RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9582
(329 letters)
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 169 bits (428), Expect = 2e-52
Identities = 81/158 (51%), Positives = 119/158 (75%), Gaps = 2/158 (1%)
Query: 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
KK V I+++GAAG I +++F++A+G++ G+DQPI L+LL + ++S +A++GV ME+
Sbjct: 20 SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS--ERSFQALEGVAMEL 77
Query: 61 EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALN 120
ED ++PLL +VS+ +P F+D + A+LIG+ PR MER+ LL IN IF +QGKALN
Sbjct: 78 EDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALN 137
Query: 121 SVASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM 158
+VAS++VKVLVVGNP NTN I +K+APD+ KNF A+
Sbjct: 138 AVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHAL 175
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 159 bits (402), Expect = 2e-48
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
RLD NRA +LA K + V +WGNHS + PD+ A ++G ++++I W
Sbjct: 2 RLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTK-WL 60
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGS-YN 276
+ F + +RG +I G SSAAS A + D IK + T +W + G+ + G+ Y
Sbjct: 61 EEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYG 120
Query: 277 VPKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
+ +DI+F P + + Y++ ++ D F ++I S EL E ++HL
Sbjct: 121 IAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEKKCVAHLT 173
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 144 bits (363), Expect = 7e-43
Identities = 72/175 (41%), Positives = 102/175 (58%), Gaps = 6/175 (3%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRD---MINNNS 216
RLDHNRA A++A KL +K V +WGNHS + YPD +A V +
Sbjct: 2 RLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDD 61
Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTEN--WVTMGIPSDG- 273
W K F+ + +RG +I R SSA SAA A DH++D FGT +V+MGI SDG
Sbjct: 62 SWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGN 121
Query: 274 SYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
SY VP D+++ FPV IK+ +KI++ L I+ FSR+K++L+ +EL E + +
Sbjct: 122 SYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAFEFL 176
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 139 bits (352), Expect = 1e-41
Identities = 92/156 (58%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
Query: 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
+K PVR+++TGAAGQIGY+++FRIA G++LGKDQP+ILQLLE ++ KA++GV+ME+E
Sbjct: 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI--PQAMKALEGVVMELE 58
Query: 62 DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
DC FPLL + ++P AFKDA+ A+L+G+ PRK+ MER +LL +N IF EQG+AL
Sbjct: 59 DCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE 118
Query: 122 VASRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTA 157
VA +DVKVLVVGNP NTN I K+AP L+ +NFTA
Sbjct: 119 VAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTA 154
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 140 bits (353), Expect = 2e-41
Identities = 77/172 (44%), Positives = 120/172 (69%), Gaps = 4/172 (2%)
Query: 158 MLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSF 217
M RLDHNRA A+LA K V I+++ VWGNHS +M+PD +A V+G ++++
Sbjct: 1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME-- 58
Query: 218 WNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGSY 275
W + VF+P +++RG II RGASSAASAA+AAI+HI+DW GT +WV+M +PS G Y
Sbjct: 59 WYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEY 118
Query: 276 NVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
+P+ I++ FPV K+ Y++++ LEI++F+RK++ ++ +EL +E+ + L
Sbjct: 119 GIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQVKAL 170
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 138 bits (348), Expect = 7e-41
Identities = 75/155 (48%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
+P+R+ +TGAAGQI Y++++ I NG + GKDQPIIL LL+ + GV+ME++DC
Sbjct: 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI--TPMMGVLDGVLMELQDC 59
Query: 64 IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
PLL DV + AFKD ++AIL+GS PR+ MER +LL N IF QG AL+ A
Sbjct: 60 ALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 119
Query: 124 SRDVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM 158
+ VKV+VVGNP NTN KSAP + +NF+ +
Sbjct: 120 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCL 154
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 126 bits (318), Expect = 2e-36
Identities = 94/171 (54%), Positives = 129/171 (75%), Gaps = 2/171 (1%)
Query: 159 LRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFW 218
LRLDHNRA++++A+K +PVSSI+K+FVWGNHS +MY DYRYA ++G ++DMIN++++
Sbjct: 1 LRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWN 60
Query: 219 NKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSYNV 277
P + +RG II RG SSAASAA+AAIDHI DW+ GT W TMGIPSDGSY +
Sbjct: 61 RDTFL-PTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGI 119
Query: 278 PKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
P+ +IFGFPV +N +YKI+Q L ID FS+++IN+++ EL E + HL+
Sbjct: 120 PEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQNGVQHLL 170
