BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9583
(866 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/479 (45%), Positives = 313/479 (65%), Gaps = 10/479 (2%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALL 447
++ FDV+VIGAGPGGYVA+IR AQLG KTACI+++ E ALGGTC NVGCIPSKALL
Sbjct: 1 SQKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL 60
Query: 448 QTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGH 507
+S+ + K +F +GI + VT+++ M+ R G GH
Sbjct: 61 DSSYKYHEAKEAFKVHGIEAKGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEGH 120
Query: 508 AIFTGKIQNNFH-EIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEM 566
GK+ N E+ ++ + + A+ +IIA+GS+ P +++I+ + GALE
Sbjct: 121 ----GKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEF 176
Query: 567 INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626
VPKKL +IGAGVIGLE+GS+W RLG+EVT+LE FL DE+IAK+A +L KQGL
Sbjct: 177 QAVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGL 236
Query: 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIG 686
NI L ++ ++ K+ V + +++ + K FDKL++A+GR P T +L G
Sbjct: 237 NIRLGARVTASEVKKKQVTVTFTDANGEQK-----ETFDKLIVAVGRRPVTTDLLAADSG 291
Query: 687 LKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNA 746
+ ++E FI V+D+C+T++P ++AIGDVVRG MLAHKA EEG+MVAE I+G K +N++
Sbjct: 292 VTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDL 351
Query: 747 LPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSD 806
+P VIYT PEIA VGKTEQ LK + NVG FPF A+ RA +T+G+VK+++D K+D
Sbjct: 352 IPSVIYTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTD 411
Query: 807 EILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865
+LG+H+IGP A+EL+ + I +EF S+ED+ + HP+LSEA+ EAA+++ +I+
Sbjct: 412 RVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIH 470
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/479 (44%), Positives = 309/479 (64%), Gaps = 10/479 (2%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALL 447
++ FDVIVIGAGPGGYVA+I+ AQLG KTA I+++K E ALGGTC NVGCIPSKALL
Sbjct: 1 SQKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALL 60
Query: 448 QTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGH 507
+S+ F SF +GI+T V +++ M+ R G GH
Sbjct: 61 DSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH 120
Query: 508 A-IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEM 566
+ GK E+ + + + + + +I+A+GSK P D+++I+ + GAL+
Sbjct: 121 GKLLAGKKV----EVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDF 176
Query: 567 INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626
NVP KL +IGAGVIGLE+GS+W RLG+EVT+LE FL VDE++AK+A +L KQGL
Sbjct: 177 QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGL 236
Query: 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIG 686
I+L ++ ++ + V + + + + FDKL++A+GR P T +L G
Sbjct: 237 KILLGARVTGTEVKNKQVTVKFVDAEGEK-----SQAFDKLIVAVGRRPVTTDLLAADSG 291
Query: 687 LKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNA 746
+ ++E FI V+D C T++P +YAIGDVVRG MLAHKA EEG++VAE I+G K +N++
Sbjct: 292 VTLDERGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDL 351
Query: 747 LPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSD 806
+P VIYT PEIA VGKTEQ LK ++ NVG+FPF A+ RA +T+G VK+++D K+D
Sbjct: 352 IPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTD 411
Query: 807 EILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865
+LG+H+IGP A+EL+ + IA+EF S+ED+ + HP+LSEA+ EAA+++ +I+
Sbjct: 412 RVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALAVSGHAIH 470
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/478 (46%), Positives = 298/478 (62%), Gaps = 14/478 (2%)
Query: 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSH 451
DV VIG+GPGGYVA+I+ AQLGFKT CI E+N LGGTC NVGCIPSKALL SH
Sbjct: 8 DVTVIGSGPGGYVAAIKAAQLGFKTVCI------EKNETLGGTCLNVGCIPSKALLNNSH 61
Query: 452 SFENVKNS-FFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIF 510
+ + F GI V LNL KM+E+ G +G+
Sbjct: 62 YYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKI 121
Query: 511 TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVP 570
TGK Q + + + I K I+IATGS+ FPG+ DE+ I+S+ GAL + VP
Sbjct: 122 TGKNQVTATKA---DGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVP 178
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKKAFHLLNKQGLNII 629
+K+ +IGAGVIG+E+GS+W+RLG++VT +E + +D EI+K +L KQG
Sbjct: 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFK 238
Query: 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
LNTK+ + + ++ K E+IT D LL+ IGR P T NL ++++G+++
Sbjct: 239 LNTKVTGATKKSDGKIDVSIEAASGGKAEVITC--DVLLVCIGRRPFTKNLGLEELGIEL 296
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPF 749
+ I VN +T IPNIYAIGDVV GPMLAHKAE+EGI+ E ++G I++N +P
Sbjct: 297 DPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPS 356
Query: 750 VIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEIL 809
VIYT PE+A VGK+E+ LK+ I Y VG FPF ANSRA+ +T GMVKIL +D +L
Sbjct: 357 VIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVL 416
Query: 810 GIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE-NRSINY 866
G HI+GP A E++ EA +A+E+ AS EDIAR+CH HP+LSEA +EA ++ +SIN+
Sbjct: 417 GAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/474 (44%), Positives = 310/474 (65%), Gaps = 12/474 (2%)
Query: 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSH 451
DV++IG GPGGYVA+I+ AQLGFKT CI E+ ALGGTC NVGCIPSKALL +SH
Sbjct: 8 DVVIIGGGPGGYVAAIKAAQLGFKTTCI------EKRGALGGTCLNVGCIPSKALLHSSH 61
Query: 452 SFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIFT 511
+ K+SF +G+ NV ++L M+ + G G+ F
Sbjct: 62 MYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF- 120
Query: 512 GKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPK 571
+ + + I + K+IIIATGS +S PGV DE I+S+ GAL + +PK
Sbjct: 121 --VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPK 178
Query: 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILN 631
KL +IGAG IGLE+GS+W R+GSEVT++E +S + T+D EI K+ L KQG+ L
Sbjct: 179 KLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLK 238
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNE 691
TK+ + + + V + + +T II + D +L++ GR P T+ LN+DKIG++ ++
Sbjct: 239 TKVVGVDTSGDGVKLTVEPSAGGEQT-IIEA--DVVLVSAGRTPFTSGLNLDKIGVETDK 295
Query: 692 NNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVI 751
I+VN+ TN+ +YAIGDV+ GPMLAHKAEE+G+ E+++G+ ++++ +P V+
Sbjct: 296 LGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVV 355
Query: 752 YTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGI 811
YT PE+ASVGKTE+ +K+ + Y VG FPF+ANSRA+ + G+VKI+++ ++D+ILG+
Sbjct: 356 YTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGV 415
Query: 812 HIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865
HI+ P A ELI EA IA+++ ASSEDIAR+CH HP++SEA+KEAAM+ ++ I+
Sbjct: 416 HIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIH 469
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/478 (46%), Positives = 297/478 (62%), Gaps = 14/478 (2%)
Query: 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSH 451
DV VIG+GPGGYVA+I+ AQLGFKT CI E+N LGGTC NVGCIPSKALL SH
Sbjct: 8 DVTVIGSGPGGYVAAIKAAQLGFKTVCI------EKNETLGGTCLNVGCIPSKALLNNSH 61
Query: 452 SFENVKN-SFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIF 510
+ F GI V LNL KM+E+ G +G+
Sbjct: 62 YYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKI 121
Query: 511 TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVP 570
TGK Q + + + I K I+IATGS+ FPG+ DE+ I+S+ GAL + VP
Sbjct: 122 TGKNQVTATKA---DGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVP 178
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKKAFHLLNKQGLNII 629
+K+ +IGAGVIG+E+GS+W+RLG++VT +E + +D EI+K +L KQG
Sbjct: 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFK 238
Query: 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
LNTK+ + + ++ K E+IT D LL+ IGR P T NL ++++G+++
Sbjct: 239 LNTKVTGATKKSDGKIDVSIEAASGGKAEVITC--DVLLVCIGRRPFTKNLGLEELGIEL 296
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPF 749
+ I VN +T IPNIYAIGDVV GPMLAHKAE+EGI+ E ++G I++N +P
Sbjct: 297 DPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPS 356
Query: 750 VIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEIL 809
VIYT PE+A VGK+E+ LK+ I Y VG FPF ANSRA+ +T GMVKIL +D +L
Sbjct: 357 VIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVL 416
Query: 810 GIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE-NRSINY 866
G HI+GP A E++ EA +A+E+ AS EDIAR+CH HP+LSEA +EA ++ +SIN+
Sbjct: 417 GAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/478 (46%), Positives = 297/478 (62%), Gaps = 14/478 (2%)
Query: 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSH 451
DV VIG+GPGGYVA+I+ AQLGFKT CI E+N LGGTC NVGCIPSKALL SH
Sbjct: 29 DVTVIGSGPGGYVAAIKAAQLGFKTVCI------EKNETLGGTCLNVGCIPSKALLNNSH 82
Query: 452 SFENVKN-SFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIF 510
+ F GI V LNL KM+E+ G +G+
Sbjct: 83 YYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKI 142
Query: 511 TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVP 570
TGK Q + + + I K I+IATGS+ FPG+ DE+ I+S+ GAL + VP
Sbjct: 143 TGKNQVTATKA---DGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVP 199
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKKAFHLLNKQGLNII 629
+K+ +IGAGVIG+E+GS+W+RLG++VT +E + +D EI+K +L KQG
Sbjct: 200 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFK 259
Query: 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
LNTK+ + + ++ K E+IT D LL+ IGR P T NL ++++G+++
Sbjct: 260 LNTKVTGATKKSDGKIDVSIEAASGGKAEVITC--DVLLVCIGRRPFTKNLGLEELGIEL 317
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPF 749
+ I VN +T IPNIYAIGDVV GPMLAHKAE+EGI+ E ++G I++N +P
Sbjct: 318 DPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPS 377
Query: 750 VIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEIL 809
VIYT PE+A VGK+E+ LK+ I Y VG FPF ANSRA+ +T GMVKIL +D +L
Sbjct: 378 VIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVL 437
Query: 810 GIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE-NRSINY 866
G HI+GP A E++ EA +A+E+ AS EDIAR+CH HP+LSEA +EA ++ +SIN+
Sbjct: 438 GAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 495
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/467 (42%), Positives = 287/467 (61%), Gaps = 20/467 (4%)
Query: 405 ASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYG 464
ASI+ AQLG KTAC+ E+ ALGGTC NVGCIPSKALL +H + + +F YG
Sbjct: 17 ASIKAAQLGMKTACV------EKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYG 70
Query: 465 I-NTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQI 523
+ + VT++ KM ++ G G F H I++
Sbjct: 71 LMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF-----ETAHSIRV 125
Query: 524 --INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVI 581
++ +E + K IIATGS+ P + FDE ++LS+ GAL + VPK + +IG GVI
Sbjct: 126 NGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVI 185
Query: 582 GLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-QGLNIILNTKIHDIKIN 640
GLE+GS+W RLG+EVT++E + T+DE++ L K + + + +TK+ N
Sbjct: 186 GLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNN 245
Query: 641 KENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDN 700
++V + K N K E +T + LL+++GR P T L +DKI + NE F+ + D+
Sbjct: 246 GDSVSLEVEGK--NGKRETVTC--EALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDH 301
Query: 701 CETNIPNIYAIGDVV-RGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIAS 759
ET+IP++YAIGDVV +GPMLAHKAE+EG+ AE ++G+ +N+ +P VIYT PE+AS
Sbjct: 302 FETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVAS 361
Query: 760 VGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMAS 819
VGK+E LKK ++Y VG FPF ANSRA+ + G VK+L D +D ILG+HI+ A
Sbjct: 362 VGKSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAG 421
Query: 820 ELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSINY 866
ELI EA +A+E+ ASSED+ R CH HP++SEA+KEA M++ ++IN+
Sbjct: 422 ELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALFAKTINF 468
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/475 (40%), Positives = 278/475 (58%), Gaps = 22/475 (4%)
Query: 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTS 450
+D++VIGAGPGGYVA+IR AQLG K +++ K ALGGTC VGCIPSKALL+T+
Sbjct: 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK------ALGGTCLRVGCIPSKALLETT 55
Query: 451 HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIF 510
K G + V L+L ++ G G A F
Sbjct: 56 ERIYEAKKGLL--GAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF 113
Query: 511 TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVP 570
+ + ++ +T E + A+YI+IATGS P + D ++++ AL VP
Sbjct: 114 LSERKV------LVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVP 167
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL 630
K+L ++G GVIGLE+G +W RLG+EV +LE L T+D E+++ A + KQGL I
Sbjct: 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRT 227
Query: 631 NTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN 690
++ + + + E++ + D++L+A+GR P T L+++ GL +
Sbjct: 228 GVRVTAVVPEAKGARVELEG------GEVLEA--DRVLVAVGRRPYTEGLSLENAGLSTD 279
Query: 691 ENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFV 750
E I V+++ T +P+IYAIGDVVRGPMLAHKA EEGI EH+ +++ A+P V
Sbjct: 280 ERGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSV 339
Query: 751 IYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILG 810
+YT PEIA+VG TE+ LK I Y VG FP+ A+ RAR +GET G +K+L+ K+D ILG
Sbjct: 340 VYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILG 399
Query: 811 IHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865
+H IG +++AEA +A+ F+AS+ED+ R H HPSLSE +KEAA++ R I+
Sbjct: 400 VHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAALAAWERPIH 454
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/489 (42%), Positives = 297/489 (60%), Gaps = 23/489 (4%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKAL 446
+NK+ DV++IG GP GYVA+I+ AQLGF TAC+ E+ LGGTC NVGCIPSKAL
Sbjct: 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACV------EKRGKLGGTCLNVGCIPSKAL 55
Query: 447 LQTSHSFENVKNSFFEYGINTQ-NVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXH 505
L SH F + + GI+ ++ +N+ + G
Sbjct: 56 LNNSHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYK 115
Query: 506 GHAIFTGKIQNNFHEIQIINKT-KET--ITAKYIIIATGSKARSFPGVKFDENLILSNKG 562
G+ F + + + + T KE + K II+ATGS+ FPG++ DE I+S+ G
Sbjct: 116 GNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIEIDEEKIVSSTG 175
Query: 563 ALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622
AL + +PK+L IIG G+IGLE+GS++ RLGS+VT++E ++D E+AK L
Sbjct: 176 ALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLK 235
Query: 623 KQGLNIILNTKIHDIKINKENVLI------NYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676
KQGL+ L+TK+ K N + ++ +NK N++ E+ LL+A+GR P
Sbjct: 236 KQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV-------LLVAVGRRPY 288
Query: 677 TNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736
L +KIGL+V++ ++++D + P+I +GDV GPMLAHKAEEEGI E +
Sbjct: 289 IAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLK 348
Query: 737 GQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGM 796
+N+N +P V+Y+ PE+A VGKTE+ LK+ I Y +G FPF ANSRA+ +T G
Sbjct: 349 TGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGF 408
Query: 797 VKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856
VKIL D K++ ILG HIIGP A E+IAEA +A+E+ AS+ED+AR+CH HP+LSEA KEA
Sbjct: 409 VKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEAN 468
Query: 857 MSIENRSIN 865
M+ +++I+
Sbjct: 469 MAAYDKAIH 477
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 355 bits (910), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/484 (41%), Positives = 280/484 (57%), Gaps = 26/484 (5%)
Query: 383 MSFIMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIP 442
+ F +D+IVIG+GPGGYV +I+ AQLG K A + E+ GGTC NVGCIP
Sbjct: 18 LYFQSXXAYDLIVIGSGPGGYVCAIKAAQLGXKVAVV------EKRSTYGGTCLNVGCIP 71
Query: 443 SKALLQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
SKALL S F ++ G+ N LNLQK G
Sbjct: 72 SKALLHASEXFHQAQHGLEALGVEVANPKLNLQKXXAHKDATVKSNVDGVSFLFKKNKID 131
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIATGSKARSFPGVK--FDENLIL 558
G TGK+ ++ + N+ E + AK ++IATGS PGV+ FDE I+
Sbjct: 132 GFQG----TGKVLGQ-GKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIV 186
Query: 559 SNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
S+ GAL + VP ++G GVIGLE+GS+W RLG++VT++E L D E+AK+
Sbjct: 187 SSTGALALEKVPASXIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGXDGEVAKQLQ 246
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINY----SNKSTNVKTEIITSIFDKLLIAIGRI 674
L KQG++ L K+ + + + + ++T + E++ LIA GR
Sbjct: 247 RXLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVV-------LIATGRK 299
Query: 675 PNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEH 734
P+T+ L + K G+ ++ + ++ + +T+I +YAIGDVVRGP LAHKAE+EG+ VAE
Sbjct: 300 PSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGPXLAHKAEDEGVAVAEI 359
Query: 735 ISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETS 794
I+GQ +N++ +P V+YT PE+ASVGKTE+ LK ++Y +G FPF AN RAR +T
Sbjct: 360 IAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARAXLQTD 419
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKE 854
G VKIL+D ++D +LG HIIG A E I E + EF SSED+ R CH HP+ SEA+KE
Sbjct: 420 GFVKILADKETDRVLGGHIIGFGAGEXIHEIAVLXEFGGSSEDLGRTCHAHPTXSEAVKE 479
Query: 855 AAMS 858
AA+S
Sbjct: 480 AALS 483
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/466 (39%), Positives = 267/466 (57%), Gaps = 20/466 (4%)
Query: 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSH 451
+ +V+GAGPGGYVA+IR AQLG K ++ K N LGG C NVGCIPSKAL+ SH
Sbjct: 5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVE--KGN-----LGGVCLNVGCIPSKALISASH 57
Query: 452 SFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIFT 511
+E K+S E GI +NVT++ K+ E G G A F
Sbjct: 58 RYEQAKHSE-EMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFV 116
Query: 512 GKIQNNFHEIQIIN-KTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVP 570
+ + ++++N + +T T K IIATGS+ P KF N IL + GAL + VP
Sbjct: 117 -----DANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFS-NRILDSTGALNLGEVP 170
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL 630
K L +IG G IG+E+G+ + G++VTILE + L+ ++++A L K+G+ ++
Sbjct: 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 230
Query: 631 NTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN 690
N + ++ V + Y N +T+ I + D +L+ +GR PNT+ L +++IG+K+
Sbjct: 231 NALAKGAEEREDGVTVTYE---ANGETKTIDA--DYVLVTVGRRPNTDELGLEQIGIKMT 285
Query: 691 ENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFV 750
I V+ C T++PNI+AIGD+V GP LAHKA EG + AE I+G ++++ A+P V
Sbjct: 286 NRGLIEVDQQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAV 345
Query: 751 IYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILG 810
+++ PE ASVG EQ K I FPF AN RA L +T G +K++ + I+G
Sbjct: 346 VFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIG 405
Query: 811 IHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856
IIGP AS++IAE +AIE ++EDIA H HP+L E EAA
Sbjct: 406 AQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAA 451
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 258/477 (54%), Gaps = 21/477 (4%)
Query: 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQ 448
K +D+IVIG GPGGY A+IR AQLG K + E +GG C NVGCIP+KALL
Sbjct: 5 KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAV-------EAGEVGGVCLNVGCIPTKALLH 57
Query: 449 TSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ + ++K + +G+ + L+L+K+ G G A
Sbjct: 58 AAETLHHLKVAEG-FGLKAKP-ELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFA 115
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMIN 568
G E+++ E AK +I+ATGS+ G F E++ S +
Sbjct: 116 RLVGP-----KEVEVGG---ERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEG 167
Query: 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628
+PK+L +IG G +GLE+G ++RRLG+EVT++E L D E A L K+G+ +
Sbjct: 168 LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRV 227
Query: 629 ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLK 688
TK + K+ + + E++ A+GR P T L ++K G+K
Sbjct: 228 RTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLV---AVGRKPRTEGLGLEKAGVK 284
Query: 689 VNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALP 748
V+E FI VN ET++P +YAIGD R P+LAHKA EG++ AE+ +G+ + ++ +P
Sbjct: 285 VDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQ-VP 343
Query: 749 FVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEI 808
V+YT PE A VG TE+ K+ VG FP A+ RA LG GMVK++ D ++D +
Sbjct: 344 SVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLL 403
Query: 809 LGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865
LG+ I+GP A ELIAEA +A+E A+ D+A H HP+LSE++ EAA + ++I+
Sbjct: 404 LGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIH 460
>pdb|1C4T|A Chain A, Catalytic Domain From Trimeric Dihydrolipoamide
Succinyltransferase
pdb|1C4T|B Chain B, Catalytic Domain From Trimeric Dihydrolipoamide
Succinyltransferase
pdb|1C4T|C Chain C, Catalytic Domain From Trimeric Dihydrolipoamide
Succinyltransferase
pdb|1SCZ|A Chain A, Improved Structural Model For The Catalytic Domain Of
E.Coli Dihydrolipoamide Succinyltransferase
pdb|1E2O|A Chain A, Catalytic Domain From Dihydrolipoamide Succinyltransferase
Length = 233
Score = 267 bits (683), Expect = 2e-71, Method: Composition-based stats.
