Query psy9583
Match_columns 866
No_of_seqs 595 out of 5162
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 23:22:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9583.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9583hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05704 dihydrolipoamide succ 100.0 4.7E-83 1E-87 700.9 40.5 379 1-384 1-392 (407)
2 TIGR01347 sucB 2-oxoglutarate 100.0 1.5E-82 3.2E-87 695.0 40.6 375 4-384 1-388 (403)
3 COG1249 Lpd Pyruvate/2-oxoglut 100.0 5.1E-80 1.1E-84 683.8 55.5 452 388-856 2-454 (454)
4 PLN02744 dihydrolipoyllysine-r 100.0 3.1E-80 6.6E-85 688.3 38.1 372 4-384 113-526 (539)
5 TIGR02927 SucB_Actino 2-oxoglu 100.0 6.5E-80 1.4E-84 708.0 40.5 381 4-385 136-575 (590)
6 KOG1335|consensus 100.0 2.7E-77 5.9E-82 607.8 45.7 463 389-865 38-505 (506)
7 TIGR01349 PDHac_trf_mito pyruv 100.0 1.4E-78 3.1E-83 672.3 39.3 377 5-384 1-422 (435)
8 PLN02528 2-oxoisovalerate dehy 100.0 5.2E-78 1.1E-82 664.1 39.8 376 6-384 1-400 (416)
9 COG0508 AceF Pyruvate/2-oxoglu 100.0 1.5E-78 3.3E-83 664.7 35.3 375 2-384 1-390 (404)
10 TIGR01348 PDHac_trf_long pyruv 100.0 2.1E-77 4.5E-82 682.5 40.3 379 3-384 116-533 (546)
11 PRK06467 dihydrolipoamide dehy 100.0 2.1E-72 4.5E-77 643.5 57.8 462 387-865 1-464 (471)
12 PLN02226 2-oxoglutarate dehydr 100.0 2E-74 4.2E-79 627.9 38.4 357 4-384 92-448 (463)
13 PTZ00144 dihydrolipoamide succ 100.0 5.3E-74 1.1E-78 622.1 38.0 356 3-384 44-403 (418)
14 KOG0557|consensus 100.0 1.9E-74 4E-79 604.2 26.5 379 3-385 38-458 (470)
15 PRK11854 aceF pyruvate dehydro 100.0 7.8E-73 1.7E-77 658.0 40.8 379 3-384 206-620 (633)
16 PRK06115 dihydrolipoamide dehy 100.0 9.8E-71 2.1E-75 629.4 57.4 456 390-862 3-462 (466)
17 PRK06370 mercuric reductase; V 100.0 9.2E-70 2E-74 623.1 57.6 453 387-860 2-457 (463)
18 PRK07818 dihydrolipoamide dehy 100.0 1.7E-69 3.8E-74 620.8 58.7 459 389-865 3-465 (466)
19 PRK06327 dihydrolipoamide dehy 100.0 2.2E-69 4.8E-74 620.3 58.8 474 387-865 1-474 (475)
20 PRK07846 mycothione reductase; 100.0 1.5E-69 3.3E-74 615.8 54.9 444 390-859 1-449 (451)
21 TIGR01424 gluta_reduc_2 glutat 100.0 3.4E-69 7.4E-74 614.4 55.6 442 390-855 2-445 (446)
22 TIGR01421 gluta_reduc_1 glutat 100.0 4.1E-69 8.9E-74 612.7 55.1 442 389-855 1-449 (450)
23 TIGR01423 trypano_reduc trypan 100.0 4.5E-69 9.7E-74 613.2 54.1 451 389-856 2-471 (486)
24 PRK06116 glutathione reductase 100.0 8.2E-69 1.8E-73 613.5 54.8 444 387-855 1-449 (450)
25 PRK11855 dihydrolipoamide acet 100.0 1.4E-70 3.1E-75 631.6 40.3 379 3-384 119-534 (547)
26 PRK06416 dihydrolipoamide dehy 100.0 2.3E-68 4.9E-73 612.4 57.9 456 390-864 4-460 (462)
27 PRK05249 soluble pyridine nucl 100.0 1.3E-68 2.7E-73 614.8 55.7 452 389-861 4-458 (461)
28 TIGR03452 mycothione_red mycot 100.0 9.9E-69 2.1E-73 609.9 54.1 443 390-858 2-451 (452)
29 PRK07845 flavoprotein disulfid 100.0 2.4E-68 5.3E-73 609.7 57.1 455 391-862 2-462 (466)
30 PRK05976 dihydrolipoamide dehy 100.0 3E-68 6.5E-73 611.6 58.1 464 387-864 1-470 (472)
31 KOG0558|consensus 100.0 3.5E-72 7.5E-77 557.0 21.6 378 3-383 64-457 (474)
32 PLN02507 glutathione reductase 100.0 1.9E-68 4.2E-73 612.3 55.7 451 390-856 25-483 (499)
33 PLN02546 glutathione reductase 100.0 9E-69 2E-73 616.2 52.9 448 390-856 79-532 (558)
34 PRK06912 acoL dihydrolipoamide 100.0 3.8E-68 8.2E-73 607.9 57.4 453 392-865 2-457 (458)
35 PTZ00153 lipoamide dehydrogena 100.0 3E-68 6.5E-73 617.8 56.0 461 390-862 116-656 (659)
36 TIGR02053 MerA mercuric reduct 100.0 1.5E-67 3.2E-72 605.3 57.8 450 391-861 1-453 (463)
37 PRK14727 putative mercuric red 100.0 1.3E-67 2.9E-72 605.6 55.4 448 390-859 16-467 (479)
38 PRK11856 branched-chain alpha- 100.0 3.5E-69 7.6E-74 602.7 40.8 373 1-385 1-398 (411)
39 PRK14694 putative mercuric red 100.0 2.2E-67 4.8E-72 603.2 56.0 448 389-859 5-456 (468)
40 PTZ00058 glutathione reductase 100.0 2.3E-67 5E-72 603.9 53.3 443 390-857 48-558 (561)
41 TIGR01438 TGR thioredoxin and 100.0 4.7E-67 1E-71 598.5 55.3 456 390-858 2-470 (484)
42 PRK06292 dihydrolipoamide dehy 100.0 1.2E-66 2.5E-71 598.3 55.7 452 390-865 3-459 (460)
43 KOG0559|consensus 100.0 2.7E-70 5.7E-75 547.0 21.5 362 3-383 72-441 (457)
44 PRK13748 putative mercuric red 100.0 4.1E-66 8.8E-71 608.2 55.4 448 390-859 98-549 (561)
45 PRK08010 pyridine nucleotide-d 100.0 1.4E-65 3.1E-70 585.2 55.2 432 390-858 3-439 (441)
46 TIGR01350 lipoamide_DH dihydro 100.0 7.4E-65 1.6E-69 583.9 58.0 454 391-863 2-458 (461)
47 PTZ00052 thioredoxin reductase 100.0 6E-65 1.3E-69 584.1 52.0 453 387-856 2-478 (499)
48 KOG0405|consensus 100.0 1.1E-65 2.4E-70 516.4 37.7 443 389-852 19-468 (478)
49 PRK07251 pyridine nucleotide-d 100.0 3.7E-64 8E-69 573.1 55.2 430 390-856 3-436 (438)
50 PRK14843 dihydrolipoamide acet 100.0 4.3E-65 9.3E-70 545.6 27.8 285 99-384 47-334 (347)
51 PRK11857 dihydrolipoamide acet 100.0 7.3E-65 1.6E-69 534.4 27.9 283 101-384 2-292 (306)
52 KOG4716|consensus 100.0 2.4E-56 5.2E-61 446.8 32.0 455 388-853 17-485 (503)
53 PRK13512 coenzyme A disulfide 100.0 1.9E-52 4E-57 475.3 42.2 403 391-858 2-436 (438)
54 PRK09564 coenzyme A disulfide 100.0 1.2E-51 2.5E-56 472.4 41.4 405 392-854 2-435 (444)
55 PF00198 2-oxoacid_dh: 2-oxoac 100.0 1.9E-53 4E-58 433.7 23.2 215 169-384 3-218 (231)
56 TIGR03385 CoA_CoA_reduc CoA-di 100.0 4.4E-45 9.5E-50 415.5 38.4 342 495-852 53-420 (427)
57 PRK12270 kgd alpha-ketoglutara 100.0 1.8E-44 3.9E-49 405.7 21.8 214 170-384 115-343 (1228)
58 PRK14989 nitrite reductase sub 100.0 4.3E-42 9.4E-47 412.0 37.0 388 391-851 4-417 (847)
59 PRK09754 phenylpropionate diox 100.0 3.5E-38 7.5E-43 354.5 33.2 362 390-834 3-384 (396)
60 PRK04965 NADH:flavorubredoxin 100.0 4.1E-36 8.9E-41 335.9 34.2 349 391-820 3-367 (377)
61 TIGR02374 nitri_red_nirB nitri 100.0 6.3E-36 1.4E-40 360.1 34.5 367 393-838 1-385 (785)
62 TIGR01292 TRX_reduct thioredox 100.0 3.2E-32 7E-37 295.7 32.3 292 391-737 1-298 (300)
63 COG1252 Ndh NADH dehydrogenase 100.0 3.9E-33 8.4E-38 301.5 23.9 285 390-737 3-329 (405)
64 PTZ00318 NADH dehydrogenase-li 100.0 1.5E-32 3.3E-37 310.9 29.1 310 390-762 10-369 (424)
65 PRK10262 thioredoxin reductase 100.0 5.7E-32 1.2E-36 296.0 29.7 298 389-737 5-312 (321)
66 TIGR03140 AhpF alkyl hydropero 100.0 8.1E-32 1.8E-36 311.8 27.8 292 389-737 211-510 (515)
67 COG1251 NirB NAD(P)H-nitrite r 100.0 7.1E-32 1.5E-36 299.6 26.0 371 391-841 4-393 (793)
68 TIGR03143 AhpF_homolog putativ 100.0 2.1E-31 4.6E-36 310.5 31.2 294 387-736 1-305 (555)
69 COG0492 TrxB Thioredoxin reduc 100.0 1.1E-30 2.5E-35 277.0 30.0 290 390-737 3-298 (305)
70 TIGR01316 gltA glutamate synth 100.0 1.4E-31 3E-36 304.5 24.6 285 390-737 133-447 (449)
71 PRK12831 putative oxidoreducta 100.0 6.7E-31 1.5E-35 299.2 27.4 287 389-737 139-458 (464)
72 PRK15317 alkyl hydroperoxide r 100.0 1.3E-30 2.9E-35 302.1 29.3 291 390-737 211-509 (517)
73 KOG1336|consensus 100.0 6.5E-30 1.4E-34 272.6 28.5 365 391-838 75-462 (478)
74 PRK09853 putative selenate red 100.0 7.6E-30 1.6E-34 303.0 28.3 283 390-739 539-841 (1019)
75 TIGR03169 Nterm_to_SelD pyridi 100.0 7.5E-30 1.6E-34 284.6 25.9 280 392-737 1-308 (364)
76 PRK11749 dihydropyrimidine deh 100.0 2E-29 4.3E-34 288.5 26.3 285 390-737 140-449 (457)
77 PRK12770 putative glutamate sy 100.0 5.6E-29 1.2E-33 275.3 28.1 297 389-737 17-347 (352)
78 TIGR03315 Se_ygfK putative sel 100.0 5E-29 1.1E-33 297.9 28.8 282 390-738 537-838 (1012)
79 PRK12778 putative bifunctional 100.0 7.1E-29 1.5E-33 299.8 27.7 286 389-737 430-747 (752)
80 PRK12779 putative bifunctional 100.0 1.1E-28 2.4E-33 299.1 28.6 286 390-737 306-624 (944)
81 PRK12810 gltD glutamate syntha 100.0 3.1E-28 6.7E-33 279.1 27.8 290 390-737 143-462 (471)
82 PRK12814 putative NADPH-depend 100.0 8.9E-28 1.9E-32 284.3 27.7 283 390-736 193-497 (652)
83 TIGR01318 gltD_gamma_fam gluta 100.0 4E-27 8.7E-32 268.8 27.3 285 390-737 141-463 (467)
84 PRK12769 putative oxidoreducta 100.0 1E-26 2.2E-31 276.8 29.3 285 390-737 327-649 (654)
85 PRK12775 putative trifunctiona 100.0 6.3E-27 1.4E-31 286.5 27.6 286 390-736 430-751 (1006)
86 TIGR01317 GOGAT_sm_gam glutama 99.9 2.8E-26 6.1E-31 262.8 25.7 289 390-737 143-476 (485)
87 PRK12809 putative oxidoreducta 99.9 5.5E-26 1.2E-30 269.1 25.8 285 390-737 310-632 (639)
88 KOG2495|consensus 99.9 4.8E-26 1E-30 237.9 19.9 289 390-736 55-393 (491)
89 COG3634 AhpF Alkyl hydroperoxi 99.9 3.1E-26 6.7E-31 231.6 14.9 297 387-737 208-512 (520)
90 COG0446 HcaD Uncharacterized N 99.9 2.4E-24 5.1E-29 245.1 32.4 325 497-842 64-410 (415)
91 PRK13984 putative oxidoreducta 99.9 3.7E-25 8.1E-30 262.0 26.0 285 389-737 282-599 (604)
92 PLN02852 ferredoxin-NADP+ redu 99.9 3.6E-24 7.9E-29 241.0 26.5 293 390-738 26-420 (491)
93 KOG1346|consensus 99.9 5.9E-25 1.3E-29 226.8 15.5 411 390-841 178-651 (659)
94 PRK12771 putative glutamate sy 99.9 1.8E-23 3.8E-28 245.3 26.5 282 390-736 137-440 (564)
95 TIGR01372 soxA sarcosine oxida 99.9 3.6E-23 7.9E-28 255.5 29.9 283 390-736 163-468 (985)
96 KOG0404|consensus 99.9 9.9E-24 2.2E-28 201.2 19.0 298 387-734 5-313 (322)
97 PF02852 Pyr_redox_dim: Pyridi 99.9 1.4E-22 3E-27 184.0 14.7 110 747-856 1-110 (110)
98 PLN02172 flavin-containing mon 99.9 1.9E-21 4.2E-26 220.2 27.2 305 389-739 9-352 (461)
99 COG0493 GltD NADPH-dependent g 99.8 1.7E-19 3.6E-24 201.3 16.6 289 391-736 124-447 (457)
100 PF00743 FMO-like: Flavin-bind 99.8 3.3E-18 7.2E-23 196.3 22.8 313 391-739 2-396 (531)
101 PRK06567 putative bifunctional 99.8 2.5E-17 5.5E-22 193.7 21.8 288 390-736 383-766 (1028)
102 PF07992 Pyr_redox_2: Pyridine 99.8 2.5E-18 5.5E-23 174.9 11.0 190 392-718 1-200 (201)
103 PF00364 Biotin_lipoyl: Biotin 99.7 1.3E-17 2.8E-22 138.5 8.7 74 4-77 1-74 (74)
104 KOG0399|consensus 99.7 4.7E-17 1E-21 185.0 15.5 280 390-735 1785-2115(2142)
105 PF13738 Pyr_redox_3: Pyridine 99.7 3.5E-17 7.6E-22 166.8 12.3 192 394-605 1-202 (203)
106 KOG2755|consensus 99.7 3.4E-16 7.5E-21 153.7 16.3 264 393-716 2-321 (334)
107 COG3486 IucD Lysine/ornithine 99.7 3.4E-15 7.3E-20 157.1 24.6 331 387-739 2-414 (436)
108 PF13434 K_oxygenase: L-lysine 99.7 3.6E-16 7.7E-21 170.4 18.1 262 390-674 2-340 (341)
109 PRK14875 acetoin dehydrogenase 99.7 1.3E-16 2.7E-21 178.9 13.4 120 3-136 2-121 (371)
110 PRK05329 anaerobic glycerol-3- 99.7 2.3E-15 4.9E-20 167.6 22.9 158 573-738 218-419 (422)
111 PRK06748 hypothetical protein; 99.6 7.8E-16 1.7E-20 127.6 10.1 64 17-80 12-76 (83)
112 COG2072 TrkA Predicted flavopr 99.6 9.3E-16 2E-20 173.4 12.8 194 388-606 6-211 (443)
113 KOG1399|consensus 99.6 4.4E-14 9.5E-19 157.1 20.7 304 390-738 6-332 (448)
114 COG1148 HdrA Heterodisulfide r 99.6 9.6E-14 2.1E-18 147.8 21.7 200 529-736 297-541 (622)
115 PRK11892 pyruvate dehydrogenas 99.6 5.1E-14 1.1E-18 157.5 18.9 79 4-82 3-82 (464)
116 PTZ00188 adrenodoxin reductase 99.6 3.1E-13 6.7E-18 149.9 24.3 283 390-737 39-437 (506)
117 KOG1800|consensus 99.5 5.7E-13 1.2E-17 138.2 17.4 287 390-737 20-404 (468)
118 PRK05889 putative acetyl-CoA c 99.5 1.7E-13 3.7E-18 113.0 9.8 62 17-78 10-71 (71)
119 KOG3851|consensus 99.5 3E-13 6.4E-18 136.7 12.6 204 523-736 124-357 (446)
120 cd06663 Biotinyl_lipoyl_domain 99.4 7E-13 1.5E-17 110.5 10.3 72 6-77 2-73 (73)
121 PRK08225 acetyl-CoA carboxylas 99.4 2.7E-12 5.9E-17 105.7 9.1 62 17-78 9-70 (70)
122 PRK11854 aceF pyruvate dehydro 99.4 2.1E-12 4.6E-17 151.7 11.7 77 1-80 1-77 (633)
123 COG4529 Uncharacterized protei 99.4 3.1E-10 6.8E-15 123.7 27.0 206 391-603 2-231 (474)
124 TIGR02927 SucB_Actino 2-oxoglu 99.3 2.9E-12 6.3E-17 148.7 11.6 79 1-80 1-79 (590)
125 PF00070 Pyr_redox: Pyridine n 99.3 1.2E-11 2.7E-16 105.1 12.2 78 572-649 1-78 (80)
126 COG0511 AccB Biotin carboxyl c 99.3 4.3E-12 9.3E-17 118.9 8.3 62 17-78 78-139 (140)
127 PF00302 CAT: Chloramphenicol 99.3 6.5E-11 1.4E-15 118.4 16.7 174 192-384 24-204 (206)
128 PRK07051 hypothetical protein; 99.3 1.8E-11 4E-16 103.3 10.5 72 1-78 1-79 (80)
129 PRK13757 chloramphenicol acety 99.3 2.6E-10 5.7E-15 114.5 17.9 186 179-385 18-208 (219)
130 PRK06549 acetyl-CoA carboxylas 99.2 2.6E-11 5.7E-16 110.4 9.5 62 16-77 68-129 (130)
131 COG2081 Predicted flavoprotein 99.2 3.3E-11 7.2E-16 127.9 10.5 149 390-543 3-166 (408)
132 PRK08401 L-aspartate oxidase; 99.2 3.2E-11 6.9E-16 138.4 11.4 153 391-546 2-177 (466)
133 PRK11855 dihydrolipoamide acet 99.2 3.8E-11 8.3E-16 139.3 11.7 79 1-81 1-79 (547)
134 PRK05641 putative acetyl-CoA c 99.2 7.1E-11 1.5E-15 111.3 9.3 62 16-77 91-152 (153)
135 COG0029 NadB Aspartate oxidase 99.2 1.2E-10 2.6E-15 126.4 11.8 323 392-738 9-396 (518)
136 PRK06854 adenylylsulfate reduc 99.2 1.8E-10 4E-15 135.9 13.9 44 694-737 371-429 (608)
137 PF02817 E3_binding: e3 bindin 99.1 2.3E-11 5.1E-16 85.4 3.1 38 100-138 2-39 (39)
138 TIGR01348 PDHac_trf_long pyruv 99.1 1.4E-10 2.9E-15 133.9 10.9 75 5-80 2-76 (546)
139 PRK08275 putative oxidoreducta 99.1 3.2E-10 7E-15 133.0 14.1 45 693-737 357-402 (554)
140 TIGR00551 nadB L-aspartate oxi 99.1 4.4E-10 9.5E-15 130.0 14.7 32 390-422 2-33 (488)
141 PRK06263 sdhA succinate dehydr 99.1 4.6E-10 1E-14 131.4 14.8 47 692-738 348-402 (543)
142 PLN02983 biotin carboxyl carri 99.1 1.7E-10 3.6E-15 115.2 9.2 61 18-78 206-273 (274)
143 PRK07843 3-ketosteroid-delta-1 99.1 5.6E-10 1.2E-14 130.8 15.1 108 567-679 157-274 (557)
144 cd06850 biotinyl_domain The bi 99.1 3.8E-10 8.3E-15 92.3 9.4 62 16-77 6-67 (67)
145 PRK07804 L-aspartate oxidase; 99.1 1.1E-09 2.4E-14 127.9 16.5 34 390-423 16-49 (541)
146 PRK12842 putative succinate de 99.1 1.1E-09 2.5E-14 128.9 15.7 113 560-677 147-277 (574)
147 PRK06175 L-aspartate oxidase; 99.1 4.8E-10 1E-14 127.3 11.8 36 387-423 1-36 (433)
148 PRK13800 putative oxidoreducta 99.1 1.5E-09 3.2E-14 134.0 16.7 67 671-737 337-407 (897)
149 PRK08205 sdhA succinate dehydr 99.1 1.4E-09 3E-14 128.3 15.3 36 387-423 2-37 (583)
150 PRK09231 fumarate reductase fl 99.1 8.9E-10 1.9E-14 129.6 13.5 47 692-738 358-413 (582)
151 PRK09077 L-aspartate oxidase; 99.1 1.3E-09 2.8E-14 127.3 13.9 47 692-738 353-408 (536)
152 TIGR00531 BCCP acetyl-CoA carb 99.0 5.7E-10 1.2E-14 106.5 8.6 61 18-78 89-156 (156)
153 TIGR02061 aprA adenosine phosp 99.0 6.4E-09 1.4E-13 121.8 18.5 39 699-737 400-440 (614)
154 PRK09897 hypothetical protein; 99.0 8.1E-09 1.8E-13 118.6 18.5 187 391-592 2-213 (534)
155 cd06849 lipoyl_domain Lipoyl d 99.0 3E-09 6.6E-14 88.4 11.2 73 5-77 2-74 (74)
156 PRK07573 sdhA succinate dehydr 99.0 1.5E-09 3.2E-14 128.7 12.5 33 390-422 35-67 (640)
157 PRK06452 sdhA succinate dehydr 99.0 1.5E-09 3.3E-14 127.3 12.4 33 390-422 5-37 (566)
158 TIGR01176 fum_red_Fp fumarate 99.0 1.8E-09 3.9E-14 126.6 12.5 47 692-738 357-412 (580)
159 PRK08071 L-aspartate oxidase; 99.0 4.4E-09 9.6E-14 121.9 15.4 33 390-423 3-35 (510)
160 PRK07395 L-aspartate oxidase; 99.0 1.6E-09 3.5E-14 126.3 11.6 32 390-422 9-40 (553)
161 PRK06302 acetyl-CoA carboxylas 99.0 1.3E-09 2.9E-14 103.9 8.7 61 18-78 88-155 (155)
162 PRK08641 sdhA succinate dehydr 99.0 3.9E-09 8.4E-14 124.4 14.5 33 390-422 3-35 (589)
163 PLN02815 L-aspartate oxidase 99.0 2.3E-09 5E-14 125.5 12.1 32 390-422 29-60 (594)
164 PRK06134 putative FAD-binding 99.0 3.5E-09 7.5E-14 124.8 13.6 244 389-676 11-279 (581)
165 PF03486 HI0933_like: HI0933-l 99.0 2.4E-09 5.3E-14 119.2 11.2 146 391-545 1-167 (409)
166 PRK14042 pyruvate carboxylase 99.0 1.7E-09 3.6E-14 124.2 10.1 63 17-79 533-595 (596)
167 PLN00128 Succinate dehydrogena 99.0 2.4E-09 5.1E-14 126.6 11.6 33 390-422 50-82 (635)
168 TIGR01812 sdhA_frdA_Gneg succi 99.0 3.1E-09 6.8E-14 125.4 12.2 32 392-423 1-32 (566)
169 PTZ00139 Succinate dehydrogena 99.0 3.4E-09 7.4E-14 125.2 12.3 33 390-422 29-61 (617)
170 PRK05945 sdhA succinate dehydr 99.0 2.6E-09 5.7E-14 125.8 11.4 33 390-422 3-37 (575)
171 PRK06069 sdhA succinate dehydr 98.9 7.1E-09 1.5E-13 122.3 14.6 35 389-423 4-41 (577)
172 PRK08626 fumarate reductase fl 98.9 5.4E-09 1.2E-13 124.2 13.0 34 390-423 5-38 (657)
173 PRK09078 sdhA succinate dehydr 98.9 5.8E-09 1.3E-13 123.1 13.0 33 390-422 12-44 (598)
174 PRK07803 sdhA succinate dehydr 98.9 4.6E-09 1E-13 124.5 12.1 34 390-423 8-41 (626)
175 TIGR01811 sdhA_Bsu succinate d 98.9 1.7E-08 3.7E-13 119.0 15.1 46 692-737 370-423 (603)
176 TIGR00136 gidA glucose-inhibit 98.9 7.2E-08 1.6E-12 110.5 19.2 32 391-422 1-32 (617)
177 PRK07057 sdhA succinate dehydr 98.9 2.1E-08 4.5E-13 118.2 14.2 33 390-422 12-44 (591)
178 TIGR03378 glycerol3P_GlpB glyc 98.8 3.3E-06 7.1E-11 93.4 29.6 136 592-736 246-419 (419)
179 PRK08958 sdhA succinate dehydr 98.8 2.5E-08 5.5E-13 117.4 13.7 33 390-422 7-39 (588)
180 PRK07512 L-aspartate oxidase; 98.8 3.9E-08 8.4E-13 114.2 14.7 47 692-738 341-396 (513)
181 TIGR02712 urea_carbox urea car 98.8 8.6E-09 1.9E-13 128.9 9.8 62 17-78 1140-1201(1201)
182 TIGR01108 oadA oxaloacetate de 98.8 1.2E-08 2.5E-13 118.0 8.0 58 17-74 525-582 (582)
183 PRK05192 tRNA uridine 5-carbox 98.8 3.2E-08 6.9E-13 113.7 11.2 145 389-544 3-157 (618)
184 PRK14040 oxaloacetate decarbox 98.8 2E-08 4.3E-13 116.2 9.7 62 17-78 532-593 (593)
185 PRK04176 ribulose-1,5-biphosph 98.8 5.3E-08 1.2E-12 102.2 11.8 137 390-544 25-173 (257)
186 TIGR01235 pyruv_carbox pyruvat 98.7 3E-08 6.5E-13 122.7 9.5 67 11-78 1077-1143(1143)
187 COG0644 FixC Dehydrogenases (f 98.7 9.3E-08 2E-12 107.8 11.5 138 390-545 3-153 (396)
188 TIGR00292 thiazole biosynthesi 98.7 1.7E-07 3.7E-12 98.0 12.1 33 390-422 21-53 (254)
189 PRK09282 pyruvate carboxylase 98.6 9.1E-08 2E-12 111.1 9.3 62 17-78 530-591 (592)
190 COG4845 Chloramphenicol O-acet 98.6 1E-06 2.3E-11 84.1 14.2 171 192-383 27-205 (219)
191 COG3075 GlpB Anaerobic glycero 98.6 4.6E-06 1E-10 86.0 19.3 123 611-738 258-416 (421)
192 PRK10157 putative oxidoreducta 98.6 5.6E-07 1.2E-11 102.4 13.4 45 390-434 5-49 (428)
193 TIGR02028 ChlP geranylgeranyl 98.5 2.1E-07 4.6E-12 104.8 9.6 141 391-545 1-161 (398)
194 PRK06847 hypothetical protein; 98.5 4.4E-07 9.5E-12 101.8 12.1 37 387-423 1-37 (375)
195 PF12831 FAD_oxidored: FAD dep 98.5 6E-08 1.3E-12 110.2 4.7 142 392-542 1-148 (428)
196 COG1053 SdhA Succinate dehydro 98.5 6.8E-07 1.5E-11 103.4 13.2 36 388-423 4-39 (562)
197 COG4770 Acetyl/propionyl-CoA c 98.5 1.7E-07 3.6E-12 102.6 7.5 62 17-78 583-644 (645)
198 PRK08773 2-octaprenyl-3-methyl 98.5 8.1E-07 1.8E-11 100.3 13.1 36 388-423 4-39 (392)
199 COG1635 THI4 Ribulose 1,5-bisp 98.5 1.3E-06 2.9E-11 85.1 12.1 33 390-422 30-62 (262)
200 TIGR02032 GG-red-SF geranylger 98.5 8.4E-07 1.8E-11 95.8 12.1 33 391-423 1-33 (295)
201 PF01946 Thi4: Thi4 family; PD 98.5 9.9E-07 2.1E-11 86.8 10.7 132 390-544 17-165 (230)
202 PLN02661 Putative thiazole syn 98.5 6.7E-07 1.5E-11 96.1 10.4 139 390-544 92-244 (357)
203 COG2509 Uncharacterized FAD-de 98.5 1.7E-05 3.6E-10 86.0 20.8 45 694-738 438-482 (486)
204 PRK10015 oxidoreductase; Provi 98.5 4.1E-07 9E-12 103.4 9.4 45 390-434 5-49 (429)
205 PRK12999 pyruvate carboxylase; 98.5 3.6E-07 7.8E-12 113.9 9.4 62 17-78 1084-1145(1146)
206 PRK05335 tRNA (uracil-5-)-meth 98.5 1.2E-06 2.7E-11 96.4 12.3 34 391-424 3-36 (436)
207 PRK12845 3-ketosteroid-delta-1 98.4 5.7E-06 1.2E-10 96.9 18.4 54 390-450 16-72 (564)
208 TIGR01790 carotene-cycl lycope 98.4 1.2E-06 2.5E-11 98.9 12.4 140 392-544 1-141 (388)
209 TIGR01292 TRX_reduct thioredox 98.4 2.3E-06 5.1E-11 92.6 14.1 99 572-679 2-116 (300)
210 PF01134 GIDA: Glucose inhibit 98.4 1.8E-06 3.8E-11 94.4 12.8 129 392-542 1-150 (392)
211 PRK06834 hypothetical protein; 98.4 8.2E-07 1.8E-11 102.5 10.7 142 390-545 3-157 (488)
212 PF01266 DAO: FAD dependent ox 98.4 3.6E-06 7.9E-11 93.4 15.2 31 392-422 1-31 (358)
213 PRK08274 tricarballylate dehyd 98.4 9.2E-07 2E-11 102.2 10.4 36 387-422 1-36 (466)
214 PLN02463 lycopene beta cyclase 98.4 2.6E-06 5.6E-11 96.7 13.6 33 390-422 28-60 (447)
215 PRK06481 fumarate reductase fl 98.4 1.2E-06 2.6E-11 101.8 10.3 34 389-422 60-93 (506)
216 PF00890 FAD_binding_2: FAD bi 98.4 1E-06 2.2E-11 100.4 9.4 31 392-422 1-31 (417)
217 PF13454 NAD_binding_9: FAD-NA 98.4 1.2E-06 2.5E-11 84.9 8.3 29 394-422 1-34 (156)
218 PRK12409 D-amino acid dehydrog 98.3 2.7E-05 5.9E-10 88.5 19.9 60 612-674 198-257 (410)
219 PRK07608 ubiquinone biosynthes 98.3 4.9E-06 1.1E-10 93.8 13.5 34 390-423 5-38 (388)
220 PRK07333 2-octaprenyl-6-methox 98.3 2E-06 4.4E-11 97.5 10.5 33 391-423 2-36 (403)
221 PRK11728 hydroxyglutarate oxid 98.3 7.3E-06 1.6E-10 92.5 14.9 32 391-422 3-36 (393)
222 PRK08244 hypothetical protein; 98.3 1.3E-06 2.9E-11 101.6 9.0 34 390-423 2-35 (493)
223 PRK08163 salicylate hydroxylas 98.3 2.2E-06 4.8E-11 96.9 10.3 36 388-423 2-37 (396)
224 PRK13977 myosin-cross-reactive 98.3 1.4E-05 3E-10 91.4 16.5 99 579-679 191-297 (576)
225 COG1038 PycA Pyruvate carboxyl 98.3 9.7E-07 2.1E-11 99.7 6.8 67 11-78 1082-1148(1149)
226 PLN00093 geranylgeranyl diphos 98.3 2.5E-06 5.5E-11 97.2 10.3 33 390-422 39-71 (450)
227 PRK07494 2-octaprenyl-6-methox 98.3 5.7E-06 1.2E-10 93.3 12.5 36 388-423 5-40 (388)
228 PRK07364 2-octaprenyl-6-methox 98.3 1.5E-06 3.3E-11 98.9 7.9 36 388-423 16-51 (415)
229 TIGR02023 BchP-ChlP geranylger 98.3 2.8E-06 6.1E-11 95.7 9.8 32 391-422 1-32 (388)
230 PRK07121 hypothetical protein; 98.3 1E-05 2.3E-10 94.0 14.6 33 390-422 20-52 (492)
231 TIGR01377 soxA_mon sarcosine o 98.3 5.1E-05 1.1E-09 85.3 19.7 55 611-674 145-199 (380)
232 TIGR00275 flavoprotein, HI0933 98.3 3.6E-06 7.9E-11 94.8 10.3 138 394-544 1-160 (400)
233 PRK07190 hypothetical protein; 98.2 5.3E-06 1.1E-10 95.8 11.7 34 390-423 5-38 (487)
234 PRK05732 2-octaprenyl-6-methox 98.2 7.7E-06 1.7E-10 92.5 12.8 33 390-422 3-38 (395)
235 KOG2820|consensus 98.2 9.5E-06 2.1E-10 84.2 11.9 158 387-544 4-212 (399)
236 PRK08020 ubiF 2-octaprenyl-3-m 98.2 1.9E-06 4.1E-11 97.3 7.6 35 389-423 4-38 (391)
237 PRK06184 hypothetical protein; 98.2 2.6E-06 5.7E-11 99.3 8.6 35 390-424 3-37 (502)
238 PRK08013 oxidoreductase; Provi 98.2 1E-05 2.2E-10 91.5 13.0 35 390-424 3-37 (400)
239 PRK05714 2-octaprenyl-3-methyl 98.2 9.4E-06 2E-10 92.1 12.5 34 390-423 2-35 (405)
240 PRK09126 hypothetical protein; 98.2 7E-06 1.5E-10 92.7 11.4 34 390-423 3-36 (392)
241 PRK12844 3-ketosteroid-delta-1 98.2 2E-05 4.2E-10 92.7 15.2 44 390-439 6-49 (557)
242 PRK12834 putative FAD-binding 98.2 8.2E-06 1.8E-10 95.9 12.0 36 387-422 1-36 (549)
243 COG1249 Lpd Pyruvate/2-oxoglut 98.2 1.3E-05 2.8E-10 90.3 12.8 99 391-546 174-274 (454)
244 PRK08850 2-octaprenyl-6-methox 98.2 1.1E-05 2.5E-10 91.4 12.3 33 390-422 4-36 (405)
245 PLN02697 lycopene epsilon cycl 98.2 6E-06 1.3E-10 95.2 10.1 33 390-422 108-140 (529)
246 PRK08849 2-octaprenyl-3-methyl 98.2 1.1E-05 2.5E-10 90.6 12.2 33 390-422 3-35 (384)
247 PF01494 FAD_binding_3: FAD bi 98.2 2.7E-06 5.8E-11 94.4 7.0 34 391-424 2-35 (356)
248 PF05834 Lycopene_cycl: Lycope 98.2 3.8E-06 8.3E-11 93.9 8.2 32 392-423 1-34 (374)
249 TIGR01988 Ubi-OHases Ubiquinon 98.2 7.2E-06 1.6E-10 92.3 10.3 33 392-424 1-33 (385)
250 PF13450 NAD_binding_8: NAD(P) 98.2 2.6E-06 5.7E-11 69.4 4.8 38 395-438 1-38 (68)
251 TIGR01984 UbiH 2-polyprenyl-6- 98.2 7.3E-06 1.6E-10 92.2 10.1 33 392-424 1-34 (382)
252 COG2081 Predicted flavoprotein 98.2 2.4E-05 5.2E-10 83.9 13.3 98 571-676 4-168 (408)
253 PLN02172 flavin-containing mon 98.1 5.2E-05 1.1E-09 86.7 16.9 137 570-715 10-214 (461)
254 KOG0369|consensus 98.1 4.1E-06 8.9E-11 92.6 7.3 67 11-78 1109-1175(1176)
255 PRK07251 pyridine nucleotide-d 98.1 4.4E-05 9.5E-10 87.5 16.3 180 391-632 158-358 (438)
256 PRK11445 putative oxidoreducta 98.1 1E-05 2.3E-10 89.7 10.8 32 391-423 2-33 (351)
257 TIGR01813 flavo_cyto_c flavocy 98.1 2.1E-05 4.6E-10 90.2 13.5 31 392-422 1-32 (439)
258 PRK08243 4-hydroxybenzoate 3-m 98.1 6.5E-06 1.4E-10 92.9 9.1 34 390-423 2-35 (392)
259 TIGR01350 lipoamide_DH dihydro 98.1 3.9E-05 8.5E-10 88.6 15.7 181 391-633 171-374 (461)
260 cd06848 GCS_H Glycine cleavage 98.1 5E-06 1.1E-10 73.0 6.2 51 17-67 28-79 (96)
261 COG0579 Predicted dehydrogenas 98.1 4.5E-05 9.8E-10 84.5 14.9 60 611-676 153-212 (429)
262 TIGR03329 Phn_aa_oxid putative 98.1 3.9E-05 8.4E-10 88.4 14.5 33 390-422 24-58 (460)
263 PRK12839 hypothetical protein; 98.1 2.1E-05 4.5E-10 92.5 12.5 46 388-439 6-51 (572)
264 PRK07045 putative monooxygenas 98.1 7.7E-06 1.7E-10 92.2 8.5 36 389-424 4-39 (388)
265 PRK06185 hypothetical protein; 98.1 1.2E-05 2.6E-10 91.3 9.9 36 388-423 4-39 (407)
266 PRK12835 3-ketosteroid-delta-1 98.1 4.5E-05 9.8E-10 90.0 14.8 34 389-422 10-43 (584)
267 PRK12266 glpD glycerol-3-phosp 98.1 3.2E-05 6.8E-10 90.0 13.3 37 386-422 2-38 (508)
268 PF13738 Pyr_redox_3: Pyridine 98.1 2.6E-05 5.7E-10 79.2 11.2 98 574-679 1-144 (203)
269 TIGR02360 pbenz_hydroxyl 4-hyd 98.1 9.1E-06 2E-10 91.5 8.3 33 391-423 3-35 (390)
270 COG0654 UbiH 2-polyprenyl-6-me 98.1 4.7E-06 1E-10 93.8 5.9 33 390-422 2-34 (387)
271 PRK11259 solA N-methyltryptoph 98.1 4.3E-05 9.4E-10 85.7 13.7 33 390-422 3-35 (376)
272 PRK00711 D-amino acid dehydrog 98.0 0.00021 4.5E-09 81.4 19.2 56 611-674 201-256 (416)
273 PRK06753 hypothetical protein; 98.0 7.5E-06 1.6E-10 91.8 7.2 33 391-423 1-33 (373)
274 PRK04176 ribulose-1,5-biphosph 98.0 0.00019 4.1E-09 75.5 16.8 167 570-738 25-253 (257)
275 PRK07236 hypothetical protein; 98.0 3.6E-05 7.7E-10 86.7 12.1 34 390-423 6-39 (386)
276 PRK13369 glycerol-3-phosphate 98.0 4.8E-05 1E-09 88.6 13.2 37 386-422 2-38 (502)
277 TIGR03364 HpnW_proposed FAD de 98.0 9.1E-05 2E-09 82.8 15.0 32 391-422 1-32 (365)
278 TIGR00292 thiazole biosynthesi 98.0 0.00014 3.1E-09 76.2 15.0 167 570-737 21-251 (254)
279 PRK06183 mhpA 3-(3-hydroxyphen 98.0 1.1E-05 2.3E-10 95.0 7.4 34 390-423 10-43 (538)
280 PRK15317 alkyl hydroperoxide r 98.0 6.8E-05 1.5E-09 87.6 14.0 100 570-677 211-324 (517)
281 PRK07588 hypothetical protein; 98.0 1.7E-05 3.8E-10 89.5 8.6 33 391-423 1-33 (391)
282 PTZ00383 malate:quinone oxidor 98.0 0.00016 3.4E-09 83.2 16.3 56 611-675 211-273 (497)
283 TIGR01373 soxB sarcosine oxida 98.0 0.00027 5.8E-09 80.3 18.1 34 389-422 29-64 (407)
284 TIGR03140 AhpF alkyl hydropero 98.0 8.4E-05 1.8E-09 86.8 14.0 101 570-678 212-326 (515)
285 COG0445 GidA Flavin-dependent 97.9 3.5E-06 7.6E-11 92.9 2.1 34 389-422 3-36 (621)
286 PRK12837 3-ketosteroid-delta-1 97.9 0.00012 2.5E-09 85.5 14.8 32 390-422 7-38 (513)
287 KOG1335|consensus 97.9 0.00044 9.5E-09 73.2 17.0 146 391-593 212-367 (506)
288 PRK06996 hypothetical protein; 97.9 1.6E-05 3.4E-10 90.0 7.1 35 389-423 10-48 (398)
289 PRK09564 coenzyme A disulfide 97.9 6.3E-05 1.4E-09 86.5 12.0 104 571-679 1-119 (444)
290 PRK06126 hypothetical protein; 97.9 0.00012 2.7E-09 86.3 14.6 34 390-423 7-40 (545)
291 PRK06617 2-octaprenyl-6-methox 97.9 4E-05 8.8E-10 85.8 10.0 32 391-422 2-33 (374)
292 PTZ00363 rab-GDP dissociation 97.9 9.3E-05 2E-09 83.7 12.8 61 610-676 231-291 (443)
293 PRK12843 putative FAD-binding 97.9 0.00025 5.5E-09 83.8 16.9 44 390-439 16-59 (578)
294 PF03486 HI0933_like: HI0933-l 97.9 6.2E-05 1.3E-09 84.2 11.1 97 572-676 2-167 (409)
295 COG0665 DadA Glycine/D-amino a 97.9 0.00011 2.4E-09 82.8 13.3 35 389-423 3-37 (387)
296 PRK08132 FAD-dependent oxidore 97.9 4.2E-05 9E-10 90.3 10.0 34 390-423 23-56 (547)
297 PRK06847 hypothetical protein; 97.9 0.00016 3.5E-09 81.0 14.3 101 570-678 4-166 (375)
298 COG3380 Predicted NAD/FAD-depe 97.9 1.9E-05 4.1E-10 79.6 5.7 39 391-435 2-40 (331)
299 PRK11101 glpA sn-glycerol-3-ph 97.9 0.00037 8E-09 81.9 17.6 61 610-674 148-210 (546)
300 TIGR01989 COQ6 Ubiquinone bios 97.9 2.8E-05 6.1E-10 89.0 8.0 33 391-423 1-37 (437)
301 PRK05249 soluble pyridine nucl 97.9 0.00015 3.2E-09 83.8 14.0 99 390-546 175-274 (461)
302 PTZ00306 NADH-dependent fumara 97.9 5.8E-05 1.2E-09 96.0 11.4 41 389-435 408-448 (1167)
303 TIGR01789 lycopene_cycl lycope 97.9 4.5E-05 9.7E-10 85.0 9.2 31 392-422 1-33 (370)
304 KOG2415|consensus 97.9 6.9E-05 1.5E-09 79.6 9.7 47 389-441 75-127 (621)
305 PRK06327 dihydrolipoamide dehy 97.9 0.00019 4.1E-09 83.1 14.6 179 391-631 184-386 (475)
306 PRK05868 hypothetical protein; 97.8 2.2E-05 4.7E-10 87.8 6.3 33 391-423 2-34 (372)
307 PRK07846 mycothione reductase; 97.8 0.00021 4.5E-09 82.0 13.9 185 283-546 72-264 (451)
308 PF04820 Trp_halogenase: Trypt 97.8 0.00031 6.7E-09 80.3 15.2 60 611-677 154-213 (454)
309 TIGR03077 not_gcvH glycine cle 97.8 3.2E-05 7E-10 68.8 5.6 47 19-66 33-79 (110)
310 PLN02985 squalene monooxygenas 97.8 5.3E-05 1.1E-09 87.9 9.0 34 389-422 42-75 (514)
311 PRK01747 mnmC bifunctional tRN 97.8 7.6E-05 1.6E-09 90.0 10.5 33 390-422 260-292 (662)
312 PRK14694 putative mercuric red 97.8 0.00046 1E-08 79.7 16.4 96 391-546 179-275 (468)
313 TIGR01320 mal_quin_oxido malat 97.8 0.00049 1.1E-08 79.3 16.1 62 610-675 177-240 (483)
314 PF00070 Pyr_redox: Pyridine n 97.8 0.00013 2.8E-09 61.8 8.4 31 392-422 1-31 (80)
315 TIGR03219 salicylate_mono sali 97.8 6.9E-05 1.5E-09 85.2 8.9 32 392-423 2-34 (414)
316 PRK13339 malate:quinone oxidor 97.8 0.00052 1.1E-08 78.7 15.8 60 612-675 185-247 (497)
317 PRK05976 dihydrolipoamide dehy 97.7 0.00015 3.2E-09 84.0 11.3 101 391-546 181-283 (472)
318 PRK13512 coenzyme A disulfide 97.7 0.00018 3.9E-09 82.3 11.7 104 571-679 2-121 (438)
319 PRK07236 hypothetical protein; 97.7 0.0002 4.4E-09 80.6 12.0 100 570-677 6-156 (386)
320 COG1233 Phytoene dehydrogenase 97.7 2.9E-05 6.2E-10 89.8 5.2 56 610-673 223-279 (487)
321 PRK09754 phenylpropionate diox 97.7 0.00018 4E-09 81.2 11.4 98 570-677 3-114 (396)
322 KOG0368|consensus 97.7 4.5E-05 9.9E-10 91.3 6.5 65 16-81 692-756 (2196)
323 TIGR02032 GG-red-SF geranylger 97.7 0.00035 7.6E-09 75.3 13.0 97 572-675 2-148 (295)
324 PRK12770 putative glutamate sy 97.7 0.00013 2.7E-09 81.1 9.5 104 568-677 16-133 (352)
325 PRK07208 hypothetical protein; 97.7 3.1E-05 6.7E-10 90.0 4.8 44 387-436 1-44 (479)
326 PRK00624 glycine cleavage syst 97.7 7.8E-05 1.7E-09 66.8 6.2 43 19-62 35-77 (114)
327 PRK04965 NADH:flavorubredoxin 97.7 0.00017 3.7E-09 80.9 10.5 99 390-545 141-240 (377)
328 PF00743 FMO-like: Flavin-bind 97.7 0.00053 1.1E-08 79.6 14.6 138 570-715 1-193 (531)
329 TIGR03385 CoA_CoA_reduc CoA-di 97.7 0.00021 4.5E-09 81.7 11.3 96 391-545 138-234 (427)
330 TIGR02485 CobZ_N-term precorri 97.7 0.00015 3.3E-09 82.9 9.9 29 395-423 1-29 (432)
331 COG1231 Monoamine oxidase [Ami 97.7 0.00031 6.8E-09 76.8 11.4 41 390-436 7-47 (450)
332 PRK07818 dihydrolipoamide dehy 97.7 0.00027 5.8E-09 81.7 11.8 98 391-546 173-275 (466)
333 PRK06475 salicylate hydroxylas 97.6 0.00019 4.1E-09 81.2 10.1 33 391-423 3-35 (400)
334 KOG0238|consensus 97.6 4.1E-05 8.8E-10 82.9 4.2 61 18-78 610-670 (670)
335 PRK06416 dihydrolipoamide dehy 97.6 0.00021 4.5E-09 82.6 10.4 98 391-546 173-274 (462)
336 PRK06912 acoL dihydrolipoamide 97.6 0.00031 6.7E-09 80.9 11.7 98 391-546 171-270 (458)
337 TIGR00031 UDP-GALP_mutase UDP- 97.6 5.6E-05 1.2E-09 83.5 5.1 42 391-438 2-43 (377)
338 TIGR02374 nitri_red_nirB nitri 97.6 0.00022 4.7E-09 87.3 10.7 100 390-546 140-240 (785)
339 PRK13380 glycine cleavage syst 97.6 9.3E-05 2E-09 69.5 5.8 49 18-66 44-93 (144)
340 PF01494 FAD_binding_3: FAD bi 97.6 0.00082 1.8E-08 74.4 14.3 102 572-677 3-174 (356)
341 PF07992 Pyr_redox_2: Pyridine 97.6 0.0002 4.3E-09 72.5 8.5 103 572-679 1-126 (201)
342 PTZ00318 NADH dehydrogenase-li 97.6 0.00037 8.1E-09 79.3 11.4 109 570-679 10-129 (424)
343 TIGR01438 TGR thioredoxin and 97.6 0.00054 1.2E-08 79.2 12.7 97 391-546 181-281 (484)
344 PTZ00367 squalene epoxidase; P 97.6 0.00011 2.4E-09 85.9 6.9 35 389-423 32-66 (567)
345 PRK08244 hypothetical protein; 97.6 0.00078 1.7E-08 78.5 13.9 102 571-677 3-161 (493)
346 PRK10262 thioredoxin reductase 97.6 0.001 2.2E-08 72.9 13.9 101 569-679 5-121 (321)
347 PRK08294 phenol 2-monooxygenas 97.6 0.00064 1.4E-08 81.1 13.2 37 387-423 29-66 (634)
348 PRK07538 hypothetical protein; 97.6 0.00016 3.4E-09 82.3 7.8 33 391-423 1-33 (413)
349 PRK05675 sdhA succinate dehydr 97.5 0.00038 8.2E-09 82.1 11.1 45 693-737 340-403 (570)
350 PRK12779 putative bifunctional 97.5 0.00032 6.9E-09 86.8 10.6 93 569-677 305-407 (944)
351 PRK06834 hypothetical protein; 97.5 0.0011 2.3E-08 76.9 14.3 99 571-677 4-158 (488)
352 COG1635 THI4 Ribulose 1,5-bisp 97.5 0.0012 2.6E-08 65.0 12.0 168 570-737 30-257 (262)
353 KOG0399|consensus 97.5 0.0019 4.1E-08 76.4 15.5 185 570-774 1785-1994(2142)
354 PRK09853 putative selenate red 97.5 0.00048 1E-08 84.1 11.4 91 569-677 538-637 (1019)
355 KOG0029|consensus 97.5 8.1E-05 1.8E-09 85.1 4.6 40 390-435 15-54 (501)
356 TIGR00137 gid_trmFO tRNA:m(5)U 97.5 0.00023 5E-09 79.3 8.0 31 392-422 2-32 (433)
357 PRK05257 malate:quinone oxidor 97.5 0.0013 2.9E-08 75.8 14.6 35 389-423 4-40 (494)
358 TIGR01424 gluta_reduc_2 glutat 97.5 0.00047 1E-08 79.1 10.8 98 391-546 167-265 (446)
359 PRK06467 dihydrolipoamide dehy 97.5 0.00089 1.9E-08 77.3 12.9 32 391-422 175-206 (471)
360 TIGR03143 AhpF_homolog putativ 97.5 0.001 2.2E-08 78.4 13.6 98 571-679 5-118 (555)
361 PRK06370 mercuric reductase; V 97.5 0.00061 1.3E-08 78.7 11.6 100 391-546 172-273 (463)
362 KOG1336|consensus 97.5 0.00091 2E-08 73.4 11.9 104 390-547 213-316 (478)
363 TIGR03169 Nterm_to_SelD pyridi 97.5 0.00049 1.1E-08 76.9 10.3 97 572-679 1-111 (364)
364 PRK06116 glutathione reductase 97.5 0.0005 1.1E-08 79.1 10.6 99 391-546 168-267 (450)
365 COG0446 HcaD Uncharacterized N 97.5 0.0005 1.1E-08 78.0 10.5 99 390-545 136-238 (415)
366 PRK07845 flavoprotein disulfid 97.5 0.00057 1.2E-08 78.8 10.9 98 391-546 178-276 (466)
367 PLN02507 glutathione reductase 97.5 0.00057 1.2E-08 79.4 10.8 98 391-546 204-302 (499)
368 TIGR02053 MerA mercuric reduct 97.5 0.00061 1.3E-08 78.7 11.0 100 391-546 167-268 (463)
369 PRK11749 dihydropyrimidine deh 97.5 0.0003 6.4E-09 81.1 8.4 90 568-674 138-236 (457)
370 PLN02661 Putative thiazole syn 97.5 0.0051 1.1E-07 66.6 17.1 169 570-738 92-326 (357)
371 PRK14989 nitrite reductase sub 97.4 0.00058 1.3E-08 83.6 11.1 99 571-679 4-117 (847)
372 TIGR01316 gltA glutamate synth 97.4 0.00027 5.9E-09 81.0 7.7 93 569-678 132-234 (449)
373 PRK07364 2-octaprenyl-6-methox 97.4 0.0015 3.3E-08 74.3 13.8 103 570-677 18-183 (415)
374 PTZ00153 lipoamide dehydrogena 97.4 0.0015 3.3E-08 77.5 13.9 32 391-422 313-344 (659)
375 COG0562 Glf UDP-galactopyranos 97.4 0.00016 3.4E-09 75.0 4.8 42 390-437 1-42 (374)
376 PRK08773 2-octaprenyl-3-methyl 97.4 0.0015 3.3E-08 73.7 13.4 100 570-677 6-171 (392)
377 COG3349 Uncharacterized conser 97.4 0.00013 2.9E-09 81.2 4.5 42 391-438 1-42 (485)