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 109 bits (273), Expect = 1e-29
Identities = 18/162 (11%), Positives = 46/162 (28%), Gaps = 1/162 (0%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
LD R + +L S +V G H S+ + V + + + N
Sbjct: 4 NLDSARFRYLMGERLGVHSCSCH-GWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
L + ++ + + D + + + Y +
Sbjct: 63 DWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIKD 122
Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
++ P + + I +++ +++ S L +
Sbjct: 123 NVFLSLPCVLNDHGISNIVKMKLKPNEEQQLQKSATTLWDIQ 164
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 107 bits (268), Expect = 6e-29
Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMIN---NNS 216
LD R +A KL SS ++ G H S + V GV ++++ ++
Sbjct: 4 NLDSARFRYLMAEKLGIHPSSCH-GWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDN 62
Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
+ + + + + + D I+ + + G Y
Sbjct: 63 DSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYG 122
Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
+ ++ P + + N ++ ++ S + L + +
Sbjct: 123 IENEVFLSLPCILNARGLTSVINQKLKDDEVAQLKKSADTLWDIQKDL 170
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 107 bits (267), Expect = 9e-29
Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMIN---NNS 216
LD R + KL +S +V G H S P + V GV ++ + +
Sbjct: 4 NLDSARFRYLIGEKLGVNPTSCH-GWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62
Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
+ G + ++ + + D + + + + G +
Sbjct: 63 NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122
Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
+ +++ P + S + + + S + L N ++
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKVNMTAEEEGLLKKSADTLWNMQKNL 170
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 104 bits (261), Expect = 6e-28
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 3/169 (1%)
Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN- 219
LD R +A L+ ++ V G H M P RY TVNG I+ I +
Sbjct: 4 LDSGRFRRYVADALSVSPRDVQ-ATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62
Query: 220 -KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVP 278
G EI+ G SA A +A+ + E V
Sbjct: 63 QLEEIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGL 122
Query: 279 KDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
KD+ G P I + + + LE+++ +K+ S++++ +++ L
Sbjct: 123 KDMFIGLPAVIGGAGIERVIELELNEEEKKQFQKSVDDVMALNKAVAAL 171
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 103 bits (258), Expect = 1e-27
Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSF-- 217
LD R +A + V ++ ++ G H S P + AT+ GV + D
Sbjct: 2 NLDSARLRFLIAQQTGVNVKNVH-AYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60
Query: 218 --WNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSY 275
+K + + I ++ + + +D I+ + T + + +
Sbjct: 61 LDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDFH 120
Query: 276 NVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
DI P + N + + S E LK
Sbjct: 121 -GISDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSAETLKETA 165
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 103 bits (257), Expect = 2e-27
Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 4/161 (2%)
Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
LD R + +A +L + I V G H +M P +Y TV G+ I D++
Sbjct: 4 LDAARFRSFIAMELGVSMQDIN-ACVLGGHGDAMVPVVKYTTVAGIPISDLLPA---ETI 59
Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKD 280
+ + G EI+ SA A ++++ + + I V
Sbjct: 60 DKLVERTRNGGAEIVEHLKQGSAFYAPASSVVEMVESIVLDRKRVLPCAVGLEGQYGIDK 119
Query: 281 IIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
G PVK+ + + I + +D+ + S + +
Sbjct: 120 TFVGVPVKLGRNGVEQIYEINLDQADLDLLQKSAKIVDENC 160
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 99.6 bits (247), Expect = 6e-26
Identities = 24/164 (14%), Positives = 56/164 (34%), Gaps = 4/164 (2%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN--SF 217
LD R L + ++ ++ G H + P + A + + IR ++ +
Sbjct: 2 ILDTARFRFLLGEYFSVAPQNVH-AYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60
Query: 218 WNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNV 277
+ R I + ++ A + + I EN +
Sbjct: 61 QKDLERIFVNVRDAAYQIIEKKGATYYGIA-MGLARVTRAILHNENAILTVSAYLDGLYG 119
Query: 278 PKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
+D+ G P I + + + +E++ + + + S LK+ +
Sbjct: 120 ERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVL 163
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 98.4 bits (244), Expect = 2e-25
Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 3/168 (1%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
LD R +A + ++ + G H SM P ++ G+ I+
Sbjct: 4 HLDSLRFKVAIAKFFGVHIDEVR-TRIIGEHGDSMVPLLSATSIGGIPIQKFERFKELPI 62
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
+ + E I S A+A ++ ++ + + +T+ DG ++ +
Sbjct: 63 DEII--EDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIR 120
Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHL 327
D+ G PVKI + + ++E+DK S E +K + +L
Sbjct: 121 DVCIGVPVKIGRDGIEEVVSIELDKDEIIAFRKSAEIIKKYCEEVKNL 168
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 97.5 bits (242), Expect = 3e-25
Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)
Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
LD R +A + V ++ + G H M P R++T++G+ + + I +
Sbjct: 4 LDAARYRTFIAMEAGVSVKDVQ-AMLMGGHGDEMVPLPRFSTISGIPVSEFI---APDRL 59
Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKD 280
+ + G EI+++ SA A +AA + + + + V D
Sbjct: 60 AQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLND 119
Query: 281 IIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
I FG PV + + I L +++ +N S + ++ +
Sbjct: 120 IYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRATL 160
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 95.3 bits (236), Expect = 2e-24
Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 5/170 (2%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
LD R L+ KL V ++ ++ G H S P + + G I + I++
Sbjct: 2 VLDSIRFRYLLSEKLGVDVKNVH-GYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60
Query: 220 KNVFLPAISR---RGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
I+ I ++ A + ++ + T+G +G Y
Sbjct: 61 TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYG 120
Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISH 326
+ +D+ P + + + + + + + S E++K + + +
Sbjct: 121 I-EDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKVLNEVKN 169
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 94.9 bits (235), Expect = 3e-24
Identities = 34/162 (20%), Positives = 53/162 (32%), Gaps = 1/162 (0%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
LD +R L + N S+ ++ G H S + Y AT+ +RD+ +
Sbjct: 2 SLDSSRLRVALGKQFNVDPRSVD-AYIMGEHGDSEFAAYSTATIGTRPVRDVAKEQGVSD 60
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
++ R + I + A+ I I EN V
Sbjct: 61 DDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGLN 120
Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
DI G P I + K I + KK+ S LK +
Sbjct: 121 DIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKVL 162
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 94.9 bits (235), Expect = 3e-24
Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 6/169 (3%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---S 216
LD R +A S+ V+V G H S P + A + G+ +++M
Sbjct: 3 VLDTARLRTLIAQHCGFSPRSVH-VYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61
Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYN 276
F R EII +GA+ A + A+ I + IF E V Y
Sbjct: 62 SKILENFAEKTKRAAYEIIERKGAT--HYAIALAVADIVESIFFDEKRVLTLSVYLEDYL 119
Query: 277 VPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSIS 325
KD+ PV + + I L +++ + S LKN I I+
Sbjct: 120 GVKDLCISVPVTLGKHGVERILELNLNEEELEAFRKSASILKNAINEIT 168
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 93.6 bits (232), Expect = 9e-24
Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 11/165 (6%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
LD RA A +A + + + G+ ++ P T +D ++ +
Sbjct: 3 TLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGRI 62
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGSYNV 277
+ G E++ + + +A+ + A + + S
Sbjct: 63 QE--------AGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQE 114
Query: 278 PKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
F P+ + K K + +I F K I +I ELK I
Sbjct: 115 TDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASI 159
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 93.0 bits (230), Expect = 1e-23
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN- 219
LD +R ++ KLN + + G H M RY TV G+ +++ INN +
Sbjct: 3 LDTSRLKYYISQKLNVCPRDVN-AHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
+ + + I AS + A+A I+ + ++ + + +G Y
Sbjct: 62 ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HS 120
Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNE 320
DI G PV + + + + L+++ + K + +I E K
Sbjct: 121 DIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRM 161
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 93.0 bits (230), Expect = 1e-23
Identities = 22/169 (13%), Positives = 49/169 (28%), Gaps = 8/169 (4%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
LD R + + S+ + G H S + + V G I + + +
Sbjct: 3 LLDTARMQRAVGEAFDLDPRSVS-GYNLGEHGNSQFVAWSTVRVMGQPIVTLADAGD-ID 60
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPK 279
+ G +++ +G +S A SA +
Sbjct: 61 LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVM------ADAHAELVVSNRRDDM 114
Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISHLI 328
+ +P I L++ ++K+ S + ++ I +
Sbjct: 115 GMYLSYPAIIGRDGVLAETTLDLTTDEQEKLLQSRDYIQQRFDEIVDTL 163
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 91.7 bits (227), Expect = 4e-23
Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 12/165 (7%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWN 219
LD R+ +A + ++ + G+ +++ P + +
Sbjct: 3 TLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQ---------VPGVSFTEQE 53
Query: 220 KNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGT--ENWVTMGIPSDGSYNV 277
I G E++ + +A+ + + + + +
Sbjct: 54 VADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDG 113
Query: 278 PKDIIFGFPVKI-KNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
F P+ + KN + + F + + ++ LK +I