Identities = 122/213 (57%), Positives = 166/213 (77%)
Query: 167 SRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKL 226
+R E+ VPM+RLR +AERLL+++ ++A+LTTFNE+NM+ I+DLR +Y + FEK H ++L
Sbjct: 1 ARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRL 60
Query: 227 GFMSFFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSI 286
GFMSF+VKAVV ALK+YP +NAS+DG++++YH Y+D+ +A+S+ RGLV P+LR+ DT+ +
Sbjct: 61 GFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGM 120
Query: 287 ADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAXX 346
ADIEKKI E K +D KL E+++GG FTI+NGGVFGS++STPIINPPQSAILG+HA
Sbjct: 121 ADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIK 180
Query: 347 XXXXXXXXXXXXXXXXYFALSYDHRIIDGREAV 379
Y ALSYDHR+IDGRE+V
Sbjct: 181 DRPMAVNGQVEILPMMYLALSYDHRLIDGRESV 213
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 246/484 (50%), Gaps = 29/484 (5%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDE--WKDNEENFALGGTCTNVGCIPSKALL 447
++DV+V+GAGPGGYVA+IR AQLG TA ++ W GG C NVGCIPSKALL
Sbjct: 5 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW---------GGVCLNVGCIPSKALL 55
Query: 448 QTS---HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX 504
+ + H F +F GI+ + VT + +R +G
Sbjct: 56 RNAELVHIFTKDAKAF---GISGE-VTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEI 111
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGAL 564
HG+ F N + + + E++T IIATGS R PG N++ + L
Sbjct: 112 HGYGTFA---DANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYEEQIL 168
Query: 565 EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624
+PK + I GAG IG+E G + + G +VTI+E L D +++K+ K
Sbjct: 169 SR-ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKL 227
Query: 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK 684
G+ I+ TK+ I V + + V E+ +K+L AIG PN +DK
Sbjct: 228 GVTILTATKVESIADGGSQVTVTVTKD--GVAQELKA---EKVLQAIGFAPNVEGYGLDK 282
Query: 685 IGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSI-- 742
G+ + + I V+D TN+ +IYAIGDV LAH AE +G++ AE I+G +
Sbjct: 283 AGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLG 342
Query: 743 NFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSD 802
+ LP + P +AS G TEQ + V FPF AN++A +G+ SG VK+++D
Sbjct: 343 DHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVAD 402
Query: 803 MKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENR 862
K E+LG H++G +EL+ E +A + ++ ++AR H HP++SEA++E +
Sbjct: 403 AKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFHGLVGH 462
Query: 863 SINY 866
IN+
Sbjct: 463 MINF 466
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 236/459 (51%), Gaps = 31/459 (6%)
Query: 403 YVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFE 462
YVA+IR QLG T + E ALGGTC N+GCIPSKAL+ + F + F E
Sbjct: 18 YVAAIRAGQLGIPTVLV-------EGQALGGTCLNIGCIPSKALIHVAEQFHQA-SRFTE 69
Query: 463 ---YGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA-IFTGKIQNNF 518
GI+ + L++ + + +G HG A + GK
Sbjct: 70 PSPLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGK----- 124
Query: 519 HEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGA 578
++++ + I +++++ATGS + P + +I S + AL +P+ L ++G
Sbjct: 125 -QVEV---DGQRIQCEHLLLATGSSSVELPMLPLGGPVISSTE-ALAPKALPQHLVVVGG 179
Query: 579 GVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIK 638
G IGLE+G +R+LG++V+++E L T D E+ L K G+ + L H ++
Sbjct: 180 GYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLG---HSVE 236
Query: 639 INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVN 698
+ L+ K ++ E D++L+A+GR P T N++ + LK+N I ++
Sbjct: 237 GYENGCLLANDGKGGQLRLEA-----DRVLVAVGRRPRTKGFNLECLDLKMN-GAAIAID 290
Query: 699 DNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIA 758
+ C+T++ N++AIGDV PMLAH+A +G MVAE I+G+ A+ V +T PE+
Sbjct: 291 ERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVV 350
Query: 759 SVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMA 818
VGKT + + + V FPF AN RA L SG V++++ + ILG +G
Sbjct: 351 VVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAV 410
Query: 819 SELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAM 857
SEL ++E A ED+A H HP+L EA++EAA+
Sbjct: 411 SELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAAL 449
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 245/484 (50%), Gaps = 29/484 (5%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDE--WKDNEENFALGGTCTNVGCIPSKALL 447
++DV+V+GAGPGGYVA+IR AQLG TA ++ W GG C NVGCIPSKALL
Sbjct: 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW---------GGVCLNVGCIPSKALL 53
Query: 448 QTS---HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX 504
+ + H F +F GI+ + VT + +R +G
Sbjct: 54 RNAELVHIFTKDAKAF---GISGE-VTFDYGIAYDRSRKVAEGRVAGVHFLXKKNKITEI 109
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGAL 564
HG+ F N + + + E++T IIATGS R PG N++ + L
Sbjct: 110 HGYGTFA---DANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYEEQIL 166
Query: 565 EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624
+PK + I GAG IG E G + + G +VTI+E L D +++K+ K
Sbjct: 167 SR-ELPKSIIIAGAGAIGXEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKL 225
Query: 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK 684
G+ I+ TK+ I V + + V E+ +K+L AIG PN +DK
Sbjct: 226 GVTILTATKVESIADGGSQVTVTVTKD--GVAQELKA---EKVLQAIGFAPNVEGYGLDK 280
Query: 685 IGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSI-- 742
G+ + + I V+D TN+ +IYAIGDV LAH AE +G++ AE I+G +
Sbjct: 281 AGVALTDRKAIGVDDYXRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLG 340
Query: 743 NFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSD 802
+ LP + P +AS G TEQ + V FPF AN++A +G+ SG VK+++D
Sbjct: 341 DHRXLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVAD 400
Query: 803 MKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENR 862
K E+LG H++G +EL+ E +A + ++ ++AR H HP+ SEA++E +
Sbjct: 401 AKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTXSEALQECFHGLVGH 460
Query: 863 SINY 866
IN+
Sbjct: 461 XINF 464
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 226/465 (48%), Gaps = 27/465 (5%)
Query: 403 YVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFE 462
Y A+ A G K A ++ +K LGG C NVGCIPSKALL + + V++
Sbjct: 19 YSAAFAAADEGLKVAIVERYK------TLGGVCLNVGCIPSKALLHNAAVIDEVRH-LAA 71
Query: 463 YGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHG-------HAIFTGKIQ 515
GI L++ + G G H +
Sbjct: 72 NGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTA 131
Query: 516 NNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCI 575
+ +E K+ + K IIA GS+ P + D +I S+ GAL + VP KL I
Sbjct: 132 GDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSS-GALALKEVPGKLLI 190
Query: 576 IGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL----NIILN 631
IG G+IGLE+G+++ LGS + ++EM + D ++ K + KQ NI++N
Sbjct: 191 IGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVK----VWQKQNEYRFDNIMVN 246
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNE 691
TK ++ ++ V + + + N E +D +L+A GR PN ++ +K G+ V +
Sbjct: 247 TKTVAVEPKEDGVYVTF--EGANAPKE--PQRYDAVLVAAGRAPNGKLISAEKAGVAVTD 302
Query: 692 NNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVI 751
FI V+ TN+P+IYAIGD+V PMLAHKA EG + AE+ +G K + +P V
Sbjct: 303 RGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVA 362
Query: 752 YTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGI 811
YT PE+A VG+TE K FP+ A+ RA G K++ D ++ I+G
Sbjct: 363 YTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGG 422
Query: 812 HIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856
I+GP ++I E +AIE + DI + H HP+L E++ AA
Sbjct: 423 GIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAA 467
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 226/465 (48%), Gaps = 27/465 (5%)
Query: 403 YVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFE 462
Y A+ A G K A ++ +K LGG C NVGCIPSKALL + + V++
Sbjct: 19 YSAAFAAADEGLKVAIVERYK------TLGGVCLNVGCIPSKALLHNAAVIDEVRH-LAA 71
Query: 463 YGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHG-------HAIFTGKIQ 515
GI L++ + G G H +
Sbjct: 72 NGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTA 131
Query: 516 NNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCI 575
+ +E K+ + K IIA GS+ P + D +I S+ GAL + VP KL I
Sbjct: 132 GDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSS-GALALKEVPGKLLI 190
Query: 576 IGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL----NIILN 631
IG G+IGLE+G+++ LGS + ++EM + D ++ K + KQ NI++N
Sbjct: 191 IGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVK----VWQKQNEYRFDNIMVN 246
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNE 691
TK ++ ++ V + + + N E +D +L+A GR PN ++ +K G+ V +
Sbjct: 247 TKTVAVEPKEDGVYVTF--EGANAPKE--PQRYDAVLVAAGRAPNGKLISAEKAGVAVTD 302
Query: 692 NNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVI 751
FI V+ TN+P+IYAIGD+V PMLAHKA EG + AE+ +G K + +P V
Sbjct: 303 RGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVA 362
Query: 752 YTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGI 811
YT PE+A VG+TE K FP+ A+ RA G K++ D ++ I+G
Sbjct: 363 YTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGG 422
Query: 812 HIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856
I+GP ++I E +AIE + DI + H HP+L E++ AA
Sbjct: 423 GIVGPNGGDMIGEVYLAIEMGCDAADIGKTIHPHPTLGESIGMAA 467
>pdb|3DUF|I Chain I, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate
Dehydrogenase Multi-Enzyme Complex
pdb|3DUF|J Chain J, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate
Dehydrogenase Multi-Enzyme Complex
pdb|3DV0|I Chain I, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate
Dehydrogenase Multi-Enzyme Complex
pdb|3DV0|J Chain J, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate
Dehydrogenase Multi-Enzyme Complex
pdb|3DVA|I Chain I, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate
Dehydrogenase Multi-Enzyme Complex
pdb|3DVA|J Chain J, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate
Dehydrogenase Multi-Enzyme Complex
Length = 428
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 204/410 (49%), Gaps = 34/410 (8%)
Query: 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITD 64
E K+P + E I E ++ W K G+ V ++ L +++ DK ++E+P+P G + +I++ +
Sbjct: 4 EFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPE 63
Query: 65 GSIVTSNQVIALIDTD-------------------ISKLSSKTEIKNKKDI--------- 96
G++ T Q + +D ++ SK E +
Sbjct: 64 GTVATVGQTLITLDAPGYENMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPAAEAEA 123
Query: 97 -KNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEEKQEKYK 155
N I MPS +K + ++I ++ GTGK+GR++KED+ L+ E+
Sbjct: 124 GPNRRVIAMPSVRKYAREKGVDI-RLVQGTGKNGRVLKEDIDAFLAGGAKPAPAAAEEKA 182
Query: 156 PYLDSISIKNNSRLEECV-PMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKY 214
+ E MS +R IA+ ++ S+ + +T +E ++ ++ R K+
Sbjct: 183 APAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKF 242
Query: 215 KDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNN--IIYHKYYDIGIAISSSRG 272
K E +KL F+ + VKA+VSAL++YP++N S+D II YY+IGIA + RG
Sbjct: 243 K-AIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRG 301
Query: 273 LVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPII 332
L+VP++++AD I + ++INE KA+D KL P EM G + TI+N G G TP+I
Sbjct: 302 LLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVI 361
Query: 333 NPPQSAILGVHAXXXXXXXXXXXXXXXXXXYFALSYDHRIIDGREAVLSL 382
N P+ AILG+ +LS+DHR+IDG A +L
Sbjct: 362 NHPEVAILGIGRIAEKPIVRDGEIVAAPMLALSLSFDHRMIDGATAQKAL 411
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 222/476 (46%), Gaps = 42/476 (8%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKAL 446
M ++FD+I IG G GG + + A G + A I E+ ALGGTC NVGC+P K +
Sbjct: 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALI-------ESKALGGTCVNVGCVPKKVM 53
Query: 447 LQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHG 506
SH E V+++ +G+ TL+ +++ S G
Sbjct: 54 WYASHLAEAVRDAP-GFGVQASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG 112
Query: 507 HAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA--RSFPGVKFDENLILSNKGAL 564
HA F + H I++ + ++A +I+IATG + PG + L +++ G
Sbjct: 113 HARFV-----DAHTIEV---EGQRLSADHIVIATGGRPIVPRLPGAE----LGITSDGFF 160
Query: 565 EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624
+ PK++ IIGAG IG+E+ + R GSEVT++ + L D ++ ++ Q
Sbjct: 161 ALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQ 220
Query: 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK 684
G+ L + ++ + + + + T ++ FD ++ A+GR PNT +L ++
Sbjct: 221 GIETHLEFAVAALERDAQGTTL-VAQDGTRLEG------FDSVIWAVGRAPNTRDLGLEA 273
Query: 685 IGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHI-SGQ-KHSI 742
G++V N + + TN+P +YA+GD+ L A G +AE + GQ + +
Sbjct: 274 AGIEVQSNGMVPTDAYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDGQSERKL 333
Query: 743 NFNALPFVIYTFPEIASVGKTE----QYLKKHNISYNVGIFP--FLANSRARILGETSGM 796
+++ +P V++ P ++ VG +E + L Y P + N G + M
Sbjct: 334 DYDNIPTVVFAHPPLSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEH----GPKTAM 389
Query: 797 VKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
K++ ++G+H+IG A E++ +A++ A+ D +HP +E +
Sbjct: 390 -KLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEEL 444
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 230/478 (48%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVGC+P K + T
Sbjct: 3 SYDYLVIGGGSGGLESAWRAAELGARAAVV-------ESHKLGGTCVNVGCVPKKVMWNT 55
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 56 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 113
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 114 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 163
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 164 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 223
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 224 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 282
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 283 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 342
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 343 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 399
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 400 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 457
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 230/478 (48%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVGC+P K + T
Sbjct: 20 SYDYLVIGGGSGGLESAWRAAELGARAAVV-------ESHKLGGTCVNVGCVPKKVMWNT 72
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 73 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 130
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 131 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 180
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 181 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 240
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 299
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 300 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 359
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 360 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 416
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 417 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 219/475 (46%), Gaps = 24/475 (5%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKAL 446
M V VIG+G A+++ + G + I E +GGTC NVGC+PSK +
Sbjct: 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLI-------ERGTIGGTCVNVGCVPSKIM 53
Query: 447 LQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXX--XXXXXX 504
++ +H + S F+ GI T++ K+L +
Sbjct: 54 IRAAHIAHLRRESPFDGGIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVV 113
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGAL 564
HG A F + +++ + + ++ATG+ P E+ ++ AL
Sbjct: 114 HGEARFK---DDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEAL 170
Query: 565 EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624
+P++L +IG+ V+ LE+ + RLGS+VT+L ++ F D I + +
Sbjct: 171 ASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFRE-DPAIGEAVTAAFRAE 229
Query: 625 GLNIILNTKIHDIK-INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNID 683
G+ ++ +T+ + ++ E VL T E+ DKLL+A GR PNT +L +D
Sbjct: 230 GIEVLEHTQASQVAHMDGEFVL-------TTTHGELRA---DKLLVATGRTPNTRSLALD 279
Query: 684 KIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSIN 743
G+ VN I+++ T+ PNIYA GD P + A G A +++G +++
Sbjct: 280 AAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALD 339
Query: 744 FNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDM 803
A+P V++T P++A+VG +E I + RA +T G +K++ +
Sbjct: 340 LTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEE 399
Query: 804 KSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMS 858
S ++G+ + P A ELI A +AI R + +++A + ++ E +K AA +
Sbjct: 400 GSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQT 454
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 222/485 (45%), Gaps = 36/485 (7%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDN--EENFALGGTCTNVGCIPS 443
M++ +D++VIGAG GG A A L K A ID K + ALGGTC NVGC+P
Sbjct: 1 MSRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPK 60
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
K ++ ++ + ++ S F + ++ ++V N + ++
Sbjct: 61 KLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL 120
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKTK------ETITAKYIIIATGSKARSFPGVKFDENL 556
H G +Q+N H + + ET+ +YI++ATGS + G++ D+
Sbjct: 121 TFHQG---WGALQDN-HTVLVRESADPNSAVLETLDTEYILLATGSWPQHL-GIEGDDLC 175
Query: 557 ILSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEI 613
I SN+ A + PK+ +G G I +E I ++ G +V + L D E+
Sbjct: 176 ITSNE-AFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSEL 234
Query: 614 AKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR 673
K+ L G+N+ + H+ N V N V + +D +++AIGR
Sbjct: 235 RKQLTEQLRANGINV----RTHE---NPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 287
Query: 674 IPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAE 733
+P + L +DK G++V +N I V+ +TN+ NIYAIGDV ML A EG +
Sbjct: 288 VPRSQTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVD 347
Query: 734 HISGQK-HSINFNALPFVIYTFPEIASVGKTEQ-YLKKHN--ISYNVGIFPFLANSRARI 789
+ K + + + +++ P + G E+ KK++ Y P + N I
Sbjct: 348 TVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHN----I 403
Query: 790 LGETSG--MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPS 847
G T MV+I+++ E+LG+H++G + E+I I ++ A D VHP+
Sbjct: 404 SGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPT 463
Query: 848 LSEAM 852
+E +
Sbjct: 464 SAEEL 468
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 230/478 (48%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVGC+P K + T
Sbjct: 19 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTCVNVGCVPKKVMWNT 71
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 72 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 129
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 130 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 179
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 180 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 239
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 240 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 298
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 299 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 358
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 359 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 415
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 416 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 473
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 230/478 (48%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVGC+P K + T
Sbjct: 20 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTCVNVGCVPKKVMWNT 72
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 73 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 130
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 131 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 180
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 181 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 240
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 299
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 300 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 359
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 360 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 416
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 417 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 222/485 (45%), Gaps = 36/485 (7%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDN--EENFALGGTCTNVGCIPS 443
M++ +D++VIGAG GG A A L K A ID K + ALGGTC NVGC+P
Sbjct: 1 MSRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPK 60
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
K ++ ++ + ++ S F + ++ ++V N + ++
Sbjct: 61 KLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL 120
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKTK------ETITAKYIIIATGSKARSFPGVKFDENL 556
H G +Q+N H + + ET+ +YI++ATGS + G++ D+
Sbjct: 121 TFHQG---FGALQDN-HTVLVRESADPNSAVLETLDTEYILLATGSWPQHL-GIEGDDLC 175
Query: 557 ILSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEI 613
I SN+ A + PK+ +G G I +E I ++ G +V + L D E+
Sbjct: 176 ITSNE-AFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSEL 234
Query: 614 AKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR 673
K+ L G+N+ + H+ N V N V + +D +++AIGR
Sbjct: 235 RKQLTEQLRANGINV----RTHE---NPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 287
Query: 674 IPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAE 733
+P + L +DK G++V +N I V+ +TN+ NIYAIGDV ML A EG +
Sbjct: 288 VPRSQTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVD 347
Query: 734 HISGQK-HSINFNALPFVIYTFPEIASVGKTEQ-YLKKHN--ISYNVGIFPFLANSRARI 789
+ K + + + +++ P + G E+ KK++ Y P + N I
Sbjct: 348 TVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHN----I 403
Query: 790 LGETSG--MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPS 847
G T MV+I+++ E+LG+H++G + E+I I ++ A D VHP+
Sbjct: 404 SGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPT 463
Query: 848 LSEAM 852
+E +
Sbjct: 464 SAEEL 468
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 230/478 (48%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVGC+P K + T
Sbjct: 21 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTCVNVGCVPKKVMWNT 73
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 74 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 131
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 132 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 181
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 182 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 241
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 242 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 300
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 301 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 360
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 361 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 417
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 418 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 475
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 230/478 (48%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVGC+P K + T
Sbjct: 3 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTCVNVGCVPKKVMWNT 55
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 56 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 113
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 114 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 163
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 164 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 223
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 224 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 282
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 283 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 342
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 343 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 399
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 400 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 457
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 223/488 (45%), Gaps = 42/488 (8%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWKDNEENF--ALGGTCTNVGCIPS 443
M+K FD++VIGAG GG A A L G + A +D + F ALGGTC NVGC+P
Sbjct: 1 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPK 60
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
K ++ + ++++ S F + + +V N +K++
Sbjct: 61 KLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINK-----SYEGMFN 115
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKT-------KETITAKYIIIATGSKARSFPGVKFDEN 555
G F G + ++ +T KE + A +I++ATGS + P + E+
Sbjct: 116 DTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQ-MPAIPGIEH 174
Query: 556 LILSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEE 612
I SN+ A + P+++ +G G I +E I ++ G +VT+ ++ L DE
Sbjct: 175 CISSNE-AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDET 233
Query: 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAI 671
I ++ L G+ I+ N + +N ++ S +V E ++ D +++AI
Sbjct: 234 IREEVTKQLTANGIEIMTNENPAKVSLN--------TDGSKHVTFESGKTLDVDVVMMAI 285
Query: 672 GRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMV 731
GRIP TN+L + +G+K+ + V++ TN+PNIYAIGD+ ML A EG +
Sbjct: 286 GRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAAL 345
Query: 732 AEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHN---ISYNVGIFPFLAN--- 784
+ + G K + + +++ P I + G E+ K Y P + N
Sbjct: 346 VDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISG 405
Query: 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHV 844
S+ + + KI+++ +LG+H++G A E+I + + A D V
Sbjct: 406 SKYKKF-----VAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGV 460
Query: 845 HPSLSEAM 852
HP+ +E +
Sbjct: 461 HPTSAEEL 468
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 223/488 (45%), Gaps = 42/488 (8%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWKDNEENF--ALGGTCTNVGCIPS 443
M+K FD++VIGAG GG A A L G + A +D + F ALGGTC NVGC+P
Sbjct: 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPK 63
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
K ++ + ++++ S F + + +V N +K++
Sbjct: 64 KLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINK-----SYEGMFN 118
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKT-------KETITAKYIIIATGSKARSFPGVKFDEN 555
G F G + ++ +T KE + A +I++ATGS + P + E+
Sbjct: 119 DTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQ-MPAIPGIEH 177
Query: 556 LILSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEE 612
I SN+ A + P+++ +G G I +E I ++ G +VT+ ++ L DE
Sbjct: 178 CISSNE-AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDET 236
Query: 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAI 671
I ++ L G+ I+ N + +N ++ S +V E ++ D +++AI
Sbjct: 237 IREEVTKQLTANGIEIMTNENPAKVSLN--------TDGSKHVTFESGKTLDVDVVMMAI 288
Query: 672 GRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMV 731
GRIP TN+L + +G+K+ + V++ TN+PNIYAIGD+ ML A EG +
Sbjct: 289 GRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAAL 348
Query: 732 AEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHN---ISYNVGIFPFLAN--- 784
+ + G K + + +++ P I + G E+ K Y P + N
Sbjct: 349 VDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISG 408
Query: 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHV 844
S+ + + KI+++ +LG+H++G A E+I + + A D V
Sbjct: 409 SKYKKF-----VAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGV 463
Query: 845 HPSLSEAM 852
HP+ +E +
Sbjct: 464 HPTSAEEL 471
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 226/487 (46%), Gaps = 40/487 (8%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLA-QLGFKTACIDEWKDNEENF--ALGGTCTNVGCIPS 443
M++ +D++V+GAG GG A A K A +D + ALGGTC NVGC+P
Sbjct: 21 MSRAYDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQATHGPPLFAALGGTCVNVGCVPK 80
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
K ++ + + ++ S F + ++ +++ N + ++
Sbjct: 81 KLMVTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGL 140
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKTK-------ETITAKYIIIATGSKARSFPGVKFDEN 555
H + G +Q+ H + ++ K++ ET+ +YI+IATGS GV DE
Sbjct: 141 SFH---MGFGALQDA-HTV-VVRKSEDPHSDVLETLDTEYILIATGSWPTRL-GVPGDEF 194