378 TIGR01318 gltD_gamma_fam gluta 97.4 0.00062 1.4E-08 78.4 10.1 92 569-677 140-240 (467)
379 TIGR01421 gluta_reduc_1 glutat 97.4 0.00071 1.5E-08 77.6 10.5 99 391-546 167-267 (450)
380 PRK08132 FAD-dependent oxidore 97.4 0.0022 4.7E-08 75.8 14.7 103 570-677 23-187 (547)
381 PLN02463 lycopene beta cyclase 97.4 0.0015 3.2E-08 74.4 12.7 97 571-676 29-170 (447)
382 PRK06292 dihydrolipoamide dehy 97.4 0.0025 5.4E-08 73.6 14.9 99 391-547 170-271 (460)
383 PRK06184 hypothetical protein; 97.4 0.0021 4.4E-08 75.2 14.2 100 571-675 4-168 (502)
384 TIGR02730 carot_isom carotene 97.4 0.00015 3.4E-09 84.3 4.6 57 611-675 229-286 (493)
385 PRK08255 salicylyl-CoA 5-hydro 97.4 0.00048 1E-08 84.1 9.0 32 391-422 1-34 (765)
386 TIGR02733 desat_CrtD C-3',4' d 97.4 0.00016 3.6E-09 84.1 4.8 61 610-674 231-293 (492)
387 PRK08163 salicylate hydroxylas 97.4 0.0019 4.2E-08 72.9 13.4 100 570-677 4-168 (396)
388 PRK11883 protoporphyrinogen ox 97.3 0.00015 3.3E-09 83.5 4.4 39 392-436 2-42 (451)
389 PRK06183 mhpA 3-(3-hydroxyphen 97.3 0.0022 4.9E-08 75.5 14.2 104 570-677 10-176 (538)
390 PLN02576 protoporphyrinogen ox 97.3 0.00016 3.6E-09 84.3 4.7 42 390-437 12-54 (496)
391 PRK07233 hypothetical protein; 97.3 0.00016 3.6E-09 82.7 4.6 56 611-674 198-253 (434)
392 PLN02568 polyamine oxidase 97.3 0.0002 4.2E-09 83.5 5.2 44 387-436 2-50 (539)
393 COG0654 UbiH 2-polyprenyl-6-me 97.3 0.0019 4.2E-08 72.7 13.0 100 571-677 3-164 (387)
394 TIGR00562 proto_IX_ox protopor 97.3 0.00016 3.5E-09 83.5 4.4 41 391-437 3-47 (462)
395 PRK07333 2-octaprenyl-6-methox 97.3 0.0022 4.8E-08 72.6 13.5 98 572-677 3-169 (403)
396 TIGR03452 mycothione_red mycot 97.3 0.00093 2E-08 76.8 10.4 97 391-546 170-267 (452)
397 PRK01202 glycine cleavage syst 97.3 0.00065 1.4E-08 62.6 7.3 61 19-80 40-107 (127)
398 COG0578 GlpA Glycerol-3-phosph 97.3 0.00087 1.9E-08 76.1 9.7 62 610-674 163-224 (532)
399 PRK07588 hypothetical protein; 97.3 0.0024 5.1E-08 72.1 13.3 98 572-678 2-161 (391)
400 PRK05714 2-octaprenyl-3-methyl 97.3 0.0014 2.9E-08 74.5 11.4 99 571-677 3-170 (405)
401 PRK09783 copper/silver efflux 97.3 0.00086 1.9E-08 75.6 9.6 66 16-81 130-244 (409)
402 PTZ00052 thioredoxin reductase 97.3 0.0013 2.7E-08 76.5 11.1 97 391-546 183-280 (499)
403 PLN02268 probable polyamine ox 97.3 0.00022 4.7E-09 81.8 4.7 40 391-436 1-40 (435)
404 PRK08010 pyridine nucleotide-d 97.3 0.0013 2.8E-08 75.4 11.1 97 391-546 159-256 (441)
405 KOG2614|consensus 97.3 0.0017 3.6E-08 70.2 10.9 34 390-423 2-35 (420)
406 PLN02852 ferredoxin-NADP+ redu 97.3 0.00097 2.1E-08 76.2 9.4 91 569-676 25-127 (491)
407 TIGR02734 crtI_fam phytoene de 97.3 0.00021 4.7E-09 83.4 4.3 56 611-674 219-275 (502)
408 PRK06115 dihydrolipoamide dehy 97.3 0.0015 3.3E-08 75.3 11.2 100 391-546 175-278 (466)
409 PRK05868 hypothetical protein; 97.2 0.0031 6.7E-08 70.6 13.2 99 571-677 2-162 (372)
410 PRK06475 salicylate hydroxylas 97.2 0.0036 7.7E-08 70.9 13.9 102 571-677 3-169 (400)
411 PF06100 Strep_67kDa_ant: Stre 97.2 0.0027 5.8E-08 70.8 12.1 95 580-676 173-275 (500)
412 PRK12831 putative oxidoreducta 97.2 0.00074 1.6E-08 77.6 8.2 94 569-677 139-243 (464)
413 KOG2495|consensus 97.2 0.0012 2.7E-08 71.1 8.9 96 391-546 219-331 (491)
414 PRK14727 putative mercuric red 97.2 0.0019 4.2E-08 74.8 11.4 96 391-546 189-285 (479)
415 PRK13748 putative mercuric red 97.2 0.0018 3.9E-08 76.8 11.4 96 391-546 271-367 (561)
416 KOG2311|consensus 97.2 0.0013 2.7E-08 71.6 8.8 33 390-422 28-60 (679)
417 KOG1399|consensus 97.2 0.0071 1.5E-07 68.2 15.1 141 569-716 5-197 (448)
418 PTZ00058 glutathione reductase 97.2 0.0021 4.5E-08 75.3 11.3 98 391-545 238-337 (561)
419 TIGR01317 GOGAT_sm_gam glutama 97.2 0.0013 2.9E-08 76.0 9.7 89 569-674 142-239 (485)
420 PRK10559 p-hydroxybenzoic acid 97.2 0.0009 2E-08 72.5 7.8 65 16-80 54-188 (310)
421 TIGR00998 8a0101 efflux pump m 97.2 0.001 2.2E-08 73.3 8.3 35 47-81 205-239 (334)
422 PRK12810 gltD glutamate syntha 97.2 0.0015 3.2E-08 75.5 9.9 90 569-675 142-240 (471)
423 PRK12775 putative trifunctiona 97.2 0.0011 2.3E-08 83.0 9.3 94 569-677 429-532 (1006)
424 PRK07608 ubiquinone biosynthes 97.2 0.0042 9E-08 70.0 13.3 98 571-677 6-169 (388)
425 PTZ00188 adrenodoxin reductase 97.2 0.0024 5.2E-08 72.0 11.0 91 569-676 38-139 (506)
426 PF01266 DAO: FAD dependent ox 97.2 0.0049 1.1E-07 68.2 13.7 55 614-677 150-205 (358)
427 TIGR01984 UbiH 2-polyprenyl-6- 97.2 0.0043 9.4E-08 69.7 13.3 96 572-675 1-162 (382)
428 COG1252 Ndh NADH dehydrogenase 97.1 0.0015 3.3E-08 72.1 9.2 100 570-680 3-116 (405)
429 PRK09126 hypothetical protein; 97.1 0.005 1.1E-07 69.5 13.7 100 571-678 4-170 (392)
430 TIGR01423 trypano_reduc trypan 97.1 0.0021 4.6E-08 74.2 10.7 99 391-546 188-290 (486)
431 PRK07190 hypothetical protein; 97.1 0.005 1.1E-07 71.3 13.7 97 571-675 6-165 (487)
432 PRK07045 putative monooxygenas 97.1 0.0055 1.2E-07 69.0 13.7 101 571-677 6-167 (388)
433 TIGR02731 phytoene_desat phyto 97.1 0.00041 8.9E-09 79.9 4.5 39 392-436 1-39 (453)
434 PF13533 Biotin_lipoyl_2: Biot 97.1 0.001 2.2E-08 50.4 5.1 35 46-80 2-36 (50)
435 PF01134 GIDA: Glucose inhibit 97.1 0.0051 1.1E-07 67.6 12.6 94 572-673 1-150 (392)
436 TIGR00527 gcvH glycine cleavag 97.1 0.00073 1.6E-08 62.3 5.0 42 25-66 44-85 (127)
437 PRK12809 putative oxidoreducta 97.1 0.0018 3.9E-08 77.6 9.8 91 569-676 309-408 (639)
438 TIGR01988 Ubi-OHases Ubiquinon 97.1 0.0054 1.2E-07 69.0 13.2 97 572-676 1-164 (385)
439 PRK12416 protoporphyrinogen ox 97.1 0.00043 9.3E-09 80.0 4.3 41 391-437 2-48 (463)
440 TIGR01816 sdhA_forward succina 97.1 0.002 4.3E-08 76.0 9.9 47 692-738 331-395 (565)
441 PRK10157 putative oxidoreducta 97.1 0.0067 1.4E-07 69.2 13.8 97 571-675 6-164 (428)
442 PRK06753 hypothetical protein; 97.1 0.0057 1.2E-07 68.5 13.2 98 572-677 2-154 (373)
443 PRK12778 putative bifunctional 97.1 0.0015 3.2E-08 80.1 8.9 93 569-677 430-532 (752)
444 PRK08020 ubiF 2-octaprenyl-3-m 97.1 0.0036 7.8E-08 70.6 11.5 99 571-677 6-171 (391)
445 PRK01438 murD UDP-N-acetylmura 97.0 0.0017 3.6E-08 75.5 8.9 90 569-689 15-105 (480)
446 TIGR03315 Se_ygfK putative sel 97.0 0.0018 3.8E-08 79.7 9.3 90 570-677 537-635 (1012)
447 COG1232 HemY Protoporphyrinoge 97.0 0.00052 1.1E-08 76.8 4.2 39 392-436 2-42 (444)
448 PRK08013 oxidoreductase; Provi 97.0 0.0065 1.4E-07 68.8 13.2 99 571-677 4-170 (400)
449 TIGR01730 RND_mfp RND family e 97.0 0.0011 2.4E-08 72.6 6.5 66 16-81 33-169 (322)
450 PLN02546 glutathione reductase 97.0 0.0038 8.2E-08 73.1 11.1 99 391-546 253-352 (558)
451 PRK08243 4-hydroxybenzoate 3-m 97.0 0.0064 1.4E-07 68.6 12.3 103 571-678 3-166 (392)
452 PRK12814 putative NADPH-depend 96.9 0.003 6.6E-08 75.8 9.9 91 569-676 192-291 (652)
453 COG0492 TrxB Thioredoxin reduc 96.9 0.0097 2.1E-07 63.9 12.7 99 571-679 4-119 (305)
454 PRK12784 hypothetical protein; 96.9 0.0064 1.4E-07 48.6 8.2 65 16-80 12-77 (84)
455 PRK12769 putative oxidoreducta 96.9 0.0031 6.7E-08 76.0 9.9 90 569-675 326-424 (654)
456 PRK06617 2-octaprenyl-6-methox 96.9 0.0088 1.9E-07 67.0 12.9 97 572-677 3-162 (374)
457 PLN02529 lysine-specific histo 96.9 0.00081 1.8E-08 80.3 4.7 33 390-422 160-192 (738)
458 PRK10476 multidrug resistance 96.9 0.0022 4.8E-08 70.9 7.7 35 47-81 209-243 (346)
459 PLN02676 polyamine oxidase 96.9 0.00089 1.9E-08 77.4 4.7 42 389-436 25-67 (487)
460 PRK09897 hypothetical protein; 96.9 0.014 3.1E-07 67.7 14.1 99 571-676 2-167 (534)
461 PRK06996 hypothetical protein; 96.8 0.01 2.2E-07 67.1 12.8 100 570-674 11-173 (398)
462 PRK06126 hypothetical protein; 96.8 0.013 2.8E-07 69.2 14.1 103 570-676 7-189 (545)
463 PLN02697 lycopene epsilon cycl 96.8 0.012 2.6E-07 68.3 13.3 97 571-675 109-248 (529)
464 PF13533 Biotin_lipoyl_2: Biot 96.8 0.0013 2.9E-08 49.7 3.7 29 16-44 9-37 (50)
465 KOG2404|consensus 96.8 0.0043 9.4E-08 64.2 8.4 38 392-435 11-48 (477)
466 PRK06185 hypothetical protein; 96.8 0.016 3.5E-07 65.7 14.2 102 570-676 6-170 (407)
467 PRK08849 2-octaprenyl-3-methyl 96.8 0.011 2.4E-07 66.4 12.8 100 571-678 4-170 (384)
468 TIGR02732 zeta_caro_desat caro 96.8 0.001 2.3E-08 76.7 4.5 39 392-436 1-39 (474)
469 PRK07494 2-octaprenyl-6-methox 96.8 0.013 2.8E-07 66.0 13.2 97 571-676 8-168 (388)
470 KOG1298|consensus 96.8 0.0024 5.3E-08 67.7 6.4 33 390-422 45-77 (509)
471 PF06039 Mqo: Malate:quinone o 96.8 0.012 2.6E-07 65.0 12.0 69 612-687 182-253 (488)
472 PLN02464 glycerol-3-phosphate 96.8 0.0013 2.7E-08 78.4 4.9 34 389-422 70-103 (627)
473 COG0493 GltD NADPH-dependent g 96.8 0.0043 9.2E-08 70.3 8.8 91 570-677 123-223 (457)
474 TIGR01790 carotene-cycl lycope 96.8 0.013 2.9E-07 65.9 13.0 95 572-675 1-141 (388)
475 PRK15136 multidrug efflux syst 96.8 0.003 6.6E-08 70.8 7.6 35 47-81 216-250 (390)
476 KOG2852|consensus 96.8 0.012 2.6E-07 60.3 10.8 37 386-422 6-48 (380)
477 TIGR02023 BchP-ChlP geranylger 96.8 0.019 4.2E-07 64.6 14.0 104 572-676 2-156 (388)
478 TIGR00275 flavoprotein, HI0933 96.7 0.012 2.6E-07 66.4 12.3 93 574-675 1-160 (400)
479 PRK08850 2-octaprenyl-6-methox 96.7 0.015 3.1E-07 66.0 12.9 99 571-677 5-170 (405)
480 PRK10015 oxidoreductase; Provi 96.7 0.019 4.1E-07 65.5 13.7 97 571-675 6-164 (429)
481 KOG2853|consensus 96.7 0.041 8.8E-07 57.7 14.4 49 390-438 86-141 (509)
482 KOG0685|consensus 96.7 0.0017 3.8E-08 71.1 4.7 41 389-435 20-61 (498)
483 PF01597 GCV_H: Glycine cleava 96.7 0.0038 8.2E-08 57.2 6.2 39 25-63 39-77 (122)
484 PRK05732 2-octaprenyl-6-methox 96.7 0.019 4.2E-07 64.8 13.5 98 571-676 4-170 (395)
485 PLN02927 antheraxanthin epoxid 96.7 0.0014 3.1E-08 77.2 4.3 34 389-422 80-113 (668)
486 PRK09578 periplasmic multidrug 96.7 0.0037 8E-08 70.2 7.5 65 16-80 70-207 (385)
487 PF00732 GMC_oxred_N: GMC oxid 96.7 0.0012 2.7E-08 71.3 3.4 71 613-687 195-268 (296)
488 PRK03598 putative efflux pump 96.6 0.0035 7.6E-08 68.9 6.9 34 47-80 204-237 (331)
489 TIGR01372 soxA sarcosine oxida 96.6 0.018 3.9E-07 72.6 13.9 109 570-678 163-289 (985)
490 COG0644 FixC Dehydrogenases (f 96.6 0.021 4.5E-07 64.5 13.2 99 571-676 4-153 (396)
491 PLN02487 zeta-carotene desatur 96.6 0.0019 4.1E-08 75.4 4.7 40 390-435 75-114 (569)
492 PLN02328 lysine-specific histo 96.6 0.0019 4E-08 77.7 4.7 34 390-423 238-271 (808)
493 TIGR02462 pyranose_ox pyranose 96.6 0.002 4.2E-08 74.6 4.7 32 391-422 1-32 (544)
494 PRK12771 putative glutamate sy 96.6 0.0058 1.3E-07 72.3 8.8 90 569-676 136-235 (564)
495 TIGR03219 salicylate_mono sali 96.6 0.011 2.5E-07 67.1 10.9 97 572-676 2-160 (414)
496 PRK11728 hydroxyglutarate oxid 96.6 0.026 5.6E-07 63.7 13.3 32 572-603 4-37 (393)
497 PRK11445 putative oxidoreducta 96.6 0.031 6.7E-07 62.0 13.7 100 572-677 3-159 (351)
498 COG2072 TrkA Predicted flavopr 96.5 0.048 1E-06 62.3 15.4 137 570-717 8-187 (443)
499 PRK07538 hypothetical protein; 96.5 0.027 5.8E-07 64.1 13.4 103 572-677 2-167 (413)
500 PRK13984 putative oxidoreducta 96.5 0.0092 2E-07 71.3 9.9 90 569-675 282-380 (604)
No 1
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=100.00 E-value=4.7e-83 Score=700.94 Aligned_cols=379 Identities=54% Similarity=0.875 Sum_probs=327.8
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ ++|+||+||++|+||+|++|+|++||.|++||+|++|||||+++||+||++|+|.++++++|+.|++|++|++++.+
T Consensus 1 m~-~~i~~P~lg~~~~eg~i~~w~v~~Gd~V~~Gd~l~~vEtdK~~~ei~a~~~G~v~~i~v~~G~~V~~G~~l~~i~~~ 79 (407)
T PRK05704 1 MM-VEIKVPTLPESVTEATIATWHKKPGDAVKRDEVLVEIETDKVVLEVPAPAAGVLSEILAEEGDTVTVGQVLGRIDEG 79 (407)
T ss_pred CC-eeEecCCCCCCCceEEEEEEEeCCcCEeCCCCEEEEEEecCceeEEecCCCEEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 44 59999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred Cccccc---c-ccc-c---ccc----c-ccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccccc
Q psy9583 81 ISKLSS---K-TEI-K---NKK----D-IKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNIN 147 (866)
Q Consensus 81 ~~~~~~---~-~~~-~---~~~----~-~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~ 147 (866)
++..+. + .++ + +++ + .......+||+||+||+|+||||++| +|||++|||+++||++|+...+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gidl~~v-~gtG~~GrI~~~DV~~~~~~~~~~~ 158 (407)
T PRK05704 80 AAAGAAAAAAAAAAAAAAAPAQAQAAAAAEQSNDALSPAARKLAAENGLDASAV-KGTGKGGRVTKEDVLAALAAAAAAP 158 (407)
T ss_pred CcccccCCCCCCCCCCCCCCCCCCCCccCCCccccCCchhhhHHhhcCCChhhC-CCCCCCCcccHHHHHHHhhcccccC
Confidence 432110 0 000 0 000 0 00112468999999999999999999 8999999999999999974321111
Q ss_pred cccccccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccC
Q psy9583 148 EEKQEKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLG 227 (866)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t 227 (866)
.++. ..+. ...+........+.+||++|||+||++|++||+++||||++.++|+|+|+++|+++++.+.++.|.|+|
T Consensus 159 ~~~~--~~~~-~~~~~~~~~~~~~~vpls~~rk~ia~~m~~S~~~iPh~~~~~evd~~~l~~~r~~~~~~~~~~~~~kls 235 (407)
T PRK05704 159 AAPA--AAAP-AAAPAPLGARPEERVPMTRLRKTIAERLLEAQNTTAMLTTFNEVDMTPVMDLRKQYKDAFEKKHGVKLG 235 (407)
T ss_pred CCCC--CCCC-cCCCccccCCcceEeeChHHHHHHHHHHHHHhhcCCeEEEEEEEeHHHHHHHHHHHHhhhHhhcCCCcC
Confidence 0000 0000 000000001123568999999999999999999999999999999999999999999877666689999
Q ss_pred HHHHHHHHHHHHHHhCCccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCc
Q psy9583 228 FMSFFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLP 307 (866)
Q Consensus 228 ~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 307 (866)
+++||+||+++||++||.||++|+++++++++++||||||++++||+||||||+|++|+.||++++++|.+|+|+|+|++
T Consensus 236 ~~~~likA~a~AL~~~P~~Na~~~~~~i~~~~~~nIgiAv~~~~GLivPVI~~a~~~sl~eIa~~~~~l~~~ar~g~L~~ 315 (407)
T PRK05704 236 FMSFFVKAVVEALKRYPEVNASIDGDDIVYHNYYDIGIAVGTPRGLVVPVLRDADQLSFAEIEKKIAELAKKARDGKLSI 315 (407)
T ss_pred HHHHHHHHHHHHHHhCcHhhcEEcCCeEEEcCCCCeEEEEECCCceEeCcCCCcccCCHHHHHHHHHHHHHHHHcCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 308 EEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 308 ~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
+|++||||||||+|++|+.+|+|||||||+||||+|++.++|++.+|++++|++|+++|+||||++||+++++|+..
T Consensus 316 ~d~~ggTfTiSNlG~~G~~~~tpiIn~pq~aILgvG~i~~~pv~~~g~i~~r~~~~lsls~DHRviDGa~aa~Fl~~ 392 (407)
T PRK05704 316 EELTGGTFTITNGGVFGSLMSTPIINPPQSAILGMHKIKERPVAVNGQIVIRPMMYLALSYDHRIIDGKEAVGFLVT 392 (407)
T ss_pred HHcCCceEEEecCCcccccceeccccCCcEEEEEcccceEEeEEECCEEEEEEEEEEEEEechhhhCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988764
No 2
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=100.00 E-value=1.5e-82 Score=694.96 Aligned_cols=375 Identities=50% Similarity=0.848 Sum_probs=326.0
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCcc
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDISK 83 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~~ 83 (866)
.+|+||+||++|+||+|++|+|++||.|++||+|++|||||+++|++||.+|+|.++++++|+.|++|++|++++.+++.
T Consensus 1 ~~i~~P~lg~~~~eg~i~~w~v~~Gd~V~~g~~l~~vEtdK~~~ei~a~~~G~v~~i~~~eG~~v~vG~~l~~i~~~~~~ 80 (403)
T TIGR01347 1 IEIKVPELAESITEGTVAEWHKKVGDTVKRDENIVEIETDKVVLEVPSPADGVLQEILFKEGDTVESGQVLAILEEGNDA 80 (403)
T ss_pred CeEecCCCCCCCceEEEEEEEeCCcCEeCCCCEEEEEEEcceeeEEecCCCEEEEEEEeCCCCEeCCCCEEEEEecCCCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999864321
Q ss_pred cc---c-cc---cccc-cc--c---ccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhcccccccc
Q psy9583 84 LS---S-KT---EIKN-KK--D---IKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEEK 150 (866)
Q Consensus 84 ~~---~-~~---~~~~-~~--~---~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~~~ 150 (866)
.+ + .. ..+. .+ + ....+..+||+||+||+|+||||+.| +|||++|||+++||++|+...+..+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gvdl~~v-~gtG~~GrI~~~DV~~~~~~~~~~~--~ 157 (403)
T TIGR01347 81 TAAPPAKSGEEKEETPAASAAAAPTAAANRPSLSPAARRLAKEHGIDLSAV-PGTGVTGRVTKEDIIKKTEAPASAQ--A 157 (403)
T ss_pred cccccccccCCCCCCCCCCCCCCCcCccccccCCchhhhHHHHcCCChhhC-CCCCCCCcccHHHHHHhhhcccccC--C
Confidence 10 0 00 0000 00 0 01123468999999999999999999 8999999999999999974311110 0
Q ss_pred ccccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHH
Q psy9583 151 QEKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMS 230 (866)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~ 230 (866)
+. ..+..+. + .......+.+||++|||+||++|++||+++||+|++.++|+|+|+++|+++++.+.++.|.++|+++
T Consensus 158 ~~-~~~~~~~-~-~~~~~~~~~~pls~~r~~ia~~m~~S~~~ip~~~~~~evd~t~l~~~r~~~~~~~~~~~~~kls~~~ 234 (403)
T TIGR01347 158 PA-PAAAAKA-P-ANFTRPEERVKMTRLRQRIAERLKEAQNSTAMLTTFNEVDMSAVMELRKRYKEEFEKKHGVKLGFMS 234 (403)
T ss_pred CC-CCcccCC-c-cccCCCceEeeCcHHHHHHHHHHHHHhccCCEEEEEEEEEHHHHHHHHHHHHhhhHhhcCCCcCHHH
Confidence 00 0000000 0 0001123568999999999999999999999999999999999999999999877666689999999
Q ss_pred HHHHHHHHHHHhCCccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCcccc
Q psy9583 231 FFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEM 310 (866)
Q Consensus 231 ~~~ka~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~ 310 (866)
||+||+++||++||.||++|+++++++++++||||||++++||+|||||++|++|+.+|++++++|.+|+|+|+|+++|+
T Consensus 235 ~likA~a~AL~~~P~~Na~~~~~~i~~~~~vnIgvAv~~~~GL~vPVIr~ad~~sl~eIa~~~~~l~~~ar~gkL~~~d~ 314 (403)
T TIGR01347 235 FFVKAVVAALKRFPEVNAEIDGDDIVYKDYYDISVAVSTDRGLVVPVVRNADRMSFADIEKEIADLGKKARDGKLTLEDM 314 (403)
T ss_pred HHHHHHHHHHHhCcHhheEEcCCEEEEcCCCCeEEEEECCCCeEECcCCCcccCCHHHHHHHHHHHHHHHHcCCCChhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 311 SGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 311 ~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
+||||||||+|++|+.+|+|||||||+||||+|++.++|++.+|++++|++|+++|+||||++||+++++|+..
T Consensus 315 ~ggTfTISNlG~~G~~~~tpiin~pq~aILgvG~i~~~pv~~~g~i~~r~~m~lsLt~DHRviDGa~aa~Fl~~ 388 (403)
T TIGR01347 315 TGGTFTITNGGVFGSLMSTPIINPPQSAILGMHGIKERPVAVNGQIEIRPMMYLALSYDHRLIDGKEAVTFLVT 388 (403)
T ss_pred CCceEEEecCCcCcccceeccccCCceEEEecccceEEEEEECCeEEEEEEEEEEEEecchhhChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988764
No 3
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=100.00 E-value=5.1e-80 Score=683.85 Aligned_cols=452 Identities=46% Similarity=0.756 Sum_probs=421.2
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+.+||++|||+||||+.||.++++.|.+|++||+. ..+||+|+|.||+|+|.+++.++.++.+.+....+|+..
T Consensus 2 ~~~yDvvVIG~GpaG~~aA~raa~~G~kvalvE~~------~~lGGtCln~GCIPsK~Ll~~a~~~~~~~~~~~~~Gi~~ 75 (454)
T COG1249 2 MKEYDVVVIGAGPAGYVAAIRAAQLGLKVALVEKG------ERLGGTCLNVGCIPSKALLHAAEVIEEARHAAKEYGISA 75 (454)
T ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCEEEEeec------CCcCceEEeeCccccHHHHHHHHHHHHHhhcccccceec
Confidence 34699999999999999999999999999999996 479999999999999999999999988876333688887
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
....++|.++..+++.+...+...+..++++++|+++.|++.+.++ +++.|...+.++++++++||||||+|+.|
T Consensus 76 ~~~~id~~~~~~~k~~v~~~~~~~~~~l~~~~~V~vi~G~a~f~~~-----~~v~V~~~~~~~~~a~~iiIATGS~p~~~ 150 (454)
T COG1249 76 EVPKIDFEKLLARKDKVVRLLTGGVEGLLKKNGVDVIRGEARFVDP-----HTVEVTGEDKETITADNIIIATGSRPRIP 150 (454)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhhhHHHHHhhCCCEEEEEEEEECCC-----CEEEEcCCCceEEEeCEEEEcCCCCCcCC
Confidence 7668999999999999888888999999999999999999999987 89999654348999999999999999999
Q ss_pred CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCE
Q psy9583 548 PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 627 (866)
|+++.++..++++++.+.+.+.|++++|||||++|+|+|+.|+++|++||++++.+++++.+|+++++.+.+.|++.|+.
T Consensus 151 ~~~~~~~~~~~~s~~~l~~~~lP~~lvIiGgG~IGlE~a~~~~~LG~~VTiie~~~~iLp~~D~ei~~~~~~~l~~~gv~ 230 (454)
T COG1249 151 PGPGIDGARILDSSDALFLLELPKSLVIVGGGYIGLEFASVFAALGSKVTVVERGDRILPGEDPEISKELTKQLEKGGVK 230 (454)
T ss_pred CCCCCCCCeEEechhhcccccCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCCcCCHHHHHHHHHHHHhCCeE
Confidence 99888888899999977777999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
+++++.+++++..++++.+.++...+. ++++|.+++|+|++||++.|+|++.|++++++|+|.||++++|++||
T Consensus 231 i~~~~~v~~~~~~~~~v~v~~~~g~~~------~~~ad~vLvAiGR~Pn~~~LgLe~~Gv~~~~rg~I~VD~~~~Tnvp~ 304 (454)
T COG1249 231 ILLNTKVTAVEKKDDGVLVTLEDGEGG------TIEADAVLVAIGRKPNTDGLGLENAGVELDDRGFIKVDDQMTTNVPG 304 (454)
T ss_pred EEccceEEEEEecCCeEEEEEecCCCC------EEEeeEEEEccCCccCCCCCChhhcCceECCCCCEEeCCccccCCCC
Confidence 999999999998777777777633322 78899999999999999999999999999999999999888899999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchh
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISG-QKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSR 786 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~ 786 (866)
|||+|||+++++++|.|.+||++||+||++ .....++..+|+++|++|++++||+||+||++.+++|.+.+++|..+.|
T Consensus 305 IyA~GDV~~~~~Lah~A~~eg~iaa~~i~g~~~~~~d~~~iP~~ift~Peia~VGlte~ea~~~g~~~~~~~~~f~~~~r 384 (454)
T COG1249 305 IYAIGDVIGGPMLAHVAMAEGRIAAENIAGGKRTPIDYRLIPSVVFTDPEIASVGLTEEEAKEAGIDYKVGKFPFAANGR 384 (454)
T ss_pred EEEeeccCCCcccHhHHHHHHHHHHHHHhCCCCCcCcccCCCEEEECCCcceeeeCCHHHHHhcCCceEEEEeecccchh
Confidence 999999999999999999999999999997 5556789999999999999999999999999999999999999999999
Q ss_pred hhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 787 ARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 787 ~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
+...++..||+|+++|+++++|||+|++|++|.|||+.+++||++++|.+|++.++|+|||++|.+.+++
T Consensus 385 a~~~~~~~G~~Klv~d~~t~~IlGahivg~~A~ElI~~~~~a~~~g~t~~~~~~~i~~HPT~sE~~~~a~ 454 (454)
T COG1249 385 AITMGETDGFVKLVVDKETGRILGAHIVGPGASELINEIALAIEMGATAEDLALTIHAHPTLSEALKEAA 454 (454)
T ss_pred HHhccCCceEEEEEEECCCCeEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCCCCCCChHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998874
No 4
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=100.00 E-value=3.1e-80 Score=688.28 Aligned_cols=372 Identities=31% Similarity=0.453 Sum_probs=321.9
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC-EEecCCEEEEEecCCc
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS-IVTSNQVIALIDTDIS 82 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~-~v~~g~~l~~~~~~~~ 82 (866)
++|+||+||++|+||+|++|+|++||.|++||+|++|||||+++|++||.+|+|.+|++++|+ .|++|++|+++..+++
T Consensus 113 ~ei~mP~lg~~m~eg~I~~W~vkeGD~V~~g~~l~eVETDKa~~evea~~~G~l~ki~~~eG~~~v~vG~~ia~i~~~~~ 192 (539)
T PLN02744 113 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGAKEIKVGEVIAITVEEEE 192 (539)
T ss_pred ceEeCCCCCCCcceeEEEEEEecCCCEecCCCeeEEEeeccceeEecCCCCcEEEEEEecCCCcccCCCCEEEEEccCcc
Confidence 689999999999999999999999999999999999999999999999999999999999996 7999999999843211
Q ss_pred c--------c-----cc-cc---cc---c------ccc--c--c--------cccccccchhHHHhhhhCCCCcccccCC
Q psy9583 83 K--------L-----SS-KT---EI---K------NKK--D--I--------KNLNTIVMPSAKKILSDNNLEISKINNG 124 (866)
Q Consensus 83 ~--------~-----~~-~~---~~---~------~~~--~--~--------~~~~~~~~p~~r~~a~~~~~d~~~v~~g 124 (866)
+ . ++ +. .+ . +++ . . ...+..+||+||+||+|+||||+.| +|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ASP~aRrLAre~GVDLs~V-~G 271 (539)
T PLN02744 193 DIGKFKDYKPSSSAAPAAPKAKPSPPPPKEEEVEKPASSPEPKASKPSAPPSSGDRIFASPLARKLAEDNNVPLSSI-KG 271 (539)
T ss_pred ccccccccccccccccccccccCCCCCcccccccCCCCCcccccccccccccccccccCCchhHHHHHHcCCCHHHC-CC
Confidence 1 0 00 00 00 0 000 0 0 0112458999999999999999999 89
Q ss_pred CCCCCceeehhHHhhhhhccccccccccccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeec
Q psy9583 125 TGKDGRIIKEDVLKVLSSIKNINEEKQEKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINM 204 (866)
Q Consensus 125 tg~~g~i~~~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~ 204 (866)
|||+|||+++||++|+........ .+ .+ .+.. ......+.+|+++|||.||++|++|++++||+|++.++|+
T Consensus 272 TGp~GRI~k~DV~a~~~~~~~~~~-~~---~~--~~~~--~~~~~~~~vpls~~Rk~IA~~m~~S~~~iPh~t~~~evdv 343 (539)
T PLN02744 272 TGPDGRIVKADIEDYLASGGKGAT-AP---PS--TDSK--APALDYTDIPNTQIRKVTASRLLQSKQTIPHYYLTVDTRV 343 (539)
T ss_pred CCCCCcccHHHHHHHhhccccccC-CC---CC--cccC--CCCCccccccchhHHHHHHHHHHHHHhhCCeEEEEEEEEc
Confidence 999999999999999743111100 00 00 0000 0011235689999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCC
Q psy9583 205 QSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTM 284 (866)
Q Consensus 205 t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~ 284 (866)
|+|+++|+++++.+.+..|.|+|+++||+||+++||++||++|++|+++.+++++++||||||++++||+||||||+|++
T Consensus 344 t~L~~lR~~l~~~~~~~~g~kls~~~~liKA~a~AL~~~P~lNa~~~~~~i~~~~~vnIgvAV~t~~GL~vPVIr~ad~~ 423 (539)
T PLN02744 344 DKLMALRSQLNSLQEASGGKKISVNDLVIKAAALALRKVPQCNSSWTDDYIRQYHNVNINVAVQTENGLYVPVVKDADKK 423 (539)
T ss_pred HHHHHHHHHHHHHhhhcccCccCHHHHHHHHHHHHHHhCcHhheeeccCcEEEeCCcceEEEEECCCCeEECcCCCcccC
Confidence 99999999999776665689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCC-CcCccccccccCCCceEEEEeccceeeEEE--eCCeeEeeee
Q psy9583 285 SIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGG-VFGSMLSTPIINPPQSAILGVHAIKKRVIV--ENNNVVIRPI 361 (866)
Q Consensus 285 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g-~~g~~~~~~ii~~p~~~il~vg~~~~~~~~--~~~~~~ir~~ 361 (866)
|+.||++++++|.+++|+|+|+++|++||||||||+| +||+.+|||||||||+||||+|++.++|++ .+|++++|++
T Consensus 424 sl~eIa~ei~~L~~kAr~~kL~~~dl~GGTfTISNlGg~~G~~~ftpIInpPqvaILgvG~i~~~pvv~~~~g~i~~r~~ 503 (539)
T PLN02744 424 GLSTIAEEVKQLAQKARENSLKPEDYEGGTFTVSNLGGPFGIKQFCAIINPPQSAILAVGSAEKRVIPGSGPDQYNFASF 503 (539)
T ss_pred CHHHHHHHHHHHHHHHHcCCCChhhcCCceEEEeCCCcccccceeeccccCCcEEEEEcccceeEeEEeccCCeEEEeee
Confidence 9999999999999999999999999999999999998 899999999999999999999999999998 4899999999
Q ss_pred eeeeecccccccccchhhhhhhh
Q psy9583 362 NYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 362 ~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+++|+||||++||+++++|+..
T Consensus 504 m~lsLs~DHRvIDGa~AA~FL~~ 526 (539)
T PLN02744 504 MSVTLSCDHRVIDGAIGAEWLKA 526 (539)
T ss_pred eEEeEecchhhhCcHHHHHHHHH
Confidence 99999999999999999988764
No 5
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=100.00 E-value=6.5e-80 Score=708.03 Aligned_cols=381 Identities=32% Similarity=0.534 Sum_probs=322.2
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCcc
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDISK 83 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~~ 83 (866)
++|+||+||++|+||+|++|+|++||.|++||+||+|||||+++||+||++|+|.++++++|+.|++|++|+.|+.+++.
T Consensus 136 ~~~~~P~lg~~~~eg~i~~w~v~~Gd~V~~g~~l~~vEtdKa~~ev~s~~~G~v~~i~v~~G~~v~vG~~l~~i~~~~~~ 215 (590)
T TIGR02927 136 TDIEMPELGESVTEGTITQWLKAVGDKIEVDEPILEVSTDKVDTEIPSPVAGTILEILAEEDDTVDVGAEIAKIGDAGAA 215 (590)
T ss_pred eEEEcCCCCCCcceEEEEEEEeCCCCEecCCCEeEEEEecceeeEEcCCCCeEEEEEecCCCCEecCCCEEEEEecCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999753211
Q ss_pred c-------c---c------cccc---c-----ccc--------cc------------cccccccchhHHHhhhhCCCCcc
Q psy9583 84 L-------S---S------KTEI---K-----NKK--------DI------------KNLNTIVMPSAKKILSDNNLEIS 119 (866)
Q Consensus 84 ~-------~---~------~~~~---~-----~~~--------~~------------~~~~~~~~p~~r~~a~~~~~d~~ 119 (866)
. . + ...+ + ..+ .. +..++.+||+||+||+|+||||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gvdl~ 295 (590)
T TIGR02927 216 AAEDAKAEEEAEAKAEAKPEEKPDPKKDEAAEPEPDEPEAEKAEKKEEKAAAAPAANSDGSPYVTPLVRKLAAEHGIDLN 295 (590)
T ss_pred cccccccccccccccccccCCCCccccccccccccccccccccccccccccccccccccCcccCCchhHHHHHHcCCCHH
Confidence 0 0 0 0000 0 000 00 00134689999999999999999
Q ss_pred cccCCCCCCCceeehhHHhhhhhcccc-ccccc-cc-cCCCc--cccccccC---CCccccccCchhHHHHHHHHHHhcc
Q psy9583 120 KINNGTGKDGRIIKEDVLKVLSSIKNI-NEEKQ-EK-YKPYL--DSISIKNN---SRLEECVPMSRLRLCIAERLLQSQA 191 (866)
Q Consensus 120 ~v~~gtg~~g~i~~~Dv~~~~~~~~~~-~~~~~-~~-~~~~~--~~~~~~~~---~~~~~~~~~~~~r~~ia~~m~~s~~ 191 (866)
.| +|||++|||+++||++|+...... ..+.. .. ..+.. .+...+.. ....+.+||++|||.||++|++||+
T Consensus 296 ~v-~GtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pls~~rk~ia~~m~~S~~ 374 (590)
T TIGR02927 296 SV-KGTGIGGRIRKQDVLAAAEGAKAAAEAPAAEAAAAAPAAAAAASASPAPAKAHLRGTTQKANRIREITAKKTREALQ 374 (590)
T ss_pred HC-CCCCCCCeEeHHHHHHHHhccccccccccccccccCccccccccCCCccccccccCceeeccHHHHHHHHHHHHHhc
Confidence 99 899999999999999997532110 00000 00 00000 00000000 0123568999999999999999999
Q ss_pred ccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeC--CeeEEccceeEEEEEec
Q psy9583 192 NSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDG--NNIIYHKYYDIGIAISS 269 (866)
Q Consensus 192 ~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~--~~~~~~~~~~i~~av~~ 269 (866)
++||||++.++|+|+|+++|+++++.+.+.++.|+||++||+||++.||++||.||++|++ +.|++++++||||||++
T Consensus 375 ~iPh~~~~~evdvt~l~~~R~~l~~~~~~~~~~kls~~~~iiKA~a~AL~~~P~~Na~~~~~~~~i~~~~~vnigvAv~t 454 (590)
T TIGR02927 375 ASAQLTQLHEVDMTKIAALRARAKAAFAEKEGVNLTFLPFFAKAVIDALKAHPNVNASYNADTKEITYHAAEHLGFAVDT 454 (590)
T ss_pred cCCeEEEEeEEEcHHHHHHHHHHHhhhHHhcCCcccHHHHHHHHHHHHHHhCCHhheEEecCCCEEEEeCCccEEEEEEC
Confidence 9999999999999999999999998766666899999999999999999999999999974 47999999999999999
Q ss_pred CCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeE
Q psy9583 270 SRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRV 349 (866)
Q Consensus 270 ~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~ 349 (866)
++||+||||||+|+|||.+|++++++|.+|+|+|+|+++||+||||||||+|++|+++|+|||||||+||||+|++.++|
T Consensus 455 ~~GL~vPvIk~a~~~sl~~ia~~i~~l~~kAr~gkL~p~e~~GgTfTISNlG~~G~~~~tpIIn~PqvaILgvG~i~~~p 534 (590)
T TIGR02927 455 DAGLLSPVIHNAGDLSLGEIAKAIADIAARARNGKLKPDDLAGGTFTITNIGSEGALFDTPILIPPQAAILGTGAIVKRP 534 (590)
T ss_pred CCCcEecccCCcccCCHHHHHHHHHHHHHHHHcCCCChHHhCCCeEEEECCCCCCccceeceecCCCeEEEEcccceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeC---C--eeEeeeeeeeeecccccccccchhhhhhhhh
Q psy9583 350 IVEN---N--NVVIRPINYFALSYDHRIIDGREAVLSLMSF 385 (866)
Q Consensus 350 ~~~~---~--~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~~ 385 (866)
++.+ | .+++|++|+++|+||||++||+.+++|+...
T Consensus 535 v~~~~~~g~~~~~~~~~m~lsls~DHRviDGa~aa~Fl~~l 575 (590)
T TIGR02927 535 RVITDEDGIDSIAIRQMCHLPLTYDHQLIDGADAGRFLTTI 575 (590)
T ss_pred EEeccCCCcccEEEEeeEEEeeeccchhcCcHHHHHHHHHH
Confidence 9852 3 4999999999999999999999999888653
No 6
>KOG1335|consensus
Probab=100.00 E-value=2.7e-77 Score=607.82 Aligned_cols=463 Identities=50% Similarity=0.824 Sum_probs=438.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhh-hhhhcCccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKN-SFFEYGINT 467 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~-~~~~~gi~~ 467 (866)
++|||+|||+||+|+.||+++++.|++.+.||++ ..+||+|+|.||+|||.+++.++.++.+.+ .+...|+..
T Consensus 38 ~d~DvvvIG~GpGGyvAAikAaQlGlkTacvEkr------~~LGGTcLnvGcIPSKALL~nSh~yh~~q~~~~~~rGi~v 111 (506)
T KOG1335|consen 38 NDYDVVVIGGGPGGYVAAIKAAQLGLKTACVEKR------GTLGGTCLNVGCIPSKALLNNSHLYHEAQHEDFASRGIDV 111 (506)
T ss_pred ccCCEEEECCCCchHHHHHHHHHhcceeEEEecc------CccCceeeeccccccHHHhhhhHHHHHHhhhHHHhcCccc
Confidence 4699999999999999999999999999999997 799999999999999999999999998887 778899998
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCc
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~ 545 (866)
....+|+..+....+..++.+...+..++++++|+++.|...+.++ +.+.+...+| ..+.++++||||||.-.
T Consensus 112 s~~~~dl~~~~~~k~~~vk~Lt~gi~~lfkknkV~~~kG~gsf~~p-----~~V~v~k~dg~~~ii~aKnIiiATGSeV~ 186 (506)
T KOG1335|consen 112 SSVSLDLQAMMKAKDNAVKQLTGGIENLFKKNKVTYVKGFGSFLDP-----NKVSVKKIDGEDQIIKAKNIIIATGSEVT 186 (506)
T ss_pred cceecCHHHHHHHHHHHHHHHhhHHHHHhhhcCeEEEeeeEeecCC-----ceEEEeccCCCceEEeeeeEEEEeCCccC
Confidence 8889999999999999999999999999999999999999999998 9999987665 78999999999999766
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.+||...++..+.++..++.+.+.|++++|||+|++|+|++..+.++|.+||+++..+.+.+.+|.++++.+++.|.++|
T Consensus 187 ~~PGI~IDekkIVSStgALsL~~vPk~~~viG~G~IGLE~gsV~~rLGseVT~VEf~~~i~~~mD~Eisk~~qr~L~kQg 266 (506)
T KOG1335|consen 187 PFPGITIDEKKIVSSTGALSLKEVPKKLTVIGAGYIGLEMGSVWSRLGSEVTVVEFLDQIGGVMDGEISKAFQRVLQKQG 266 (506)
T ss_pred CCCCeEecCceEEecCCccchhhCcceEEEEcCceeeeehhhHHHhcCCeEEEEEehhhhccccCHHHHHHHHHHHHhcC
Confidence 67798889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
+.|++++.|..++.+++ .+.+++++..+. ...+++||.+++++|++|.+..|++++.|++.|.+|++.||..++|.
T Consensus 267 ikF~l~tkv~~a~~~~dg~v~i~ve~ak~~---k~~tle~DvlLVsiGRrP~t~GLgle~iGi~~D~r~rv~v~~~f~t~ 343 (506)
T KOG1335|consen 267 IKFKLGTKVTSATRNGDGPVEIEVENAKTG---KKETLECDVLLVSIGRRPFTEGLGLEKIGIELDKRGRVIVNTRFQTK 343 (506)
T ss_pred ceeEeccEEEEeeccCCCceEEEEEecCCC---ceeEEEeeEEEEEccCcccccCCChhhcccccccccceecccccccc
Confidence 99999999999999877 677777753322 25689999999999999999999999999999999999999999999
Q ss_pred CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 705 ~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
+|+||++||+..+|+++|.|-.||..+.+.|.+.....+|..+|.+.|+.||++|||+||+|+++.|++|+++++||..+
T Consensus 344 vP~i~~IGDv~~gpMLAhkAeeegI~~VE~i~g~~~hv~ynciP~v~ythPEvawVG~TEeqlkeegi~y~vgkfpF~aN 423 (506)
T KOG1335|consen 344 VPHIYAIGDVTLGPMLAHKAEEEGIAAVEGIAGGHGHVDYNCIPSVVYTHPEVAWVGKTEEQLKEEGIKYKVGKFPFSAN 423 (506)
T ss_pred CCceEEecccCCcchhhhhhhhhchhheeeecccCcccccCCCCceeecccceeeeccchhhHHhcCcceEeeecccccc
Confidence 99999999999999999999999999999999988778899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhh-hc
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIEN-RS 863 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~-~~ 863 (866)
.|+....+.+||+|+++|+++++|||+||+|++|.|||++.++||..|++.+|++..+|+|||+||++.+|.+.++- +.
T Consensus 424 sRaktn~d~eg~vKvl~d~~tdkiLGvHiigp~AgEli~EA~lAieyGasaeDvarvchaHPTlSEa~kEa~~aA~~~k~ 503 (506)
T KOG1335|consen 424 SRAKTNNDTEGFVKVLADKETDKILGVHIIGPNAGELIHEASLAIEYGASAEDVARVCHAHPTLSEAFKEANMAAYDGKP 503 (506)
T ss_pred chhhccCCccceeEEEecCCCCcEEEEEEecCCHHHHHHHHHHHHHhCccHHHHhhccCCCCcHHHHHHHHHHHhhccCC
Confidence 99999888999999999999999999999999999999999999999999999999999999999999999998864 66
Q ss_pred cC
Q psy9583 864 IN 865 (866)
Q Consensus 864 ~~ 865 (866)
+|
T Consensus 504 Ih 505 (506)
T KOG1335|consen 504 IH 505 (506)
T ss_pred CC
Confidence 65
No 7
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=100.00 E-value=1.4e-78 Score=672.33 Aligned_cols=377 Identities=32% Similarity=0.499 Sum_probs=320.7
Q ss_pred EEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCE-EecCCEEEEEecCCcc
Q psy9583 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSI-VTSNQVIALIDTDISK 83 (866)
Q Consensus 5 ~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~-v~~g~~l~~~~~~~~~ 83 (866)
+|+||++|++|+||+|++|++++||.|++||+||+|||||+++|++||.+|+|.++++++|+. |++|++|++|+.+++.