Sbjct: 114 QYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDI 158
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 90.1 bits (223), Expect = 9e-23
Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 18/161 (11%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
++++ GAAG IG + + G + + GV +++
Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLY---------DIAPVTPGVAVDLSHIPTA 52
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
+ + E+ A + A++ ++ RK M+RS+L +N+ I + +
Sbjct: 53 VKIKGFSGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PK 111
Query: 127 VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI 167
+ ++ NPVNT I + D N+
Sbjct: 112 ACIGIITNPVNTTVAIA--------AEVLKKAGVYDKNKLF 144
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 88.7 bits (219), Expect = 4e-22
Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 8/165 (4%)
Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
LD R L+ + + PV +++ + G H + P + +V+ S K
Sbjct: 5 LDSARFRYVLSEEFDAPVQNVE-GTILGEHGDAQVPVFSKVSVD-----GTDPEFSGDEK 58
Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKD 280
L + ++I +GA+ A + H+ + I V +D
Sbjct: 59 EQLLGDLQESAMDVIERKGATEWGPAR--GVAHMVEAILHDTGEVLPASVKLEGEFGHED 116
Query: 281 IIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSIS 325
FG PV + ++ + I ++D + + + + E+L ++ IS
Sbjct: 117 TAFGVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKIS 161
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 83.9 bits (207), Expect = 2e-20
Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 21/162 (12%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
++++ GA+G IG + + N L+ + L L + GV ++
Sbjct: 2 KVAVLGASGGIGQPLSLLLKNSPLVSR-----LTLYDI------AHTPGVAADLSHIETR 50
Query: 67 LLVDVSVH-ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
V + E K ++ ++ PRK M R +L N++I A
Sbjct: 51 ATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACA-QHCP 109
Query: 126 DVKVLVVGNPVNTNTYITMKSAPDLSYKNFTAMLRLDHNRAI 167
D + ++ NPVN+ IT + F + N+
Sbjct: 110 DAMICIISNPVNSTIPIT--------AEVFKKHGVYNPNKIF 143
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 82.6 bits (203), Expect = 1e-19
Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 160 RLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNN---S 216
LD R +A +N S+ ++ G H + +P + +A + GV I + + +
Sbjct: 2 SLDTARFRQSIAEMVNVDARSVH-AYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60
Query: 217 FWNKNVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTEN-WVTMGIPSDGSY 275
+ EII ++GA+ A + I I EN + + + DG Y
Sbjct: 61 EDKLVKMFEDVRDAAYEIIKLKGATFYGIATAL--ARISKAILNDENAVLPLSVYMDGQY 118
Query: 276 NVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEI 321
+ D+ G P I + + I + + + + S +LK +
Sbjct: 119 GIN-DLYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVL 163
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 76.7 bits (188), Expect = 8e-18
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+++I GA+G++G +A + I + S ++G+ +I D +
Sbjct: 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLI-------GREHSINKLEGLREDIYDALAG 54
Query: 67 LLVDVSVH---ENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
D +++ + + ++++ I+ PRK M R +L N+ I + K + +
Sbjct: 55 TRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC 114
Query: 124 SRDVKVLVVGNPVNTNTYITMK 145
D K+ V+ NPV+ TY +
Sbjct: 115 --DTKIFVITNPVDVMTYKALV 134
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 75.1 bits (184), Expect = 3e-17
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+I++ GA G +G FR+A + + +L+ + K + M +
Sbjct: 2 KITVIGA-GNVGATTAFRLAE-------KQLARELVLLDVVEGIPQGKALDMYESGPVGL 53
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
V N +++I I+ PRK M R +LL N+ I E + + +
Sbjct: 54 FDTKV-TGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK-N 111
Query: 127 VKVLVVGNPVNTNTYITMKSAPDLSYKNFTAM 158
++VV NP++ T++ + L + M
Sbjct: 112 PIIIVVSNPLDIMTHVAWVRS-GLPKERVIGM 142
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 73.1 bits (179), Expect = 2e-16
Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 9/139 (6%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
++S+ GAAG +G + IA D+ + + ++ +K+ G + I
Sbjct: 2 KVSVVGAAGTVGAAAGYNIALRDIADE-----VVFVDIPDKE--DDTVGQAADTNHGI-A 53
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
+ V + +++ ++ PR+ R +L N+ I + +L+ D
Sbjct: 54 YDSNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-D 112
Query: 127 VKVLVVGNPVNTNTYITMK 145
L NPV+ +
Sbjct: 113 YISLTTSNPVDLLNRHLYE 131
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 65.5 bits (159), Expect = 1e-13
Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 15/143 (10%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+I I G G +G + + + ++A+ K +K ++ +D +
Sbjct: 3 KIGIIGL-GNVGAAVAHGLIAQGVAD-----DYVFIDANEAK----VKADQIDFQDAMAN 52
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSN----MERSELLAINSSIFIEQGKALNSV 122
L ++ N A DA++ I + +R L SS+ G L
Sbjct: 53 LEAHGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112
Query: 123 ASRDVKVLVVGNPVNTNTYITMK 145
++V+ NPV+ T +
Sbjct: 113 GF-HGVLVVISNPVDVITALFQH 134
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 64.7 bits (157), Expect = 2e-13