Query: 556 LILSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEE 612
I SN+ A + + PK++ +G G I +E I ++ G V + L D E
Sbjct: 195 CITSNE-AFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTE 253
Query: 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIG 672
+ K L G+ + T ++ KI K N+ + + + + +D++++AIG
Sbjct: 254 VRKSLTKQLGANGIRV--RTNLNPTKITKNEDGSNHVHFNDGTEED-----YDQVMLAIG 306
Query: 673 RIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVA 732
R+P + L +DK G++ +N + V+ +T++ NIYAIGDV ML A EG
Sbjct: 307 RVPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEGAAFV 366
Query: 733 EHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILG 791
E + G K + + + +++ P I + G TE+ K N A+S ++
Sbjct: 367 ETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAK-----NYETVAVYASSFTPLMH 421
Query: 792 ETSG------MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVH 845
SG M++I+++ + E+LG+H++G A E+I I ++ A D VH
Sbjct: 422 NISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVH 481
Query: 846 PSLSEAM 852
P+ +E +
Sbjct: 482 PTSAEEL 488
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 226/487 (46%), Gaps = 40/487 (8%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLA-QLGFKTACIDEWKDNEENF--ALGGTCTNVGCIPS 443
M++ +D++V+GAG GG A A K A +D + ALGGTC NVGC+P
Sbjct: 21 MSRAYDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQATHGPPLFAALGGTCVNVGCVPK 80
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
K ++ + + ++ S F + ++ +++ N + ++
Sbjct: 81 KLMVTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGL 140
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKTK-------ETITAKYIIIATGSKARSFPGVKFDEN 555
H + G +Q+ H + ++ K++ ET+ +YI+IATGS GV DE
Sbjct: 141 SFH---MGFGALQDA-HTV-VVRKSEDPHSDVLETLDTEYILIATGSWPTRL-GVPGDEF 194
Query: 556 LILSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEE 612
I SN+ A + + PK++ +G G I +E I ++ G V + L D E
Sbjct: 195 CITSNE-AFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTE 253
Query: 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIG 672
+ K L G+ + T ++ KI K N+ + + + + +D++++AIG
Sbjct: 254 VRKSLTKQLGANGIRV--RTNLNPTKITKNEDGSNHVHFNDGTEED-----YDQVMLAIG 306
Query: 673 RIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVA 732
R+P + L +DK G++ +N + V+ +T++ NIYAIGDV ML A EG
Sbjct: 307 RVPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEGAAFV 366
Query: 733 EHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILG 791
E + G K + + + +++ P I + G TE+ K N A+S ++
Sbjct: 367 ETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAK-----NYETVAVYASSFTPLMH 421
Query: 792 ETSG------MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVH 845
SG M++I+++ + E+LG+H++G A E+I I ++ A D VH
Sbjct: 422 NISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVH 481
Query: 846 PSLSEAM 852
P+ +E +
Sbjct: 482 PTSAEEL 488
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 222/484 (45%), Gaps = 36/484 (7%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDN--EENFALGGTCTNVGCIPSK 444
++ +D++VIGAG GG A A L K A ID K + ALGGTC NVGC+P K
Sbjct: 1 SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKK 60
Query: 445 ALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXX 503
++ ++ + ++ S F + ++ ++V N + ++
Sbjct: 61 LMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT 120
Query: 504 XHGHAIFTGKIQNNFHEIQIINKTK------ETITAKYIIIATGSKARSFPGVKFDENLI 557
H G +Q+N H + + ET+ +YI++ATGS + G++ D+ I
Sbjct: 121 FHQG---FGALQDN-HTVLVRESADPNSAVLETLDTEYILLATGSWPQHL-GIEGDDLCI 175
Query: 558 LSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEIA 614
SN+ A + PK+ +G G I +E I ++ G +V + L D E+
Sbjct: 176 TSNE-AFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 234
Query: 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674
K+ L G+N+ + H+ N V N V + +D +++AIGR+
Sbjct: 235 KQLTEQLRANGINV----RTHE---NPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287
Query: 675 PNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEH 734
P + L ++K G++V +N I V+ +TN+ NIYAIGDV ML A EG +
Sbjct: 288 PRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDT 347
Query: 735 ISGQK-HSINFNALPFVIYTFPEIASVGKTEQ-YLKKHN--ISYNVGIFPFLANSRARIL 790
+ K + + + +++ P + G E+ KK++ Y P + N I
Sbjct: 348 VFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHN----IS 403
Query: 791 GETSG--MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSL 848
G T MV+I+++ E+LG+H++G + E+I I ++ A D+ VHP+
Sbjct: 404 GSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDVYNTIGVHPTS 463
Query: 849 SEAM 852
+E +
Sbjct: 464 AEEL 467
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 232/480 (48%), Gaps = 40/480 (8%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVGC+P K + T
Sbjct: 3 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTCVNVGCVPKKVMWNT 55
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXX--XXXXXXXXXHG 506
+ HS + +YG + N + + E+ + G
Sbjct: 56 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAXYVSRLNAIXYQNNLTKSHIEIIRG 113
Query: 507 HAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNK 561
HA FT + I + + TA +I+IATG + PG +L +++
Sbjct: 114 HAAFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSD 163
Query: 562 GALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621
G ++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 164 GFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEEL 223
Query: 622 NKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNN 679
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +
Sbjct: 224 ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKD 282
Query: 680 LNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK 739
L+++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 283 LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYK 342
Query: 740 HS--INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGE 792
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +
Sbjct: 343 EDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---K 399
Query: 793 TSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
T ++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 400 TKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 459
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 222/478 (46%), Gaps = 27/478 (5%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACID--EWKDNEENFALGGTCTNVGCIPSKA 445
++FD++VIG G GG + AQLG K A D E + LGGTC NVGCIP K
Sbjct: 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKL 63
Query: 446 LLQTSHSFENVKNSFFEYGIN-TQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX 504
+ Q + ++++ YG Q V N + M E G
Sbjct: 64 MHQAALLGGMIRDAH-HYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYF 122
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKET--ITAKYIIIATGSKARSFPGVKFDENLILSNKG 562
+ A F + H ++ ++K + ++A++I+IATG + R VK +++
Sbjct: 123 NIKASFV-----DEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDD 177
Query: 563 ALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622
+ P K ++GA + LE +G + T++ M S L D++++ +
Sbjct: 178 IFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVM-MRSIPLRGFDQQMSSLVTEHME 236
Query: 623 KQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLN 681
G + IK N L + + + ++ + T FD +L AIGR+P T LN
Sbjct: 237 SHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKED---TGTFDTVLWAIGRVPETRTLN 293
Query: 682 IDKIGLKVN-ENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISGQK 739
++K G+ N +N IIV+ T++P+IYAIGDV G P L A + G ++A+ + G+
Sbjct: 294 LEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKS 353
Query: 740 HSI-NFNALPFVIYTFPEIASVGKTEQ-----YLKKHNISYNVGIFPFLANSRARILGET 793
++ +++ +P ++T E VG +E+ + ++H Y+ P R +
Sbjct: 354 STLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQC 413
Query: 794 SGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSE 850
+K++ + + +LG+H +GP A E+ + I+ AS + + +HP+ SE
Sbjct: 414 --YIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSE 469
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 229/478 (47%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVG +P K + T
Sbjct: 20 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTCVNVGXVPKKVMWNT 72
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 73 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 130
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 131 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 180
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 181 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNXTEELEN 240
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDXLLWAIGRVPNTKDLS 299
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 300 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 359
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 360 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 416
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 417 CVMKMVXANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 221/484 (45%), Gaps = 36/484 (7%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDN--EENFALGGTCTNVGCIPSK 444
++ +D++VIGAG GG A A L K A ID K + ALGGTC NVGC+P K
Sbjct: 1 SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKK 60
Query: 445 ALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXX 503
++ ++ + ++ S F + ++ ++V N + ++
Sbjct: 61 LMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT 120
Query: 504 XHGHAIFTGKIQNNFHEIQIINKTK------ETITAKYIIIATGSKARSFPGVKFDENLI 557
H G +Q+N H + + ET+ +YI++ATGS + G++ D+ I
Sbjct: 121 FHQG---FGALQDN-HTVLVRESADPNSAVLETLDTEYILLATGSWPQHL-GIEGDDLCI 175
Query: 558 LSNKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEIA 614
SN+ A + PK+ +G G I +E I ++ G +V + L D E+
Sbjct: 176 TSNE-AFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 234
Query: 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674
K+ L G+N+ + H+ N V N V + +D +++AIGR+
Sbjct: 235 KQLTEQLRANGINV----RTHE---NPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287
Query: 675 PNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEH 734
P + L ++K G++V +N I V+ +TN+ NIYAIGDV ML A EG +
Sbjct: 288 PRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDT 347
Query: 735 ISGQK-HSINFNALPFVIYTFPEIASVGKTEQ-YLKKHN--ISYNVGIFPFLANSRARIL 790
+ K + + + +++ P + G E+ KK++ Y P + N I
Sbjct: 348 VFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHN----IS 403
Query: 791 GETSG--MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSL 848
G T MV+I+++ E+LG+H++G + E+I I ++ A D VHP+
Sbjct: 404 GSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTS 463
Query: 849 SEAM 852
+E +
Sbjct: 464 AEEL 467
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 222/478 (46%), Gaps = 27/478 (5%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACID--EWKDNEENFALGGTCTNVGCIPSKA 445
++FD++VIG G GG + AQLG K A D E + LGGTC NVGCIP K
Sbjct: 30 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKL 89
Query: 446 LLQTSHSFENVKNSFFEYGIN-TQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX 504
+ Q + ++++ YG Q V N + M E G
Sbjct: 90 MHQAALLGGMIRDAH-HYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYF 148
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKET--ITAKYIIIATGSKARSFPGVKFDENLILSNKG 562
+ A F + H ++ ++K + ++A++I+IATG + R VK +++
Sbjct: 149 NIKASFV-----DEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDD 203
Query: 563 ALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622
+ P K ++GA + LE +G + T++ M S L D++++ +
Sbjct: 204 IFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVM-MRSIPLRGFDQQMSSLVTEHME 262
Query: 623 KQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLN 681
G + IK N L + + + ++ + T FD +L AIGR+P T LN
Sbjct: 263 SHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKED---TGTFDTVLWAIGRVPETRTLN 319
Query: 682 IDKIGLKVN-ENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISGQK 739
++K G+ N +N IIV+ T++P+IYAIGDV G P L A + G ++A+ + G+
Sbjct: 320 LEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKS 379
Query: 740 HSI-NFNALPFVIYTFPEIASVGKTEQ-----YLKKHNISYNVGIFPFLANSRARILGET 793
++ +++ +P ++T E VG +E+ + ++H Y+ P R +
Sbjct: 380 STLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQC 439
Query: 794 SGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSE 850
+K++ + + +LG+H +GP A E+ + I+ AS + + +HP+ SE
Sbjct: 440 --YIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSE 495
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 229/478 (47%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGT NVGC+P K + T
Sbjct: 20 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTXVNVGCVPKKVMWNT 72
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 73 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 130
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 131 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 180
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 181 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 240
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 299
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 300 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 359
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 360 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 416
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 417 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 229/478 (47%), Gaps = 38/478 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
++D +VIG G GG ++ R A+LG + A + E+ LGGTC NVG +P K + T
Sbjct: 20 SYDYLVIGGGSGGLASARRAAELGARAAVV-------ESHKLGGTCVNVGXVPKKVMWNT 72
Query: 450 S-HSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHA 508
+ HS + +YG + N + + E+ + GHA
Sbjct: 73 AVHS--EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA 130
Query: 509 IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-----FPGVKFDENLILSNKGA 563
FT + I + + TA +I+IATG + PG +L +++ G
Sbjct: 131 AFTSDPKPT------IEVSGKKYTAPHILIATGGMPSTPHESQIPGA----SLGITSDGF 180
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++ +P + I+GAG I +E+ I LGS+ +++ L + D I+ L
Sbjct: 181 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 240
Query: 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI--FDKLLIAIGRIPNTNNLN 681
G+ ++ +++ ++K + ++ + ++T I D LL AIGR+PNT +L+
Sbjct: 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLS 299
Query: 682 IDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS 741
++K+G++ ++ IIV++ TN+ IYA+GDV +L A G +A + K
Sbjct: 300 LNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKED 359
Query: 742 --INFNALPFVIYTFPEIASVGKTE-QYLKKHNI----SYNVGIFPFLANSRARILGETS 794
+++N +P V+++ P I +VG TE + + K+ I +Y+ P R +T
Sbjct: 360 SKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR---KTK 416
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
++K++ K ++++GIH+ G E++ +A++ A+ D +HP+ SE +
Sbjct: 417 CVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 206/450 (45%), Gaps = 34/450 (7%)
Query: 408 RLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467
R A G K A I E LGGTC NVGC+P K + + E + +YG +T
Sbjct: 22 RAAMYGQKCALI-------EAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDT 74
Query: 468 QNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQIINKT 527
N + ++ + G A F + + +
Sbjct: 75 TINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFV--------DAKTLEVN 126
Query: 528 KETITAKYIIIATGSKAR--SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEI 585
ETITA +I+IATG + PGV++ + + G + +P+++ ++GAG IG+E+
Sbjct: 127 GETITADHILIATGGRPSHPDIPGVEYG----IDSDGFFALPALPERVAVVGAGYIGVEL 182
Query: 586 GSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL 645
G + LG++ + EM L + D I++ ++N +G ++H I K +
Sbjct: 183 GGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEG------PQLHTNAIPK--AV 234
Query: 646 INYSNKSTNVKTEIITS-IFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704
+ ++ S ++ E S D L+ AIGR P +N+N++ G+K NE +I+V+ TN
Sbjct: 235 VKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTN 294
Query: 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK--HSINFNALPFVIYTFPEIASVGK 762
I IYA+GD L A G ++E + K ++++ +P V+++ P I +VG
Sbjct: 295 IEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGL 354
Query: 763 TEQYLKKHNISYNVGIF--PFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASE 820
TE ++ V ++ F A A +K++ ++I+GIH IG E
Sbjct: 355 TEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDE 414
Query: 821 LIAEAVIAIEFRASSEDIARICHVHPSLSE 850
++ +A++ A+ +D +HP+ +E
Sbjct: 415 MLQGFAVALKMGATKKDFDNTVAIHPTAAE 444
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 231/480 (48%), Gaps = 38/480 (7%)
Query: 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQ 448
K++D +VIG G GG ++ R A G KT + E ALGGTC NVGC+P K +
Sbjct: 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLV-------EAKALGGTCVNVGCVPKKVMWY 62
Query: 449 TSHSFENVKNSFFEYGI------NTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXX 502
S V ++ EYG+ + +++T N + ++
Sbjct: 63 ASDLATRVSHAN-EYGLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD 121
Query: 503 XXHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA---RSFPGVKFDENLILS 559
G A F ++ E+Q + T E +A +I++ATG KA + PG + L
Sbjct: 122 VVFGWARFN---KDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGFE----LGTD 174
Query: 560 NKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFH 619
+ G + PKK+ ++GAG IG+E+ ++ LGSE ++ L DE I
Sbjct: 175 SDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITD 234
Query: 620 LLNKQGLNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
K+G+N+ +KI ++ N E + L + N S ++ D+L+ IGR +
Sbjct: 235 HYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDD------VDELIWTIGRKSHL- 287
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG- 737
+ + +G+K+N ++ II ++ TN+PNIY++GDVV L A G ++ + G
Sbjct: 288 GMGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGP 347
Query: 738 ---QKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIF--PFLANSRARILGE 792
+ +++ +P VI++ PE S+G +E+ + N+ ++ F A A + +
Sbjct: 348 EKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEK 407
Query: 793 TSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
+ KI+ +++++G+HI+G ++E++ +AI+ A+ D +HP+ +E +
Sbjct: 408 SPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEEL 467
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 226/487 (46%), Gaps = 39/487 (8%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACID--EWKDNEENFALGGTCTNVGCIPSKALL 447
++D+IVIG G GG A A+ G KTA +D E + LGGTC NVGCIP K +
Sbjct: 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMH 166
Query: 448 QT---SHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX 504
Q SH+ E+ ++ F + ++ ++ N M+E G
Sbjct: 167 QAGLLSHALEDAEH--FGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYL 224
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIATGSKARSFPGVKFDENLILSNKG 562
+ G++ + HE+QI +K ++ TIT II+ATG + + +P + +++
Sbjct: 225 NAK----GRLISP-HEVQITDKNQKVSTITGNKIILATGERPK-YPEIPGAVEYGITSDD 278
Query: 563 ALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622
+ P K +IGA + LE LG +VT++ + S L D+++A+K +
Sbjct: 279 LFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVM-VRSILLRGFDQQMAEKVGDYME 337
Query: 623 KQGLNI--------ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674
G+ I K+ D + NK +L+ + + K E F+ ++ A+GR
Sbjct: 338 NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFE---EEFETVIFAVGRE 394
Query: 675 PNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAE 733
P + + + +G+K+++N ++ D+ +T + N+YAIGD+ G P L A + G +A
Sbjct: 395 PQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLAR 454
Query: 734 HI-SGQKHSINFNALPFVIYTFPEIASVGKTEQ-----YLKKHNISYNVGIFPFLANSRA 787
+ +G +++ + ++T E + G +E+ Y K Y+ P
Sbjct: 455 RLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAH 514
Query: 788 RILGETSGMVKILSDMKSD--EILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVH 845
R E + L KSD +LG+H++GP A E+ +AI+ A+ D R +H
Sbjct: 515 R---EDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIH 571
Query: 846 PSLSEAM 852
P+ SE
Sbjct: 572 PTCSETF 578
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 223/489 (45%), Gaps = 39/489 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN--FALGGTCTNVGCIPSKALL 447
++D +VIG GPGG ++ A G + D K + + + +GGTC NVGC+P K +
Sbjct: 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMH 101
Query: 448 QTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGH 507
H K YG N+ + +K++ +G
Sbjct: 102 YAGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL 161
Query: 508 AIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMI 567
A K +++ ++K +ET+T KYI+IATG + V+ + L +++ +
Sbjct: 162 AKLKDKNTVSYYLKGDLSK-EETVTGKYILIATGCRPHIPDDVEGAKELSITSDDIFSLK 220
Query: 568 NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL- 626
P K ++GA + LE LG +VT+ + S L D++ A K + +QG+
Sbjct: 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTV-AVRSIVLRGFDQQCAVKVKLYMEEQGVM 279
Query: 627 --NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK 684
N IL K+ + + +L+ +S+K+ + ++D +L AIGR + + LN++
Sbjct: 280 FKNGILPKKLTKM---DDKILVEFSDKT--------SELYDTVLYAIGRKGDIDGLNLES 328
Query: 685 IGLKVNENNFIIVNDNCE-TNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISGQKHSI 742
+ + VN++N I+ D+ TNIP+I+A+GDV P LA A + G ++A + I
Sbjct: 329 LNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEI 388
Query: 743 -NFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIF----------------PFLANS 785
+++ +P IYT E + G +E+ + NV +F A
Sbjct: 389 MDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQK 448
Query: 786 RARILGETSGMVKILSDMKSDE--ILGIHIIGPMASELIAEAVIAIEFRASSEDIARICH 843
L +S + L +K+++ ++G H +GP A E+ +A+ + +D
Sbjct: 449 DEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIG 508
Query: 844 VHPSLSEAM 852
+HP+ +E+
Sbjct: 509 IHPTDAESF 517
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 226/487 (46%), Gaps = 39/487 (8%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACID--EWKDNEENFALGGTCTNVGCIPSKALL 447
++D+IVIG G GG A A+ G KTA +D E + LGGTC NVGCIP K +
Sbjct: 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMH 166
Query: 448 QT---SHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX 504
Q SH+ E+ ++ F + ++ ++ N M+E G
Sbjct: 167 QAGLLSHALEDAEH--FGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYL 224
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIATGSKARSFPGVKFDENLILSNKG 562
+ G++ + HE+QI +K ++ TIT II+ATG + + +P + +++
Sbjct: 225 NAK----GRLISP-HEVQITDKNQKVSTITGNKIILATGERPK-YPEIPGAVEYGITSDD 278
Query: 563 ALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622
+ P K +IGA + LE LG +VT++ + S L D+++A+K +
Sbjct: 279 LFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVM-VRSILLRGFDQQMAEKVGDYME 337
Query: 623 KQGLNI--------ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674
G+ I K+ D + NK +L+ + + K E F+ ++ A+GR
Sbjct: 338 NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFE---EEFETVIFAVGRE 394
Query: 675 PNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAE 733
P + + + +G+K+++N ++ D+ +T + N+YAIGD+ G P L A + G +A
Sbjct: 395 PQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLAR 454
Query: 734 HI-SGQKHSINFNALPFVIYTFPEIASVGKTEQ-----YLKKHNISYNVGIFPFLANSRA 787
+ +G +++ + ++T E + G +E+ Y K Y+ P
Sbjct: 455 RLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAH 514
Query: 788 RILGETSGMVKILSDMKSD--EILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVH 845
R E + L KSD +LG+H++GP A E+ +AI+ A+ D R +H
Sbjct: 515 R---EDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIH 571
Query: 846 PSLSEAM 852
P+ SE
Sbjct: 572 PTCSETF 578
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 226/487 (46%), Gaps = 39/487 (8%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACID--EWKDNEENFALGGTCTNVGCIPSKALL 447
++D+IVIG G GG A A+ G KTA +D E + LGGTC NVGCIP K +
Sbjct: 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMH 166
Query: 448 QT---SHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX 504
Q SH+ E+ ++ F + ++ ++ N M+E G
Sbjct: 167 QAGLLSHALEDAEH--FGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYL 224
Query: 505 HGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIATGSKARSFPGVKFDENLILSNKG 562
+ G++ + HE+QI +K ++ TIT II+ATG + + +P + +++
Sbjct: 225 NAK----GRLISP-HEVQITDKNQKVSTITGNKIILATGERPK-YPEIPGAVEYGITSDD 278
Query: 563 ALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622
+ P K +IGA + LE LG +VT++ + S L D+++A+K +
Sbjct: 279 LFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVM-VRSILLRGFDQQMAEKVGDYME 337
Query: 623 KQGLNI--------ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674
G+ I K+ D + NK +L+ + + K E F+ ++ A+GR
Sbjct: 338 NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFE---EEFETVIFAVGRE 394
Query: 675 PNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAE 733
P + + + +G+K+++N ++ D+ +T + N+YAIGD+ G P L A + G +A
Sbjct: 395 PQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLAR 454
Query: 734 HI-SGQKHSINFNALPFVIYTFPEIASVGKTEQ-----YLKKHNISYNVGIFPFLANSRA 787
+ +G +++ + ++T E + G +E+ Y K Y+ P
Sbjct: 455 RLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAH 514
Query: 788 RILGETSGMVKILSDMKSD--EILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVH 845
R E + L KSD +LG+H++GP A E+ +AI+ A+ D R +H
Sbjct: 515 R---EDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIH 571
Query: 846 PSLSEAM 852
P+ SE
Sbjct: 572 PTCSETF 578
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 214/451 (47%), Gaps = 29/451 (6%)
Query: 428 NFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN-VTLNLQKMLERXXXXXX 486
N+ LGGTC NVGCIP K + Q + + +K+S YG ++ V + +KM E
Sbjct: 52 NWGLGGTCVNVGCIPKKLMHQAALLGQALKDS-RNYGWKLEDTVKHDWEKMTESVQNHIG 110
Query: 487 XXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQII-NKTKETI-TAKYIIIATGSKA 544
G + + F G H+I NK KE + +A+ +IATG +
Sbjct: 111 SLNWGYRVALREKKVVYENAYGKFIGP-----HKIMATNNKGKEKVYSAERFLIATGERP 165
Query: 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604
R + G+ D+ +S+ + P K ++GA + LE +G +VT++ + S
Sbjct: 166 R-YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSI 223
Query: 605 FLNTVDEEIAKKAFHLLNKQGLNII---LNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661
L D+++A K + + G+ I + TKI I+ L + KSTN + E I
Sbjct: 224 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRL-KVTAKSTNSE-ETIE 281
Query: 662 SIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF-IIVNDNCETNIPNIYAIGDVVRGPM- 719
F+ +L+A+GR T + ++ +G+K+NE I V D +TN+P IYAIGD++ G +
Sbjct: 282 DEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 341
Query: 720 LAHKAEEEGIMVAEHI-SGQKHSINFNALPFVIYTFPEIASVGKTE----QYLKKHNIS- 773
L A + G ++A+ + G +++ +P ++T E G +E + + NI
Sbjct: 342 LTPVAIQAGRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEV 401
Query: 774 YNVGIFPFLANSRARILGETSGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFR 832
Y+ +P +R K++ ++K +E ++G H++GP A E+ A++
Sbjct: 402 YHSFFWPLEWTVPSR--DNNKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCG 459
Query: 833 ASSEDIARICHVHPSLSEAMKEAAMSIENRS 863
+ + + +HP +E +S+ RS
Sbjct: 460 LTKQQLDSTIGIHPVCAEIF--TTLSVTKRS 488
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 224/470 (47%), Gaps = 36/470 (7%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
+FD+ VIG+G GG A+ LG + A +E++ +GGTC GC+P K
Sbjct: 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR-------IGGTCVIRGCVPKKLYFYA 78
Query: 450 SHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAI 509
S + S +G + N +K++ A+
Sbjct: 79 SQYAQEFSKSI-GFGWKYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAV 137
Query: 510 FTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINV 569
F + H +++ + T E I+A+ I+IATG+K S +K +L L++ ++ +
Sbjct: 138 FVDE-----HTLEL-SVTGERISAEKILIATGAKIVSNSAIK-GSDLCLTSNEIFDLEKL 190
Query: 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNII 629
PK + I+G G IG+E +I+ LG + T+L L D ++ + + +G++II
Sbjct: 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISII 250
Query: 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
+ ++ + EN Y+ TN +T D++++A GR+PNT L +++ G+KV
Sbjct: 251 YEATVSQVQ-STENC---YNVVLTNGQTICA----DRVMLATGRVPNTTGLGLERAGVKV 302
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVVR----GPMLAHKAEEEGIMVAEHISGQKHSINFN 745
NE ++V++ TN+ +I+A+GDV P+ H A V + +++
Sbjct: 303 NEFGAVVVDEKMTTNVSHIWAVGDVTGHIQLTPVAIHDAM---CFVKNAFENTSTTPDYD 359
Query: 746 ALPFVIYTFPEIASVGKTEQ-YLKKHNISYNVGIFPFLANSRARIL-GETSGM-VKILSD 802
+ +++ PEI +VG +E+ L ++ V I+ + +L G M +K++ D
