEEEC
Confidence 236899999988642111 112234556655443 444445543 345666665
No 407
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.26 E-value=0.021 Score=55.03 Aligned_cols=91 Identities=16% Similarity=0.120 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
...+|+|+|. |.+|..++..+...|. +|..+|.+ ..+.....+ + .+ .. .+..+++++
T Consensus 194 ~Gk~VvViG~-G~IG~~vA~~ak~~Ga-------~ViV~d~d----p~r~~~A~~---~---G~----~v-~~leeal~~ 250 (406)
T TIGR00936 194 AGKTVVVAGY-GWCGKGIAMRARGMGA-------RVIVTEVD----PIRALEAAM---D---GF----RV-MTMEEAAKI 250 (406)
T ss_pred CcCEEEEECC-CHHHHHHHHHHhhCcC-------EEEEEeCC----hhhHHHHHh---c---CC----Ee-CCHHHHHhc
Confidence 3579999999 9999999999998876 89999998 333221111 1 11 11 123568899
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
+|+||.+.|.+ .++.. +.+... ++.+++++++-+
T Consensus 251 aDVVItaTG~~---------------~vI~~--~~~~~m-K~GailiN~G~~ 284 (406)
T TIGR00936 251 GDIFITATGNK---------------DVIRG--EHFENM-KDGAIVANIGHF 284 (406)
T ss_pred CCEEEECCCCH---------------HHHHH--HHHhcC-CCCcEEEEECCC
Confidence 99998875432 22221 122332 477899998754
No 408
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.019 Score=50.25 Aligned_cols=112 Identities=11% Similarity=0.071 Sum_probs=62.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCccc---ccC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPIT---AFK 82 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~---al~ 82 (329)
++.|+||+|.+|++++..|++.|. +|+++|++ .+.++. +....... ..++.-..+..+ .+.
T Consensus 3 ~vlvtG~sg~iG~~la~~L~~~G~-------~v~~~~r~----~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~~ 67 (222)
T PRK06953 3 TVLIVGASRGIGREFVRQYRADGW-------RVIATARD----AAALAA----LQALGAEALALDVADPASVAGLAWKLD 67 (222)
T ss_pred eEEEEcCCCchhHHHHHHHHhCCC-------EEEEEECC----HHHHHH----HHhccceEEEecCCCHHHHHHHHHHhc
Confidence 699999999999999999998886 89999988 333321 11110000 001111111111 122
Q ss_pred --CccEEEEeCCCCC--C-C--CCC---HHHHHHHHHHHHHHHHHHHhhhcC-CCeEEEEEc
Q psy9582 83 --DANIAILIGSFPR--K-S--NME---RSELLAINSSIFIEQGKALNSVAS-RDVKVLVVG 133 (329)
Q Consensus 83 --~aDiVi~~~g~~~--~-~--g~~---~~~~~~~n~~~~~~i~~~i~~~~~-p~a~viv~t 133 (329)
..|+||+++|... . + ..+ ....+..|+.....+.+.+.++.. ..+.+++++
T Consensus 68 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~is 129 (222)
T PRK06953 68 GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLS 129 (222)
T ss_pred CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEc
Confidence 4799999888642 1 1 112 234566777766666665554321 123444444
No 409
>PLN02494 adenosylhomocysteinase
Probab=96.25 E-value=0.02 Score=55.92 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=59.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+|+|+|. |.+|..+|..+...|. +|+.+|++ ..+.. .+.. + .+ .. .+..++++++
T Consensus 254 GKtVvViGy-G~IGr~vA~~aka~Ga-------~VIV~e~d----p~r~~-eA~~--~---G~----~v-v~leEal~~A 310 (477)
T PLN02494 254 GKVAVICGY-GDVGKGCAAAMKAAGA-------RVIVTEID----PICAL-QALM--E---GY----QV-LTLEDVVSEA 310 (477)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----chhhH-HHHh--c---CC----ee-ccHHHHHhhC
Confidence 579999999 9999999999987776 89999998 33221 1111 1 11 11 1345788999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
|+||.+.|... ++. .+.+... ++++++++++-+
T Consensus 311 DVVI~tTGt~~---------------vI~--~e~L~~M-K~GAiLiNvGr~ 343 (477)
T PLN02494 311 DIFVTTTGNKD---------------IIM--VDHMRKM-KNNAIVCNIGHF 343 (477)
T ss_pred CEEEECCCCcc---------------chH--HHHHhcC-CCCCEEEEcCCC
Confidence 99998755421 111 2333433 578999999975
No 410
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.25 E-value=0.0091 Score=57.79 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=53.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.+||.|+|+ |.+|..++..|...|.- +|++++++ .++++..+..+... .+....++.+.+.++
T Consensus 181 ~kkvlviGa-G~~a~~va~~L~~~g~~------~I~V~nRt----~~ra~~La~~~~~~------~~~~~~~l~~~l~~a 243 (414)
T PRK13940 181 SKNVLIIGA-GQTGELLFRHVTALAPK------QIMLANRT----IEKAQKITSAFRNA------SAHYLSELPQLIKKA 243 (414)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCC------EEEEECCC----HHHHHHHHHHhcCC------eEecHHHHHHHhccC
Confidence 479999999 99999999999988763 79999998 55554443333210 111224557889999
Q ss_pred cEEEEeCCCCC
Q psy9582 85 NIAILIGSFPR 95 (329)
Q Consensus 85 DiVi~~~g~~~ 95 (329)
|+||.+.+.|.
T Consensus 244 DiVI~aT~a~~ 254 (414)
T PRK13940 244 DIIIAAVNVLE 254 (414)
T ss_pred CEEEECcCCCC
Confidence 99999866654
No 411
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.25 E-value=0.013 Score=54.81 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=54.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
...++|||+ |..+...+..+..---+. +|++||++ .+..+..+.+++... ...+....+.++++++|
T Consensus 130 a~~laiIGa-G~qA~~ql~a~~~v~~~~-----~I~i~~r~----~~~~e~~a~~l~~~~---~~~v~a~~s~~~av~~a 196 (330)
T COG2423 130 ASTLAIIGA-GAQARTQLEALKAVRDIR-----EIRVYSRD----PEAAEAFAARLRKRG---GEAVGAADSAEEAVEGA 196 (330)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhhCCcc-----EEEEEcCC----HHHHHHHHHHHHhhc---CccceeccCHHHHhhcC
Confidence 467999998 998888777776532233 99999999 666776666666532 22466667789999999
Q ss_pred cEEEEe
Q psy9582 85 NIAILI 90 (329)
Q Consensus 85 DiVi~~ 90 (329)
|+|+.+
T Consensus 197 DiIvt~ 202 (330)
T COG2423 197 DIVVTA 202 (330)
T ss_pred CEEEEe
Confidence 999986
No 412
>PRK12743 oxidoreductase; Provisional
Probab=96.25 E-value=0.099 Score=46.74 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=28.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++.|+||+|.+|.+++..|++.|. +|.+.+..
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~-------~V~~~~~~ 35 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF-------DIGITWHS 35 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 3799999999999999999999987 78887654
No 413
>PLN02928 oxidoreductase family protein
Probab=96.24 E-value=0.015 Score=54.94 Aligned_cols=104 Identities=17% Similarity=0.146 Sum_probs=60.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhccc-CCccceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF-PLLVDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~-~~~~~i~~~~~~~~al~~ 83 (329)
.++|+|+|. |.||+.+|..|..-|. +|..+|+.. .........+..... ..........++.+.++.
T Consensus 159 gktvGIiG~-G~IG~~vA~~l~afG~-------~V~~~dr~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~ 226 (347)
T PLN02928 159 GKTVFILGY-GAIGIELAKRLRPFGV-------KLLATRRSW----TSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGE 226 (347)
T ss_pred CCEEEEECC-CHHHHHHHHHHhhCCC-------EEEEECCCC----ChhhhhhhccccccccccccccCcccCHHHHHhh
Confidence 479999999 9999999999998787 899999861 111100000000000 000000012467889999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
||+|+++.... + .+..++- .+.+... +|++++||++-
T Consensus 227 aDiVvl~lPlt--~---------~T~~li~--~~~l~~M-k~ga~lINvaR 263 (347)
T PLN02928 227 ADIVVLCCTLT--K---------ETAGIVN--DEFLSSM-KKGALLVNIAR 263 (347)
T ss_pred CCEEEECCCCC--h---------HhhcccC--HHHHhcC-CCCeEEEECCC
Confidence 99999974221 1 0111111 2444444 58999999984
No 414
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.24 E-value=0.022 Score=49.99 Aligned_cols=34 Identities=32% Similarity=0.615 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||+|+|+ |.+|+.++..|+..|. + +++++|.+
T Consensus 28 ~~~V~ViG~-GglGs~ia~~La~~Gv-g-----~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGA-GGLGSNIAVALARSGV-G-----NLKLVDFD 61 (212)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 468999998 9999999999999987 3 79999988
No 415
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.23 E-value=0.011 Score=55.54 Aligned_cols=75 Identities=21% Similarity=0.383 Sum_probs=45.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCccccc
Q psy9582 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
|++++||+|+||+|.+|.-+...|.+.++-. .+|+.+-..+ . .|....+.. ..+.+.....+++
T Consensus 1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~----~~l~~v~s~~----~--aG~~l~~~~------~~l~~~~~~~~~~ 64 (336)
T PRK05671 1 MSQPLDIAVVGATGTVGEALVQILEERDFPV----GTLHLLASSE----S--AGHSVPFAG------KNLRVREVDSFDF 64 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhhCCCCc----eEEEEEECcc----c--CCCeeccCC------cceEEeeCChHHh
Confidence 4455899999999999999999999654311 1777775541 1 122112211 1233322222347
Q ss_pred CCccEEEEeCC
Q psy9582 82 KDANIAILIGS 92 (329)
Q Consensus 82 ~~aDiVi~~~g 92 (329)
+++|+||++.+
T Consensus 65 ~~vD~vFla~p 75 (336)
T PRK05671 65 SQVQLAFFAAG 75 (336)
T ss_pred cCCCEEEEcCC
Confidence 89999999743
No 416
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.048 Score=48.97 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=30.4
Q ss_pred CCEEEEEcCCC-chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAG-QIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G-~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+| .+|..++..|+..|. +|.+.|++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-------~V~~~~~~ 51 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA-------RVVISDIH 51 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC-------EEEEEeCC
Confidence 46899999987 799999999999887 89999988
No 417
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.22 E-value=0.019 Score=55.91 Aligned_cols=106 Identities=13% Similarity=0.200 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
...+|+|+|+ |.+|..++..|...|.. +|+++|++ .+++...+.++. . .+....+..+++.+
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~------~V~v~~r~----~~ra~~la~~~g-----~--~~~~~~~~~~~l~~ 242 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVR------KITVANRT----LERAEELAEEFG-----G--EAIPLDELPEALAE 242 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCC------eEEEEeCC----HHHHHHHHHHcC-----C--cEeeHHHHHHHhcc
Confidence 3479999998 99999999999877652 79999998 544443333221 0 11111345677899
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchhhH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTN 139 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~~~ 139 (329)
+|+||.+.+.+..- .+. ..++.. +..-.....+++-+++|-|+=
T Consensus 243 aDvVI~aT~s~~~~-i~~--------~~l~~~---~~~~~~~~~vviDla~Prdid 286 (423)
T PRK00045 243 ADIVISSTGAPHPI-IGK--------GMVERA---LKARRHRPLLLVDLAVPRDIE 286 (423)
T ss_pred CCEEEECCCCCCcE-EcH--------HHHHHH---HhhccCCCeEEEEeCCCCCCc
Confidence 99999986554310 111 111111 111102457888999998764
No 418
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.22 E-value=0.021 Score=50.65 Aligned_cols=31 Identities=23% Similarity=0.214 Sum_probs=27.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEe
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLE 43 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D 43 (329)
+.+.|+||+|.+|..++..|++.|. ++++..