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 12/140 (8%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
++ GA G++G F + + + L++ + + G M++
Sbjct: 2 KLGFVGA-GRVGSTSAFTCLLNLDVDE-----IALVDIAEDLAV----GEAMDLAHAAAG 51
Query: 67 LLVD-VSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
+ V + K + I ++ RK M R +L N+ I + K + A
Sbjct: 52 IDKYPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP- 110
Query: 126 DVKVLVVGNPVNTNTYITMK 145
+ K+LVV NP++ TYI K
Sbjct: 111 ESKILVVTNPMDVMTYIMWK 130
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 61.6 bits (149), Expect = 2e-12
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 12/141 (8%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+I I G G++G + F + + L++ K+++ P
Sbjct: 2 KIGIVGL-GRVGSSTAFALLMKGF-----AREMVLIDVDKKRAEG-----DALDLIHGTP 50
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
+++ K +++ I+ P+K R +LL N+ + E + ++ A D
Sbjct: 51 FTRRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-D 109
Query: 127 VKVLVVGNPVNTNTYITMKSA 147
V+VV NPV+ TY +K +
Sbjct: 110 SIVIVVTNPVDVLTYFFLKES 130
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 60.8 bits (147), Expect = 4e-12
Identities = 23/141 (16%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 5 PVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCI 64
P ++++ GA G +G + F A + + + L + + ++ + +++++
Sbjct: 1 PTKLAVIGA-GAVGSTLAFAAAQRGIARE-----IVLEDIAKERVEA----EVLDMQHGS 50
Query: 65 FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVAS 124
+ +DA++ ++ +K R EL+ +I L VA
Sbjct: 51 SFYPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAP 110
Query: 125 RDVKVLVVGNPVNTNTYITMK 145
+ +++ NPV+ T++ K
Sbjct: 111 -NAIYMLITNPVDIATHVAQK 130
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 57.3 bits (138), Expect = 7e-11
Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 2 LKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE 61
+ ++ + G G +G + F +A + + +++ +++ +++E
Sbjct: 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEE-----FVIVDVVKDRTKGDA----LDLE 51
Query: 62 DCIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNS 121
D ++ + KDA++ ++ P+K R +L+ N +I K +
Sbjct: 52 DAQ-AFTAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVD 110
Query: 122 VASRDVKVLVVGNPVNTNTYITMK 145
D LV NPV+ TY T K
Sbjct: 111 SGF-DGIFLVAANPVDILTYATWK 133
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 57.4 bits (138), Expect = 8e-11
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
R+ + GA G +G + +F + N + D+ +++ ++ G M+
Sbjct: 8 RVVVIGA-GFVGASYVFALMNQGIA--DEIVLI-------DANESKAIGDAMDFNHGKVF 57
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
V + +DA++ ++ +K R +L+ N +IF +++ + +
Sbjct: 58 APKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMA-SGFQ 116
Query: 127 VKVLVVGNPVNTNTYITMK 145
LV NPV+ TY T K
Sbjct: 117 GLFLVATNPVDILTYATWK 135
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 57.4 bits (138), Expect = 1e-10
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 11/139 (7%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+I++ G GQ+G I L + L L++ K + +M+++
Sbjct: 22 KITVVGV-GQVGMACAISILGKSLADE-----LALVDVLEDKLKG----EMMDLQHGSLF 71
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
L V + + ++ I ++ ++ R L+ N ++F + S D
Sbjct: 72 LQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVK-YSPD 130
Query: 127 VKVLVVGNPVNTNTYITMK 145
++VV NPV+ TY+T K
Sbjct: 131 CIIIVVSNPVDILTYVTWK 149
>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 152
Score = 56.5 bits (136), Expect = 2e-10
Identities = 28/165 (16%), Positives = 66/165 (40%), Gaps = 19/165 (11%)
Query: 161 LDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRYATVNGVLIRDMINNNSFWNK 220
LD R +L N +I++ ++ G H SM+ A +G + + + N+
Sbjct: 4 LDSQRLKERLY---NAGARNIRRAWIIGEHGDSMFVAKSLADFDGEVDWEAVEND----- 55
Query: 221 NVFLPAISRRGEEIISIRGASSAASAASAAIDHIKDWIFGTENWV-TMGIPSDGSYNVPK 279
+ E+I +GA+ A AI + + + + G Y + +
Sbjct: 56 ------VRFVAAEVIKRKGATIFGPA--VAIYRMVKAVVEDTGEIIPTSMILQGEYGI-E 106
Query: 280 DIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSI 324
++ G P K+ + ++ ++++ +K+ S + L+ + +
Sbjct: 107 NVAVGVPAKLGKNGAEVA-DIKLSDEEIEKLRNSAKILRERLEEL 150
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 55.0 bits (132), Expect = 5e-10
Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 11/142 (7%)
Query: 4 KPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDC 63
+I++ G G +G I K L L++A K ++G ++++
Sbjct: 18 SRCKITVVGV-GDVGMACAISILL-----KGLADELALVDADTDK----LRGEALDLQHG 67
Query: 64 IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
L V ++ + I+ S R +LL N +I + +
Sbjct: 68 SLFLSTPKIVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS 127
Query: 124 SRDVKVLVVGNPVNTNTYITMK 145
D K++VV NPV+ TY+ K
Sbjct: 128 P-DCKIIVVTNPVDILTYVVWK 148
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 53.1 bits (127), Expect = 2e-09
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+++I GA G +G + F +A + L L++ +K+ G M+I + P
Sbjct: 3 KVAIIGA-GFVGASAAFTMALRQTANE-----LVLIDVFKEKA----IGEAMDINHGL-P 51
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASRD 126
+ +S++ + KD ++ ++ RK R +L N I E +