Sbjct: 360 LITTAVFSQPEIGTVGLSEEDALHRYK---RVEIYRTVFRPMRNVLSGSPEKMFMKLVVD 416
Query: 803 MKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
+S ++G H++G A E+ I+++ + + + + VHP++SE +
Sbjct: 417 GESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEEL 466
>pdb|1B5S|A Chain A, Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalytic
Domain (Residues 184-425) From Bacillus
Stearothermophilus
pdb|1B5S|B Chain B, Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalytic
Domain (Residues 184-425) From Bacillus
Stearothermophilus
pdb|1B5S|C Chain C, Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalytic
Domain (Residues 184-425) From Bacillus
Stearothermophilus
pdb|1B5S|D Chain D, Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalytic
Domain (Residues 184-425) From Bacillus
Stearothermophilus
pdb|1B5S|E Chain E, Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalytic
Domain (Residues 184-425) From Bacillus
Stearothermophilus
Length = 242
Score = 141 bits (356), Expect = 1e-33, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 121/210 (57%), Gaps = 3/210 (1%)
Query: 175 MSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVK 234
MS +R IA+ ++ S+ + +T +E ++ ++ R K+K E +KL F+ + VK
Sbjct: 19 MSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFK-AIAAEKGIKLTFLPYVVK 77
Query: 235 AVVSALKQYPIINASVDGNN--IIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKK 292
A+VSAL++YP++N S+D II YY+IGIA + RGL+VP++++AD I + ++
Sbjct: 78 ALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQE 137
Query: 293 INEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAXXXXXXXX 352
INE KA+D KL P EM G + TI+N G G TP+IN P+ AILG+
Sbjct: 138 INELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVR 197
Query: 353 XXXXXXXXXXYFALSYDHRIIDGREAVLSL 382
+LS+DHR+IDG A +L
Sbjct: 198 DGEIVAAPMLALSLSFDHRMIDGATAQKAL 227
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 213/450 (47%), Gaps = 29/450 (6%)
Query: 429 FALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN-VTLNLQKMLERXXXXXXX 487
+ LGGTC NVGCIP K + Q + + +K+S YG ++ V + +KM E
Sbjct: 53 WGLGGTCVNVGCIPKKLMHQAALLGQALKDS-RNYGWKLEDTVKHDWEKMTESVQNHIGS 111
Query: 488 XXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQII-NKTKETI-TAKYIIIATGSKAR 545
G + + F G H+I NK KE + +A+ +IATG + R
Sbjct: 112 LNWGYRVALREKKVVYENAYGKFIGP-----HKIMATNNKGKEKVYSAERFLIATGERPR 166
Query: 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605
+ G+ D+ +S+ + P K ++GA + LE +G +VT++ + S
Sbjct: 167 -YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSIL 224
Query: 606 LNTVDEEIAKKAFHLLNKQGLNII---LNTKIHDIKINKENVLINYSNKSTNVKTEIITS 662
L D+++A K + + G+ I + TKI I+ L + KSTN + E I
Sbjct: 225 LRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRL-KVTAKSTNSE-ETIED 282
Query: 663 IFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF-IIVNDNCETNIPNIYAIGDVVRGPM-L 720
F+ +L+A+GR T + ++ +G+K+NE I V D +TN+P IYAIGD++ G + L
Sbjct: 283 EFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLEL 342
Query: 721 AHKAEEEGIMVAEHI-SGQKHSINFNALPFVIYTFPEIASVGKTE----QYLKKHNIS-Y 774
A + G ++A+ + G +++ +P ++T E G +E + + NI Y
Sbjct: 343 TPVAIQAGRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVY 402
Query: 775 NVGIFPFLANSRARILGETSGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFRA 833
+ +P +R K++ ++K +E ++G H++GP A E+ A++
Sbjct: 403 HSFFWPLEWTVPSR--DNNKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGL 460
Query: 834 SSEDIARICHVHPSLSEAMKEAAMSIENRS 863
+ + + +HP +E +S+ RS
Sbjct: 461 TKQQLDSTIGIHPVCAEIF--TTLSVTKRS 488
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 202/450 (44%), Gaps = 34/450 (7%)
Query: 408 RLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467
R A G K A I E LGGTC NVGC+P K + + E + +YG +T
Sbjct: 22 RAAMYGQKCALI-------EAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDT 74
Query: 468 QNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQIINKT 527
N + ++ + G A F + + +
Sbjct: 75 TINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFV--------DAKTLEVN 126
Query: 528 KETITAKYIIIATGSKAR--SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEI 585
ETITA +I+IATG + PGV++ + + G + +P+++ ++GAG I +E+
Sbjct: 127 GETITADHILIATGGRPSHPDIPGVEYG----IDSDGFFALPALPERVAVVGAGYIAVEL 182
Query: 586 GSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL 645
+ LG++ + L + D I++ ++N +G ++H I K +
Sbjct: 183 AGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEG------PQLHTNAIPK--AV 234
Query: 646 INYSNKSTNVKTEIITS-IFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704
+ ++ S ++ E S D L+ AIGR P +N+N++ G+K NE +I+V+ TN
Sbjct: 235 VKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTN 294
Query: 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK--HSINFNALPFVIYTFPEIASVGK 762
I IYA+GD L A G ++E + K ++++ +P V+++ P I +VG
Sbjct: 295 IEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGL 354
Query: 763 TEQYLKKHNISYNVGIF--PFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASE 820
TE ++ V ++ F A A +K++ ++I+GIH IG E
Sbjct: 355 TEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDE 414
Query: 821 LIAEAVIAIEFRASSEDIARICHVHPSLSE 850
++ +A++ A+ +D +HP+ +E
Sbjct: 415 MLQGFAVALKMGATKKDFDNTVAIHPTAAE 444
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 220/486 (45%), Gaps = 34/486 (6%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEE---NFALGGTCTNVGCIPSKAL 446
++D+IVIG G G + G + AC+D K + +GGTC NVGCIP K +
Sbjct: 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLM 68
Query: 447 LQTSHSFENVKNSFFEYGINTQN-VTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXH 505
Q S E V + YG N + + + K+++ +
Sbjct: 69 HQASLLGEAVHEAA-AYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYIN 127
Query: 506 GHAIFTGKIQNNFHEIQIINKTKE-TITAKYIIIATGSKARSFPGVKFDENLILSNKGAL 564
G F + H + K+ E TITA+ +IA G + R +P + +++
Sbjct: 128 GLGSFV-----DSHTLLAKLKSGERTITAQTFVIAVGGRPR-YPDIPGAVEYGITSDDLF 181
Query: 565 EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624
+ P K ++GAG IGLE + LG E T++ + S L D+++A+ + ++
Sbjct: 182 SLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM-VRSIVLRGFDQQMAELVAASMEER 240
Query: 625 GLNIILNTKIHDI-KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNID 683
G+ + T + K + +L+ Y N T ++E ++D +L AIGR ++LN+
Sbjct: 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESE---DVYDTVLWAIGRKGLVDDLNLP 297
Query: 684 KIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHI-SGQKHS 741
G+ V ++ I V+ TN+ NIYA+GD++ G P L A G ++A + G
Sbjct: 298 NAGVTVQKDK-IPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQR 356
Query: 742 INFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIF-----P---FLANSRARILGET 793
+++ + ++T E A VG +E+ K + + +F P F+ R
Sbjct: 357 MDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYC--- 413
Query: 794 SGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
+K +++ D+ + G+H IGP+A E+I A++ + + +HP+ +E
Sbjct: 414 --YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEF 471
Query: 853 KEAAMS 858
A++
Sbjct: 472 TRLAIT 477
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 220/486 (45%), Gaps = 34/486 (6%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEE---NFALGGTCTNVGCIPSKAL 446
++D+IVIG G G + G + AC+D K + +GGTC NVGCIP K +
Sbjct: 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLM 68
Query: 447 LQTSHSFENVKNSFFEYGINTQN-VTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXH 505
Q S E V + YG N + + + K+++ +
Sbjct: 69 HQASLLGEAVHEAA-AYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYIN 127
Query: 506 GHAIFTGKIQNNFHEIQIINKTKE-TITAKYIIIATGSKARSFPGVKFDENLILSNKGAL 564
G F + H + K+ E TITA+ +IA G + R +P + +++
Sbjct: 128 GLGSFV-----DSHTLLAKLKSGERTITAQTFVIAVGGRPR-YPDIPGAVEYGITSDDLF 181
Query: 565 EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624
+ P K ++GAG IGLE + LG E T++ + S L D+++A+ + ++
Sbjct: 182 SLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM-VRSIVLRGFDQQMAELVAASMEER 240
Query: 625 GLNIILNTKIHDI-KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNID 683
G+ + T + K + +L+ Y N T ++E ++D +L AIGR ++LN+
Sbjct: 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESE---DVYDTVLWAIGRKGLVDDLNLP 297
Query: 684 KIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHI-SGQKHS 741
G+ V ++ I V+ TN+ NIYA+GD++ G P L A G ++A + G
Sbjct: 298 NAGVTVQKDK-IPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQR 356
Query: 742 INFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIF-----P---FLANSRARILGET 793
+++ + ++T E A VG +E+ K + + +F P F+ R
Sbjct: 357 MDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYC--- 413
Query: 794 SGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
+K +++ D+ + G+H IGP+A E+I A++ + + +HP+ +E
Sbjct: 414 --YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEF 471
Query: 853 KEAAMS 858
A++
Sbjct: 472 TRLAIT 477
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 220/486 (45%), Gaps = 34/486 (6%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEE---NFALGGTCTNVGCIPSKAL 446
++D+IVIG G G + G + AC+D K + +GGTC NVGCIP K +
Sbjct: 5 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLM 64
Query: 447 LQTSHSFENVKNSFFEYGINTQN-VTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXH 505
Q S E V + YG N + + + K+++ +
Sbjct: 65 HQASLLGEAVHEAA-AYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYIN 123
Query: 506 GHAIFTGKIQNNFHEIQIINKTKE-TITAKYIIIATGSKARSFPGVKFDENLILSNKGAL 564
G F + H + K+ E TITA+ +IA G + R +P + +++
Sbjct: 124 GLGSFV-----DSHTLLAKLKSGERTITAQTFVIAVGGRPR-YPDIPGAVEYGITSDDLF 177
Query: 565 EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624
+ P K ++GAG IGLE + LG E T++ + S L D+++A+ + ++
Sbjct: 178 SLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM-VRSIVLRGFDQQMAELVAASMEER 236
Query: 625 GLNIILNTKIHDI-KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNID 683
G+ + T + K + +L+ Y N T ++E ++D +L AIGR ++LN+
Sbjct: 237 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESE---DVYDTVLWAIGRKGLVDDLNLP 293
Query: 684 KIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHI-SGQKHS 741
G+ V ++ I V+ TN+ NIYA+GD++ G P L A G ++A + G
Sbjct: 294 NAGVTVQKDK-IPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQR 352
Query: 742 INFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIF-----P---FLANSRARILGET 793
+++ + ++T E A VG +E+ K + + +F P F+ R
Sbjct: 353 MDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYC--- 409
Query: 794 SGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
+K +++ D+ + G+H IGP+A E+I A++ + + +HP+ +E
Sbjct: 410 --YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEF 467
Query: 853 KEAAMS 858
A++
Sbjct: 468 TRLAIT 473
>pdb|3MAE|A Chain A, Crystal Structure Of Probable Dihydrolipamide
Acetyltransferase From Listeria Monocytogenes 4b F2365
pdb|3MAE|B Chain B, Crystal Structure Of Probable Dihydrolipamide
Acetyltransferase From Listeria Monocytogenes 4b F2365
pdb|3MAE|C Chain C, Crystal Structure Of Probable Dihydrolipamide
Acetyltransferase From Listeria Monocytogenes 4b F2365
Length = 256
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 114/203 (56%)
Query: 173 VPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFF 232
+P++ +R IA+ + S+ E++ ++ R KD F+KE L + +FF
Sbjct: 21 IPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFF 80
Query: 233 VKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKK 292
+KAV ALK++P +N++ G+ II H +I IAI++ L VP+++NAD SI I ++
Sbjct: 81 IKAVAQALKEFPQLNSTWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIARE 140
Query: 293 INEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAXXXXXXXX 352
I+E KA++ KL +M GGTFT+++ G FGS+ S IIN PQ+AIL V +
Sbjct: 141 ISELAGKARNGKLSQADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVII 200
Query: 353 XXXXXXXXXXYFALSYDHRIIDG 375
LS DHRI+DG
Sbjct: 201 DDMIAVRDMVNLCLSIDHRILDG 223
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 226/487 (46%), Gaps = 44/487 (9%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKAL 446
M+ +DV+VIGAG GY + RLA+ + D + LGG C GC+PSK +
Sbjct: 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE------LGGNCLYSGCVPSKTV 54
Query: 447 ---LQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXX 503
+QT+ N+ N + L+ + +R
Sbjct: 55 REVIQTAWRLTNIANV---------KIPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLT 105
Query: 504 XHGHAIFTGKIQNNFHEIQIINKTKET-ITAKYIIIATGSKARSF--PGVKF--DENLIL 558
+ + KI++ H I ++ KE +Y+IIA+G++ PGV++ + I
Sbjct: 106 FYKGYV---KIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIF 162
Query: 559 SNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTV-DEEIAKKA 617
K + +P+ + IIGAG IGLEI SI+R +G + I+EM L T+ D++I
Sbjct: 163 GYKTSFR--KLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTL 220
Query: 618 FHLLNKQGLNIILNTKIHDIK-INKENVLINYSNKSTNVKTEIITSIF-DKLLIAIGRIP 675
+L LNI N+ + ++K I + + YS K + K SIF + +++A GR P
Sbjct: 221 LSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKK-----SIFTNSVVLAAGRRP 272
Query: 676 NTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHI 735
+IGL +++ I+V++ +TNIPN++A GD H A I A +I
Sbjct: 273 VIPE-GAREIGLSISKTG-IVVDETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNI 330
Query: 736 SGQKHSINF---NALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGE 792
+++ ++P IYT P ++ VG +K I + + A+I G+
Sbjct: 331 MANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIEIVEAEYNMEEDVSAQIYGQ 390
Query: 793 TSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852
G++K++ + S ++G +IG + LI E +A+ + +++ +A HPS +E +
Sbjct: 391 KEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEII 450
Query: 853 KEAAMSI 859
A +
Sbjct: 451 SYTARKV 457
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 213/491 (43%), Gaps = 47/491 (9%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT 449
N DV +IG G G A + K I E A G TC VGC PSK L+
Sbjct: 8 NVDVAIIGTGTAGXGAYRAAKKHTDKVVLI-------EGGAYGTTCARVGCXPSKLLIAA 60
Query: 450 SH-SFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXX-HGH 507
+ S+ + F GI +++N + + +R G
Sbjct: 61 ADASYHASQTDLF--GIQVDRISVNGKAVXKRIQTERDRFVGFVVESVESFDEQDKIRGF 118
Query: 508 AIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMI 567
A F + H +Q+ + ++ + AK I+IATGS+ + + +L+N E+
Sbjct: 119 AKFLDE-----HTLQVDDHSQ--VIAKRIVIATGSRPNYPEFLAAAGSRLLTNDNLFELN 171
Query: 568 NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627
++PK + + G GVIGLE+G RLG V + S + N DEE + A N++
Sbjct: 172 DLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEXKRYAEKTFNEE--- 228
Query: 628 IILNTKIHDIK-INKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKI 685
+ K I I KE+ V + Y +KS TE F +L A GR N + L ++
Sbjct: 229 FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTE----SFQYVLAATGRKANVDKLGLENT 284
Query: 686 GLKVNENNFIIVND-NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS-------G 737
+++++ N + ++ +T++ +I+ GD L H+A ++G + + G
Sbjct: 285 SIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGAYPVIAQG 344
Query: 738 QKHSINFNALPF-VIYTFPEIASVGKT-----EQYLKKHNISYNVGIFPFLANSRARILG 791
Q+ + P V++T P++ASVG + + Y + +Y VG F R+R+ G
Sbjct: 345 QRRA------PLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVXG 398
Query: 792 ETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEA 851
+ G++ + +D S E LG GP A + A + + + + HP + E
Sbjct: 399 KNKGLLNVYADRTSGEFLGAEXFGPAAEHIGHLLAWARQQQXTVQAXLTXPFYHPVIEEG 458
Query: 852 MKEAAMSIENR 862
++ A + +
Sbjct: 459 LRTALRDAQQK 469
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 204/470 (43%), Gaps = 19/470 (4%)
Query: 393 VIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALL-QTSH 451
++++G GP GY A++ A +T + + +GG C+PSK + T
Sbjct: 5 IVILGGGPAGYEAALVAATSHPETTQVTVIDCD----GIGGAAVLDDCVPSKTFIASTGL 60
Query: 452 SFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIF- 510
E + + I+ + ++L ++ R + G
Sbjct: 61 RTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELI 120
Query: 511 ---TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMI 567
G ++ T E A +++ATG+ R P + D IL+ + ++
Sbjct: 121 DSTPGLARHRIKATAADGSTSEH-EADVVLVATGASPRILPSAQPDGERILTWRQLYDLD 179
Query: 568 NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627
+P L ++G+GV G E + LG VT++ + L D + A ++G+
Sbjct: 180 ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVR 239
Query: 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGL 687
+ N + + VL+ ++ T + L+ IG +PNT+ L ++++G+
Sbjct: 240 LFKNARAASVTRTGAGVLVTMTDGRTVEGSHA--------LMTIGSVPNTSGLGLERVGI 291
Query: 688 KVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHS-INFNA 746
++ N++ V+ T IYA GD LA A +G + H G+ S I
Sbjct: 292 QLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRT 351
Query: 747 LPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSD 806
+ ++T PEIA+VG + + +++ + P N+RA++ G VKI +
Sbjct: 352 VAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTG 411
Query: 807 EILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856
++G ++ P+ASELI +A++ R + ++A+ V+PSLS ++ EAA
Sbjct: 412 VVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAA 461
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 210/451 (46%), Gaps = 29/451 (6%)
Query: 428 NFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT-QNVTLNLQKMLERXXXXXX 486
+ LGGTC NVGCIP K + Q + + +++S YG + V + +M+E
Sbjct: 74 RWGLGGTCVNVGCIPKKLMHQAALLGQALQDS-RNYGWKVEETVKHDWDRMIEAVQNHIG 132
Query: 487 XXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQII-NKTKETI-TAKYIIIATGSKA 544
G + + F G H I+ NK KE I +A+ +IATG +
Sbjct: 133 SLNWGYRVALREKKVVYENAYGQFIGP-----HRIKATNNKGKEKIYSAERFLIATGERP 187
Query: 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604
R + G+ D+ +S+ + P K ++GA + LE +G +VT++ + S
Sbjct: 188 R-YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSI 245
Query: 605 FLNTVDEEIAKKAFHLLNKQGLNII---LNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661
L D+++A K + + G+ I + K+ I+ L +STN + EII
Sbjct: 246 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSE-EIIE 303
Query: 662 SIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF-IIVNDNCETNIPNIYAIGDVVRGPM- 719
++ +++AIGR T + ++ +G+K+NE I V D +TN+P IYAIGD++ +
Sbjct: 304 GEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVE 363
Query: 720 LAHKAEEEGIMVAEHI-SGQKHSINFNALPFVIYTFPEIASVGKTE----QYLKKHNIS- 773
L A + G ++A+ + +G ++ +P ++T E + G +E + + NI
Sbjct: 364 LTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 423
Query: 774 YNVGIFPFLANSRARILGETSGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFR 832
Y+ +P +R KI+ + K +E ++G H++GP A E+ A++
Sbjct: 424 YHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 481
Query: 833 ASSEDIARICHVHPSLSEAMKEAAMSIENRS 863
+ + + +HP +E +S+ RS
Sbjct: 482 LTKKQLDSTIGIHPVCAEVF--TTLSVTKRS 510
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 210/451 (46%), Gaps = 29/451 (6%)
Query: 428 NFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT-QNVTLNLQKMLERXXXXXX 486
+ LGGTC NVGCIP K + Q + + +++S YG + V + +M+E
Sbjct: 66 RWGLGGTCVNVGCIPKKLMHQAALLGQALQDS-RNYGWKVEETVKHDWDRMIEAVQNHIG 124
Query: 487 XXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQII-NKTKETI-TAKYIIIATGSKA 544
G + + F G H I+ NK KE I +A+ +IATG +
Sbjct: 125 SLNWGYRVALREKKVVYENAYGQFIGP-----HRIKATNNKGKEKIYSAERFLIATGERP 179
Query: 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604
R + G+ D+ +S+ + P K ++GA + LE +G +VT++ + S
Sbjct: 180 R-YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSI 237
Query: 605 FLNTVDEEIAKKAFHLLNKQGLNII---LNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661
L D+++A K + + G+ I + K+ I+ L +STN + EII
Sbjct: 238 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSE-EIIE 295
Query: 662 SIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF-IIVNDNCETNIPNIYAIGDVVRGPM- 719
++ +++AIGR T + ++ +G+K+NE I V D +TN+P IYAIGD++ +
Sbjct: 296 GEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVE 355
Query: 720 LAHKAEEEGIMVAEHI-SGQKHSINFNALPFVIYTFPEIASVGKTE----QYLKKHNIS- 773
L A + G ++A+ + +G ++ +P ++T E + G +E + + NI
Sbjct: 356 LTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 415
Query: 774 YNVGIFPFLANSRARILGETSGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFR 832
Y+ +P +R KI+ + K +E ++G H++GP A E+ A++
Sbjct: 416 YHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 473
Query: 833 ASSEDIARICHVHPSLSEAMKEAAMSIENRS 863
+ + + +HP +E +S+ RS
Sbjct: 474 LTKKQLDSTIGIHPVCAEVF--TTLSVTKRS 502
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 210/451 (46%), Gaps = 29/451 (6%)
Query: 428 NFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT-QNVTLNLQKMLERXXXXXX 486
+ LGGTC NVGCIP K + Q + + +++S YG + V + +M+E
Sbjct: 72 RWGLGGTCVNVGCIPKKLMHQAALLGQALQDS-RNYGWKVEETVKHDWDRMIEAVQNHIG 130
Query: 487 XXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQII-NKTKETI-TAKYIIIATGSKA 544
G + + F G H I+ NK KE I +A+ +IATG +
Sbjct: 131 SLNWGYRVALREKKVVYENAYGQFIGP-----HRIKATNNKGKEKIYSAERFLIATGERP 185
Query: 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604
R + G+ D+ +S+ + P K ++GA + LE +G +VT++ + S
Sbjct: 186 R-YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSI 243
Query: 605 FLNTVDEEIAKKAFHLLNKQGLNII---LNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661
L D+++A K + + G+ I + K+ I+ L +STN + EII
Sbjct: 244 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSE-EIIE 301
Query: 662 SIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF-IIVNDNCETNIPNIYAIGDVVRGPM- 719
++ +++AIGR T + ++ +G+K+NE I V D +TN+P IYAIGD++ +
Sbjct: 302 GEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVE 361
Query: 720 LAHKAEEEGIMVAEHI-SGQKHSINFNALPFVIYTFPEIASVGKTE----QYLKKHNIS- 773
L A + G ++A+ + +G ++ +P ++T E + G +E + + NI
Sbjct: 362 LTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 421
Query: 774 YNVGIFPFLANSRARILGETSGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFR 832
Y+ +P +R KI+ + K +E ++G H++GP A E+ A++
Sbjct: 422 YHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 479
Query: 833 ASSEDIARICHVHPSLSEAMKEAAMSIENRS 863
+ + + +HP +E +S+ RS
Sbjct: 480 LTKKQLDSTIGIHPVCAEVF--TTLSVTKRS 508
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 210/451 (46%), Gaps = 29/451 (6%)
Query: 428 NFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT-QNVTLNLQKMLERXXXXXX 486
+ LGGTC NVGCIP K + Q + + +++S YG + V + +M+E
Sbjct: 72 RWGLGGTCVNVGCIPKKLMHQAALLGQALQDS-RNYGWKVEETVKHDWDRMIEAVQNHIG 130
Query: 487 XXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQII-NKTKETI-TAKYIIIATGSKA 544
G + + F G H I+ NK KE I +A+ +IATG +
Sbjct: 131 SLNWGYRVALREKKVVYENAYGQFIGP-----HRIKATNNKGKEKIYSAERFLIATGERP 185
Query: 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604
R + G+ D+ +S+ + P K ++GA + LE +G +VT++ + S
Sbjct: 186 R-YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSI 243
Query: 605 FLNTVDEEIAKKAFHLLNKQGLNII---LNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661
L D+++A K + + G+ I + K+ I+ L +STN + EII
Sbjct: 244 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSE-EIIE 301
Query: 662 SIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF-IIVNDNCETNIPNIYAIGDVVRGPM- 719
++ +++AIGR T + ++ +G+K+NE I V D +TN+P IYAIGD++ +
Sbjct: 302 GEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVE 361
Query: 720 LAHKAEEEGIMVAEHI-SGQKHSINFNALPFVIYTFPEIASVGKTE----QYLKKHNIS- 773
L A + G ++A+ + +G ++ +P ++T E + G +E + + NI
Sbjct: 362 LTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 421
Query: 774 YNVGIFPFLANSRARILGETSGMVKILSDMKSDE-ILGIHIIGPMASELIAEAVIAIEFR 832
Y+ +P +R KI+ + K +E ++G H++GP A E+ A++
Sbjct: 422 YHSYFWPLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 479
Query: 833 ASSEDIARICHVHPSLSEAMKEAAMSIENRS 863
+ + + +HP +E +S+ RS
Sbjct: 480 LTKKQLDSTIGIHPVCAEVF--TTLSVTKRS 508
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 215/476 (45%), Gaps = 69/476 (14%)
Query: 427 ENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXX 486
E LGGTC NVGC+P K + + + ++NS YG +T+ + NL ++ER
Sbjct: 32 EKSRLGGTCVNVGCVPKKIMFNAASVHDILENSR-HYGFDTK-FSFNLPLLVERRDKYIQ 89
Query: 487 XXXSGXXXXXXXXXXXXXHGHAIF--------TGKIQNNFHEIQIINKTKETITAKYIII 538
+ G A F G NN + +N+ E + + I+I
Sbjct: 90 RLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNE--EILEGRNILI 147
Query: 539 ATGSKARSFPGVKFDENLILSNKGALEMINV--PKKLCIIGAGVIGLEIGSIWRRLGSEV 596
A G+K FP VK EN I S+ E N+ KK+ I+G+G I +E+ ++ +RLG +
Sbjct: 148 AVGNKP-VFPPVKGIENTISSD----EFFNIKESKKIGIVGSGYIAVELINVIKRLGIDS 202
Query: 597 TILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIK-INKENVLINYSNKSTNV 655
I + L DE + + + K +NI+ + +IK ++ +N+ I+ S+
Sbjct: 203 YIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGR--- 259
Query: 656 KTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGD-- 713
I FD ++ +GR P+T NL ++K+ ++ N NN+I+V++N T++ NIYA+GD
Sbjct: 260 ----IYEHFDHVIYCVGRSPDTENLKLEKLNVETN-NNYIVVDENQRTSVNNIYAVGDCC 314
Query: 714 --------------------------------VVRGPMLAHKAEEEGIMVAEHISGQK-H 740
+ L A G ++A+ + +K
Sbjct: 315 MVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTR 374
Query: 741 SINFNALPFVIYTFPEIASVGKTE----QYLKKHNISYNVGIFPFLANSRARILGE--TS 794
N+ +P VI++ P I ++G +E Q K N+ F L S I E
Sbjct: 375 KTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEK 434
Query: 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSE 850
+K++ K + I G+HIIG A E++ +A++ A+ +D +HP+ +E
Sbjct: 435 TYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAE 490
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 210/483 (43%), Gaps = 33/483 (6%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDNEENF--ALGGTCTNVGCIPS 443
M+K FD++VIGAG GG A+ A L K A ID + F ALGGTC NVGC+P
Sbjct: 1 MSKIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPK 60
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLE-RXXXXXXXXXSGXXXXXXXXXX 501
K ++ + E+++ S F + + + +K++ + S
Sbjct: 61 KLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGL 120
Query: 502 XXXHGHAIFTGKIQNNFHE-IQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSN 560
G K N E + KE + + I++A+GS P + E+ I SN
Sbjct: 121 EFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPH-MPNIPGIEHCISSN 179
Query: 561 KGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEIAKKA 617
+ A + P+++ +G G I +E I ++ +VT+ L D + ++
Sbjct: 180 E-AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREEL 238
Query: 618 FHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIPN 676
L G+ I+ +++N ++ S +V E + FD +++AIGR P
Sbjct: 239 TKQLTANGIQILTKENPAKVELN--------ADGSKSVTFESGKKMDFDLVMMAIGRSPR 290
Query: 677 TNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736
T +L + G+ + +N + V++ TN+ NIYAIGDV ML A E + + +
Sbjct: 291 TKDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVF 349
Query: 737 GQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHN---ISYNVGIFPFLAN---SRARI 789
G + + +++ P I + G E+ K Y P + N S+ +
Sbjct: 350 GTNPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSFTPLMHNISGSKYKT 409
Query: 790 LGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLS 849
+ KI+++ +LG+H++G A E+I I ++ A D VHP+ +
Sbjct: 410 F-----VAKIITNHSDGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSA 464
Query: 850 EAM 852
E +
Sbjct: 465 EEL 467
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 216/484 (44%), Gaps = 33/484 (6%)
Query: 386 IMNKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDNEENF--ALGGTCTNVGCIP 442
+M+K FD++VIGAG GG A+ A L K A ID + F ALGGTC NVGC+P
Sbjct: 1 MMSKIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVP 60
Query: 443 SKALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLE-RXXXXXXXXXSGXXXXXXXXX 500
K ++ + E+++ S F + + + + ++ + S
Sbjct: 61 KKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEG 120
Query: 501 XXXXHGHAIFTGKIQNNFHE-IQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILS 559
G K N E + KE + ++I++A+GS P + E+ I S
Sbjct: 121 LEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPH-MPNIPGIEHCISS 179
Query: 560 NKGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEIAKK 616
N+ A + P+++ +G G I +E I ++ +VT+ L D + ++
Sbjct: 180 NE-AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 238
Query: 617 AFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIP 675
L G+ I+ +++N ++ S +V E + FD +++AIGR P
Sbjct: 239 LTKQLTANGIQILTKENPAKVELN--------ADGSKSVTFESGKKMDFDLVMMAIGRSP 290
Query: 676 NTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHI 735
T +L + G+ + +N + V++ TN+ NIYAIGDV ML A E + + +
Sbjct: 291 RTKDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTV 349
Query: 736 SGQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETS 794
G + + +++ P I + G E+ K Y V + +L+ S ++ + S