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~-------~vv~~~ 34 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF-------KVVAGC 34 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC-------EEEEEc
Confidence 5789999999999999999999987 777754
No 419
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.21 E-value=0.026 Score=50.66 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|.+|.+++..|+..|. .+++..++
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~-------~vvi~~~~ 40 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKA-------KVVINYRS 40 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 47899999999999999999999886 78887765
No 420
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.21 E-value=0.023 Score=54.88 Aligned_cols=90 Identities=12% Similarity=0.080 Sum_probs=59.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+|+|+|+ |.+|..++..+...|. +|.++|++ +.++. .+..+ .+ .. ....++++++
T Consensus 202 GktVvViG~-G~IG~~va~~ak~~Ga-------~ViV~d~d----~~R~~-~A~~~-----G~----~~-~~~~e~v~~a 258 (413)
T cd00401 202 GKVAVVAGY-GDVGKGCAQSLRGQGA-------RVIVTEVD----PICAL-QAAME-----GY----EV-MTMEEAVKEG 258 (413)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEECC----hhhHH-HHHhc-----CC----EE-ccHHHHHcCC
Confidence 469999999 9999999999998887 78999998 44443 22111 11 11 1234678899
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
|+||.+.|.+ ..+.. ..+... ++.+++++++.+
T Consensus 259 DVVI~atG~~---------------~~i~~--~~l~~m-k~GgilvnvG~~ 291 (413)
T cd00401 259 DIFVTTTGNK---------------DIITG--EHFEQM-KDGAIVCNIGHF 291 (413)
T ss_pred CEEEECCCCH---------------HHHHH--HHHhcC-CCCcEEEEeCCC
Confidence 9999886532 12211 113333 478899999864
No 421
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.20 E-value=0.024 Score=51.67 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=48.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.+++.|+|+ |.+|.+++..|+..+. +|.++|++ .++++..+.++.... .+.........+.++
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~-------~v~v~~R~----~~~~~~la~~~~~~~-----~~~~~~~~~~~~~~~ 179 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADC-------NVIIANRT----VSKAEELAERFQRYG-----EIQAFSMDELPLHRV 179 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHhhcC-----ceEEechhhhcccCc
Confidence 468999999 9999999999998875 89999998 555554444433211 111111112345689
Q ss_pred cEEEEeCCC
Q psy9582 85 NIAILIGSF 93 (329)
Q Consensus 85 DiVi~~~g~ 93 (329)
|+||.+.+.
T Consensus 180 DivInatp~ 188 (270)
T TIGR00507 180 DLIINATSA 188 (270)
T ss_pred cEEEECCCC
Confidence 999998554
No 422
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.20 E-value=0.028 Score=58.06 Aligned_cols=34 Identities=26% Similarity=0.279 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||+|++|.+++..|++.|. +|++.|++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga-------~Vvi~~r~ 447 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA-------HVVLADLN 447 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCC
Confidence 36899999999999999999999887 89999998
No 423
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.13 E-value=0.016 Score=55.55 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
++||+|+||+|.+|..+...|.....+ +|+++..+
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~------el~~l~s~ 72 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDF------EITVMTAD 72 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCC------eEEEEECh
Confidence 469999999999999999999888543 89998775
No 424
>PRK06720 hypothetical protein; Provisional
Probab=96.13 E-value=0.073 Score=44.96 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+.+.|+||+|.+|..++..|.+.|. +|.++|++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-------~V~l~~r~ 49 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-------KVIVTDID 49 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEECC
Confidence 346889999988999999999999886 89999987
No 425
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.13 E-value=0.018 Score=56.29 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..++++|+|. |.+|..+|..+...|. +|..+|++ ..+...... + . +.. .+..++++.
T Consensus 253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga-------~ViV~e~d----p~~a~~A~~---~---G----~~~-~~leell~~ 309 (476)
T PTZ00075 253 AGKTVVVCGY-GDVGKGCAQALRGFGA-------RVVVTEID----PICALQAAM---E---G----YQV-VTLEDVVET 309 (476)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCC----chhHHHHHh---c---C----cee-ccHHHHHhc
Confidence 3579999998 9999999999998887 89999887 332211111 1 1 111 235678999
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
||+|+.+.|.+. ++. .+.+... +|.+++++++-.
T Consensus 310 ADIVI~atGt~~---------------iI~--~e~~~~M-KpGAiLINvGr~ 343 (476)
T PTZ00075 310 ADIFVTATGNKD---------------IIT--LEHMRRM-KNNAIVGNIGHF 343 (476)
T ss_pred CCEEEECCCccc---------------ccC--HHHHhcc-CCCcEEEEcCCC
Confidence 999999754321 111 1334443 588999999855
No 426
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.11 E-value=0.047 Score=51.12 Aligned_cols=94 Identities=18% Similarity=0.240 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-cCcccccCC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-ENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~~~~~al~~ 83 (329)
..+|+|+|+ |.+|..-++.+...+. +|+.+|++ +++++ .+.+|-. ... +..+ .+..+++++
T Consensus 167 G~~V~I~G~-GGlGh~avQ~Aka~ga-------~Via~~~~----~~K~e-~a~~lGA---d~~--i~~~~~~~~~~~~~ 228 (339)
T COG1064 167 GKWVAVVGA-GGLGHMAVQYAKAMGA-------EVIAITRS----EEKLE-LAKKLGA---DHV--INSSDSDALEAVKE 228 (339)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC-------eEEEEeCC----hHHHH-HHHHhCC---cEE--EEcCCchhhHHhHh
Confidence 479999999 8888776666665674 99999999 55544 3333321 110 1111 223344443
Q ss_pred -ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch
Q psy9582 84 -ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV 136 (329)
Q Consensus 84 -aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~ 136 (329)
+|+||.+++ +. -+....+.+ ++++.++.+++|-
T Consensus 229 ~~d~ii~tv~-~~---------------~~~~~l~~l----~~~G~~v~vG~~~ 262 (339)
T COG1064 229 IADAIIDTVG-PA---------------TLEPSLKAL----RRGGTLVLVGLPG 262 (339)
T ss_pred hCcEEEECCC-hh---------------hHHHHHHHH----hcCCEEEEECCCC
Confidence 999999865 22 223333333 3678999999994
No 427
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=96.10 E-value=0.014 Score=57.74 Aligned_cols=123 Identities=12% Similarity=0.101 Sum_probs=76.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHh----CCCCCCCC-CceEEEEecCC--cccc-cchhhhHhhhhhcccCCccceEeecCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIAN----GDLLGKDQ-PIILQLLEASN--KKSQ-KAIKGVIMEIEDCIFPLLVDVSVHENP 77 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~----~~~~~~~~-~~ei~L~D~~~--~~~~-~~~~~~~~dl~~~~~~~~~~i~~~~~~ 77 (329)
.||.+.|| |..|..+|..|+. .|+- .++ .-.++++|.+- -+.. +.+......+.+.. ....-....++
T Consensus 298 ~riv~~GA-GsAgiGia~ll~~~m~~~Gls-~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~--~~~~~~~~~~L 373 (559)
T PTZ00317 298 QRIVFFGA-GSAAIGVANNIADLAAEYGVT-REEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTD--ISAEDSSLKTL 373 (559)
T ss_pred cEEEEECC-CHHHHHHHHHHHHHHHHcCCC-hhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccc--cccccccCCCH
Confidence 69999999 9999999988874 5652 111 12899999861 0000 11111111221110 00000012578
Q ss_pred ccccCCc--cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCch---hhHHHHHHHHC
Q psy9582 78 ITAFKDA--NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPV---NTNTYITMKSA 147 (329)
Q Consensus 78 ~~al~~a--DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~---~~~~~~~~~~~ 147 (329)
.++++++ |++|=+.+.+. -..+++.+.|.+++ ++.+|.-.|||. .+...-+.+.+
T Consensus 374 ~e~v~~~KPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~-~rPIIFaLSNPt~~aE~tpeda~~~T 433 (559)
T PTZ00317 374 EDVVRFVKPTALLGLSGVGG--------------VFTEEVVKTMASNV-ERPIIFPLSNPTSKAECTAEDAYKWT 433 (559)
T ss_pred HHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcC-CCCEEEECCCCCCCCCcCHHHHHhhc
Confidence 8999999 98886544332 25567888888887 889999999997 56666677765
No 428
>PLN00203 glutamyl-tRNA reductase
Probab=96.10 E-value=0.011 Score=58.72 Aligned_cols=74 Identities=14% Similarity=0.239 Sum_probs=50.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+|+|||+ |.+|..++..|...|.- +|++++++ .+++......+.. ....+....+..+++.++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~------~V~V~nRs----~era~~La~~~~g----~~i~~~~~~dl~~al~~a 330 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCT------KMVVVNRS----EERVAALREEFPD----VEIIYKPLDEMLACAAEA 330 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCC------eEEEEeCC----HHHHHHHHHHhCC----CceEeecHhhHHHHHhcC
Confidence 479999999 99999999999987752 79999998 5555443322211 000111223556789999
Q ss_pred cEEEEeCCC
Q psy9582 85 NIAILIGSF 93 (329)
Q Consensus 85 DiVi~~~g~ 93 (329)
|+||.+.+.