Sbjct: 52 FMGQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQN-IMKYYNH 110
Query: 127 VKVLVVGNPVNTNTYITMK 145
+LVV NPV+ TY+ K
Sbjct: 111 GVILVVSNPVDIITYMIQK 129
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 50.4 bits (120), Expect = 2e-08
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+ISI GA G +G +A +L + LL+ Q G +++ +
Sbjct: 3 KISIIGA-GFVGSTTAHWLAAKEL------GDIVLLDIVEGVPQ----GKALDLYEASPI 51
Query: 67 LLVDVSV-HENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVASR 125
DV V N ++++ ++ PRK M R +L+ +N+ I ++
Sbjct: 52 EGFDVRVTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSP- 110
Query: 126 DVKVLVVGNPVNTNTYITMK 145
+ +++V NP++ TY+ +
Sbjct: 111 NAVIIMVNNPLDAMTYLAAE 130
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 47.8 bits (113), Expect = 2e-07
Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 15/150 (10%)
Query: 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
++++ ++++ G+ G IG + + A +L + L + + K + +
Sbjct: 3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELAD------VVLYDVVKGMPE--GKALDLSH 53
Query: 61 EDCIFPLLVDVSVHENPITAFKDANIAILIGSFPRK-----SNMERSELLAINSSIFIEQ 115
+ V V + A A+ I+ + S R++LL NS I E
Sbjct: 54 VTSVVDTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREI 113
Query: 116 GKALNSVASRDVKVLVVGNPVNTNTYITMK 145
G+ + ++VV NP++ + +
Sbjct: 114 GQNIKKY-CPKTFIIVVTNPLDCMVKVMCE 142
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 41.9 bits (98), Expect = 2e-05
Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 23/171 (13%)
Query: 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIED 62
KK I I G I+ L ++ I +L N K ++ ++
Sbjct: 1 KKSFSIVIAGGGSTFTPGIVL----MLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFI 56
Query: 63 CIFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKA---- 118
++ + +P AF D + + + + E + + + ++
Sbjct: 57 REKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGI 116
Query: 119 ---------LNSVASRDVK------VLVVGNPVNTNTYITMKSAPDLSYKN 154
+ + K +L NP T + P+ N
Sbjct: 117 AYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNSKILN 167
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 39.3 bits (91), Expect = 2e-04
Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
+I + G+ G IG + I +L ++L + + +
Sbjct: 5 KIVLVGS-GMIGGVMATLIVQKNL----GDVVLF-----DIVKNMPHGKALDTSHTNVMA 54
Query: 67 LLVDVSVHENPITAFKDANIAILIGSFPRK-----SNMERSELLAINSSIFIEQGKALNS 121
N A++ I+ F + R +LL +N+ I IE G +
Sbjct: 55 YSNCKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK 114
Query: 122 VASRDVKVLVVGNPVNTNTYITMK 145
+ ++VV NPV+ + +
Sbjct: 115 NCP-NAFIIVVTNPVDVMVQLLHQ 137
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 39.3 bits (91), Expect = 2e-04
Identities = 18/163 (11%), Positives = 45/163 (27%), Gaps = 29/163 (17%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPII--LQLLEASNKKSQKAIKGVIMEIEDCI 64
RI++ G G + + G L + I + + +K + ++++ +
Sbjct: 2 RIAVIGG-GSSYTPELVK---GLLDISEDVRIDEVIFYDIDEEK-----QKIVVDFVKRL 52
Query: 65 FPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA- 123
V + + A DA I E E + + + ++ + +
Sbjct: 53 VKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSA 112
Query: 124 -----------------SRDVKVLVVGNPVNTNTYITMKSAPD 149
+ + ++ NP T
Sbjct: 113 ALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEY 155
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 35.0 bits (80), Expect = 0.004
Identities = 16/165 (9%), Positives = 46/165 (27%), Gaps = 25/165 (15%)
Query: 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPII--LQLLEASNKKSQKAIKGVIMEIEDC 63
++I+ G G + G + + + L L++ K + I G + +
Sbjct: 2 LKIATIGG-GSSYTPELVE---GLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVE 57
Query: 64 IFPLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAINSSIFIEQGKALNSVA 123
+ +++ + + A A+ + E + + + ++ +
Sbjct: 58 KAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLF 117
Query: 124 SR-------------------DVKVLVVGNPVNTNTYITMKSAPD 149
D ++ NP T ++
Sbjct: 118 KGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ 162
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 341
Score = 31.1 bits (69), Expect = 0.18
Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 1 MLKKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
+ +P ITG AG IG N++ + D + + L ++++ ++ ++ E
Sbjct: 12 LPAQPKVWLITGVAGFIGSNLLETLLKLD----QKVVGLDNFATGHQRNLDEVRSLVSEK 67
Query: 61 EDCIFPLL 68
+ F +
Sbjct: 68 QWSNFKFI 75
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Escherichia coli [TaxId:
562]}
Length = 338
Score = 30.3 bits (67), Expect = 0.28
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 7 RISITGAAGQIGYNIIFR-IANG------DLLGKDQPIILQLLEASNKKSQKAIKGVIME 59
R+ +TG +G IG + + + NG D L + +L ++E K ++G I
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61
Query: 60 IEDC 63
Sbjct: 62 EALM 65
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 30.1 bits (66), Expect = 0.37
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Query: 7 RISITGAAGQIGYNII---------FRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVI 57
RI + GA G IG ++ + + QLLE+ + G I
Sbjct: 5 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64