Sbjct: 350 FGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKR---YEV-VAVYLS-SFTPLMHKVS 404
Query: 795 G------MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSL 848
G + KI+++ +LG+H++G A E+I I ++ A D VHP+
Sbjct: 405 GSKYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTS 464
Query: 849 SEAM 852
+E +
Sbjct: 465 AEEL 468
>pdb|3RQC|A Chain A, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid
Dehydrogenase Multienzyme Complex From Thermoplasma
Acidophilum
pdb|3RQC|B Chain B, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid
Dehydrogenase Multienzyme Complex From Thermoplasma
Acidophilum
pdb|3RQC|C Chain C, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid
Dehydrogenase Multienzyme Complex From Thermoplasma
Acidophilum
pdb|3RQC|D Chain D, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid
Dehydrogenase Multienzyme Complex From Thermoplasma
Acidophilum
pdb|3RQC|E Chain E, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid
Dehydrogenase Multienzyme Complex From Thermoplasma
Acidophilum
pdb|3RQC|F Chain F, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid
Dehydrogenase Multienzyme Complex From Thermoplasma
Acidophilum
pdb|3RQC|G Chain G, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid
Dehydrogenase Multienzyme Complex From Thermoplasma
Acidophilum
Length = 224
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 15/208 (7%)
Query: 170 EECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFM 229
EE + M LR I +++ +++ T E+++ S++ + K N K+
Sbjct: 6 EEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSIL-----DSAKARNRKVTVT 60
Query: 230 SFFVKAVVSALKQYPIINASVDGNNIIY--HKYYDIGIAISSSRGLVVPILRNADTMSIA 287
F + V S LKQYP +NA D +Y KYY+IGIA+ + GL V ++++AD S+
Sbjct: 61 GFLARIVPSILKQYPYLNAIYDETRRVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMV 120
Query: 288 DIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAXXX 347
+I +I++ ++A++NKL +E+ TFTI+N G G ++STPIIN P+ AILGVH
Sbjct: 121 EISAEISDKASRARENKLQLDEVQDSTFTITNVGTIGGIMSTPIINYPEVAILGVH---- 176
Query: 348 XXXXXXXXXXXXXXXYFALSYDHRIIDG 375
Y +LS DHR+IDG
Sbjct: 177 ----RILEREGRKYMYLSLSCDHRLIDG 200
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 215/483 (44%), Gaps = 33/483 (6%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDNEENF--ALGGTCTNVGCIPS 443
M+K FD++VIGAG GG A+ A L K A ID + F ALGGTC NVGC+P
Sbjct: 1 MSKIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPK 60
Query: 444 KALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLE-RXXXXXXXXXSGXXXXXXXXXX 501
K ++ + E+++ S F + + + + ++ + S
Sbjct: 61 KLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGL 120
Query: 502 XXXHGHAIFTGKIQNNFHE-IQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSN 560
G K N E + KE + ++I++A+GS P + E+ I SN
Sbjct: 121 EFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPH-MPNIPGIEHCISSN 179
Query: 561 KGALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEIAKKA 617
+ A + P+++ +G G I +E I ++ +VT+ L D + ++
Sbjct: 180 E-AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREEL 238
Query: 618 FHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIPN 676
L G+ I+ +++N ++ S +V E + FD +++AIGR P
Sbjct: 239 TKQLTANGIQILTKENPAKVELN--------ADGSKSVTFESGKKMDFDLVMMAIGRSPR 290
Query: 677 TNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736
T +L + G+ + +N + V++ TN+ NIYAIGDV ML A E + + +
Sbjct: 291 TKDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVF 349
Query: 737 GQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSG 795
G + + +++ P I + G E+ K Y V + +L+ S ++ + SG
Sbjct: 350 GTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKR---YEV-VAVYLS-SFTPLMHKVSG 404
Query: 796 ------MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLS 849
+ KI+++ +LG+H++G A E+I I ++ A D VHP+ +
Sbjct: 405 SKYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSA 464
Query: 850 EAM 852
E +
Sbjct: 465 EEL 467
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 214/482 (44%), Gaps = 33/482 (6%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDNEENF--ALGGTCTNVGCIPSK 444
+K FD++VIGAG GG A+ A L K A ID + F ALGGTC NVGC+P K
Sbjct: 1 SKIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKK 60
Query: 445 ALLQTSHSFENVKNSF-FEYGINTQNVTLNLQKMLE-RXXXXXXXXXSGXXXXXXXXXXX 502
++ + E+++ S F + + + + ++ + S
Sbjct: 61 LMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLE 120
Query: 503 XXHGHAIFTGKIQNNFHE-IQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNK 561
G K N E + KE + ++I++A+GS P + E+ I SN+
Sbjct: 121 FFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPH-MPNIPGIEHCISSNE 179
Query: 562 GALEMINVPKKLCIIGAGVIGLEIGSI---WRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
A + P+++ +G G I +E I ++ +VT+ L D + ++
Sbjct: 180 -AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELT 238
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIPNT 677
L G+ I+ +++N ++ S +V E + FD +++AIGR P T
Sbjct: 239 KQLTANGIQILTKENPAKVELN--------ADGSKSVTFESGKKMDFDLVMMAIGRSPRT 290
Query: 678 NNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737
+L + G+ + +N + V++ TN+ NIYAIGDV ML A E + + + G
Sbjct: 291 KDLQLQNAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFG 349
Query: 738 Q-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSG- 795
+ + +++ P I + G E+ K Y V + +L+ S ++ + SG
Sbjct: 350 TTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKR---YEV-VAVYLS-SFTPLMHKVSGS 404
Query: 796 -----MVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSE 850
+ KI+++ +LG+H++G A E+I I ++ A D VHP+ +E
Sbjct: 405 KYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAE 464
Query: 851 AM 852
+
Sbjct: 465 EL 466
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 184/435 (42%), Gaps = 32/435 (7%)
Query: 427 ENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXX 486
E F GGTC GC+P K + S E+ +++ +G + K++
Sbjct: 35 EEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAA-GFGWTVGESRFDWAKLV-------- 85
Query: 487 XXXSGXXXXXXXXXXXXXHGHAIFTGKIQNNFHEIQIINKTK-----ETITAKYIIIATG 541
+ G A +I + E+ N K +T+TA+ I+IA G
Sbjct: 86 ---AAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVG 142
Query: 542 SKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEM 601
+ E I SN+ A ++ +P+ + I G G I +E +I+ LG + T++
Sbjct: 143 GHPSPHDALPGHELCITSNE-AFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYR 201
Query: 602 SSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661
L+ D++ + ++G+ I+ I + + + + + K +
Sbjct: 202 GKEILSRFDQDXRRGLHAAXEEKGIRILCEDIIQSVSADADGRRVATTXKHGEI------ 255
Query: 662 SIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLA 721
+ D++ +A+GR PNTN L ++ G++ NE IIV+ T+ P IYA+GDV L
Sbjct: 256 -VADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRVQLT 314
Query: 722 HKA-EEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKK--HNIS-YNVG 777
A E + S + + + +++ PEI +VG TE+ + I Y
Sbjct: 315 PVAIHEAXCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAE 374
Query: 778 IFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSED 837
P A R + + K++ + +++G HI+G A E I++ + +D
Sbjct: 375 FRPXKATLSGR---KEKTIXKLVVNAADRKVVGAHILGHDAGEXAQLLGISLRAGCTKDD 431
Query: 838 IARICHVHPSLSEAM 852
R VHP+ +E +
Sbjct: 432 FDRTXAVHPTAAEEL 446
>pdb|1DPC|A Chain A, Crystallographic And Enzymatic Investigations On The Role
Of Ser558, His610 And Asn614 In The Catalytic Mechanism
Of Azotobacter Vinelandii Dihydrolipoamide
Acetyltransferase (E2p)
Length = 243
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 76/225 (33%), Positives = 107/225 (47%), Gaps = 4/225 (1%)
Query: 156 PYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYK 215
P + + +EE VPM+RL A L +S N +T F ++ + R+ K
Sbjct: 2 PPIPPVDFAKYGEIEE-VPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQK 60
Query: 216 DKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASV--DGNNIIYHKYYDIGIAISSSRGL 273
EK VKL + +KA LK+ P N+S+ G +I KY IG A+ + GL
Sbjct: 61 AVAEKA-GVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGL 119
Query: 274 VVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIIN 333
+VP++RN D S+ + + E KA+ KL + M G FTIS+ G G TPI+N
Sbjct: 120 LVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVN 179
Query: 334 PPQSAILGVHAXXXXXXXXXXXXXXXXXXYFALSYDHRIIDGREA 378
P+ AILGV +LSYDHR+IDG A
Sbjct: 180 APEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVIDGAAA 224
>pdb|1EAA|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate
Dehydrogenase Multienzyme Complex
pdb|1EAB|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate
Dehydrogenase Multienzyme Complex
pdb|1EAC|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate
Dehydrogenase Multienzyme Complex
pdb|1EAD|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate
Dehydrogenase Multienzyme Complex
pdb|1EAE|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate
Dehydrogenase Multienzyme Complex
pdb|1EAF|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate
Dehydrogenase Multienzyme Complex
Length = 243
Score = 102 bits (255), Expect = 7e-22, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 4/225 (1%)
Query: 156 PYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYK 215
P + + +EE VPM+RL A L +S N +T F ++ + R+ K
Sbjct: 2 PPIPPVDFAKYGEIEE-VPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQK 60
Query: 216 DKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASV--DGNNIIYHKYYDIGIAISSSRGL 273
K+ VKL + +KA LK+ P N+S+ G +I KY IG A+ + GL
Sbjct: 61 -AVAKKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGL 119
Query: 274 VVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIIN 333
+VP++RN D S+ + + E KA+ KL + M G FTIS+ G G TPI+N
Sbjct: 120 LVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVN 179
Query: 334 PPQSAILGVHAXXXXXXXXXXXXXXXXXXYFALSYDHRIIDGREA 378
P+ AILGV +LSYDHR+I+G A
Sbjct: 180 APEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAA 224
>pdb|1DPD|A Chain A, Crystallographic And Enzymatic Investigations On The Role
Of Ser558, His610 And Asn614 In The Catalytic Mechanism
Of Azotobacter Vinelandii Dihydrolipoamide
Acetyltransferase (E2p)
Length = 243
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 4/225 (1%)
Query: 156 PYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYK 215
P + + +EE VPM+RL A L +S N +T F ++ + R+ K
Sbjct: 2 PPIPPVDFAKYGEIEE-VPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQK 60
Query: 216 DKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASV--DGNNIIYHKYYDIGIAISSSRGL 273
EK VKL + +KA LK+ P N+S+ G +I KY IG A+ + GL
Sbjct: 61 AVAEKA-GVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGL 119
Query: 274 VVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIIN 333
+VP++RN D S+ + + E KA+ KL + M G FTI++ G G TPI+N
Sbjct: 120 LVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTIASLGHIGGTAFTPIVN 179
Query: 334 PPQSAILGVHAXXXXXXXXXXXXXXXXXXYFALSYDHRIIDGREA 378
P+ AILGV +LSYDHR+I+G A
Sbjct: 180 APEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAA 224
>pdb|2IHW|A Chain A, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2IHW|B Chain B, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2IHW|C Chain C, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2IHW|D Chain D, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2IHW|E Chain E, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2IHW|F Chain F, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2IHW|G Chain G, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2IHW|H Chain H, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form
pdb|2II3|A Chain A, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II3|B Chain B, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II3|C Chain C, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II3|D Chain D, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II3|E Chain E, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II3|F Chain F, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II3|G Chain G, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II3|H Chain H, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Oxidized
Coenzyme A-Bound Form
pdb|2II4|A Chain A, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II4|B Chain B, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II4|C Chain C, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II4|D Chain D, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II4|E Chain E, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II4|F Chain F, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II4|G Chain G, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II4|H Chain H, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Coenzyme
A-Bound Form
pdb|2II5|A Chain A, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
pdb|2II5|B Chain B, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
pdb|2II5|C Chain C, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
pdb|2II5|D Chain D, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
pdb|2II5|E Chain E, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
pdb|2II5|F Chain F, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
pdb|2II5|G Chain G, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
pdb|2II5|H Chain H, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide
Acyltransferase (E2b) Component In The Branched-Chain
Alpha-Ketoacid Dehydrogenase Complex (Bckdc),
Isobutyryl-Coenzyme A-Bound Form
Length = 262
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 200 NEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGN--NIIY 257
+E+++ ++ LR + K +KL FM FF+KA L Q+PI+NASVD N NI Y
Sbjct: 60 DEVDLTELVKLREELK-PIAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITY 118
Query: 258 HKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTI 317
++IGIA+ + +GL+VP ++N SI +I ++N +L ++ GGTFT+
Sbjct: 119 KASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTL 178
Query: 318 SNGGVFGSMLSTPIINPPQSAILGVHAXXXXXXXXXXXXXXXXXXY-FALSYDHRIIDG 375
SN G G + P+I PP+ AI + + S DHRIIDG
Sbjct: 179 SNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDG 237
>pdb|3B8K|A Chain A, Structure Of The Truncated Human Dihydrolipoyl
Acetyltransferase (E2)
Length = 239
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 173 VPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFF 232
+P+S +R IA+RL+QS+ ++NM ++ +R + E K+ F
Sbjct: 15 IPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRS--KISVNDFI 72
Query: 233 VKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKK 292
+KA A + P N+S I + D+ +A+S+ GL+ PI+ NA + I
Sbjct: 73 IKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIAND 132
Query: 293 INEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAXXXXXXXX 352
+ KA++ KL P E GGTFTISN G+FG + IINPPQ+ IL + A
Sbjct: 133 VVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPA 192
Query: 353 XXXXXXXXXXYFA--LSYDHRIIDGREAVLSLMSF 385
+ LS DHR++DG L F
Sbjct: 193 DNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEF 227
>pdb|1DPB|A Chain A, Crystallographic And Enzymatic Investigations On The Role
Of Ser558, His610 And Asn614 In The Catalytic Mechanism
Of Azotobacter Vinelandii Dihydrolipoamide
Acetyltransferase (E2p)
Length = 243
Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 106/225 (47%), Gaps = 4/225 (1%)
Query: 156 PYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYK 215
P + + +EE VPM+RL A L +S N +T F ++ + R+ K
Sbjct: 2 PPIPPVDFAKYGEIEE-VPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQK 60
Query: 216 DKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASV--DGNNIIYHKYYDIGIAISSSRGL 273
EK VKL + +KA LK+ P N+S+ G +I KY IG A+ + GL
Sbjct: 61 AVAEKA-GVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGL 119
Query: 274 VVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIIN 333
+VP++RN D S+ + + E KA+ KL + M G FTIS+ G G TPI+N
Sbjct: 120 LVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVN 179
Query: 334 PPQSAILGVHAXXXXXXXXXXXXXXXXXXYFALSYDHRIIDGREA 378
P+ AILGV +LSYD R+I+G A
Sbjct: 180 APEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDCRVINGAAA 224
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 178/462 (38%), Gaps = 67/462 (14%)
Query: 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQ 448
+ +D I IG G G S L +G + +D W LGG+C + C+P
Sbjct: 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP------FLGGSCPHNACVPHHLFSD 95
Query: 449 TSHSFENVKNSFFEYGI-NTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGH 507
+ + +Y + + ++++++ HG
Sbjct: 96 CAAELMLARTFSGQYWFPDMTEKVVGIKEVVD----------------LFRAGRNGPHGI 139
Query: 508 AIFTGKIQNNFHEI----------QIINKTKETITAKYIIIATGSKARSF--PGVK---- 551
F K Q N I + + AK +I+A G+ + PGV
Sbjct: 140 MNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGPGTLDVPGVNAKGV 199
Query: 552 FDENLILSNKGALEMINVP-KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVD 610
FD ++ E+ P + ++G +E G + G +L + D
Sbjct: 200 FDHATLVE-----ELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKD 254
Query: 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIA 670
E + +QG+ II + + I+ + + + N + I T D + +
Sbjct: 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIET---DFVFLG 311
Query: 671 IGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIM 730
+G P + L +GL + ++VN+ +T++PN+YA+GD++ GPM KA + G
Sbjct: 312 LGEQPRSAEL-AKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCY 370
Query: 731 VAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKK--HNI-----------SYNVG 777
A ++ G+K S P ++T E++ +G E+ + H I NV
Sbjct: 371 AARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVA 430
Query: 778 IFPFLANSRARILGE----TSGMVKILSDMKSDEILGIHIIG 815
+ P + G+ SG KI+ D K+ ++LG H +G
Sbjct: 431 L-PASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVG 471
>pdb|3L60|A Chain A, Crystal Structure Of Branched-Chain Alpha-Keto Acid
Dehydrogenase Subunit E2 From Mycobacterium Tuberculosis
Length = 250
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 233 VKAVVSALKQYPIINA----SVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIAD 288
++ +V ALK I+N+ S +G + H+ +G ++ RGL+VP++ +A + +
Sbjct: 72 LRLLVIALKHNVILNSTWVDSGEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRE 131
Query: 289 IEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAXXXX 348
+ ++ E I A++ L P E+ G TFT+SN G G P+IN P++AILG+ A
Sbjct: 132 LASRVAELITGAREGTLTPAELRGSTFTVSNFGALGVDDGVPVINHPEAAILGLGAIKPR 191
Query: 349 XXXXXXXXXXXXXXYFALSYDHRIIDGRE 377
+DHR++DG +
Sbjct: 192 PVVVGGEVVARPTMTLTCVFDHRVVDGAQ 220
>pdb|1PMR|A Chain A, Lipoyl Domain From The Dihydrolipoyl Succinyltransferase
Component Of The 2-Oxoglutarate Dehydrogenase
Multienzyme Complex Of Escherichia Coli, Nmr, 25
Structures
Length = 80
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 56/72 (77%)
Query: 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63
+++ +P L ES+++AT+ WHKK G+ VVR+E L++IETDKV+LE+PA DGI++ ++
Sbjct: 3 VDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLED 62
Query: 64 DGSIVTSNQVIA 75
+G+ VTS Q++
Sbjct: 63 EGTTVTSRQILG 74
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 564 LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623
++M NV + ++G G IGLE+ LG + T+LE++ + VD E+A A +
Sbjct: 146 IQMNNV-EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRD 204
Query: 624 QGLNIILNTKIHDIKIN-KENVLINYSNKST---NVKTEIITSI-------FDKLLIAIG 672
QG+++ L T + ++ + +V + + + T ++K + ++ D L++AIG
Sbjct: 205 QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIG 264
Query: 673 RIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP----------MLAH 722
P T L D GL + E I VN +T+ P IYA+GD V LA
Sbjct: 265 VRPET-QLARDA-GLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAG 322
Query: 723 KAEEEGIMVAEHISGQKHSINFNALPFVIYTFP-EIASVGKTEQYLKKHNISYNVGIFPF 781
A +G M A+++ G++ + F + + GK E+ LK+ I++ ++
Sbjct: 323 PANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFE-KVYVH 381
Query: 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIG 815
A+ + G K+L D I G +G
Sbjct: 382 TASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVG 415
>pdb|1GHJ|A Chain A, Solution Structure Of The Lipoyl Domain Of The 2-
Oxoglutarate Dehydrogenase Complex From Azotobacter
Vineland Ii, Nmr, Minimized Average Structure
pdb|1GHK|A Chain A, Solution Structure Of The Lipoyl Domain Of The 2-
Oxoglutarate Dehydrogenase Complex From Azotobacter
Vineland Ii, Nmr, 25 Structures
Length = 79
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63
I++K P ESI++ T+ WHKK GE V R+E ++DIETDKV++E+ A DG+I +I+
Sbjct: 2 IDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKN 61
Query: 64 DGSIVTSNQVIA 75
+G V S +++
Sbjct: 62 EGDTVLSGELLG 73
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 518 FHEIQIINKTKETITA-------------KYIIIATGSKARSFPGVKFDENLILSNKGAL 564
+HE+ IN ++T++ +I++ G+ A S G + D L N
Sbjct: 77 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLRNLEDT 135
Query: 565 EMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
+ I N K+ ++GAG + LE+ G T++ S +D ++ +
Sbjct: 136 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPIL 195
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
L+K+ + LN +I+ I N+ I + KS V+ +D ++ +G PN+
Sbjct: 196 DELDKREIPYRLNEEINAINGNE----ITF--KSGKVEH------YDMIIEGVGTHPNSK 243
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPM----------LAHKAEEEG 728
I+ +K++ FI VND ETN+PNIYAIGD+ LA A
Sbjct: 244 F--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAA 301
Query: 729 IMVAEHISGQKHSINF------NALPFVIYTFPEIASVGKTEQYLKKHN 771
+VAE I+G +I F N + F YTF ASVG LK+ +
Sbjct: 302 SIVAEQIAGND-TIEFKGFLGNNIVKFFDYTF---ASVGVKPNELKQFD 346
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 518 FHEIQIINKTKETITA-------------KYIIIATGSKARSFPGVKFDENLILSNKGAL 564
+HE+ IN ++T++ +I++ G+ A S G + D L N
Sbjct: 77 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLRNLEDT 135
Query: 565 EMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
+ I N K+ ++GAG + LE+ G T++ S +D ++ +
Sbjct: 136 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPIL 195
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
L+K+ + LN +I+ I N+ I + KS V+ +D ++ +G PN+
Sbjct: 196 DELDKREIPYRLNEEINAINGNE----ITF--KSGKVEH------YDMIIEGVGTHPNSK 243
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPM----------LAHKAEEEG 728
I+ +K++ FI VND ETN+PNIYAIGD+ LA A
Sbjct: 244 F--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAA 301
Query: 729 IMVAEHISGQKHSINF------NALPFVIYTFPEIASVGKTEQYLKKHN 771
+VAE I+G +I F N + F YTF ASVG LK+ +
Sbjct: 302 SIVAEQIAGND-TIEFKGFLGNNIVKFFDYTF---ASVGVKPNELKQFD 346
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 518 FHEIQIINKTKETITA-------------KYIIIATGSKARSFPGVKFDENLILSNKGAL 564
+HE+ IN ++T++ +I++ G+ A S G + D L N
Sbjct: 77 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLRNLEDT 135
Query: 565 EMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
+ I N K+ ++GAG + LE+ G T++ S +D ++ +
Sbjct: 136 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPIL 195
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
L+K+ + LN +I+ I N+ I + KS V+ +D ++ +G PN+
Sbjct: 196 DELDKREIPYRLNEEINAINGNE----ITF--KSGKVEH------YDMIIEGVGTHPNSK 243
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPM----------LAHKAEEEG 728
I+ +K++ FI VND ETN+PNIYAIGD+ LA A
Sbjct: 244 F--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAA 301
Query: 729 IMVAEHISGQKHSINF------NALPFVIYTFPEIASVGKTEQYLKKHN 771
+VAE I+G +I F N + F YTF ASVG LK+ +
Sbjct: 302 SIVAEQIAGND-TIEFKGFLGNNIVKFFDYTF---ASVGVKPNELKQFD 346
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 518 FHEIQIINKTKETITA-------------KYIIIATGSKARSFPGVKFDENLILSNKGAL 564
+HE+ IN ++T++ +I++ G+ A S G + D L N
Sbjct: 78 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLRNLEDT 136
Query: 565 EMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
+ I N K+ ++GAG + LE+ G T++ S +D ++ +
Sbjct: 137 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPIL 196
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
L+K+ + LN +I+ I N+ I + KS V+ +D ++ +G PN+
Sbjct: 197 DELDKREIPYRLNEEINAINGNE----ITF--KSGKVEH------YDMIIEGVGTHPNSK 244
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPM----------LAHKAEEEG 728
I+ +K++ FI VND ETN+PNIYAIGD+ LA A
Sbjct: 245 F--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAA 302
Query: 729 IMVAEHISGQKHSINF------NALPFVIYTFPEIASVGKTEQYLKKHN 771
+VAE I+G +I F N + F YTF ASVG LK+ +
Sbjct: 303 SIVAEQIAGND-TIEFKGFLGNNIVKFFDYTF---ASVGVKPNELKQFD 347
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 518 FHEIQIINKTKETITA-------------KYIIIATGSKARSFPGVKFDENLILSNKGAL 564
+HE+ IN ++T++ +I++ G+ A S G + D L N
Sbjct: 77 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLRNLEDT 135
Query: 565 EMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
+ I N K+ ++GAG + LE+ G T++ S +D ++ +
Sbjct: 136 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPIL 195
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
L+K+ + LN +I+ I N+ I + KS V+ +D ++ +G PN+
Sbjct: 196 DELDKREIPYRLNEEINAINGNE----ITF--KSGKVEH------YDMIIEGVGTHPNSK 243
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPM----------LAHKAEEEG 728
I+ +K++ FI VND ETN+PNIYAIGD+ LA A
Sbjct: 244 F--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAA 301
Query: 729 IMVAEHISGQKHSINF------NALPFVIYTFPEIASVGKTEQYLKKHN 771
+VAE I+G +I F N + F YTF ASVG LK+ +
Sbjct: 302 SIVAEQIAGND-TIEFKGFLGNNIVKFFDYTF---ASVGVKPNELKQFD 346
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 518 FHEIQIINKTKETITA-------------KYIIIATGSKARSFPGVKFDENLILSNKGAL 564
+HE+ IN ++T++ +I++ G+ A S G + D L N
Sbjct: 77 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLRNLEDT 135
Query: 565 EMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
+ I N K+ ++GAG + LE+ G T++ S +D ++ +
Sbjct: 136 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPIL 195
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
L+K+ + LN +I+ I N+ I + KS V+ +D ++ +G PN+
Sbjct: 196 DELDKREIPYRLNEEINAINGNE----ITF--KSGKVEH------YDMIIEGVGTHPNSK 243
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPM----------LAHKAEEEG 728
I+ +K++ FI VND ETN+PNIYAIGD+ LA A
Sbjct: 244 F--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAA 301
Query: 729 IMVAEHISGQKHSINF------NALPFVIYTFPEIASVGKTEQYLKKHN 771
+VAE I+G +I F N + F YTF ASVG LK+ +
Sbjct: 302 SIVAEQIAGND-TIEFKGFLGNNIVKFFDYTF---ASVGVKPNELKQFD 346
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 518 FHEIQIINKTKETITA-------------KYIIIATGSKARSFPGVKFDENLILSNKGAL 564
+HE+ IN ++T++ +I++ G+ A S G + D L N
Sbjct: 77 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLRNLEDT 135
Query: 565 EMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618
+ I N K+ ++GAG + LE+ G T++ S +D ++ +
Sbjct: 136 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPIL 195
Query: 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678
L+K+ + LN +I+ I N+ I + KS V+ +D ++ +G PN+
Sbjct: 196 DELDKREIPYRLNEEINAINGNE----ITF--KSGKVEH------YDMIIEGVGTHPNSK 243
Query: 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPM----------LAHKAEEEG 728
I+ +K++ FI VND ETN+PNIYAIGD+ LA A
Sbjct: 244 F--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAA 301
Query: 729 IMVAEHISGQKHSINF------NALPFVIYTFPEIASVGKTEQYLKKHN 771
+VAE I+G +I F N + F YTF ASVG LK+ +
Sbjct: 302 SIVAEQIAGND-TIEFKGFLGNNIVKFFDYTF---ASVGVKPNELKQFD 346
>pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
Alpha-Ketoglutarate Decarboxylase Homodimer
(Orthorhombic Form)
pdb|2XT6|B Chain B, Crystal Structure Of Mycobacterium Smegmatis
Alpha-Ketoglutarate Decarboxylase Homodimer
(Orthorhombic Form)
Length = 1113
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 197 TTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIIN---ASVDGN 253
T+ I + +ID R+ + ++ K+ F A+V A+K++P +N A VDG
Sbjct: 12 TSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGK 71
Query: 254 -NIIYHKYYDIGIAIS-----SSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLP 307
I + ++G+AI +R LVV ++ +TM + + +A+D KL
Sbjct: 72 PTAITPAHTNLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTA 131
Query: 308 EEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAXXXXXXXXXXXXXXXXXX----- 362
E+ SG T +++N G G++ S P + Q AI+G A
Sbjct: 132 EDFSGVTISLTNPGTLGTVHSVPRLMQGQGAIIGAGAMEYPAEFQGASEERIADLGIGKL 191
Query: 363 -YFALSYDHRIIDGREA---VLSLMSFIMNKNF 391
+YDHRII G E+ + ++ +++ +F
Sbjct: 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDF 224
>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