T Consensus 331 DVVIsAT~s 339 (519)
T PLN00203 331 DVVFTSTSS 339 (519)
T ss_pred CEEEEccCC
Confidence 999987443
No 429
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.09 E-value=0.019 Score=53.79 Aligned_cols=92 Identities=16% Similarity=0.178 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++++|||. |.||+.++..+..-|. +|..||.... ++ .. ..+ .+....++.+-++.|
T Consensus 142 gkTvGIiG~-G~IG~~va~~l~afgm-------~v~~~d~~~~--~~-~~-----~~~-------~~~~~~~Ld~lL~~s 198 (324)
T COG0111 142 GKTVGIIGL-GRIGRAVAKRLKAFGM-------KVIGYDPYSP--RE-RA-----GVD-------GVVGVDSLDELLAEA 198 (324)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-------eEEEECCCCc--hh-hh-----ccc-------cceecccHHHHHhhC
Confidence 479999999 9999999999999888 8999999510 11 11 001 122224578899999
Q ss_pred cEEEEeCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGS-FPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g-~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|||++..- ++...|+ -| ++.+.+. ++.+++||++-
T Consensus 199 Div~lh~PlT~eT~g~-------i~-------~~~~a~M-K~gailIN~aR 234 (324)
T COG0111 199 DILTLHLPLTPETRGL-------IN-------AEELAKM-KPGAILINAAR 234 (324)
T ss_pred CEEEEcCCCCcchhcc-------cC-------HHHHhhC-CCCeEEEECCC
Confidence 99998632 2221111 01 1333443 57889999873
No 430
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.08 E-value=0.026 Score=54.71 Aligned_cols=91 Identities=11% Similarity=0.110 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
...+|+|+|. |.+|..++..+...|. +|.++|++ ..++.....+ ++ .. .+..+++++
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga-------~ViV~d~d----p~ra~~A~~~------G~----~v-~~l~eal~~ 267 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA-------RVIVTEVD----PICALQAAMD------GF----RV-MTMEEAAEL 267 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEcCC----chhhHHHHhc------CC----Ee-cCHHHHHhC
Confidence 3478999998 9999999999998887 89999998 3333211111 11 11 134678899
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
+|+||.+.|.+ .++.. +.+... ++.+++++++-+
T Consensus 268 aDVVI~aTG~~---------------~vI~~--~~~~~m-K~GailiNvG~~ 301 (425)
T PRK05476 268 GDIFVTATGNK---------------DVITA--EHMEAM-KDGAILANIGHF 301 (425)
T ss_pred CCEEEECCCCH---------------HHHHH--HHHhcC-CCCCEEEEcCCC
Confidence 99999875431 12221 223333 477899998754
No 431
>PLN02996 fatty acyl-CoA reductase
Probab=96.07 E-value=0.11 Score=51.58 Aligned_cols=112 Identities=14% Similarity=0.117 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhC-CCCCCCCCceEEEEecCCcc--cccchhhhH--hhhh----hcccC-C----ccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANG-DLLGKDQPIILQLLEASNKK--SQKAIKGVI--MEIE----DCIFP-L----LVD 70 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~--~~~~~~~~~--~dl~----~~~~~-~----~~~ 70 (329)
.+.|.|+||+|++|++++..|+.. .-.+ +|+++.+..+. ..+++.... .++. +.... + ..+
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~-----~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~k 85 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEK 85 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCC-----EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcC
Confidence 478999999999999999988764 3333 78888876311 011111010 0110 00000 0 011
Q ss_pred eEe-ecC-------------cccccCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q psy9582 71 VSV-HEN-------------PITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSV 122 (329)
Q Consensus 71 i~~-~~~-------------~~~al~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~ 122 (329)
+.. ..| ..+.++++|+||++|+... ...+.......|+....++.+.+.+.
T Consensus 86 v~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 86 VTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred EEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 111 2345678999999987543 22345566788999999999888764
No 432
>PLN00016 RNA-binding protein; Provisional
Probab=96.07 E-value=0.042 Score=52.49 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=31.5
Q ss_pred CCEEEEE----cCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISIT----GAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~Ii----Ga~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
++||.|+ ||+|++|++++..|++.|+ +|++++++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-------~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-------EVTLFTRG 89 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-------EEEEEecC
Confidence 4689999 9999999999999999987 89999998
No 433
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=96.07 E-value=0.03 Score=46.84 Aligned_cols=78 Identities=13% Similarity=0.129 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhh-hcccCCccceEeecCccccc
Q psy9582 4 KPVRISITGA-AGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE-DCIFPLLVDVSVHENPITAF 81 (329)
Q Consensus 4 ~~~kI~IiGa-~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~-~~~~~~~~~i~~~~~~~~al 81 (329)
+..||+++|= .+++..+++..+..-|. +++++-... ..-.......+.. +........++++.+..+++
T Consensus 1 ~gl~i~~vGD~~~rv~~Sl~~~~~~~g~-------~~~~~~P~~--~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~e~l 71 (158)
T PF00185_consen 1 KGLKIAYVGDGHNRVAHSLIELLAKFGM-------EVVLIAPEG--LRYPPDPEVLEKAKKNAKKNGGKITITDDIEEAL 71 (158)
T ss_dssp TTEEEEEESSTTSHHHHHHHHHHHHTTS-------EEEEESSGG--GGGSHHHHHHHHHHHHHHHHTTEEEEESSHHHHH
T ss_pred CCCEEEEECCCCChHHHHHHHHHHHcCC-------EEEEECCCc--ccCCCCHHHHHHHHHHHHHhCCCeEEEeCHHHhc
Confidence 3579999995 47999999999998887 888887761 0000111112111 11101124688888988999
Q ss_pred CCccEEEEe
Q psy9582 82 KDANIAILI 90 (329)
Q Consensus 82 ~~aDiVi~~ 90 (329)
++||+|+..
T Consensus 72 ~~aDvvy~~ 80 (158)
T PF00185_consen 72 KGADVVYTD 80 (158)
T ss_dssp TT-SEEEEE
T ss_pred CCCCEEEEc
Confidence 999999886
No 434
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.07 E-value=0.0032 Score=60.41 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=45.7
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee--cCcccccCCcc
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH--ENPITAFKDAN 85 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~--~~~~~al~~aD 85 (329)
|.|+|| |.+|+.++..|++..-.. +|++.|++ .++++.....+....... ..+.+. .++.+.++++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~-----~v~va~r~----~~~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFE-----EVTVADRN----PEKAERLAEKLLGDRVEA-VQVDVNDPESLAELLRGCD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE------EEEEEESS----HHHHHHHHT--TTTTEEE-EE--TTTHHHHHHHHTTSS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCC-----cEEEEECC----HHHHHHHHhhccccceeE-EEEecCCHHHHHHHHhcCC
Confidence 789999 999999999999886543 79999999 666554433221110000 111111 12456799999
Q ss_pred EEEEeCCC
Q psy9582 86 IAILIGSF 93 (329)
Q Consensus 86 iVi~~~g~ 93 (329)
+||.+++.
T Consensus 70 vVin~~gp 77 (386)
T PF03435_consen 70 VVINCAGP 77 (386)
T ss_dssp EEEE-SSG
T ss_pred EEEECCcc
Confidence 99998764
No 435
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.06 E-value=0.046 Score=44.62 Aligned_cols=32 Identities=25% Similarity=0.586 Sum_probs=29.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||+|+|+ |.+|+.++..|+..|. + +++++|.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv-~-----~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV-G-----KITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-C-----EEEEEcCC
Confidence 6899998 9999999999999987 3 89999987
No 436
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.06 E-value=0.024 Score=52.55 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=59.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|- |.||+.+|..+...|. +|..||+. ... .+ .. . ...++.+.++.|
T Consensus 122 gktvgIiG~-G~IG~~vA~~l~afG~-------~V~~~~r~----~~~-~~----~~----~------~~~~l~ell~~a 174 (303)
T PRK06436 122 NKSLGILGY-GGIGRRVALLAKAFGM-------NIYAYTRS----YVN-DG----IS----S------IYMEPEDIMKKS 174 (303)
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCC----Ccc-cC----cc----c------ccCCHHHHHhhC
Confidence 479999998 9999999987776676 89999987 211 10 00 0 013567889999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc--Cchh
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG--NPVN 137 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t--NP~~ 137 (329)
|+|+++..... . ++ .++- .+.+... +|++++|+++ .++|
T Consensus 175 Div~~~lp~t~--~-T~--------~li~--~~~l~~m-k~ga~lIN~sRG~~vd 215 (303)
T PRK06436 175 DFVLISLPLTD--E-TR--------GMIN--SKMLSLF-RKGLAIINVARADVVD 215 (303)
T ss_pred CEEEECCCCCc--h-hh--------cCcC--HHHHhcC-CCCeEEEECCCccccC
Confidence 99999733211 0 11 1110 2344443 5889999997 4454
No 437
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.03 Score=49.60 Aligned_cols=33 Identities=24% Similarity=0.156 Sum_probs=28.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..+.|+||+|.+|++++..|+..|. .+++.+.+
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~-------~vv~~~~~ 35 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGY-------AVCLNYLR 35 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------eEEEecCC
Confidence 3699999999999999999999886 77777754
No 438
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.04 E-value=0.046 Score=45.62 Aligned_cols=64 Identities=19% Similarity=0.230 Sum_probs=40.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||- |+-|.+.|..|...|+ +|.+-.+....+.++++ .+ . +++ .+..|+.+.|
T Consensus 4 ~k~IAViGy-GsQG~a~AlNLrDSG~-------~V~Vglr~~s~s~~~A~------~~---G----f~v-~~~~eAv~~a 61 (165)
T PF07991_consen 4 GKTIAVIGY-GSQGHAHALNLRDSGV-------NVIVGLREGSASWEKAK------AD---G----FEV-MSVAEAVKKA 61 (165)
T ss_dssp TSEEEEES--SHHHHHHHHHHHHCC--------EEEEEE-TTCHHHHHHH------HT---T-----EC-CEHHHHHHC-
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCC-------CEEEEecCCCcCHHHHH------HC---C----Cee-ccHHHHHhhC
Confidence 579999999 9999999999999998 88877776211111111 11 1 222 2457899999
Q ss_pred cEEEEe
Q psy9582 85 NIAILI 90 (329)
Q Consensus 85 DiVi~~ 90 (329)
|+|+++
T Consensus 62 DvV~~L 67 (165)
T PF07991_consen 62 DVVMLL 67 (165)
T ss_dssp SEEEE-
T ss_pred CEEEEe
Confidence 999997
No 439
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.04 E-value=0.016 Score=49.01 Aligned_cols=54 Identities=17% Similarity=0.255 Sum_probs=42.6
Q ss_pred CCEEEEEcCCCc-hHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 5 PVRISITGAAGQ-IGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 5 ~~kI~IiGa~G~-vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..||.|+|+ |. +|..++..|...+. +|++.+++ . .++.+.+++
T Consensus 44 gk~vlViG~-G~~~G~~~a~~L~~~g~-------~V~v~~r~----~------------------------~~l~~~l~~ 87 (168)
T cd01080 44 GKKVVVVGR-SNIVGKPLAALLLNRNA-------TVTVCHSK----T------------------------KNLKEHTKQ 87 (168)
T ss_pred CCEEEEECC-cHHHHHHHHHHHhhCCC-------EEEEEECC----c------------------------hhHHHHHhh
Confidence 479999999 86 58889999998876 78888876 2 134567889
Q ss_pred ccEEEEeCCCC
Q psy9582 84 ANIAILIGSFP 94 (329)
Q Consensus 84 aDiVi~~~g~~ 94 (329)
||+||.+.+.|
T Consensus 88 aDiVIsat~~~ 98 (168)
T cd01080 88 ADIVIVAVGKP 98 (168)
T ss_pred CCEEEEcCCCC
Confidence 99999886654
No 440
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.04 E-value=0.026 Score=49.73 Aligned_cols=76 Identities=13% Similarity=0.161 Sum_probs=43.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccc--cchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQ--KAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~--~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
|++.|+||+|++|.+++..|++.+.- ..+.+.+++..... .++.....|+.+.. .+ ....+.+..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~-----~~---~~~~~~~~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPD-----ATVHATYRHHKPDFQHDNVQWHALDVTDEA-----EI---KQLSEQFTQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCC-----CEEEEEccCCccccccCceEEEEecCCCHH-----HH---HHHHHhcCC
Confidence 47999999999999999999987431 15666666521100 00001112222110 00 012345678
Q ss_pred ccEEEEeCCCC
Q psy9582 84 ANIAILIGSFP 94 (329)
Q Consensus 84 aDiVi~~~g~~ 94 (329)
.|++|+++|..