T Consensus 1 ~i~~P~lg~~~~eg~i~~w~v~~Gd~V~~g~~l~~vetdKa~~ei~a~~~G~l~~i~v~~g~~~v~vG~~l~~i~~~~~~ 80 (435)
T TIGR01349 1 KITMPALSPTMTTGNLAKWLKKEGDKVNPGDVIAEIETDKATMEFEAVEEGYLAKILVPEGTKDVPVNKPIAVLVEEKED 80 (435)
T ss_pred CcccCCCCCCcceEEEEEEEeCCCCccCCCCEEEEEEecceeeEEcCCCCEEEEEEEECCCCEEecCCCEEEEEeccCCc
Confidence 378999999999999999999999999999999999999999999999999999999999999 9999999999643211
Q ss_pred cc-------------c--c---c-c-c----cc--cc-----cc----c------ccccccchhHHHhhhhCCCCccccc
Q psy9583 84 LS-------------S--K---T-E-I----KN--KK-----DI----K------NLNTIVMPSAKKILSDNNLEISKIN 122 (866)
Q Consensus 84 ~~-------------~--~---~-~-~----~~--~~-----~~----~------~~~~~~~p~~r~~a~~~~~d~~~v~ 122 (866)
.+ + + . . + .+ .+ .. . ..+.++||+||+||+|+||||+.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~vR~lA~e~gvdl~~v- 159 (435)
T TIGR01349 81 VADAFKNYKLESSASAPKPSEIAPTAPPSAPKPSPAPQKQSPEPSSPAPLSDKESGDRIFASPLAKKLAKEKGIDLSAV- 159 (435)
T ss_pred cccccccccccccccCCCCcccccCCCCcCCCCCCCccccccccccccccccccccccccCCHHHHHHHHHcCCCHhHC-
Confidence 00 0 0 0 0 0 00 00 00 0 012458999999999999999999
Q ss_pred CCCCCCCceeehhHHhhhhhccccccccccccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeee
Q psy9583 123 NGTGKDGRIIKEDVLKVLSSIKNINEEKQEKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEI 202 (866)
Q Consensus 123 ~gtg~~g~i~~~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~ 202 (866)
+|||++|||+++||++|+...+.....++....+.....+.+......+.+||++|||.|+++|++|++++||+|++.++
T Consensus 160 ~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ls~~rk~ia~~m~~S~~~ip~~~~~~ev 239 (435)
T TIGR01349 160 AGSGPNGRIVKKDIESFVPQSPASANFQAAATTPATKKAAAPVSTGSYEDVPLSNIRKIIAKRLLESKQTIPHYYVSIEC 239 (435)
T ss_pred CCCCCCCceeHHHHHHHHhcccccCCCccccccccccccCCCccCCcceeecccHHHHHHHHHHHHHHhhCCeEEEEEEE
Confidence 79999999999999999753111111000000000000000001112456899999999999999999999999999999
Q ss_pred echHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCC
Q psy9583 203 NMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNAD 282 (866)
Q Consensus 203 d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~ 282 (866)
|+|+|+++|+++++.+.+ +.++|+++||+||+++||++||.||++|+++++++++++||||||++++||++|||||+|
T Consensus 240 d~t~l~~~r~~~~~~~~~--~~klt~~~~l~kA~a~AL~~~P~~Na~~~~~~i~~~~~vnigvAv~~~~GL~vPvi~~a~ 317 (435)
T TIGR01349 240 NVDKLLALRKELNAMASE--VYKLSVNDFIIKASALALREVPEANSSWTDNFIRRYKNVDISVAVATPDGLITPIVRNAD 317 (435)
T ss_pred EhHHHHHHHHHHHhhhhc--CCcccHHHHHHHHHHHHHHhCcHhheEEeCCeEEEeCCeeEEEEEECCCCeEECCCCCcc
Confidence 999999999999876433 789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCe---eEee
Q psy9583 283 TMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNN---VVIR 359 (866)
Q Consensus 283 ~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~---~~ir 359 (866)
+||+.||++++++|.+++|+|+|.++|++||||||||+|++|+.+|+|||||||+||||+|++.++|++.+++ +++|
T Consensus 318 ~~sl~eia~~i~~l~~~ar~~~L~~~d~~ggTfTISNlG~~G~~~~tpiin~pq~aIlgvG~i~~~pv~~~~~~~~i~~~ 397 (435)
T TIGR01349 318 AKGLSTISNEIKDLAKRARNNKLKPEEFQGGTFTISNLGMFGIKDFTAIINPPQACILAVGAVEDVAVVDNDEEKGFAVA 397 (435)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCChhhcCCCeEEEecCCccCccceECccCCCceEEEEcccceEEeEEeCCccceeEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998777 9999
Q ss_pred eeeeeeecccccccccchhhhhhhh
Q psy9583 360 PINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 360 ~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
++|+++|+||||++||+++++|+..
T Consensus 398 ~~m~lsls~DHRviDGa~aa~Fl~~ 422 (435)
T TIGR01349 398 SIMSVTLSCDHRVIDGAVGAEFLKS 422 (435)
T ss_pred eeEEEeEeecchhhCcHHHHHHHHH
Confidence 9999999999999999999988764
No 8
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=100.00 E-value=5.2e-78 Score=664.08 Aligned_cols=376 Identities=27% Similarity=0.479 Sum_probs=318.0
Q ss_pred EecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCcccc
Q psy9583 6 VKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDISKLS 85 (866)
Q Consensus 6 ~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~~~~ 85 (866)
|+||+||++|+||+|++|+|++||.|++||+|+++||||+.++++||.+|+|.++++++|+.|++|++|+.++.+.+...
T Consensus 1 ~~~P~lg~~~~eg~i~~w~v~~Gd~V~~g~~l~~vEtdK~~~ev~a~~~G~v~~i~v~~G~~v~vG~~l~~i~~~~~~~~ 80 (416)
T PLN02528 1 VPLAQTGEGIAECELLRWFVKEGDQVEEFQPLCEVQSDKATIEITSRYKGKVAQINFSPGDIVKVGETLLKIMVEDSQHL 80 (416)
T ss_pred CCCCCCCCCccEEEEEEEEeCCCCEECCCCEEEEEEeCceeEEEecCCCEEEEEEEeCCCCEeCCCCEEEEEeccCCccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999975432110
Q ss_pred ----c--ccc-c--ccc-c-c---ccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccccccc--
Q psy9583 86 ----S--KTE-I--KNK-K-D---IKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEE-- 149 (866)
Q Consensus 86 ----~--~~~-~--~~~-~-~---~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~~-- 149 (866)
+ +.. . .++ + . ......++||++|+||+++||||+.| +|||++|||+++||++|+...+....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gvdl~~v-~gtG~~GrI~~~DV~~~~~~~~~~~~~~~ 159 (416)
T PLN02528 81 RSDSLLLPTDSSNIVSLAESDERGSNLSGVLSTPAVRHLAKQYGIDLNDI-LGTGKDGRVLKEDVLKYAAQKGVVKDSSS 159 (416)
T ss_pred cccCCCCCCCCccCCCCCCCCccccccCCccCChHHHHHHHHhCCCHHHC-CCCCCCCcEeHHHHHHHhhcccccccccc
Confidence 0 000 0 000 0 0 00112468999999999999999999 899999999999999997532110000
Q ss_pred cccccCCCcc----cccccc-CCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccC
Q psy9583 150 KQEKYKPYLD----SISIKN-NSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNV 224 (866)
Q Consensus 150 ~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~ 224 (866)
.++...+..+ ..+.+. .....+.+||++|||+||++|++|+ ++||+|++.++|+++|+++|+++++.. +..|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ia~~m~~S~-~ip~~~~~~eid~~~l~~~r~~~~~~~-~~~g~ 237 (416)
T PLN02528 160 AEEATIAEQEEFSTSVSTPTEQSYEDKTIPLRGFQRAMVKTMTAAA-KVPHFHYVEEINVDALVELKASFQENN-TDPTV 237 (416)
T ss_pred cccccCCccccccccCCCcccccCcceeeccchHHHHHHHHHHhcC-cCCeEEEEEEEEhHHHHHHHHHHhhhh-hhcCC
Confidence 0000000000 000000 0111356899999999999999997 899999999999999999999998653 33489
Q ss_pred ccCHHHHHHHHHHHHHHhCCccceEEeCC--eeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy9583 225 KLGFMSFFVKAVVSALKQYPIINASVDGN--NIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQD 302 (866)
Q Consensus 225 ~~t~~~~~~ka~~~al~~~P~~n~~~~~~--~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~ 302 (866)
|+||++||+||+++||++||.+|++|+++ .+++++++||||||++++||++||||++|++|+.+|++++++|.+++|+
T Consensus 238 kls~~~~likA~a~aL~~~P~~Na~~~~~~~~i~~~~~vnIgiAv~~~~GL~vPvi~~a~~~sl~eI~~~~~~l~~~ar~ 317 (416)
T PLN02528 238 KHTFLPFLIKSLSMALSKYPLLNSCFNEETSEIRLKGSHNIGVAMATEHGLVVPNIKNVQSLSLLEITKELSRLQHLAAE 317 (416)
T ss_pred cccHHHHHHHHHHHHHHhCchhhEEEecCCceEEEeCCCCeEEEEeCCCCeEecccCCcccCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999865 7999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEe-CCeeEeeeeeeeeecccccccccchhhhh
Q psy9583 303 NKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVE-NNNVVIRPINYFALSYDHRIIDGREAVLS 381 (866)
Q Consensus 303 ~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~-~~~~~ir~~~~~~l~~dhr~~dg~~a~~~ 381 (866)
|+|+++|++||||||||+|++|+.+|+|||||||+||||+|++.++|++. +|++++|++|+++|+||||++||+++++|
T Consensus 318 gkL~~~dl~ggTftiSNlG~~G~~~~tpIin~pq~aIlgvG~i~~~pv~~~~g~i~~r~~m~lslt~DHRviDGa~aa~F 397 (416)
T PLN02528 318 NKLNPEDITGGTITLSNIGAIGGKFGSPVLNLPEVAIIALGRIQKVPRFVDDGNVYPASIMTVTIGADHRVLDGATVARF 397 (416)
T ss_pred CCCCHHHhCCceEEEeCCccccCCceECcccCCceEEEEcccceEEeEEeCCCcEEEEeEEEEeEeccchhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 58999999999999999999999999988
Q ss_pred hhh
Q psy9583 382 LMS 384 (866)
Q Consensus 382 ~~~ 384 (866)
+..
T Consensus 398 l~~ 400 (416)
T PLN02528 398 CNE 400 (416)
T ss_pred HHH
Confidence 764
No 9
>COG0508 AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion]
Probab=100.00 E-value=1.5e-78 Score=664.69 Aligned_cols=375 Identities=45% Similarity=0.763 Sum_probs=330.3
Q ss_pred ccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 2 ALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 2 ~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
|+++|+||+||++|+||+|++|+||+||+|++||+|+||||||+++||+||++|+|.+|++++|++|++|++|++|+.++
T Consensus 1 m~~ei~mP~lge~~~EG~I~~W~~k~GD~V~~gd~L~eVeTDKa~~EV~ap~~G~l~~i~~~~G~~V~Vg~~I~~i~~~~ 80 (404)
T COG0508 1 MAIEIKMPDLGETMTEGTIVEWLKKVGDKVKEGDVLVEVETDKATMEVPAPDAGVLAKILVEEGDTVPVGAVIARIEEEG 80 (404)
T ss_pred CCceEecCCCCCccceEEEEEEecCCCCeecCCCeeEEEEcCceeEEecCCCCeEEEEEeccCCCEEcCCCeEEEEecCC
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cc--ccccc--cc----cccccc-----cccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhcccccc
Q psy9583 82 SK--LSSKT--EI----KNKKDI-----KNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINE 148 (866)
Q Consensus 82 ~~--~~~~~--~~----~~~~~~-----~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~ 148 (866)
+. ..+.. ++ ++.++. +.....+||++|++|+|+|+|++.+ .|||++|||+++|+..++.......
T Consensus 81 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~~r~la~e~gidl~~v-~gtG~~gri~~~d~~~~~~~~~~~~- 158 (404)
T COG0508 81 ADAPAAAEAPPEPAAAAPASAPATAASAAAGRVLASPAVRRLAREAGIDLSKV-KGTGPGGRITKKDVEAAVAEKAAAA- 158 (404)
T ss_pred CcccccCcccCCccccCcCcccCccccccccccccCcchhhhhhhcCCCHHHc-CCcCCCCceeccchhhhcccccccc-
Confidence 43 11110 00 000000 1134679999999999999999999 6999999999999999876431100
Q ss_pred ccccccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCH
Q psy9583 149 EKQEKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGF 228 (866)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~ 228 (866)
. .+..............+++||+++||.|+++|..|++++||+|.+.++|++.++++|++++..+.++ +.|+||
T Consensus 159 ~-----~~~~~~~~~~~~~~~~~~~~~~~~rk~ia~~m~~s~~~~p~~t~~~evd~t~l~~lr~~~~~~~~~~-g~klt~ 232 (404)
T COG0508 159 A-----APAPAAAAPASAAGEEERVPMSRIRKAIAERMVESKQTIPHLTLFNEVDMTKLMALRKKLKEEFEKK-GVKLTF 232 (404)
T ss_pred c-----ccccccCCcccccCCceeeecccHHHHHHHHHHHHHhhCCeEEEEeeecHHHHHHHHHHhhhhhccc-CccccH
Confidence 0 0000000001123456889999999999999999999999999999999999999999999887755 999999
Q ss_pred HHHHHHHHHHHHHhCCccceEEeCC--eeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCC
Q psy9583 229 MSFFVKAVVSALKQYPIINASVDGN--NIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLL 306 (866)
Q Consensus 229 ~~~~~ka~~~al~~~P~~n~~~~~~--~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 306 (866)
++|++||++.||++||.+|++++++ .+++++++|||+||++++||++|||||++++|+.+|++++.+|..++|+|+|.
T Consensus 233 ~~f~~kA~~~Alk~~P~~Na~~~~~~~~iv~~~~~~igiAv~t~~GLvvpVir~a~~~~~~~i~~~i~~la~~aR~~kl~ 312 (404)
T COG0508 233 LSFLVKAVVKALKKFPEVNASIDGDGEEIVYHKYVNIGIAVDTPRGLVVPVIRDADKKSLAEIAKEIKDLAKKARDGKLT 312 (404)
T ss_pred HHHHHHHHHHHHHhCCccceeeccccceEEEeccccEEEEEecCCCeEecceeecccCCHHHHHHHHHHHHHHHHhcCcC
Confidence 9999999999999999999999875 89999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 307 PEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 307 ~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
++|++||||||||+|++|...|+|||||||+|||++|++.++|++.++++++|++|+++++||||++||.++.+|...
T Consensus 313 ~~e~~ggtftisn~G~~g~~~~tpiin~Pq~aILgv~~~~~rpv~~~~~i~~~~mm~lsls~DHRviDGa~aa~Fl~~ 390 (404)
T COG0508 313 PEEMQGGTFTISNLGMFGSLMFTPIINPPQVAILGVGAIEERPVVVGGEIVVRPMMYLSLSYDHRVIDGAEAARFLVA 390 (404)
T ss_pred HHHhCCceEEeecCCccccceecccccChhHheeeccccccCceEecCceeeEeeEeecccccccccccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988999999999999999999999999988764
No 10
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=100.00 E-value=2.1e-77 Score=682.50 Aligned_cols=379 Identities=28% Similarity=0.455 Sum_probs=321.9
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
+++|+||++|+ |+||+|++|+|++||.|++||+|++|||||++++|+||++|+|.++++++|+.|++|++|+.++.+++
T Consensus 116 ~~~~~~P~~g~-~~eg~i~~w~v~~Gd~V~~g~~l~~vetdK~~~ei~a~~~G~v~~i~v~~G~~v~vG~~l~~i~~~~~ 194 (546)
T TIGR01348 116 VQEVTVPDIGD-IEKVTVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASGVVKSVKVKVGDSVPTGDLILTLSVAGS 194 (546)
T ss_pred ceEEeCCCCCC-cceeEEeEEeeCCCCcccCCCeeEEEEecceeeEecCCCCcEEEEEecCCCCEecCCCEEEEEecCCC
Confidence 36899999999 99999999999999999999999999999999999999999999999999999999999999975331
Q ss_pred cc-----c-cc----ccccc-------cc------ccc--------cccc-ccchhHHHhhhhCCCCcccccCCCCCCCc
Q psy9583 83 KL-----S-SK----TEIKN-------KK------DIK--------NLNT-IVMPSAKKILSDNNLEISKINNGTGKDGR 130 (866)
Q Consensus 83 ~~-----~-~~----~~~~~-------~~------~~~--------~~~~-~~~p~~r~~a~~~~~d~~~v~~gtg~~g~ 130 (866)
.. . ++ ..+++ .+ ... ..+. ++||+||+||+|+||||+.| .||||+||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gvdl~~v-~gtG~~Gr 273 (546)
T TIGR01348 195 TPATAPAPASAQPAAQSPAATQPEPAAAPAAAKAQAPAPQQAGTQNPAKVDHAAPAVRRLAREFGVDLSAV-KGTGIKGR 273 (546)
T ss_pred CcccccCcccccccCCCCccccccccCCCCCCCccCcccccccccccccccCCCHHHHHHHHHcCCCHhhC-CCCCCCCe
Confidence 10 0 00 00000 00 000 0122 58999999999999999999 89999999
Q ss_pred eeehhHHhhhhhccc-cccccccccCC--Ccccccccc--CCCccccccCchhHHHHHHHHHHhccccceEEEEeeeech
Q psy9583 131 IIKEDVLKVLSSIKN-INEEKQEKYKP--YLDSISIKN--NSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQ 205 (866)
Q Consensus 131 i~~~Dv~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t 205 (866)
|+++||++|+..... .+..+.+...+ .....+... ....++.+||++|||.||++|++|++++||||++.++|+|
T Consensus 274 I~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~rk~ia~~m~~S~~~iPh~~~~~evdvt 353 (546)
T TIGR01348 274 ILREDVQRFVKEPSVRAQAAAASAAGGAPGALPWPNVDFSKFGEVEEVDMSRIRKISGANLTRNWTMIPHVTHFDKADIT 353 (546)
T ss_pred EeHHHHHHHhhccccccCcccccccCCccccCCCccccccccCcceeeecchHHHHHHHHHHHHhhcCCEEEEEEEEEcH
Confidence 999999999743211 11000000000 000000000 0012356899999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeC--CeeEEccceeEEEEEecCCceEEeEEecCCC
Q psy9583 206 SIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDG--NNIIYHKYYDIGIAISSSRGLVVPILRNADT 283 (866)
Q Consensus 206 ~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~--~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~ 283 (866)
+|+++|+++++.+.+ .|.|+||++||+||+++||++||.+|++|++ +.+++++++||||||++++||+||||||+|+
T Consensus 354 ~l~~~r~~l~~~~~~-~g~kls~~~~l~kA~~~AL~~~P~~Na~~~~~~~~i~~~~~vnigvAv~~~~GL~vPvi~~a~~ 432 (546)
T TIGR01348 354 EMEAFRKQQNAAVEK-EGVKLTVLHILMKAVAAALKKFPKFNASLDLGGEQLILKKYVNIGVAVDTPNGLLVPVIKDVDR 432 (546)
T ss_pred HHHHHHHHHHhhhhh-cCCcccHHHHHHHHHHHHHHhCChhhEEEeCCCCEEEEeCCcCEEEEEECCCCeEECCcCCccc
Confidence 999999999976554 4899999999999999999999999999984 5799999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeee
Q psy9583 284 MSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINY 363 (866)
Q Consensus 284 ~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~ 363 (866)
||+.+|++++++|.+++|+|+|+++||+||||||||+||+|+.+|+|||||||+|||++|++.++|++.++++++|++|+
T Consensus 433 ~sl~~ia~~~~~l~~~ar~g~L~~~d~~ggTfTiSNlG~~G~~~~~piin~Pq~aIl~vg~~~~~p~~~~~~~~~~~~m~ 512 (546)
T TIGR01348 433 KGITELALELSDLAKKARDGKLTPDEMQGACFTISSLGGIGGTAFTPIVNAPEVAILGVSKSGMEPVWNGKEFEPRLMLP 512 (546)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCHHHhCCCeEEEeCCCCCCCcceECCCCCCceEEEEcccceEEeEEECCEEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred eeecccccccccchhhhhhhh
Q psy9583 364 FALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 364 ~~l~~dhr~~dg~~a~~~~~~ 384 (866)
++|+||||++||.++++|+..
T Consensus 513 ltls~DHRviDGa~aa~Fl~~ 533 (546)
T TIGR01348 513 LSLSYDHRVIDGADAARFTTY 533 (546)
T ss_pred EeEeccchhcChHHHHHHHHH
Confidence 999999999999999988764
No 11
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=2.1e-72 Score=643.45 Aligned_cols=462 Identities=38% Similarity=0.652 Sum_probs=418.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+.+|||+||||||||+.||.+|++.|++|+|||+. +.+||+|+|.||+|+|.++..+..++.... +..+|+.
T Consensus 1 ~~~~~DvvVIG~GpaG~~aA~~aa~~G~~V~lie~~------~~~GG~c~n~gciP~K~l~~~a~~~~~~~~-~~~~g~~ 73 (471)
T PRK06467 1 MEIKTQVVVLGAGPAGYSAAFRAADLGLETVCVERY------STLGGVCLNVGCIPSKALLHVAKVIEEAKA-LAEHGIV 73 (471)
T ss_pred CCccceEEEECCCHHHHHHHHHHHHCCCcEEEEecC------CcccccccCCCcccHHHHHHHHHHHHHHhh-hhhcCcc
Confidence 455799999999999999999999999999999986 579999999999999999998888877654 6677887
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKA 544 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p 544 (866)
.....++|..+..+.+..++++...+..++++.||+++.+++.+.+. +++.+...++ .++.||+||||||++|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~a~~~~~-----~~v~v~~~~g~~~~~~~d~lViATGs~p 148 (471)
T PRK06467 74 FGEPKIDIDKMRARKEKVVKQLTGGLAGMAKGRKVTVVNGLGKFTGG-----NTLEVTGEDGKTTVIEFDNAIIAAGSRP 148 (471)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CEEEEecCCCceEEEEcCEEEEeCCCCC
Confidence 76678899999999999999888888889999999999999998876 7888876555 5799999999999999
Q ss_pred cCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHc
Q psy9583 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~ 624 (866)
+.+|+.+.....++++.+.+.+...+++++|||||++|+|+|..|.++|.+|+++++.+++++.+|+++...+++.|+++
T Consensus 149 ~~~p~~~~~~~~v~~~~~~~~~~~~~~~vvIiGgG~iG~E~A~~l~~~G~~Vtlv~~~~~il~~~d~~~~~~~~~~l~~~ 228 (471)
T PRK06467 149 IQLPFIPHDDPRIWDSTDALELKEVPKRLLVMGGGIIGLEMGTVYHRLGSEVDVVEMFDQVIPAADKDIVKVFTKRIKKQ 228 (471)
T ss_pred CCCCCCCCCCCcEEChHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEecCCCCCCcCCHHHHHHHHHHHhhc
Confidence 86666554556688888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
+++++++.+++++.+++++.+.+...++. ..++++|.|++|+|++||++++.++.+|++++++|+|.||++|||+
T Consensus 229 -v~i~~~~~v~~i~~~~~~~~v~~~~~~~~----~~~i~~D~vi~a~G~~pn~~~l~~~~~gl~~~~~G~I~Vd~~~~t~ 303 (471)
T PRK06467 229 -FNIMLETKVTAVEAKEDGIYVTMEGKKAP----AEPQRYDAVLVAVGRVPNGKLLDAEKAGVEVDERGFIRVDKQCRTN 303 (471)
T ss_pred -eEEEcCCEEEEEEEcCCEEEEEEEeCCCc----ceEEEeCEEEEeecccccCCccChhhcCceECCCCcEeeCCCcccC
Confidence 99999999999987766766666533231 2479999999999999999987788899999999999999999999
Q ss_pred CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 705 ~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
+|+|||+|||++.+++++.|.+||++||+||++....+++...|+++|++|+++++|+||+||++.|+++.+..+++...
T Consensus 304 ~p~VyAiGDv~~~~~la~~A~~eG~~aa~~i~g~~~~~~~~~~p~~~~~~p~ia~vGlte~ea~~~g~~~~~~~~~~~~~ 383 (471)
T PRK06467 304 VPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEEGIEYETATFPWAAS 383 (471)
T ss_pred CCCEEEehhhcCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceeEEECCHHHHHhcCCCeEEEEEecCcc
Confidence 99999999999989999999999999999999987778888999999999999999999999999999999999999988
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhcc
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSI 864 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 864 (866)
+++.+.+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++...++.+
T Consensus 384 ~~~~~~~~~~g~~kli~d~~t~~ilG~~~vg~~a~e~i~~~a~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~~~~~ 463 (471)
T PRK06467 384 GRAIASDCADGMTKLIFDKETHRVLGGAIVGTNAGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEAFEGSIT 463 (471)
T ss_pred hhhhhCCCCceEEEEEEECCCCeEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHhhcCCcc
Confidence 89888888899999999999999999999999999999999999999999999999999999999999999987766544
Q ss_pred C
Q psy9583 865 N 865 (866)
Q Consensus 865 ~ 865 (866)
|
T Consensus 464 ~ 464 (471)
T PRK06467 464 D 464 (471)
T ss_pred c
Confidence 3
No 12
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=100.00 E-value=2e-74 Score=627.89 Aligned_cols=357 Identities=43% Similarity=0.700 Sum_probs=294.4
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCcc
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDISK 83 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~~ 83 (866)
++|+||+||++|+||+|++|+|++||.|++||+||+|||||+++||+||++|+|.++++++||.|++|++|++|+.+++.
T Consensus 92 ~~i~mP~lg~~~~eG~I~~w~v~~GD~V~~Gq~L~~VEtdK~~~eI~Ap~~G~v~~ilv~eGd~V~vG~~L~~I~~~~~~ 171 (463)
T PLN02226 92 VEAVVPHMGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVKEGDTVEPGTKVAIISKSEDA 171 (463)
T ss_pred eEEecCCCCCCcceEEEEEEEeCCCCEecCCCEEEEEEecceeeEEecCCCeEEEEEEeCCCCEecCCCEEEEeccCCcc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999754322
Q ss_pred ccccccccccccccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccccccccccccCCCcccccc
Q psy9583 84 LSSKTEIKNKKDIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEEKQEKYKPYLDSISI 163 (866)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (866)
.+........+..... ....+..|++ +++++++.+ .- . ........ .+. .+...+ +.
T Consensus 172 ~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~v~asp~-~r---~-----------~~~~~~~~---~~~-~~~~~~-~~ 228 (463)
T PLN02226 172 ASQVTPSQKIPETTDP-KPSPPAEDKQ--KPKVESAPV-AE---K-----------PKAPSSPP---PPK-QSAKEP-QL 228 (463)
T ss_pred ccccCccCCCCCCCCC-CCCCcccccc--ccCCCcchh-hc---c-----------ccCCCCCC---CCc-ccccCc-cc
Confidence 1110000000000000 0001111222 445665554 10 0 00000000 000 000000 00
Q ss_pred ccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhC
Q psy9583 164 KNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQY 243 (866)
Q Consensus 164 ~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~ 243 (866)
......+.+||++|||+||++|++||+++||||++.|+|+|+|+++|+++++.+.++.|.|+|+++||+||+++||++|
T Consensus 229 -~~~~~~~~ipls~~Rk~IA~~M~~S~~tiPh~t~~~evDvt~L~~lR~~l~~~~~~~~g~klS~~~~liKAva~AL~~~ 307 (463)
T PLN02226 229 -PPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQHQ 307 (463)
T ss_pred -ccCCCceeeeChHHHHHHHHHHHHHHhcCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhC
Confidence 0011235689999999999999999999999999999999999999999998776667899999999999999999999
Q ss_pred CccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCc
Q psy9583 244 PIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVF 323 (866)
Q Consensus 244 P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~ 323 (866)
|++|++|+++.+++++++||||||++++||+||||||+|++|+.||++++++|++++|+|+|+++|++||||||||+|++
T Consensus 308 P~lNa~~~~~~i~~~~~vnIGvAV~t~~GLvVPVIr~ad~~sl~eIa~ei~~L~~kAR~gkL~~~dl~GGTfTISNlG~~ 387 (463)
T PLN02226 308 PVVNAVIDGDDIIYRDYVDISIAVGTSKGLVVPVIRGADKMNFAEIEKTINGLAKKANEGTISIDEMAGGSFTVSNGGVY 387 (463)
T ss_pred CHhheEEcCCEEEEeCcccEEEEEECCCCEEeccCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCCeEEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 324 GSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 324 g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+++|||||||||+||||+|++.++|++.+|++++|++|+++|+||||++||+++++|+..
T Consensus 388 Gv~~ftPIInpPqvAILgvG~i~~~pvv~~g~i~~r~~m~lsLs~DHRVIDGa~aA~FL~~ 448 (463)
T PLN02226 388 GSLISTPIINPPQSAILGMHSIVSRPMVVGGSVVPRPMMYVALTYDHRLIDGREAVYFLRR 448 (463)
T ss_pred cccceeccccCCcEEEEEcccceEEEEEECCEEEEEeEEEEeEecchhhhCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988764
No 13
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=100.00 E-value=5.3e-74 Score=622.11 Aligned_cols=356 Identities=45% Similarity=0.727 Sum_probs=301.9
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
+++|+||+||++|+||+|++|+|++||.|++||+|++|||||++++|+||.+|+|.++++++|+.|++|++|+.|+..++
T Consensus 44 i~~i~~P~lg~~~~eg~I~~w~v~~Gd~V~~Gd~L~~vEtdK~~~ei~Ap~~G~v~~i~v~~G~~V~~G~~L~~I~~~~~ 123 (418)
T PTZ00144 44 IKVIKVPTMGDSISEGTVVEWKKKVGDYVKEDEVICIIETDKVSVDIRAPASGVITKIFAEEGDTVEVGAPLSEIDTGGA 123 (418)
T ss_pred ceEEecCCCCCCcceEEEEEEEeCCCCEeCCCCEEEEEEEcceEEEEecCCCeEEEEEEeCCCCEecCCCEEEEEcCCCc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999976543
Q ss_pred cccccc--ccc-ccc-cccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccccccccccccCCCc
Q psy9583 83 KLSSKT--EIK-NKK-DIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEEKQEKYKPYL 158 (866)
Q Consensus 83 ~~~~~~--~~~-~~~-~~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~~~~~~~~~~~ 158 (866)
...++. +.+ .++ +.+.......|.+++++.+.++++..+ ... .. .+.+ + ..+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~a~p~v-r~~---------------~~---~~~~-~--~~~~- 180 (418)
T PTZ00144 124 PPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAA-KPP---------------EP---APAA-K--PPPT- 180 (418)
T ss_pred cccccccccCCCCCccCCCCCCCCCCCccccccccccCCchhh-hcc---------------cc---CCCC-C--CCCC-
Confidence 211100 000 000 000111123477777777777766655 210 00 0000 0 0000
Q ss_pred cccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHH
Q psy9583 159 DSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVS 238 (866)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~ 238 (866)
+.+. .....+.+|+++|||+||++|++|++++||+|++.++|+|+|+++|+++++.+.++.|.|+|+++||+||+++
T Consensus 181 -~~~~--~~~~~~~ipls~~Rk~IA~~M~~S~~~iPh~t~~~eid~t~l~~~r~~~~~~~~~~~g~klS~~~~liKAva~ 257 (418)
T PTZ00144 181 -PVAR--ADPRETRVPMSRMRQRIAERLKASQNTCAMLTTFNECDMSALMELRKEYKDDFQKKHGVKLGFMSAFVKASTI 257 (418)
T ss_pred -Cccc--cCCCceeeeCcHHHHHHHHHHHHHHhhCCeEEEEEEEechHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHH
Confidence 0000 0011345899999999999999999999999999999999999999999987766668999999999999999
Q ss_pred HHHhCCccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEE
Q psy9583 239 ALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTIS 318 (866)
Q Consensus 239 al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tis 318 (866)
||++||.+|++|+++++++++++||||||++++||+|||||++|++|+.||++++++|++++|+|+|.++|++|||||||
T Consensus 258 AL~~~P~~Na~~~~~~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~ei~~L~~~ar~g~L~~~e~~GgTfTIS 337 (418)
T PTZ00144 258 ALKKMPIVNAYIDGDEIVYRNYVDISVAVATPTGLVVPVIRNCENKSFAEIEKELADLAEKARNNKLTLEDMTGGTFTIS 337 (418)
T ss_pred HHHhChHhheEEcCCEEEEecCCCEEEEEECCCCEEEccCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 319 NGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 319 n~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+|++|+++|||||||||+||||+|++.++|++.+|++++|++|+++|+||||++||+++++|+..
T Consensus 338 NlG~~G~~~~tpIInpPq~aILgvG~i~~~pvv~~g~i~~r~~m~lsLs~DHRviDGa~AA~FL~~ 403 (418)
T PTZ00144 338 NGGVFGSLMGTPIINPPQSAILGMHAIKKRPVVVGNEIVIRPIMYLALTYDHRLIDGRDAVTFLKK 403 (418)
T ss_pred CCCCCCcceeeeeecCCceEEEecccceeEeEEECCEEEEEeEEEEEEecchhhhChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988764
No 14
>KOG0557|consensus
Probab=100.00 E-value=1.9e-74 Score=604.17 Aligned_cols=379 Identities=33% Similarity=0.485 Sum_probs=324.1
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCC-CEEecCCEEEEEecCC
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDG-SIVTSNQVIALIDTDI 81 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g-~~v~~g~~l~~~~~~~ 81 (866)
..+|.||.|+++|+||+|++|.++|||.+++||+||||||||++++++++++|+|.||++++| ..|+||.+||++.+++
T Consensus 38 h~~i~MPALSPTMeeGnIvsW~kKeGdkls~GDvl~EVETDKAtmd~E~~ddGyLAKILi~EGskdvpVGk~Iaiive~e 117 (470)
T KOG0557|consen 38 HKTFSMPALSPTMEEGNIVSWKKKEGDKLSAGDVLLEVETDKATMDVEAQDDGYLAKILIEEGSKDVPVGKPIAIIVEDE 117 (470)
T ss_pred ceEeecCCCCccccCCceeeEeeccCCccCCCceEEEEecccceeeeeeccCCeeeeeeeccCcccccCCCceEEEeccc
Confidence 467999999999999999999999999999999999999999999999999999999999999 6899999999997654
Q ss_pred cccc---------c---------cccccc-----cc-----------ccc---ccccccchhHHHhhhhCCCCcccccCC
Q psy9583 82 SKLS---------S---------KTEIKN-----KK-----------DIK---NLNTIVMPSAKKILSDNNLEISKINNG 124 (866)
Q Consensus 82 ~~~~---------~---------~~~~~~-----~~-----------~~~---~~~~~~~p~~r~~a~~~~~d~~~v~~g 124 (866)
+..+ + ++++++ ++ +.+ +.++.+||.||+||.++++|++.| .|
T Consensus 118 ~di~~~k~~k~~~s~~~~~~~~~~~~app~~~~~~~Ps~~~~~~~~~p~~~~~~~r~~asP~Ak~la~e~~l~ls~i-~g 196 (470)
T KOG0557|consen 118 DDIAAFKLPKDEASSGEQSPSAAPPPAPPKVAKPEAPSAPSKPSTSQPVKAKNGGRVFASPLAKKLAEEKGLELSSI-PG 196 (470)
T ss_pred ccHHHhhccccccccccCCcccCCCCCCCcccccCCCCCCccccccccCCcCCCCceecChHHHHHHHHhCCccccC-cC
Confidence 3210 0 000000 00 001 125678999999999999999999 89
Q ss_pred CCCCCceeehhHHhhhhhccccccccccccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeec
Q psy9583 125 TGKDGRIIKEDVLKVLSSIKNINEEKQEKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINM 204 (866)
Q Consensus 125 tg~~g~i~~~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~ 204 (866)
|||+|||++.||++|++..+.....++.+..+...++.........+.+|++.||+.|+++|.+|++++||+|+..++++
T Consensus 197 tGP~Gri~k~Di~~~v~~~~~k~~~~~~~~~~~~~~~a~~~~~~~~~diP~s~mr~viakrl~eSk~~IPh~yvt~~~~~ 276 (470)
T KOG0557|consen 197 TGPHGRILKGDIEKHVGSGKKKSAKAPKASAPPPAPAAPPVSLPGYEDIPVSNMRRVIAKRLLESKQTIPHYYVTVDVNL 276 (470)
T ss_pred cCCCceeehhhHHHhhcccccccccCCCccCCCcCccCCcCCCCcccccccchhhhhhhhhhhhhhcCCCeEEEeeeeeh
Confidence 99999999999999987533211111111111101101111122378999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeC-CeeEEccceeEEEEEecCCceEEeEEecCCC
Q psy9583 205 QSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDG-NNIIYHKYYDIGIAISSSRGLVVPILRNADT 283 (866)
Q Consensus 205 t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~-~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~ 283 (866)
+.++++|++++ + .+.+.++|+++||+||++.||+++|++|++|.+ +.|.++++|||++||++++||++|+|+|++.
T Consensus 277 d~ll~~r~~ln--~-~~~~~~vsvndliiKAaa~al~~vPevNs~w~~~~~i~~~~~VdisvAVat~~GLitPii~na~~ 353 (470)
T KOG0557|consen 277 DKLLALREKLN--F-EKSIKKVSLNDLIAKAAALALAKVPEVNSSWMDELVIRQLSSVDISVAVATPNGLITPIIQNADA 353 (470)
T ss_pred HHHHHHHHHhh--h-cccCcccchhHHHHHHHHHHHhcCCcccceecCCccccccCcCChhheeeccCcccchhhhhccc
Confidence 99999999998 2 345789999999999999999999999999988 7899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEE---eCCeeEeee
Q psy9583 284 MSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIV---ENNNVVIRP 360 (866)
Q Consensus 284 ~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~---~~~~~~ir~ 360 (866)
+.+.+|.+++.+|..++|.++|.|+|++||||||||+||||++.|+.||||||.|||++|+.....+. .++++....
T Consensus 354 kgl~~is~~vkel~~kAr~~kL~Pee~qgGtftiSNLGmf~V~~F~AiinPpq~~ILavg~~~~~~v~d~~~~~~~~~~~ 433 (470)
T KOG0557|consen 354 KGLSTISSKVKELAQKAREGKLQPEEFQGGTFTLSNLGMFGVDMFTAIINPPQADILAVGAATPSVVPDANGPEKFSVIN 433 (470)
T ss_pred ccHHHHHHHHHHHHHHHhhccCCcccccCCceeHhhccCcCccccccccCCchhhhhhcccCccccccCCCcccccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999988774 346788899
Q ss_pred eeeeeecccccccccchhhhhhhhh
Q psy9583 361 INYFALSYDHRIIDGREAVLSLMSF 385 (866)
Q Consensus 361 ~~~~~l~~dhr~~dg~~a~~~~~~~ 385 (866)
.|.+++++|||++||+.+++|+..+
T Consensus 434 ~m~VTls~DhRvvdga~aa~Fl~~f 458 (470)
T KOG0557|consen 434 AMTVTLSADHRVVDGAVAARFLDEF 458 (470)
T ss_pred eeEEEEecCcceecHHHHHHHHHHH
Confidence 9999999999999999999988765
No 15
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=100.00 E-value=7.8e-73 Score=657.96 Aligned_cols=379 Identities=27% Similarity=0.424 Sum_probs=320.4
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
+++|+||+|| |+||+|++|+|++||.|++||+|++|||||++++|+||++|+|.++++++|+.|++|++|+.++.+++
T Consensus 206 ~~~~~~p~lg--~~eg~v~~w~v~~Gd~V~~g~~l~~vetdK~~~~i~ap~~G~l~~i~~~~G~~v~~G~~l~~i~~~~~ 283 (633)
T PRK11854 206 VKDVNVPDIG--GDEVEVTEVMVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVKTGSLIMRFEVEGA 283 (633)
T ss_pred ceEEecCCCc--ccceEEEEEEecCCCeecCCCceEEEEecceeeEeeCCCCeEEEEEecCCCCEecCCCEEEEEecCCC
Confidence 4789999999 99999999999999999999999999999999999999999999999999999999999999975432
Q ss_pred cc---c----cccc-c---c---cc-cc-----c------cccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhH
Q psy9583 83 KL---S----SKTE-I---K---NK-KD-----I------KNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136 (866)
Q Consensus 83 ~~---~----~~~~-~---~---~~-~~-----~------~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv 136 (866)
.. + ++.+ + . +. .+ . ...+.++||+||+||+++||||+.| +||||+|||+++||
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gidl~~v-~gtG~~GrI~~~DV 362 (633)
T PRK11854 284 APAAAPAKQEAAAPAPAAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLVRRLAREFGVNLAKV-KGTGRKGRILKEDV 362 (633)
T ss_pred CccccccccCCCCCCccccccCCCCCCCcccccccccccccCCccCCCchhHHHHHHhCCChhhc-CCCCCCCeEeHHHH
Confidence 11 0 0000 0 0 00 00 0 0112458999999999999999999 89999999999999
Q ss_pred Hhhhhhccccccccccc-cCC----CccccccccC--CCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHH
Q psy9583 137 LKVLSSIKNINEEKQEK-YKP----YLDSISIKNN--SRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIID 209 (866)
Q Consensus 137 ~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~--~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~ 209 (866)
++|+..........+.. +.+ .....+..+. ....+.+||++|||.||++|++||+++||++++.++|+|+|++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ia~~m~~S~~~ip~~~~~~evD~t~l~~ 442 (633)
T PRK11854 363 QAYVKDAVKRAEAAPAAAAAGGGGPGLLPWPKVDFSKFGEIEEVELGRIQKISGANLHRNWVMIPHVTQFDKADITELEA 442 (633)
T ss_pred HHHhhccccccccCCcccccccccccccccccccccccCcceEEeCchHHHHHHHHHHHHHhcCCeEEEEeEEEcHHHHH
Confidence 99975321100000000 000 0000000000 0123568999999999999999999999999999999999999
Q ss_pred HHHHhhhHHH-hhccCccCHHHHHHHHHHHHHHhCCccceEEe--CCeeEEccceeEEEEEecCCceEEeEEecCCCCCH
Q psy9583 210 LRLKYKDKFE-KEHNVKLGFMSFFVKAVVSALKQYPIINASVD--GNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSI 286 (866)
Q Consensus 210 ~r~~~~~~~~-~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~--~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~ 286 (866)
+|+++++... ++.|.++|+++||+||+++||++||+||++|+ ++++++++++||||||++++||++||||+++++|+
T Consensus 443 ~rk~~~~~~~~~~~g~k~t~~~~likAva~Al~~~P~~Na~~~~~~~~i~~~~~vnigiAV~~~~GL~vPvi~~a~~~sl 522 (633)
T PRK11854 443 FRKQQNAEAEKRKLGVKITPLVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYVNIGIAVDTPNGLVVPVFKDVNKKGI 522 (633)
T ss_pred HHHHHhhhhhhhcccCcccHHHHHHHHHHHHHHhCCHhhEEEecCCCEEEEecccCEEEEEECCCceEEeeECCCccCCH
Confidence 9999885432 34589999999999999999999999999996 56899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeee
Q psy9583 287 ADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFAL 366 (866)
Q Consensus 287 ~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l 366 (866)
.+|+++++++.+++|+|+|.++|++||||||||+||+|+++|+|||||||+|||++|++.++|++.++.+++|++|+++|
T Consensus 523 ~~i~~~~~~l~~~ar~~~l~~~~~~ggTftISnlG~~G~~~~tpii~ppq~aIlgvG~i~~~p~~~~~~~~~r~~m~lsl 602 (633)
T PRK11854 523 IELSRELMDISKKARDGKLTAGDMQGGCFTISSIGGLGTTHFTPIVNAPEVAILGVSKSAMEPVWNGKEFAPRLMLPLSL 602 (633)
T ss_pred HHHHHHHHHHHHHHHcCCCChHHcCCcEEEEeCCcccCCcceeccccCCceEEEEcccceEEEEEECCEEEEEEEEEEeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred cccccccccchhhhhhhh
Q psy9583 367 SYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 367 ~~dhr~~dg~~a~~~~~~ 384 (866)
+||||++||.++++|+..
T Consensus 603 t~DHRviDGa~aa~Fl~~ 620 (633)
T PRK11854 603 SYDHRVIDGADGARFITI 620 (633)
T ss_pred EccchhcchHHHHHHHHH
Confidence 999999999999988764
No 16
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=9.8e-71 Score=629.40 Aligned_cols=456 Identities=44% Similarity=0.774 Sum_probs=408.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhh-hhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKN-SFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~-~~~~~gi~~~ 468 (866)
+|||+||||||||++||.++++.|++|+|||+. ..+||+|+|.||+|+|.++.....++.... ....+|+..
T Consensus 3 ~~DvvVIG~GpaG~~AA~~aa~~G~~V~liE~~------~~~GG~c~~~gciPsK~l~~~~~~~~~~~~~~~~~~gi~~- 75 (466)
T PRK06115 3 SYDVVIIGGGPGGYNAAIRAGQLGLKVACVEGR------STLGGTCLNVGCMPSKALLHASELYEAASGGEFAHLGIEV- 75 (466)
T ss_pred cccEEEECCCHHHHHHHHHHHhCCCeEEEEecC------CceeeeeccCcccccHHHHHHhHHHHHHhhhhhhhcCccc-
Confidence 499999999999999999999999999999975 579999999999999999998888765543 245667754
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~ 546 (866)
....+|.++..+.+..+..+...+..++++.+|+++.|+..+.+. +++.+...++ ..+.||+||||||++|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~-----~~v~v~~~~g~~~~~~~d~lVIATGs~p~~ 150 (466)
T PRK06115 76 KPTLNLAQMMKQKDESVEALTKGVEFLFRKNKVDWIKGWGRLDGV-----GKVVVKAEDGSETQLEAKDIVIATGSEPTP 150 (466)
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CEEEEEcCCCceEEEEeCEEEEeCCCCCCC
Confidence 357899999999999998888888889999999999999877765 6777765444 479999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
+|+...++..++++.+++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++...+++.|++.||
T Consensus 151 ipg~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~ig~E~A~~l~~~G~~Vtlie~~~~il~~~d~~~~~~l~~~l~~~gV 230 (466)
T PRK06115 151 LPGVTIDNQRIIDSTGALSLPEVPKHLVVIGAGVIGLELGSVWRRLGAQVTVVEYLDRICPGTDTETAKTLQKALTKQGM 230 (466)
T ss_pred CCCCCCCCCeEECHHHHhCCccCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 77765566678888888877778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
++++++++++++.+++++.+.+... +|. ...+++|.|++|+|++||++.+.++..+++++++| +.||+++||++
T Consensus 231 ~i~~~~~V~~i~~~~~~v~v~~~~~~~g~----~~~i~~D~vi~a~G~~pn~~~l~~~~~g~~~~~~G-~~vd~~~~Ts~ 305 (466)
T PRK06115 231 KFKLGSKVTGATAGADGVSLTLEPAAGGA----AETLQADYVLVAIGRRPYTQGLGLETVGLETDKRG-MLANDHHRTSV 305 (466)
T ss_pred EEEECcEEEEEEEcCCeEEEEEEEcCCCc----eeEEEeCEEEEccCCccccccCCcccccceeCCCC-EEECCCeecCC
Confidence 9999999999987666666655421 221 24799999999999999999877888899998777 78999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|+|||+|||++.+++++.|.+||++||+||++.....++..+|+++|++|++++||+||+||++.|+++.+..+++....
T Consensus 306 ~~IyA~GD~~~~~~la~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~t~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~ 385 (466)
T PRK06115 306 PGVWVIGDVTSGPMLAHKAEDEAVACIERIAGKAGEVNYGLIPGVIYTRPEVATVGKTEEQLKAEGRAYKVGKFPFTANS 385 (466)
T ss_pred CCEEEeeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCcccEEeeCCHHHHHHCCCCEEEEEEecccCh
Confidence 99999999999999999999999999999998766678889999999999999999999999999999999999999999
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhh
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENR 862 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~ 862 (866)
++.+.+++.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|.+.++++.+.+.
T Consensus 386 ~~~~~~~~~g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~dl~~~~~~hPt~~e~~~~a~~~~~~~ 462 (466)
T PRK06115 386 RAKINHETEGFAKILADARTDEVLGVHMVGPSVSEMIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVEGW 462 (466)
T ss_pred hhHhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhCccCCCChHHHHHHHHHHHhcc
Confidence 99988888999999999999999999999999999999999999999999999999999999999999999887654
No 17
>PRK06370 mercuric reductase; Validated
Probab=100.00 E-value=9.2e-70 Score=623.14 Aligned_cols=453 Identities=31% Similarity=0.529 Sum_probs=407.4
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+.+|||+||||||||++||.+|+++|++|+|||+. .+||+|.|.||+|+|.++..++..+.... ...+|+.
T Consensus 2 ~~~~~DvvVIG~GpaG~~aA~~aa~~G~~v~lie~~-------~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~ 73 (463)
T PRK06370 2 PAQRYDAIVIGAGQAGPPLAARAAGLGMKVALIERG-------LLGGTCVNTGCVPTKTLIASARAAHLARR-AAEYGVS 73 (463)
T ss_pred CCccccEEEECCCHHHHHHHHHHHhCCCeEEEEecC-------ccCCceeccccCcHHHHHHHHHHHHHHHH-HHhcCcc
Confidence 555799999999999999999999999999999984 79999999999999999999988877665 5567776
Q ss_pred cc-ccccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 467 TQ-NVTLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 467 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
.. ...++|..+..+.+....++...+..++++. ||+++.++.++.+. +++.+ ++.++.||+||||||+.|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~g~~~~~~~-----~~v~v---~~~~~~~d~lViATGs~p 145 (463)
T PRK06370 74 VGGPVSVDFKAVMARKRRIRARSRHGSEQWLRGLEGVDVFRGHARFESP-----NTVRV---GGETLRAKRIFINTGARA 145 (463)
T ss_pred cCccCccCHHHHHHHHHHHHHHHHHhHHHHHhcCCCcEEEEEEEEEccC-----CEEEE---CcEEEEeCEEEEcCCCCC
Confidence 43 3578999999999988888777788888887 99999999988765 67777 356799999999999999
Q ss_pred cCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHc
Q psy9583 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~ 624 (866)
+.|+.++.+...++++.+.+.....+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.