Length = 574
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 25/263 (9%)
Query: 575 IIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKI 634
++G G IGLE LG + T+LE++ VD E A A + QG+++ L T +
Sbjct: 156 VVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGTAL 215
Query: 635 HDIKIN-KENVLINYSNKST---NVKTEIITSI-------FDKLLIAIGRIPNTNNLNID 683
++ + +V + + + T ++K + ++ D L+ AIG P T L D
Sbjct: 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPET-QLARD 274
Query: 684 KIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP----------MLAHKAEEEGIMVAE 733
GL + E I VN +T+ P IYA+GD V LA A +G A+
Sbjct: 275 A-GLAIGELGGIKVNAXXQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRXAAD 333
Query: 734 HISGQKHSINFNALPFVIYTFP-EIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGE 792
+ G++ + F + + GK E+ LK+ I++ ++ A+ + G
Sbjct: 334 NXFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFE-KVYVHTASHASYYPGA 392
Query: 793 TSGMVKILSDMKSDEILGIHIIG 815
K+L D I G +G
Sbjct: 393 EVVSFKLLFDPVKGTIFGAQAVG 415
>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
Length = 574
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 25/264 (9%)
Query: 574 CIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTK 633
++G G IGLE LG + T+LE++ VD E A A + QG+++ L T
Sbjct: 155 TVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGTA 214
Query: 634 IHDIKIN-KENVLINYSNKST---NVKTEIITSI-------FDKLLIAIGRIPNTNNLNI 682
+ ++ + +V + + + T ++K + ++ D L+ AIG P T L
Sbjct: 215 LSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPET-QLAR 273
Query: 683 DKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP----------MLAHKAEEEGIMVA 732
D GL + E I VN +T+ P IYA+GD V LA A +G A
Sbjct: 274 DA-GLAIGELGGIKVNAXXQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRXAA 332
Query: 733 EHISGQKHSINFNALPFVIYTFP-EIASVGKTEQYLKKHNISYNVGIFPFLANSRARILG 791
++ G++ + F + + GK E+ LK+ I++ ++ A+ + G
Sbjct: 333 DNXFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFE-KVYVHTASHASYYPG 391
Query: 792 ETSGMVKILSDMKSDEILGIHIIG 815
K+L D I G +G
Sbjct: 392 AEVVSFKLLFDPVKGTIFGAQAVG 415
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 530 TITAKYIIIATGSKARS--FPGVKFDENLILSNKGALEMI----NVPKKLCIIGAGVIGL 583
T++A I+IATGS+AR+ PG + + L G ++++ +L I+G G+IG
Sbjct: 97 TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGC 156
Query: 584 EIGSIWRRLGSEVTILEMSSNFL-NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKE 642
E+ + R+LG VTILE L + I LL + G+ + L T + + + E
Sbjct: 157 EVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGV--VGFSGE 214
Query: 643 NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE 702
L + ++ + + D LI +G P + GL + ++ D+C
Sbjct: 215 GQLEQV------MASDGRSFVADSALICVGAEPADQLAR--QAGLACDRG---VIVDHCG 263
Query: 703 TNIP-NIYAIGDVVRGPMLA 721
+ ++A+GDV P+ A
Sbjct: 264 ATLAKGVFAVGDVASWPLRA 283
>pdb|2L5T|A Chain A, Solution Nmr Structure Of E2 Lipoyl Domain From
Thermoplasma Acidophilum
Length = 77
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 50/77 (64%)
Query: 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIII 62
+ E K+P + E ++E ++ W KEG++V ++++L+++ TDKV +++P+P G I KI+
Sbjct: 1 MYEFKLPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILY 60
Query: 63 TDGSIVTSNQVIALIDT 79
+G +V + IDT
Sbjct: 61 REGQVVPVGSTLLQIDT 77
>pdb|1ZY8|K Chain K, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|L Chain L, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|M Chain M, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|N Chain N, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|O Chain O, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 229
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 29/165 (17%)
Query: 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63
I++ +P LS ++ E ++ W KKEGE V + L +IETDK ++ L A DGI+ KI++
Sbjct: 4 IKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVE 63
Query: 64 DGSI-VTSNQVIALIDTD------------------ISKLSSKTE---------IKNKKD 95
+GS + +I LI + +SK S +K +
Sbjct: 64 EGSKNIRLGSLIGLIVEEGEDWKHVEIPKDVGPPPPVSKPSEPRPSPEPQISIPVKKEHI 123
Query: 96 IKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140
L + P+A+ IL ++L+ S+ TG G KED LK++
Sbjct: 124 PGTLRFRLSPAARNILEKHSLDASQ-GTATGPRGIFTKEDALKLV 167
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 49/331 (14%)
Query: 520 EIQIINKTKETITAK-------------YIIIATGSKA--RSFPGVKFDENLI-LSNKGA 563
E+ INK ++TIT K +I++ G+K S PG++ + L L N
Sbjct: 115 EVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPD 174
Query: 564 LEMINV------PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKA 617
+ I P+ +IG G IG+E R G EVT++E ++ +D E A
Sbjct: 175 TDRIKAYIDEKKPRHATVIGGGFIGVEXVENLRERGIEVTLVEXANQVXPPIDYEXAAYV 234
Query: 618 FHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677
+ ++ + + +EN + + ++T D L++AIG P +
Sbjct: 235 HEHXKNHDVELVFEDGVDAL---EENGAVVRLKSGSVIQT-------DXLILAIGVQPES 284
Query: 678 NNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP----------MLAHKAEEE 727
+ GL + I VN+ +T+ P+IYAIGD + LA A +
Sbjct: 285 SLAK--GAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETXIPLAWPANRQ 342
Query: 728 GIMVAEHISGQKHSINFNALPFVIYTFPE--IASVGKTEQYLKKHNISYNVGIFPFLANS 785
G +A+ I G S+ L + + +A+ G E+ LK+ NI Y V ANS
Sbjct: 343 GRXLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEV--VHVQANS 400
Query: 786 RARIL-GETSGMVKILSDMKSDEILGIHIIG 815
A T ++K++ + S +I G +G
Sbjct: 401 HAGYYPNATPVLIKLIFNKDSGKIYGAQTLG 431
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 29/202 (14%)
Query: 526 KTKETITAKY--IIIATGSK-------ARSFPGVKF-----DENLILSNKGALEMINVPK 571
KTK+ Y ++IATG + R GV D IL LE N +
Sbjct: 132 KTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKT---LE-TNKVE 187
Query: 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILN 631
+ IIG G IGLE+ + LG +V ++E + + D ++A+ + +K + I+ N
Sbjct: 188 DVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTN 247
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNE 691
+ K N+ + V+T+ T D +L+++G PNT+ L + ++ N
Sbjct: 248 ENVKAFKGNE---------RVEAVETDKGTYKADLVLVSVGVKPNTDFL--EGTNIRTNH 296
Query: 692 NNFIIVNDNCETNIPNIYAIGD 713
I VN +TN+ ++YA GD
Sbjct: 297 KGAIEVNAYMQTNVQDVYAAGD 318
>pdb|2DNC|A Chain A, Solution Structure Of Rsgi Ruh-054, A Lipoyl Domain From
Human 2-Oxoacid Dehydrogenase
Length = 98
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63
I++ +P LS ++ E ++ W KKEGE V + L +IETDK ++ L A DGI+ KI++
Sbjct: 8 IKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVE 67
Query: 64 DGS 66
+GS
Sbjct: 68 EGS 70
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 507 HAIFTGKIQNNFHEIQIINKTK---------ETITAKYIIIATGSKARSFPGVKFDENLI 557
HA KI+ E++ I KT+ +T AKY+II TG+ + GVK +
Sbjct: 81 HAANYAKIREGV-EVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTHKHL-GVKGESEYF 138
Query: 558 LSNKGALEMIN----VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--NTVDE 611
+ K++ IG G G VTI+E ++ N +
Sbjct: 139 GKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQ 198
Query: 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIA 670
EI K+ + I+N ++ +I + + V + Y +++T + I T D + I
Sbjct: 199 EI--------KKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIET---DGVFIY 247
Query: 671 IGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG 717
+G IP T+ L G+K++E +I+V+ T++P +YA GDV G
Sbjct: 248 VGLIPQTSFLK--DSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSG 292
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 43/369 (11%)
Query: 514 IQNNFHEIQIIN-KTKETITAKY--IIIATGSKARSFP--GVKFDENLILSNKGALEMIN 568
I H ++I N +T E T KY +++A GSKA P G+ ++N E +
Sbjct: 92 IDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQ 151
Query: 569 VP------KKLCIIGAGVIGLEIG-SIWRRLGSEVTILEMSSNFL-NTVDEEIAKKAFHL 620
K I+G G IGLE+ S+ G + T++E++ + + +++ H
Sbjct: 152 HAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHD 211
Query: 621 LNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNL 680
L K +++++T +++ EN K V T+ T D +++A G PNT L
Sbjct: 212 LEKN--DVVVHTGEKVVRLEGEN------GKVARVITDKRTLDADLVILAAGVSPNTQ-L 262
Query: 681 NIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP----------MLAHKAEEEGIM 730
D GL+++ IIV+ T+ P+I+A GD V P L A +G +
Sbjct: 263 ARDA-GLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRV 321
Query: 731 VAEHISGQKHSINFNALPFVIYTFPEIAS-VGKT-EQYLKKHNISYNVGIFPFLANSRAR 788
+ +++ + + + F AS G T E L++ + NV + F RA
Sbjct: 322 IGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQF---DRAH 378
Query: 789 ILGETSGM-VKILSDMKSDEILGIHIIGPMASELIAE---AVIAIEFRASSEDIARICHV 844
E + M ++++ D + +LGI + L A + + + EDI+ V
Sbjct: 379 FYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVV 438
Query: 845 H-PSLSEAM 852
+ P + AM
Sbjct: 439 YSPPFASAM 447
>pdb|1Q1R|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1R|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
Length = 431
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 517 NFHEIQIINKTKETITAKYIIIATGSKARSFPGV-----KFDENLILSNKGALEMIN--- 568
N Q+I + +++ATG + R P K + L E I
Sbjct: 87 NRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL 146
Query: 569 -VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF-HLLNKQGL 626
+L +IG G IGLE+ + + VT+L+ ++ L V + HL + G+
Sbjct: 147 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGV 206
Query: 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIA-IGRIPNTNNLNIDKI 685
+I T++ +++ + K T V E T + L+IA IG IPN +
Sbjct: 207 DIRTGTQVCGFEMSTDQ------QKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS--AA 258
Query: 686 GLKVNENNFIIVNDNCETNIPNIYAIGDVVR 716
GL+V +N I++N++ +T+ P I A+GD R
Sbjct: 259 GLQV--DNGIVINEHMQTSDPLIMAVGDCAR 287
>pdb|3LB8|A Chain A, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|B Chain B, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 436
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 517 NFHEIQIINKTKETITAKYIIIATGSKARSFPGV-----KFDENLILSNKGALEMIN--- 568
N Q+I + +++ATG + R P K + L E I
Sbjct: 86 NRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL 145
Query: 569 -VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF-HLLNKQGL 626
+L +IG G IGLE+ + + VT+L+ ++ L V + HL + G+
Sbjct: 146 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGV 205
Query: 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIA-IGRIPNTNNLNIDKI 685
+I T++ +++ + K T V E T + L+IA IG IPN +
Sbjct: 206 DIRTGTQVCGFEMSTDQ------QKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS--AA 257
Query: 686 GLKVNENNFIIVNDNCETNIPNIYAIGDVVR 716
GL+V +N I++N++ +T+ P I A+GD R
Sbjct: 258 GLQV--DNGIVINEHMQTSDPLIMAVGDCAR 286
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Query: 526 KTKETITAKY--IIIATGSK-------ARSFPGVKF-----DENLILSNKGALEMINVPK 571
KTK+ Y ++IATG + R GV D IL LE N +
Sbjct: 132 KTKDVFEFSYDRLLIATGVRPVXPEWEGRDLQGVHLLKTIPDAERILK---TLET-NKVE 187
Query: 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILN 631
+ IIG G IGLE + LG +V +E + + D + A+ + +K + I+ N
Sbjct: 188 DVTIIGGGAIGLEXAETFVELGKKVRXIERNDHIGTIYDGDXAEYIYKEADKHHIEILTN 247
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNE 691
+ K N+ + V+T+ T D +L+++G PNT+ L + ++ N
Sbjct: 248 ENVKAFKGNE---------RVEAVETDKGTYKADLVLVSVGVKPNTDFL--EGTNIRTNH 296
Query: 692 NNFIIVNDNCETNIPNIYAIGD 713
I VN +TN+ ++YA GD
Sbjct: 297 KGAIEVNAYXQTNVQDVYAAGD 318
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 515 QNNFHEIQIINKTKETITAKYIIIATGSKARSF--PGVKFDENLILSNKGALEMINVP-- 570
+ H+I+ + + A+ IIIATG+K R+ PG ++ + P
Sbjct: 299 EGGLHQIE--TASGAVLKARSIIIATGAKWRNMNVPG---EDQYRTKGVTYCPHCDGPLF 353
Query: 571 --KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628
K++ +IG G G+E + VT+LE + D+ + K L N ++I
Sbjct: 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM--KADQVLQDKVRSLKN---VDI 408
Query: 629 ILNTKIHDIKINKENVL-INYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIG 686
ILN + ++K + V+ + Y ++ S ++ + + IF + IG +PNT+ L +
Sbjct: 409 ILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIF----VQIGLLPNTHWL---EGA 461
Query: 687 LKVNENNFIIVNDNCETNIPNIYAIGDVVRGP 718
L+ N II++ CET++ ++A GD P
Sbjct: 462 LERNRMGEIIIDAKCETSVKGVFAAGDCTTVP 493
>pdb|2Q7V|A Chain A, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
pdb|2Q7V|B Chain B, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
Length = 325
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 533 AKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVP------KKLCIIGAGVIGLEIG 586
AK +I+ATG+ R G+ ++N KG KK+ +IG G +E G
Sbjct: 112 AKAVILATGADPRKL-GIPGEDNFW--GKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEG 168
Query: 587 SIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLI 646
+ EVT++ +T+ +A N + + I +T + +I+ +
Sbjct: 169 MFLTKFADEVTVIHRR----DTLRANKVAQARAFANPK-MKFIWDTAVEEIQGADSVSGV 223
Query: 647 NYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIP 706
N T +E+ T D + I IG +PNT + D + L+ ++ ++ V D TNIP
Sbjct: 224 KLRNLKTGEVSELAT---DGVFIFIGHVPNTAFVK-DTVSLR--DDGYVDVRDEIYTNIP 277
Query: 707 NIYAIGDV 714
++A GDV
Sbjct: 278 MLFAAGDV 285
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 383 MSFIMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDE--------WKDNEENF 429
M+ ++DV++IG GP G A+I + T +++ W + ENF
Sbjct: 1 MTAPTAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENF 55
>pdb|1LAB|A Chain A, Three-Dimensional Structure Of The Lipoyl Domain From
Bacillus Stearothermophilus Pyruvate Dehydrogenase
Multienzyme Complex
pdb|1LAC|A Chain A, Three-Dimensional Structure Of The Lipoyl Domain From
Bacillus Stearothermophilus Pyruvate Dehydrogenase
Multienzyme Complex
Length = 80
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 45/74 (60%)
Query: 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITD 64
E K+P + E I E ++ W K G+ V ++ L +++ DK ++E+P+P G + +I++ +
Sbjct: 3 EFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPE 62
Query: 65 GSIVTSNQVIALID 78
G++ T Q + +D
Sbjct: 63 GTVATVGQTLITLD 76
>pdb|1FL2|A Chain A, Catalytic Core Component Of The Alkylhydroperoxide
Reductase Ahpf From E.Coli
Length = 310
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 514 IQNNFHEIQIINKTKETITAKYIIIATGSKARSF--PGVKFDENLILSNKGALEMINVP- 570
++ H+I+ + + A+ II+ATG+K R+ PG ++ + P
Sbjct: 87 VEGGLHQIE--TASGAVLKARSIIVATGAKWRNMNVPG---EDQYRTKGVTYCPHCDGPL 141
Query: 571 ---KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627
K++ +IG G G+E + VT+LE + D+ + K L N ++
Sbjct: 142 FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM--KADQVLQDKLRSLKN---VD 196
Query: 628 IILNTKIHDIKINKENVL-INYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKI 685
IILN + ++K + V+ + Y ++ S ++ + IF + IG +PNTN L +
Sbjct: 197 IILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIF----VQIGLLPNTNWL---EG 249
Query: 686 GLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP 718
++ N II++ CETN+ ++A GD P
Sbjct: 250 AVERNRMGEIIIDAKCETNVKGVFAAGDCTTVP 282
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 28/257 (10%)
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-NTVDEEIAKKAFHLLNKQGLNII 629
K++ ++GAG IG+E+ ++R G EV ++++ L D ++ + + G+ +
Sbjct: 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLA 254
Query: 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
+ ++ N K + T+ D +++A+G PNT L KI L
Sbjct: 255 FGETVKEVAGN---------GKVEKIITDKNEYDVDMVILAVGFRPNT-TLGNGKIDL-- 302
Query: 690 NENNFIIVNDNCETNIPNIYAIGD-------VVRGP---MLAHKAEEEGIMVAEHISGQK 739
N +VN ET+IP +YAIGD R LA A GI+ A + G
Sbjct: 303 FRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362
Query: 740 -HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARIL--GETSGM 796
I + + S G T + K+ + ++ + + N + + G
Sbjct: 363 LEGIGVQGSNGISIYGLHMVSTGLTLEKAKR--LGFDAAVTEYTDNQKPEFIEHGNFPVT 420
Query: 797 VKILSDMKSDEILGIHI 813
+KI+ D S ILG +
Sbjct: 421 IKIVYDKDSRRILGAQM 437
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 28/257 (10%)
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-NTVDEEIAKKAFHLLNKQGLNII 629
K++ ++GAG IG+E+ ++R G EV ++++ L D ++ + + G+ +
Sbjct: 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLA 254
Query: 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
+ ++ N K + T+ D +++A+G PNT L KI L
Sbjct: 255 FGETVKEVAGN---------GKVEKIITDKNEYDVDMVILAVGFRPNT-TLGNGKIDL-- 302
Query: 690 NENNFIIVNDNCETNIPNIYAIGD-------VVRGP---MLAHKAEEEGIMVAEHISGQK 739
N +VN ET+IP +YAIGD R LA A GI+ A + G
Sbjct: 303 FRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362
Query: 740 -HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARIL--GETSGM 796
I + + S G T + K+ + ++ + + N + + G
Sbjct: 363 LEGIGVQGSNGISIYGLHMVSTGLTLEKAKR--LGFDAAVTEYTDNQKPEFIEHGNFPVT 420
Query: 797 VKILSDMKSDEILGIHI 813
+KI+ D S ILG +
Sbjct: 421 IKIVYDKDSRRILGAQM 437
>pdb|2GR3|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
Length = 408
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 127/290 (43%), Gaps = 46/290 (15%)
Query: 529 ETITAKYIIIATGSKARSFP---GVKFDENLILSNKGALEM---INVPKKLCIIGAGVIG 582
T+ +++ATG+ R+ P G + + + + A + + +L I+G GVIG
Sbjct: 98 RTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIG 157
Query: 583 LEIGSIWRRLGSEVTILE-----MSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDI 637
LE+ + R G V+++E MS T+ + +A+ +H QG+++ +
Sbjct: 158 LELAATARTAGVHVSLVETQPRLMSRAAPATLADFVAR--YH--AAQGVDLRFERSVTG- 212
Query: 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIV 697
+ + V++ + T + +++ ++ IG + N+ GL ++ I V
Sbjct: 213 --SVDGVVL--LDDGTRIAADMV-------VVGIGVL--ANDALARAAGLACDDG--IFV 257
Query: 698 NDNCETNIPNIYAIGDVV--RGPMLAH--------KAEEEGIMVAEHISGQKHSINFNAL 747
+ T P++YA+GDV R P+ A+ +GI VA H+ + + L
Sbjct: 258 DAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV-DPTAPGYAEL 316
Query: 748 PFVIYTFP----EIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGET 793
P+ ++A + ++ + + +S + F + + RI+G T
Sbjct: 317 PWYFSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGAT 366
>pdb|1D7Y|A Chain A, Crystal Structure Of Nadh-Dependent Ferredoxin Reductase,
Bpha4
pdb|1F3P|A Chain A, Ferredoxin Reductase (Bpha4)-Nadh Complex
pdb|2GQW|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2GR0|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (oxidized
Form, Nad+ Complex)
pdb|2GR1|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Hydroquinone)
pdb|2GR2|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2YVF|A Chain A, Crystal Structure Of Ferredoxin Reductase Bpha4
(Hydroquinone)
pdb|2YVG|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Blue-Semiquinone)
pdb|2YVJ|A Chain A, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
pdb|2YVJ|P Chain P, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
Length = 408
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 127/290 (43%), Gaps = 46/290 (15%)
Query: 529 ETITAKYIIIATGSKARSFP---GVKFDENLILSNKGALEM---INVPKKLCIIGAGVIG 582
T+ +++ATG+ R+ P G + + + + A + + +L I+G GVIG
Sbjct: 98 RTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIG 157
Query: 583 LEIGSIWRRLGSEVTILE-----MSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDI 637
LE+ + R G V+++E MS T+ + +A+ +H QG+++ +
Sbjct: 158 LELAATARTAGVHVSLVETQPRLMSRAAPATLADFVAR--YH--AAQGVDLRFERSVTG- 212
Query: 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIV 697
+ + V++ + T + +++ ++ IG + N+ GL ++ I V
Sbjct: 213 --SVDGVVL--LDDGTRIAADMV-------VVGIGVL--ANDALARAAGLACDDG--IFV 257
Query: 698 NDNCETNIPNIYAIGDVV--RGPMLAH--------KAEEEGIMVAEHISGQKHSINFNAL 747
+ T P++YA+GDV R P+ A+ +GI VA H+ + + L
Sbjct: 258 DAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV-DPTAPGYAEL 316
Query: 748 PFVIYTFP----EIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGET 793
P+ ++A + ++ + + +S + F + + RI+G T
Sbjct: 317 PWYWSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGAT 366
>pdb|4A5L|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A5L|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A65|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
pdb|4A65|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 65/340 (19%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKAL 446
M+ DV++IG+GP + A+I L + K E F GG + +
Sbjct: 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMY-------EGFMAGG-------VAAGGQ 46
Query: 447 LQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHG 506
L T+ EN F GI+ + +N++ E+ +G
Sbjct: 47 LTTTTIIENFPG--FPNGIDGNELMMNMRTQSEK------------------------YG 80
Query: 507 HAIFTGKIQN---NFHEIQIINKTKETITAKYIIIATGSKARSF--PGV-KFDENLILSN 560
I T I + + ++ + + + K +IIATG+ A+ PG K+ +N + +
Sbjct: 81 TTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSAC 140
Query: 561 K---GALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--NTVDEEIAK 615
GA+ + K L ++G G +E + GS+V IL F T+ E +
Sbjct: 141 AICDGAVPIFR-NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERV-- 197
Query: 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675
LN + +I N+++ +++ + L+N + V E L AIG P
Sbjct: 198 -----LNHPKIEVIWNSEL--VELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSP 250
Query: 676 NTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVV 715
N+ L +K ++ +I+ + +T++ ++A GDV
Sbjct: 251 NSKFLGGQ---VKTADDGYIL-TEGPKTSVDGVFACGDVC 286
>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
Pfu-1140779- 001
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 536 IIIATGSKARSFPGVKFDENL-----ILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWR 590
+++ATG++AR P +K E L I E I + IIG G IGLE+
Sbjct: 105 LVLATGARARE-PQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLA 163
Query: 591 RLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSN 650
G V ++ + FL +DEE++ +L + G+ LN+++ ++ N+E VL N
Sbjct: 164 EAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSEL--LEANEEGVLTNSGF 220
Query: 651 KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYA 710
VK + AIG +PN + I + I+++DN T+ ++YA
Sbjct: 221 IEGKVK-----------ICAIGIVPNVDLARRSGI----HTGRGILIDDNFRTSAKDVYA 265
Query: 711 IGDVVRGPML----AHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFP--EIASVGKTE 764
IGD + A A E+ ++A+ + G+ NF ++ F +IA +G T+
Sbjct: 266 IGDCAEYSGIIAGTAKAAMEQARVLADILKGEPRRYNFK-FRSTVFKFGKLQIAIIGNTK 324
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL 630
K +IG G IGLE ++ + G VT+LE L V E A F+ + + L
Sbjct: 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGE-ALSEFYQAEHRAHGVDL 211
Query: 631 NTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIPNTNNLNIDKIGLKV 689
T I + K T V+ + + I D +++ IG +P L I
Sbjct: 212 RTGAAMDCIEGDG------TKVTGVRMQDGSVIPADIVIVGIGIVPCVGAL----ISAGA 261
Query: 690 NENNFIIVNDNCETNIPNIYAIGD 713
+ N + V++ C T++ ++YAIGD
Sbjct: 262 SGGNGVDVDEFCRTSLTDVYAIGD 285
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 129/334 (38%), Gaps = 67/334 (20%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALL 447
+ FDVI++G GP Y A++ A+ KT I E GG T G + L
Sbjct: 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGE--------TPGGQLTEAGIVDDYLGL 64
Query: 448 QTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGH 507
+ + +K F I V + L ++E
Sbjct: 65 IEIQASDMIK--VFNKHIEKYEVPV-LLDIVE---------------------------- 93
Query: 508 AIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMI 567
KI+N E + K K A +I+ G K R GV ++ +
Sbjct: 94 -----KIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKL-GVPGEQEFAGRGISYCSVA 147
Query: 568 NVP----KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF-LNTVDEEIAKKAFHLLN 622
+ P + + +IG G LE I ++V ++ F + E KK
Sbjct: 148 DAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKK------ 201
Query: 623 KQGLNIILNTKIHDIKINK--ENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIPNTNN 679
K + +LN+ + +IK +K + V++ N+KT I + + + I IG P T+
Sbjct: 202 KPNVEFVLNSVVKEIKGDKVVKQVVVE------NLKTGEIKELNVNGVFIEIGFDPPTDF 255
Query: 680 LNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGD 713
+ G++ + N +I V++ T++P ++A GD
Sbjct: 256 AKSN--GIETDTNGYIKVDEWMRTSVPGVFAAGD 287
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 129/334 (38%), Gaps = 67/334 (20%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALL 447
+ FDVI++G GP Y A++ A+ KT I E GG T G + L
Sbjct: 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGE--------TPGGQLTEAGIVDDYLGL 64
Query: 448 QTSHSFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGH 507
+ + +K F I V + L ++E
Sbjct: 65 IEIQASDMIK--VFNKHIEKYEVPV-LLDIVE---------------------------- 93
Query: 508 AIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMI 567
KI+N E + K K A +I+ G K R GV ++ +
Sbjct: 94 -----KIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKL-GVPGEQEFAGRGISYCSVC 147
Query: 568 NVP----KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF-LNTVDEEIAKKAFHLLN 622
+ P + + +IG G LE I ++V ++ F + E KK
Sbjct: 148 DAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKK------ 201
Query: 623 KQGLNIILNTKIHDIKINK--ENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIPNTNN 679
K + +LN+ + +IK +K + V++ N+KT I + + + I IG P T+
Sbjct: 202 KPNVEFVLNSVVKEIKGDKVVKQVVVE------NLKTGEIKELNVNGVFIEIGFDPPTDF 255
Query: 680 LNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGD 713
+ G++ + N +I V++ T++P ++A GD
Sbjct: 256 AKSN--GIETDTNGYIKVDEWMRTSVPGVFAAGD 287
>pdb|1Y8N|B Chain B, Crystal Structure Of The Pdk3-L2 Complex
pdb|1Y8O|B Chain B, Crystal Structure Of The Pdk3-L2 Complex
pdb|1Y8P|B Chain B, Crystal Structure Of The Pdk3-L2 Complex
pdb|2Q8I|B Chain B, Pyruvate Dehydrogenase Kinase Isoform 3 In Complex With
Antitumor Drug Radicicol
pdb|2PNR|C Chain C, Crystal Structure Of The Asymmetric Pdk3-L2 Complex
pdb|2PNR|G Chain G, Crystal Structure Of The Asymmetric Pdk3-L2 Complex
Length = 128
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63
++V +P LS +++ T+ W KK GE + + L +IETDK + ++G + KI++
Sbjct: 28 MQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVP 87
Query: 64 DGS----IVTSNQVIALIDTDISKLSS--KTEIKNKK 94
+G+ + T +I + DIS + TE+ + K
Sbjct: 88 EGTRDVPLGTPLCIIVEKEADISAFADYRPTEVTDLK 124
>pdb|1FYC|A Chain A, Inner Lipoyl Domain From Human Pyruvate Dehydrogenase
(Pdh) Complex, Nmr, 1 Structure
Length = 106
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63
++V +P LS +++ T+ W KK GE + + L +IETDK + ++G + KI++
Sbjct: 10 MQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVP 69
Query: 64 DGS----IVTSNQVIALIDTDISKLSS--KTEIKNKK 94
+G+ + T +I + DIS + TE+ + K
Sbjct: 70 EGTRDVPLGTPLCIIVEKEADISAFADYRPTEVTDLK 106
>pdb|3FG2|P Chain P, Crystal Structure Of Ferredoxin Reductase For The Cyp199a2
System From Rhodopseudomonas Palustris
Length = 404
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 535 YIIIATGSKAR-------SFPGVKF----DENLILSNKGALEMINVPKKLCIIGAGVIGL 583
++++ATG++ R S P V + DE+ +L + + K + +IGAG IGL
Sbjct: 101 HLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQR-----MPDKKHVVVIGAGFIGL 155
Query: 584 EIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKEN 643
E + R G EV ++E++ + V FH G I ++ + +I E
Sbjct: 156 EFAATARAKGLEVDVVELAPRVMARVVTPEISSYFH-DRHSGAGIRMHYGVRATEIAAEG 214
Query: 644 VLINYSNKSTNVK-TEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE 702
++ T V ++ T D +++ +G IPN + IIV+
Sbjct: 215 ------DRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG----IIVDQQLL 264
Query: 703 TNIPNIYAIGD 713
T+ P+I AIGD
Sbjct: 265 TSDPHISAIGD 275
>pdb|2COO|A Chain A, Solution Structure Of The E3_binding Domain Of
Dihydrolipoamide Branched Chaintransacylase
Length = 70
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 94 KDIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140
++IK T+ P+ +++ +NN+++S++ G+GKDGRI+KED+L L
Sbjct: 9 QEIKGRKTLATPAVRRLAMENNIKLSEVV-GSGKDGRILKEDILNYL 54
>pdb|4GCM|A Chain A, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
pdb|4GCM|B Chain B, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
Length = 312
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 520 EIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVP----KKLCI 575
E ++IN + +TAK +IIATG++ + GV ++ L + + K+L +
Sbjct: 92 EYKVINFGNKELTAKAVIIATGAEYKKI-GVPGEQELGGRGVSYCAVCDGAFFKNKRLFV 150
Query: 576 IGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKI- 634
IG G +E G+ + +VTI+ +A +L + N KI
Sbjct: 151 IGGGDSAVEEGTFLTKFADKVTIVHRRDEL----------RAQRILQDRAFK---NDKID 197
Query: 635 ----HDIK-INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
H +K IN+++ + ++ T D + I IG P T +G+
Sbjct: 198 FIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGXKPLTAPFK--DLGI-T 254
Query: 690 NENNFIIVNDNCETNIPNIYAIGDV 714
N+ +I+ D+ T++P I+A GDV
Sbjct: 255 NDVGYIVTKDDXTTSVPGIFAAGDV 279
>pdb|3CRK|C Chain C, Crystal Structure Of The Pdhk2-L2 Complex.