T Consensus 68 id~li~~aG~~ 78 (235)
T PRK09009 68 LDWLINCVGML 78 (235)
T ss_pred CCEEEECCccc
Confidence 89999998865
No 441
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.03 E-value=0.025 Score=55.34 Aligned_cols=117 Identities=18% Similarity=0.196 Sum_probs=67.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--C------
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--N------ 76 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~------ 76 (329)
..++.|+||+|.+|..++..|+..|. +|+++|+.. ..+.+.....++.. .. ..+.++. +
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga-------~vi~~~~~~--~~~~l~~~~~~~~~---~~-~~~Dv~~~~~~~~~~~ 276 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA-------HVVCLDVPA--AGEALAAVANRVGG---TA-LALDITAPDAPARIAE 276 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCc--cHHHHHHHHHHcCC---eE-EEEeCCCHHHHHHHHH
Confidence 36899999999999999999999887 899998851 12222222111110 00 0111111 0
Q ss_pred -cccccCCccEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh--hcCCCeEEEEEcC
Q psy9582 77 -PITAFKDANIAILIGSFPRKS---NME---RSELLAINSSIFIEQGKALNS--VASRDVKVLVVGN 134 (329)
Q Consensus 77 -~~~al~~aDiVi~~~g~~~~~---g~~---~~~~~~~n~~~~~~i~~~i~~--~~~p~a~viv~tN 134 (329)
..+.....|+||+++|..... ..+ ....+..|+.....+.+.+.+ ...+.+.|+++|-
T Consensus 277 ~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 277 HLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred HHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 011123579999998865321 122 334556777777777766655 2224466777663
No 442
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.03 E-value=0.019 Score=50.77 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=56.0
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccccCCccE
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITAFKDANI 86 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~al~~aDi 86 (329)
|+|+||+|.+|++++..|++.+. +|+++=++ ... .....+++..... ..++.-...+.++++|+|.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-------~V~~l~R~----~~~--~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-------SVRALVRD----PSS--DRAQQLQALGAEVVEADYDDPESLVAALKGVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-------CEEEEESS----SHH--HHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-------CcEEEEec----cch--hhhhhhhcccceEeecccCCHHHHHHHHcCCce
Confidence 79999999999999999999765 78888887 211 1122233221110 0111112345778999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582 87 AILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123 (329)
Q Consensus 87 Vi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~ 123 (329)
||++.+... ... .+....+++..++..
T Consensus 68 v~~~~~~~~---~~~-------~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 68 VFSVTPPSH---PSE-------LEQQKNLIDAAKAAG 94 (233)
T ss_dssp EEEESSCSC---CCH-------HHHHHHHHHHHHHHT
T ss_pred EEeecCcch---hhh-------hhhhhhHHHhhhccc
Confidence 998755332 111 234555666666653
No 443
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.048 Score=50.60 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=32.8
Q ss_pred CCCC--CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKK--PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||.+ .+.+.|+||++.+|.+++..|+..|. .|++.+++
T Consensus 2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~-------~Vv~~~r~ 41 (305)
T PRK08303 2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGA-------TVYVTGRS 41 (305)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence 5543 46889999999999999999999887 89999987
No 444
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.01 E-value=0.043 Score=47.82 Aligned_cols=34 Identities=21% Similarity=0.449 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||.|+|+ |.+|+.++..|+..|. + +|+++|.+
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv-~-----~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGV-G-----TIVIVDDD 54 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC-C-----eEEEecCC
Confidence 479999998 9999999999999986 3 89999987
No 445
>PRK06046 alanine dehydrogenase; Validated
Probab=96.00 E-value=0.022 Score=53.46 Aligned_cols=74 Identities=15% Similarity=0.212 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
...+|+|||+ |..|...+..+....-+. ++.++|++ .++++..+.++.+. +...+....+..+++.
T Consensus 128 ~~~~vgiiG~-G~qa~~h~~al~~~~~i~-----~v~v~~r~----~~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~- 193 (326)
T PRK06046 128 DSKVVGIIGA-GNQARTQLLALSEVFDLE-----EVRVYDRT----KSSAEKFVERMSSV---VGCDVTVAEDIEEACD- 193 (326)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhhCCce-----EEEEECCC----HHHHHHHHHHHHhh---cCceEEEeCCHHHHhh-
Confidence 3578999998 999999888787543344 89999999 55565555445432 1123555566677776
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
+|+|+++.
T Consensus 194 aDiVv~aT 201 (326)
T PRK06046 194 CDILVTTT 201 (326)
T ss_pred CCEEEEec
Confidence 99999873
No 446
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.97 E-value=0.027 Score=50.68 Aligned_cols=34 Identities=15% Similarity=0.020 Sum_probs=29.5
Q ss_pred CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+.+.|+||+ +.+|..++..|++.|. +|++.|++
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~-------~v~l~~r~ 45 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGA-------ELAVTYLN 45 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCC
Confidence 4678899996 3899999999999887 89999987
No 447
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.97 E-value=0.026 Score=49.14 Aligned_cols=33 Identities=15% Similarity=0.388 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.++|+|+|. |++|++++..|...|. +|+++|++
T Consensus 28 gk~v~I~G~-G~vG~~~A~~L~~~G~-------~Vvv~D~~ 60 (200)
T cd01075 28 GKTVAVQGL-GKVGYKLAEHLLEEGA-------KLIVADIN 60 (200)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEcCC
Confidence 478999999 9999999999999987 89999998
No 448
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.95 E-value=0.06 Score=48.92 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 4 KPVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+.+.+.|+||++ .+|.++|..|++.|. .|++.+++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-------~V~~~~r~ 42 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-------ELAFTYQG 42 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-------EEEEecCc
Confidence 446799999965 899999999999987 89999876
No 449
>PLN02858 fructose-bisphosphate aldolase
Probab=95.94 E-value=0.035 Score=61.47 Aligned_cols=66 Identities=14% Similarity=0.281 Sum_probs=49.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|++||. |.||.+++..|+..|. +|..||++ .++++. +.+.. .....+..+++++|
T Consensus 324 ~~~IGfIGl-G~MG~~mA~~L~~~G~-------~V~v~dr~----~~~~~~----l~~~G------a~~~~s~~e~~~~a 381 (1378)
T PLN02858 324 VKRIGFIGL-GAMGFGMASHLLKSNF-------SVCGYDVY----KPTLVR----FENAG------GLAGNSPAEVAKDV 381 (1378)
T ss_pred CCeEEEECc-hHHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHH----HHHcC------CeecCCHHHHHhcC
Confidence 379999998 9999999999999987 89999998 444332 22211 11234556788999
Q ss_pred cEEEEeCC
Q psy9582 85 NIAILIGS 92 (329)
Q Consensus 85 DiVi~~~g 92 (329)
|+||++..
T Consensus 382 DvVi~~V~ 389 (1378)
T PLN02858 382 DVLVIMVA 389 (1378)
T ss_pred CEEEEecC
Confidence 99999743
No 450
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.94 E-value=0.07 Score=44.56 Aligned_cols=65 Identities=15% Similarity=0.189 Sum_probs=42.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..+|.|+|| |.+|...+..|+..|. +|++++.. ..+ ...++... .+....-..+.++++
T Consensus 13 ~~~vlVvGG-G~va~rka~~Ll~~ga-------~V~VIsp~------~~~-~l~~l~~i------~~~~~~~~~~dl~~a 71 (157)
T PRK06719 13 NKVVVIIGG-GKIAYRKASGLKDTGA-------FVTVVSPE------ICK-EMKELPYI------TWKQKTFSNDDIKDA 71 (157)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEEcCc------cCH-HHHhccCc------EEEecccChhcCCCc
Confidence 479999999 9999999999999887 89999654 111 11122110 111111124568999
Q ss_pred cEEEEe
Q psy9582 85 NIAILI 90 (329)
Q Consensus 85 DiVi~~ 90 (329)
|+||.+
T Consensus 72 ~lViaa 77 (157)
T PRK06719 72 HLIYAA 77 (157)
T ss_pred eEEEEC
Confidence 999986
No 451
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.91 E-value=0.028 Score=49.86 Aligned_cols=34 Identities=26% Similarity=0.446 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||+|+|+ |.+|+.++..|+..|. + +++|+|.+
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gv-g-----~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGV-G-----KLGLVDDD 54 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-C-----EEEEEcCC
Confidence 369999998 9999999999999987 3 89999977
No 452
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=95.89 E-value=0.026 Score=53.98 Aligned_cols=60 Identities=8% Similarity=0.131 Sum_probs=44.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||. |+||+.++..+...|. +|..+|.. ..... .. .. ..++.+.+++|
T Consensus 116 gktvGIIG~-G~IG~~va~~l~a~G~-------~V~~~Dp~----~~~~~-------~~-------~~-~~~l~ell~~a 168 (381)
T PRK00257 116 ERTYGVVGA-GHVGGRLVRVLRGLGW-------KVLVCDPP----RQEAE-------GD-------GD-FVSLERILEEC 168 (381)
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEECCc----ccccc-------cC-------cc-ccCHHHHHhhC
Confidence 478999999 9999999999998887 89999986 21111 00 00 12467788999
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|+|++..
T Consensus 169 DiV~lh~ 175 (381)
T PRK00257 169 DVISLHT 175 (381)
T ss_pred CEEEEeC
Confidence 9999863
No 453
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.89 E-value=0.03 Score=52.78 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||+|||+ |.+|++++..|+..|+ + +|+|+|.+
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGv-g-----~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGI-G-----KLTIADRD 57 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-C-----EEEEEcCC
Confidence 368999999 9999999999999986 3 89999987
No 454
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.89 E-value=0.12 Score=45.51 Aligned_cols=31 Identities=26% Similarity=0.264 Sum_probs=27.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEec
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEA 44 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~ 44 (329)
.+.|+||+|.+|..++..|+..|. ++++..+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r 32 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY-------RVAANCG 32 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC-------EEEEEeC
Confidence 578999999999999999999887 7888877
No 455
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.87 E-value=0.024 Score=52.67 Aligned_cols=117 Identities=10% Similarity=0.054 Sum_probs=64.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCC-CCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC--c-cceEeec------
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGD-LLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL--L-VDVSVHE------ 75 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~--~-~~i~~~~------ 75 (329)
+.+.|+||++.+|.+++..|+..| . .|++.+++ .++++....++....... . .++.-..