T Consensus 146 ~~p~i~G~~~~~~~~~~~~~~~~~~~~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~ 225 (463)
T PRK06370 146 AIPPIPGLDEVGYLTNETIFSLDELPEHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGPRLLPREDEDVAAAVREILERE 225 (463)
T ss_pred CCCCCCCCCcCceEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCCCcccCHHHHHHHHHHHHhC
Confidence 98776666666788888888777789999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
||++++++++.+++.++++..+.+...++ ..++++|.|++|+|++||++.|.+++.|++++++|+|.||++|||+
T Consensus 226 GV~i~~~~~V~~i~~~~~~~~v~~~~~~~-----~~~i~~D~Vi~A~G~~pn~~~l~l~~~g~~~~~~G~i~vd~~l~t~ 300 (463)
T PRK06370 226 GIDVRLNAECIRVERDGDGIAVGLDCNGG-----APEITGSHILVAVGRVPNTDDLGLEAAGVETDARGYIKVDDQLRTT 300 (463)
T ss_pred CCEEEeCCEEEEEEEcCCEEEEEEEeCCC-----ceEEEeCEEEECcCCCcCCCCcCchhhCceECCCCcEeECcCCcCC
Confidence 99999999999998876665555542222 1379999999999999999966678889999999999999999999
Q ss_pred CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC-CCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCC
Q psy9583 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLA 783 (866)
Q Consensus 705 ~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~ 783 (866)
+|+|||+|||++.+++.+.|.+||++||+||++. ...+++..+|+++|++|+++++|+||+||++.|+++.+..+++..
T Consensus 301 ~~~IyAiGD~~~~~~~~~~A~~~g~~aa~ni~~~~~~~~~~~~~p~~~~~~p~ia~vG~te~~a~~~g~~~~~~~~~~~~ 380 (463)
T PRK06370 301 NPGIYAAGDCNGRGAFTHTAYNDARIVAANLLDGGRRKVSDRIVPYATYTDPPLARVGMTEAEARKSGRRVLVGTRPMTR 380 (463)
T ss_pred CCCEEEeeecCCCcccHHHHHHHHHHHHHHHhCCCCCCcccccCCeEEEcCCCcEeeeCCHHHHHHcCCCeEEEEEecCc
Confidence 9999999999999999999999999999999985 556777889999999999999999999999999999999999999
Q ss_pred chhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhh
Q psy9583 784 NSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE 860 (866)
Q Consensus 784 ~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 860 (866)
+.++.+.+++.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|.+.++++...
T Consensus 381 ~~~~~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~ 457 (463)
T PRK06370 381 VGRAVEKGETQGFMKVVVDADTDRILGATILGVHGDEMIHEILDAMYAGAPYTTLSRAIHIHPTVSELIPTLAQALR 457 (463)
T ss_pred chhHHhcCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcccCCChHHHHHHHHHhhh
Confidence 99998888889999999999999999999999999999999999999999999999999999999999999998764
No 18
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=1.7e-69 Score=620.84 Aligned_cols=459 Identities=37% Similarity=0.616 Sum_probs=407.0
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.+|||+||||||||++||.+|++.|++|+|||++ .+||+|.+.||+|+|.++...+..+.+......+|+. .
T Consensus 3 ~~~DvvIIG~GpaG~~AA~~aa~~G~~V~lie~~-------~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~~gi~-~ 74 (466)
T PRK07818 3 THYDVVVLGAGPGGYVAAIRAAQLGLKTAVVEKK-------YWGGVCLNVGCIPSKALLRNAELAHIFTKEAKTFGIS-G 74 (466)
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-------CCCCceecCCccccHHHHhhHHHHHHHHHHHHhcCCC-c
Confidence 3599999999999999999999999999999984 7999999999999999998877777665545567776 3
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~ 546 (866)
...++|..+..+.+.+++.+...+...++..+|+.+.+...+.+. +++.+...++ .++.||+||||||+.|+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~~~~~~~-----~~v~v~~~~g~~~~~~~d~lViATGs~p~~ 149 (466)
T PRK07818 75 EVTFDYGAAFDRSRKVAEGRVKGVHFLMKKNKITEIHGYGTFTDA-----NTLEVDLNDGGTETVTFDNAIIATGSSTRL 149 (466)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcCC-----CEEEEEecCCCeeEEEcCEEEEeCCCCCCC
Confidence 457899999999998888887777778888899999999988876 7888865443 579999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
+|+.+.. ..++++++.......+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+|+++...+++.|+++||
T Consensus 150 ~pg~~~~-~~v~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV 228 (466)
T PRK07818 150 LPGTSLS-ENVVTYEEQILSRELPKSIVIAGAGAIGMEFAYVLKNYGVDVTIVEFLDRALPNEDAEVSKEIAKQYKKLGV 228 (466)
T ss_pred CCCCCCC-CcEEchHHHhccccCCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcCCccCHHHHHHHHHHHHHCCC
Confidence 7775432 246777765555567899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIP 706 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~ 706 (866)
+++++++|++++.+++.+.+.+...+|. ..++++|.|++|+|++||++.+.+++.|++++++|+|.||+++||++|
T Consensus 229 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~----~~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~g~i~vd~~~~Ts~p 304 (466)
T PRK07818 229 KILTGTKVESIDDNGSKVTVTVSKKDGK----AQELEADKVLQAIGFAPRVEGYGLEKTGVALTDRGAIAIDDYMRTNVP 304 (466)
T ss_pred EEEECCEEEEEEEeCCeEEEEEEecCCC----eEEEEeCEEEECcCcccCCCCCCchhcCcEECCCCcEeeCCCcccCCC
Confidence 9999999999987666665555422342 247999999999999999998778899999988899999999999999
Q ss_pred CEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCC-CC-CCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 707 NIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKH-SI-NFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 707 ~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~-~~-~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
+|||+|||++.+++++.|..||++||+||++... .+ ++..+|+++|++|+++++|+||+||++.|+++.+..+++..+
T Consensus 305 ~IyAiGD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~ 384 (466)
T PRK07818 305 HIYAIGDVTAKLQLAHVAEAQGVVAAETIAGAETLELGDYRMMPRATFCQPQVASFGLTEEQAREEGYDVKVAKFPFTAN 384 (466)
T ss_pred CEEEEeecCCCcccHhHHHHHHHHHHHHHcCCCCCccCccCCCCeEEECCCCeEEEeCCHHHHHhCCCcEEEEEEECCcc
Confidence 9999999999899999999999999999998653 34 678899999999999999999999999999999999999999
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhcc
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSI 864 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 864 (866)
+|+.+.+++.||+|+++|+++++|||+|++|++++|+|+.+++||++++|++||++++|+|||++|.+.++++.+.++.+
T Consensus 385 ~~~~~~~~~~g~~Klv~~~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~ 464 (466)
T PRK07818 385 GKAHGLGDPTGFVKLVADAKYGELLGGHLIGPDVSELLPELTLAQKWDLTAEELARNVHTHPTLSEALKEAFHGLAGHMI 464 (466)
T ss_pred chhhhcCCCCeEEEEEEECCCCeEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcCccCCCchHHHHHHHHHHhhcCcc
Confidence 99998888899999999999999999999999999999999999999999999999999999999999999998876645
Q ss_pred C
Q psy9583 865 N 865 (866)
Q Consensus 865 ~ 865 (866)
|
T Consensus 465 ~ 465 (466)
T PRK07818 465 N 465 (466)
T ss_pred c
Confidence 4
No 19
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=2.2e-69 Score=620.34 Aligned_cols=474 Identities=57% Similarity=0.950 Sum_probs=419.4
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|.+.||++||||||||++||.++++.|.+|+|||+...+.....+||+|.|.||+|+|.++..++....+.+.+..+|+.
T Consensus 1 ~~~~~DviIIG~G~aG~~aA~~~~~~g~~v~lie~~~~~~g~~~~Gg~c~n~gc~P~k~l~~~a~~~~~~~~~~~~~G~~ 80 (475)
T PRK06327 1 MSKQFDVVVIGAGPGGYVAAIRAAQLGLKVACIEAWKNPKGKPALGGTCLNVGCIPSKALLASSEEFENAGHHFADHGIH 80 (475)
T ss_pred CCcceeEEEECCCHHHHHHHHHHHhCCCeEEEEecccCCCCCCCcCCccccccccHHHHHHHHHHHHHHHHhhHHhcCcc
Confidence 44569999999999999999999999999999998222223357999999999999999999988887776655677887
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.....++|.++..+.+.+++.+...+..+++..+|+++.+++.+++.. ...+++.+...++.+++||+||||||+.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~-~~~~~v~v~~~~~~~~~~d~lViATGs~p~~ 159 (475)
T PRK06327 81 VDGVKIDVAKMIARKDKVVKKMTGGIEGLFKKNKITVLKGRGSFVGKT-DAGYEIKVTGEDETVITAKHVIIATGSEPRH 159 (475)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCC-CCCCEEEEecCCCeEEEeCEEEEeCCCCCCC
Confidence 666678999999999999998888888999999999999999887631 1236677754445689999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
+|+.+.....++++++.+.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++...+.+.|+++||
T Consensus 160 ~p~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~gi 239 (475)
T PRK06327 160 LPGVPFDNKIILDNTGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGAEVTILEALPAFLAAADEQVAKEAAKAFTKQGL 239 (475)
T ss_pred CCCCCCCCceEECcHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCccCCcCCHHHHHHHHHHHHHcCc
Confidence 77766566678888888877778899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIP 706 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~ 706 (866)
+++++++|++++.+++++.+.+.+.+|. ...+++|.+++|+|++|+++.+.++.++++++++|+|.||+++||++|
T Consensus 240 ~i~~~~~v~~i~~~~~~v~v~~~~~~g~----~~~i~~D~vl~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~Ts~~ 315 (475)
T PRK06327 240 DIHLGVKIGEIKTGGKGVSVAYTDADGE----AQTLEVDKLIVSIGRVPNTDGLGLEAVGLKLDERGFIPVDDHCRTNVP 315 (475)
T ss_pred EEEeCcEEEEEEEcCCEEEEEEEeCCCc----eeEEEcCEEEEccCCccCCCCCCcHhhCceeCCCCeEeECCCCccCCC
Confidence 9999999999988776666666533332 347999999999999999997767888999999999999999999999
Q ss_pred CEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchh
Q psy9583 707 NIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSR 786 (866)
Q Consensus 707 ~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~ 786 (866)
+|||+|||++.+++++.|..||++||+||++....+++..+|+++|++|+++++|+||++|++.|+++.+..+++....+
T Consensus 316 ~VyA~GD~~~~~~~~~~A~~~G~~aa~~i~g~~~~~~~~~~p~~~~~~pe~a~vGlte~~a~~~g~~~~~~~~~~~~~~~ 395 (475)
T PRK06327 316 NVYAIGDVVRGPMLAHKAEEEGVAVAERIAGQKGHIDYNTIPWVIYTSPEIAWVGKTEQQLKAEGVEYKAGKFPFMANGR 395 (475)
T ss_pred CEEEEEeccCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEeCCcceEEEeCCHHHHHHcCCCEEEEEEcccccch
Confidence 99999999998999999999999999999987766678889999999999999999999999999999999999999999
Q ss_pred hhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 787 ARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 787 ~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
+.+.+++.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|.+.++++.+.++.++
T Consensus 396 ~~~~~~~~g~~klv~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 474 (475)
T PRK06327 396 ALAMGEPDGFVKIIADAKTDEILGVHVIGPNASELIAEAVVAMEFKASSEDIARICHAHPTLSEVWHEAALAVDKRPLH 474 (475)
T ss_pred hhhcCCCCeEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCCcCCCChHHHHHHHHHHhccCccc
Confidence 9988888999999999999999999999999999999999999999999999999999999999999999876554443
No 20
>PRK07846 mycothione reductase; Reviewed
Probab=100.00 E-value=1.5e-69 Score=615.75 Aligned_cols=444 Identities=26% Similarity=0.461 Sum_probs=396.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+||++||||||+|..||.+ +.|.+|+|||++ .+||+|+|+||+|+|.++..++..+...+ ...+|+....
T Consensus 1 ~yD~vVIG~G~~g~~aa~~--~~G~~V~lie~~-------~~GGtC~n~GCiPsK~l~~~a~~~~~~~~-~~~~g~~~~~ 70 (451)
T PRK07846 1 HYDLIIIGTGSGNSILDER--FADKRIAIVEKG-------TFGGTCLNVGCIPTKMFVYAADVARTIRE-AARLGVDAEL 70 (451)
T ss_pred CCCEEEECCCHHHHHHHHH--HCCCeEEEEeCC-------CCCCcccCcCcchhHHHHHHHHHHHHHHH-HHhCCccCCC
Confidence 3899999999999998876 469999999984 79999999999999999999998887765 5667886555
Q ss_pred cccCHHHHHHHHHHHHHhhhhh-HHHH-HHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSG-ILFL-FKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
..++|.++..+.+..++++... ...+ +++.+|+++.|++.+.+. +++++. +++.+.||+||||||++|+.|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~-----~~V~v~--~g~~~~~d~lViATGs~p~~p 143 (451)
T PRK07846 71 DGVRWPDIVSRVFGRIDPIAAGGEEYRGRDTPNIDVYRGHARFIGP-----KTLRTG--DGEEITADQVVIAAGSRPVIP 143 (451)
T ss_pred CcCCHHHHHHHHHHHHHHHhccchhhhhhhhCCcEEEEEEEEEecC-----CEEEEC--CCCEEEeCEEEEcCCCCCCCC
Confidence 6789999999999888887553 5555 788999999999999866 778773 456899999999999999887
Q ss_pred CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCE
Q psy9583 548 PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 627 (866)
+.++.....+++++++..+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.+ +.||+
T Consensus 144 ~i~g~~~~~~~~~~~~~~l~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~~~ll~~~d~~~~~~l~~l~-~~~v~ 222 (451)
T PRK07846 144 PVIADSGVRYHTSDTIMRLPELPESLVIVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLRHLDDDISERFTELA-SKRWD 222 (451)
T ss_pred CCCCcCCccEEchHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHH-hcCeE
Confidence 76665555678888888877789999999999999999999999999999999999999999999998887655 56899
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
+++++++++++.+++++.+.+. +|. ++++|.|++|+|++||++++.+++.+++++++|+|.||+++||++||
T Consensus 223 i~~~~~v~~i~~~~~~v~v~~~--~g~------~i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~Vd~~~~Ts~p~ 294 (451)
T PRK07846 223 VRLGRNVVGVSQDGSGVTLRLD--DGS------TVEADVLLVATGRVPNGDLLDAAAAGVDVDEDGRVVVDEYQRTSAEG 294 (451)
T ss_pred EEeCCEEEEEEEcCCEEEEEEC--CCc------EeecCEEEEEECCccCccccCchhcCceECCCCcEeECCCcccCCCC
Confidence 9999999999877666655553 554 79999999999999999998778899999989999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhCCC--CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK--HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~--~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|||+|||++.+++++.|.+||+++++||++.. ...++..+|+++|++|+++++|+||+||++.|+++.+..+++....
T Consensus 295 IyA~GD~~~~~~l~~~A~~~g~~~a~ni~~~~~~~~~~~~~~p~~if~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~ 374 (451)
T PRK07846 295 VFALGDVSSPYQLKHVANHEARVVQHNLLHPDDLIASDHRFVPAAVFTHPQIASVGLTENEARAAGLDITVKVQNYGDVA 374 (451)
T ss_pred EEEEeecCCCccChhHHHHHHHHHHHHHcCCCCccccCCCCCCeEEECCCCcEeEeCCHHHHHhcCCCEEEEEEecCcch
Confidence 99999999999999999999999999999752 3467788999999999999999999999999999999999999999
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHcccc-ccCCChhHHHHHHHHHh
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARIC-HVHPSLSEAMKEAAMSI 859 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~-~~~Pt~~e~~~~~~~~~ 859 (866)
++.+.+++.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.++. ++|||++|++.++++.+
T Consensus 375 ~~~~~~~~~g~~Kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~hPt~~e~~~~a~~~~ 449 (451)
T PRK07846 375 YGWAMEDTTGFVKLIADRDTGRLLGAHIIGPQASTLIQPLIQAMSFGLDAREMARGQYWIHPALPEVVENALLGL 449 (451)
T ss_pred hhhhCCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhCCCccCCcHHHHHHHHHHhc
Confidence 988888889999999999999999999999999999999999999999999999875 79999999999988653
No 21
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria.
Probab=100.00 E-value=3.4e-69 Score=614.43 Aligned_cols=442 Identities=27% Similarity=0.437 Sum_probs=398.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+||||||||++||.+++++|++|+|||+. .+||+|.+.||+|+|.++..++..+.+.+ ...+|+....
T Consensus 2 ~yDvvVIG~GpaG~~aA~~aa~~G~~V~lie~~-------~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~ 73 (446)
T TIGR01424 2 DYDLFVIGAGSGGVRAARLAANHGAKVAIAEEP-------RVGGTCVIRGCVPKKLMVYGSTFGGEFED-AAGYGWTVGK 73 (446)
T ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecC-------ccCceeecCCcCchHHHHHHHHHHHHHhh-hHhcCcCCCC
Confidence 599999999999999999999999999999984 79999999999999999999988877765 5677877666
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
..++|.++..+.++.+..+...+...+++.+|+++.+++.+++. +++.+.. ++..+.||+||||||++|..|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~v~~-----~~v~v~~-~g~~~~~d~lIiATGs~p~~p~i 147 (446)
T TIGR01424 74 ARFDWKKLLQKKDDEIARLSGLYKRLLANAGVELLEGRARLVGP-----NTVEVLQ-DGTTYTAKKILIAVGGRPQKPNL 147 (446)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecC-----CEEEEec-CCeEEEcCEEEEecCCcCCCCCC
Confidence 68899999999999999998888899999999999998888776 5666653 45689999999999999987655
Q ss_pred CcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEE
Q psy9583 550 VKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNII 629 (866)
Q Consensus 550 ~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~ 629 (866)
++.+ ..+++++.+.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++...+.+.|++.||+++
T Consensus 148 ~G~~--~~~~~~~~~~l~~~~~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gV~i~ 225 (446)
T TIGR01424 148 PGHE--LGITSNEAFHLPTLPKSILILGGGYIAVEFAGIWRGLGVQVTLIYRGELILRGFDDDMRALLARNMEGRGIRIH 225 (446)
T ss_pred CCcc--ceechHHhhcccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEeCCCCCcccCHHHHHHHHHHHHHCCCEEE
Confidence 4422 34677777777777899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEE
Q psy9583 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIY 709 (866)
Q Consensus 630 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~Vy 709 (866)
+++.+.++..+++++.+.+. ++. ++++|.|++|+|++||++.+.++..+++++++|+|.||+++||++||||
T Consensus 226 ~~~~v~~i~~~~~~~~v~~~--~g~------~i~~D~viva~G~~pn~~~l~l~~~g~~~~~~G~i~vd~~~~Ts~~~Iy 297 (446)
T TIGR01424 226 PQTSLTSITKTDDGLKVTLS--HGE------EIVADVVLFATGRSPNTKGLGLEAAGVELNDAGAIAVDEYSRTSIPSIY 297 (446)
T ss_pred eCCEEEEEEEcCCeEEEEEc--CCc------EeecCEEEEeeCCCcCCCcCCccccCeEECCCCcEEeCCCCccCCCCEE
Confidence 99999999876666655553 554 7999999999999999998778899999998999999999999999999
Q ss_pred EecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcC-CcEEEEEEecCCchhh
Q psy9583 710 AIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHN-ISYNVGIFPFLANSRA 787 (866)
Q Consensus 710 A~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~-~~~~~~~~~~~~~~~~ 787 (866)
|+|||++.+++++.|.+||++||+||++.. .++++..+|+++|+.|+++++|+||+||++.+ +++.+...++....++
T Consensus 298 A~GD~~~~~~l~~~A~~~g~~~a~~i~~~~~~~~~~~~~p~~if~~p~ia~vG~te~~a~~~~~~~~~~~~~~~~~~~~~ 377 (446)
T TIGR01424 298 AVGDVTDRINLTPVAIMEATCFANTEFGNNPTKFDHDLIATAVFSQPPLGTVGLTEEEAREKFTGDILVYRAGFRPMKNT 377 (446)
T ss_pred EeeccCCCccchhHHHHHHHHHHHHHhcCCCCccCcCCCCeEEeCCchhEEEECCHHHHHhhcCCCEEEEEEecCchHhH
Confidence 999999989999999999999999999854 56778899999999999999999999999984 8999998888888888
Q ss_pred hhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHH
Q psy9583 788 RILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEA 855 (866)
Q Consensus 788 ~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~ 855 (866)
.+.+.+.||+||++|+++++|||+|++|++|+|+|+.+++||++++|++||++++|+|||++|.+.++
T Consensus 378 ~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 445 (446)
T TIGR01424 378 FSGRQEKTLMKLVVDEKDDKVLGAHMVGPDAAEIIQGIAIALKMGATKADFDSTVGIHPSSAEEFVTM 445 (446)
T ss_pred hhcCCCceEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCChHHHHhhc
Confidence 77777899999999999999999999999999999999999999999999999999999999998765
No 22
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=100.00 E-value=4.1e-69 Score=612.68 Aligned_cols=442 Identities=29% Similarity=0.468 Sum_probs=393.4
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++|||+||||||||++||.+|++.|++|+|||++ .+||+|.|.||+|+|.++..+...+.+.+ ...+|++..
T Consensus 1 ~~yDvvVIG~GpaG~~aA~~aa~~G~~V~liE~~-------~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~ 72 (450)
T TIGR01421 1 KHYDYLVIGGGSGGIASARRAAEHGAKALLVEAK-------KLGGTCVNVGCVPKKVMWYASDLAERMHD-AADYGFYQN 72 (450)
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEeccc-------ccccceeccCcCccHHHHHHHHHHHHHhH-HhhcCcccC
Confidence 3699999999999999999999999999999984 79999999999999999999988877654 566777643
Q ss_pred -ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 469 -NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 469 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
...++|.++..+.+++++.+...+...+++.+|+++.++.++.+. +++.+ ++..+.||+||||||++|+.|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~~-----~~v~v---~~~~~~~d~vIiAtGs~p~~p 144 (450)
T TIGR01421 73 LENTFNWPELKEKRDAYVDRLNGIYQKNLEKNKVDVIFGHARFTKD-----GTVEV---NGRDYTAPHILIATGGKPSFP 144 (450)
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CEEEE---CCEEEEeCEEEEecCCCCCCC
Confidence 335899999999999999988888888999999999999988655 66666 356799999999999999876
Q ss_pred -CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 548 -PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 548 -p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
+.++. ...+++++++.+...+++++|||||++|+|+|..|+++|++|+++++.+++++.+|+++.+.+++.|+++||
T Consensus 145 ~~i~g~--~~~~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~il~~~d~~~~~~~~~~l~~~gI 222 (450)
T TIGR01421 145 ENIPGA--ELGTDSDGFFALEELPKRVVIVGAGYIAVELAGVLHGLGSETHLVIRHERVLRSFDSMISETITEEYEKEGI 222 (450)
T ss_pred CCCCCC--ceeEcHHHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCcccCHHHHHHHHHHHHHcCC
Confidence 44332 234677888877778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
++++++.+++++.++++ +.+.++ ++. ..+++|.|++|+|++||++.+.++..+++++++|+|.||+++||++
T Consensus 223 ~i~~~~~v~~i~~~~~~~~~v~~~--~g~-----~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~G~i~vd~~~~T~~ 295 (450)
T TIGR01421 223 NVHKLSKPVKVEKTVEGKLVIHFE--DGK-----SIDDVDELIWAIGRKPNTKGLGLENVGIKLNEKGQIIVDEYQNTNV 295 (450)
T ss_pred EEEcCCEEEEEEEeCCceEEEEEC--CCc-----EEEEcCEEEEeeCCCcCcccCCccccCcEECCCCcEEeCCCCcCCC
Confidence 99999999999875443 455553 442 3799999999999999999877899999999999999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC--CCCCCCCccEEEEccCceeeeecCHHHHHhc-CCc-EEEEEEec
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK--HSINFNALPFVIYTFPEIASVGKTEQYLKKH-NIS-YNVGIFPF 781 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~--~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~~-~~~~~~~~ 781 (866)
|||||+|||++.+.+++.|.+||++||+||++.. .+.++..+|+++|++|+++++|+||+||++. |++ +.+...++
T Consensus 296 p~IyAiGD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~f~~p~ia~vGlte~~a~~~~g~~~~~~~~~~~ 375 (450)
T TIGR01421 296 PGIYALGDVVGKVELTPVAIAAGRKLSERLFNGKTDDKLDYNNVPTVVFSHPPIGTIGLTEKEAIEKYGKENIKVYNSSF 375 (450)
T ss_pred CCEEEEEecCCCcccHHHHHHHHHHHHHHHhcCCCCCccCcccCCeEEeCCCceEEEeCCHHHHHhhcCCCCEEEEEEEc
Confidence 9999999999999999999999999999999643 3467889999999999999999999999877 654 88888888
Q ss_pred CCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHH
Q psy9583 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEA 855 (866)
Q Consensus 782 ~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~ 855 (866)
....++...+.+.||+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|.+.++
T Consensus 376 ~~~~~~~~~~~~~g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 449 (450)
T TIGR01421 376 TPMYYAMTSEKQKCRMKLVCAGKEEKVVGLHGIGDGVDEMLQGFAVAIKMGATKADFDNTVAIHPTSSEELVTM 449 (450)
T ss_pred ChhHHHHhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHhhc
Confidence 88888888888899999999999999999999999999999999999999999999999999999999998765
No 23
>TIGR01423 trypano_reduc trypanothione-disulfide reductase. Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Probab=100.00 E-value=4.5e-69 Score=613.16 Aligned_cols=451 Identities=27% Similarity=0.454 Sum_probs=391.7
Q ss_pred cccceeeecCCccHHHHHHHHHHC-CCeEEEEeccCC--CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWKD--NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGI 465 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~~--~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi 465 (866)
++|||+||||||||+.||.+++++ |.+|+|||+... +.+...+||+|+|+||+|+|.++..++..+...+ ...+|+
T Consensus 2 ~~~DviVIG~G~~G~~aA~~aa~~~g~~V~lie~~~~~~~~~~~~~GGtCln~GCiPsK~l~~~a~~~~~~~~-~~~~gi 80 (486)
T TIGR01423 2 KAFDLVVIGAGSGGLEAGWNAATLYKKRVAVIDVQTHHGPPHYAALGGTCVNVGCVPKKLMVTGAQYMDTLRE-SAGFGW 80 (486)
T ss_pred CccCEEEECCChHHHHHHHHHHHhcCCEEEEEecccCccccccCCccCeecCcCCccHHHHHHHHHHHHHHHH-hhccCe
Confidence 469999999999999999999997 999999997310 0011369999999999999999999988887765 466777
Q ss_pred ccc--ccccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcC---C---ceEEEecEE
Q psy9583 466 NTQ--NVTLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINK---T---KETITAKYI 536 (866)
Q Consensus 466 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~---~---g~~i~~d~l 536 (866)
... ...++|.++..+.+.+++.+...+..++++ .+|+++.|...+.++ +++.|... + .+.+.||+|
T Consensus 81 ~~~~~~~~~d~~~~~~~~~~~v~~~~~~~~~~l~~~~gv~~i~G~a~f~~~-----~~v~V~~~~~~~~~~~~~~~~d~l 155 (486)
T TIGR01423 81 EFDRSSVKANWKALIAAKNKAVLDINKSYEGMFADTEGLTFFLGWGALEDK-----NVVLVRESADPKSAVKERLQAEHI 155 (486)
T ss_pred eccCCccccCHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEEEEccC-----CEEEEeeccCCCCCcceEEECCEE
Confidence 532 457899999999999999999888888887 499999999999877 88888631 1 257999999
Q ss_pred EEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhc---CCcEEEEecCCcCCCcccHHH
Q psy9583 537 IIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRL---GSEVTILEMSSNFLNTVDEEI 613 (866)
Q Consensus 537 ViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~---g~~Vtli~~~~~~l~~~d~~~ 613 (866)
|||||++|..|+.++.+ .++++++.+.+...+++++|||||++|+|+|..|..+ |.+|+++++.+++++.+|+++
T Consensus 156 IIATGs~p~~p~i~G~~--~~~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~~~~l~~~G~~Vtli~~~~~il~~~d~~~ 233 (486)
T TIGR01423 156 LLATGSWPQMLGIPGIE--HCISSNEAFYLDEPPRRVLTVGGGFISVEFAGIFNAYKPRGGKVTLCYRNNMILRGFDSTL 233 (486)
T ss_pred EEecCCCCCCCCCCChh--heechhhhhccccCCCeEEEECCCHHHHHHHHHHHHhccCCCeEEEEecCCccccccCHHH
Confidence 99999999877655432 3678888877777889999999999999999888765 999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCC
Q psy9583 614 AKKAFHLLNKQGLNIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNEN 692 (866)
Q Consensus 614 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 692 (866)
.+.+.+.|+++||++++++.+++++.++++ ..+.+. ++. ++++|.|++|+|++|+++.+.+++++++++++
T Consensus 234 ~~~l~~~L~~~GI~i~~~~~v~~i~~~~~~~~~v~~~--~g~------~i~~D~vl~a~G~~Pn~~~l~l~~~gl~~~~~ 305 (486)
T TIGR01423 234 RKELTKQLRANGINIMTNENPAKVTLNADGSKHVTFE--SGK------TLDVDVVMMAIGRVPRTQTLQLDKVGVELTKK 305 (486)
T ss_pred HHHHHHHHHHcCCEEEcCCEEEEEEEcCCceEEEEEc--CCC------EEEcCEEEEeeCCCcCcccCCchhhCceECCC
Confidence 999999999999999999999999875443 445543 454 79999999999999999988788999999989
Q ss_pred CcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcC
Q psy9583 693 NFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHN 771 (866)
Q Consensus 693 G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~ 771 (866)
|+|.||+++||++|||||+|||++.+++++.|.+||++||+||++.. ..+++..+|+++|+.|++++||+||+||++.+
T Consensus 306 G~I~Vd~~l~Ts~~~IyA~GDv~~~~~l~~~A~~qG~~aa~ni~g~~~~~~~~~~vp~~vft~peia~vGlte~eA~~~~ 385 (486)
T TIGR01423 306 GAIQVDEFSRTNVPNIYAIGDVTDRVMLTPVAINEGAAFVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLVEEDAAKKF 385 (486)
T ss_pred CCEecCCCCcCCCCCEEEeeecCCCcccHHHHHHHHHHHHHHHhCCCCcccCCCCCCEEEeCCCceEEeeCCHHHHHhcC
Confidence 99999999999999999999999999999999999999999999864 44677789999999999999999999999987
Q ss_pred CcEEEEEEecCCchhhhhcCC--ceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChh
Q psy9583 772 ISYNVGIFPFLANSRARILGE--TSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLS 849 (866)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~--~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~ 849 (866)
.++.+...++....+... +. +.||+||++|+++++|||+|++|++|.|+|+.+++||++++|++||++++|+|||++
T Consensus 386 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~Klv~d~~~~~iLGa~ivg~~a~elI~~~~~ai~~~~t~~dl~~~~~~hPt~s 464 (486)
T TIGR01423 386 EKVAVYESSFTPLMHNIS-GSKYKKFVAKIVTNHADGTVLGVHLLGDSSPEIIQAVGICLKLNAKISDFYNTIGVHPTSA 464 (486)
T ss_pred CceEEEEEeeCchhhhhc-cCccCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhcccCCCCcH
Confidence 777777777665544433 33 369999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy9583 850 EAMKEAA 856 (866)
Q Consensus 850 e~~~~~~ 856 (866)
|.+.++.
T Consensus 465 E~~~~~~ 471 (486)
T TIGR01423 465 EELCSMR 471 (486)
T ss_pred HHHHhhc
Confidence 9998886
No 24
>PRK06116 glutathione reductase; Validated
Probab=100.00 E-value=8.2e-69 Score=613.51 Aligned_cols=444 Identities=28% Similarity=0.463 Sum_probs=397.7
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+.+|||+||||||||++||.+|+++|++|+|||+. .+||+|.|.||+|+|.+++.++..+.+......+|+.
T Consensus 1 m~~~~DvvVIG~GpaG~~aA~~~a~~G~~V~liE~~-------~~GG~c~n~gciP~k~l~~~~~~~~~~~~~~~~~g~~ 73 (450)
T PRK06116 1 MTKDYDLIVIGGGSGGIASANRAAMYGAKVALIEAK-------RLGGTCVNVGCVPKKLMWYGAQIAEAFHDYAPGYGFD 73 (450)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecc-------chhhhhhccCcchHHHHHHHHHHHHHHHhHHHhcCCC
Confidence 445699999999999999999999999999999984 7999999999999999999888877666544567776
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.....++|..+..+.+..++++...+...+++.+|+++.+++.+++. +++++ ++..+.||+||||||+.|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~v~~-----~~v~~---~g~~~~~d~lViATGs~p~~ 145 (450)
T PRK06116 74 VTENKFDWAKLIANRDAYIDRLHGSYRNGLENNGVDLIEGFARFVDA-----HTVEV---NGERYTADHILIATGGRPSI 145 (450)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CEEEE---CCEEEEeCEEEEecCCCCCC
Confidence 55567899999999888888888888888899999999999888765 67777 45789999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
|+.++. ..++++++.+.+...+++++|||+|++|+|+|..|.++|.+|+++++++.+++.+++++.+.+.+.|++.||
T Consensus 146 p~i~g~--~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~L~~~GV 223 (450)
T PRK06116 146 PDIPGA--EYGITSDGFFALEELPKRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGDAPLRGFDPDIRETLVEEMEKKGI 223 (450)
T ss_pred CCCCCc--ceeEchhHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCccccCHHHHHHHHHHHHHCCc
Confidence 765442 346778777777778899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
+++++++|.+++.++++ +.+.+. +|. ++++|.|++|+|++|+++.+.++..+++++++|+|.||+++||++
T Consensus 224 ~i~~~~~V~~i~~~~~g~~~v~~~--~g~------~i~~D~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~Ts~ 295 (450)
T PRK06116 224 RLHTNAVPKAVEKNADGSLTLTLE--DGE------TLTVDCLIWAIGREPNTDGLGLENAGVKLNEKGYIIVDEYQNTNV 295 (450)
T ss_pred EEECCCEEEEEEEcCCceEEEEEc--CCc------EEEeCEEEEeeCCCcCCCCCCchhcCceECCCCcEecCCCCCcCC
Confidence 99999999999876544 555543 554 789999999999999999877788999999999999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC--CCCCCCCccEEEEccCceeeeecCHHHHHhcCCc--EEEEEEec
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK--HSINFNALPFVIYTFPEIASVGKTEQYLKKHNIS--YNVGIFPF 781 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~--~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~--~~~~~~~~ 781 (866)
|||||+|||++.+++++.|++||++||+||++.. ...++..+|+++|++|++++||+||+||++.|++ +.+...++
T Consensus 296 ~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~if~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~ 375 (450)
T PRK06116 296 PGIYAVGDVTGRVELTPVAIAAGRRLSERLFNNKPDEKLDYSNIPTVVFSHPPIGTVGLTEEEAREQYGEDNVKVYRSSF 375 (450)
T ss_pred CCEEEEeecCCCcCcHHHHHHHHHHHHHHHhCCCCCCcCCcCCCCeEEeCCCccEEeeCCHHHHHHhCCCCcEEEEEEec
Confidence 9999999999988999999999999999999854 3457889999999999999999999999999887 88888888
Q ss_pred CCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHH
Q psy9583 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEA 855 (866)
Q Consensus 782 ~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~ 855 (866)
....++...+++.||+||++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|++.++
T Consensus 376 ~~~~~~~~~~~~~g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 449 (450)
T PRK06116 376 TPMYTALTGHRQPCLMKLVVVGKEEKVVGLHGIGFGADEMIQGFAVAIKMGATKADFDNTVAIHPTAAEEFVTM 449 (450)
T ss_pred chhHHHHhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcccccCCChHHHHhhc
Confidence 88888887788899999999999999999999999999999999999999999999999999999999999865
No 25
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=100.00 E-value=1.4e-70 Score=631.58 Aligned_cols=379 Identities=33% Similarity=0.557 Sum_probs=321.6
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
+++|+||+||+ |+||+|++|+|++||.|++||+|++|||||+.++|+||++|+|.++++++|+.|++|++|+.++..++
T Consensus 119 ~~~~~~P~~g~-~~eg~i~~w~v~~Gd~V~~g~~l~~vetdK~~~ev~Ap~~G~v~~i~~~~G~~v~~G~~l~~i~~~~~ 197 (547)
T PRK11855 119 VVEVKVPDIGE-ITEVEVIEWLVKVGDTVEEDQSLITVETDKATMEIPSPVAGVVKEIKVKVGDKVSVGSLLVVIEVAAA 197 (547)
T ss_pred ceEEecCCCCC-cceeEEeEEEeCCCCeecCCCeeEEEEecceeEEecCCCCeEEEEEecCCCCEecCCCEEEEEecCCC
Confidence 47899999999 99999999999999999999999999999999999999999999999999999999999999975421
Q ss_pred cc-----cccc-------c---ccccc----c-c--c----cccc-ccchhHHHhhhhCCCCcccccCCCCCCCceeehh
Q psy9583 83 KL-----SSKT-------E---IKNKK----D-I--K----NLNT-IVMPSAKKILSDNNLEISKINNGTGKDGRIIKED 135 (866)
Q Consensus 83 ~~-----~~~~-------~---~~~~~----~-~--~----~~~~-~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~D 135 (866)
.. ++.. . ..+.+ . . . ..+. ++||+||+||+++||||+.| +|||++|||+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gidl~~v-~gtG~~GrI~~~D 276 (547)
T PRK11855 198 APAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRLARELGVDLSQV-KGTGKKGRITKED 276 (547)
T ss_pred ccccccCCCCCCCccccccCCCCCCcccccCCccccccccccCCcccCChHHHHHHHHhCCCHHHC-cCCCCCCcEeHHH
Confidence 10 0000 0 00000 0 0 0 1122 68999999999999999999 8999999999999
Q ss_pred HHhhhhhccccccccc--cccCCCccc--cccc--cC--CCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHH
Q psy9583 136 VLKVLSSIKNINEEKQ--EKYKPYLDS--ISIK--NN--SRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSI 207 (866)
Q Consensus 136 v~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~--~~--~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l 207 (866)
|++|+.........++ +...+.... .+.+ .. ....+.+||+++||.||++|++|++++|||+++.++|+|+|
T Consensus 277 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~r~~ia~~m~~S~~~iP~~~~~~evd~t~l 356 (547)
T PRK11855 277 VQAFVKGAMSAAAAAAAAAAAAGGGGLGLLPWPKVDFSKFGEIETKPLSRIKKISAANLHRSWVTIPHVTQFDEADITDL 356 (547)
T ss_pred HHHHhhccccccccccccccccccccccccCCccccccccCcceEEeCcHHHHHHHHHHHHHhhcCCeEEEEEEEEChHH
Confidence 9999753211100000 000000000 0000 00 01235689999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEe--CCeeEEccceeEEEEEecCCceEEeEEecCCCCC
Q psy9583 208 IDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVD--GNNIIYHKYYDIGIAISSSRGLVVPILRNADTMS 285 (866)
Q Consensus 208 ~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~--~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~ 285 (866)
+++|+++++.+++. |.++||++||+||+++||++||+||++|+ ++.+++++++|||+||++++||++|||+|++++|
T Consensus 357 ~~~r~~~~~~~~~~-g~k~s~~~~likAv~~al~~~P~ln~~~~~~~~~i~~~~~i~i~~Av~~~~gl~vpvi~~~~~~s 435 (547)
T PRK11855 357 EALRKQLKKEAEKA-GVKLTMLPFFIKAVVAALKEFPVFNASLDEDGDELTYKKYFNIGFAVDTPNGLVVPVIKDVDKKS 435 (547)
T ss_pred HHHHHHhhhhhhhc-CCCCCHHHHHHHHHHHHHHhCcHhhEEEccCCCEEEEeCCccEEEEEECCCccEeCCcCCCccCC
Confidence 99999998765443 89999999999999999999999999998 5689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeee
Q psy9583 286 IADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFA 365 (866)
Q Consensus 286 ~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~ 365 (866)
+.+|+++++++++++|+|+|.++|++||||||||+||+|.++|+|+|||||+|||++|++.++|++.++.+.+|++|+++
T Consensus 436 l~~i~~~~~~l~~~ar~~~l~~~~~~ggtftiSnlg~~g~~~~tpii~~pq~ail~~G~~~~~pv~~~~~~~~r~~m~ls 515 (547)
T PRK11855 436 LLEIAREIAELAKKARDGKLKPDDMQGGCFTISSLGGIGGTAFTPIINAPEVAILGVGKSQMKPVWDGKEFVPRLMLPLS 515 (547)
T ss_pred HHHHHHHHHHHHHHHHcCCCChHhcCCceEEEeCCccccccceecCcCCCceEEEEcccceEeeeeeCCEEEEEeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred ecccccccccchhhhhhhh
Q psy9583 366 LSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 366 l~~dhr~~dg~~a~~~~~~ 384 (866)
++||||++||.++++|+..
T Consensus 516 lt~DHRviDG~~aa~Fl~~ 534 (547)
T PRK11855 516 LSYDHRVIDGATAARFTNY 534 (547)
T ss_pred EEccchhcCcHHHHHHHHH
Confidence 9999999999999988764
No 26
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=100.00 E-value=2.3e-68 Score=612.41 Aligned_cols=456 Identities=44% Similarity=0.729 Sum_probs=411.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.|||+||||||||++||..|+++|++|+|||+. .+||+|.+.||+|+|.++..++.++.... ...+|+....
T Consensus 4 ~yDvvVIGaGpaG~~aA~~aa~~G~~V~liE~~-------~~GG~c~~~gciP~k~l~~~~~~~~~~~~-~~~~g~~~~~ 75 (462)
T PRK06416 4 EYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKE-------KLGGTCLNRGCIPSKALLHAAERADEARH-SEDFGIKAEN 75 (462)
T ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEEecc-------ccccceeecccCCcHHHHHhhhHHHHHHH-HHhcCcccCC
Confidence 599999999999999999999999999999985 49999999999999999999888777665 5667776555
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEc-CCceEEEecEEEEecCCCCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIIN-KTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~-~~g~~i~~d~lViATGs~p~~~p 548 (866)
..++|..+..+.+...+.+...+...+++.+|+++.+++.+++. +.+.+.. +++..+.||+||||||++|..||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~-----~~~~v~~~~~~~~~~~d~lViAtGs~p~~~p 150 (462)
T PRK06416 76 VGIDFKKVQEWKNGVVNRLTGGVEGLLKKNKVDIIRGEAKLVDP-----NTVRVMTEDGEQTYTAKNIILATGSRPRELP 150 (462)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CEEEEecCCCcEEEEeCEEEEeCCCCCCCCC
Confidence 57899999999999888888888888899999999999988766 6777764 23478999999999999998888
Q ss_pred CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 549 GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
+....+..++++++...+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|+++||++
T Consensus 151 g~~~~~~~v~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gV~i 230 (462)
T PRK06416 151 GIEIDGRVIWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILPGEDKEISKLAERALKKRGIKI 230 (462)
T ss_pred CCCCCCCeEEcchHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCcCCcCCHHHHHHHHHHHHHcCCEE
Confidence 77656667888888888777889999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCE
Q psy9583 629 ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNI 708 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~V 708 (866)
++++.+++++.+++.+.+.+..+ +. ..++++|.|++|+|++|+..++++++.+++++ +|+|.||+++||++|+|
T Consensus 231 ~~~~~V~~i~~~~~~v~v~~~~g-g~----~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~g~i~vd~~~~t~~~~V 304 (462)
T PRK06416 231 KTGAKAKKVEQTDDGVTVTLEDG-GK----EETLEADYVLVAVGRRPNTENLGLEELGVKTD-RGFIEVDEQLRTNVPNI 304 (462)
T ss_pred EeCCEEEEEEEeCCEEEEEEEeC-Ce----eEEEEeCEEEEeeCCccCCCCCCchhcCCeec-CCEEeECCCCccCCCCE
Confidence 99999999988766666655421 21 24799999999999999999877788999998 89999999999999999
Q ss_pred EEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhh
Q psy9583 709 YAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRAR 788 (866)
Q Consensus 709 yA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~ 788 (866)
||+|||++.+++++.|..||++||.||++....+++..+|.+.|++|+++++|+||+||++.|+++.+..+++....++.
T Consensus 305 yAiGD~~~~~~~~~~A~~~g~~aa~ni~~~~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~ 384 (462)
T PRK06416 305 YAIGDIVGGPMLAHKASAEGIIAAEAIAGNPHPIDYRGIPAVTYTHPEVASVGLTEAKAKEEGFDVKVVKFPFAGNGKAL 384 (462)
T ss_pred EEeeecCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCeEEEEEecCcChHhH
Confidence 99999998889999999999999999999877777888999999999999999999999999999999999999899999
Q ss_pred hcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhcc
Q psy9583 789 ILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSI 864 (866)
Q Consensus 789 ~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 864 (866)
+.+.+.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|.+.++++.++++.+
T Consensus 385 ~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~ 460 (462)
T PRK06416 385 ALGETDGFVKLIFDKKDGEVLGAHMVGARASELIQEAQLAINWEATPEDLALTIHPHPTLSEALGEAALAAAGKPL 460 (462)
T ss_pred hcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCccCCCCHHHHHHHHHHHhccCcc
Confidence 8888899999999999999999999999999999999999999999999999999999999999999987766544
No 27
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=100.00 E-value=1.3e-68 Score=614.77 Aligned_cols=452 Identities=33% Similarity=0.531 Sum_probs=405.0
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhc-Cccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEY-GINT 467 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~-gi~~ 467 (866)
++|||+||||||||++||.+|++.|++|+|||+. +.+||+|.+.||+|+|.+......+..... ...+ .+.
T Consensus 4 ~~yDvvVIGaGpaG~~aA~~la~~G~~v~liE~~------~~~GG~~~~~gcipsk~l~~~~~~~~~~~~-~~~~~~~~- 75 (461)
T PRK05249 4 YDYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERY------RNVGGGCTHTGTIPSKALREAVLRLIGFNQ-NPLYSSYR- 75 (461)
T ss_pred ccccEEEECCCHHHHHHHHHHHhCCCEEEEEecc------ccccccccccCCCCHHHHHHHHHHHHHHhh-hhhhcccC-
Confidence 3699999999999999999999999999999996 589999999999999998877666544332 1111 111
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCc
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~ 545 (866)
.....+|..+..+.+...+++...+...+++.+|+++.++..+++. +.+.+...++ ..+.||+||||||+.|+
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~-----~~~~v~~~~g~~~~~~~d~lviATGs~p~ 150 (461)
T PRK05249 76 VKLRITFADLLARADHVINKQVEVRRGQYERNRVDLIQGRARFVDP-----HTVEVECPDGEVETLTADKIVIATGSRPY 150 (461)
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecC-----CEEEEEeCCCceEEEEcCEEEEcCCCCCC
Confidence 1245689999999998888888888888999999999999888766 7777766555 47999999999999999
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.||..+.....++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+|+++...+.+.|+++|
T Consensus 151 ~p~~~~~~~~~v~~~~~~~~~~~~~~~v~IiGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~g 230 (461)
T PRK05249 151 RPPDVDFDHPRIYDSDSILSLDHLPRSLIIYGAGVIGCEYASIFAALGVKVTLINTRDRLLSFLDDEISDALSYHLRDSG 230 (461)
T ss_pred CCCCCCCCCCeEEcHHHhhchhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCCcCCHHHHHHHHHHHHHcC
Confidence 88777766777889988888878899999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
|++++++.+++++.+++++.+.+. +|. ++++|.|++|+|++||++.+.+++.+++++++|+|.||+++||++
T Consensus 231 I~v~~~~~v~~i~~~~~~~~v~~~--~g~------~i~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 302 (461)
T PRK05249 231 VTIRHNEEVEKVEGGDDGVIVHLK--SGK------KIKADCLLYANGRTGNTDGLNLENAGLEADSRGQLKVNENYQTAV 302 (461)
T ss_pred CEEEECCEEEEEEEeCCeEEEEEC--CCC------EEEeCEEEEeecCCccccCCCchhhCcEecCCCcEeeCCCcccCC
Confidence 999999999999876666665543 554 799999999999999999877889999999899999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|+|||+|||++.+++++.|.+||++||.||+|.....++..+|+++|+.|+++++|+||+||++.|+++.+...++....
T Consensus 303 ~~IyAiGD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~i~~~p~ia~vG~te~~a~~~g~~~~~~~~~~~~~~ 382 (461)
T PRK05249 303 PHIYAVGDVIGFPSLASASMDQGRIAAQHAVGEATAHLIEDIPTGIYTIPEISSVGKTEQELTAAKVPYEVGRARFKELA 382 (461)
T ss_pred CCEEEeeecCCCcccHhHHHHHHHHHHHHHcCCCcccccCCCCeEEECCCcceEecCCHHHHHHcCCCeEEEEEcccccc
Confidence 99999999999899999999999999999998766677889999999999999999999999999999999999999999
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhh
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIEN 861 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~ 861 (866)
++.+.+++.||+||++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++++|||++|++.++++.+.+
T Consensus 383 ~~~~~~~~~g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~ 458 (461)
T PRK05249 383 RAQIAGDNVGMLKILFHRETLEILGVHCFGERATEIIHIGQAIMEQKGTIEYFVNTTFNYPTMAEAYRVAALDGLN 458 (461)
T ss_pred ceeecCCCCcEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHHhc
Confidence 9888888899999999999999999999999999999999999999999999999999999999999999887654
No 28
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=100.00 E-value=9.9e-69 Score=609.90 Aligned_cols=443 Identities=28% Similarity=0.484 Sum_probs=390.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+||++|||+||+|+.||.. ..|.+|+|||++ .+||+|+|+||+|+|.++..++..+.+.+ ...+|+....
T Consensus 2 ~yD~vvIG~G~~g~~aa~~--~~g~~V~lie~~-------~~GGtC~n~GCiPsK~l~~~a~~~~~~~~-~~~~g~~~~~ 71 (452)
T TIGR03452 2 HYDLIIIGTGSGNSIPDPR--FADKRIAIVEKG-------TFGGTCLNVGCIPTKMFVYAAEVAQSIGE-SARLGIDAEI 71 (452)
T ss_pred CcCEEEECCCHHHHHHHHH--HCCCeEEEEeCC-------CCCCeeeccCccchHHHHHHHHHHHHHHH-hhccCeeCCC
Confidence 5999999999999998654 469999999984 79999999999999999999998887775 5677886545
Q ss_pred cccCHHHHHHHHHH-HHHhhhhh-HHHHH--HhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNN-IIKKNNSG-ILFLF--KKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~-~~~~~~~~-~~~~~--~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
..+||.++..+... ..+.+... ....+ ++.||+++.|+.++.+. +++.+ .++.++.||+||||||++|.