pdb|3CRK|D Chain D, Crystal Structure Of The Pdhk2-L2 Complex.
pdb|3CRL|C Chain C, Crystal Structure Of The Pdhk2-L2 Complex.
pdb|3CRL|D Chain D, Crystal Structure Of The Pdhk2-L2 Complex
Length = 87
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63
++V +P LS +++ T+ W KK GE + + L +IETD + ++G + KI++
Sbjct: 6 MQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVP 65
Query: 64 DGS 66
+G+
Sbjct: 66 EGT 68
>pdb|1ZWV|A Chain A, Solution Structure Of The Subunit Binding Domain (Hbsbd)
Of The Human Mitochondrial Branched-Chain Alpha-Ketoacid
Dehydrogenase
Length = 58
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 95 DIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140
+IK T+ P+ +++ +NN+++S++ G+GKDGRI+KED+L L
Sbjct: 2 EIKGRKTLATPAVRRLAMENNIKLSEVV-GSGKDGRILKEDILNYL 46
>pdb|1K8O|A Chain A, Solution Structure Of The Lipoic Acid-Bearing Domain Of
The E2 Component Of Human, Mitochondrial Branched-Chain
Alpha- Ketoacid Dehydrogenase
pdb|1K8M|A Chain A, Solution Structure Of The Lipoic Acid-Bearing Domain Of
The E2 Component Of Human, Mitochondrial Branched-Chain
Alpha- Ketoacid Dehydrogenase
Length = 93
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIII 62
+++ K+ + E I E T+ W+ KEG+ V + +++ ++++DK + + + DG+I K+
Sbjct: 4 VVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYY 63
Query: 63 TDGSIVTSNQVIALIDTDISK 83
I + + I+T+ K
Sbjct: 64 NLDDIAYVGKPLVDIETEALK 84
>pdb|2DNE|A Chain A, Solution Structure Of Rsgi Ruh-058, A Lipoyl Domain Of
Human 2-Oxoacid Dehydrogenase
Length = 108
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITD 64
+V +P LS ++ T+ W KKEG+ + + + ++ETDK + + ++ + KI++ +
Sbjct: 9 KVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAE 68
Query: 65 GS 66
G+
Sbjct: 69 GT 70
>pdb|3RNM|E Chain E, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|F Chain F, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 58
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 95 DIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140
+IK T+ P+ + + +NN+++S++ G+GKDGRI+KED+L L
Sbjct: 2 EIKGRKTLATPAVRNLAMENNIKLSEVV-GSGKDGRILKEDILNYL 46
>pdb|2E1M|A Chain A, Crystal Structure Of L-Glutamate Oxidase From Streptomyces
Sp. X-119-6
Length = 376
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604
PK++ I+GAG+ GL G + R G +VTILE ++N
Sbjct: 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANAN 78
>pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Reductase From
Escherichia Coli
Length = 320
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 524 INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMIN----VPKKLCIIGAG 579
+N T +IIATG+ AR + G+ +E A + +K+ +IG G
Sbjct: 96 LNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGG 154
Query: 580 VIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-QGLNIILNT-----K 633
+E + SEV ++ F E+I K L++K + NIIL+T +
Sbjct: 155 NTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIK--RLMDKVENGNIILHTNRTLEE 209
Query: 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT----NNLNIDKIGLKV 689
+ ++ V + + S N+++ + +F +AIG PNT L ++ +KV
Sbjct: 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLF----VAIGHSPNTAIFEGQLELENGYIKV 265
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVV 715
I + +T+IP ++A GDV+
Sbjct: 266 QSG---IHGNATQTSIPGVFAAGDVM 288
>pdb|1TDE|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 524 INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMIN----VPKKLCIIGAG 579
+N T +IIATG+ AR + G+ +E A + +K+ +IG G
Sbjct: 96 LNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGG 154
Query: 580 VIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-QGLNIILNT-----K 633
+E + SEV ++ F E+I K L++K + NIIL+T +
Sbjct: 155 NTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIK--RLMDKVENGNIILHTNRTLEE 209
Query: 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT----NNLNIDKIGLKV 689
+ ++ V + + S N+++ + +F +AIG PNT L ++ +KV
Sbjct: 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLF----VAIGHSPNTAIFEGQLELENGYIKV 265
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVV 715
I + +T+IP ++A GDV+
Sbjct: 266 QSG---IHGNATQTSIPGVFAAGDVM 288
>pdb|2A87|A Chain A, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
pdb|2A87|B Chain B, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
Length = 335
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 126/334 (37%), Gaps = 69/334 (20%)
Query: 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSH 451
DVIVIG+GP GY A++ A+ E + GG L T+
Sbjct: 16 DVIVIGSGPAGYTAALYAARAQLAPLVF-------EGTSFGGA------------LMTTT 56
Query: 452 SFENVKNSFFEYGINTQNVTLNLQKMLERXXXXXXXXXSGXXXXXXXXXXXXXHGHAIFT 511
EN F GI + +++ R G H
Sbjct: 57 DVENYPG--FRNGITGPELMDEMREQALRF---------GADLRMEDVESVSLH------ 99
Query: 512 GKIQNNFHEIQIINKTKETITAKYIIIATGSKAR--SFPGVKFDENLILSNKGALEMIN- 568
G +++ ++ +T A+ +I+A G+ AR PG ++ L+ + +
Sbjct: 100 GPLKS------VVTADGQTHRARAVILAMGAAARYLQVPG---EQELLGRGVSSCATCDG 150
Query: 569 ---VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625
+ + +IG G +E + R VT++ F + + + +A N
Sbjct: 151 FFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS--KIMLDRA---RNNDK 205
Query: 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEI---ITSIFDKLLIAIGRIPNTNNLNI 682
+ + N + + ++ + + + TN E +T +F +AIG P + +
Sbjct: 206 IRFLTNHTV--VAVDGDTTVTGLRVRDTNTGAETTLPVTGVF----VAIGHEPRS---GL 256
Query: 683 DKIGLKVNENNFIIVND-NCETNIPNIYAIGDVV 715
+ + V+ + +++V T++P ++A GD+V
Sbjct: 257 VREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLV 290
>pdb|1F6M|A Chain A, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|B Chain B, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|E Chain E, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|F Chain F, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 320
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 524 INKTKETITAKYIIIATGSKARSFPGVKFDENL----ILSNKGALEMINVPKKLCIIGAG 579
+N T +IIATG+ AR + G+ +E + ++ +K+ +IG G
Sbjct: 96 LNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSASATCDGFFYRNQKVAVIGGG 154
Query: 580 VIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-QGLNIILNT-----K 633
+E + SEV ++ F E+I K L++K + NIIL+T +
Sbjct: 155 NTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIK--RLMDKVENGNIILHTNRTLEE 209
Query: 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT----NNLNIDKIGLKV 689
+ ++ V + + S N+++ + +F +AIG PNT L ++ +KV
Sbjct: 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLF----VAIGHSPNTAIFEGQLELENGYIKV 265
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVV 715
I + +T+IP ++A GDV+
Sbjct: 266 QSG---IHGNATQTSIPGVFAAGDVM 288
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 573 LCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL-N 631
+ +IG+G IG+E + + G +VT++++ L L+K+ +++
Sbjct: 152 VVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----------YLDKEFTDVLTEE 200
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK--LLIAIGRIPNTNNLNIDKIGLKV 689
+ ++I I + Y K + +D +++A+G PNT L K L++
Sbjct: 201 MEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWL---KGTLEL 257
Query: 690 NENNFIIVNDNCETNIPNIYAIGD 713
+ N I ++ T+ P+++A+GD
Sbjct: 258 HPNGLIKTDEYMRTSEPDVFAVGD 281
>pdb|1TRB|A Chain A, Convergent Evolution Of Similar Function In Two
Structurally Divergent Enzymes
Length = 320
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 524 INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMIN----VPKKLCIIGAG 579
+N T +IIATG+ AR + G+ +E A + +K+ +IG G
Sbjct: 96 LNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGG 154
Query: 580 VIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-QGLNIILNT-----K 633
+E + SEV ++ F E+I K L++K + NIIL+T +
Sbjct: 155 NTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIK--RLMDKVENGNIILHTNRTLEE 209
Query: 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT----NNLNIDKIGLKV 689
+ ++ V + + S N+++ + +F +AIG PNT L ++ +KV
Sbjct: 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLF----VAIGHSPNTAIFEGQLELENGYIKV 265
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVV 715
I + +T+IP ++A GDV+
Sbjct: 266 QSG---IHGNATQTSIPGVFAAGDVM 288
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 573 LCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL-N 631
+ +IG+G IG+E + + G +VT++++ L L+K+ +++
Sbjct: 152 VVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----------YLDKEFTDVLTEE 200
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK--LLIAIGRIPNTNNLNIDKIGLKV 689
+ ++I I + Y K + +D +++A+G PNT L K L++
Sbjct: 201 MEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWL---KGTLEL 257
Query: 690 NENNFIIVNDNCETNIPNIYAIGD 713
+ N I ++ T+ P+++A+GD
Sbjct: 258 HPNGLIKTDEYMRTSEPDVFAVGD 281
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 573 LCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL-N 631
+ +IG+G IG+E + + G +VT++++ L L+K+ +++
Sbjct: 152 VVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----------YLDKEFTDVLTEE 200
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK--LLIAIGRIPNTNNLNIDKIGLKV 689
+ ++I I + Y K + +D +++A+G PNT L K L++
Sbjct: 201 MEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWL---KGTLEL 257
Query: 690 NENNFIIVNDNCETNIPNIYAIGD 713
+ N I ++ T+ P+++A+GD
Sbjct: 258 HPNGLIKTDEYMRTSEPDVFAVGD 281
>pdb|1TDF|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 524 INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMIN----VPKKLCIIGAG 579
+N T +IIATG+ AR + G+ +E A + +K+ +IG G
Sbjct: 96 LNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGG 154
Query: 580 VIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-QGLNIILNT-----K 633
+E + SEV ++ F E+I K L++K + NIIL+T +
Sbjct: 155 NTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIK--RLMDKVENGNIILHTNRTLEE 209
Query: 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT----NNLNIDKIGLKV 689
+ ++ V + + S N+++ + +F +AIG PNT L ++ +KV
Sbjct: 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLF----VAIGHSPNTAIFEGQLELENGYIKV 265
Query: 690 NENNFIIVNDNCETNIPNIYAIGDVV 715
I + +T+IP ++A GDV+
Sbjct: 266 QSG---IHGNATQTSIPGVFAAGDVM 288
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 573 LCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL-N 631
+ +IG+G IG+E + + G +VT++++ L L+K+ +++
Sbjct: 152 VVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----------YLDKEFTDVLTEE 200
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK--LLIAIGRIPNTNNLNIDKIGLKV 689
+ ++I I + Y K + +D +++A+G PNT L K L++
Sbjct: 201 MEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWL---KGTLEL 257
Query: 690 NENNFIIVNDNCETNIPNIYAIGD 713
+ N I ++ T+ P+++A+GD
Sbjct: 258 HPNGLIKTDEYMRTSEPDVFAVGD 281
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 573 LCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL-N 631
+ +IG+G IG+E + + G +VT++++ L L+K+ +++
Sbjct: 152 VVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----------YLDKEFTDVLTEE 200
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK--LLIAIGRIPNTNNLNIDKIGLKV 689
+ ++I I + Y K + +D +++A+G PNT L K L++
Sbjct: 201 MEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWL---KGTLEL 257
Query: 690 NENNFIIVNDNCETNIPNIYAIGD 713
+ N I ++ T+ P+++A+GD
Sbjct: 258 HPNGLIKTDEYMRTSEPDVFAVGD 281
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 573 LCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL-N 631
+ +IG+G IG+E + + G +VT++++ L L+K+ +++
Sbjct: 152 VVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----------YLDKEFTDVLTEE 200
Query: 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK--LLIAIGRIPNTNNLNIDKIGLKV 689
+ ++I I + Y K + +D +++A+G PNT L K L++
Sbjct: 201 MEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWL---KGTLEL 257
Query: 690 NENNFIIVNDNCETNIPNIYAIGD 713
+ N I ++ T+ P+++A+GD
Sbjct: 258 HPNGLIKTDEYMRTSEPDVFAVGD 281
>pdb|1VDC|A Chain A, Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL 630
K L +IG G +E + + GS+V I+ F + +I ++ L+ +++I
Sbjct: 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRAS---KIMQQ--RALSNPKIDVIW 214
Query: 631 NTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FDKLLIAIGRIPNTNNLNIDKIGLKV 689
N+ + + + E ++ K NV T ++ + L AIG P T L+ G+++
Sbjct: 215 NSSVVEAYGDGERDVLG-GLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD---GGVEL 270
Query: 690 NENNFIIVN-DNCETNIPNIYAIGDV 714
+ + +++ +T++P ++A GDV
Sbjct: 271 DSDGYVVTKPGTTQTSVPGVFAAGDV 296
>pdb|3BHF|A Chain A, Crystal Structure Of R49k Mutant Of Monomeric Sarcosine
Oxidase Crystallized In Peg As Precipitant
pdb|3BHF|B Chain B, Crystal Structure Of R49k Mutant Of Monomeric Sarcosine
Oxidase Crystallized In Peg As Precipitant
pdb|3BHK|A Chain A, Crystal Structure Of R49k Mutant Of Monomeric Sarcosine
Oxidase Crystallized In Phosphate As Precipitant
pdb|3BHK|B Chain B, Crystal Structure Of R49k Mutant Of Monomeric Sarcosine
Oxidase Crystallized In Phosphate As Precipitant
Length = 390
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN 428
M+ +FDVIV+GAG G A +LA+ G KT +D + N
Sbjct: 1 MSTHFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTN 42
>pdb|2V3A|A Chain A, Crystal Structure Of Rubredoxin Reductase From Pseudomonas
Aeruginosa.
pdb|2V3B|A Chain A, Crystal Structure Of The Electron Transfer Complex
Rubredoxin - Rubredoxin Reductase From Pseudomonas
Aeruginosa
Length = 384
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 27/193 (13%)
Query: 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHL-LNKQGLNII 629
+++ ++GAG+IG E + G ++ ++ + + A KA L G+
Sbjct: 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFH 205
Query: 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689
L + +K E + + S+ E+I D ++ A+G P T L GL V
Sbjct: 206 LGPVLASLKKAGEGLEAHLSDG------EVIPC--DLVVSAVGLRPRTE-LAF-AAGLAV 255
Query: 690 NENNFIIVNDNCETNIPNIYAIGDV--VRG-------PMLAHKAEEEGIMVAEHISGQKH 740
N I+V+ + T+ NIYA+GD V G P++A +A+ ++G
Sbjct: 256 NRG--IVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARA-----LAQTLAGNPS 308
Query: 741 SINFNALPFVIYT 753
+ + +P + T
Sbjct: 309 QVAYGPMPVTVKT 321
>pdb|1W4E|A Chain A, Peripheral-Subunit Binding Domains From Mesophilic,
Thermophilic, And Hyperthermophilic Bacteria Fold By
Ultrafast, Apparently Two-State Transitions
pdb|1W4F|A Chain A, Peripheral-Subunit From Mesophilic, Thermophilic And
Hyperthermophilic Bacteria Fold By Ultrafast, Apparently
Two-State Transitions
Length = 47
Score = 37.0 bits (84), Expect = 0.041, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 98 NLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136
N I MPS +K + ++I ++ GTGK+GR++KED+
Sbjct: 3 NRRVIAMPSVRKYAREKGVDI-RLVQGTGKNGRVLKEDI 40
>pdb|1W85|I Chain I, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound
To The Peripheral Subunit Binding Domain Of E2
pdb|1W85|J Chain J, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound
To The Peripheral Subunit Binding Domain Of E2
pdb|1W88|I Chain I, The Crystal Structure Of Pyruvate Dehydrogenase E1(D180n,
E183q) Bound To The Peripheral Subunit Binding Domain Of
E2
pdb|1W88|J Chain J, The Crystal Structure Of Pyruvate Dehydrogenase E1(D180n,
E183q) Bound To The Peripheral Subunit Binding Domain Of
E2
Length = 49
Score = 37.0 bits (84), Expect = 0.043, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 98 NLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136
N I MPS +K + ++I ++ GTGK+GR++KED+
Sbjct: 4 NRRVIAMPSVRKYAREKGVDI-RLVQGTGKNGRVLKEDI 41
>pdb|1W3D|A Chain A, Nmr Structure Of The Peripheral-Subunit Binding Domain Of
Bacillus Stearothermophilus E2p
Length = 55
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 98 NLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136
N I MPS +K + ++I ++ GTGK+GR++KED+
Sbjct: 10 NRRVIAMPSVRKYAREKGVDI-RLVQGTGKNGRVLKEDI 47
>pdb|1W4G|A Chain A, Peripheral-Subunit Binding Domains From Mesophilic,
Thermophilic, And Hyperthermophilic Bacteria Fold By
Ultrafast, Apparently Two-State Folding Transitions
Length = 47
Score = 36.6 bits (83), Expect = 0.061, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 98 NLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136
N I MPS +K + ++I ++ GTGK+GR++KED+
Sbjct: 3 NRRVIAMPSVRKWAREKGVDI-RLVQGTGKNGRVLKEDI 40
>pdb|3U1K|A Chain A, Crystal Structure Of Human Pnpase
pdb|3U1K|C Chain C, Crystal Structure Of Human Pnpase
pdb|3U1K|B Chain B, Crystal Structure Of Human Pnpase
pdb|3U1K|D Chain D, Crystal Structure Of Human Pnpase
Length = 630
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 16/146 (10%)
Query: 508 AIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMI 567
A G+I N+ ++ KE +T++ I S FP F + +L N A++ +
Sbjct: 67 AAAAGRIPTNYLRREVGTSDKEILTSRII---DRSIRPLFPAGYFYDTQVLCNLLAVDGV 123
Query: 568 NVPKKLCIIGA------------GVIG-LEIGSIWRRLGSEVTILEMSSNFLNTVDEEIA 614
N P L I GA G +G + IG I T EMSS+ LN V
Sbjct: 124 NEPDVLAINGASVALSLSDIPWNGPVGAVRIGIIDGEYVVNPTRKEMSSSTLNLVVAGAP 183
Query: 615 KKAFHLLNKQGLNIILNTKIHDIKIN 640
K +L NI+ H IK+
Sbjct: 184 KSQIVMLEASAENILQQDFCHAIKVG 209
>pdb|1QJO|A Chain A, Innermost Lipoyl Domain Of The Pyruvate Dehydrogenase
From Escherichia Coli
Length = 80
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITD 64
EV +P + E T + K G+ V ++LI +E DK +E+PAP G++ ++ +
Sbjct: 4 EVNVPDIGGDEVEVTEV--MVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNV 61
Query: 65 GSIVTSNQVIALIDTD 80
G V + +I + + +
Sbjct: 62 GDKVKTGSLIMIFEVE 77
>pdb|2PDE|A Chain A, The High Resolution Structure Of The Peripheral
Subunit-Binding Domain Of Dihydrolipoamide
Acetyltransferase From The Pyruvate Dehydrogenase
Multienzyme Complex Of Bacillus Stearothermophilus
Length = 43
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 102 IVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136
I MPS +K + ++I ++ GTGK+GR++KED+
Sbjct: 2 IAMPSVRKYAREKGVDI-RLVQGTGKNGRVLKEDI 35
>pdb|2K7V|A Chain A, Deletions In A Surface Loop Divert The Folding Of A
Protein Domain Into A Metastable Dimeric Form
pdb|2K7V|B Chain B, Deletions In A Surface Loop Divert The Folding Of A
Protein Domain Into A Metastable Dimeric Form
Length = 85
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITD 64
EV +P + E ++E + K G+ V ++LI +E DK +E+PAP G++ ++ +
Sbjct: 4 EVNVPDIVE-VTEVMV-----KVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNV 57
Query: 65 GSIVTSNQVIALIDTD 80
G V + +I + + +
Sbjct: 58 GDKVKTGSLIMIFEVE 73
>pdb|1EBD|C Chain C, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 41
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 102 IVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136
I MPS +K + ++I ++ GTGK+GR++KED+
Sbjct: 1 IAMPSVRKYAREKGVDI-RLVQGTGKNGRVLKEDI 34
>pdb|2PDD|A Chain A, The High Resolution Structure Of The Peripheral Subunit-
Binding Domain Of Dihydrolipoamide Acetyltransferase
From The Pyruvate Dehydrogenase Multienzyme Complex Of
Bacillus Stearothermophilus
Length = 43
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 102 IVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136
I MPS +K + ++I ++ GTGK+GR++KED+
Sbjct: 2 IAMPSVRKYAREKGVDI-RLVQGTGKNGRVLKEDI 35
>pdb|3M0O|A Chain A, Crystal Structure Of The Lys265met Mutant Of Monomeric
Sarcosine Oxidase
pdb|3M0O|B Chain B, Crystal Structure Of The Lys265met Mutant Of Monomeric
Sarcosine Oxidase
Length = 389
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN 428
+FDVIV+GAG G A +LA+ G KT +D + N
Sbjct: 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTN 41
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 667 LLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDV-----------V 715
+++A G PN ++G+++ E I N+ +T++ N+YA GDV V
Sbjct: 236 VILATGIKPNIELAK--QLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRV 293
Query: 716 RGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISY 774
P LA + G + +I+G++ H + EI G TE K Y
Sbjct: 294 WVP-LAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEG--Y 350
Query: 775 NVGIFPFLANSRARIL-GETSGMVKILSDMKSDEILGIHIIG 815
+V A++R G +K + D +++ +LG+ ++G
Sbjct: 351 DVRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVG 392
>pdb|1EL5|A Chain A, Complex Of Monomeric Sarcosine Oxidase With The Inhibitor
Dimethylglycine
pdb|1EL5|B Chain B, Complex Of Monomeric Sarcosine Oxidase With The Inhibitor
Dimethylglycine
pdb|1EL7|A Chain A, Complex Of Monomeric Sarcosine Oxidase With The Inhibitor
[methytelluro]acetate
pdb|1EL7|B Chain B, Complex Of Monomeric Sarcosine Oxidase With The Inhibitor
[methytelluro]acetate
pdb|1EL8|A Chain A, Complex Of Monomeric Sarcosine Oxidase With The Inhibitor
[methylseleno]cetate
pdb|1EL8|B Chain B, Complex Of Monomeric Sarcosine Oxidase With The Inhibitor
[methylseleno]cetate
pdb|1L9E|A Chain A, Role Of Histidine 269 In Catalysis By Monomeric Sarcosine
Oxidase
pdb|1L9E|B Chain B, Role Of Histidine 269 In Catalysis By Monomeric Sarcosine
Oxidase
pdb|2A89|A Chain A, Monomeric Sarcosine Oxidase: Structure Of A Covalently
Flavinylated Amine Oxidizing Enzyme
pdb|2A89|B Chain B, Monomeric Sarcosine Oxidase: Structure Of A Covalently
Flavinylated Amine Oxidizing Enzyme
pdb|2GB0|A Chain A, Monomeric Sarcosine Oxidase: Structure Of A Covalently
Flavinylated Amine Oxidizing Enzyme
pdb|2GB0|B Chain B, Monomeric Sarcosine Oxidase: Structure Of A Covalently
Flavinylated Amine Oxidizing Enzyme
pdb|2GF3|A Chain A, Structure Of The Complex Of Monomeric Sarcosine With Its
Substrate Analogue Inhibitor 2-Furoic Acid At 1.3 A
Resolution.
pdb|2GF3|B Chain B, Structure Of The Complex Of Monomeric Sarcosine With Its
Substrate Analogue Inhibitor 2-Furoic Acid At 1.3 A
Resolution.