Query: 58 MEIEDCIFPLLVDVSVH 74
+ + + V
Sbjct: 65 DDHASLVEAVKNVDVVI 81
>d1t4za_ c.47.1.15 (A:) Adaptive-response sensory-kinase SasA,
N-terminal domain {Synechococcus elongatus [TaxId:
32046]}
Length = 105
Score = 28.2 bits (63), Expect = 0.43
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 32 GKDQPIILQLLEASNKKSQKAIKGV--IMEIEDCIFPLLVDVS-VHENPITAFKDANIAI 88
QP++LQL + SQ ++ V I+ + P+ + V V + P +
Sbjct: 8 ALAQPLLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVT 67
Query: 89 --LIGSFP 94
L+ P
Sbjct: 68 PALVKIGP 75
>d1llna_ d.165.1.1 (A:) Antiviral protein 3 {Pokeweed (Phytolacca
americana) [TaxId: 3527]}
Length = 262
Score = 29.2 bits (65), Expect = 0.66
Identities = 11/60 (18%), Positives = 18/60 (30%)
Query: 267 MGIPSDGSYNVPKDIIFGFPVKIKNSKYKIIQNLEIDKFSRKKINLSIEELKNEILSISH 326
SD V + K + +E +R K+ L LK+ + I
Sbjct: 87 KDSESDAQETVCPGDKSKPGTQNNIPYEKSYKGMESKGGARTKLGLGKITLKSRMGKIYG 146
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 29.0 bits (63), Expect = 0.73
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 3 KKPVRISITGAAGQIGYNII 22
K R+ I G G IG I+
Sbjct: 1 DKKSRVLIVGGTGYIGKRIV 20
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 347
Score = 28.9 bits (63), Expect = 0.81
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 7/63 (11%)
Query: 8 ISITGAAGQIGYNII-------FRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEI 60
+ +TG AG IG + + + D L + LE K + + +
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63
Query: 61 EDC 63
+
Sbjct: 64 KGL 66
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA
(PrmI) {Escherichia coli [TaxId: 562]}
Length = 342
Score = 28.8 bits (62), Expect = 0.85
Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFP 66
R+ I G G IG ++ R+ + L + + + +E + I
Sbjct: 2 RVLILGVNGFIGNHLTERLLR---EDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS 58
Query: 67 LLVDVSVHE 75
++ V +
Sbjct: 59 EWIEYHVKK 67
>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase
(RmlD) {Salmonella enterica serovar typhimurium [TaxId:
90371]}
Length = 298
Score = 28.8 bits (62), Expect = 0.88
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
I + G GQ+G+ + +A
Sbjct: 2 NILLFGKTGQVGWELQRSLAP 22
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 28.6 bits (62), Expect = 0.88
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
+ +TGA+G+ G + ++
Sbjct: 5 TVLVTGASGRTGQIVYKKLKE 25
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 281
Score = 28.6 bits (62), Expect = 0.94
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
+I ITGA GQ+G I ++
Sbjct: 3 KILITGANGQLGREIQKQLKG 23
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 28.1 bits (61), Expect = 1.3
Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Query: 1 MLKKPVRISITGAAGQIGYNII 22
M K +I+I GA GQ G +
Sbjct: 1 MAVK--KIAIFGATGQTGLTTL 20
>d1ihma_ b.121.4.3 (A:) Calicivirus capsid protein {Norwalk virus
[TaxId: 11983]}
Length = 492
Score = 28.3 bits (63), Expect = 1.5
Identities = 12/55 (21%), Positives = 21/55 (38%)
Query: 240 ASSAASAASAAIDHIKDWIFGTENWVTMGIPSDGSYNVPKDIIFGFPVKIKNSKY 294
SS A A + ++ I WI G + N P D++F + + +
Sbjct: 10 GSSTAVATAGQVNPIDPWIINNFVQAPQGEFTISPNNTPGDVLFDLSLGPHLNPF 64
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 28.1 bits (61), Expect = 1.5
Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 1 MLKKPVRISITGAAGQIGYNIIFRIAN 27
M +K + +TG AG IG + + +
Sbjct: 1 MAEK---VLVTGGAGYIGSHTVLELLE 24
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 27.9 bits (61), Expect = 1.7
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 7 RISITGAAGQIGYNIIFRI--ANGDLLGKDQPIILQLLEASNKKS 49
R+ +TG AG IG + + ++ + D+ I+L L + ++
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA 46
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 356
Score = 27.9 bits (60), Expect = 1.7
Identities = 5/21 (23%), Positives = 9/21 (42%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
R+ +TG G G + +
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQT 30
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase
{Escherichia coli [TaxId: 562]}
Length = 307
Score = 28.1 bits (60), Expect = 1.7
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 8 ISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
I +TG AG IG NI+ + + G +++ L+ K + ++ F
Sbjct: 2 IIVTGGAGFIGSNIVKALND---KGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF 56
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 363
Score = 28.0 bits (61), Expect = 1.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1 MLKKPVRISITGAAGQIGYNIIFRIAN 27
+ ++ISITGA G I +I R+ +
Sbjct: 11 WPSENLKISITGAGGFIASHIARRLKH 37
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 393
Score = 28.0 bits (60), Expect = 1.9
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
R+ + G G G+ ++
Sbjct: 3 RVMVIGGDGYCGWATALHLSK 23
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 27.7 bits (61), Expect = 2.0
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKG 55
+K RI ITG AG +G ++ ++ + ++ K++ + G
Sbjct: 1 RK--RILITGGAGFVGSHLTDKLMMDG----HEVTVVDNFFTGRKRNVEHWIG 47
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase)
{Escherichia coli [TaxId: 562]}