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~-------~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 72 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEW-------HVIMACRD----FLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFV 72 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCC-------EEEEEeCC----HHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHH
Confidence 479999999999999999999988 6 89999988 343332222232110000 0 0110000
Q ss_pred -CcccccCCccEEEEeCCCCCC----CCCCH---HHHHHHHHH----HHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 76 -NPITAFKDANIAILIGSFPRK----SNMER---SELLAINSS----IFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 76 -~~~~al~~aDiVi~~~g~~~~----~g~~~---~~~~~~n~~----~~~~i~~~i~~~~~p~a~viv~t 133 (329)
...+.....|++|..+|.... +..+. ...+..|.. .++.+.+.+.+.....+.||++|
T Consensus 73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vs 142 (314)
T TIGR01289 73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVG 142 (314)
T ss_pred HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence 111123568999999886321 11222 233455554 45556666665421135666654
No 456
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.85 E-value=0.019 Score=55.09 Aligned_cols=73 Identities=15% Similarity=0.280 Sum_probs=55.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
..|+.|||| |-||.-.+..|...|.. +|++.++. .++++..+..+. ..+.--.++.+.+.++
T Consensus 178 ~~~vlvIGA-Gem~~lva~~L~~~g~~------~i~IaNRT----~erA~~La~~~~-------~~~~~l~el~~~l~~~ 239 (414)
T COG0373 178 DKKVLVIGA-GEMGELVAKHLAEKGVK------KITIANRT----LERAEELAKKLG-------AEAVALEELLEALAEA 239 (414)
T ss_pred cCeEEEEcc-cHHHHHHHHHHHhCCCC------EEEEEcCC----HHHHHHHHHHhC-------CeeecHHHHHHhhhhC
Confidence 468999999 99999999999999874 89999998 666655554443 1122224567899999
Q ss_pred cEEEEeCCCCC
Q psy9582 85 NIAILIGSFPR 95 (329)
Q Consensus 85 DiVi~~~g~~~ 95 (329)
|+||.+.+.|.
T Consensus 240 DvVissTsa~~ 250 (414)
T COG0373 240 DVVISSTSAPH 250 (414)
T ss_pred CEEEEecCCCc
Confidence 99999866554
No 457
>PLN02306 hydroxypyruvate reductase
Probab=95.83 E-value=0.041 Score=52.82 Aligned_cols=105 Identities=10% Similarity=0.104 Sum_probs=59.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHH-hCCCCCCCCCceEEEEecCCcccccchhhhHhhhhh---cccCCccceEeecCcccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIA-NGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED---CIFPLLVDVSVHENPITA 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~---~~~~~~~~i~~~~~~~~a 80 (329)
.++|+|+|. |.||+.+|..+. .-|. +|..||... ............. ........+....++.+.
T Consensus 165 gktvGIiG~-G~IG~~vA~~l~~~fGm-------~V~~~d~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~el 233 (386)
T PLN02306 165 GQTVGVIGA-GRIGSAYARMMVEGFKM-------NLIYYDLYQ---STRLEKFVTAYGQFLKANGEQPVTWKRASSMEEV 233 (386)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCC-------EEEEECCCC---chhhhhhhhhhcccccccccccccccccCCHHHH
Confidence 479999999 999999999885 4565 899999872 1111100000000 000000112223467889
Q ss_pred cCCccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 81 FKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 81 l~~aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
++.||+|++...... .++ .++- .+.++.. +|++++||++-
T Consensus 234 l~~sDiV~lh~Plt~---~T~--------~lin--~~~l~~M-K~ga~lIN~aR 273 (386)
T PLN02306 234 LREADVISLHPVLDK---TTY--------HLIN--KERLALM-KKEAVLVNASR 273 (386)
T ss_pred HhhCCEEEEeCCCCh---hhh--------hhcC--HHHHHhC-CCCeEEEECCC
Confidence 999999998632211 011 1111 1334443 58999999983
No 458
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.83 E-value=0.023 Score=51.46 Aligned_cols=65 Identities=18% Similarity=0.411 Sum_probs=42.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
+||+|+|++|.||+.++..+...+-+ +|+ ++|.+ .++.... . . ..+..+++..+.++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~------elvav~d~~----~~~~~~~----~----~--~~i~~~~dl~~ll~~~ 61 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDL------ELVAAVDRP----GSPLVGQ----G----A--LGVAITDDLEAVLADA 61 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecC----Ccccccc----C----C--CCccccCCHHHhccCC
Confidence 68999998899999999888764322 444 58877 3322211 1 1 1233456666677789
Q ss_pred cEEEEe
Q psy9582 85 NIAILI 90 (329)
Q Consensus 85 DiVi~~ 90 (329)
|+||.+
T Consensus 62 DvVid~ 67 (257)
T PRK00048 62 DVLIDF 67 (257)
T ss_pred CEEEEC
Confidence 999865
No 459
>PRK13529 malate dehydrogenase; Provisional
Probab=95.82 E-value=0.017 Score=57.28 Aligned_cols=125 Identities=14% Similarity=0.122 Sum_probs=76.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHh----CCCCCCCC-CceEEEEecCC--cccccchhhhHhhhhhcccCCc-cc-eEeecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIAN----GDLLGKDQ-PIILQLLEASN--KKSQKAIKGVIMEIEDCIFPLL-VD-VSVHEN 76 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~----~~~~~~~~-~~ei~L~D~~~--~~~~~~~~~~~~dl~~~~~~~~-~~-i~~~~~ 76 (329)
.||.+.|| |..|..+|..|+. .|+- .++ .-.++++|.+- .+....+......+.+...+.. +. -....+
T Consensus 296 ~riv~~GA-GsAgiGia~ll~~~~~~~Gl~-~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~ 373 (563)
T PRK13529 296 QRIVFLGA-GSAGCGIADQIVAAMVREGLS-EEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVIS 373 (563)
T ss_pred cEEEEECC-CHHHHHHHHHHHHHHHHcCCC-hhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCC
Confidence 69999999 9999999998876 4652 111 12899999871 0001112222222221110100 00 012246
Q ss_pred cccccCCc--cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcCchh---hHHHHHHHHC
Q psy9582 77 PITAFKDA--NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVN---TNTYITMKSA 147 (329)
Q Consensus 77 ~~~al~~a--DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tNP~~---~~~~~~~~~~ 147 (329)
+.++++++ |++|=+.+.+. -..+++.+.|.+++ ++.+|.-.|||.. +...-+.+.+
T Consensus 374 L~e~v~~~kPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~-erPIIFaLSNPt~~aE~tpe~a~~~T 434 (563)
T PRK13529 374 LLEVVRNVKPTVLIGVSGQPG--------------AFTEEIVKEMAAHC-ERPIIFPLSNPTSRAEATPEDLIAWT 434 (563)
T ss_pred HHHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcC-CCCEEEECCCcCCCcccCHHHHHHhh
Confidence 78999998 98876544332 25567788888887 8889999999974 5556666665
No 460
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.81 E-value=0.029 Score=46.95 Aligned_cols=56 Identities=13% Similarity=0.218 Sum_probs=41.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++++|||.|..+|..++..|...+. .|.+.+.+ . .++.+.++.|
T Consensus 36 Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt~~h~~----T------------------------~~l~~~~~~A 80 (160)
T PF02882_consen 36 GKKVVVVGRSNIVGKPLAMLLLNKGA-------TVTICHSK----T------------------------KNLQEITRRA 80 (160)
T ss_dssp T-EEEEE-TTTTTHHHHHHHHHHTT--------EEEEE-TT----S------------------------SSHHHHHTTS
T ss_pred CCEEEEECCcCCCChHHHHHHHhCCC-------eEEeccCC----C------------------------Ccccceeeec
Confidence 47999999988999999999999876 88888776 2 1234566899
Q ss_pred cEEEEeCCCCC
Q psy9582 85 NIAILIGSFPR 95 (329)
Q Consensus 85 DiVi~~~g~~~ 95 (329)
|+||.+.|.|.
T Consensus 81 DIVVsa~G~~~ 91 (160)
T PF02882_consen 81 DIVVSAVGKPN 91 (160)
T ss_dssp SEEEE-SSSTT
T ss_pred cEEeeeecccc
Confidence 99999988764
No 461
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=95.81 E-value=0.023 Score=54.26 Aligned_cols=60 Identities=17% Similarity=0.250 Sum_probs=44.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||. |+||+.+|..|..-|. +|..+|.. ... .+ .. .. ..++.+.++.|
T Consensus 116 gktvGIIG~-G~IG~~vA~~l~a~G~-------~V~~~dp~----~~~-~~------~~-------~~-~~~L~ell~~s 168 (378)
T PRK15438 116 DRTVGIVGV-GNVGRRLQARLEALGI-------KTLLCDPP----RAD-RG------DE-------GD-FRSLDELVQEA 168 (378)
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCC-------EEEEECCc----ccc-cc------cc-------cc-cCCHHHHHhhC
Confidence 479999999 9999999999998887 89999965 110 10 00 00 13567888999
Q ss_pred cEEEEeC
Q psy9582 85 NIAILIG 91 (329)
Q Consensus 85 DiVi~~~ 91 (329)
|+|++..
T Consensus 169 DiI~lh~ 175 (378)
T PRK15438 169 DILTFHT 175 (378)
T ss_pred CEEEEeC
Confidence 9999863
No 462
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.80 E-value=0.033 Score=49.15 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
+++.|+||+|.+|.+++..|+..|. +|.+.|++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~ 35 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ-------PVIVSYRT 35 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCC
Confidence 4699999999999999999999887 89999987
No 463
>KOG1371|consensus
Probab=95.80 E-value=0.1 Score=48.27 Aligned_cols=107 Identities=11% Similarity=0.112 Sum_probs=64.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEee-cCc--ccc-
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVH-ENP--ITA- 80 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~-~~~--~~a- 80 (329)
...|.|+||+|++|+|.+..|+.+|. +|+.+|.-.....+.+. .+..+.+. ...+.+. .|+ .++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy-------~v~~vDNl~n~~~~sl~-r~~~l~~~----~~~v~f~~~Dl~D~~~L 69 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY-------GVVIVDNLNNSYLESLK-RVRQLLGE----GKSVFFVEGDLNDAEAL 69 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC-------cEEEEecccccchhHHH-HHHHhcCC----CCceEEEEeccCCHHHH
Confidence 46899999999999999999999998 89999986211111111 11111111 1122221 111 122
Q ss_pred ---c--CCccEEEEeCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhc
Q psy9582 81 ---F--KDANIAILIGSFPRK-SN-MERSELLAINSSIFIEQGKALNSVA 123 (329)
Q Consensus 81 ---l--~~aDiVi~~~g~~~~-~g-~~~~~~~~~n~~~~~~i~~~i~~~~ 123 (329)
+ ..-|-|++.|+.... +. +.+......|+-....+.+.++++.
T Consensus 70 ~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~ 119 (343)
T KOG1371|consen 70 EKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN 119 (343)
T ss_pred HHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence 2 245778887765431 11 2234455678888888889999884
No 464
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.79 E-value=0.11 Score=46.56 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+++.|+||++.+|.+++..|++.|. +|++.+++
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~ 41 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGV-------NIAFTYNS 41 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCC
Confidence 46899999999999999999999887 78887653
No 465
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.78 E-value=0.023 Score=51.39 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=29.3
Q ss_pred CCEEEEEcCCC--chHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAG--QIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
.+.+.|+||++ .+|.+++..|++.|. .|++.+++
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G~-------~vil~~r~ 41 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQN 41 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCCC-------EEEEEecc
Confidence 36789999964 799999999999887 89998876
No 466
>PRK05599 hypothetical protein; Provisional
Probab=95.78 E-value=0.11 Score=46.20 Aligned_cols=116 Identities=10% Similarity=0.140 Sum_probs=63.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc--cceEee---------c
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL--VDVSVH---------E 75 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~--~~i~~~---------~ 75 (329)
.+.|+||++.+|.+++..|.+ |. .|.+.+++ .++++....++........ ..+.++ .