T Consensus 72 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~-----~~V~~--~~g~~~~~d~lIiATGs~p~ 144 (452)
T TIGR03452 72 DSVRWPDIVSRVFGDRIDPIAAGGEDYRRGDETPNIDVYDGHARFVGP-----RTLRT--GDGEEITGDQIVIAAGSRPY 144 (452)
T ss_pred CccCHHHHHHHhhhhHhHHHhccchHhhhhcccCCeEEEEEEEEEecC-----CEEEE--CCCcEEEeCEEEEEECCCCC
Confidence 57899999999877 66665443 22323 44899999999999866 77776 34567999999999999998
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.|++.+..+..++++++++++...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++...+.+.+ +.|
T Consensus 145 ~p~~~~~~~~~~~~~~~~~~l~~~~k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~~ll~~~d~~~~~~l~~~~-~~g 223 (452)
T TIGR03452 145 IPPAIADSGVRYHTNEDIMRLPELPESLVIVGGGYIAAEFAHVFSALGTRVTIVNRSTKLLRHLDEDISDRFTEIA-KKK 223 (452)
T ss_pred CCCCCCCCCCEEEcHHHHHhhhhcCCcEEEECCCHHHHHHHHHHHhCCCcEEEEEccCccccccCHHHHHHHHHHH-hcC
Confidence 7776554455678888888887789999999999999999999999999999999999999989999998887755 468
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
|++++++.+++++.+++++.+.+. +|. ++++|.+++|+|++||++++.++.+|++++++|+|.||+++||++
T Consensus 224 I~i~~~~~V~~i~~~~~~v~v~~~--~g~------~i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~vd~~~~Ts~ 295 (452)
T TIGR03452 224 WDIRLGRNVTAVEQDGDGVTLTLD--DGS------TVTADVLLVATGRVPNGDLLDAEAAGVEVDEDGRIKVDEYGRTSA 295 (452)
T ss_pred CEEEeCCEEEEEEEcCCeEEEEEc--CCC------EEEcCEEEEeeccCcCCCCcCchhcCeeECCCCcEeeCCCcccCC
Confidence 999999999999877666655553 554 799999999999999999988888999999899999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC--CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCC
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK--HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLA 783 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~--~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~ 783 (866)
|+|||+|||++.+++.+.|.+||+++|+||++.. ..+++..+|+++|++|+++++|+||+||++.|+++.+...++..
T Consensus 296 ~~IyA~GD~~~~~~l~~~A~~~g~~~a~ni~~~~~~~~~~~~~~p~~i~t~p~ia~vGlte~ea~~~g~~~~~~~~~~~~ 375 (452)
T TIGR03452 296 RGVWALGDVSSPYQLKHVANAEARVVKHNLLHPNDLRKMPHDFVPSAVFTHPQIATVGLTEQEAREAGHDITVKIQNYGD 375 (452)
T ss_pred CCEEEeecccCcccChhHHHHHHHHHHHHhcCCCCcccCCCCCCCeEEECCCCeeeeeCCHHHHHhcCCCeEEEEecCCc
Confidence 9999999999998999999999999999999864 35677889999999999999999999999999999999999998
Q ss_pred chhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccc-cccCCChhHHHHHHHHH
Q psy9583 784 NSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARI-CHVHPSLSEAMKEAAMS 858 (866)
Q Consensus 784 ~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~-~~~~Pt~~e~~~~~~~~ 858 (866)
..++.+.+++.||+||++|+++++|||+|++|++|.|+|+.+++||++++|++||+.+ +|+|||++|++.++++.
T Consensus 376 ~~~~~~~~~~~g~~Klv~d~~t~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~hPt~~e~~~~a~~~ 451 (452)
T TIGR03452 376 VAYGWAMEDTTGFCKLIADRDTGKLLGAHIIGPQASSLIQPLITAMAFGLDAREMARKQYWIHPALPEVVENALLG 451 (452)
T ss_pred hhhHhhcCCCCeEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhCCcccCCchHHHHHHHHhc
Confidence 9998888888999999999999999999999999999999999999999999999997 78999999999988864
No 29
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=100.00 E-value=2.4e-68 Score=609.67 Aligned_cols=455 Identities=25% Similarity=0.453 Sum_probs=407.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc--
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ-- 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~-- 468 (866)
.|++|||+|++|+.||..++++|.+|+|||++ .+||+|++.||+|+|.++..++..+.+.. ...+|+...
T Consensus 2 ~~vvviG~G~~G~~~a~~~~~~g~~v~~~e~~-------~~gG~c~~~gciPsK~l~~~a~~~~~~~~-~~~~g~~~~~~ 73 (466)
T PRK07845 2 TRIVIIGGGPGGYEAALVAAQLGADVTVIERD-------GLGGAAVLTDCVPSKTLIATAEVRTELRR-AAELGIRFIDD 73 (466)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEEcc-------CCCCcccccCCcchHHHHHHHHHHHHHHH-HHhCCcccccC
Confidence 58999999999999999999999999999985 68999999999999999998888777765 667787642
Q ss_pred -ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCce--EEEecEEEEecCCCCc
Q psy9583 469 -NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIATGSKAR 545 (866)
Q Consensus 469 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~--~i~~d~lViATGs~p~ 545 (866)
...++|..+..+.+...+.+...+...+++++|+++.+++.+++. +.+.+++.+.+.+|. ++.||+||||||+.|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~~~~-~~~~~~v~V~~~~g~~~~~~~d~lViATGs~p~ 152 (466)
T PRK07845 74 GEARVDLPAVNARVKALAAAQSADIRARLEREGVRVIAGRGRLIDP-GLGPHRVKVTTADGGEETLDADVVLIATGASPR 152 (466)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEeec-ccCCCEEEEEeCCCceEEEecCEEEEcCCCCCC
Confidence 457899999999999988888788888999999999999988320 012277888665553 7999999999999998
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.+|+.......++++.++.+....+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++...+.+.|+++|
T Consensus 153 ~~p~~~~~~~~v~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~L~~~g 232 (466)
T PRK07845 153 ILPTAEPDGERILTWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGVKVTLVSSRDRVLPGEDADAAEVLEEVFARRG 232 (466)
T ss_pred CCCCCCCCCceEEeehhhhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcCCCCCCHHHHHHHHHHHHHCC
Confidence 77765445566888888887777889999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
|++++++.+.+++.+++++.+.+. +|. ++++|.|++++|++||+..+.++++|++++++|+|.||+++||++
T Consensus 233 V~i~~~~~v~~v~~~~~~~~v~~~--~g~------~l~~D~vl~a~G~~pn~~~l~l~~~gl~~~~~G~i~Vd~~~~Ts~ 304 (466)
T PRK07845 233 MTVLKRSRAESVERTGDGVVVTLT--DGR------TVEGSHALMAVGSVPNTAGLGLEEAGVELTPSGHITVDRVSRTSV 304 (466)
T ss_pred cEEEcCCEEEEEEEeCCEEEEEEC--CCc------EEEecEEEEeecCCcCCCCCCchhhCceECCCCcEeECCCcccCC
Confidence 999999999999876666665553 555 799999999999999999877889999999899999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
|||||+|||++.+++++.|..||++|++|+++.. .++++..+|+++|++|+++++|+||+||++.|+++.+..+++...
T Consensus 305 ~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~vf~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~ 384 (466)
T PRK07845 305 PGIYAAGDCTGVLPLASVAAMQGRIAMYHALGEAVSPLRLKTVASNVFTRPEIATVGVSQAAIDSGEVPARTVMLPLATN 384 (466)
T ss_pred CCEEEEeeccCCccchhHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEeCCCcceeecCCHHHHHhCCCceEEEEEecccC
Confidence 9999999999999999999999999999999865 456778899999999999999999999999999999999999989
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhh
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENR 862 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~ 862 (866)
.++.+.+.+.||+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|.+.++++.+...
T Consensus 385 ~~~~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~ 462 (466)
T PRK07845 385 PRAKMSGLRDGFVKLFCRPGTGVVIGGVVVAPRASELILPIALAVQNRLTVDDLAQTFTVYPSLSGSITEAARRLMAH 462 (466)
T ss_pred chhhhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcCcCCCCCHHHHHHHHHHHhhcc
Confidence 999988888999999999999999999999999999999999999999999999999999999999999999877653
No 30
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=3e-68 Score=611.62 Aligned_cols=464 Identities=40% Similarity=0.683 Sum_probs=409.4
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|++.|||+||||||||++||.+|+++|++|+|||+. .+||+|.+.||+|+|.++..++.++.... ...+|+.
T Consensus 1 ~~~~ydvvVIG~GpaG~~aA~~aa~~G~~v~lie~~-------~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~ 72 (472)
T PRK05976 1 MAKEYDLVIIGGGPGGYVAAIRAGQLGLKTALVEKG-------KLGGTCLHKGCIPSKALLHSAEVFQTAKK-ASPFGIS 72 (472)
T ss_pred CCccccEEEECCCHHHHHHHHHHHhCCCeEEEEEcc-------CCCcceEcCCcCchHHHHHHHHHHHHHHH-HHhcCcc
Confidence 556799999999999999999999999999999984 78999999999999999999988877765 5667776
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccc--cCcccEEEEEcCCc--eEEEecEEEEecCC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKI--QNNFHEIQIINKTK--ETITAKYIIIATGS 542 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~--~~~~~~v~v~~~~g--~~i~~d~lViATGs 542 (866)
.....++|.++..+.+..++++...+..++++.+|+++.+++.+++.. +....++.+.+.+| .++.||+||||||+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~a~~i~~~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs 152 (472)
T PRK05976 73 VSGPALDFAKVQERKDGIVDRLTKGVAALLKKGKIDVFHGIGRILGPSIFSPMPGTVSVETETGENEMIIPENLLIATGS 152 (472)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeCCCCCcCCceEEEEEeCCCceEEEEcCEEEEeCCC
Confidence 555678999999999999998888888889999999999999988761 11123788876555 67999999999999
Q ss_pred CCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHH
Q psy9583 543 KARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622 (866)
Q Consensus 543 ~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~ 622 (866)
+|..+|+.+..+.+++++++...+...+++++|||||++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|+
T Consensus 153 ~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~~G~E~A~~l~~~g~~Vtli~~~~~il~~~~~~~~~~l~~~l~ 232 (472)
T PRK05976 153 RPVELPGLPFDGEYVISSDEALSLETLPKSLVIVGGGVIGLEWASMLADFGVEVTVVEAADRILPTEDAELSKEVARLLK 232 (472)
T ss_pred CCCCCCCCCCCCceEEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccCCcCCHHHHHHHHHHHH
Confidence 99877776656667888888888777889999999999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeCceEEEEEEc-CCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 623 KQGLNIILNTKIHDIKIN-KENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 623 ~~GV~i~~~~~v~~i~~~-~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
+.||++++++.+++++.. ++++.+... .+|. ..++++|.+++|+|++|+++.+.++..++..+ +|+|.||+++
T Consensus 233 ~~gI~i~~~~~v~~i~~~~~~~~~~~~~-~~g~----~~~i~~D~vi~a~G~~p~~~~l~l~~~~~~~~-~g~i~Vd~~l 306 (472)
T PRK05976 233 KLGVRVVTGAKVLGLTLKKDGGVLIVAE-HNGE----EKTLEADKVLVSVGRRPNTEGIGLENTDIDVE-GGFIQIDDFC 306 (472)
T ss_pred hcCCEEEeCcEEEEEEEecCCCEEEEEE-eCCc----eEEEEeCEEEEeeCCccCCCCCCchhcCceec-CCEEEECCCc
Confidence 999999999999999852 333333222 2442 24799999999999999998776777777764 7889999999
Q ss_pred CCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEe
Q psy9583 702 ETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFP 780 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~ 780 (866)
+|+.|+|||+|||++.+++++.|..||++||+||+|.. ..+++...|.++|++|+++++|++|+||++.|+++.+..++
T Consensus 307 ~ts~~~IyAiGD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~g~~~~~~~~~ 386 (472)
T PRK05976 307 QTKERHIYAIGDVIGEPQLAHVAMAEGEMAAEHIAGKKPRPFDYAAIPACCYTDPEVASVGLTEEEAKEAGYDVKVGKFP 386 (472)
T ss_pred ccCCCCEEEeeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCCEEEECcCceEEEeCCHHHHHHcCCCEEEEEEE
Confidence 99999999999999988999999999999999999875 66778889999999999999999999999999999999999
Q ss_pred cCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhh
Q psy9583 781 FLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE 860 (866)
Q Consensus 781 ~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 860 (866)
+....++.+.+.+.||+||++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|.+.++++.+.
T Consensus 387 ~~~~~~~~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~ 466 (472)
T PRK05976 387 FAANGKALTYGESDGFVKVVADRDTHDILGVQAVGPHVTELISEFALALELGARLWEVAGTIHPHPTLSEAIQEAALAAD 466 (472)
T ss_pred CCcchhhhhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcccCCChHHHHHHHHHHhh
Confidence 99999998888899999999999999999999999999999999999999999999999999999999999999998664
Q ss_pred hhcc
Q psy9583 861 NRSI 864 (866)
Q Consensus 861 ~~~~ 864 (866)
++.+
T Consensus 467 ~~~~ 470 (472)
T PRK05976 467 GHAL 470 (472)
T ss_pred cCcc
Confidence 4433
No 31
>KOG0558|consensus
Probab=100.00 E-value=3.5e-72 Score=556.99 Aligned_cols=378 Identities=30% Similarity=0.516 Sum_probs=324.6
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
.++|++-++||++.|.++.+|+|||||+|++.|+||||++||++++|+|.++|+|++++.+.+++..||++|..++.++.
T Consensus 64 vv~f~LsdiGEGI~Ev~vkeWfVKEGDtVeqFd~lCEVQSDKAsvtItsRydG~v~ki~h~~ddia~VGk~Lvd~eve~~ 143 (474)
T KOG0558|consen 64 VVQFKLSDIGEGIAEVTVKEWFVKEGDTVEQFDPLCEVQSDKASVTITSRYDGKVKKIYHSPDDIAKVGKPLVDLEVEDS 143 (474)
T ss_pred eEEEEhhhccccceeeeeeeehhhcCCcHHHhcchhhcccccceEEEEeeecceEEEEeeCchhhhHhCcceeeeeeccC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999987543
Q ss_pred cccc---cccc------cccccccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccccccc--cc
Q psy9583 83 KLSS---KTEI------KNKKDIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEE--KQ 151 (866)
Q Consensus 83 ~~~~---~~~~------~~~~~~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~~--~~ 151 (866)
..+. ...+ .+....+.....++|++|+||.|++|||+.| .|||.+|||.|+||++|+.+....... +.
T Consensus 144 ~ds~e~s~es~~vs~~~~~~~~~~~~~tlaTPaVRrlA~e~~idla~v-~gtGKdGRvLKeDvL~fl~q~pg~~~~~~~~ 222 (474)
T KOG0558|consen 144 QDSPEDSDESPAVSLGESKQGEESLLKTLATPAVRRLAKENGIDLAEV-TGTGKDGRVLKEDVLRFLGQVPGFVTDPSPS 222 (474)
T ss_pred cCCcccCCccccccCCCCchhhhhccccccCHHHHHHHHHhCCceEee-eccCCCCcchHHHHHHHhccCCCCccCCCCc
Confidence 2111 0000 0111222345679999999999999999999 799999999999999999764321111 11
Q ss_pred cccCCCccccc--cccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHH
Q psy9583 152 EKYKPYLDSIS--IKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFM 229 (866)
Q Consensus 152 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~ 229 (866)
..+.++.+.++ ...+-..+..+|+.+.+|+|.+.|+.+. .+|||.+.+|||+|.|+++|++++.. ++..++|+||+
T Consensus 223 ~~a~~~~~~ps~~a~~~~~~Dkt~plrGf~rAMvKtMt~al-kiPHF~y~dEIn~~sLvklr~elk~~-a~e~~IKltfm 300 (474)
T KOG0558|consen 223 EHAVIPGPSPSTKASSNLEADKTVPLRGFSRAMVKTMTEAL-KIPHFGYVDEINCDSLVKLRQELKEN-AKERGIKLTFM 300 (474)
T ss_pred eeecCCCCCCcccccCcccccceeechhHHHHHHHHHHHHh-cCCccccccccChHHHHHHHHHHhhh-hhhcCceeeeh
Confidence 11111111111 0111223568999999999999999994 68999999999999999999999865 45569999999
Q ss_pred HHHHHHHHHHHHhCCccceEEeC--CeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCc
Q psy9583 230 SFFVKAVVSALKQYPIINASVDG--NNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLP 307 (866)
Q Consensus 230 ~~~~ka~~~al~~~P~~n~~~~~--~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 307 (866)
+|++||++.||.++|.+|+++|. +.|++.-.+|||+|++|+.||+||.|+|++.+|+.||++++++|.++.+.|+|+|
T Consensus 301 Pf~iKaaSlaL~kyP~vNss~d~~~e~ii~K~sHNIgvAmdT~~GLvVPNiKN~q~~si~eIakeLnrLq~~g~~~qls~ 380 (474)
T KOG0558|consen 301 PFFIKAASLALLKYPIVNSSFDEESENIILKGSHNIGVAMDTEQGLVVPNIKNVQSLSIFEIAKELNRLQELGANGQLSP 380 (474)
T ss_pred HHHHHHHHHHHhhCccccchhhhhhhhhhhhcccceeEEecCCCceeccCccccchhhHHHHHHHHHHHHHhhhcCCcCh
Confidence 99999999999999999999986 5799999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEE-eCCeeEeeeeeeeeecccccccccchhhhhhh
Q psy9583 308 EEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIV-ENNNVVIRPINYFALSYDHRIIDGREAVLSLM 383 (866)
Q Consensus 308 ~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~-~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~ 383 (866)
+|+.|||||+||+|.+|+.+..|+|+|||+||.++|+|...|.+ ..|++....+|.++++.|||++||+..++|-.
T Consensus 381 ~D~t~GTftLSNIG~IGGtf~~P~i~~PeVAIgAlGrie~vPrFnkk~~V~~a~IM~VswsADHRViDGaTmarFsn 457 (474)
T KOG0558|consen 381 EDLTGGTFTLSNIGAIGGTFASPVIMPPEVAIGALGRIEKVPRFNKKGEVYPASIMMVSWSADHRVIDGATMARFSN 457 (474)
T ss_pred hhccCceEEeeecccccccccCcccccchhhhhhccccccccccCCCCCEEEeEEEEEEeecCceeeccHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 45889999999999999999999999876653
No 32
>PLN02507 glutathione reductase
Probab=100.00 E-value=1.9e-68 Score=612.28 Aligned_cols=451 Identities=26% Similarity=0.416 Sum_probs=397.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC--CC-cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK--DN-EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~--~~-~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
+|||+||||||||+.||.+++++|.+|+|||+.. .+ .....+||+|+|.||+|+|.+++.+...+.+.. ...+|+.
T Consensus 25 ~yDvvVIG~GpaG~~aA~~a~~~G~~V~liE~~~~~~~~~~~~~~GGtc~n~GciPsK~l~~~a~~~~~~~~-~~~~G~~ 103 (499)
T PLN02507 25 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSESIGGVGGTCVIRGCVPKKILVYGATFGGEFED-AKNYGWE 103 (499)
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCeEEEEeccCcccccccCCCccceeeccCchhHHHHHHHHHHHHHHHH-HHhcCcc
Confidence 5999999999999999999999999999999621 00 011469999999999999999999988776655 5667776
Q ss_pred cc-ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCce--EEEecEEEEecCCC
Q psy9583 467 TQ-NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIATGSK 543 (866)
Q Consensus 467 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~--~i~~d~lViATGs~ 543 (866)
.. ...++|.+++.+....+.++...+...++..+|+++.+.+.+++. +.+.+...+|+ .+.||+||||||++
T Consensus 104 ~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~i~g~a~~vd~-----~~v~V~~~~g~~~~~~~d~LIIATGs~ 178 (499)
T PLN02507 104 INEKVDFNWKKLLQKKTDEILRLNGIYKRLLANAGVKLYEGEGKIVGP-----NEVEVTQLDGTKLRYTAKHILIATGSR 178 (499)
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecC-----CEEEEEeCCCcEEEEEcCEEEEecCCC
Confidence 43 457899999999988898888888889999999999999999877 77888765653 68999999999999
Q ss_pred CcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 544 ARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
|..|+.++.+ ..+++++.+.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+|+++...+.+.|++
T Consensus 179 p~~p~ipG~~--~~~~~~~~~~l~~~~k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 256 (499)
T PLN02507 179 AQRPNIPGKE--LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRAVVARNLEG 256 (499)
T ss_pred CCCCCCCCcc--ceechHHhhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEecCCcCcccCHHHHHHHHHHHHh
Confidence 9876555432 34677888777778999999999999999999999999999999999999999999999999999999
Q ss_pred cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCC
Q psy9583 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCET 703 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~T 703 (866)
.||++++++.|++++.+++++.+.+. +|. ++++|.|++++|++||++++.++++|++++++|+|.||+++||
T Consensus 257 ~GI~i~~~~~V~~i~~~~~~~~v~~~--~g~------~i~~D~vl~a~G~~pn~~~l~l~~~gl~~~~~G~I~Vd~~~~T 328 (499)
T PLN02507 257 RGINLHPRTNLTQLTKTEGGIKVITD--HGE------EFVADVVLFATGRAPNTKRLNLEAVGVELDKAGAVKVDEYSRT 328 (499)
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEC--CCc------EEEcCEEEEeecCCCCCCCCCchhhCcEECCCCcEecCCCCcC
Confidence 99999999999999876666655543 554 7999999999999999998878899999998899999999999
Q ss_pred CCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhc-CCcEEEEEEec
Q psy9583 704 NIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKH-NISYNVGIFPF 781 (866)
Q Consensus 704 s~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~~~~~~~~~~ 781 (866)
++|||||+|||++.+.+++.|.+||++||+||++.. ...++..+|+++|+.|++++||+||+||++. +.++.+...++
T Consensus 329 s~p~IyAiGDv~~~~~l~~~A~~qg~~aa~ni~g~~~~~~~~~~~p~~if~~p~ia~vGlte~ea~~~~~~~~~~~~~~~ 408 (499)
T PLN02507 329 NIPSIWAIGDVTNRINLTPVALMEGTCFAKTVFGGQPTKPDYENVACAVFCIPPLSVVGLSEEEAVEQAKGDILVFTSSF 408 (499)
T ss_pred CCCCEEEeeEcCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCeEEECCCccEEEeCCHHHHHhccCCCEEEEEeec
Confidence 999999999999989999999999999999999754 3346778899999999999999999999987 67888888888
Q ss_pred CCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 782 ~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
....++.....+.+|+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|.+.+++
T Consensus 409 ~~~~~~~~~~~~~g~~Kli~d~~t~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~ 483 (499)
T PLN02507 409 NPMKNTISGRQEKTVMKLIVDAETDKVLGASMCGPDAPEIMQGIAVALKCGATKAQFDSTVGIHPSAAEEFVTMR 483 (499)
T ss_pred CccccccccCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcCcCCCChHHHHHHHH
Confidence 777776665567899999999999999999999999999999999999999999999999999999999998776
No 33
>PLN02546 glutathione reductase
Probab=100.00 E-value=9e-69 Score=616.17 Aligned_cols=448 Identities=23% Similarity=0.372 Sum_probs=394.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC--CC-cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK--DN-EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~--~~-~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
+|||+|||+||||+.||..|+++|.+|+|||+.. .. .....+||+|+|+||+|+|.++..++..+.+.+ ...+|+.
T Consensus 79 ~yDvvVIG~GpaG~~aA~~aa~~G~~V~liE~~~~~~~~~~~~~~GGtC~n~GCiPsK~l~~aa~~~~~~~~-~~~~g~~ 157 (558)
T PLN02546 79 DFDLFTIGAGSGGVRASRFASNFGASAAVCELPFATISSDTLGGVGGTCVLRGCVPKKLLVYASKYSHEFEE-SRGFGWK 157 (558)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCccCcccCcchHHHHHHHHHHHHHHHHHh-hhhcCcc
Confidence 5999999999999999999999999999999620 00 011468999999999999999999988877765 5677876
Q ss_pred cc-ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 467 TQ-NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 467 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
.. ...+||..+..+++..+.++...+...+++.||+++.|...+++. +++.+ +|..+.||+||||||++|.
T Consensus 158 ~~~~~~~d~~~~~~~k~~~~~~l~~~~~~~l~~~gV~~i~G~a~~vd~-----~~V~v---~G~~~~~D~LVIATGs~p~ 229 (558)
T PLN02546 158 YETEPKHDWNTLIANKNAELQRLTGIYKNILKNAGVTLIEGRGKIVDP-----HTVDV---DGKLYTARNILIAVGGRPF 229 (558)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEccC-----CEEEE---CCEEEECCEEEEeCCCCCC
Confidence 53 457899999999999999999999999999999999999999876 66766 4678999999999999998
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.|+.++. ..++++++++.+...+++++|||||++|+|+|..|.++|.+|+++++.+++++.+|+++...+++.|+++|
T Consensus 230 ~P~IpG~--~~v~~~~~~l~~~~~~k~V~VIGgG~iGvE~A~~L~~~g~~Vtlv~~~~~il~~~d~~~~~~l~~~L~~~G 307 (558)
T PLN02546 230 IPDIPGI--EHAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQKKVLRGFDEEVRDFVAEQMSLRG 307 (558)
T ss_pred CCCCCCh--hhccCHHHHHhccccCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeccccccccCHHHHHHHHHHHHHCC
Confidence 7765543 24678888887777789999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
|++++++.+.++..+++ .+.+.. .++. ...+|.|++++|++||+++|.++++|++++++|+|.||+++||+
T Consensus 308 V~i~~~~~v~~i~~~~~g~v~v~~--~~g~------~~~~D~Viva~G~~Pnt~~L~le~~gl~~d~~G~I~VD~~l~Ts 379 (558)
T PLN02546 308 IEFHTEESPQAIIKSADGSLSLKT--NKGT------VEGFSHVMFATGRKPNTKNLGLEEVGVKMDKNGAIEVDEYSRTS 379 (558)
T ss_pred cEEEeCCEEEEEEEcCCCEEEEEE--CCeE------EEecCEEEEeeccccCCCcCChhhcCCcCCCCCcEeECCCceeC
Confidence 99999999999986433 333322 2332 45589999999999999987778999999988999999999999
Q ss_pred CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCC
Q psy9583 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLA 783 (866)
Q Consensus 705 ~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~ 783 (866)
+|||||+|||++.+++++.|.+||+++|+||++.. ...++..+|+++|++|++++||+||+||++.|+++.+...++..
T Consensus 380 ~p~IYAaGDv~~~~~l~~~A~~~g~~~a~~i~g~~~~~~~~~~vp~~vft~Peia~VGlte~eA~~~g~~~~~~~~~~~~ 459 (558)
T PLN02546 380 VPSIWAVGDVTDRINLTPVALMEGGALAKTLFGNEPTKPDYRAVPSAVFSQPPIGQVGLTEEQAIEEYGDVDVFTANFRP 459 (558)
T ss_pred CCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEeCCchHhhccCCHHHHHHcCCCeEEEEEeccc
Confidence 99999999999999999999999999999999864 33567889999999999999999999999999999998888887
Q ss_pred chhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 784 NSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 784 ~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
..++...+.+.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|.+..++
T Consensus 460 ~~~~~~~~~~~g~~Klv~d~~t~~ILGa~ivG~~a~elI~~~a~ai~~~~t~~dl~~~~~~hPT~~E~~~~~~ 532 (558)
T PLN02546 460 LKATLSGLPDRVFMKLIVCAKTNKVLGVHMCGEDAPEIIQGFAVAVKAGLTKADFDATVGIHPTAAEEFVTMR 532 (558)
T ss_pred chhhhhCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHh
Confidence 7776665567899999999999999999999999999999999999999999999999999999999998776
No 34
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=3.8e-68 Score=607.91 Aligned_cols=453 Identities=38% Similarity=0.647 Sum_probs=407.5
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc--c
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ--N 469 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~--~ 469 (866)
+|+||||||||++||.+|++.|.+|+|||++ .+||+|+|.||+|+|.++..++.++.... ...+|+... .
T Consensus 2 ~vvVIG~G~aG~~aA~~~~~~g~~V~lie~~-------~~GG~c~n~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~~~ 73 (458)
T PRK06912 2 KLVVIGGGPAGYVAAITAAQNGKNVTLIDEA-------DLGGTCLNEGCMPTKSLLESAEVHDKVKK-ANHFGITLPNGS 73 (458)
T ss_pred eEEEECCCHHHHHHHHHHHhCCCcEEEEECC-------cccccCCCCccccchHHHHHHHHHHHHHH-HHhcCccccCCC
Confidence 6999999999999999999999999999985 69999999999999999999988877654 456787642 4
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~~p 548 (866)
...+|..+..+.++..+++...+..++++.+++++.|++.+++. +++.+..+++ .++.||+||||||++|+.+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~-----~~v~v~~~~~~~~~~~d~lviATGs~p~~~p 148 (458)
T PRK06912 74 ISIDWKQMQARKSQIVTQLVQGIQYLMKKNKIKVIQGKASFETD-----HRVRVEYGDKEEVVDAEQFIIAAGSEPTELP 148 (458)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEccC-----CEEEEeeCCCcEEEECCEEEEeCCCCCCCCC
Confidence 57899999999999999988888888999999999999998876 7888865444 57999999999999998777
Q ss_pred CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 549 GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
..+.+...++++.+++.+...+++++|||||++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.|++.||++
T Consensus 149 ~~~~~~~~v~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~ll~~~d~e~~~~l~~~L~~~GI~i 228 (458)
T PRK06912 149 FAPFDGKWIINSKHAMSLPSIPSSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLPGEDEDIAHILREKLENDGVKI 228 (458)
T ss_pred CCCCCCCeEEcchHHhCccccCCcEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCccccHHHHHHHHHHHHHCCCEE
Confidence 66666667888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCE
Q psy9583 629 ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNI 708 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~V 708 (866)
++++.+++++.++..+.+. . ++. ..++++|.|++|+|++|+.+.+.++..+++++++| |.||+++||++|||
T Consensus 229 ~~~~~V~~i~~~~~~v~~~--~-~g~----~~~i~~D~vivA~G~~p~~~~l~l~~~gv~~~~~g-i~Vd~~~~ts~~~V 300 (458)
T PRK06912 229 FTGAALKGLNSYKKQALFE--Y-EGS----IQEVNAEFVLVSVGRKPRVQQLNLEKAGVQFSNKG-ISVNEHMQTNVPHI 300 (458)
T ss_pred EECCEEEEEEEcCCEEEEE--E-CCc----eEEEEeCEEEEecCCccCCCCCCchhcCceecCCC-EEeCCCeecCCCCE
Confidence 9999999998765544332 2 232 23689999999999999999877788899988766 99999999999999
Q ss_pred EEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhh
Q psy9583 709 YAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRAR 788 (866)
Q Consensus 709 yA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~ 788 (866)
||+|||++.+++++.|.+||++||.||+|....+++..+|+++|++|+++++|+||+||++.|+++.+..+++....++.
T Consensus 301 yA~GD~~~~~~la~~A~~~g~~aa~~~~g~~~~~~~~~~p~~v~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~ 380 (458)
T PRK06912 301 YACGDVIGGIQLAHVAFHEGTTAALHASGEDVKVNYHAVPRCIYTSPEIASVGLTEKQAREQYGDIRIGEFPFTANGKAL 380 (458)
T ss_pred EEEeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCcCCCCeEEecCchhEEeeCCHHHHHHCCCCeEEEEEecCcchhHh
Confidence 99999999899999999999999999998776677788999999999999999999999999999999998999999999
Q ss_pred hcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 789 ILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 789 ~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
+.+.+.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.++++.+|
T Consensus 381 ~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 457 (458)
T PRK06912 381 IIGEQTGKVKVIVEPKYQEIVGISIIGPRATELIGQGTVMIHTEVTADIMEDFIAAHPTLSEAIHEALLQAVGHAVH 457 (458)
T ss_pred hcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcccCCCHHHHHHHHHHHhhcCcCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999877665443
No 35
>PTZ00153 lipoamide dehydrogenase; Provisional
Probab=100.00 E-value=3e-68 Score=617.83 Aligned_cols=461 Identities=34% Similarity=0.537 Sum_probs=400.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhh--hhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNS--FFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~--~~~~gi~~ 467 (866)
+|||+|||+|+||+.||.+++++|.+|+|||+++ +.+||+|+|.||+|+|.++..++.++.+... +..+|+..
T Consensus 116 ~yDviVIG~G~gG~~aA~~aa~~G~kV~lie~~~-----~~lGGtCvn~GCiPsK~l~~~a~~~~~~~~~~~~~~~Gi~~ 190 (659)
T PTZ00153 116 EYDVGIIGCGVGGHAAAINAMERGLKVIIFTGDD-----DSIGGTCVNVGCIPSKALLYATGKYRELKNLAKLYTYGIYT 190 (659)
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-----CccccceeEeCCcchHHHHHHHHHHHHHHhccccccCCeee
Confidence 6999999999999999999999999999999731 4799999999999999999999998877652 23567641
Q ss_pred ------------------cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCC-------cEEEEeEEEEeccccCcccEEE
Q psy9583 468 ------------------QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNK-------IKFFHGHAIFTGKIQNNFHEIQ 522 (866)
Q Consensus 468 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------V~v~~g~~v~~~~~~~~~~~v~ 522 (866)
....++|.++.++.+..++.+...+...+++.+ |++++|...+.++ +++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~vi~G~a~f~~~-----~~v~ 265 (659)
T PTZ00153 191 NAFKNGKNDPVERNQLVADTVQIDITKLKEYTQSVIDKLRGGIENGLKSKKFCKNSEHVQVIYERGHIVDK-----NTIK 265 (659)
T ss_pred ccccccccccccccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCceEEEEeEEEEecC-----CeEE
Confidence 334679999999999999999888888888775 8999999999877 7777
Q ss_pred EEcCCceEEEecEEEEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecC
Q psy9583 523 IINKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS 602 (866)
Q Consensus 523 v~~~~g~~i~~d~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~ 602 (866)
+. .++.++.||+||||||+.|..|++.+.+...++++++++.+...+++++|||||++|+|+|..|.++|.+||++++.
T Consensus 266 v~-~~g~~i~ad~lIIATGS~P~~P~~~~~~~~~V~ts~d~~~l~~lpk~VvIVGgG~iGvE~A~~l~~~G~eVTLIe~~ 344 (659)
T PTZ00153 266 SE-KSGKEFKVKNIIIATGSTPNIPDNIEVDQKSVFTSDTAVKLEGLQNYMGIVGMGIIGLEFMDIYTALGSEVVSFEYS 344 (659)
T ss_pred Ec-cCCEEEECCEEEEcCCCCCCCCCCCCCCCCcEEehHHhhhhhhcCCceEEECCCHHHHHHHHHHHhCCCeEEEEecc
Confidence 75 34578999999999999999877666666678999998888778999999999999999999999999999999999
Q ss_pred CcCCCcccHHHHHHHHHHH-HHcCCEEEeCceEEEEEEcCCe--EEEEEeeCC-CCcc------ceeEEEeccEEEEeec
Q psy9583 603 SNFLNTVDEEIAKKAFHLL-NKQGLNIILNTKIHDIKINKEN--VLINYSNKS-TNVK------TEIITSIFDKLLIAIG 672 (866)
Q Consensus 603 ~~~l~~~d~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~--~~v~~~~~~-g~~~------~~~~~~~~D~vi~a~G 672 (866)
+++++.+|+++.+.+.+.+ +++||++++++.|++++.+++. +.+.+.... +... .+..++++|.|++|+|
T Consensus 345 ~~ll~~~d~eis~~l~~~ll~~~GV~I~~~~~V~~I~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~i~aD~VlvAtG 424 (659)
T PTZ00153 345 PQLLPLLDADVAKYFERVFLKSKPVRVHLNTLIEYVRAGKGNQPVIIGHSERQTGESDGPKKNMNDIKETYVDSCLVATG 424 (659)
T ss_pred CcccccCCHHHHHHHHHHHhhcCCcEEEcCCEEEEEEecCCceEEEEEEeccccccccccccccccceEEEcCEEEEEEC
Confidence 9999999999999999976 6799999999999999876543 444443111 1100 0123799999999999
Q ss_pred cccCCCCCCccccCeeecCCCcEEeCCCCCCC------CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC--------
Q psy9583 673 RIPNTNNLNIDKIGLKVNENNFIIVNDNCETN------IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ-------- 738 (866)
Q Consensus 673 ~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts------~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~-------- 738 (866)
++||++.|+++..+++++ +|+|.||++|||+ +|+|||+|||++.+++++.|.+||++|++||++.
T Consensus 425 r~Pnt~~L~l~~~gi~~~-~G~I~VDe~lqTs~~~~~~v~~IYAiGDv~g~~~La~~A~~qg~~aa~ni~g~~~~~~~~~ 503 (659)
T PTZ00153 425 RKPNTNNLGLDKLKIQMK-RGFVSVDEHLRVLREDQEVYDNIFCIGDANGKQMLAHTASHQALKVVDWIEGKGKENVNIN 503 (659)
T ss_pred cccCCccCCchhcCCccc-CCEEeECCCCCcCCCCCCCCCCEEEEEecCCCccCHHHHHHHHHHHHHHHcCCCccccccc
Confidence 999999988888899887 5899999999997 6999999999999999999999999999999986
Q ss_pred -----CCCCCCCCccEEEEccCceeeeecCHHHHHhcCC--cEEEEEEecCCchhhhhcCC-------------------
Q psy9583 739 -----KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNI--SYNVGIFPFLANSRARILGE------------------- 792 (866)
Q Consensus 739 -----~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~--~~~~~~~~~~~~~~~~~~~~------------------- 792 (866)
...++|..+|+++|++|++++||+||+||++.++ ++.+...++..+.++...++
T Consensus 504 ~~~~~~~~~~~~~iP~~ift~PeiA~VGlTE~eA~~~g~~~~v~v~~~~~~~~~ra~~~~~~~~p~~~~~~~y~~g~~~~ 583 (659)
T PTZ00153 504 VENWASKPIIYKNIPSVCYTTPELAFIGLTEKEAKELYPPDNVGVEISFYKANSKVLCENNISFPNNSKNNSYNKGKYNT 583 (659)
T ss_pred cccccccccccCcCCEEEECcCceEEeeCCHHHHHhcCCCcceEEEEEEecccchhhhcccccccccccccccccccccc
Confidence 4456788999999999999999999999999884 46677778888888876544
Q ss_pred ---ceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhh
Q psy9583 793 ---TSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENR 862 (866)
Q Consensus 793 ---~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~ 862 (866)
+.||+|||+|+++++|||+|++|++|.|+|+.+++||++++|++||++++|+|||++|++.++++.+.+.
T Consensus 584 ~~~~~G~vKli~d~~t~rILGa~ivG~~A~elI~~~a~aI~~~~tv~dl~~~~~~hPT~sE~~~~a~~~~~~~ 656 (659)
T PTZ00153 584 VDNTEGMVKIVYLKDTKEILGMFIVGSYASILIHEGVLAINLKLSVKDLAHMVHSHPTISEVLDAAFKAIAGV 656 (659)
T ss_pred ccCCceEEEEEEECCCCeEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHHHHHHHHhh
Confidence 7899999999999999999999999999999999999999999999999999999999999999877653
No 36
>TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
Probab=100.00 E-value=1.5e-67 Score=605.32 Aligned_cols=450 Identities=30% Similarity=0.528 Sum_probs=401.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
|||+||||||||++||.+|+++|++|+|||++ .+||+|+|.||+|+|.++..++..+.... . .+|+.....
T Consensus 1 yDvvVIGaGpaG~~aA~~aa~~g~~v~lie~~-------~~GG~c~n~gciPsk~l~~~~~~~~~~~~-~-~~g~~~~~~ 71 (463)
T TIGR02053 1 YDLVIIGSGAAAFAAAIKAAELGASVAMVERG-------PLGGTCVNVGCVPSKMLLRAAEVAHYARK-P-PFGGLAATV 71 (463)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-------cccCCeeeecEEccHHHHHHHHHHHHhhc-c-CcccccCCC
Confidence 79999999999999999999999999999985 59999999999999999998888776654 2 366655556
Q ss_pred ccCHHHHHHHHHHHHHhhhh-hHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNS-GILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~~p 548 (866)
.++|.++..+.++....+.. .+..++++.+|+++.++..+.+. +++.+. ++ ..+.||+||||||+.|..|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~~-----~~v~v~--~g~~~~~~~~lIiATGs~p~~p~ 144 (463)
T TIGR02053 72 AVDFGELLEGKREVVEELRHEKYEDVLSSYGVDYLRGRARFKDP-----KTVKVD--LGREVRGAKRFLIATGARPAIPP 144 (463)
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHHhCCcEEEEEEEEEccC-----CEEEEc--CCeEEEEeCEEEEcCCCCCCCCC
Confidence 78999999999888888765 46778889999999999988765 677763 33 46899999999999998776
Q ss_pred CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 549 GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
.++.+...++++++++.....+++++|||+|.+|+|+|..|+++|.+|+++++.+++++.+++++...+++.|++.||++
T Consensus 145 i~G~~~~~~~~~~~~~~~~~~~~~vvIIGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gV~i 224 (463)
T TIGR02053 145 IPGLKEAGYLTSEEALALDRIPESLAVIGGGAIGVELAQAFARLGSEVTILQRSDRLLPREEPEISAAVEEALAEEGIEV 224 (463)
T ss_pred CCCcccCceECchhhhCcccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcCCCccCHHHHHHHHHHHHHcCCEE
Confidence 66555556788888887777789999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCE
Q psy9583 629 ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNI 708 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~V 708 (866)
+++++|++++.+++...+.+...++ ..++++|.|++|+|++|+.+.|.++..+++++++|+|.||++|||++|||
T Consensus 225 ~~~~~V~~i~~~~~~~~v~~~~~~~-----~~~i~~D~ViiA~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~Ts~~~V 299 (463)
T TIGR02053 225 VTSAQVKAVSVRGGGKIITVEKPGG-----QGEVEADELLVATGRRPNTDGLGLEKAGVKLDERGGILVDETLRTSNPGI 299 (463)
T ss_pred EcCcEEEEEEEcCCEEEEEEEeCCC-----ceEEEeCEEEEeECCCcCCCCCCccccCCEECCCCcEeECCCccCCCCCE
Confidence 9999999998776655555543222 13799999999999999999666788999999899999999999999999
Q ss_pred EEecccCCCCCcHHHHHHHHHHHHHHHhCC-CCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhh
Q psy9583 709 YAIGDVVRGPMLAHKAEEEGIMVAEHISGQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRA 787 (866)
Q Consensus 709 yA~GD~a~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~ 787 (866)
||+|||++.+.+++.|.+||++||.||++. ...+++..+|+++|++|+++++|+||++|++.|+++.+..+++..++++
T Consensus 300 yAiGD~~~~~~~~~~A~~~g~~aa~ni~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~ 379 (463)
T TIGR02053 300 YAAGDVTGGLQLEYVAAKEGVVAAENALGGANAKLDLLVIPRVVFTDPAVASVGLTEAEAQKAGIECDCRTLPLTNVPRA 379 (463)
T ss_pred EEeeecCCCcccHhHHHHHHHHHHHHhcCCCCCccCcCCCCeEEeccCceEEEeCCHHHHHhcCCCeEEEEEecccchHH
Confidence 999999999999999999999999999986 6667788899999999999999999999999999999999999999999
Q ss_pred hhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhh
Q psy9583 788 RILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIEN 861 (866)
Q Consensus 788 ~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~ 861 (866)
.+.+++.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|.++++++.+..
T Consensus 380 ~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~pt~~e~~~~a~~~~~~ 453 (463)
T TIGR02053 380 RINRDTRGFIKLVAEPGTGKVLGVQVVAPEAAEVINEAALAIRAGMTVDDLIDTLHPFPTMAEGLKLAAQTFYR 453 (463)
T ss_pred HhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcccCCChHHHHHHHHHHhhc
Confidence 98888899999999999999999999999999999999999999999999999999999999999999987643
No 37
>PRK14727 putative mercuric reductase; Provisional
Probab=100.00 E-value=1.3e-67 Score=605.64 Aligned_cols=448 Identities=25% Similarity=0.404 Sum_probs=395.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+||++|||+|+||+++|.+|++.|.+|++||++ ..+||+|+|.||+|+|.++..++..+.... ...+|+....
T Consensus 16 ~~dvvvIG~G~aG~~~a~~~~~~g~~v~~ie~~------~~~GG~c~n~GciPsk~l~~~a~~~~~~~~-~~~~g~~~~~ 88 (479)
T PRK14727 16 QLHVAIIGSGSAAFAAAIKAAEHGARVTIIEGA------DVIGGCCVNVGCVPSKILIRAAQLAHQQRS-NPFDGVEAVA 88 (479)
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEEcc------CcceeEeccccccccHHHHHHHHHHHHHhh-ccccCcccCC
Confidence 499999999999999999999999999999986 589999999999999999998887766544 3445666545
Q ss_pred cccCHHHHHHHHHHHHHhhhh-hHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNS-GILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~ 545 (866)
..++|..+..+.+....++.. .+...++.. +|+++.|...+.+. +.+.|...++ .++.||+||||||+.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~G~a~f~~~-----~~v~v~~~~g~~~~~~~d~lViATGs~p~ 163 (479)
T PRK14727 89 PSIDRGLLLHQQQARVEELRHAKYQSILDGNPALTLLKGYARFKDG-----NTLVVRLHDGGERVLAADRCLIATGSTPT 163 (479)
T ss_pred CccCHHHHHHHHHHHHHHHhhhhHHHHHhhcCCeEEEEEEEEEecC-----CEEEEEeCCCceEEEEeCEEEEecCCCCC
Confidence 578899998888888777654 356666655 99999999999876 7788876554 47999999999999998
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.|+.++.....+++..+.+.....+++++|||+|++|+|+|..|.++|.+|+++++. ++++.+|+++.+.+++.|++.|
T Consensus 164 ~p~i~G~~~~~~~~~~~~l~~~~~~k~vvVIGgG~iG~E~A~~l~~~G~~Vtlv~~~-~~l~~~d~~~~~~l~~~L~~~G 242 (479)
T PRK14727 164 IPPIPGLMDTPYWTSTEALFSDELPASLTVIGSSVVAAEIAQAYARLGSRVTILARS-TLLFREDPLLGETLTACFEKEG 242 (479)
T ss_pred CCCCCCcCccceecchHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEcC-CCCCcchHHHHHHHHHHHHhCC
Confidence 777665444456666666555567899999999999999999999999999999884 6788899999999999999999
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
|++++++++++++.+++.+.+... ++ ++++|.|++|+|+.||+.++.++.+|++++++|+|.||+++||++
T Consensus 243 V~i~~~~~V~~i~~~~~~~~v~~~--~g-------~i~aD~VlvA~G~~pn~~~l~l~~~g~~~~~~G~i~Vd~~~~Ts~ 313 (479)
T PRK14727 243 IEVLNNTQASLVEHDDNGFVLTTG--HG-------ELRAEKLLISTGRHANTHDLNLEAVGVTTDTSGAIVVNPAMETSA 313 (479)
T ss_pred CEEEcCcEEEEEEEeCCEEEEEEc--CC-------eEEeCEEEEccCCCCCccCCCchhhCceecCCCCEEECCCeecCC
Confidence 999999999999876665554432 33 688999999999999999877788899999899999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|+|||+|||++.+.+++.|..||++||.||++....+++...|+++|++|+++++|+||+||++.|+++.+..+++..++
T Consensus 314 ~~IyA~GD~~~~~~~~~~A~~~G~~aa~~i~g~~~~~~~~~~p~~~~~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~ 393 (479)
T PRK14727 314 PDIYAAGDCSDLPQFVYVAAAAGSRAGINMTGGNATLDLSAMPAVIFTDPQVATVGLSEAKAHLSGIETISRVLTMENVP 393 (479)
T ss_pred CCEEEeeecCCcchhhhHHHHHHHHHHHHHcCCCcccccccCCcEEEecCceeeeeCCHHHHHHcCCceEEEEEEcccCc
Confidence 99999999999999999999999999999999877788888999999999999999999999999999999999999888
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHh
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSI 859 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 859 (866)
++...+.+.||+|||+|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|++.++++.+
T Consensus 394 ~~~~~~~~~g~~Kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~~~~ 467 (479)
T PRK14727 394 RALANFETDGFIKLVAEEGTRKLIGAQILAHEGGELIQSAALAIHNRMTVEELADQLFPYLTMVEGLKLCAQTF 467 (479)
T ss_pred hhhhcCCCCeEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcCCccCCChHHHHHHHHHhh
Confidence 88777678999999999999999999999999999999999999999999999999999999999999998654
No 38
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=100.00 E-value=3.5e-69 Score=602.69 Aligned_cols=373 Identities=35% Similarity=0.611 Sum_probs=321.3
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ ++++||++|++|+||+|++|+|++||.|++||+|++|||||+.++++||.+|+|.++++++|+.|++|++|+.++..