pdb|3QSE|A Chain A, Crystal Structure For The Complex Of Substrate-Reduced
Msox With Sarcosine
pdb|3QSE|B Chain B, Crystal Structure For The Complex Of Substrate-Reduced
Msox With Sarcosine
pdb|3QSM|A Chain A, Crystal Structure For The Msox.Chloride Binary Complex
pdb|3QSM|B Chain B, Crystal Structure For The Msox.Chloride Binary Complex
pdb|3QSS|A Chain A, Crystal Structure For The Msox.Chloride.Mta Ternary
Complex
pdb|3QSS|B Chain B, Crystal Structure For The Msox.Chloride.Mta Ternary
Complex
Length = 389
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN 428
+FDVIV+GAG G A +LA+ G KT +D + N
Sbjct: 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTN 41
>pdb|1L9C|A Chain A, Role Of Histidine 269 In Catalysis By Monomeric Sarcosine
Oxidase
pdb|1L9C|B Chain B, Role Of Histidine 269 In Catalysis By Monomeric Sarcosine
Oxidase
pdb|1L9D|A Chain A, Role Of Histidine 269 In Catalysis By Monomeric Sarcosine
Oxidase
pdb|1L9D|B Chain B, Role Of Histidine 269 In Catalysis By Monomeric Sarcosine
Oxidase
Length = 389
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN 428
+FDVIV+GAG G A +LA+ G KT +D + N
Sbjct: 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTN 41
>pdb|3M12|A Chain A, Crystal Structure Of The Lys265arg Phosphate-Crytsallized
Mu Monomeric Sarcosine Oxidase
pdb|3M12|B Chain B, Crystal Structure Of The Lys265arg Phosphate-Crytsallized
Mu Monomeric Sarcosine Oxidase
pdb|3M13|A Chain A, Crystal Structure Of The Lys265arg Peg-crystallized Mutant
Of Monomeric Sarcosine Oxidase
pdb|3M13|B Chain B, Crystal Structure Of The Lys265arg Peg-crystallized Mutant
Of Monomeric Sarcosine Oxidase
pdb|3M13|C Chain C, Crystal Structure Of The Lys265arg Peg-crystallized Mutant
Of Monomeric Sarcosine Oxidase
pdb|3M13|D Chain D, Crystal Structure Of The Lys265arg Peg-crystallized Mutant
Of Monomeric Sarcosine Oxidase
Length = 389
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN 428
+FDVIV+GAG G A +LA+ G KT +D + N
Sbjct: 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTN 41
>pdb|4E0V|A Chain A, Structure Of L-Amino Acid Oxidase From The B. Jararacussu
Venom
pdb|4E0V|B Chain B, Structure Of L-Amino Acid Oxidase From The B. Jararacussu
Venom
Length = 497
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS 602
F ++E L ++ G L + PK++ I+GAG+ GL + G +VT+LE S
Sbjct: 24 FRETDYEEFLEIAKNG-LSTTSNPKRVVIVGAGMSGLSAAYVLANAGHQVTVLEAS 78
>pdb|1F8R|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|B Chain B, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|C Chain C, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|D Chain D, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8S|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|B Chain B, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|C Chain C, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|D Chain D, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|E Chain E, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|F Chain F, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|G Chain G, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|H Chain H, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|2IID|A Chain A, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|B Chain B, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|C Chain C, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|D Chain D, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
Length = 498
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 544 ARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS 602
A F ++E L ++ G L+ + PK + I+GAG+ GL + G +VT+LE S
Sbjct: 8 AECFQENDYEEFLEIARNG-LKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS 65
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 513 KIQNNFHEIQIINKT--KET--ITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMIN 568
KIQ N ++ ++ +T KET +TA Y+I+ T S+A +KF+ L+ AL ++
Sbjct: 263 KIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRL--IKFNPPLLPKKAHALRSVH 320
>pdb|3KLJ|A Chain A, Crystal Structure Of Nadh:rubredoxin Oxidoreductase From
Clostridium Acetobutylicum
Length = 385
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 667 LLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVV----RGPMLAH 722
++ A+G PN + + +I K I+VND+ ET+I +IYA GDV + P L +
Sbjct: 223 VITAVGVKPNLDFIKDTEIASKRG----ILVNDHMETSIKDIYACGDVAEFYGKNPGLIN 278
Query: 723 KAEEEGIMVAEHISGQKHS 741
A ++G + + G+ S
Sbjct: 279 IANKQGEVAGLNACGEDAS 297
>pdb|2BTG|A Chain A, Peripheral-Subunit Binding Domains From Mesophilic,
Thermophilic, And Hyperthermophilic Bacteria Fold By
Ultrafast, Apparently Two-State Transitions
pdb|2BTH|A Chain A, Peripheral-Subunit Binding Domains From Mesophilic,
Thermophilic, And Hyperthermophilic Bacteria Fold By
Ultrafast, Apparently Two-State Transitions
Length = 47
Score = 34.3 bits (77), Expect = 0.27, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLS 141
N + P+ +++L+++NL+ S I GTG GR+ +EDV K L+
Sbjct: 5 NDALSPAIRRLLAEHNLDASAIK-GTGVGGRLTREDVEKWLA 45
>pdb|3D1C|A Chain A, Crystal Structure Of Flavin-Containing Putative
Monooxygenase (Np_373108.1) From Staphylococcus Aureus
Mu50 At 2.40 A Resolution
Length = 369
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 26/204 (12%)
Query: 524 INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGL 583
I T ET A YI +ATG +FP F + S + N + +IG G
Sbjct: 123 IATTTETYHADYIFVATGD--YNFPKKPFKYGIHYSEIEDFDNFN-KGQYVVIGGNESGF 179
Query: 584 EIGSIWRRLGSEVTILEMSSNFLNTVDEE-------IAKKAFHLLNKQGLNIILNTK--I 634
+ + GS++ L S+ LN D + ++ + KQG I N +
Sbjct: 180 DAAYQLAKNGSDIA-LYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEXNVHYTV 238
Query: 635 HDIKINKENVLINY-SNKSTNVKTE-IITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNEN 692
DI N I++ S +S + E I+ + FD T N + ++ + N++
Sbjct: 239 KDIDFNNGQYHISFDSGQSVHTPHEPILATGFDA----------TKNPIVQQLFVTTNQD 288
Query: 693 NFIIVNDNCETNIPNIYAIGDVVR 716
+ +D T PNI+ IG V
Sbjct: 289 IKLTTHDE-STRYPNIFXIGATVE 311
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 562 GALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-NTVDEEIAKKAFHL 620
A+ ++ + + +IGAG IG E + V + E N L D+E +
Sbjct: 139 AAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHVFESLENLLPKYFDKEXVAEVQKS 198
Query: 621 LNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNL 680
L KQ + + I+ +++ S + + D + A+ P L
Sbjct: 199 LEKQAVIFHFEETVLGIEETANGIVLETSEQEISC---------DSGIFALNLHPQLAYL 249
Query: 681 NIDKIGLKVNENNFIIVNDNCETNIPNIYAIGD---VVRGPM-------LAHKAEEEGIM 730
DK ++ N + I V+ +T++PN++AIGD V P+ L + A G++
Sbjct: 250 --DK-KIQRNLDQTIAVDAYLQTSVPNVFAIGDCISVXNEPVAETFYAPLVNNAVRTGLV 306
Query: 731 VAEHISGQKH 740
VA ++ + H
Sbjct: 307 VANNLEEKTH 316
>pdb|1ZOV|A Chain A, Crystal Structure Of Monomeric Sarcosine Oxidase From
Bacillus Sp. Ns- 129
pdb|1ZOV|B Chain B, Crystal Structure Of Monomeric Sarcosine Oxidase From
Bacillus Sp. Ns- 129
Length = 386
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN 428
+FDVIV+GAG G A LA+ G KT +D + N
Sbjct: 3 HFDVIVVGAGSMGMAAGYYLAKQGVKTLLVDSFDPPHTN 41
>pdb|2D5D|A Chain A, Structure Of Biotin Carboxyl Carrier Protein (74val
Start) From Pyrococcus Horikoshi Ot3 Ligand Free Form
Ii
pdb|2D5D|B Chain B, Structure Of Biotin Carboxyl Carrier Protein (74val
Start) From Pyrococcus Horikoshi Ot3 Ligand Free Form
Ii
pdb|2EVB|A Chain A, Structure Of Biotin Carboxyl Carrier Protein (74val
Start) From Pyrococcus Horikoshi Ot3 Ligand Free Form I
pdb|2EJF|C Chain C, Crystal Structure Of The Biotin Protein Ligase
(Mutations R48a And K111a) And Biotin Carboxyl Carrier
Protein Complex From Pyrococcus Horikoshii Ot3
pdb|2EJF|D Chain D, Crystal Structure Of The Biotin Protein Ligase
(Mutations R48a And K111a) And Biotin Carboxyl Carrier
Protein Complex From Pyrococcus Horikoshii Ot3
pdb|2EJG|C Chain C, Crystal Structure Of The Biotin Protein Ligase (Mutation
R48a) And Biotin Carboxyl Carrier Protein Complex From
Pyrococcus Horikoshii Ot3
pdb|2EJG|D Chain D, Crystal Structure Of The Biotin Protein Ligase (Mutation
R48a) And Biotin Carboxyl Carrier Protein Complex From
Pyrococcus Horikoshii Ot3
Length = 74
Score = 33.9 bits (76), Expect = 0.36, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 28 GELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQ 72
G+ V + L+ +E K+ E+P+P+DG++ +I++ +G V + Q
Sbjct: 24 GDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQ 68
>pdb|2EQ7|C Chain C, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
Length = 40
Score = 33.9 bits (76), Expect = 0.36, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 102 IVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140
+ MP+A++++ + + +++ GTG GRI+KEDV++ L
Sbjct: 1 LAMPAAERLMQEKGVSPAEVQ-GTGLGGRILKEDVMRHL 38
>pdb|1W4H|A Chain A, Peripheral-Subunit From Mesophilic, Thermophilic And
Hyperthermophilic Bacteria Fold By Ultrafast, Apparently
Two-State Transitions
Length = 47
Score = 33.9 bits (76), Expect = 0.44, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLS 141
N + P+ +++L+++NL+ S I GTG GR+ +EDV K L+
Sbjct: 5 NDALSPAIRRLLAEHNLDASAIK-GTGVGGRLTREDVEKHLA 45
>pdb|2WHD|A Chain A, Barley Nadph-Dependent Thioredoxin Reductase 2
pdb|2WHD|B Chain B, Barley Nadph-Dependent Thioredoxin Reductase 2
Length = 351
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 524 INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKG--ALEMIN--VP----KKLCI 575
+ T+ A +++ATG+ AR + F + N+G A + + P K + +
Sbjct: 126 VTSDSTTVLADTVVVATGAVARR---LYFSGSDTYWNRGISACAVCDGAAPIFRNKPIAV 182
Query: 576 IGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIH 635
IG G +E G+ + GS+V I+ NT +A L N + + ++ ++++
Sbjct: 183 IGGGDSAMEEGNFLTKYGSQVYIIHRR----NTFRASKIMQARALSNPK-IQVVWDSEVV 237
Query: 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695
+ + V E+ L AIG P T LN L+++ + ++
Sbjct: 238 EAYGGAGGGPLAGVKVKNLVTGEVSDLQVSGLFFAIGHEPATKFLNGQ---LELHADGYV 294
Query: 696 IVN-DNCETNIPNIYAIGDV 714
+ T++ ++A GDV
Sbjct: 295 ATKPGSTHTSVEGVFAAGDV 314
>pdb|1BAL|A Chain A, Three-Dimensional Solution Structure Of The E3-Binding
Domain Of The Dihydrolipoamide Succinyltransferase Core
From The 2-Oxoglutarate Dehydrogenase Multienzyme
Complex Of (Escherichia Coli)
pdb|1BBL|A Chain A, Three-Dimensional Solution Structure Of The E3-Binding
Domain Of The Dihydrolipoamide Succinyltransferase Core
From The 2-Oxoglutarate Dehydrogenase Multienzyme
Complex Of Escherichia Coli
Length = 51
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLS 141
N + P+ +++L+++NL+ S I GTG GR+ +EDV K L+
Sbjct: 9 NDALSPAIRRLLAEHNLDASAIK-GTGVGGRLTREDVEKHLA 49
>pdb|1KDG|A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
pdb|1KDG|B Chain B, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
Length = 546
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 391 FDVIVIGAGPGGYVASIRLAQLGFK 415
+D I++GAGPGG +A+ RL++ G K
Sbjct: 8 YDYIIVGAGPGGIIAADRLSEAGKK 32
>pdb|1REO|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys Pallas
pdb|1TDK|A Chain A, L-amino Acid Oxidase From Agkistrodon Halys In Complex
With Suicide Substrate L-vinylglycine
pdb|1TDN|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys In Complex
With L-Leucine
pdb|1TDO|A Chain A, L-Amino Acid Oxidae From Agkistrodon Halys In Complex With
L- Phenylalanine
Length = 486
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS 602
F ++E L ++ G L+ + PK + ++GAG+ GL + G +VT+LE S
Sbjct: 11 FRETDYEEFLEIARNG-LKATSNPKHVVVVGAGMSGLSAAYVLSGAGHQVTVLEAS 65
>pdb|4DSG|A Chain A, Crystal Structure Of Oxidized Udp-Galactopyranose Mutase
pdb|4DSG|B Chain B, Crystal Structure Of Oxidized Udp-Galactopyranose Mutase
pdb|4DSH|A Chain A, Crystal Structure Of Reduced Udp-Galactopyranose Mutase
pdb|4DSH|B Chain B, Crystal Structure Of Reduced Udp-Galactopyranose Mutase
Length = 484
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 393 VIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424
+++IGAGP G A++RL +LG+K + E D
Sbjct: 12 IVIIGAGPTGLGAAVRLTELGYKNWHLYECND 43
>pdb|1NAA|A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
pdb|1NAA|B Chain B, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
Length = 541
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 391 FDVIVIGAGPGGYVASIRLAQLGFK 415
+D I++GAGPGG +A+ RL++ G K
Sbjct: 3 YDYIIVGAGPGGIIAADRLSEAGKK 27
>pdb|2CVJ|A Chain A, Crystal Structure Of Thioredoxin Reductase-Related Protein
Ttha0370 From Thermus Thermophilus Hb8
pdb|2YWL|A Chain A, Crystal Structure Of Thioredoxin Reductase-Related Protein
Ttha0370 From Thermus Thermophilus Hb8
pdb|2YWL|B Chain B, Crystal Structure Of Thioredoxin Reductase-Related Protein
Ttha0370 From Thermus Thermophilus Hb8
Length = 180
Score = 33.5 bits (75), Expect = 0.55, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 391 FDVIVIGAGPGGYVASIRLAQLGFKTACID 420
+DVIV+G GP G A++ LA+ G K +D
Sbjct: 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLD 31
>pdb|2CYU|A Chain A, Nmr Structure Of A Downhill Folding Protein
Length = 40
Score = 33.1 bits (74), Expect = 0.61, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 105 PSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLS 141
P+ +++L+++NL+ S I GTG GR+ +EDV K L+
Sbjct: 4 PAIRRLLAEHNLDASAIK-GTGVGGRLTREDVEKHLA 39
>pdb|3KVE|A Chain A, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
pdb|3KVE|B Chain B, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
pdb|3KVE|C Chain C, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
pdb|3KVE|D Chain D, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In The
Dynamic Active Site
Length = 486
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS 602
F ++E L ++ G L+ + PK + ++GAG+ GL + G +VT+LE S
Sbjct: 11 FRETDYEEFLEIARNG-LKKTSNPKHVVVVGAGMSGLSAAYVLAGAGHKVTVLEAS 65
>pdb|2WXC|A Chain A, The Folding Mechanism Of Bbl: Plasticity Of Transition-
State Structure Observed Within An Ultrafast Folding
Protein Family
Length = 47
Score = 32.7 bits (73), Expect = 1.0, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLS 141
N + P+ +++L++ NL+ S I GTG GR+ +EDV K L+
Sbjct: 5 NDALSPAIRRLLAEWNLDASAIK-GTGVGGRLTREDVEKHLA 45
>pdb|3I3L|A Chain A, Crystal Structure Of Cmls, A Flavin-Dependent Halogenase
Length = 591
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627
K+ IIG G G G +LG +VTI E S+ V E + +LN+ GL
Sbjct: 25 KVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQ 80
>pdb|3NIX|A Chain A, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|B Chain B, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|C Chain C, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|D Chain D, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|E Chain E, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|F Chain F, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|G Chain G, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|H Chain H, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43
Length = 421
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423
DV+VIGAGP G VA+ + + GFK +++ K
Sbjct: 7 DVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38
>pdb|2GMH|A Chain A, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase In Complexed With Ubiquinone
pdb|2GMH|B Chain B, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase In Complexed With Ubiquinone
pdb|2GMJ|A Chain A, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase
pdb|2GMJ|B Chain B, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase
Length = 584
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 392 DVIVIGAGPGGYVASIRLAQL 412
DV+++GAGP G A+ RL QL
Sbjct: 37 DVVIVGAGPAGLSAATRLKQL 57
>pdb|2VDC|G Chain G, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|H Chain H, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|I Chain I, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|J Chain J, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|K Chain K, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|L Chain L, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications
Length = 456
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 665 DKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE-TNIPNIYAIGDVVRGPMLAHK 723
D ++ A+G P D+ LKV ++V+ + TN+ ++A GD+VRG L
Sbjct: 368 DLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVW 427
Query: 724 AEEEGIMVAEHI 735
A +G AE I
Sbjct: 428 AIRDGRDAAEGI 439
>pdb|2J66|A Chain A, Structural Characterisation Of Btrk Decarboxylase From
Butirosin Biosynthesis
Length = 428
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 249 SVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPE 308
+VD IY +Y + I+ G VP + + I I + +++++ +A+D + P+
Sbjct: 205 TVDLGRNIYERYGIVCECINLGGGFGVPYFSHEKALDIGKITRTVSDYVQEARDTR-FPQ 263
Query: 309 EMSGGTFTISNG 320
TF I +G
Sbjct: 264 T----TFIIESG 271
>pdb|3RHA|A Chain A, The Crystal Structure Of Oxidoreductase From Arthrobacter
Aurescens
pdb|3RHA|B Chain B, The Crystal Structure Of Oxidoreductase From Arthrobacter
Aurescens
Length = 482
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 386 IMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
+ N + DV+++GAGP G A+ L + G A ++
Sbjct: 3 MQNLDRDVVIVGAGPSGLTAARELKKAGLSVAVLE 37
>pdb|3K4N|A Chain A, Pyranose 2-Oxidase F454aS455AY456A MUTANT
pdb|3K4N|B Chain B, Pyranose 2-Oxidase F454aS455AY456A MUTANT
Length = 623
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|1TT0|A Chain A, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|B Chain B, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|C Chain C, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|D Chain D, Crystal Structure Of Pyranose 2-Oxidase
pdb|2IGK|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|3K4M|A Chain A, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|B Chain B, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|C Chain C, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|D Chain D, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|E Chain E, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|F Chain F, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|G Chain G, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|H Chain H, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|2F5V|A Chain A, Reaction Geometry And Thermostability Mutant Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp
Length = 595
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 15 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 48
>pdb|3LSH|A Chain A, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|B Chain B, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|C Chain C, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|D Chain D, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSI|A Chain A, Pyranose 2-Oxidase T169a, Tetragonal
pdb|3LSI|B Chain B, Pyranose 2-Oxidase T169a, Tetragonal
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|3K4K|A Chain A, Pyranose 2-Oxidase F454n Mutant
pdb|3K4L|A Chain A, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
pdb|3K4L|B Chain B, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|3K4J|A Chain A, Pyranose 2-Oxidase H450q Mutant
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|2IGM|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|1DCZ|A Chain A, Biotin Carboxyl Carrier Domain Of Transcarboxylase (Tc
1.3s)
pdb|1DD2|A Chain A, Biotin Carboxyl Carrier Domain Of Transcarboxylase (Tc
1.3s)
Length = 77
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 48 ELPAPQDGIINKIIITDGSIVTSNQVIALIDTDISKLSSKTEIKNKKDIK 97
E+PAP G ++KI++ +G V + Q + +++ + +TEI D K
Sbjct: 10 EIPAPLAGTVSKILVKEGDTVKAGQTVLVLEA----MKMETEINAPTDGK 55
Score = 29.6 bits (65), Expect = 8.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 26 KEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQ 72
KEG+ V + ++ +E K+ E+ AP DG + K+++ + V Q
Sbjct: 25 KEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQ 71
>pdb|3K4B|A Chain A, Pyranose 2-Oxidase T169s Mutant
pdb|3LSK|A Chain A, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|B Chain B, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|C Chain C, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|D Chain D, Pyranose 2-Oxidase T169s Acetate Complex
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|3BG6|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|B Chain B, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|C Chain C, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|D Chain D, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|E Chain E, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|F Chain F, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|G Chain G, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|H Chain H, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|2IGN|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGO|A Chain A, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|B Chain B, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|D Chain D, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|C Chain C, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|E Chain E, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|F Chain F, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|H Chain H, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|G Chain G, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|3LSM|A Chain A, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3LSM|B Chain B, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3PL8|A Chain A, Pyranose 2-Oxidase H167a Complex With
3-Deoxy-3-Fluoro-Beta-D-Glucose
Length = 623
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|2F6C|A Chain A, Reaction Geometry And Thermostability Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp.,
Thermostability Mutant E542k
Length = 595
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 15 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 48
>pdb|3BLY|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542kL537W
Length = 623
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|3K4C|A Chain A, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|B Chain B, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|C Chain C, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|D Chain D, Pyranose 2-Oxidase H167aT169G MUTANT
Length = 623
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|2ZBW|A Chain A, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
pdb|2ZBW|B Chain B, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
Length = 335
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 665 DKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP 718
D +LI G I L + L E N I V+ T+IP +YA GD+V P
Sbjct: 242 DAVLILAGYITKLGPLANWGLAL---EKNKIKVDTTXATSIPGVYACGDIVTYP 292
>pdb|3LML|A Chain A, Crystal Structure Of The Sheath Tail Protein Lin1278 From
Listeria Innocua, Northeast Structural Genomics
Consortium Target Lkr115
pdb|3LML|B Chain B, Crystal Structure Of The Sheath Tail Protein Lin1278 From
Listeria Innocua, Northeast Structural Genomics
Consortium Target Lkr115
pdb|3LML|C Chain C, Crystal Structure Of The Sheath Tail Protein Lin1278 From
Listeria Innocua, Northeast Structural Genomics
Consortium Target Lkr115
pdb|3LML|D Chain D, Crystal Structure Of The Sheath Tail Protein Lin1278 From
Listeria Innocua, Northeast Structural Genomics
Consortium Target Lkr115
pdb|3LML|E Chain E, Crystal Structure Of The Sheath Tail Protein Lin1278 From
Listeria Innocua, Northeast Structural Genomics
Consortium Target Lkr115
pdb|3LML|F Chain F, Crystal Structure Of The Sheath Tail Protein Lin1278 From
Listeria Innocua, Northeast Structural Genomics
Consortium Target Lkr115
Length = 460
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 33 RNENLIDIETDKVILELPAPQDGIIN---KIIITDGSIVTSNQVIALI---DTDISKLSS 86
R+E + I+ V+ PA +GIIN + + DG+I+ +QV+A + D S L S
Sbjct: 231 RDEQGVKIK--GVVANXPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASXLKS 288
Query: 87 KTEIKNKKDIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNI 146
T +K I + A++ L + ++ D R V + L+S+
Sbjct: 289 NTFVKYDGAIDATPRLANDEAEEALQNGEFVLT-------FDARDKAVYVEQDLNSLTTF 341
Query: 147 NEEKQEKYK 155
++EK K++
Sbjct: 342 SKEKSSKFR 350
>pdb|3BG7|A Chain A, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|B Chain B, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|C Chain C, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|D Chain D, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|E Chain E, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|F Chain F, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|G Chain G, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|H Chain H, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
Length = 623
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|2VHW|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|C Chain C, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|D Chain D, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|E Chain E, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|F Chain F, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHX|A Chain A, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|B Chain B, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|C Chain C, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|D Chain D, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|E Chain E, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|F Chain F, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHY|A Chain A, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHY|B Chain B, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHZ|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
pdb|2VHZ|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
Length = 377
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKK 616
P + +IGAG G I +G+ VT+L+++ + L +D E +
Sbjct: 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR 214
>pdb|2VOE|A Chain A, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|B Chain B, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|C Chain C, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|D Chain D, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|E Chain E, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|F Chain F, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOJ|A Chain A, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|C Chain C, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|E Chain E, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
Length = 371
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKK 616
P + +IGAG G I +G+ VT+L+++ + L +D E +
Sbjct: 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR 214
>pdb|3FDY|A Chain A, Pyranose 2-Oxidase Thermostable Triple Mutant,
T169gE542KV546C
Length = 623
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
M+ +DV+++G+GP G + L G+K A D
Sbjct: 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFD 76
>pdb|2VHV|A Chain A, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh.
pdb|2VHV|B Chain B, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh
Length = 377
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKK 616
P + +IGAG G I +G+ VT+L+++ + L +D E +
Sbjct: 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR 214
>pdb|1COY|A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A
Steroid Substrate. Implications For Fad Dependent
Alcohol Oxidases
pdb|3COX|A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A
Steroid Substrate. Implications For Fad Dependent
Alcohol Oxidases
Length = 507
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 393 VIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCI---PSKALLQT 449
+VIG+G GG VA++RL Q G T ++ ++ G+ + C P K +
Sbjct: 14 ALVIGSGYGGAVAALRLTQAGIPTQIVEM----GRSWDTPGSDGKIFCGMLNPDKRSMWL 69
Query: 450 SHSFENVKNSFFEYGIN 466
+ + ++F +GIN
Sbjct: 70 ADKTDQPVSNFMGFGIN 86
>pdb|1T5J|A Chain A, Crystal Structure Of Ribosylglycohydrolase Mj1187 From
Methanococcus Jannaschii
Length = 313
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 539 ATGSKARSFP-GVKFDENLILSNKGALEMINVPK-----KLCIIGAGVIGLEIGSIWRRL 592
+ G+ R +P G+ F NL K E+I K K I GA I + S +
Sbjct: 123 SCGAAMRIYPLGIVFHNNL---KKLKEEVIKASKITHNNKTAIAGALAIAFFVSSALKDR 179
Query: 593 GSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILN 631
+ ++L+ N++ +DEE AKK + N L+ I +
Sbjct: 180 -KDFSLLDECYNYIKDIDEEFAKKLLEIKNFNNLDYIYD 217
>pdb|1O78|A Chain A, Biotin Carboxyl Carrier Domain Of Transcarboxylase
(1.3s) [10-48] Deletion Mutant
Length = 84
Score = 30.0 bits (66), Expect = 5.5, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 48 ELPAPQDGIINKIIITDGSIVTSNQVIALIDTDISKLSSKTEIKNKKDIK 97
E+PAP G ++KI++ +G V + Q + +++ + +TEI D K
Sbjct: 17 EIPAPLAGTVSKILVKEGDTVKAGQTVLVLEA----MKMETEINAPTDGK 62
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 334
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 670 AIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIY-----AIGDVVRGPMLAHKA 724
A+G++ N + + +V N +V+ C P Y A+ +GPM A
Sbjct: 214 AVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPMAGILA 273
Query: 725 EEEGIMVAEHISGQKHSINFNA 746
E +V+ +G HS F+A
Sbjct: 274 YTEDQVVSTDFNGDSHSSIFDA 295
>pdb|3NLC|A Chain A, Crystal Structure Of The Vp0956 Protein From Vibrio
Parahaemolyticus. Northeast Structural Genomics
Consortium Target Vpr147
Length = 549
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 394 IVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN 428
IVIG GP G A + LAQ GF ++ K+ E
Sbjct: 111 IVIGFGPCGLFAGLVLAQXGFNPIIVERGKEVRER 145
>pdb|2EEZ|A Chain A, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|C Chain C, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|D Chain D, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|E Chain E, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|F Chain F, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|G Chain G, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
Length = 369
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHL 620
P + I+G G +G I +G++VTIL+++ L +D+ + L
Sbjct: 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITL 216
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 21/109 (19%)
Query: 572 KLCIIGAGV-IGLEIGSIWRRL----GSEVTILEMSSNFLNTVDE------------EIA 614
K+C++G GV GL G++W GS V I + + L + +I
Sbjct: 170 KVCLLGCGVPTGL--GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDID 227
Query: 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663
K + K G+N +N K HD I + V+++ ++ + E I ++
Sbjct: 228 SKKYETAKKFGVNEFVNPKDHDKPI--QEVIVDLTDGGVDYSFECIGNV 274
>pdb|3P6L|A Chain A, Crystal Structure Of A Sugar Phosphate IsomeraseEPIMERASE
(BDI_1903) From Parabacteroides Distasonis Atcc 8503 At
1.85 A Resolution
Length = 262
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 522 QIINKTKETITAKYIIIATGSKARSFPGVK-FDENLILSNKGALEMINVPKKLCIIGAGV 580
+ ++KT+E + KYI I G K G K FD NL + ++ + K + I+G GV
Sbjct: 26 EALDKTQE-LGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGV 84
Query: 581 IGLEIGSIWRR 591
E S W +
Sbjct: 85 YVAEKSSDWEK 95
>pdb|3HDQ|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDQ|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase (Oxidized
Form) In Complex With Substrate
pdb|3HDY|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HE3|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3HE3|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Udp
pdb|3MJ4|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase In Complex
With Phosphonate Analog Of Udp-Galactopyranose
Length = 397
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACID 420
+K FD +++GAG G V + RLA G + +D
Sbjct: 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVD 59
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,694,925
Number of Sequences: 62578
Number of extensions: 917268
Number of successful extensions: 3985
Number of sequences better than 100.0: 262
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 3340
Number of HSP's gapped (non-prelim): 377
length of query: 866
length of database: 14,973,337
effective HSP length: 107
effective length of query: 759
effective length of database: 8,277,491
effective search space: 6282615669
effective search space used: 6282615669
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)