T Consensus 2 ~vlItGas~GIG~aia~~l~~-g~-------~Vil~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~ 69 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLCH-GE-------DVVLAARR----PEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVK 69 (246)
T ss_pred eEEEEeCccHHHHHHHHHHhC-CC-------EEEEEeCC----HHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHH
Confidence 488999999999999999984 54 89999988 5555555445543210000 001111 0
Q ss_pred CcccccCCccEEEEeCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhcCCCeEEEEEcCc
Q psy9582 76 NPITAFKDANIAILIGSFPRKSN---ME---RSELLAINS----SIFIEQGKALNSVASRDVKVLVVGNP 135 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g---~~---~~~~~~~n~----~~~~~i~~~i~~~~~p~a~viv~tNP 135 (329)
...+....-|++|+.+|...... .+ ..+....|. ...+.+.+.+.+.. .++.|+++|--
T Consensus 70 ~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~ 138 (246)
T PRK05599 70 QTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT-APAAIVAFSSI 138 (246)
T ss_pred HHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCCEEEEEecc
Confidence 11222456799999888643211 11 112223332 23344556665532 34667776643
No 467
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.77 E-value=0.024 Score=52.78 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
++||+|+||+|..|..+...|....-+ |+.++...
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v------e~~~~ss~ 36 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV------ELILISSR 36 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe------EEEEeech
Confidence 368999999999999999999987654 88888776
No 468
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.76 E-value=0.043 Score=51.77 Aligned_cols=34 Identities=18% Similarity=0.347 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||.|+|+ |.+|+.++..|+..|. + +|.++|.+
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGv-g-----~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGV-G-----KVTIVDRD 57 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 368999999 9999999999999987 4 89999987
No 469
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.75 E-value=0.021 Score=52.40 Aligned_cols=74 Identities=12% Similarity=0.128 Sum_probs=48.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec--CcccccC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE--NPITAFK 82 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~--~~~~al~ 82 (329)
.+++.|+|| |..|.++++.|+..|.. +|.++|++ .++++..+.++.... +.. .+.... +..+.+.
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~~------~i~i~nR~----~~ka~~La~~~~~~~-~~~-~~~~~~~~~~~~~~~ 193 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGVQ------KLQVADLD----TSRAQALADVINNAV-GRE-AVVGVDARGIEDVIA 193 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCC------EEEEEcCC----HHHHHHHHHHHhhcc-Ccc-eEEecCHhHHHHHHh
Confidence 368999999 99999999999988763 89999998 566665544443211 110 111111 1123457
Q ss_pred CccEEEEeC
Q psy9582 83 DANIAILIG 91 (329)
Q Consensus 83 ~aDiVi~~~ 91 (329)
++|+||.+.
T Consensus 194 ~~divINaT 202 (283)
T PRK14027 194 AADGVVNAT 202 (283)
T ss_pred hcCEEEEcC
Confidence 899999874
No 470
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.75 E-value=0.03 Score=48.21 Aligned_cols=77 Identities=13% Similarity=0.132 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||.|.-+|..++..|++.+. .|.+.|++ .......+. .+.|...+. -..+.++.+.++.|
T Consensus 62 GK~vvVIGrS~iVGkPla~lL~~~~A-------tVti~~~~--~~~~~~~~~--~~~hs~t~~---~~~~~~l~~~~~~A 127 (197)
T cd01079 62 GKTITIINRSEVVGRPLAALLANDGA-------RVYSVDIN--GIQVFTRGE--SIRHEKHHV---TDEEAMTLDCLSQS 127 (197)
T ss_pred CCEEEEECCCccchHHHHHHHHHCCC-------EEEEEecC--ccccccccc--ccccccccc---cchhhHHHHHhhhC
Confidence 57999999988999999999998876 89999987 111100100 111111000 00011256788999
Q ss_pred cEEEEeCCCCC
Q psy9582 85 NIAILIGSFPR 95 (329)
Q Consensus 85 DiVi~~~g~~~ 95 (329)
|+||.+.|.+.
T Consensus 128 DIVIsAvG~~~ 138 (197)
T cd01079 128 DVVITGVPSPN 138 (197)
T ss_pred CEEEEccCCCC
Confidence 99999988765
No 471
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.74 E-value=0.029 Score=53.01 Aligned_cols=74 Identities=20% Similarity=0.359 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccC
Q psy9582 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFK 82 (329)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
.+++||+|+||+|.+|..+...|...++-. .++.++.... . .|...+... .++.+..-..+++.
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~----~~l~~las~r----s--aGk~~~~~~------~~~~v~~~~~~~~~ 68 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPY----SSLKMLASAR----S--AGKKVTFEG------RDYTVEELTEDSFD 68 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCc----ceEEEEEccC----C--CCCeeeecC------ceeEEEeCCHHHHc
Confidence 457899999999999999998888754311 1677665441 1 121111111 12333322245778
Q ss_pred CccEEEEeCC
Q psy9582 83 DANIAILIGS 92 (329)
Q Consensus 83 ~aDiVi~~~g 92 (329)
++|+||++.+
T Consensus 69 ~~D~vf~a~p 78 (344)
T PLN02383 69 GVDIALFSAG 78 (344)
T ss_pred CCCEEEECCC
Confidence 9999999764
No 472
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.73 E-value=0.031 Score=55.92 Aligned_cols=92 Identities=11% Similarity=0.155 Sum_probs=58.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|. |.+|+.+|..|...|. +|..||.. ... + ...++ .+....++.+.+++|
T Consensus 138 gktvgIiG~-G~IG~~vA~~l~~fG~-------~V~~~d~~----~~~-~-~~~~~---------g~~~~~~l~ell~~a 194 (525)
T TIGR01327 138 GKTLGVIGL-GRIGSIVAKRAKAFGM-------KVLAYDPY----ISP-E-RAEQL---------GVELVDDLDELLARA 194 (525)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEECCC----CCh-h-HHHhc---------CCEEcCCHHHHHhhC
Confidence 479999999 9999999999988777 89999985 111 1 11111 122234577899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
|+|++...... .++ .++- .+.+... +|++++|+++
T Consensus 195 DvV~l~lPlt~---~T~--------~li~--~~~l~~m-k~ga~lIN~a 229 (525)
T TIGR01327 195 DFITVHTPLTP---ETR--------GLIG--AEELAKM-KKGVIIVNCA 229 (525)
T ss_pred CEEEEccCCCh---hhc--------cCcC--HHHHhcC-CCCeEEEEcC
Confidence 99999743211 011 1110 1444443 5788888887
No 473
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.71 E-value=0.07 Score=50.57 Aligned_cols=72 Identities=15% Similarity=0.214 Sum_probs=44.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a 84 (329)
+||+|+||+|.||+.+...|.....|.. .+++++.... ..|....... ....+.. +..+++++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~---~~~~~~ss~~------s~g~~~~f~~------~~~~v~~~~~~~~~~~v 65 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDA---IRPVFFSTSQ------LGQAAPSFGG------TTGTLQDAFDIDALKAL 65 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCcc---ccEEEEEchh------hCCCcCCCCC------CcceEEcCcccccccCC
Confidence 4799999999999999998884444421 2788887751 1122111111 1222222 222478999
Q ss_pred cEEEEeCC
Q psy9582 85 NIAILIGS 92 (329)
Q Consensus 85 DiVi~~~g 92 (329)
|++|+++|
T Consensus 66 Divffa~g 73 (366)
T TIGR01745 66 DIIITCQG 73 (366)
T ss_pred CEEEEcCC
Confidence 99999875
No 474
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.71 E-value=0.07 Score=50.71 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=43.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeec-CcccccCCc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHE-NPITAFKDA 84 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~-~~~~al~~a 84 (329)
++|+|+||+|.+|..+...++....+... +++++.... ..+....+... ...+.. ...+.++++
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~---~l~~~ss~~------sg~~~~~f~g~------~~~v~~~~~~~~~~~~ 66 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLI---EPVFFSTSQ------AGGAAPSFGGK------EGTLQDAFDIDALKKL 66 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcC---cEEEecchh------hCCcccccCCC------cceEEecCChhHhcCC
Confidence 58999999999999999866665544311 578865541 11111122211 111111 113567899
Q ss_pred cEEEEeCC
Q psy9582 85 NIAILIGS 92 (329)
Q Consensus 85 DiVi~~~g 92 (329)
|+||++++
T Consensus 67 Divf~a~~ 74 (369)
T PRK06598 67 DIIITCQG 74 (369)
T ss_pred CEEEECCC
Confidence 99999865
No 475
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.70 E-value=0.028 Score=54.97 Aligned_cols=71 Identities=18% Similarity=0.309 Sum_probs=45.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCcccc-cCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENPITA-FKD 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~~~a-l~~ 83 (329)
|||.|+|+ |.+|..++..|...+. +++++|.+ .++++...... .... ..+..-...+.++ +++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~-------~v~vid~~----~~~~~~~~~~~---~~~~~~gd~~~~~~l~~~~~~~ 65 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN-------DVTVIDTD----EERLRRLQDRL---DVRTVVGNGSSPDVLREAGAED 65 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-------cEEEEECC----HHHHHHHHhhc---CEEEEEeCCCCHHHHHHcCCCc
Confidence 48999998 9999999999998887 89999998 44443221101 0000 0111111223334 789
Q ss_pred ccEEEEeC
Q psy9582 84 ANIAILIG 91 (329)
Q Consensus 84 aDiVi~~~ 91 (329)
+|.||++.