T Consensus 1 M~-~~~~~P~lg~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~Ap~~G~i~~~~v~~G~~v~~G~~l~~i~~~ 79 (411)
T PRK11856 1 MM-FEFKMPDLGEGMTEGEIVEWLVKVGDTVKEGQPLAEVETDKATVEIPSPVAGTVAKLLVEEGDVVPVGSVIAVIEEE 79 (411)
T ss_pred CC-eeEecCCCCCCCceEEEEEEEeCCcCEeCCCCEEEEEEecceEEEEeCCCCeEEEEEecCCCCEeCCCCEEEEEecC
Confidence 44 68999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred Cc-ccc-c----cc----cccc-c----ccc-c---------ccccccchhHHHhhhhCCCCcccccCCCCCCCceeehh
Q psy9583 81 IS-KLS-S----KT----EIKN-K----KDI-K---------NLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKED 135 (866)
Q Consensus 81 ~~-~~~-~----~~----~~~~-~----~~~-~---------~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~D 135 (866)
++ ..+ . .. .+.+ . +.. + .....+||++|++|+++||||+.| +||||+|||+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~~r~la~~~gidl~~i-~gsG~~Gri~~~D 158 (411)
T PRK11856 80 GEAEAAAAAEAAPEAPAPEPAPAAAAAAAAAPAAAAAPAAPAAAAAKASPAVRKLARELGVDLSTV-KGSGPGGRITKED 158 (411)
T ss_pred CCCccccccCCCCCCCCCCCCCCCCCCCCCCCCcccCcccccCCcccCChHHHHHHHHcCCCHHHC-cCCCCCCeEEHHH
Confidence 33 110 0 00 0000 0 000 0 001257999999999999999999 8999999999999
Q ss_pred HHhhhhhccccccccccccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhh
Q psy9583 136 VLKVLSSIKNINEEKQEKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYK 215 (866)
Q Consensus 136 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~ 215 (866)
|++|+......+.... .+.... .+......+.+|++++||.||++|++||.++||++++.++|+|+|+++|++++
T Consensus 159 v~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~P~~~~~~~idvt~l~~~~k~~~ 233 (411)
T PRK11856 159 VEAAAAAAAPAAAAAA---AAAAAP--PAAAAEGEERVPLSGMRKAIAKRMVESKREIPHFTLTDEVDVTALLALRKQLK 233 (411)
T ss_pred HHHHHhcccccCCCCC---CCCCCC--CcccCCCceEeeCcHHHHHHHHHHHHHhhcCCeEEEEEEEEhHHHHHHHHHHH
Confidence 9999753211110000 000000 00011124678999999999999999999999999999999999999999986
Q ss_pred hHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHH
Q psy9583 216 DKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINE 295 (866)
Q Consensus 216 ~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~ 295 (866)
+. +.++||++||+||+++||++||+||++|+++++++++++|||+||++++||++|||++++++|+.+|++++++
T Consensus 234 ~~-----~~~ls~~~~~ikav~~Al~~~P~~n~~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~ 308 (411)
T PRK11856 234 AI-----GVKLTVTDFLIKAVALALKKFPELNASWDDDAIVLKKYVNIGIAVATDGGLIVPVIRDADKKSLFELAREIKD 308 (411)
T ss_pred hh-----ccCccHHHHHHHHHHHHHHhCcHhheEEeCCEEEEcCCcCEEEEEECCCCeEeCcCCCcccCCHHHHHHHHHH
Confidence 43 4799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeeccccccccc
Q psy9583 296 FINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDG 375 (866)
Q Consensus 296 ~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg 375 (866)
+++++|+|+|.++|++||||||||+||+|..+|+|+|||||+|||++|++.++|++.+|++++|++|++++++|||++||
T Consensus 309 ~~~~ar~~~l~~~~~~~gtftiSn~G~~g~~~~~Pii~~p~~ail~iG~~~~~~~~~~g~~~~~~~m~lslt~DHRviDG 388 (411)
T PRK11856 309 LAEKAREGKLKPEELQGGTFTISNLGMFGGDYFTPIINPPEVAILGVGAIVERPVVVDGEIVVRKVMPLSLSFDHRVIDG 388 (411)
T ss_pred HHHHHHcCCCCHHHhCCCeEEEeCCCccCCCceECccCCCceEEEEcccceEEEEEECCEEEEEEEEEEeEEeehhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred chhhhhhhhh
Q psy9583 376 REAVLSLMSF 385 (866)
Q Consensus 376 ~~a~~~~~~~ 385 (866)
.++++|+...
T Consensus 389 ~~aa~Fl~~l 398 (411)
T PRK11856 389 ADAARFLKAL 398 (411)
T ss_pred HHHHHHHHHH
Confidence 9999887643
No 39
>PRK14694 putative mercuric reductase; Provisional
Probab=100.00 E-value=2.2e-67 Score=603.19 Aligned_cols=448 Identities=27% Similarity=0.476 Sum_probs=393.4
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++|||+||||||||++||.+|++.|++|+|||++ .+||+|.|.||+|+|.++..++..+........+|++..
T Consensus 5 ~~~dviVIGaG~aG~~aA~~l~~~g~~v~lie~~-------~~GGtc~n~GciPsk~l~~~a~~~~~~~~~~~~~g~~~~ 77 (468)
T PRK14694 5 NNLHIAVIGSGGSAMAAALKATERGARVTLIERG-------TIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDDGLSAQ 77 (468)
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEEcc-------ccccceecCCccccHHHHHHHHHHHHHhhccccCCcccC
Confidence 4799999999999999999999999999999984 799999999999999999888877655442224577655
Q ss_pred ccccCHHHHHHHHHHHHHhhhhh-HHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSG-ILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKA 544 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p 544 (866)
...++|..++.+.++.+..+... +...++++ +|+++.+.+.+++. ..+.|...++ .++.||+||||||++|
T Consensus 78 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~g~v~~id~-----~~~~V~~~~g~~~~~~~d~lViATGs~p 152 (468)
T PRK14694 78 APVVDRSALLAQQQARVEELRESKYQSILRENAAITVLNGEARFVDE-----RTLTVTLNDGGEQTVHFDRAFIGTGARP 152 (468)
T ss_pred CCccCHHHHHHHHHHHHHHHhcccHHHHHhcCCCeEEEEEEEEEecC-----CEEEEEecCCCeEEEECCEEEEeCCCCC
Confidence 56789999999998888777553 55556554 99999999888876 5566655444 5799999999999999
Q ss_pred cCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHc
Q psy9583 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~ 624 (866)
+.|+.++.+...++++.+...+...+++++|||+|++|+|+|..|+++|.+|+++++ +++++.+++++.+.+++.|++.
T Consensus 153 ~~p~i~G~~~~~~~~~~~~~~l~~~~~~vvViG~G~~G~E~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~l~~~l~~~ 231 (468)
T PRK14694 153 AEPPVPGLAETPYLTSTSALELDHIPERLLVIGASVVALELAQAFARLGSRVTVLAR-SRVLSQEDPAVGEAIEAAFRRE 231 (468)
T ss_pred CCCCCCCCCCCceEcchhhhchhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEC-CCCCCCCCHHHHHHHHHHHHhC
Confidence 877766655555677777777767789999999999999999999999999999987 5778889999999999999999
Q ss_pred CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
||++++++.+.+++.+++.+.+.. ++. ++++|.|++|+|++||+.++.+++++++. ++|+|.||+++||+
T Consensus 232 GI~v~~~~~v~~i~~~~~~~~v~~---~~~------~i~~D~vi~a~G~~pn~~~l~l~~~g~~~-~~G~i~vd~~~~Ts 301 (468)
T PRK14694 232 GIEVLKQTQASEVDYNGREFILET---NAG------TLRAEQLLVATGRTPNTENLNLESIGVET-ERGAIRIDEHLQTT 301 (468)
T ss_pred CCEEEeCCEEEEEEEcCCEEEEEE---CCC------EEEeCEEEEccCCCCCcCCCCchhcCccc-CCCeEeeCCCcccC
Confidence 999999999999987665544433 232 69999999999999999987777888886 47899999999999
Q ss_pred CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 705 ~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
+|+|||+|||++.+.+.+.|..||++||.||++....+++..+|.++|++|++++||+||+||++.|+++.+..+++...
T Consensus 302 ~~~IyA~GD~~~~~~~~~~A~~~G~~aa~~i~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~ 381 (468)
T PRK14694 302 VSGIYAAGDCTDQPQFVYVAAAGGSRAAINMTGGDASLDLSAMPEVIFTDPQVATVGLSEAEAQAQGYDTDSRTLDLENV 381 (468)
T ss_pred CCCEEEEeecCCCcccHHHHHHHHHHHHHHhcCCCcccccCCCCeEEECCCCeEEeeCCHHHHHHcCCceEEEEEecccc
Confidence 99999999999999999999999999999999887777888899999999999999999999999999999999999999
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHh
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSI 859 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 859 (866)
+++...+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|.+.++++.+
T Consensus 382 ~~~~~~~~~~g~~klv~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~ 456 (468)
T PRK14694 382 PRALVNFDTGGFIKMVAERGSGRLLGVQVVAGEAGELIQTAVMALRARMTVNEIADELFPYLTMVEGLKLCAQTF 456 (468)
T ss_pred hhhhhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCchHHHHHHHHHhh
Confidence 998887788999999999999999999999999999999999999999999999999999999999999888754
No 40
>PTZ00058 glutathione reductase; Provisional
Probab=100.00 E-value=2.3e-67 Score=603.94 Aligned_cols=443 Identities=28% Similarity=0.452 Sum_probs=385.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+|||||+||+.||..+++.|.+|+|||++ .+||+|+|+||+|+|.++..++..+...+ ...+|+...
T Consensus 48 ~yDvvVIG~G~aG~~aA~~aa~~G~~ValIEk~-------~~GGtCln~GCiPsK~l~~~a~~~~~~~~-~~~~Gi~~~- 118 (561)
T PTZ00058 48 VYDLIVIGGGSGGMAAARRAARNKAKVALVEKD-------YLGGTCVNVGCVPKKIMFNAASIHDILEN-SRHYGFDTQ- 118 (561)
T ss_pred cccEEEECcCHHHHHHHHHHHHcCCeEEEEecc-------cccccccccCCCCCchhhhhcccHHHHHH-HHhcCCCcc-
Confidence 599999999999999999999999999999984 79999999999999999998887776654 566777633
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEE--------------------------
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQI-------------------------- 523 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v-------------------------- 523 (866)
..++|..+..+.+.++..+...+...+++.||+++.|++.+.++ +++.|
T Consensus 119 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~G~a~f~~~-----~~v~v~~~~~~~~~~~~~~~~~~~v~~~~~~ 193 (561)
T PTZ00058 119 FSFNLPLLVERRDKYIRRLNDIYRQNLKKDNVEYFEGKGSLLSE-----NQVLIKKVSQVDGEADESDDDEVTIVSAGVS 193 (561)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEecC-----CEEEeeccccccccccccccccceeeeccce
Confidence 36899999999999999998888899999999999999998875 55442
Q ss_pred EcCCceEEEecEEEEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC
Q psy9583 524 INKTKETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS 603 (866)
Q Consensus 524 ~~~~g~~i~~d~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~ 603 (866)
..+++.+++||+||||||++|..|+.++. ..++++++++.+.. +++++|||+|++|+|+|..|.++|++|+++++.+
T Consensus 194 ~~~~g~~i~ad~lVIATGS~P~~P~IpG~--~~v~ts~~~~~l~~-pk~VvIIGgG~iGlE~A~~l~~~G~~Vtli~~~~ 270 (561)
T PTZ00058 194 QLDDGQVIEGKNILIAVGNKPIFPDVKGK--EFTISSDDFFKIKE-AKRIGIAGSGYIAVELINVVNRLGAESYIFARGN 270 (561)
T ss_pred ecCCCcEEECCEEEEecCCCCCCCCCCCc--eeEEEHHHHhhccC-CCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecc
Confidence 12355689999999999999987765543 24678888877655 8999999999999999999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCc
Q psy9583 604 NFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNI 682 (866)
Q Consensus 604 ~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l 682 (866)
++++.+|+++.+.+++.|+++||+++++..+.+++.+++ ++.+.+. ++. .++++|.|++|+|++||++.+.+
T Consensus 271 ~il~~~d~~i~~~l~~~L~~~GV~i~~~~~V~~I~~~~~~~v~v~~~--~~~-----~~i~aD~VlvA~Gr~Pn~~~L~l 343 (561)
T PTZ00058 271 RLLRKFDETIINELENDMKKNNINIITHANVEEIEKVKEKNLTIYLS--DGR-----KYEHFDYVIYCVGRSPNTEDLNL 343 (561)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEecCCCcEEEEEC--CCC-----EEEECCEEEECcCCCCCccccCc
Confidence 999999999999999999999999999999999987543 3444443 221 37999999999999999999877
Q ss_pred cccCeeecCCCcEEeCCCCCCCCCCEEEecccCC----------------------------------CCCcHHHHHHHH
Q psy9583 683 DKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVR----------------------------------GPMLAHKAEEEG 728 (866)
Q Consensus 683 ~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~----------------------------------~~~~~~~A~~~g 728 (866)
+..++.. ++|+|.||+++||++|||||+|||++ .+++++.|.+||
T Consensus 344 ~~~~~~~-~~G~I~VDe~lqTs~p~IYA~GDv~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~la~~A~~~g 422 (561)
T PTZ00058 344 KALNIKT-PKGYIKVDDNQRTSVKHIYAVGDCCMVKKNQEIEDLNLLKLYNEEPYLKKKENTSGESYYNVQLTPVAINAG 422 (561)
T ss_pred cccceec-CCCeEEECcCCccCCCCEEEeEeccCccccccccccccccccccccccccccccccccccCcCchHHHHHHH
Confidence 7777654 58999999999999999999999998 578999999999
Q ss_pred HHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhc-CC-cEEEEEEecCCchhhhhc----CCceEEEEEEE
Q psy9583 729 IMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKH-NI-SYNVGIFPFLANSRARIL----GETSGMVKILS 801 (866)
Q Consensus 729 ~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~-~~~~~~~~~~~~~~~~~~----~~~~g~~kli~ 801 (866)
++||+||+|.. ...++..+|+++|++|+++++|+||+||++. |+ ++.+...++....++... +...||+|+++
T Consensus 423 ~~aa~ni~g~~~~~~~~~~ip~~vft~peiA~vGlte~eA~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~ 502 (561)
T PTZ00058 423 RLLADRLFGPFSRTTNYKLIPSVIFSHPPIGTIGLSEQEAIDIYGKENVKIYESRFTNLFFSVYDMDPAQKEKTYLKLVC 502 (561)
T ss_pred HHHHHHHhCCCCcccCCCCCCeEEeCCchheeeeCCHHHHHHhcCCCcEEEEEeecchhhhhhhcccccCCCCeEEEEEE
Confidence 99999999863 3456788999999999999999999999987 65 577777788777776543 24679999999
Q ss_pred ECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHH
Q psy9583 802 DMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAM 857 (866)
Q Consensus 802 ~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 857 (866)
++++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|++..++.
T Consensus 503 ~~~t~~ILG~~ivG~~a~elI~~~a~ai~~~~t~~dl~~~~~~hPt~~e~~~~~~~ 558 (561)
T PTZ00058 503 VGKEELIKGLHIVGLNADEILQGFAVALKMNATKADFDETIPIHPTAAEEFVTMAP 558 (561)
T ss_pred ECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhcccCCCChHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999987764
No 41
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein. This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Probab=100.00 E-value=4.7e-67 Score=598.54 Aligned_cols=456 Identities=24% Similarity=0.399 Sum_probs=394.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC-CC-cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK-DN-EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~-~~-~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||++|||+||||+.||.++++.|.+|++||+.. .+ .....+||+|+|.||+|+|.++..++..+.... ...+|+..
T Consensus 2 ~yDvvVIG~G~aG~~aA~~aa~~G~~v~lie~~~~~~~~~~~~~GGtc~n~GCiPsK~l~~~a~~~~~~~~-~~~~g~~~ 80 (484)
T TIGR01438 2 DYDLIVIGGGSGGLAAAKEAADYGAKVMLLDFVTPTPLGTRWGIGGTCVNVGCIPKKLMHQAALLGQALKD-SRNYGWNV 80 (484)
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCCcceeccccccccCcCchhHHHHHHHHHHHHhh-hhhcCccc
Confidence 4899999999999999999999999999999741 00 111258999999999999999999888776654 55667765
Q ss_pred cc-cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCC
Q psy9583 468 QN-VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKA 544 (866)
Q Consensus 468 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p 544 (866)
.. ..++|.++..+.+..+..+...+..+++..+|+++.|...++++ +++.+...++ .++.||+||||||++|
T Consensus 81 ~~~~~~d~~~~~~~~~~~v~~~~~~~~~~~~~~~v~~i~G~a~f~~~-----~~v~v~~~~g~~~~~~~d~lVIATGs~p 155 (484)
T TIGR01438 81 EETVKHDWNRLSEAVQNHIGSLNWGYRVALREKKVNYENAYAEFVDK-----HRIKATNKKGKEKIYSAERFLIATGERP 155 (484)
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCC-----CEEEEeccCCCceEEEeCEEEEecCCCC
Confidence 44 57899999999999999998888889999999999999999887 7888864333 5799999999999999
Q ss_pred cCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHc
Q psy9583 545 RSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~ 624 (866)
+.|+.++.. ...+++++++.+...+++++|||||++|+|+|..|+++|.+|+++.+ +.+++.+|+++.+.+++.|+++
T Consensus 156 ~~p~ipG~~-~~~~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~-~~~l~~~d~~~~~~l~~~L~~~ 233 (484)
T TIGR01438 156 RYPGIPGAK-ELCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFDQDCANKVGEHMEEH 233 (484)
T ss_pred CCCCCCCcc-ceeecHHHhhcccccCCCEEEECCCHHHHHHHHHHHHhCCcEEEEEe-cccccccCHHHHHHHHHHHHHc
Confidence 877655432 34578888888777889999999999999999999999999999998 5788999999999999999999
Q ss_pred CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecC-CCcEEeCCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNE-NNFIIVNDNCET 703 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-~G~i~Vd~~l~T 703 (866)
||++++++.+.+++..++.+.+.+. ++. +..++++|.|++|+|++||++++.+++.|+++++ +|+|.||+++||
T Consensus 234 gV~i~~~~~v~~v~~~~~~~~v~~~--~~~---~~~~i~~D~vl~a~G~~pn~~~l~l~~~gv~~~~~~G~I~Vd~~~~T 308 (484)
T TIGR01438 234 GVKFKRQFVPIKVEQIEAKVKVTFT--DST---NGIEEEYDTVLLAIGRDACTRKLNLENVGVKINKKTGKIPADEEEQT 308 (484)
T ss_pred CCEEEeCceEEEEEEcCCeEEEEEe--cCC---cceEEEeCEEEEEecCCcCCCcCCcccccceecCcCCeEecCCCccc
Confidence 9999999999999876666666664 221 0137999999999999999999888999999975 489999999999
Q ss_pred CCCCEEEecccCC-CCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhc-CC-cEEEEEE
Q psy9583 704 NIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKH-NI-SYNVGIF 779 (866)
Q Consensus 704 s~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~-~~~~~~~ 779 (866)
++|+|||+|||+. .+++++.|.+||+++|+||++.. ...++..+|+++|++|++++||+||+||++. ++ .+.+...
T Consensus 309 s~p~IyA~GDv~~~~~~l~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~i~~~p~ia~vGlte~~a~~~~g~~~~~~~~~ 388 (484)
T TIGR01438 309 NVPYIYAVGDILEDKQELTPVAIQAGRLLAQRLFSGSTVICDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVFHS 388 (484)
T ss_pred CCCCEEEEEEecCCCccchHHHHHHHHHHHHHHhcCCCcccccccCCeEEeCCCceeeecCCHHHHHHhcCCCcEEEEEe
Confidence 9999999999996 67899999999999999999753 3456778999999999999999999999987 55 5777777
Q ss_pred ecCCchhhhhcCC--ceEEEEEEEE-CCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 780 PFLANSRARILGE--TSGMVKILSD-MKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 780 ~~~~~~~~~~~~~--~~g~~kli~~-~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
++....++....+ +.+|+|++++ +++++|||+|++|++|.|+|+.+++||++++|++||++++|+|||++|++.+++
T Consensus 389 ~~~~~~~~~~~~~~~~~g~~Kli~~~~~t~~ILG~~ivg~~a~e~I~~~a~ai~~~~t~~dl~~~~~~hPt~sE~~~~~~ 468 (484)
T TIGR01438 389 YFWPLEWTIPSRDNSNKCYAKAVCNRKENERVVGFHVVGPNAGEVTQGFAAALRCGLTKKDLDNTIGIHPVCAEVFTTLS 468 (484)
T ss_pred ecchhhhHhhCCCccCCcEEEEEEecCCCCeEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhhhcCCCChHHHHHHhh
Confidence 8877777766554 6799999996 468999999999999999999999999999999999999999999999999988
Q ss_pred HH
Q psy9583 857 MS 858 (866)
Q Consensus 857 ~~ 858 (866)
+.
T Consensus 469 ~~ 470 (484)
T TIGR01438 469 VT 470 (484)
T ss_pred hh
Confidence 66
No 42
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=100.00 E-value=1.2e-66 Score=598.34 Aligned_cols=452 Identities=39% Similarity=0.629 Sum_probs=399.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+||||||||++||.+|++.|++|+|||++ .+||+|.+.||+|+|.++..+...+.... +..+|+....
T Consensus 3 ~yDvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-------~~GG~~~~~gc~psk~l~~~~~~~~~~~~-~~~~gi~~~~ 74 (460)
T PRK06292 3 KYDVIVIGAGPAGYVAARRAAKLGKKVALIEKG-------PLGGTCLNVGCIPSKALIAAAEAFHEAKH-AEEFGIHADG 74 (460)
T ss_pred cccEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-------ccccceeccceeeHHHHHHHHHHHHHHHH-HHhcCCCcCC
Confidence 599999999999999999999999999999984 79999999999999999998888776655 5667776554
Q ss_pred cccCHHHHHHHHHHHHHhhhhhH-HHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGI-LFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSF 547 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~ 547 (866)
..++|..+..+.+.....+...+ ...++..+++++.+...+++. +.+.+ ++.++.||+||||||+. |..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~-----~~v~v---~~~~~~~d~lIiATGs~~p~i- 145 (460)
T PRK06292 75 PKIDFKKVMARVRRERDRFVGGVVEGLEKKPKIDKIKGTARFVDP-----NTVEV---NGERIEAKNIVIATGSRVPPI- 145 (460)
T ss_pred CccCHHHHHHHHHHHHHHHhcchHHHHHhhCCCEEEEEEEEEccC-----CEEEE---CcEEEEeCEEEEeCCCCCCCC-
Confidence 67899999999888888777666 667788899999999888766 66666 45789999999999998 543
Q ss_pred CCCc-CCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 548 PGVK-FDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 548 p~~~-~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
|+.. .....++++++.+.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++...+++.|+++ |
T Consensus 146 pg~~~~~~~~~~~~~~~~~~~~~~k~v~VIGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~-I 224 (460)
T PRK06292 146 PGVWLILGDRLLTSDDAFELDKLPKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEDPEVSKQAQKILSKE-F 224 (460)
T ss_pred CCCcccCCCcEECchHHhCccccCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcchhHHHHHHHHHHHhhc-c
Confidence 3321 1344577888888777789999999999999999999999999999999999999999999999999999999 9
Q ss_pred EEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
++++++.+.+++.+++ .+.+... ++. ..++++|.+++|+|++||++.+.++.++++++++|+|.||+++||++
T Consensus 225 ~i~~~~~v~~i~~~~~~~v~~~~~--~~~----~~~i~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~g~i~vd~~~~ts~ 298 (460)
T PRK06292 225 KIKLGAKVTSVEKSGDEKVEELEK--GGK----TETIEADYVLVATGRRPNTDGLGLENTGIELDERGRPVVDEHTQTSV 298 (460)
T ss_pred EEEcCCEEEEEEEcCCceEEEEEc--CCc----eEEEEeCEEEEccCCccCCCCCCcHhhCCEecCCCcEeECCCcccCC
Confidence 9999999999987654 3443322 232 24799999999999999999877888999999899999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC-CCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
|+|||+|||++.+++++.|..||++||.||++. ...+++..+|+.+|++|+++++|+||+||++.|+++.+..+++..+
T Consensus 299 ~~IyA~GD~~~~~~~~~~A~~qg~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~ 378 (460)
T PRK06292 299 PGIYAAGDVNGKPPLLHEAADEGRIAAENAAGDVAGGVRYHPIPSVVFTDPQIASVGLTEEELKAAGIDYVVGEVPFEAQ 378 (460)
T ss_pred CCEEEEEecCCCccchhHHHHHHHHHHHHhcCCCCCCcCCCCCCeEEECCCccEEeECCHHHHHhcCCCeEEEEEecccc
Confidence 999999999998899999999999999999984 4556778899999999999999999999999999999999999999
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhcc
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSI 864 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 864 (866)
.|+.+.+++.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|++.++++.+..+.+
T Consensus 379 ~~~~~~~~~~g~~klv~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~ 458 (460)
T PRK06292 379 GRARVMGKNDGFVKVYADKKTGRLLGAHIIGPDAEHLIHLLAWAMQQGLTVEDLLRMPFYHPTLSEGLRTALRDLFSKLI 458 (460)
T ss_pred hHHHhcCCCCeEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCccCCCCHHHHHHHHHHHHhhhhc
Confidence 99998888899999999999999999999999999999999999999999999999999999999999999988776654
Q ss_pred C
Q psy9583 865 N 865 (866)
Q Consensus 865 ~ 865 (866)
+
T Consensus 459 ~ 459 (460)
T PRK06292 459 H 459 (460)
T ss_pred C
Confidence 3
No 43
>KOG0559|consensus
Probab=100.00 E-value=2.7e-70 Score=546.98 Aligned_cols=362 Identities=46% Similarity=0.710 Sum_probs=294.8
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
.+++..|.++|+++||+|.+|++++||.|+++|.|++|||||.+++|+||.+|+|.++++++||+|.+|+.|+.|+...+
T Consensus 72 ~vtv~vP~faESiteG~l~~~lK~~Gd~v~~DE~va~IETDK~tv~V~sP~sGvi~e~lvk~gdtV~~g~~la~i~~gaA 151 (457)
T KOG0559|consen 72 VVTVEVPPFAESITEGDLAQWLKKVGDRVNEDEAVAEIETDKTTVEVPSPASGVITELLVKDGDTVTPGQKLAKISPGAA 151 (457)
T ss_pred eeEEecCCcccccccchHHHHhhCcccccccchhheeeeccceeeeccCCCcceeeEEecCCCCcccCCceeEEecCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999987543
Q ss_pred cccccccccccccccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccccccc--------ccccc
Q psy9583 83 KLSSKTEIKNKKDIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEE--------KQEKY 154 (866)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~~--------~~~~~ 154 (866)
.+.+....++++.++..+..++|. +-+.+ + . +-.++ .+ .++.+..+.. ++...
T Consensus 152 pa~~~~~apa~~~pk~~~a~~a~p--~~~s~---~---~-p~~~a-------pv---~e~p~~p~~~~P~~~~a~k~~v~ 212 (457)
T KOG0559|consen 152 PAKGGASAPAKAEPKTAPAAAAPP--KPSSK---P---P-PKEAA-------PV---AESPPAPSSPEPVPASAKKPSVA 212 (457)
T ss_pred CccccccCCCccCCCCCCCCCCCC--CccCC---C---C-ccccC-------CC---CCCCCCCCCCCCCCccccCcccc
Confidence 222111111100110000001100 00000 0 0 00000 00 0000000000 00000
Q ss_pred CCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHH
Q psy9583 155 KPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVK 234 (866)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~k 234 (866)
.+...+......++.+.+++|++||+.||.++.+|.++...+|.|.|+||++|+++|++++++|-+++|+|+.|+.+|+|
T Consensus 213 ~~~~~p~~~~~~~R~E~RVkMnRmR~RIA~RLKdsQNt~A~LTTFNEvDMS~lm~mRk~ykdaf~kKhGvKlGfMs~F~K 292 (457)
T KOG0559|consen 213 QPKPPPSEGATPSRSERRVKMNRMRLRIAERLKDSQNTAAMLTTFNEVDMSNLMEMRKQYKDAFLKKHGVKLGFMSGFSK 292 (457)
T ss_pred CCCCCcccccCCCcchhhhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhCceeeehhHHHH
Confidence 01111111111245678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCccceEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCce
Q psy9583 235 AVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGT 314 (866)
Q Consensus 235 a~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt 314 (866)
|++.||++.|.+|+.+||+.|++++.+||+|||+|++||+||||||++.|++.||-.++..|..|||+|+|.-+||.|||
T Consensus 293 A~~~Alq~qPvVNavIdg~~iVYRDyvDISvAVaTpkGLVvPViRnae~Mn~adIE~~i~~L~~KAr~g~laiedM~gGT 372 (457)
T KOG0559|consen 293 AAAYALQDQPVVNAVIDGDDIVYRDYVDISVAVATPKGLVVPVIRNAESMNFADIEKTIAGLGKKARDGKLAIEDMAGGT 372 (457)
T ss_pred HHHHHhhhCcceeeeecCCeeEEeecceeEEEeecCCceeeeeecccccccHHHHHHHHHHHHHhhccCceeeeeccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhh
Q psy9583 315 FTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLM 383 (866)
Q Consensus 315 ~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~ 383 (866)
|||||-|.||..+.||||||||+||||+.+|.+||++.+|++++||+||+.|+||||++||+++..|+.
T Consensus 373 FTISNGGVfGSL~gTPIINpPQsAILGmHgI~eRPv~v~G~Vv~RPMMYvALTYDHRliDGREAVtFLr 441 (457)
T KOG0559|consen 373 FTISNGGVFGSLYGTPIINPPQSAILGMHGIKERPVVVGGQVVPRPMMYVALTYDHRLIDGREAVTFLR 441 (457)
T ss_pred EEEeCCcEeeeeccCcccCCchhhhhhcccccccceeeCCEeeeccceEEEeeccccccccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999987764
No 44
>PRK13748 putative mercuric reductase; Provisional
Probab=100.00 E-value=4.1e-66 Score=608.24 Aligned_cols=448 Identities=27% Similarity=0.442 Sum_probs=393.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.|||+||||||||++||.+|++.|++|+|||++ .+||+|+|.||+|+|.++..++..+........+|+....
T Consensus 98 ~~DvvVIG~GpaG~~aA~~~~~~G~~v~lie~~-------~~GG~c~n~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~ 170 (561)
T PRK13748 98 PLHVAVIGSGGAAMAAALKAVEQGARVTLIERG-------TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATV 170 (561)
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCeEEEEecC-------cceeeccccCccccHHHHHHHHHHHHHhcccccCCccCCC
Confidence 599999999999999999999999999999984 7999999999999999998888776654421124665445
Q ss_pred cccCHHHHHHHHHHHHHhhhh-hHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNS-GILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~ 545 (866)
...+|.++..+.+..+..+.. .+...+++. +|+++.+.+.+.+. +.+.+...++ ..+.||+||||||++|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~-----~~~~v~~~~g~~~~~~~d~lviAtGs~p~ 245 (561)
T PRK13748 171 PTIDRSRLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDD-----QTLIVRLNDGGERVVAFDRCLIATGASPA 245 (561)
T ss_pred CccCHHHHHHHHHHHHHHHhcccHHHHHhccCCeEEEEEEEEEecC-----CEEEEEeCCCceEEEEcCEEEEcCCCCCC
Confidence 568999999988888877765 355666666 89999999988876 7777765444 47999999999999998
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.|+.++.....+++..+.+.....+++++|||+|++|+|+|..|.++|.+|+++++. .+++.+|+++...+++.|++.|
T Consensus 246 ~p~i~g~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtli~~~-~~l~~~d~~~~~~l~~~l~~~g 324 (561)
T PRK13748 246 VPPIPGLKETPYWTSTEALVSDTIPERLAVIGSSVVALELAQAFARLGSKVTILARS-TLFFREDPAIGEAVTAAFRAEG 324 (561)
T ss_pred CCCCCCCCccceEccHHHhhcccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecC-ccccccCHHHHHHHHHHHHHCC
Confidence 776665554456776666666667899999999999999999999999999999985 5677789999999999999999
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
|++++++.+++++.+++.+.+... ++ ++++|.|++|+|++||+.++.+++.|++++++|+|.||+++||++
T Consensus 325 I~i~~~~~v~~i~~~~~~~~v~~~--~~-------~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~g~i~vd~~~~Ts~ 395 (561)
T PRK13748 325 IEVLEHTQASQVAHVDGEFVLTTG--HG-------ELRADKLLVATGRAPNTRSLALDAAGVTVNAQGAIVIDQGMRTSV 395 (561)
T ss_pred CEEEcCCEEEEEEecCCEEEEEec--CC-------eEEeCEEEEccCCCcCCCCcCchhcCceECCCCCEeECCCcccCC
Confidence 999999999999876655544332 22 689999999999999999877789999999899999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|||||+|||++.+.+++.|..||++||.||+|....+++...|+++|++|+++++|+||+||++.|+++.+..+++....
T Consensus 396 ~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~ 475 (561)
T PRK13748 396 PHIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVP 475 (561)
T ss_pred CCEEEeeecCCCccchhHHHHHHHHHHHHHcCCCcccCCCCCCeEEEccCCceeeeCCHHHHHHcCCCeEEEEEecccCc
Confidence 99999999999999999999999999999998777788888999999999999999999999999999999999998888
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHh
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSI 859 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 859 (866)
++...+++.||+||++|+++++|||+|++|+++.|+|+.+++||++++|++||..++|+|||++|.+.++++..
T Consensus 476 ~~~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~ 549 (561)
T PRK13748 476 RALANFDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTF 549 (561)
T ss_pred hhhhcCCCCeEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcccccCCchHHHHHHHHHHh
Confidence 88777678999999999999999999999999999999999999999999999999999999999999988654
No 45
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=100.00 E-value=1.4e-65 Score=585.19 Aligned_cols=432 Identities=28% Similarity=0.483 Sum_probs=376.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.|||+||||||||++||.+|+++|++|+|||+.+ ..+||+|.+.||+|+|.+......
T Consensus 3 ~yDvvVIGgGpaGl~aA~~la~~g~~V~lie~~~-----~~~GG~~~~~gcip~k~l~~~~~~----------------- 60 (441)
T PRK08010 3 KYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSN-----AMYGGTCINIGCIPTKTLVHDAQQ----------------- 60 (441)
T ss_pred cCCEEEECCCHhHHHHHHHHHHCCCeEEEEcCCC-----CccceeEeeccccchHHHHHHhcc-----------------
Confidence 5999999999999999999999999999999862 258999999999999877643321
Q ss_pred cccCHHHHHHHHHHHHHhhhhhH-HHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGI-LFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARSF 547 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~~ 547 (866)
..+|.....+.+..+..+.... ..+.+..+++++.+...+++. +.+.+.+.++ .++.||+||||||++|..|
T Consensus 61 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~-----~~~~v~~~~g~~~~~~d~lviATGs~p~~p 134 (441)
T PRK08010 61 -HTDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINN-----HSLRVHRPEGNLEIHGEKIFINTGAQTVVP 134 (441)
T ss_pred -CCCHHHHHHHHHHHHHHHHHhHHHHHhhcCCcEEEEEEEEEecC-----CEEEEEeCCCeEEEEeCEEEEcCCCcCCCC
Confidence 2467776766666655554333 333344599999999888876 7777776566 4799999999999999877
Q ss_pred CCCcCC-CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 548 PGVKFD-ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 548 p~~~~~-~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
+.++.. ...++++.+++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.|+++||
T Consensus 135 ~i~G~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gV 214 (441)
T PRK08010 135 PIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGV 214 (441)
T ss_pred CCCCccCCCCEEChhHhhcccccCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCHHHHHHHHHHHHhCCC
Confidence 655532 2457788878777778899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIP 706 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~ 706 (866)
++++++.+++++.+++.+.+.. .++ ++.+|.|++|+|++||++++.++++|++++++|+|.||+++||++|
T Consensus 215 ~v~~~~~v~~i~~~~~~v~v~~--~~g-------~i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~vd~~~~Ts~~ 285 (441)
T PRK08010 215 DIILNAHVERISHHENQVQVHS--EHA-------QLAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKYLHTTAD 285 (441)
T ss_pred EEEeCCEEEEEEEcCCEEEEEE--cCC-------eEEeCEEEEeecCCcCCCCcCchhcCcEECCCCcEEECCCcccCCC
Confidence 9999999999987665554433 233 5789999999999999998777889999988899999999999999
Q ss_pred CEEEecccCCCCCcHHHHHHHHHHHHHHHhCC-CC-CCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 707 NIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ-KH-SINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 707 ~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~-~~-~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
||||+|||++.+++.+.|..||+++++||+|. .. ..++..+|+++|++|+++++|+||+||++.|+++.+..+++...
T Consensus 286 ~IyA~GD~~~~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~ 365 (441)
T PRK08010 286 NIWAMGDVTGGLQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTLPVAAI 365 (441)
T ss_pred CEEEeeecCCCccchhHHHHHHHHHHHHHcCCCCcccCccCCCCEEEECCCCceeeeCCHHHHHHcCCCeEEEEEecCcC
Confidence 99999999999999999999999999999985 32 34667899999999999999999999999999999999999999
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHH
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMS 858 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 858 (866)
+++.+.+++.||+||++|+++++|||+|++|+++.|+|+.++++|++++|++||.+.+++|||++|.+.+++..
T Consensus 366 ~~~~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 439 (441)
T PRK08010 366 PRARVMNDTRGVLKAIVDNKTQRILGASLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDLFSL 439 (441)
T ss_pred hhhhhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhccccCCchHHHHHHHHHh
Confidence 99999888899999999999999999999999999999999999999999999999999999999999988764
No 46
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Probab=100.00 E-value=7.4e-65 Score=583.90 Aligned_cols=454 Identities=47% Similarity=0.786 Sum_probs=409.5
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
|||+||||||||++||.+|++.|++|+|||+ +.+||+|.+.||+|+|.+....+.++.+.. ...+++.....
T Consensus 2 yDvvVIG~G~aGl~aA~~la~~G~~v~lie~-------~~~GG~~~~~gc~Psk~l~~~~~~~~~~~~-~~~~g~~~~~~ 73 (461)
T TIGR01350 2 YDVVVIGGGPGGYVAAIRAAQLGLKVALVEK-------EYLGGTCLNVGCIPTKALLHSAEVYDEIKH-AKDYGIEVENV 73 (461)
T ss_pred ccEEEECCCHHHHHHHHHHHhCCCeEEEEec-------CCCCCceeecCccchHHHHHHhhHHHHHHH-HHhcCCCCCCC
Confidence 8999999999999999999999999999998 379999999999999999998888877764 66777765556
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~~p~ 549 (866)
.++|..+..+.+...+++...+..++++.+++++.++..+.+. +.+.+...++ .++.||+||||||+.|+.+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~-----~~~~v~~~~g~~~~~~d~lVlAtG~~p~~~~~ 148 (461)
T TIGR01350 74 SVDWEKMQKRKNKVVKKLVGGVKGLLKKNKVTVIKGEAKFLDP-----GTVLVTGENGEETLTAKNIIIATGSRPRSLPG 148 (461)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CEEEEecCCCcEEEEeCEEEEcCCCCCCCCCC
Confidence 7899999999888888888888889999999999999988766 7777876544 589999999999999987776
Q ss_pred C-cCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 550 V-KFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 550 ~-~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
+ +.....++++++...+...+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++.+++++...+.+.|++.||++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~l~~~gi~i 228 (461)
T TIGR01350 149 PFDFDGEVVITSTGALNLKEVPESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRILPGEDAEVSKVVAKALKKKGVKI 228 (461)
T ss_pred CCCCCCceEEcchHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 3 545556888888888777889999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCE
Q psy9583 629 ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNI 708 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~V 708 (866)
++++.+.+++.+++++.+... +|. ..++++|.+++|+|++|+...+.+++.+++++.+|+|.||+++||++|+|
T Consensus 229 ~~~~~v~~i~~~~~~v~v~~~--~g~----~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~l~t~~~~I 302 (461)
T TIGR01350 229 LTNTKVTAVEKNDDQVVYENK--GGE----TETLTGEKVLVAVGRKPNTEGLGLENLGVELDERGRIVVDEYMRTNVPGI 302 (461)
T ss_pred EeCCEEEEEEEeCCEEEEEEe--CCc----EEEEEeCEEEEecCCcccCCCCCcHhhCceECCCCcEeeCCCcccCCCCE
Confidence 999999999877666665543 342 23799999999999999998655788999999899999999999999999
Q ss_pred EEecccCCCCCcHHHHHHHHHHHHHHHhCCCC-CCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhh
Q psy9583 709 YAIGDVVRGPMLAHKAEEEGIMVAEHISGQKH-SINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRA 787 (866)
Q Consensus 709 yA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~ 787 (866)
||+|||++.+++++.|.+||+.||+||++... .+++...|.+.|++|+++++|+++++|++.|+++.+...++....++
T Consensus 303 yaiGD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~ 382 (461)
T TIGR01350 303 YAIGDVIGGPMLAHVASHEGIVAAENIAGKEPAPIDYDAVPSCIYTDPEVASVGLTEEQAKEAGYDVKIGKFPFAANGKA 382 (461)
T ss_pred EEeeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCCeEEecCCceEEEeCCHHHHHhCCCCeEEEEEeCccchHH
Confidence 99999999899999999999999999998754 67778899999999999999999999999999999999999888899
Q ss_pred hhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhc
Q psy9583 788 RILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRS 863 (866)
Q Consensus 788 ~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~ 863 (866)
.+.+.+.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|.++++++.++.+.
T Consensus 383 ~~~~~~~g~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~ 458 (461)
T TIGR01350 383 LALGETDGFVKIIADKKTGEILGAHIIGPHATELISEAVLAMELELTVEELAKTIHPHPTLSEAIKEAALAALGKP 458 (461)
T ss_pred HhcCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcccCCCHHHHHHHHHHHhccCc
Confidence 8888889999999999999999999999999999999999999999999999999999999999999998775543
No 47
>PTZ00052 thioredoxin reductase; Provisional
Probab=100.00 E-value=6e-65 Score=584.12 Aligned_cols=453 Identities=28% Similarity=0.439 Sum_probs=382.4
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC--CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD--NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYG 464 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~--~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~g 464 (866)
|+.+|||+||||||||++||.+|+++|.+|+|||+.+. ......+||+|+|.||+|+|.++..+...+...+....+|
T Consensus 2 ~~~~yDviVIG~GpaG~~AA~~aa~~G~~V~lie~~~~~~~~~~~~~GG~C~n~gciPsK~l~~~a~~~~~~~~~~~~~g 81 (499)
T PTZ00052 2 LTFMYDLVVIGGGSGGMAAAKEAAAHGKKVALFDYVKPSTQGTKWGLGGTCVNVGCVPKKLMHYAANIGSIFHHDSQMYG 81 (499)
T ss_pred CccccCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCCCCccccccccceeccccccchHHHHHHHHHHHHHHhHHhcCC
Confidence 33359999999999999999999999999999996310 0011258999999999999999988888776654345677
Q ss_pred ccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCC-ceEEEecEEEEecCCC
Q psy9583 465 INTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKT-KETITAKYIIIATGSK 543 (866)
Q Consensus 465 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~-g~~i~~d~lViATGs~ 543 (866)
+.... ..+|.++..+.+..++.+...+...++..+|+++.+.+.+.+. +++.+...+ +..+.||+||||||+.
T Consensus 82 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~a~~~~~-----~~v~v~~~~~~~~i~~d~lIIATGs~ 155 (499)
T PTZ00052 82 WKTSS-SFNWGKLVTTVQNHIRSLNFSYRTGLRSSKVEYINGLAKLKDE-----HTVSYGDNSQEETITAKYILIATGGR 155 (499)
T ss_pred CCCCC-CcCHHHHHHHHHHHHHHhhHHHHHHhhhcCcEEEEEEEEEccC-----CEEEEeeCCCceEEECCEEEEecCCC
Confidence 76544 7899999999999988887777777888899999999988766 778775432 3679999999999999
Q ss_pred CcCCC-CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHH
Q psy9583 544 ARSFP-GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622 (866)
Q Consensus 544 p~~~p-~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~ 622 (866)
|+.|+ .++. ....+++++++.+...+++++|||+|++|+|+|..|+++|.+||++++ +.+++.+|+++.+.+++.|+
T Consensus 156 p~~p~~i~G~-~~~~~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~-~~~l~~~d~~~~~~l~~~l~ 233 (499)
T PTZ00052 156 PSIPEDVPGA-KEYSITSDDIFSLSKDPGKTLIVGASYIGLETAGFLNELGFDVTVAVR-SIPLRGFDRQCSEKVVEYMK 233 (499)
T ss_pred CCCCCCCCCc-cceeecHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEc-CcccccCCHHHHHHHHHHHH
Confidence 98664 3332 234578888887777789999999999999999999999999999987 46778899999999999999
Q ss_pred HcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCC
Q psy9583 623 KQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE 702 (866)
Q Consensus 623 ~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~ 702 (866)
+.||++++++.+.+++..++.+.+.+. +|. ++++|.|++++|++||++++.++.++++++++|++.++++ +
T Consensus 234 ~~GV~i~~~~~v~~v~~~~~~~~v~~~--~g~------~i~~D~vl~a~G~~pn~~~l~l~~~g~~~~~~G~ii~~~~-~ 304 (499)
T PTZ00052 234 EQGTLFLEGVVPINIEKMDDKIKVLFS--DGT------TELFDTVLYATGRKPDIKGLNLNAIGVHVNKSNKIIAPND-C 304 (499)
T ss_pred HcCCEEEcCCeEEEEEEcCCeEEEEEC--CCC------EEEcCEEEEeeCCCCCccccCchhcCcEECCCCCEeeCCC-c
Confidence 999999999999999876555555553 555 6899999999999999999877899999998998877777 9
Q ss_pred CCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhc-C-CcEEEEE
Q psy9583 703 TNIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKH-N-ISYNVGI 778 (866)
Q Consensus 703 Ts~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~-~~~~~~~ 778 (866)
|++|+|||+|||++ .+.+++.|.+||+++|+||++.. ...++..+|+++|++|++++||+||+||++. + .++.+..
T Consensus 305 Ts~p~IyAiGDv~~~~~~l~~~A~~~g~~aa~ni~g~~~~~~~~~~~p~~ift~p~ia~vGlte~~A~~~~~~~~~~~~~ 384 (499)
T PTZ00052 305 TNIPNIFAVGDVVEGRPELTPVAIKAGILLARRLFKQSNEFIDYTFIPTTIFTPIEYGACGYSSEAAIAKYGEDDIEEYL 384 (499)
T ss_pred CCCCCEEEEEEecCCCcccHHHHHHHHHHHHHHHhCCCCCcCccccCCeEEecCCcceeecCCHHHHHHhcCCCCEEEEE
Confidence 99999999999995 67899999999999999999854 3456788999999999999999999999988 4 4688877
Q ss_pred EecCCchhhhhcC---------------CceEEEEEEEEC-CCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHcccc
Q psy9583 779 FPFLANSRARILG---------------ETSGMVKILSDM-KSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARIC 842 (866)
Q Consensus 779 ~~~~~~~~~~~~~---------------~~~g~~kli~~~-~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~ 842 (866)
.++....++.... ++.||+||++++ ++++|||+|++|++|+|+|+.+++||++++|++||++++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~IlG~~ivg~~A~elI~~~~~ai~~~~t~~~l~~~~ 464 (499)
T PTZ00052 385 QEFNTLEIAAVHREKHERARKDEYDFDVSSNCLAKLVCVKSEDNKVVGFHFVGPNAGEITQGFSLALKLGAKKSDFDSMI 464 (499)
T ss_pred eecccchhhccccccccccccccccccccCCceEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccc
Confidence 7776544333211 268999999997 489999999999999999999999999999999999999
Q ss_pred ccCCChhHHHHHHH
Q psy9583 843 HVHPSLSEAMKEAA 856 (866)
Q Consensus 843 ~~~Pt~~e~~~~~~ 856 (866)
|+|||++|++.++.
T Consensus 465 ~~hPt~sE~~~~~~ 478 (499)
T PTZ00052 465 GIHPTDAEVFMNLS 478 (499)
T ss_pred ccCCCCchhhEEEE
Confidence 99999999987554
No 48
>KOG0405|consensus
Probab=100.00 E-value=1.1e-65 Score=516.36 Aligned_cols=443 Identities=28% Similarity=0.457 Sum_probs=399.2
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc-
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT- 467 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~- 467 (866)
+.||++|||||.+|+++|+++++.|.++.|+|.. ..+||+|.+.||+|.|.+++.+...+.+.+ ...||++.
T Consensus 19 k~fDylvIGgGSGGvasARrAa~~GAkv~l~E~~------f~lGGTCVn~GCVPKKvm~~~a~~~~~~~d-a~~yG~~~~ 91 (478)
T KOG0405|consen 19 KDFDYLVIGGGSGGVASARRAASHGAKVALCELP------FGLGGTCVNVGCVPKKVMWYAADYSEEMED-AKDYGFPIN 91 (478)
T ss_pred cccceEEEcCCcchhHHhHHHHhcCceEEEEecC------CCcCceEEeeccccceeEEehhhhhHHhhh-hhhcCCccc
Confidence 4699999999999999999999999999999985 589999999999999999999988887776 77889987
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCc
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~ 545 (866)
....++|..+.+.++.++.+++..++..+.+.+|+++.|+..+.++ ..++|...++ ..|++++++||||++|.
T Consensus 92 ~~~~fdW~~ik~krdayi~RLngIY~~~L~k~~V~~i~G~a~f~~~-----~~v~V~~~d~~~~~Ytak~iLIAtGg~p~ 166 (478)
T KOG0405|consen 92 EEGSFDWKVIKQKRDAYILRLNGIYKRNLAKAAVKLIEGRARFVSP-----GEVEVEVNDGTKIVYTAKHILIATGGRPI 166 (478)
T ss_pred cccCCcHHHHHhhhhHHHHHHHHHHHhhccccceeEEeeeEEEcCC-----CceEEEecCCeeEEEecceEEEEeCCccC
Confidence 5678999999999999999999999999999999999999999887 7777765555 45889999999999998
Q ss_pred CCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 546 SFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.|.+++ ..+-++++.++++.+.|+|++|+|+|++|+|+|..|+.+|++++++.|.+.+|+.||+.+++.+.+.|+..|
T Consensus 167 ~PnIpG--~E~gidSDgff~Lee~Pkr~vvvGaGYIavE~Agi~~gLgsethlfiR~~kvLR~FD~~i~~~v~~~~~~~g 244 (478)
T KOG0405|consen 167 IPNIPG--AELGIDSDGFFDLEEQPKRVVVVGAGYIAVEFAGIFAGLGSETHLFIRQEKVLRGFDEMISDLVTEHLEGRG 244 (478)
T ss_pred CCCCCc--hhhccccccccchhhcCceEEEEccceEEEEhhhHHhhcCCeeEEEEecchhhcchhHHHHHHHHHHhhhcc
Confidence 775443 345689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
|++|.++.++++....++....... .+. ...+|.++||+|+.||+..|++++.|++++.+|.|.||+|.+||+
T Consensus 245 invh~~s~~~~v~K~~~g~~~~i~~-~~~------i~~vd~llwAiGR~Pntk~L~le~vGVk~~~~g~IivDeYq~Tnv 317 (478)
T KOG0405|consen 245 INVHKNSSVTKVIKTDDGLELVITS-HGT------IEDVDTLLWAIGRKPNTKGLNLENVGVKTDKNGAIIVDEYQNTNV 317 (478)
T ss_pred eeecccccceeeeecCCCceEEEEe-ccc------cccccEEEEEecCCCCcccccchhcceeeCCCCCEEEeccccCCC
Confidence 9999999999998877665444432 332 556999999999999999999999999999999999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhC--CCCCCCCCCccEEEEccCceeeeecCHHHHHhcC--CcEEEEEEec
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG--QKHSINFNALPFVIYTFPEIASVGKTEQYLKKHN--ISYNVGIFPF 781 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g--~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~--~~~~~~~~~~ 781 (866)
|+||++||+++...+...|+..|+..++.+++ ++.+.+|..+|.++|+.|+++.|||||+||.++. -++.+....|
T Consensus 318 p~I~avGDv~gk~~LTPVAiaagr~la~rlF~~~~~~kldY~nVp~vVFshP~igtVGLtE~EAiekyg~~~i~vy~s~F 397 (478)
T KOG0405|consen 318 PSIWAVGDVTGKINLTPVAIAAGRKLANRLFGGGKDTKLDYENVPCVVFSHPPIGTVGLTEEEAIEKYGKGDIKVYTSKF 397 (478)
T ss_pred CceEEeccccCcEecchHHHhhhhhHHHHhhcCCCCCccccccCceEEEecCCcccccCCHHHHHHHhCccceEEEecCC
Confidence 99999999999999999999999999999997 4577899999999999999999999999998874 4566655445
Q ss_pred CCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHH
Q psy9583 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852 (866)
Q Consensus 782 ~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~ 852 (866)
..+..+......+.++||++..++.+++|+|++|+.+.|+++-++.|+++|+|..|+.+...+|||.+|.|
T Consensus 398 ~pm~~a~~~~k~kt~mKlvc~~~~eKVvG~hm~G~~s~EilQGf~VAvKmGaTKadFD~tVaIHPTSAEEl 468 (478)
T KOG0405|consen 398 NPMKYAMSGRKEKTLMKLVCAGKSEKVVGVHMCGDDSAEILQGFAVAVKMGATKADFDSTVAIHPTSAEEL 468 (478)
T ss_pred chhHhHhhcCCcceEEEEEEecCCCcEEEEEEecCCcHHHHhhhhhheecCcchhhhccceeecCCCHHHh
Confidence 54545444455689999999999999999999999999999999999999999999999999999999986
No 49
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=100.00 E-value=3.7e-64 Score=573.13 Aligned_cols=430 Identities=28% Similarity=0.503 Sum_probs=379.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+||||||||++||..|+++|++|+|||+++ ..+||+|.+.||+|+|.++...+.