Length = 315
Score = 27.5 bits (60), Expect = 2.2
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 10/90 (11%)
Query: 3 KKPVRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIE- 61
K+ R+ I G G +G I ++ D ++L+ + N +A+
Sbjct: 2 KQ--RVFIAGHRGMVGSAIRRQLEQ----RGDVELVLRTRDELNLLDSRAVHDFFASERI 55
Query: 62 DCIFPLLVDVSVH---ENPITAFKDANIAI 88
D ++ V F N+ I
Sbjct: 56 DQVYLAAAKVGGIVANNTYPADFIYQNMMI 85
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia
coli [TaxId: 562]}
Length = 357
Score = 27.5 bits (60), Expect = 2.2
Identities = 13/77 (16%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Query: 10 ITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIFPLLV 69
ITG GQ G + + G + I + + N + I
Sbjct: 6 ITGVTGQDGSYLAEFLLE---KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 70 DVSVHENPITAFKDANI 86
D+S N ++
Sbjct: 63 DLSDTSNLTRILREVQP 79
>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId:
5691]}
Length = 383
Score = 27.4 bits (59), Expect = 2.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 7 RISITGAAGQIGYNII 22
R+ + G AG IG + +
Sbjct: 4 RVLVCGGAGYIGSHFV 19
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 346
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 7 RISITGAAGQIGYNIIFRIANGDLLGKDQPIIL--QLLEASNKKSQKAIKG 55
I +TG AG IG N + + N D + + +L A NK + +AI G
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYN---NHPDVHVTVLDKLTYAGNKANLEAILG 51
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi
[TaxId: 90370]}
Length = 338
Score = 27.4 bits (59), Expect = 2.8
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
++ ITG G +G N+ +
Sbjct: 2 KLLITGGCGFLGSNLASFALS 22
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 27.0 bits (59), Expect = 2.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
+I ITG AG IG ++ I
Sbjct: 2 KILITGGAGFIGSAVVRHIIK 22
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 26.3 bits (57), Expect = 4.0
Identities = 20/169 (11%), Positives = 44/169 (26%), Gaps = 31/169 (18%)
Query: 6 VRISITGAAGQIGYNIIFRIANGDLLGKDQPIILQLLEASNKKSQKAIKGVIMEIEDCIF 65
V+I I GA G +++ DL + + + I +
Sbjct: 3 VKIGIIGA-GSAVFSLRL---VSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV 58
Query: 66 PLLVDVSVHENPITAFKDANIAILIGSFPRKSNMERSELLAI------------------ 107
+ N DA+ I + +E+ +
Sbjct: 59 GADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSD 118
Query: 108 --------NSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP 148
F++ + + ++ L NP+ T + ++ P
Sbjct: 119 YYTFSNYNQLKYFVDIARKIEKLSP-KAWYLQAANPIFEGTTLVTRTVP 166
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 212
Score = 26.3 bits (56), Expect = 4.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 5 PVRISITGAAGQIGYNIIFRIAN 27
P R+ + GA G G +++ RI +
Sbjct: 2 PKRVLLAGATGLTGEHLLDRILS 24
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 321
Score = 26.5 bits (57), Expect = 5.2
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 7 RISITGAAGQIGYNIIFRIAN 27
+TG GQ G + +
Sbjct: 2 SALVTGITGQDGAYLAKLLLE 22
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 26.6 bits (57), Expect = 5.2
Identities = 7/20 (35%), Positives = 9/20 (45%), Gaps = 2/20 (10%)
Query: 3 KKPVRISITGAAGQIGYNII 22
+K ITG GQ G +
Sbjct: 1 RK--IALITGITGQDGSYLT 18
>d1oxja1 a.60.1.2 (A:594-655) RNA-binding protein Smaug {Drosophila
melanogaster [TaxId: 7227]}
Length = 62
Score = 24.5 bits (53), Expect = 5.5
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 297 IQNLEIDKFSRKKINLSIEELK 318
+Q++ + K + K+ L I++LK
Sbjct: 40 LQSVGVTKGASHKLALCIDKLK 61
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 26.3 bits (56), Expect = 5.8
Identities = 4/16 (25%), Positives = 10/16 (62%)
Query: 7 RISITGAAGQIGYNII 22
+ +TGA G + +++
Sbjct: 13 LVLVTGANGFVASHVV 28
>d1hhsa_ e.8.1.6 (A:) dsRNA phage RNA-dependent RNA-polymerase
{Bacteriophage PHI-6 [TaxId: 10879]}
Length = 664
Score = 26.1 bits (57), Expect = 7.1
Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 20/134 (14%)
Query: 92 SFPRKSNMERSELLAINSSIFIEQGKALNSVASRDVKVLVVGNPVNTNTYITMKSAP--- 148
++P SN+++ + E+ L A R L+ + I S+
Sbjct: 99 TWPLASNLKKRADADLADGPVSERDNLLFRAAVR----LMFSDLEPVPLKIRKGSSTCIP 154
Query: 149 ----DLSYKNFTAMLRLDHNRAIAKLASKLNEPVSSIKKVFVWGNHSLSMYPDYRY---- 200
D+ K A L+ L + + + Y YR
Sbjct: 155 YFSNDMGTKIEIAERALEKAEEAGNLMLQ-----GKFDDAYQLHQMGGAYYVVYRAQSTD 209
Query: 201 ATVNGVLIRDMINN 214
A ++
Sbjct: 210 AITLDPKTGKFVSK 223
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 25.7 bits (55), Expect = 8.9
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 10 ITGAAGQIGYNIIFRIAN 27
ITG GQ G + +
Sbjct: 6 ITGITGQDGSYLAEFLLE 23
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.381
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,203,708
Number of extensions: 56839
Number of successful extensions: 342
Number of sequences better than 10.0: 1
Number of HSP's gapped: 282
Number of HSP's successfully gapped: 87
Length of query: 329
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 243
Effective length of database: 1,226,816
Effective search space: 298116288
Effective search space used: 298116288
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.6 bits)