T Consensus 66 a~~vi~~~ 73 (453)
T PRK09496 66 ADLLIAVT 73 (453)
T ss_pred CCEEEEec
Confidence 99999873
No 476
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=95.67 E-value=0.069 Score=48.78 Aligned_cols=119 Identities=17% Similarity=0.159 Sum_probs=70.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCCc-cceEeecCcccccC-
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPLL-VDVSVHENPITAFK- 82 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~~-~~i~~~~~~~~al~- 82 (329)
++|.|+|++|+||+++...++....-. +|+.+|.- .....++ ...++.+.. ..+. .++.-.....+.++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~-----~v~~~DkL--TYAgn~~-~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~ 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDD-----HVVNLDKL--TYAGNLE-NLADVEDSPRYRFVQGDICDRELVDRLFKE 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCc-----eEEEEecc--cccCCHH-HHHhhhcCCCceEEeccccCHHHHHHHHHh
Confidence 579999999999999999988765421 68888875 1111222 112232211 0111 12211122234455
Q ss_pred -CccEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 83 -DANIAILIGSFPR--KSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 83 -~aDiVi~~~g~~~--~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
+.|.|+..|.-.- ++=.....++..|+-....+.+..+++- ..-.++-+|
T Consensus 73 ~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HIS 125 (340)
T COG1088 73 YQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHIS 125 (340)
T ss_pred cCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEec
Confidence 5899998764322 1112355778899999999999999984 433444444
No 477
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.033 Score=48.85 Aligned_cols=112 Identities=7% Similarity=0.031 Sum_probs=60.4
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcc-cCC-ccceEeecCcccc---cCC
Q psy9582 9 SITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI-FPL-LVDVSVHENPITA---FKD 83 (329)
Q Consensus 9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~-~~~-~~~i~~~~~~~~a---l~~ 83 (329)
.|+||+|.+|..++..|++.|. +|++.+++ .+.+.....++.... ... ..++.-..+..++ +..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 69 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-------RVTIASRS----RDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGP 69 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCC
Confidence 3899999999999999999987 89999998 333433333332100 000 0011111111222 334
Q ss_pred ccEEEEeCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEc
Q psy9582 84 ANIAILIGSFPRKS---NM---ERSELLAINSSIFIEQGKALNSVASRDVKVLVVG 133 (329)
Q Consensus 84 aDiVi~~~g~~~~~---g~---~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~t 133 (329)
.|++|..+|..... .. .....+..|+.....+.+ +.... +.+.|++++
T Consensus 70 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-~~~~~-~~g~iv~~s 123 (230)
T PRK07041 70 FDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-AARIA-PGGSLTFVS 123 (230)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh-hhhhc-CCeEEEEEC
Confidence 79999988764321 11 123445566665556655 22222 344555544
No 478
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.64 E-value=0.026 Score=51.64 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=45.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|||.||.||..++..|++.+. +|+++... .. ++.+.+++|
T Consensus 158 Gk~v~vIG~S~ivG~Pla~lL~~~ga-------tVtv~~s~----t~------------------------~l~~~~~~A 202 (284)
T PRK14179 158 GKHAVVIGRSNIVGKPMAQLLLDKNA-------TVTLTHSR----TR------------------------NLAEVARKA 202 (284)
T ss_pred CCEEEEECCCCcCcHHHHHHHHHCCC-------EEEEECCC----CC------------------------CHHHHHhhC
Confidence 57999999999999999999999886 88888443 10 245678999
Q ss_pred cEEEEeCCCCC
Q psy9582 85 NIAILIGSFPR 95 (329)
Q Consensus 85 DiVi~~~g~~~ 95 (329)
|+||.+.|.|.
T Consensus 203 DIVI~avg~~~ 213 (284)
T PRK14179 203 DILVVAIGRGH 213 (284)
T ss_pred CEEEEecCccc
Confidence 99999987765
No 479
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.60 E-value=0.041 Score=49.52 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=30.6
Q ss_pred CCC-CCCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLK-KPVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~-~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||+ +.+.+.|+||+ +.+|..++..|++.|. +|++.+++
T Consensus 1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~-------~v~~~~~~ 41 (258)
T PRK07370 1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGA-------ELGITYLP 41 (258)
T ss_pred CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEEecC
Confidence 553 34678999985 6999999999999887 88888765
No 480
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=95.58 E-value=0.045 Score=51.75 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=21.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDL 30 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~ 30 (329)
+||+|+||+|.+|..++..|.....
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~ 27 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPE 27 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC
Confidence 5899999999999999998887644
No 481
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=95.57 E-value=0.12 Score=40.95 Aligned_cols=23 Identities=26% Similarity=0.559 Sum_probs=20.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhCC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGD 29 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~ 29 (329)
||+|+|++|.+|..++..|....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~ 23 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHP 23 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCC
Confidence 68999987999999999888853
No 482
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.56 E-value=0.039 Score=46.12 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=43.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
..+++.|+|- |.+|+.+|..|...|. .|.++|++ +-++ ++..+.. +++. ...++++.
T Consensus 22 ~Gk~vvV~GY-G~vG~g~A~~lr~~Ga-------~V~V~e~D----Pi~a------lqA~~dG----f~v~-~~~~a~~~ 78 (162)
T PF00670_consen 22 AGKRVVVIGY-GKVGKGIARALRGLGA-------RVTVTEID----PIRA------LQAAMDG----FEVM-TLEEALRD 78 (162)
T ss_dssp TTSEEEEE---SHHHHHHHHHHHHTT--------EEEEE-SS----HHHH------HHHHHTT-----EEE--HHHHTTT
T ss_pred CCCEEEEeCC-CcccHHHHHHHhhCCC-------EEEEEECC----hHHH------HHhhhcC----cEec-CHHHHHhh
Confidence 4578999999 9999999999999887 89999999 3222 1221112 2332 46789999
Q ss_pred ccEEEEeCCC
Q psy9582 84 ANIAILIGSF 93 (329)
Q Consensus 84 aDiVi~~~g~ 93 (329)
+|++|.+.|.
T Consensus 79 adi~vtaTG~ 88 (162)
T PF00670_consen 79 ADIFVTATGN 88 (162)
T ss_dssp -SEEEE-SSS
T ss_pred CCEEEECCCC
Confidence 9999887554
No 483
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.55 E-value=0.017 Score=46.72 Aligned_cols=34 Identities=26% Similarity=0.519 Sum_probs=30.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||+|+|+ |.+|+.++..|+..|. + +++|+|.+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~-----~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGV-G-----KITLVDDD 35 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTT-S-----EEEEEESS
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCC-C-----ceeecCCc
Confidence 469999999 9999999999999987 3 89999998
No 484
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.55 E-value=0.044 Score=42.77 Aligned_cols=30 Identities=23% Similarity=0.501 Sum_probs=26.5
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
|.|+|. |.+|..++..|...+. +++++|.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~-------~vvvid~d 30 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGI-------DVVVIDRD 30 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS-------EEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCC-------EEEEEECC
Confidence 679998 9999999999999764 89999999
No 485
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.53 E-value=0.034 Score=52.37 Aligned_cols=71 Identities=17% Similarity=0.344 Sum_probs=43.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCcc
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDAN 85 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
+||+|+||+|.+|..++..|...++-. .+|+.+-.+. . .+...++.. ..+.+......+++++|
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~----~~l~~l~s~~----~--~g~~l~~~g------~~i~v~d~~~~~~~~vD 65 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPV----DKLRLLASAR----S--AGKELSFKG------KELKVEDLTTFDFSGVD 65 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc----ceEEEEEccc----c--CCCeeeeCC------ceeEEeeCCHHHHcCCC
Confidence 589999999999999999998754411 2777775541 1 111111211 12333222234568999
Q ss_pred EEEEeCC
Q psy9582 86 IAILIGS 92 (329)
Q Consensus 86 iVi~~~g 92 (329)
+||++.|
T Consensus 66 vVf~A~g 72 (334)
T PRK14874 66 IALFSAG 72 (334)
T ss_pred EEEECCC
Confidence 9999854
No 486
>PRK08017 oxidoreductase; Provisional
Probab=95.52 E-value=0.049 Score=48.49 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=30.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
++|.|+||+|.+|.+++..|++.|. +|++++++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-------~v~~~~r~ 35 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-------RVLAACRK 35 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 3699999999999999999998886 89999988
No 487
>KOG1200|consensus
Probab=95.49 E-value=0.24 Score=42.66 Aligned_cols=126 Identities=13% Similarity=0.138 Sum_probs=75.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhc----ccCCc----cceEee-c
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC----IFPLL----VDVSVH-E 75 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~----~~~~~----~~i~~~-~ 75 (329)
+....|.||+..||.+++..|+..|. +|...|.+ ...+++-+.+|... .+.+. .++.-+ .
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Ga-------rv~v~dl~----~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~ 82 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGA-------RVAVADLD----SAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLE 82 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCc-------EEEEeecc----hhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHH
Confidence 35677899988999999999999998 89999999 45556666666431 11111 011110 0
Q ss_pred CcccccCCccEEEEeCCCCCCCC------CCHHHHHHHHHHHH----HHHHHHHhhhcCCCeEEEEEcCchhhHHH
Q psy9582 76 NPITAFKDANIAILIGSFPRKSN------MERSELLAINSSIF----IEQGKALNSVASRDVKVLVVGNPVNTNTY 141 (329)
Q Consensus 76 ~~~~al~~aDiVi~~~g~~~~~g------~~~~~~~~~n~~~~----~~i~~~i~~~~~p~a~viv~tNP~~~~~~ 141 (329)
...+.+---++++.++|..+..- ..+.+.+..|+.-+ +..++.+........-||+++--+..+..
T Consensus 83 e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN 158 (256)
T KOG1200|consen 83 EMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN 158 (256)
T ss_pred HHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc
Confidence 11123445689999999876432 23555566666533 33444433322123367888876655443
No 488
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.48 E-value=0.039 Score=55.20 Aligned_cols=92 Identities=13% Similarity=0.178 Sum_probs=58.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|. |.+|+.+|..|...|. +|+.||.. ... + ...++ .+... ++.+.++.|
T Consensus 140 gktvgIiG~-G~IG~~vA~~l~~fG~-------~V~~~d~~----~~~-~-~~~~~---------g~~~~-~l~ell~~a 195 (526)
T PRK13581 140 GKTLGIIGL-GRIGSEVAKRAKAFGM-------KVIAYDPY----ISP-E-RAAQL---------GVELV-SLDELLARA 195 (526)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-------EEEEECCC----CCh-h-HHHhc---------CCEEE-cHHHHHhhC
Confidence 479999999 9999999999998887 89999986 211 1 11111 11222 567899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+|+++..... .++ .++- .+.+... +|++++|+++-
T Consensus 196 DiV~l~lP~t~---~t~--------~li~--~~~l~~m-k~ga~lIN~aR 231 (526)
T PRK13581 196 DFITLHTPLTP---ETR--------GLIG--AEELAKM-KPGVRIINCAR 231 (526)
T ss_pred CEEEEccCCCh---Hhh--------cCcC--HHHHhcC-CCCeEEEECCC
Confidence 99999743211 011 1110 1333433 57888888874
No 489
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.48 E-value=0.056 Score=49.82 Aligned_cols=79 Identities=10% Similarity=0.107 Sum_probs=47.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCc-cceEee--cCccccc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLL-VDVSVH--ENPITAF 81 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~-~~i~~~--~~~~~al 81 (329)
.+++.|+|| |.+|.+++..|+..|.- +|++++++... .++++..+.++.+...... .....+ .+..+.+
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~~------~V~I~~R~~~~-~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~ 197 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGAK------EITIFNIKDDF-YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI 197 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCC------EEEEEeCCchH-HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh
Confidence 468999999 99999999999988862 69999998200 1444444444432210100 001111 1223456
Q ss_pred CCccEEEEeC
Q psy9582 82 KDANIAILIG 91 (329)
Q Consensus 82 ~~aDiVi~~~ 91 (329)
+.+|+||.+.