T Consensus 3 ~~dvvVIG~GpaG~~aA~~l~~~g~~V~liE~~~-----~~~GG~c~~~gciP~k~~~~~~~~----------------- 60 (438)
T PRK07251 3 TYDLIVIGFGKAGKTLAAKLASAGKKVALVEESK-----AMYGGTCINIGCIPTKTLLVAAEK----------------- 60 (438)
T ss_pred ccCEEEECCCHHHHHHHHHHHhCCCEEEEEecCC-----cccceeeecCccccchHhhhhhhc-----------------
Confidence 5999999999999999999999999999999962 137999999999999988765431
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCC-ceEEEecEEEEecCCCCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKT-KETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~-g~~i~~d~lViATGs~p~~~p 548 (866)
..+|..+..+.+....++.......+.+.+|+++.++..+.+. +++.+...+ ...+.||+||||||++|+.|+
T Consensus 61 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~-----~~v~v~~~~~~~~~~~d~vViATGs~~~~p~ 134 (438)
T PRK07251 61 -NLSFEQVMATKNTVTSRLRGKNYAMLAGSGVDLYDAEAHFVSN-----KVIEVQAGDEKIELTAETIVINTGAVSNVLP 134 (438)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CEEEEeeCCCcEEEEcCEEEEeCCCCCCCCC
Confidence 2467777777777777776666677888999999999888755 777776432 357999999999999998776
Q ss_pred CCcCC-CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCE
Q psy9583 549 GVKFD-ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627 (866)
Q Consensus 549 ~~~~~-~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 627 (866)
.++.. ...++++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++...+.+.|+++||+
T Consensus 135 i~G~~~~~~v~~~~~~~~~~~~~~~vvIIGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~l~~~GI~ 214 (438)
T PRK07251 135 IPGLADSKHVYDSTGIQSLETLPERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTILPREEPSVAALAKQYMEEDGIT 214 (438)
T ss_pred CCCcCCCCcEEchHHHhcchhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCccCCCCCHHHHHHHHHHHHHcCCE
Confidence 55542 34578888888877789999999999999999999999999999999999999989999999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
+++++++++++.+++.+.+.. ++. ++++|.+++|+|++|+.+.+.+++.++.++.+|+|.||+++||++||
T Consensus 215 i~~~~~V~~i~~~~~~v~v~~---~g~------~i~~D~viva~G~~p~~~~l~l~~~~~~~~~~g~i~vd~~~~t~~~~ 285 (438)
T PRK07251 215 FLLNAHTTEVKNDGDQVLVVT---EDE------TYRFDALLYATGRKPNTEPLGLENTDIELTERGAIKVDDYCQTSVPG 285 (438)
T ss_pred EEcCCEEEEEEecCCEEEEEE---CCe------EEEcCEEEEeeCCCCCcccCCchhcCcEECCCCcEEECCCcccCCCC
Confidence 999999999987655554432 343 79999999999999999987778888988888999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhCCCC--CCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKH--SINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|||+|||++.+++.+.|..+|++++.++++... ..++..+|+++|++|+++++|+||+||++.|+++.+..+++...+
T Consensus 286 IyaiGD~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~ 365 (438)
T PRK07251 286 VFAVGDVNGGPQFTYISLDDFRIVFGYLTGDGSYTLEDRGNVPTTMFITPPLSQVGLTEKEAKEAGLPYAVKELLVAAMP 365 (438)
T ss_pred EEEeeecCCCcccHhHHHHHHHHHHHHHcCCCCccccccCCCCEEEECCCceEeeeCCHHHHHhcCCCeEEEEEECCcch
Confidence 999999999999999999999999999987643 235678999999999999999999999999999999999999999
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
++.+.++..||+||++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|.+.++.
T Consensus 366 ~~~~~~~~~g~~kli~d~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 436 (438)
T PRK07251 366 RAHVNNDLRGAFKVVVNTETKEILGATLFGEGSQEIINLITMAMDNKIPYTYFKKQIFTHPTMAENLNDLF 436 (438)
T ss_pred hhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcccccCCChHHHHHHHh
Confidence 99888888999999999999999999999999999999999999999999999999999999999998765
No 50
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=100.00 E-value=4.3e-65 Score=545.56 Aligned_cols=285 Identities=32% Similarity=0.499 Sum_probs=248.8
Q ss_pred cccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccccccccccccCCCcccccc-ccCCCccccccCch
Q psy9583 99 LNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKNINEEKQEKYKPYLDSISI-KNNSRLEECVPMSR 177 (866)
Q Consensus 99 ~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 177 (866)
...++||+||+||+|+||||+.| +||||+|||+++||++|+......+...++...+.....+. .......+.+|+++
T Consensus 47 ~~~~asP~aR~lA~e~gidl~~v-~gtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 125 (347)
T PRK14843 47 NVVRISPLAKRIALEHNIAWQEI-QGTGHRGKIMKKDVLALLPENIENDSIKSPAQIEKVEEVPDNVTPYGEIERIPMTP 125 (347)
T ss_pred ccccCCchhhHHHHHcCCCHhhC-CCCCCCCcccHHHHHHHHhccccCccccCCCCCccccCCCcccccCCcceeeeCcH
Confidence 34568999999999999999999 89999999999999999743211110000000000000000 00111245689999
Q ss_pred hHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeC--Cee
Q psy9583 178 LRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDG--NNI 255 (866)
Q Consensus 178 ~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~--~~~ 255 (866)
|||.||++|++||+++||+|++.++|+++|+++|+++++.+.+..|.++|+++||+||++.||++||.||++|++ +.+
T Consensus 126 ~r~~ia~~m~~S~~~ip~~~~~~evd~t~l~~~r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~~Na~~~~~~~~i 205 (347)
T PRK14843 126 MRKVIAQRMVESYLTAPTFTLNYEVDMTEMLALRKKVLEPIMEATGKKTTVTDLLSLAVVKTLMKHPYINASLTEDGKTI 205 (347)
T ss_pred HHHHHHHHHHHHHhhCCeEEEEEEEEchHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHhCcceeEEEecCCCeE
Confidence 999999999999999999999999999999999999997766666899999999999999999999999999984 579
Q ss_pred EEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCC
Q psy9583 256 IYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPP 335 (866)
Q Consensus 256 ~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p 335 (866)
++++++||||||++++||+||||||+|+||+.+|++++++|.+++|+|+|+++|++||||||||+|++|+++|+||||||
T Consensus 206 ~~~~~vnigvAV~~~~GL~vPVIr~a~~~sl~eIa~~i~~l~~~Ar~~kL~~~d~~GgTfTISNlG~~G~~~~tpIInpP 285 (347)
T PRK14843 206 ITHNYVNLAMAVGMDNGLMTPVVYNAEKMSLSELVVAFKDVIGRTLDGKLAPSELQNSTFTISNLGMFGVQSFGPIINQP 285 (347)
T ss_pred EEecccceEEEEecCCCeEeCcCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCCeEEEeCCCCCcccceeccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 336 QSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 336 ~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+||||+|++.++|++.+|++++|++|+++|+||||++||+++++|+..
T Consensus 286 q~aIlgvG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~ 334 (347)
T PRK14843 286 NSAILGVSSTIEKPVVVNGEIVIRPIMSLGLTIDHRVVDGMAGAKFMKD 334 (347)
T ss_pred ceEEEecCCcceeeEEECCeEEEEeEEEEEEecchhhhCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988765
No 51
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=100.00 E-value=7.3e-65 Score=534.42 Aligned_cols=283 Identities=33% Similarity=0.536 Sum_probs=247.6
Q ss_pred cccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhhccc-cccccccc-cC--CCc-cccccc-cCCCcccccc
Q psy9583 101 TIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSSIKN-INEEKQEK-YK--PYL-DSISIK-NNSRLEECVP 174 (866)
Q Consensus 101 ~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~~~~-~~~~~~~~-~~--~~~-~~~~~~-~~~~~~~~~~ 174 (866)
.++||+||+||+|+||||+.| +|||++|||+++||++|+...+. ..+.++.+ .. +.. ...+.+ ......+.+|
T Consensus 2 ~~asP~aR~lA~e~gvdl~~v-~gtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (306)
T PRK11857 2 ILATPIARALAKKLGIDISLL-KGSGRDGKILAEDVENFIKSLKSAPTPAEAASVSSAQQAAKTAAPAAAPPKLEGKREK 80 (306)
T ss_pred cCCCchhHHHHHHcCCCHHHC-CCCCCCCceeHHHHHHHhhccccccCCccccccccccccccccCCcccccCCCceecc
Confidence 358999999999999999999 79999999999999999743211 00000000 00 000 000000 0111245689
Q ss_pred CchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeC--
Q psy9583 175 MSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDG-- 252 (866)
Q Consensus 175 ~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~-- 252 (866)
|++||++|+++|++|++++||++++.++|+|+|+++|+++++.+.++.|.|+||++||+||+++||++||.+|++|++
T Consensus 81 ls~~R~~ia~~M~~S~~~ip~~~~~~evd~t~l~~~r~~~~~~~~~~~g~kls~~~~likA~a~AL~~~P~~Na~~~~~~ 160 (306)
T PRK11857 81 VAPIRKAIARAMTNSWSNVAYVNLVNEIDMTKLWDLRKSVKDPVLKTEGVKLTFLPFIAKAILIALKEFPIFAAKYDEAT 160 (306)
T ss_pred CcHHHHHHHHHHHHhhccCCeEEEEEEEEchHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHhCcHhhEEEeCCC
Confidence 999999999999999999999999999999999999999998776667899999999999999999999999999984
Q ss_pred CeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCcccccccc
Q psy9583 253 NNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPII 332 (866)
Q Consensus 253 ~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii 332 (866)
+.+++++++||||||++++||+||||||+|++|+.||++++++|.+++|+|+|.++|++||||||||+|++|+.+|+|||
T Consensus 161 ~~i~~~~~vnigvAv~~~~GL~vPVI~~a~~~sl~eIa~~i~~l~~~Ar~~kL~~~dl~ggTfTISNlG~~G~~~~tpiI 240 (306)
T PRK11857 161 SELVYPDTLNLGIAVDTEAGLMVPVIKNAQKLSIVEIAKEISRLAKAARERKIKPDEMKGGSFTITNYGSVGSLYGVPVI 240 (306)
T ss_pred CEEEEcCCccEEEEEECCCCEEeCCcCCcCcCCHHHHHHHHHHHHHHHHcCCCChhhcCCccEEEeCCCCCCccceeccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 333 NPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 333 ~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
||||+||||+|++.++|++.+|++++|++|+++++||||++||+++++|...
T Consensus 241 n~pq~aILgvG~i~~~pvv~~g~i~~r~~m~lslt~DHRviDGa~aa~Fl~~ 292 (306)
T PRK11857 241 NYPELAIAGVGAIIDKAIVKNGQIVAGKVMHLTVAADHRWIDGATIGRFASR 292 (306)
T ss_pred CCCccceeecccceEEeEEECCEEEEeeeeEEeEecchhhhCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988764
No 52
>KOG4716|consensus
Probab=100.00 E-value=2.4e-56 Score=446.83 Aligned_cols=455 Identities=27% Similarity=0.440 Sum_probs=384.2
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEecc-CC-CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW-KD-NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGI 465 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~-~~-~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi 465 (866)
+.+||++|||||.+||+||.+++..|.+|.++|-- +. ...++.+||+|.|.||+|.|.|.+.+-.-+.+.+ ...||+
T Consensus 17 sydyDLIviGgGSgGLacaKeAa~~G~kV~~lDfV~PtP~GtsWGlGGTCvNVGCIPKKLMHQAallG~al~d-a~kyGW 95 (503)
T KOG4716|consen 17 SYDYDLIVIGGGSGGLACAKEAADLGAKVACLDFVKPTPQGTSWGLGGTCVNVGCIPKKLMHQAALLGEALHD-ARKYGW 95 (503)
T ss_pred cCCccEEEEcCCcchhhHHHHHHhcCCcEEEEeecccCCCCCccccCceeeecccccHHHHHHHHHHHHHHHH-HHhhCC
Confidence 34699999999999999999999999999999864 22 3566789999999999999988877765555444 777888
Q ss_pred cccc--cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecC
Q psy9583 466 NTQN--VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATG 541 (866)
Q Consensus 466 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATG 541 (866)
+..+ ...||+.+.+..+..++.++|.++-.+++..|+++.....++++ +++......+ +.++++.+|||||
T Consensus 96 ~~~e~~ikhdW~~l~~sVqnhI~s~NW~yRv~LreKkV~Y~NsygeFv~~-----h~I~at~~~gk~~~~ta~~fvIatG 170 (503)
T KOG4716|consen 96 NVDEQKIKHDWNKLVKSVQNHIKSLNWGYRVQLREKKVEYINSYGEFVDP-----HKIKATNKKGKERFLTAENFVIATG 170 (503)
T ss_pred CCccccccccHHHHHHHHHHHhhhccceEEEEeccceeeeeecceeeccc-----ceEEEecCCCceEEeecceEEEEec
Confidence 7654 67899999999999999999999888999999999999999887 8887766444 6789999999999
Q ss_pred CCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH
Q psy9583 542 SKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621 (866)
Q Consensus 542 s~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l 621 (866)
.+|+.|.+++ ...+.+|++|++.+...|.+.+|||+|++++|+|.+|+.+|.+|+++.|+ -++++||.++.+.+.++|
T Consensus 171 ~RPrYp~IpG-~~Ey~ITSDDlFsl~~~PGkTLvVGa~YVaLECAgFL~gfg~~vtVmVRS-I~LrGFDqdmae~v~~~m 248 (503)
T KOG4716|consen 171 LRPRYPDIPG-AKEYGITSDDLFSLPYEPGKTLVVGAGYVALECAGFLKGFGYDVTVMVRS-ILLRGFDQDMAELVAEHM 248 (503)
T ss_pred CCCCCCCCCC-ceeeeecccccccccCCCCceEEEccceeeeehhhhHhhcCCCcEEEEEE-eecccccHHHHHHHHHHH
Confidence 9999765443 55678999999999999999999999999999999999999999999884 568999999999999999
Q ss_pred HHcCCEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecC-CCcEEeCC
Q psy9583 622 NKQGLNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNE-NNFIIVND 699 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-~G~i~Vd~ 699 (866)
+++||+|...+.++++++-++ .+.+........ +..+-.+|.|+||+|+.+.+.-++|++.|+..++ +|.|.||+
T Consensus 249 ~~~Gikf~~~~vp~~Veq~~~g~l~v~~k~t~t~---~~~~~~ydTVl~AiGR~~~~~~l~L~~~GVk~n~ks~KI~v~~ 325 (503)
T KOG4716|consen 249 EERGIKFLRKTVPERVEQIDDGKLRVFYKNTNTG---EEGEEEYDTVLWAIGRKALTDDLNLDNAGVKTNEKSGKIPVDD 325 (503)
T ss_pred HHhCCceeecccceeeeeccCCcEEEEeeccccc---ccccchhhhhhhhhccccchhhcCCCccceeecccCCccccCh
Confidence 999999999988888887654 455555432221 2336778999999999999999999999999965 58899999
Q ss_pred CCCCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHHhCC-CCCCCCCCccEEEEccCceeeeecCHHHHHhc-CCc-EE
Q psy9583 700 NCETNIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISGQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKH-NIS-YN 775 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~~-~~ 775 (866)
.-+|++|+|||+||... .|-+...|++.||.+|+++++. ....+|..+|+.+|+..|++++||+|++|.+. |.+ +.
T Consensus 326 ~e~t~vp~vyAvGDIl~~kpELTPvAIqsGrlLa~Rlf~gs~q~~dy~~V~TTVFTPLEy~c~GlsEE~Ai~k~g~dnie 405 (503)
T KOG4716|consen 326 EEATNVPYVYAVGDILEDKPELTPVAIQSGRLLARRLFAGSTQLMDYDDVATTVFTPLEYGCVGLSEEDAIEKYGEDNIE 405 (503)
T ss_pred HHhcCCCceEEecceecCCcccchhhhhhchHHHHHHhcCcceeeeccCCceeeecchhccccCCCHHHHHHHhCcccEE
Confidence 99999999999999985 5779999999999999999865 46678999999999999999999999999766 433 33
Q ss_pred EEEEecCCchhhhhc-CCceEEEEEEEEC-CCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHH
Q psy9583 776 VGIFPFLANSRARIL-GETSGMVKILSDM-KSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMK 853 (866)
Q Consensus 776 ~~~~~~~~~~~~~~~-~~~~g~~kli~~~-~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~ 853 (866)
+....|.....-.-. +....|+|+|+.. ++.+|+|.|++||+|.|+++-++.|++.|+|..+|.+++.+||+.+|.+.
T Consensus 406 vfH~~f~P~E~~ipqrd~~~CY~K~vc~r~~~qkv~G~H~lgPnAgEV~QGfaaAlk~glt~~~l~ntigIHPt~aE~Ft 485 (503)
T KOG4716|consen 406 VFHSYFKPLEYTIPQRDVRHCYLKAVCERDEDQKVLGLHILGPNAGEVIQGFAAALKCGLTKKDLDNTIGIHPTTAEEFT 485 (503)
T ss_pred EeeccccceEEEcccccCCceEEEEeecccCCceEEEEEEecCchhHHHHHHHHHHHhcccHHHHhhcccccccchhhee
Confidence 322222211111111 3356899999975 56799999999999999999999999999999999999999999999875
No 53
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=100.00 E-value=1.9e-52 Score=475.35 Aligned_cols=403 Identities=22% Similarity=0.332 Sum_probs=311.7
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceecc-ccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGC-IPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~-~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
++|||||||+||+.||.+|++. +.+|+|||+++. ++ +..| +|... . +..
T Consensus 2 ~~VVIIGgG~aG~~aA~~l~~~~~~~~I~li~~~~~------~~----~~~~~lp~~~----------------~-~~~- 53 (438)
T PRK13512 2 PKIIVVGAVAGGATCASQIRRLDKESDIIIFEKDRD------MS----FANCALPYYI----------------G-EVV- 53 (438)
T ss_pred CeEEEECCcHHHHHHHHHHHhhCCCCCEEEEECCCC------cc----cccCCcchhh----------------c-Ccc-
Confidence 4799999999999999999987 578999999732 11 0001 11100 0 000
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCC-c--eEEEecEEEEecCCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKT-K--ETITAKYIIIATGSK 543 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~-g--~~i~~d~lViATGs~ 543 (866)
........ .....++++.+++++.+..+. ++. +.+.+.+.+.+ + ..+.||+||||||+.
T Consensus 54 ----~~~~~~~~----------~~~~~~~~~~~i~v~~~~~V~~Id~---~~~~v~~~~~~~~~~~~~~yd~lviAtGs~ 116 (438)
T PRK13512 54 ----EDRKYALA----------YTPEKFYDRKQITVKTYHEVIAIND---ERQTVTVLNRKTNEQFEESYDKLILSPGAS 116 (438)
T ss_pred ----CCHHHccc----------CCHHHHHHhCCCEEEeCCEEEEEEC---CCCEEEEEECCCCcEEeeecCEEEECCCCC
Confidence 00000000 001234466799998765555 544 55777776532 2 357899999999999
Q ss_pred CcCCCCCcCCCceEecch---hhhcc-----ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHH
Q psy9583 544 ARSFPGVKFDENLILSNK---GALEM-----INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAK 615 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~---~~~~~-----~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~ 615 (866)
|+.|+. +...+++.. +...+ ...+++++|||||++|+|+|..|+++|.+|+++++.+++++.+++++.+
T Consensus 117 ~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtli~~~~~l~~~~d~~~~~ 193 (438)
T PRK13512 117 ANSLGF---ESDITFTLRNLEDTDAIDQFIKANQVDKALVVGAGYISLEVLENLYERGLHPTLIHRSDKINKLMDADMNQ 193 (438)
T ss_pred CCCCCC---CCCCeEEecCHHHHHHHHHHHhhcCCCEEEEECCCHHHHHHHHHHHhCCCcEEEEecccccchhcCHHHHH
Confidence 986652 223344332 22221 1247899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
.+.+.|+++||++++++++++++. . .+.+. +|. .+++|.|++|+|++||+++ +++.|++++++|+|
T Consensus 194 ~l~~~l~~~gI~i~~~~~v~~i~~--~--~v~~~--~g~------~~~~D~vl~a~G~~pn~~~--l~~~gl~~~~~G~i 259 (438)
T PRK13512 194 PILDELDKREIPYRLNEEIDAING--N--EVTFK--SGK------VEHYDMIIEGVGTHPNSKF--IESSNIKLDDKGFI 259 (438)
T ss_pred HHHHHHHhcCCEEEECCeEEEEeC--C--EEEEC--CCC------EEEeCEEEECcCCCcChHH--HHhcCcccCCCCcE
Confidence 999999999999999999999963 2 24443 454 7899999999999999987 57889999888999
Q ss_pred EeCCCCCCCCCCEEEecccCC----------CCCcHHHHHHHHHHHHHHHhCCCC-CC-CCCCccEEEEccCceeeeecC
Q psy9583 696 IVNDNCETNIPNIYAIGDVVR----------GPMLAHKAEEEGIMVAEHISGQKH-SI-NFNALPFVIYTFPEIASVGKT 763 (866)
Q Consensus 696 ~Vd~~l~Ts~~~VyA~GD~a~----------~~~~~~~A~~~g~~aa~~i~g~~~-~~-~~~~~p~~~~~~~~~a~vGl~ 763 (866)
.||+++||++|||||+|||++ .+++++.|.+||+++|+||+|... .+ .+..+|.+.|++|+++++|+|
T Consensus 260 ~Vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~la~~A~~~a~~~a~ni~g~~~~~~~~~~~~~~~~~~~~~ia~vGlt 339 (438)
T PRK13512 260 PVNDKFETNVPNIYAIGDIITSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVK 339 (438)
T ss_pred EECCCcccCCCCEEEeeeeEEeeeccCCCceecccchHHHHHHHHHHHHhcCCCccccCCcccceEEEEcCceEEeecCC
Confidence 999999999999999999986 246889999999999999998643 33 456788999999999999999
Q ss_pred HHHHHhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHccc-
Q psy9583 764 EQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPM-ASELIAEAVIAIEFRASSEDIARI- 841 (866)
Q Consensus 764 e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~-a~eli~~~~~~i~~~~~~~~l~~~- 841 (866)
|+||++.+ +.+..+++....+.. .+++.||+|+++|+++++|||+|++|++ +.|+|+.++++|++++|++||..+
T Consensus 340 e~~a~~~~--~~~~~~~~~~~~~~~-~~~~~g~~klv~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~ 416 (438)
T PRK13512 340 PNELKQFD--YKMVEVTQGAHANYY-PGNSPLHLRVYYDTSNRKILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE 416 (438)
T ss_pred HHHHccCC--cEEEEEecCCcCCCc-CCCceEEEEEEEECCCCeEEEEEEEccccHHHHHHHHHHHHHcCCcHHHHhhcc
Confidence 99999764 566666655444433 5678999999999999999999999996 899999999999999999999997
Q ss_pred cccCCChhHH---HHHHHHH
Q psy9583 842 CHVHPSLSEA---MKEAAMS 858 (866)
Q Consensus 842 ~~~~Pt~~e~---~~~~~~~ 858 (866)
+++||+++.. ++.+++.
T Consensus 417 ~~~~P~~~~~~~~~~~~~~~ 436 (438)
T PRK13512 417 VAYAPPYSHPKDLINMIGYK 436 (438)
T ss_pred cccCCCCCccccHHHHHHHh
Confidence 8899999955 4555543
No 54
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=100.00 E-value=1.2e-51 Score=472.39 Aligned_cols=405 Identities=25% Similarity=0.314 Sum_probs=315.8
Q ss_pred ceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccceecc-ccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTNVGC-IPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~~g~-~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+|||||||+||++||..|++.+ .+|+|||+++ .++ +..| +|.. . .+.
T Consensus 2 ~vvIIGgG~aGl~aA~~l~~~~~~~~Vtli~~~~------~~~----~~~~~~~~~---------------~--~~~--- 51 (444)
T PRK09564 2 KIIIIGGTAAGMSAAAKAKRLNKELEITVYEKTD------IVS----FGACGLPYF---------------V--GGF--- 51 (444)
T ss_pred eEEEECCcHHHHHHHHHHHHHCCCCcEEEEECCC------cce----eecCCCceE---------------e--ccc---
Confidence 6999999999999999999985 5899999973 211 0000 1100 0 000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCceEEE--ecEEEEecCCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTKETIT--AKYIIIATGSKA 544 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g~~i~--~d~lViATGs~p 544 (866)
......+. ......+++.+++++.+..+. ++. ..+.+.+.. .++..+. ||+||||||++|
T Consensus 52 --~~~~~~~~-----------~~~~~~~~~~gv~~~~~~~V~~id~---~~~~v~~~~~~~~~~~~~~yd~lviAtG~~~ 115 (444)
T PRK09564 52 --FDDPNTMI-----------ARTPEEFIKSGIDVKTEHEVVKVDA---KNKTITVKNLKTGSIFNDTYDKLMIATGARP 115 (444)
T ss_pred --cCCHHHhh-----------cCCHHHHHHCCCeEEecCEEEEEEC---CCCEEEEEECCCCCEEEecCCEEEECCCCCC
Confidence 00000000 011234566799998776555 443 446777754 2344566 999999999999
Q ss_pred cCCCCCcCCCceEecc---hhhhccc-----cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHH
Q psy9583 545 RSFPGVKFDENLILSN---KGALEMI-----NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAK 615 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~---~~~~~~~-----~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~ 615 (866)
..++.++.....+++. .+...+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+
T Consensus 116 ~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~ 195 (444)
T PRK09564 116 IIPPIKNINLENVYTLKSMEDGLALKELLKDEEIKNIVIIGAGFIGLEAVEAAKHLGKNVRIIQLEDRILPDSFDKEITD 195 (444)
T ss_pred CCCCCCCcCCCCEEEECCHHHHHHHHHHHhhcCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEeCCcccCchhcCHHHHH
Confidence 8665554443444433 2233322 2478999999999999999999999999999999998886 68999999
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
.+.+.|++.||++++++++.++..++....+.. ++. ++++|.+++|+|++|+.++ ++++|++++++|+|
T Consensus 196 ~l~~~l~~~gI~v~~~~~v~~i~~~~~~~~v~~---~~~------~i~~d~vi~a~G~~p~~~~--l~~~gl~~~~~g~i 264 (444)
T PRK09564 196 VMEEELRENGVELHLNEFVKSLIGEDKVEGVVT---DKG------EYEADVVIVATGVKPNTEF--LEDTGLKTLKNGAI 264 (444)
T ss_pred HHHHHHHHCCCEEEcCCEEEEEecCCcEEEEEe---CCC------EEEcCEEEECcCCCcCHHH--HHhcCccccCCCCE
Confidence 999999999999999999999975443222322 333 6899999999999999887 68889998888999
Q ss_pred EeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHHHHHHhCCCCCCCCCCccE-EEEccCceeeeecCH
Q psy9583 696 IVNDNCETNIPNIYAIGDVVRG----------PMLAHKAEEEGIMVAEHISGQKHSINFNALPF-VIYTFPEIASVGKTE 764 (866)
Q Consensus 696 ~Vd~~l~Ts~~~VyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~-~~~~~~~~a~vGl~e 764 (866)
.||+++||++|||||+|||++. +++++.|.+||+++|+||+|....++....+. ..|++|+++++|+||
T Consensus 265 ~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~qg~~~a~ni~g~~~~~~~~~~~~~~~~~~~~~a~vG~t~ 344 (444)
T PRK09564 265 IVDEYGETSIENIYAAGDCATIYNIVSNKNVYVPLATTANKLGRMVGENLAGRHVSFKGTLGSACIKVLDLEAARTGLTE 344 (444)
T ss_pred EECCCcccCCCCEEEeeeEEEEEeccCCCeeeccchHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCEEEEEecCCH
Confidence 9999999999999999999963 46899999999999999999766655555444 559999999999999
Q ss_pred HHHHhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHccccc
Q psy9583 765 QYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPM-ASELIAEAVIAIEFRASSEDIARICH 843 (866)
Q Consensus 765 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~-a~eli~~~~~~i~~~~~~~~l~~~~~ 843 (866)
+||++.|+++.+.+++.. +.++.+.+.+.||+||++|+++++|||+|++|+. +.++|+.+++||++++|++||+++.+
T Consensus 345 ~~a~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~~~~~~i~~~~~~i~~~~~~~~~~~~~~ 423 (444)
T PRK09564 345 EEAKKLGIDYKTVFIKDK-NHTNYYPGQEDLYVKLIYEADTKVILGGQIIGKKGAVLRIDALAVAIYAKLTTQELGMMDF 423 (444)
T ss_pred HHHHHCCCCeEEEEEecC-CCCCcCCCCceEEEEEEEECCCCeEEeEEEEcCccHHHHHHHHHHHHHCCCCHHHHhhccc
Confidence 999999999999887643 4555666778999999999999999999999996 88999999999999999999999988
Q ss_pred cC-CChhHHHHH
Q psy9583 844 VH-PSLSEAMKE 854 (866)
Q Consensus 844 ~~-Pt~~e~~~~ 854 (866)
+| |+++|+++-
T Consensus 424 ~~~p~~~~~~~~ 435 (444)
T PRK09564 424 CYAPPFARTWDA 435 (444)
T ss_pred ccCCCCCCCcCH
Confidence 77 999988653
No 55
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=100.00 E-value=1.9e-53 Score=433.69 Aligned_cols=215 Identities=43% Similarity=0.702 Sum_probs=190.8
Q ss_pred ccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccce
Q psy9583 169 LEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINA 248 (866)
Q Consensus 169 ~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~ 248 (866)
.++++|++++||+||++|++|++++||+|++.++|+|+|+++|+++++...+. +.++|+++|++||+++||++||++|+
T Consensus 3 ~~~~~~ls~~r~~ia~~m~~S~~~iP~~~~~~evd~t~l~~~r~~l~~~~~~~-~~kis~~~~likAva~AL~~~P~lNa 81 (231)
T PF00198_consen 3 EETRVPLSGMRKAIAKRMTESLQTIPHFTLSREVDVTALLALRKELKEAGEEP-GGKISITDFLIKAVALALKEHPELNA 81 (231)
T ss_dssp SCEEEES-HHHHHHHHHHHHHHHHS-EEEEEEEEETHHHHHHHHHHHHHHHHT-TST-THHHHHHHHHHHHHHHSGGGSE
T ss_pred CcEEEECcHHHHHHHHHHHHHHhcCCeEEEEEEEEHHHHHHHHHHhhhHHHhh-ccCCChhHeeeehHhhhhHHHHHhcc
Confidence 35789999999999999999999999999999999999999999999875443 55999999999999999999999999
Q ss_pred EEeCCe-eEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccc
Q psy9583 249 SVDGNN-IIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSML 327 (866)
Q Consensus 249 ~~~~~~-~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~ 327 (866)
+|+++. +++++++||||||++++||++|||||++++|+.||+++++++.+++|+|+|.++|++||||||||+|++|+++
T Consensus 82 ~~~~~~~i~~~~~vnIgvAV~~~~GL~vPVIr~a~~~sl~eIa~e~~~l~~~ar~g~l~~~d~~g~TftisNlG~~g~~~ 161 (231)
T PF00198_consen 82 SWDGDGEIVLYERVNIGVAVDTPDGLVVPVIRDADKKSLAEIAKELRDLAERAREGKLTPEDLQGGTFTISNLGMFGVES 161 (231)
T ss_dssp EEETTSEEEEESS--EEEEEEETTEEEEEEETTGGGS-HHHHHHHHHHHHHHHHTT---GGGGSS-SEEEEEGGGTT-SC
T ss_pred ccccccceeeeeeEEEEEEEEcCCCEEEEEEeCCccccHHHHHHHHhhhhccchhhhhhhhhhhccceeeeecCCCCcce
Confidence 999887 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 328 STPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 328 ~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+|||||||+|||++|++.++|++++|+++++++|+++|+||||++||.++++|...
T Consensus 162 ~~pii~~pq~ail~vG~i~~~p~~~~~~~~~~~~~~lslt~DHRvidG~~aa~Fl~~ 218 (231)
T PF00198_consen 162 FTPIINPPQVAILGVGAIRDRPVVEDGEVVVRPVMNLSLTFDHRVIDGAEAARFLKD 218 (231)
T ss_dssp EE----TTSSEEEEEEEEEEEEEEETTCEEEEEEEEEEEEEETTTS-HHHHHHHHHH
T ss_pred eEccCCcccceEEEecceEEEEEEEeccceeeEEEEeEEeccceEEcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988764
No 56
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=100.00 E-value=4.4e-45 Score=415.49 Aligned_cols=342 Identities=26% Similarity=0.349 Sum_probs=281.9
Q ss_pred HHHhCCcEEEEeEEEE-eccccCcccEEEEEcC-CceEEE--ecEEEEecCCCCcCCCCCcCCCceEecchhhhc---c-
Q psy9583 495 LFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINK-TKETIT--AKYIIIATGSKARSFPGVKFDENLILSNKGALE---M- 566 (866)
Q Consensus 495 ~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~-~g~~i~--~d~lViATGs~p~~~p~~~~~~~~~~t~~~~~~---~- 566 (866)
++++.|++++.+..+. ++. ..+.+.+... ++..+. ||+||||||++|..++.++.+...+++..+... +
T Consensus 53 ~~~~~gv~~~~~~~V~~id~---~~~~v~~~~~~~~~~~~~~yd~lIiATG~~p~~~~i~G~~~~~v~~~~~~~~~~~~~ 129 (427)
T TIGR03385 53 FIKKRGIDVKTNHEVIEVND---ERQTVVVRNNKTNETYEESYDYLILSPGASPIVPNIEGINLDIVFTLRNLEDTDAIK 129 (427)
T ss_pred HHHhcCCeEEecCEEEEEEC---CCCEEEEEECCCCCEEecCCCEEEECCCCCCCCCCCCCcCCCCEEEECCHHHHHHHH
Confidence 4577899988776665 443 4567777643 245677 999999999999876655443344444333221 1
Q ss_pred ----ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC
Q psy9583 567 ----INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINK 641 (866)
Q Consensus 567 ----~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~ 641 (866)
...+++++|||||++|+|+|..|++.|.+|+++++.+.++ +.+++++...+.+.|++.||++++++.+.++..++
T Consensus 130 ~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 209 (427)
T TIGR03385 130 QYIDKNKVENVVIIGGGYIGIEMAEALRERGKNVTLIHRSERILNKLFDEEMNQIVEEELKKHEINLRLNEEVDSIEGEE 209 (427)
T ss_pred HHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCcEEEEECCcccCccccCHHHHHHHHHHHHHcCCEEEeCCEEEEEecCC
Confidence 1347899999999999999999999999999999999884 67899999999999999999999999999998654
Q ss_pred CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCCC----
Q psy9583 642 ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG---- 717 (866)
Q Consensus 642 ~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~---- 717 (866)
. + +.+. +|. ++++|.+++|+|++|+.++ +++++++++++|+|.||+++||+.|+|||+|||++.
T Consensus 210 ~-~-v~~~--~g~------~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~~G~i~vd~~~~t~~~~Vya~GD~~~~~~~~ 277 (427)
T TIGR03385 210 R-V-KVFT--SGG------VYQADMVILATGIKPNSEL--AKDSGLKLGETGAIWVNEKFQTSVPNIYAAGDVAESHNII 277 (427)
T ss_pred C-E-EEEc--CCC------EEEeCEEEECCCccCCHHH--HHhcCcccCCCCCEEECCCcEeCCCCEEEeeeeEEeeecc
Confidence 3 2 3333 555 7999999999999999987 578899998889999999999999999999999962
Q ss_pred ------CCcHHHHHHHHHHHHHHHhCCCCCCCC-CCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhhhc
Q psy9583 718 ------PMLAHKAEEEGIMVAEHISGQKHSINF-NALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARIL 790 (866)
Q Consensus 718 ------~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~ 790 (866)
+++++.|.+||++||+||+|....++. ...|++.|++|+++++|+++++|++.|+++.+..+++....+.. .
T Consensus 278 ~~~~~~~~~~~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~~~a~vG~t~~~a~~~g~~~~~~~~~~~~~~~~~-~ 356 (427)
T TIGR03385 278 TKKPAWVPLAWGANKMGRIAGENIAGNDIEFKGVLGTNITKFFDLTIASTGVTENEAKKLNIDYKTVFVKAKTHANYY-P 356 (427)
T ss_pred CCCceeeechHHHHHHHHHHHHHhcCCCCCCCCcceeeEEEEcCeEEEEecCCHHHHHHCCCCeEEEEEecCCCCCcC-C
Confidence 358999999999999999987654432 35788999999999999999999999999998887765544433 4
Q ss_pred CCceEEEEEEEECCCCcEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHccccc-cCCChhHHH
Q psy9583 791 GETSGMVKILSDMKSDEILGIHIIGPM-ASELIAEAVIAIEFRASSEDIARICH-VHPSLSEAM 852 (866)
Q Consensus 791 ~~~~g~~kli~~~~~~~ilG~~~~g~~-a~eli~~~~~~i~~~~~~~~l~~~~~-~~Pt~~e~~ 852 (866)
+.+.||+|+++|+++++|||+|++|++ +.|+|+.+++||++++|++||+++.| .||.++..+
T Consensus 357 ~~~~g~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~ 420 (427)
T TIGR03385 357 GNSPLHLKLIYEKDTRRILGAQAVGKEGADKRIDVLAAAIMAGLTVKDLFFFELAYAPPYSRVW 420 (427)
T ss_pred CCceEEEEEEEECCCCeEEEEEEEccccHHHHHHHHHHHHHCCCCHHHHhhcccccCCCCCCcc
Confidence 677899999999999999999999998 99999999999999999999999975 479888654
No 57
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=100.00 E-value=1.8e-44 Score=405.74 Aligned_cols=214 Identities=26% Similarity=0.429 Sum_probs=202.7
Q ss_pred cccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceE
Q psy9583 170 EECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINAS 249 (866)
Q Consensus 170 ~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~ 249 (866)
.+.+|+++++++|+++|..|+. +|++|...+++++.|+++|.++|..+.+..|.|+||||+|+||+++||++||.+|++
T Consensus 115 ~~~~~LrG~a~aiAkNM~aSL~-vPtaTsvr~Ip~k~L~dnR~~In~~l~r~~GgKVSFThlI~kAvv~AL~~~P~mNas 193 (1228)
T PRK12270 115 DEVTPLRGAAAAVAKNMDASLE-VPTATSVRAVPAKLLIDNRIVINNHLKRTRGGKVSFTHLIGYALVQALKAFPNMNRH 193 (1228)
T ss_pred cceeecccHHHHHHHHHHhhhc-cCceeeeecccHHHHHHHHHHHHHHhhhccCCcccHHHHHHHHHHHHHHhCchhhce
Confidence 4678999999999999999977 899999999999999999999999999899999999999999999999999999999
Q ss_pred Ee--CCe--eEEccceeEEEEEecC-----CceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcC
Q psy9583 250 VD--GNN--IIYHKYYDIGIAISSS-----RGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNG 320 (866)
Q Consensus 250 ~~--~~~--~~~~~~~~i~~av~~~-----~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~ 320 (866)
|+ +++ ++++++||||+||+++ +||+||+||+|++|++.+|.+++.++++|+|+|+|+++|++||||||||+
T Consensus 194 y~~~DGKp~iv~~~~VNlGiAVdl~~~dGsRgLVVPvIK~Ad~l~f~ef~~ay~dLV~KAR~gKLt~eD~~GgTFTISN~ 273 (1228)
T PRK12270 194 YAEVDGKPTLVTPAHVNLGLAIDLPKKDGSRQLVVPAIKGAETMDFAQFWAAYEDIVRRARDGKLTADDFQGTTISLTNP 273 (1228)
T ss_pred eeccCCCceeeccCCcceEEEEecCCCCCCcceeeccccccccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCceEEEecC
Confidence 97 444 9999999999999998 58999999999999999999999999999999999999999999999999
Q ss_pred CCcCccccccccCCCceEEEEeccceeeEEEeC------CeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 321 GVFGSMLSTPIINPPQSAILGVHAIKKRVIVEN------NNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 321 g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~------~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
||+|+..|+|||||||+||||+|++...|++.+ +++.++++|++++++|||++||++++.|+..
T Consensus 274 G~iGt~~ftPILnppQ~AILGVGAi~~p~~f~gas~~~l~~i~i~kvMtLTlTyDHRVIdGA~sg~FL~~ 343 (1228)
T PRK12270 274 GGIGTVHSVPRLMKGQGAIIGVGAMEYPAEFQGASEERLAELGISKVMTLTSTYDHRIIQGAESGEFLRT 343 (1228)
T ss_pred CcccccceeeeecCCceEEEeccccccCceecCcccccccccceeeeEEeeeeccceeeccHhHHHHHHH
Confidence 999999999999999999999999998888743 6899999999999999999999998877643
No 58
>PRK14989 nitrite reductase subunit NirD; Provisional
Probab=100.00 E-value=4.3e-42 Score=411.96 Aligned_cols=388 Identities=17% Similarity=0.251 Sum_probs=293.2
Q ss_pred cceeeecCCccHHHHHHHHHHC----CCeEEEEeccCCC-cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL----GFKTACIDEWKDN-EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGI 465 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~----g~~V~liek~~~~-~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi 465 (866)
.+|||||+|+||+.+|..|++. +++|+||++++++ |.+..+ + .. +. +
T Consensus 4 ~kIVIVG~G~AG~~aa~~L~~~~~~~~~~Itvi~~e~~~~Y~r~~L----------~-~~--------------~~--~- 55 (847)
T PRK14989 4 VRLAIIGNGMVGHRFIEDLLDKADAANFDITVFCEEPRIAYDRVHL----------S-SY--------------FS--H- 55 (847)
T ss_pred CcEEEECCCHHHHHHHHHHHhhCCCCCCeEEEEECCCCCcccCCcc----------h-Hh--------------Hc--C-
Confidence 5899999999999999999865 4789999997421 111000 0 00 00 0
Q ss_pred cccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 466 NTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
..+.. +......++++.+|+++.++.+. ++. ..+ .|.+.++..+.||+||||||+.|
T Consensus 56 ------~~~~~-----------l~~~~~~~~~~~gI~~~~g~~V~~Id~---~~~--~V~~~~G~~i~yD~LVIATGs~p 113 (847)
T PRK14989 56 ------HTAEE-----------LSLVREGFYEKHGIKVLVGERAITINR---QEK--VIHSSAGRTVFYDKLIMATGSYP 113 (847)
T ss_pred ------CCHHH-----------ccCCCHHHHHhCCCEEEcCCEEEEEeC---CCc--EEEECCCcEEECCEEEECCCCCc
Confidence 00111 11112346777899999998666 544 223 34445677899999999999999
Q ss_pred cCCCCCcCCCceEe---cchhhhcc---ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHH
Q psy9583 545 RSFPGVKFDENLIL---SNKGALEM---INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKA 617 (866)
Q Consensus 545 ~~~p~~~~~~~~~~---t~~~~~~~---~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l 617 (866)
+.||.++.+...++ +.+++..+ ...+++++|||||++|+|+|..|.++|.+|+++++.+++++ .+|++....+
T Consensus 114 ~~p~ipG~~~~~v~~~rt~~d~~~l~~~~~~~k~vvVIGgG~iGlE~A~~L~~~G~~VtvVe~~~~ll~~~ld~~~~~~l 193 (847)
T PRK14989 114 WIPPIKGSETQDCFVYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPMLMAEQLDQMGGEQL 193 (847)
T ss_pred CCCCCCCCCCCCeEEECCHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeccccchhhhcCHHHHHHH
Confidence 97766554444333 44555443 23578999999999999999999999999999999999887 6899999999
Q ss_pred HHHHHHcCCEEEeCceEEEEEEcCC--eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKINKE--NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~~~~--~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
.+.|++.||+++++..++++..++. ...+.+ .+|. ++++|.|++|+|++||+++ ++++|++++++|+|
T Consensus 194 ~~~L~~~GV~v~~~~~v~~I~~~~~~~~~~v~~--~dG~------~i~~D~Vv~A~G~rPn~~L--~~~~Gl~~~~~G~I 263 (847)
T PRK14989 194 RRKIESMGVRVHTSKNTLEIVQEGVEARKTMRF--ADGS------ELEVDFIVFSTGIRPQDKL--ATQCGLAVAPRGGI 263 (847)
T ss_pred HHHHHHCCCEEEcCCeEEEEEecCCCceEEEEE--CCCC------EEEcCEEEECCCcccCchH--HhhcCccCCCCCcE
Confidence 9999999999999999999976532 233444 3665 8999999999999999986 68889999989999
Q ss_pred EeCCCCCCCCCCEEEecccCCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCCccE-EEEccCceeeeecCHHHHHhc
Q psy9583 696 IVNDNCETNIPNIYAIGDVVRGP----MLAHKAEEEGIMVAEHISGQKHSINFNALPF-VIYTFPEIASVGKTEQYLKKH 770 (866)
Q Consensus 696 ~Vd~~l~Ts~~~VyA~GD~a~~~----~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~-~~~~~~~~a~vGl~e~~a~~~ 770 (866)
.||++|||++|+|||+|||+..+ .+++.|.+||++||+||+|....++....+. ..+.+.+++++|.... +..
T Consensus 264 ~VD~~l~Ts~p~IYAiGD~a~~~~~~~gl~~~a~~~a~vaa~~i~g~~~~~~g~~~~~~lk~~G~~v~s~G~~~~--~~~ 341 (847)
T PRK14989 264 VINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHLLGSENAFEGADLSAKLKLLGVDVGGIGDAHG--RTP 341 (847)
T ss_pred EECCCCcCCCCCEEEeecceeEcCcccccHHHHHHHHHHHHHHhcCCCcCCCCcccceEEEECCcceEecccccC--CCC
Confidence 99999999999999999999753 4899999999999999999877777666664 3467778999883211 100
Q ss_pred CCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCCh--HHHHHHHHHHHHCCCCHHHHcccccc---C
Q psy9583 771 NISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMA--SELIAEAVIAIEFRASSEDIARICHV---H 845 (866)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a--~eli~~~~~~i~~~~~~~~l~~~~~~---~ 845 (866)
+ .....+ ..+...+|.||++++++++|||++++|+.+ .++++.+...+..+.+.++|....++ |
T Consensus 342 ~--~~~~~~---------~~~~~~~y~Klv~~~~~~~LlGa~lvGd~~~~~~l~~~~~~~~~l~~~~~~l~~~~~~~~~~ 410 (847)
T PRK14989 342 G--ARSYVY---------LDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHAGSGK 410 (847)
T ss_pred C--ceeEEE---------EcCCCCEEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHcCCCCccchhheecCCCCCCCC
Confidence 1 111001 112357899999999999999999999954 88899888888888888898877654 7
Q ss_pred CCh-hHH
Q psy9583 846 PSL-SEA 851 (866)
Q Consensus 846 Pt~-~e~ 851 (866)
|++ .|.
T Consensus 411 ~~~~~~~ 417 (847)
T PRK14989 411 PSIGVDK 417 (847)
T ss_pred Ccccccc
Confidence 877 443
No 59
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=354.54 Aligned_cols=362 Identities=20% Similarity=0.241 Sum_probs=259.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCC--eEEEEeccCC-CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGF--KTACIDEWKD-NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~--~V~liek~~~-~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
..+|||||||+||++||..|++.|. +|+||++++. ||.++.+ ++.++.. ...
T Consensus 3 ~~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li~~e~~~~y~r~~l-----------~~~~~~~--------------~~~ 57 (396)
T PRK09754 3 EKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPL-----------SKSMLLE--------------DSP 57 (396)
T ss_pred cCcEEEECChHHHHHHHHHHHhhCCCCCEEEeCCCCCCCCCCCCC-----------CHHHHCC--------------CCc
Confidence 4689999999999999999999976 7999998732 1211110 0100000 000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
. ... + ....++.+.+|+++.++.+. ++. ..+.+.+ .++..+.||+||||||+.|+
T Consensus 58 ~-~~~-----~-------------~~~~~~~~~~i~~~~g~~V~~id~---~~~~v~~--~~g~~~~yd~LViATGs~~~ 113 (396)
T PRK09754 58 Q-LQQ-----V-------------LPANWWQENNVHLHSGVTIKTLGR---DTRELVL--TNGESWHWDQLFIATGAAAR 113 (396)
T ss_pred c-ccc-----c-------------CCHHHHHHCCCEEEcCCEEEEEEC---CCCEEEE--CCCCEEEcCEEEEccCCCCC
Confidence 0 000 0 00234566899999987654 554 3344444 55678999999999999998
Q ss_pred CCCCCcCCCceEec---chhhhccc---cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHH
Q psy9583 546 SFPGVKFDENLILS---NKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAF 618 (866)
Q Consensus 546 ~~p~~~~~~~~~~t---~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~ 618 (866)
.+|+.+.....+++ .+++..+. ..+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++...+.