T Consensus 198 ~~~DilINaT 207 (289)
T PRK12548 198 ASSDILVNAT 207 (289)
T ss_pred ccCCEEEEeC
Confidence 7889999864
No 490
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.47 E-value=0.048 Score=44.62 Aligned_cols=56 Identities=11% Similarity=0.189 Sum_probs=44.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
+.++|.|+|.+..+|..++..|.+.+. ++.+.|.+ .. ++.+++++
T Consensus 27 ~gk~v~VvGrs~~vG~pla~lL~~~ga-------tV~~~~~~----t~------------------------~l~~~v~~ 71 (140)
T cd05212 27 DGKKVLVVGRSGIVGAPLQCLLQRDGA-------TVYSCDWK----TI------------------------QLQSKVHD 71 (140)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeCCC----Cc------------------------CHHHHHhh
Confidence 357999999988999999999988776 78888766 11 34567899
Q ss_pred ccEEEEeCCCC
Q psy9582 84 ANIAILIGSFP 94 (329)
Q Consensus 84 aDiVi~~~g~~ 94 (329)
||+||.+.|.+
T Consensus 72 ADIVvsAtg~~ 82 (140)
T cd05212 72 ADVVVVGSPKP 82 (140)
T ss_pred CCEEEEecCCC
Confidence 99999987765
No 491
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=95.46 E-value=0.045 Score=48.23 Aligned_cols=31 Identities=29% Similarity=0.339 Sum_probs=27.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
|.|+||+|++|.+++..|++.|. +++++++.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~-------~v~~~~~~ 31 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF-------EICVHYHS 31 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 57999999999999999999987 88888765
No 492
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=95.46 E-value=0.17 Score=45.58 Aligned_cols=74 Identities=18% Similarity=0.286 Sum_probs=45.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
++||+|.||+|.||+.+...+.+.+-+. =+..+|+. .....+ .|.......-...+.++.++.....++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~-----L~aa~~~~----~~~~~g--~d~ge~~g~~~~gv~v~~~~~~~~~~~ 70 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLE-----LVAAFDRP----GSLSLG--SDAGELAGLGLLGVPVTDDLLLVKADA 70 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCce-----EEEEEecC----Cccccc--cchhhhccccccCceeecchhhcccCC
Confidence 4689999999999999999998776331 34455665 111111 122222111112455566667788899
Q ss_pred cEEEE
Q psy9582 85 NIAIL 89 (329)
Q Consensus 85 DiVi~ 89 (329)
|++|=
T Consensus 71 DV~ID 75 (266)
T COG0289 71 DVLID 75 (266)
T ss_pred CEEEE
Confidence 99884
No 493
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.45 E-value=0.066 Score=50.12 Aligned_cols=92 Identities=15% Similarity=0.189 Sum_probs=58.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++++|+|. |.||+.+|..+..-|. +|.-+|+. .. .+ ...+. ..+... +.+.++.|
T Consensus 146 gktvGIiG~-GrIG~avA~r~~~Fgm-------~v~y~~~~----~~-~~-~~~~~---------~~~y~~-l~ell~~s 201 (324)
T COG1052 146 GKTLGIIGL-GRIGQAVARRLKGFGM-------KVLYYDRS----PN-PE-AEKEL---------GARYVD-LDELLAES 201 (324)
T ss_pred CCEEEEECC-CHHHHHHHHHHhcCCC-------EEEEECCC----CC-hH-HHhhc---------Cceecc-HHHHHHhC
Confidence 579999998 9999999999995565 89999998 22 11 10111 112222 67899999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+|++...... +++. .-| .+.+++. ++++++||.+-
T Consensus 202 Dii~l~~Plt~---~T~h---Lin-------~~~l~~m-k~ga~lVNtaR 237 (324)
T COG1052 202 DIISLHCPLTP---ETRH---LIN-------AEELAKM-KPGAILVNTAR 237 (324)
T ss_pred CEEEEeCCCCh---HHhh---hcC-------HHHHHhC-CCCeEEEECCC
Confidence 99998643211 0111 111 1344444 58899998873
No 494
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.43 E-value=0.28 Score=44.03 Aligned_cols=38 Identities=21% Similarity=0.229 Sum_probs=31.5
Q ss_pred CCCC--CCEEEEEcCC--CchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 1 MLKK--PVRISITGAA--GQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 1 ~~~~--~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
||.+ .+.+.|+||+ +.+|.+++..|++.|. +|++.+++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~-------~v~~~~r~ 42 (257)
T PRK08594 1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGA-------KLVFTYAG 42 (257)
T ss_pred CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEecCc
Confidence 5543 4688999996 6999999999999987 89998765
No 495
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.41 E-value=0.054 Score=47.84 Aligned_cols=32 Identities=16% Similarity=0.218 Sum_probs=27.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEE-ecC
Q psy9582 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLL-EAS 45 (329)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~ 45 (329)
.+.|+||+|++|.+++..|++.|. +|.+. +++
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g~-------~v~~~~~~~ 35 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGY-------TVAVNYQQN 35 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCC
Confidence 699999999999999999999886 77764 454
No 496
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.40 E-value=0.059 Score=46.78 Aligned_cols=34 Identities=18% Similarity=0.413 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecC
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEAS 45 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (329)
..||+|+|+ |.+|+.++..|+..|. + +|+++|.+
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GV-g-----~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGI-D-----SITIVDHR 52 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCC-C-----EEEEEECC
Confidence 369999999 9999999999999997 3 89999977
No 497
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.40 E-value=0.051 Score=51.41 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=27.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEE-EEecC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQ-LLEAS 45 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~ 45 (329)
+||+|+||+|.+|..++..|.....+ +++ +++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~------el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV------EITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc------eEEEEeccc
Confidence 58999999999999999999876443 677 66765
No 498
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.38 E-value=0.069 Score=52.21 Aligned_cols=100 Identities=13% Similarity=0.174 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCC
Q psy9582 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKD 83 (329)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
+.++|.|+|+ |.+|..+|..|+..|. +|+++|.+. .+.+.....++.... ..+.......+...+
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~-------~V~~~d~~~---~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~ 68 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGA-------KVILTDEKE---EDQLKEALEELGELG----IELVLGEYPEEFLEG 68 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCCc---hHHHHHHHHHHHhcC----CEEEeCCcchhHhhc
Confidence 3579999999 8899999999999998 899999982 122222222332111 111111111234578
Q ss_pred ccEEEEeCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHh
Q psy9582 84 ANIAILIGSFPRKSNMERSEL-LAINSSIFIEQGKALN 120 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~-~~~n~~~~~~i~~~i~ 120 (329)
+|+||.++|.+. ..+.... -..+++++...+....
T Consensus 69 ~d~vv~~~g~~~--~~~~~~~a~~~~i~~~~~~~~~~~ 104 (450)
T PRK14106 69 VDLVVVSPGVPL--DSPPVVQAHKKGIEVIGEVELAYR 104 (450)
T ss_pred CCEEEECCCCCC--CCHHHHHHHHCCCcEEeHHHHHHh
Confidence 999999888643 1111111 2345555555544333
No 499
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.37 E-value=0.12 Score=52.54 Aligned_cols=140 Identities=13% Similarity=0.101 Sum_probs=81.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCC-ccceEeecCc-ccccCC
Q psy9582 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPL-LVDVSVHENP-ITAFKD 83 (329)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~-~~~i~~~~~~-~~al~~ 83 (329)
.+|.|+|. |.+|+.++..|...+. +++++|.| +++.+. +++...+. ..+.+-..-+ ...+++
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~-------~vvvID~d----~~~v~~----~~~~g~~v~~GDat~~~~L~~agi~~ 464 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKM-------RITVLERD----ISAVNL----MRKYGYKVYYGDATQLELLRAAGAEK 464 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCC-------CEEEEECC----HHHHHH----HHhCCCeEEEeeCCCHHHHHhcCCcc
Confidence 68999998 9999999999998887 89999999 554442 22211111 1111100111 234779
Q ss_pred ccEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEE-cCchhhHHHHHHHHCCCCCCCcEEEechhH
Q psy9582 84 ANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVV-GNPVNTNTYITMKSAPDLSYKNFTAMLRLD 162 (329)
Q Consensus 84 aDiVi~~~g~~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~-tNP~~~~~~~~~~~~~~~~~~~i~~~t~ld 162 (329)
||.||++-+.. ..| ..++..+++.. |+..++.- .||.+.- .+. .. |. +.++-=+..-
T Consensus 465 A~~vv~~~~d~-----------~~n----~~i~~~~r~~~-p~~~IiaRa~~~~~~~--~L~-~~-Ga--~~vv~e~~es 522 (601)
T PRK03659 465 AEAIVITCNEP-----------EDT----MKIVELCQQHF-PHLHILARARGRVEAH--ELL-QA-GV--TQFSRETFSS 522 (601)
T ss_pred CCEEEEEeCCH-----------HHH----HHHHHHHHHHC-CCCeEEEEeCCHHHHH--HHH-hC-CC--CEEEccHHHH
Confidence 99999873221 223 34556667774 88665544 4664432 222 23 33 2344334444
Q ss_pred HHHHHHHHHHHhCCCCCCeeE
Q psy9582 163 HNRAIAKLASKLNEPVSSIKK 183 (329)
Q Consensus 163 s~r~~~~la~~l~~~~~~v~~ 183 (329)
+..+....-..+|++++++..
T Consensus 523 ~l~l~~~~L~~lg~~~~~~~~ 543 (601)
T PRK03659 523 ALELGRKTLVSLGMHPHQAQR 543 (601)
T ss_pred HHHHHHHHHHHcCCCHHHHHH
Confidence 455666777788888877753
No 500
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.37 E-value=0.064 Score=49.99 Aligned_cols=88 Identities=18% Similarity=0.188 Sum_probs=57.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCCCCCCceEEEEecCCcccccchhhhHhhhhhcccCCccceEeecCcccccCCc
Q psy9582 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLVDVSVHENPITAFKDA 84 (329)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~~~~~~~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
.++|+|+|- |.||+.+|..+..-|. +|..||.. ... . +. . +. ..++.+.++.|
T Consensus 145 gktvGIiG~-G~IG~~vA~~~~~fgm-------~V~~~d~~----~~~-~-------~~--~----~~-~~~l~ell~~s 197 (311)
T PRK08410 145 GKKWGIIGL-GTIGKRVAKIAQAFGA-------KVVYYSTS----GKN-K-------NE--E----YE-RVSLEELLKTS 197 (311)
T ss_pred CCEEEEECC-CHHHHHHHHHHhhcCC-------EEEEECCC----ccc-c-------cc--C----ce-eecHHHHhhcC
Confidence 479999998 9999999999887676 89999986 211 0 00 0 11 13577899999
Q ss_pred cEEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEcC
Q psy9582 85 NIAILIGSF-PRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGN 134 (329)
Q Consensus 85 DiVi~~~g~-~~~~g~~~~~~~~~n~~~~~~i~~~i~~~~~p~a~viv~tN 134 (329)
|+|++.... +...++ -| .+.+... +|++++||++-
T Consensus 198 Dvv~lh~Plt~~T~~l-------i~-------~~~~~~M-k~~a~lIN~aR 233 (311)
T PRK08410 198 DIISIHAPLNEKTKNL-------IA-------YKELKLL-KDGAILINVGR 233 (311)
T ss_pred CEEEEeCCCCchhhcc-------cC-------HHHHHhC-CCCeEEEECCC
Confidence 999987422 211111 01 1333333 58999999984
Done!