T Consensus 114 ~~p~~~~~~~~v~~~~~~~da~~l~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~ 193 (396)
T PRK09754 114 PLPLLDALGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLL 193 (396)
T ss_pred CCCCCCcCCCCEEecCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCcchhhhcCHHHHHHHH
Confidence 77765544444554 34544433 2478999999999999999999999999999999999886 46888999999
Q ss_pred HHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeC
Q psy9583 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVN 698 (866)
Q Consensus 619 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd 698 (866)
+.++++||++++++.+++++. ++.+.+.+. +|. ++++|.|++++|.+||+.+ ++.++++.+ |+|.||
T Consensus 194 ~~l~~~GV~i~~~~~V~~i~~-~~~~~v~l~--~g~------~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~--~gi~vd 260 (396)
T PRK09754 194 QRHQQAGVRILLNNAIEHVVD-GEKVELTLQ--SGE------TLQADVVIYGIGISANDQL--AREANLDTA--NGIVID 260 (396)
T ss_pred HHHHHCCCEEEeCCeeEEEEc-CCEEEEEEC--CCC------EEECCEEEECCCCChhhHH--HHhcCCCcC--CCEEEC
Confidence 999999999999999999976 344444443 665 7999999999999999876 467787764 459999
Q ss_pred CCCCCCCCCEEEecccCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHh
Q psy9583 699 DNCETNIPNIYAIGDVVRG---------PMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKK 769 (866)
Q Consensus 699 ~~l~Ts~~~VyA~GD~a~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~ 769 (866)
++|||++|+|||+|||+.. +.+|+.|..||++||+||+|...++......|..+++..+.++|....+
T Consensus 261 ~~~~ts~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~ni~g~~~~~~~~p~~~~~~~~~~~~~~G~~~~~--- 337 (396)
T PRK09754 261 EACRTCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQIAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDMRGD--- 337 (396)
T ss_pred CCCccCCCCEEEccceEeeeCCCCCEEEECcHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeCCccEEEeeCCCCC---
Confidence 9999999999999999952 2468999999999999999987665443444555677899999975421
Q ss_pred cCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCC
Q psy9583 770 HNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRAS 834 (866)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~ 834 (866)
++.+ . . ..+...|+.+++ ++|+|+|+..+|+. .-...+..+|..+..
T Consensus 338 ---~~~~-~---~-------~~~~~~~~~~~~--~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~ 384 (396)
T PRK09754 338 ---DWLC-R---G-------NPETQKAIWFNL--QNGVLIGAVTLNQG--REIRPIRKWIQSGKT 384 (396)
T ss_pred ---EEEE-e---c-------CCCCceEEEEEe--eCCEEEEEEEECCH--HHHHHHHHHHHCCCC
Confidence 1111 0 0 012233444444 47999999999985 233445566777655
No 60
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=100.00 E-value=4.1e-36 Score=335.91 Aligned_cols=349 Identities=17% Similarity=0.256 Sum_probs=253.7
Q ss_pred cceeeecCCccHHHHHHHHHHCC--CeEEEEeccCC-CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKD-NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~-~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||||||||+||+++|..|++.+ .+|+||++++. +|.++.+ ++ . +. .+.
T Consensus 3 ~~vvIiG~G~AG~~~a~~lr~~~~~~~Itvi~~~~~~~y~~~~l-----------~~-------~-------~~-~~~-- 54 (377)
T PRK04965 3 NGIVIIGSGFAARQLVKNIRKQDAHIPITLITADSGDEYNKPDL-----------SH-------V-------FS-QGQ-- 54 (377)
T ss_pred CCEEEECCcHHHHHHHHHHHhhCcCCCEEEEeCCCCCCcCcCcC-----------cH-------H-------Hh-CCC--
Confidence 68999999999999999999864 67999998732 1111110 00 0 00 000
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
....+.. .....++++++++++.+..+. ++. ..+.+.. ++..+.||+||||||+.|..
T Consensus 55 -----~~~~~~~----------~~~~~~~~~~gv~~~~~~~V~~id~---~~~~v~~---~~~~~~yd~LVlATG~~~~~ 113 (377)
T PRK04965 55 -----RADDLTR----------QSAGEFAEQFNLRLFPHTWVTDIDA---EAQVVKS---QGNQWQYDKLVLATGASAFV 113 (377)
T ss_pred -----CHHHhhc----------CCHHHHHHhCCCEEECCCEEEEEEC---CCCEEEE---CCeEEeCCEEEECCCCCCCC
Confidence 1111110 112345677899998876554 544 3344443 45689999999999999987
Q ss_pred CCCCcCCCceEecchh---hhcc---ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-ccHHHHHHHHH
Q psy9583 547 FPGVKFDENLILSNKG---ALEM---INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKKAFH 619 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~---~~~~---~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-~d~~~~~~l~~ 619 (866)
|+.++... +++..+ +... ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. ++++....+++
T Consensus 114 p~i~G~~~--v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 191 (377)
T PRK04965 114 PPIPGREL--MLTLNSQQEYRAAETQLRDAQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASLMPPEVSSRLQH 191 (377)
T ss_pred CCCCCCce--EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCcccchhCCHHHHHHHHH
Confidence 76554332 444332 2221 135789999999999999999999999999999999998864 68899999999
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
.|++.||++++++.++++..+++.+.+.+. +|. ++++|.||+|+|.+|+..+ ++.+|++.+ +| |.||+
T Consensus 192 ~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~--~g~------~i~~D~vI~a~G~~p~~~l--~~~~gl~~~-~g-i~vd~ 259 (377)
T PRK04965 192 RLTEMGVHLLLKSQLQGLEKTDSGIRATLD--SGR------SIEVDAVIAAAGLRPNTAL--ARRAGLAVN-RG-IVVDS 259 (377)
T ss_pred HHHhCCCEEEECCeEEEEEccCCEEEEEEc--CCc------EEECCEEEECcCCCcchHH--HHHCCCCcC-CC-EEECC
Confidence 999999999999999999877666666554 665 8999999999999999987 577788875 56 99999
Q ss_pred CCCCCCCCEEEecccCCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCCcc-EEEEccCceeeeecCHHHHHhcCCcE
Q psy9583 700 NCETNIPNIYAIGDVVRGP----MLAHKAEEEGIMVAEHISGQKHSINFNALP-FVIYTFPEIASVGKTEQYLKKHNISY 774 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~~----~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p-~~~~~~~~~a~vGl~e~~a~~~~~~~ 774 (866)
+|||++|||||+|||+..+ ..+..|++||++||+||+|....+.....+ ...+.+.++.++|.... ... .
T Consensus 260 ~l~ts~~~VyA~GD~a~~~~~~~~~~~~a~~~g~~~a~n~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~-~ 334 (377)
T PRK04965 260 YLQTSAPDIYALGDCAEINGQVLPFLQPIQLSAMALAKNLLGQNTPLKLPAMLVKVKTPELPLQLAGETQR----QDL-R 334 (377)
T ss_pred CcccCCCCEEEeeecEeECCceeehHHHHHHHHHHHHHHhcCCCcccccCCccEEEecCceeeEECCCCCC----CCc-e
Confidence 9999999999999999633 357889999999999999988776654443 44577889999997542 110 0
Q ss_pred EEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHH
Q psy9583 775 NVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASE 820 (866)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e 820 (866)
.. +. ..+...|.|+++ ++|+|+|+.++|+.+.+
T Consensus 335 ~~--~~---------~~~~~~~~~~~~--~~~~l~g~~~~g~~~~~ 367 (377)
T PRK04965 335 WQ--IN---------AESQGMVAKGVD--EAGQLRAFVVSEDRMKE 367 (377)
T ss_pred EE--EE---------eCCCCeEEEEEc--cCCcEEEEEEEChhHHH
Confidence 11 00 112334556666 47999999999997544
No 61
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit.
Probab=100.00 E-value=6.3e-36 Score=360.14 Aligned_cols=367 Identities=20% Similarity=0.292 Sum_probs=267.5
Q ss_pred eeeecCCccHHHHHHHHHHC---CCeEEEEeccCCC-cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 393 VIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDN-EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 393 VvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~-~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
|||||||+||++||.+|++. +++|+||++++++ |.+..+ + . + + . |
T Consensus 1 iVIIG~G~AG~~aa~~l~~~~~~~~~Itvi~~e~~~~y~r~~L----------~-~-~-------------l-~-g---- 49 (785)
T TIGR02374 1 LVLVGNGMAGHRCIEEVLKLNRHMFEITIFGEEPHPNYNRILL----------S-S-V-------------L-Q-G---- 49 (785)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCCeEEEEeCCCCCCcccccc----------c-H-H-------------H-C-C----
Confidence 68999999999999999876 4789999997421 111000 0 0 0 0 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
..+...+. .....++++.+|+++.++.+. ++. ..+. |.+.++.++.||+||||||+.|+.|
T Consensus 50 --~~~~~~l~-----------~~~~~~~~~~gv~~~~g~~V~~Id~---~~k~--V~~~~g~~~~yD~LVlATGs~p~~p 111 (785)
T TIGR02374 50 --EADLDDIT-----------LNSKDWYEKHGITLYTGETVIQIDT---DQKQ--VITDAGRTLSYDKLILATGSYPFIL 111 (785)
T ss_pred --CCCHHHcc-----------CCCHHHHHHCCCEEEcCCeEEEEEC---CCCE--EEECCCcEeeCCEEEECCCCCcCCC
Confidence 00111111 112345677899999987655 554 3343 4445677899999999999999877
Q ss_pred CCCcCCCceEec---chhhhccc---cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHHHH
Q psy9583 548 PGVKFDENLILS---NKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAFHL 620 (866)
Q Consensus 548 p~~~~~~~~~~t---~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~~~ 620 (866)
|.++.+...+++ .+++..+. ..+++++|||||++|+|+|..|.++|.+|+++++.+++++ .+|++....+.+.
T Consensus 112 ~ipG~~~~~v~~~rt~~d~~~i~~~~~~~k~vvVVGgG~~GlE~A~~L~~~G~~Vtvv~~~~~ll~~~ld~~~~~~l~~~ 191 (785)
T TIGR02374 112 PIPGADKKGVYVFRTIEDLDAIMAMAQRFKKAAVIGGGLLGLEAAVGLQNLGMDVSVIHHAPGLMAKQLDQTAGRLLQRE 191 (785)
T ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEccCCchhhhhcCHHHHHHHHHH
Confidence 666544444443 33333322 3578999999999999999999999999999999999886 5899999999999
Q ss_pred HHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCC
Q psy9583 621 LNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDN 700 (866)
Q Consensus 621 l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~ 700 (866)
|++.||++++++.++++..++....+.+. +|. .+++|.|++++|++|++++ +++++++++ |+|.||++
T Consensus 192 l~~~GV~v~~~~~v~~i~~~~~~~~v~~~--dG~------~i~~D~Vi~a~G~~Pn~~l--a~~~gl~~~--ggI~Vd~~ 259 (785)
T TIGR02374 192 LEQKGLTFLLEKDTVEIVGATKADRIRFK--DGS------SLEADLIVMAAGIRPNDEL--AVSAGIKVN--RGIIVNDS 259 (785)
T ss_pred HHHcCCEEEeCCceEEEEcCCceEEEEEC--CCC------EEEcCEEEECCCCCcCcHH--HHhcCCccC--CCEEECCC
Confidence 99999999999999999865544445554 665 8999999999999999987 577788875 55999999
Q ss_pred CCCCCCCEEEecccCCCC----CcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEE-EEccCceeeeecCHHHHHhcCCcE
Q psy9583 701 CETNIPNIYAIGDVVRGP----MLAHKAEEEGIMVAEHISGQK-HSINFNALPFV-IYTFPEIASVGKTEQYLKKHNISY 774 (866)
Q Consensus 701 l~Ts~~~VyA~GD~a~~~----~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~-~~~~~~~a~vGl~e~~a~~~~~~~ 774 (866)
|||++|+|||+|||+..+ .++..|..||+++|.||+|.. .++........ .+.+.+++++|....... .
T Consensus 260 ~~Ts~p~IyA~GD~a~~~~~~~gl~~~a~~qa~vaA~ni~g~~~~~~~~~~~~~~lk~~g~~v~s~G~~~~~~~-----~ 334 (785)
T TIGR02374 260 MQTSDPDIYAVGECAEHNGRVYGLVAPLYEQAKVLADHICGVECEEYEGSDLSAKLKLLGVDVWSAGDAQETER-----T 334 (785)
T ss_pred cccCCCCEEEeeecceeCCcccccHHHHHHHHHHHHHHhcCCCCcCCCCCccceEEEECCcceEecccCCCCCC-----c
Confidence 999999999999999643 478889999999999999977 55555444433 478889999997653211 1
Q ss_pred EEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHH
Q psy9583 775 NVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDI 838 (866)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l 838 (866)
....+. ......|.|++++ +++|+|++++|+.. + ...+..++.++..+.+.
T Consensus 335 ~~~~~~---------d~~~~~y~kl~~~--~~rLlGavlvgd~~-~-~~~L~~li~~~~~l~~~ 385 (785)
T TIGR02374 335 TSIKIY---------DEQKGIYKKLVLS--DDKLLGAVLFGDTS-D-YGRLLDMVLKQADISED 385 (785)
T ss_pred EEEEEE---------cCCCCEEEEEEEE--CCEEEEEEEECCHH-H-HHHHHHHHHcCCCCCcC
Confidence 111111 1234568999996 46899999999863 3 34556667777655443
No 62
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (PFAM:PF00070).
Probab=100.00 E-value=3.2e-32 Score=295.66 Aligned_cols=292 Identities=24% Similarity=0.315 Sum_probs=210.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
|||+|||||+||++||..|++.|++|+|||+. .+||.|.....+. . +. +++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-------~~gg~~~~~~~~~---------------~-~~--~~~~--- 52 (300)
T TIGR01292 1 YDVIIIGAGPAGLTAAIYAARANLKTLIIEGM-------EPGGQLTTTTEVE---------------N-YP--GFPE--- 52 (300)
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecc-------CCCcceeeccccc---------------c-cC--CCCC---
Confidence 68999999999999999999999999999986 3677654321110 0 00 0000
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGV 550 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~~ 550 (866)
......+ ...+...+++.++++++.....++. ....+.+...++.++.||+||+|||+.|..++.+
T Consensus 53 ~~~~~~~-----------~~~l~~~~~~~gv~~~~~~v~~v~~---~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~i~ 118 (300)
T TIGR01292 53 GISGPEL-----------MEKMKEQAVKFGAEIIYEEVIKVDL---SDRPFKVKTGDGKEYTAKAVIIATGASARKLGIP 118 (300)
T ss_pred CCChHHH-----------HHHHHHHHHHcCCeEEEEEEEEEEe---cCCeeEEEeCCCCEEEeCEEEECCCCCcccCCCC
Confidence 0000111 1223445677899998855544543 3345566655667899999999999988755433
Q ss_pred cCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHc-CC
Q psy9583 551 KFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ-GL 626 (866)
Q Consensus 551 ~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~-GV 626 (866)
+.. ...+............+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. ...+.+.|++. ||
T Consensus 119 g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~~~~V~~v~~~~~~~~------~~~~~~~l~~~~gv 192 (300)
T TIGR01292 119 GEDEFLGRGVSYCATCDGPFFKNKEVAVVGGGDSAIEEALYLTRIAKKVTLVHRRDKFRA------EKILLDRLRKNPNI 192 (300)
T ss_pred ChhhcCCccEEEeeecChhhcCCCEEEEECCChHHHHHHHHHHhhcCEEEEEEeCcccCc------CHHHHHHHHhCCCe
Confidence 321 112221111111223468999999999999999999999999999999876532 23456667777 99
Q ss_pred EEEeCceEEEEEEcCCeEEEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
++++++.++++..++....+.+.. .++. ..++++|.+++|+|++|+.+++ +.. +.++++|++.||++++|++
T Consensus 193 ~~~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~i~~D~vi~a~G~~~~~~~l--~~~-~~~~~~g~i~v~~~~~t~~ 265 (300)
T TIGR01292 193 EFLWNSTVKEIVGDNKVEGVKIKNTVTGE----EEELKVDGVFIAIGHEPNTELL--KGL-LELDEGGYIVTDEGMRTSV 265 (300)
T ss_pred EEEeccEEEEEEccCcEEEEEEEecCCCc----eEEEEccEEEEeeCCCCChHHH--HHh-heecCCCcEEECCCCccCC
Confidence 999999999998755333344432 1222 3589999999999999999874 555 6778889999999999999
Q ss_pred CCEEEecccCC-CCCcHHHHHHHHHHHHHHHhC
Q psy9583 706 PNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 706 ~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g 737 (866)
|+||++|||++ .++.+..|+.||+.||.+|..
T Consensus 266 ~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 298 (300)
T TIGR01292 266 PGVFAAGDVRDKGYRQAVTAAGDGCIAALSAER 298 (300)
T ss_pred CCEEEeecccCcchhhhhhhhhhHHHHHHHHHh
Confidence 99999999998 678899999999999999863
No 63
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=100.00 E-value=3.9e-33 Score=301.50 Aligned_cols=285 Identities=21% Similarity=0.335 Sum_probs=216.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+.+|||||||++|+.+|.+|.+.- .+|+|||+.++. + .....++ .....++.
T Consensus 3 ~~~iVIlGgGfgGl~~a~~l~~~~~~~~itLVd~~~~h-----l----------------~~plL~e-----va~g~l~~ 56 (405)
T COG1252 3 KKRIVILGGGFGGLSAAKRLARKLPDVEITLVDRRDYH-----L----------------FTPLLYE-----VATGTLSE 56 (405)
T ss_pred CceEEEECCcHHHHHHHHHhhhcCCCCcEEEEeCCCcc-----c----------------cchhhhh-----hhcCCCCh
Confidence 378999999999999999999974 899999997311 0 1111111 11111222
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.....+ +...+++. +++++.+++..+|. +.++|.+ .++..+.||+||+|+|+.+..
T Consensus 57 ~~i~~p------------------~~~~~~~~~~v~~~~~~V~~ID~---~~k~V~~--~~~~~i~YD~LVvalGs~~~~ 113 (405)
T COG1252 57 SEIAIP------------------LRALLRKSGNVQFVQGEVTDIDR---DAKKVTL--ADLGEISYDYLVVALGSETNY 113 (405)
T ss_pred hheecc------------------HHHHhcccCceEEEEEEEEEEcc---cCCEEEe--CCCccccccEEEEecCCcCCc
Confidence 111222 33445544 49999999988776 5566665 445689999999999999875
Q ss_pred C--CCCcCCCceEecchhhhcccc-----------CC-----CeEEEECCcHHHHHHHHHHHhcC-------------Cc
Q psy9583 547 F--PGVKFDENLILSNKGALEMIN-----------VP-----KKLCIIGAGVIGLEIGSIWRRLG-------------SE 595 (866)
Q Consensus 547 ~--p~~~~~~~~~~t~~~~~~~~~-----------~~-----~~vvVIGgG~~glE~A~~l~~~g-------------~~ 595 (866)
+ ||.......+.+.+++.+++. .. -+++|+|||++|+|+|..|+++- .+
T Consensus 114 fgi~G~~E~a~~lks~edA~~ir~~l~~~fe~a~~~~~~~~~lti~IvGgG~TGVElAgeL~~~~~~l~~~~~~~~~~~~ 193 (405)
T COG1252 114 FGIPGAAEYAFGLKTLEDALRLRRHLLEAFEKASQEEDDRALLTIVIVGGGPTGVELAGELAERLHRLLKKFRVDPSELR 193 (405)
T ss_pred CCCCCHHHhCCCCCCHHHHHHHHHHHHHHHHHhhccccccceeEEEEECCChhHHHHHHHHHHHHHHHhhhhcCCccccE
Confidence 5 343333344445566544321 12 26999999999999999888652 28
Q ss_pred EEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 596 VTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 596 Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
|+++++.+++++.+++.+++++++.|++.||++++++.|++++.+. +++. +|. .++++|.+||++|.++
T Consensus 194 V~LVea~p~ILp~~~~~l~~~a~~~L~~~GV~v~l~~~Vt~v~~~~----v~~~--~g~-----~~I~~~tvvWaaGv~a 262 (405)
T COG1252 194 VILVEAGPRILPMFPPKLSKYAERALEKLGVEVLLGTPVTEVTPDG----VTLK--DGE-----EEIPADTVVWAAGVRA 262 (405)
T ss_pred EEEEccCchhccCCCHHHHHHHHHHHHHCCCEEEcCCceEEECCCc----EEEc--cCC-----eeEecCEEEEcCCCcC
Confidence 9999999999999999999999999999999999999999998765 4454 443 1599999999999999
Q ss_pred CCCCCCccc-cCeeecCCCcEEeCCCCCC-CCCCEEEecccCC------CCCcHHHHHHHHHHHHHHHhC
Q psy9583 676 NTNNLNIDK-IGLKVNENNFIIVNDNCET-NIPNIYAIGDVVR------GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 676 ~~~~l~l~~-~gl~~~~~G~i~Vd~~l~T-s~~~VyA~GD~a~------~~~~~~~A~~~g~~aa~~i~g 737 (866)
+.-. ++ .+++.|..|++.||++|++ ++|+|||+|||+. .|+.++.|++||+++|+||..
T Consensus 263 ~~~~---~~l~~~e~dr~Grl~V~~~L~~~~~~~IFa~GD~A~~~~~~p~P~tAQ~A~Qqg~~~a~ni~~ 329 (405)
T COG1252 263 SPLL---KDLSGLETDRRGRLVVNPTLQVPGHPDIFAAGDCAAVIDPRPVPPTAQAAHQQGEYAAKNIKA 329 (405)
T ss_pred Chhh---hhcChhhhccCCCEEeCCCcccCCCCCeEEEeccccCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence 8764 55 4788888899999999996 7999999999995 257899999999999999974
No 64
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=310.88 Aligned_cols=310 Identities=18% Similarity=0.246 Sum_probs=222.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+++|||||||+||+.+|.+|.+.+++|+|||++++.+..+ .... .. .|
T Consensus 10 ~~~vVIvGgG~aGl~~a~~L~~~~~~ItlI~~~~~~~~~~---------------------~l~~-----~~-~g----- 57 (424)
T PTZ00318 10 KPNVVVLGTGWAGAYFVRNLDPKKYNITVISPRNHMLFTP---------------------LLPQ-----TT-TG----- 57 (424)
T ss_pred CCeEEEECCCHHHHHHHHHhCcCCCeEEEEcCCCCcchhh---------------------hHHH-----hc-cc-----
Confidence 4789999999999999999987789999999873211100 0000 00 00
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEc--------CCceEEEecEEEEecC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIIN--------KTKETITAKYIIIATG 541 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~--------~~g~~i~~d~lViATG 541 (866)
..++...... +...++..+++++.+.+..++. ..+.+.+.. +++.++.||+||||||
T Consensus 58 -~~~~~~~~~~-----------~~~~~~~~~~~~i~~~V~~Id~---~~~~v~~~~~~~~~~~~~~g~~i~yD~LViAtG 122 (424)
T PTZ00318 58 -TLEFRSICEP-----------VRPALAKLPNRYLRAVVYDVDF---EEKRVKCGVVSKSNNANVNTFSVPYDKLVVAHG 122 (424)
T ss_pred -CCChHHhHHH-----------HHHHhccCCeEEEEEEEEEEEc---CCCEEEEecccccccccCCceEecCCEEEECCC
Confidence 1111111111 2334566789999988877765 456666621 3456899999999999
Q ss_pred CCCcCCCCCcCCC--ceEecchhhhccc--------------------cCCCeEEEECCcHHHHHHHHHHHh--------
Q psy9583 542 SKARSFPGVKFDE--NLILSNKGALEMI--------------------NVPKKLCIIGAGVIGLEIGSIWRR-------- 591 (866)
Q Consensus 542 s~p~~~p~~~~~~--~~~~t~~~~~~~~--------------------~~~~~vvVIGgG~~glE~A~~l~~-------- 591 (866)
+.+..++.++... ..+.+..++..+. ...++++|||||++|+|+|..|..
T Consensus 123 s~~~~~~ipG~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~GvE~A~~l~~~~~~~~~~ 202 (424)
T PTZ00318 123 ARPNTFNIPGVEERAFFLKEVNHARGIRKRIVQCIERASLPTTSVEERKRLLHFVVVGGGPTGVEFAAELADFFRDDVRN 202 (424)
T ss_pred cccCCCCCCCHHHcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCChHHHhccCEEEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence 9987554333221 1122222221110 012489999999999999999876
Q ss_pred ------cCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEecc
Q psy9583 592 ------LGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFD 665 (866)
Q Consensus 592 ------~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D 665 (866)
.+.+|+++++.+++++.+++++.+.+++.|+++||+++++++|+++..+ . +.+. +|+ ++++|
T Consensus 203 ~~~~~~~~~~Vtlv~~~~~ll~~~~~~~~~~~~~~L~~~gV~v~~~~~v~~v~~~--~--v~~~--~g~------~i~~d 270 (424)
T PTZ00318 203 LNPELVEECKVTVLEAGSEVLGSFDQALRKYGQRRLRRLGVDIRTKTAVKEVLDK--E--VVLK--DGE------VIPTG 270 (424)
T ss_pred hhhcccccCEEEEEcCCCcccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEeCC--E--EEEC--CCC------EEEcc
Confidence 3689999999999999999999999999999999999999999998743 2 3443 565 89999
Q ss_pred EEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCC-CCCCCEEEecccCCC-----CCcHHHHHHHHHHHHHHHhCCC
Q psy9583 666 KLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE-TNIPNIYAIGDVVRG-----PMLAHKAEEEGIMVAEHISGQK 739 (866)
Q Consensus 666 ~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~-Ts~~~VyA~GD~a~~-----~~~~~~A~~~g~~aa~~i~g~~ 739 (866)
.+++++|.+|+. + ++.++++++++|+|.||++|| |++|||||+|||+.. |+.+..|++||+++|+||....
T Consensus 271 ~vi~~~G~~~~~-~--~~~~~l~~~~~G~I~Vd~~l~~~~~~~IfAiGD~a~~~~~~~~~~~~~A~~qg~~~A~ni~~~l 347 (424)
T PTZ00318 271 LVVWSTGVGPGP-L--TKQLKVDKTSRGRISVDDHLRVKPIPNVFALGDCAANEERPLPTLAQVASQQGVYLAKEFNNEL 347 (424)
T ss_pred EEEEccCCCCcc-h--hhhcCCcccCCCcEEeCCCcccCCCCCEEEEeccccCCCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 999999999984 4 467788888889999999999 699999999999973 5789999999999999997542
Q ss_pred CCCCCCCccEEEEccCceeeeec
Q psy9583 740 HSINFNALPFVIYTFPEIASVGK 762 (866)
Q Consensus 740 ~~~~~~~~p~~~~~~~~~a~vGl 762 (866)
... ....|+.....+.+.++|-
T Consensus 348 ~g~-~~~~~~~~~~~g~~~~lG~ 369 (424)
T PTZ00318 348 KGK-PMSKPFVYRSLGSLAYLGN 369 (424)
T ss_pred cCC-CCCCCCeecCCceEEEecC
Confidence 111 1233444444456666663
No 65
>PRK10262 thioredoxin reductase; Provisional
Probab=100.00 E-value=5.7e-32 Score=295.95 Aligned_cols=298 Identities=20% Similarity=0.286 Sum_probs=212.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+.+||+||||||||++||..|+++|+++++||+. .+||.|.....+ ++++..
T Consensus 5 ~~~~vvIIGgGpaGl~aA~~l~~~g~~~~~ie~~-------~~gg~~~~~~~~---------------------~~~~~~ 56 (321)
T PRK10262 5 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-------EKGGQLTTTTEV---------------------ENWPGD 56 (321)
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCeEEEEee-------cCCCceecCceE---------------------CCCCCC
Confidence 4699999999999999999999999999999963 678876433211 111111
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
....++..+..+ +......+++++..+....++. ....+.+..+. ..+.||+||+|||+.|+.|+
T Consensus 57 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v~~v~~---~~~~~~v~~~~-~~~~~d~vilAtG~~~~~~~ 121 (321)
T PRK10262 57 PNDLTGPLLMER-----------MHEHATKFETEIIFDHINKVDL---QNRPFRLTGDS-GEYTCDALIIATGASARYLG 121 (321)
T ss_pred CCCCCHHHHHHH-----------HHHHHHHCCCEEEeeEEEEEEe---cCCeEEEEecC-CEEEECEEEECCCCCCCCCC
Confidence 112233333222 2334455667777665433332 23556665433 36899999999999988665
Q ss_pred CCcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 549 GVKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 549 ~~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
.++.. ...+............+++++|||+|++|+|+|..|++.+++|+++++.+.+. .++.+.+.+++.|++.|
T Consensus 122 i~g~~~~~~~~v~~~~~~~~~~~~g~~vvVvGgG~~g~e~A~~l~~~~~~Vtlv~~~~~~~--~~~~~~~~~~~~l~~~g 199 (321)
T PRK10262 122 LPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGN 199 (321)
T ss_pred CCCHHHcCCCcEEEeecCCHHHcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEECCccC--CCHHHHHHHHhhccCCC
Confidence 44322 22222222222233458999999999999999999999999999999988753 35677888899999999
Q ss_pred CEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC-----
Q psy9583 626 LNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND----- 699 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~----- 699 (866)
|++++++.++++..++.++ .+.+..... .++..++++|.|++++|++||..++ .. ++.++ +|+|.||+
T Consensus 200 V~i~~~~~v~~v~~~~~~~~~v~~~~~~~--~~~~~~i~~D~vv~a~G~~p~~~l~--~~-~l~~~-~g~i~vd~~~~~~ 273 (321)
T PRK10262 200 IILHTNRTLEEVTGDQMGVTGVRLRDTQN--SDNIESLDVAGLFVAIGHSPNTAIF--EG-QLELE-NGYIKVQSGIHGN 273 (321)
T ss_pred eEEEeCCEEEEEEcCCccEEEEEEEEcCC--CCeEEEEECCEEEEEeCCccChhHh--hc-ccccc-CCEEEECCCCccc
Confidence 9999999999998765333 344542211 1123479999999999999999874 32 46654 68899997
Q ss_pred CCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 700 NCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
+++|++|+|||+|||++. +.....|+.+|..||..|..
T Consensus 274 ~~~t~~~~VyA~GD~~~~~~~~~~~A~~~g~~Aa~~~~~ 312 (321)
T PRK10262 274 ATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAER 312 (321)
T ss_pred ccccCCCCEEECeeccCCCcceEEEEehhHHHHHHHHHH
Confidence 789999999999999964 45677799999999998854
No 66
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=100.00 E-value=8.1e-32 Score=311.75 Aligned_cols=292 Identities=23% Similarity=0.313 Sum_probs=212.8
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
..|||+||||||||++||..|++.|++|+||++ .+||.|...-.++ + + .+.+
T Consensus 211 ~~~dVvIIGgGpAGl~AA~~la~~G~~v~li~~--------~~GG~~~~~~~~~---------------~-~--~~~~-- 262 (515)
T TIGR03140 211 DPYDVLVVGGGPAGAAAAIYAARKGLRTAMVAE--------RIGGQVKDTVGIE---------------N-L--ISVP-- 262 (515)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEec--------CCCCccccCcCcc---------------c-c--cccC--
Confidence 359999999999999999999999999999974 5788764321110 0 0 0010
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
...+.++. ..+...+++++++++.+..+. ++. ..+.+.+...++..+.||++|+|||+.|+.+
T Consensus 263 --~~~~~~l~-----------~~l~~~l~~~gv~i~~~~~V~~I~~---~~~~~~v~~~~g~~i~~d~lIlAtGa~~~~~ 326 (515)
T TIGR03140 263 --YTTGSQLA-----------ANLEEHIKQYPIDLMENQRAKKIET---EDGLIVVTLESGEVLKAKSVIVATGARWRKL 326 (515)
T ss_pred --CCCHHHHH-----------HHHHHHHHHhCCeEEcCCEEEEEEe---cCCeEEEEECCCCEEEeCEEEECCCCCcCCC
Confidence 11222222 224455677899998876555 332 2244556556667899999999999998765
Q ss_pred CCCcC---CCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH-
Q psy9583 548 PGVKF---DENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK- 623 (866)
Q Consensus 548 p~~~~---~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~- 623 (866)
+.++. ....++...........+++++|||||++|+|+|..|+..+.+|+++++.+.+.. ...+.+.|++
T Consensus 327 ~ipG~~~~~~~~v~~~~~~~~~~~~~k~VvViGgG~~g~E~A~~L~~~g~~Vtli~~~~~l~~------~~~l~~~l~~~ 400 (515)
T TIGR03140 327 GVPGEKEYIGKGVAYCPHCDGPFFKGKDVAVIGGGNSGIEAAIDLAGIVRHVTVLEFADELKA------DKVLQDKLKSL 400 (515)
T ss_pred CCCCHHHcCCCeEEEeeccChhhcCCCEEEEECCcHHHHHHHHHHHhcCcEEEEEEeCCcCCh------hHHHHHHHhcC
Confidence 44331 1122222222111223578999999999999999999999999999998887643 2345667776
Q ss_pred cCCEEEeCceEEEEEEcCCeEE-EEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 624 QGLNIILNTKIHDIKINKENVL-INYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~~-v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
.||++++++.++++..+++.+. +.+.+. ++. ..++++|.|++++|++|+++++ +.. ++++++|+|.||+++
T Consensus 401 ~gV~i~~~~~v~~i~~~~~~v~~v~~~~~~~~~----~~~i~~D~vi~a~G~~Pn~~~l--~~~-~~~~~~G~I~vd~~~ 473 (515)
T TIGR03140 401 PNVDILTSAQTTEIVGDGDKVTGIRYQDRNSGE----EKQLDLDGVFVQIGLVPNTEWL--KDA-VELNRRGEIVIDERG 473 (515)
T ss_pred CCCEEEECCeeEEEEcCCCEEEEEEEEECCCCc----EEEEEcCEEEEEeCCcCCchHH--hhh-cccCCCCeEEECCCC
Confidence 6999999999999987655543 555432 222 3479999999999999999984 444 778888999999999
Q ss_pred CCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHHhC
Q psy9583 702 ETNIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i~g 737 (866)
||++|+|||+|||++.+ .++..|+.+|..||.+|..
T Consensus 474 ~Ts~p~IyAaGDv~~~~~~~~~~A~~~G~~Aa~~i~~ 510 (515)
T TIGR03140 474 RTSVPGIFAAGDVTTVPYKQIIIAMGEGAKAALSAFD 510 (515)
T ss_pred CCCCCCEEEcccccCCccceEEEEEccHHHHHHHHHH
Confidence 99999999999999855 5778999999999999865
No 67
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion]
Probab=100.00 E-value=7.1e-32 Score=299.60 Aligned_cols=371 Identities=20% Similarity=0.279 Sum_probs=274.3
Q ss_pred cceeeecCCccHHHHHHHHHHC---CCeEEEEeccCCC-cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDN-EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~-~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
.+++|||.|+||..+...+.+. -+++++|-.++++ |.+..+.-. ++
T Consensus 4 ~klvvvGnGmag~r~iEell~~~~~~~~iTvfg~Ep~~nY~Ri~Ls~v------------------------------l~ 53 (793)
T COG1251 4 QKLVIIGNGMAGHRTIEELLESAPDLYDITVFGEEPRPNYNRILLSSV------------------------------LA 53 (793)
T ss_pred eeEEEEecccchhhHHHHHHhcCcccceEEEeccCCCccccceeeccc------------------------------cC
Confidence 6799999999999999999884 3789999776432 222111000 00
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
. .-++.++.- .-..|+++++|+++.+..+. ++. ....|.++.|+++.||+||+||||.|+
T Consensus 54 ~---~~~~edi~l-----------~~~dwy~~~~i~L~~~~~v~~idr-----~~k~V~t~~g~~~~YDkLilATGS~pf 114 (793)
T COG1251 54 G---EKTAEDISL-----------NRNDWYEENGITLYTGEKVIQIDR-----ANKVVTTDAGRTVSYDKLIIATGSYPF 114 (793)
T ss_pred C---CccHHHHhc-----------cchhhHHHcCcEEEcCCeeEEecc-----CcceEEccCCcEeecceeEEecCcccc
Confidence 0 001111111 12457889999999998887 555 444555678899999999999999999
Q ss_pred CCCCCcCCCceEecchhh---hccc---cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-CcccHHHHHHHH
Q psy9583 546 SFPGVKFDENLILSNKGA---LEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-NTVDEEIAKKAF 618 (866)
Q Consensus 546 ~~p~~~~~~~~~~t~~~~---~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-~~~d~~~~~~l~ 618 (866)
.+|+++.+...++..+++ ..+. ...++.+|||||..|+|+|..|...|-++++++..+.++ .++|+.....++
T Consensus 115 i~PiPG~~~~~v~~~R~i~D~~am~~~ar~~~~avVIGGGLLGlEaA~~L~~~Gm~~~Vvh~~~~lMerQLD~~ag~lL~ 194 (793)
T COG1251 115 ILPIPGSDLPGVFVYRTIDDVEAMLDCARNKKKAVVIGGGLLGLEAARGLKDLGMEVTVVHIAPTLMERQLDRTAGRLLR 194 (793)
T ss_pred ccCCCCCCCCCeeEEecHHHHHHHHHHHhccCCcEEEccchhhhHHHHHHHhCCCceEEEeecchHHHHhhhhHHHHHHH
Confidence 988887665555544433 3322 235668999999999999999999999999999999988 489999999999
Q ss_pred HHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeC
Q psy9583 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVN 698 (866)
Q Consensus 619 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd 698 (866)
+.|++.|++++++...+++...+....+.+. +|. .+++|.|++|+|++||.++ ...+|+.++. | |.||
T Consensus 195 ~~le~~Gi~~~l~~~t~ei~g~~~~~~vr~~--DG~------~i~ad~VV~a~GIrPn~el--a~~aGlavnr-G-Ivvn 262 (793)
T COG1251 195 RKLEDLGIKVLLEKNTEEIVGEDKVEGVRFA--DGT------EIPADLVVMAVGIRPNDEL--AKEAGLAVNR-G-IVVN 262 (793)
T ss_pred HHHHhhcceeecccchhhhhcCcceeeEeec--CCC------cccceeEEEecccccccHh--HHhcCcCcCC-C-eeec
Confidence 9999999999999998888764434445554 787 8999999999999999998 7889999984 5 9999
Q ss_pred CCCCCCCCCEEEecccCC----CCCcHHHHHHHHHHHHHHHhCCCC-CCCCCCccEE--EEccCceeeeecCHHHHHhcC
Q psy9583 699 DNCETNIPNIYAIGDVVR----GPMLAHKAEEEGIMVAEHISGQKH-SINFNALPFV--IYTFPEIASVGKTEQYLKKHN 771 (866)
Q Consensus 699 ~~l~Ts~~~VyA~GD~a~----~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~--~~~~~~~a~vGl~e~~a~~~~ 771 (866)
++||||+|+|||+|+|+. .+.+...++.||+++|+|+++... +|.. .+++. ..++.++.+.|--.+ ..+
T Consensus 263 d~mqTsdpdIYAvGEcae~~g~~yGLVaP~yeq~~v~a~hl~~~~~~~y~g-sv~stkLKv~Gvdl~S~GD~~e---~~~ 338 (793)
T COG1251 263 DYMQTSDPDIYAVGECAEHRGKVYGLVAPLYEQAKVLADHLCGGEAEAYEG-SVTSTKLKVSGVDVFSAGDFQE---TEG 338 (793)
T ss_pred ccccccCCCeeehhhHHHhcCccceehhHHHHHHHHHHHHhccCccccccc-ccchhhhcccccceeeccchhh---cCC
Confidence 999999999999999996 467899999999999999998765 3332 22222 345566667764331 112
Q ss_pred CcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccc
Q psy9583 772 ISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARI 841 (866)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~ 841 (866)
.+..+ + .+ .....|-|+++. +++|+|+.++|+.+.- +-+-.+|..+..++++...
T Consensus 339 ~~~iv--~--~D-------~~~~iYKrlvL~--dd~IvgavL~GDt~d~--~~l~~li~~~~~~se~r~~ 393 (793)
T COG1251 339 AESIV--F--RD-------EQRGIYKKLVLK--DDKIVGAVLYGDTSDG--GWLLDLILKGADISEIRDT 393 (793)
T ss_pred CceEE--E--ec-------ccccceeEEEEe--CCeEEEEEEEeecccc--hHHHHHHhcCCCccccchh
Confidence 11111 1 11 123457788884 6799999999996432 2355677888888888765
No 68
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=100.00 E-value=2.1e-31 Score=310.46 Aligned_cols=294 Identities=19% Similarity=0.274 Sum_probs=205.2
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|.+.|||+||||||||++||.+|++.|++|+|||++ .+||.|....++.. +. +..
T Consensus 1 m~~~yDVvIIGgGpAGL~AA~~lar~g~~V~liE~~-------~~GG~~~~~~~i~~----------------~p--g~~ 55 (555)
T TIGR03143 1 MEEIYDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKD-------DFGGQITITSEVVN----------------YP--GIL 55 (555)
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-------CCCceEEecccccc----------------CC--CCc
Confidence 455699999999999999999999999999999984 68888754332210 00 000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
......+.. .+...+++.+++++.+....++. ....+.+.+.++ .+.|++||||||++|+.
T Consensus 56 ----~~~~~~l~~-----------~l~~~~~~~gv~~~~~~V~~i~~---~~~~~~V~~~~g-~~~a~~lVlATGa~p~~ 116 (555)
T TIGR03143 56 ----NTTGPELMQ-----------EMRQQAQDFGVKFLQAEVLDVDF---DGDIKTIKTARG-DYKTLAVLIATGASPRK 116 (555)
T ss_pred ----CCCHHHHHH-----------HHHHHHHHcCCEEeccEEEEEEe---cCCEEEEEecCC-EEEEeEEEECCCCccCC
Confidence 011111111 23345667789987665544443 223345554444 58999999999999987
Q ss_pred CCCCcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 547 FPGVKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 547 ~p~~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
|+.++.. ...++....+......+++++|||||++|+|+|..|.++|.+|+++++.+.+.. +... ..+.++.
T Consensus 117 ~~ipG~~~~~~~~v~~~~~~~~~~~~g~~VvVIGgG~~g~E~A~~L~~~g~~Vtli~~~~~~~~--~~~~---~~~~~~~ 191 (555)
T TIGR03143 117 LGFPGEEEFTGRGVAYCATCDGEFFTGMDVFVIGGGFAAAEEAVFLTRYASKVTVIVREPDFTC--AKLI---AEKVKNH 191 (555)
T ss_pred CCCCCHHHhCCceEEEEeecChhhcCCCEEEEECCCHHHHHHHHHHHccCCEEEEEEeCCcccc--CHHH---HHHHHhC
Confidence 6554421 222222211111223579999999999999999999999999999999887632 2222 2333455
Q ss_pred cCCEEEeCceEEEEEEcCCeEEEEEee-CCCCccceeEE--EeccE----EEEeeccccCCCCCCccccCeeecCCCcEE
Q psy9583 624 QGLNIILNTKIHDIKINKENVLINYSN-KSTNVKTEIIT--SIFDK----LLIAIGRIPNTNNLNIDKIGLKVNENNFII 696 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~--~~~D~----vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 696 (866)
.||++++++.|+++..++....+.+.. .+|. ..+ +.+|. |++++|++|++.++ +. +++++++|+|.
T Consensus 192 ~gV~i~~~~~V~~i~~~~~v~~v~~~~~~~G~----~~~~~~~~D~~~~~Vi~a~G~~Pn~~l~--~~-~l~l~~~G~I~ 264 (555)
T TIGR03143 192 PKIEVKFNTELKEATGDDGLRYAKFVNNVTGE----ITEYKAPKDAGTFGVFVFVGYAPSSELF--KG-VVELDKRGYIP 264 (555)
T ss_pred CCcEEEeCCEEEEEEcCCcEEEEEEEECCCCC----EEEEeccccccceEEEEEeCCCCChhHH--hh-hcccCCCCeEE
Confidence 799999999999998654322233322 2343 223 34676 99999999999974 33 57888889999
Q ss_pred eCCCCCCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHHh
Q psy9583 697 VNDNCETNIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~ 736 (866)
||++++|++|+|||+|||+. .+..+..|+.||+.||.+|.
T Consensus 265 vd~~~~Ts~p~IyAaGDv~~~~~~~v~~A~~~G~~Aa~~i~ 305 (555)
T TIGR03143 265 TNEDMETNVPGVYAAGDLRPKELRQVVTAVADGAIAATSAE 305 (555)
T ss_pred eCCccccCCCCEEEceeccCCCcchheeHHhhHHHHHHHHH
Confidence 99999999999999999985 34567889999999999985
No 69
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-30 Score=276.96 Aligned_cols=290 Identities=23% Similarity=0.304 Sum_probs=211.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCe-EEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~-V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.|||+|||||||||+||.++++.+++ ++|+|+. .+||......-+ .+++..
T Consensus 3 ~~DviIIG~GPAGl~AAiya~r~~l~~~li~~~~-------~~gg~~~~~~~v---------------------enypg~ 54 (305)
T COG0492 3 IYDVIIIGGGPAGLTAAIYAARAGLKVVLILEGG-------EPGGQLTKTTDV---------------------ENYPGF 54 (305)
T ss_pred eeeEEEECCCHHHHHHHHHHHHcCCCcEEEEecC-------CcCCccccceee---------------------cCCCCC
Confidence 59999999999999999999999999 6666663 556533111100 111111
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
........+... ...+....++++.......++. ....+.|.++++. +++++||||||..++.+.
T Consensus 55 ~~~~~g~~L~~~-----------~~~~a~~~~~~~~~~~v~~v~~---~~~~F~v~t~~~~-~~ak~vIiAtG~~~~~~~ 119 (305)
T COG0492 55 PGGILGPELMEQ-----------MKEQAEKFGVEIVEDEVEKVEL---EGGPFKVKTDKGT-YEAKAVIIATGAGARKLG 119 (305)
T ss_pred ccCCchHHHHHH-----------HHHHHhhcCeEEEEEEEEEEee---cCceEEEEECCCe-EEEeEEEECcCCcccCCC
Confidence 111223333333 3344667899988855555543 2127888877766 999999999999887553
Q ss_pred CC---cCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHc-
Q psy9583 549 GV---KFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ- 624 (866)
Q Consensus 549 ~~---~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~- 624 (866)
.+ .+.+..+..+..+.. ...+++++|||||.+++|.|.+|.+.+++||+++|++.+.. .+.+.+.|++.
T Consensus 120 ~~~e~e~~g~gv~yc~~cdg-~~~~k~v~ViGgG~sAve~Al~L~~~a~~Vtlv~r~~~~ra------~~~~~~~l~~~~ 192 (305)
T COG0492 120 VPGEEEFEGKGVSYCATCDG-FFKGKDVVVIGGGDSAVEEALYLSKIAKKVTLVHRRDEFRA------EEILVERLKKNV 192 (305)
T ss_pred CCcchhhcCCceEEeeecCc-cccCCeEEEEcCCHHHHHHHHHHHHhcCeEEEEecCcccCc------CHHHHHHHHhcC
Confidence 22 233333333333333 34578999999999999999999999999999999998766 33445555555
Q ss_pred CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
+|++++++.++++..++ .-.+.+.+..+. ...+.+|.+++++|..|++++ ++..+. ++++|+|+||+.++||
T Consensus 193 ~i~~~~~~~i~ei~G~~-v~~v~l~~~~~~----~~~~~~~gvf~~iG~~p~~~~--~~~~~~-~~~~g~I~v~~~~~Ts 264 (305)
T COG0492 193 KIEVLTNTVVKEILGDD-VEGVVLKNVKGE----EKELPVDGVFIAIGHLPNTEL--LKGLGV-LDENGYIVVDEEMETS 264 (305)
T ss_pred CeEEEeCCceeEEecCc-cceEEEEecCCc----eEEEEeceEEEecCCCCchHH--Hhhccc-cCCCCcEEcCCCcccC
Confidence 89999999999999876 223555432232 468999999999999999988 456566 7889999999999999
Q ss_pred CCCEEEecccCCCCC-cHHHHHHHHHHHHHHHhC
Q psy9583 705 IPNIYAIGDVVRGPM-LAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 705 ~~~VyA~GD~a~~~~-~~~~A~~~g~~aa~~i~g 737 (866)
+|||||||||+..+. ++..|..+|..||.++..
T Consensus 265 vpGifAaGDv~~~~~rqi~ta~~~G~~Aa~~a~~ 298 (305)
T COG0492 265 VPGIFAAGDVADKNGRQIATAAGDGAIAALSAER 298 (305)
T ss_pred CCCEEEeEeeccCcccEEeehhhhHHHHHHHHHH
Confidence 999999999998654 788999999999988754
No 70
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=100.00 E-value=1.4e-31 Score=304.48 Aligned_cols=285 Identities=22% Similarity=0.284 Sum_probs=207.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.+||+|||||+||++||..|++.|++|+|||+. +.+||.+.+ + +|..
T Consensus 133 ~~~V~IIG~G~aGl~aA~~l~~~G~~V~vie~~------~~~GG~l~~-g-ip~~------------------------- 179 (449)
T TIGR01316 133 HKKVAVIGAGPAGLACASELAKAGHSVTVFEAL------HKPGGVVTY-G-IPEF------------------------- 179 (449)
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCcEEEEecC------CCCCcEeee-c-CCCc-------------------------
Confidence 589999999999999999999999999999997 567876532 1 2210
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCC-CCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGS-KARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs-~p~~~p 548 (866)
..+ ..+... ....+++.|++++.+..+. ..+.+ ++. ...||+||||||+ .|+.++
T Consensus 180 -~~~-~~~~~~-----------~~~~l~~~gv~~~~~~~v~--------~~v~~--~~~-~~~yd~viiAtGa~~p~~~~ 235 (449)
T TIGR01316 180 -RLP-KEIVVT-----------EIKTLKKLGVTFRMNFLVG--------KTATL--EEL-FSQYDAVFIGTGAGLPKLMN 235 (449)
T ss_pred -cCC-HHHHHH-----------HHHHHHhCCcEEEeCCccC--------CcCCH--HHH-HhhCCEEEEeCCCCCCCcCC
Confidence 000 011111 1234567899998887431 12222 112 3469999999998 577665
Q ss_pred CCcCCCceEecchhhhcc---------------ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHH
Q psy9583 549 GVKFDENLILSNKGALEM---------------INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEI 613 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~---------------~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~ 613 (866)
.++.+...+++..+++.. ...+++++|||||++|+|+|..+.++|.+|++++++++......
T Consensus 236 ipG~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~l~~~G~~Vtlv~~~~~~~~~~~--- 312 (449)
T TIGR01316 236 IPGEELCGVYSANDFLTRANLMKAYEFPHADTPVYAGKSVVVIGGGNTAVDSARTALRLGAEVHCLYRRTREDMTAR--- 312 (449)
T ss_pred CCCCCCCCcEEHHHHHHHHhhcccccccccCCcccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeecCcccCCCC---
Confidence 554444456665544321 12468999999999999999999999999999999875322111
Q ss_pred HHHHHHHHHHcCCEEEeCceEEEEEEcC-CeE-EEEEee-------CCCC-----ccceeEEEeccEEEEeeccccCCCC
Q psy9583 614 AKKAFHLLNKQGLNIILNTKIHDIKINK-ENV-LINYSN-------KSTN-----VKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 614 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~-~v~~~~-------~~g~-----~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
....+.+++.||++++++.++++..++ +.+ .+.+.. .+|+ ..++...+++|.||+|+|+.|+..+
T Consensus 313 -~~~~~~l~~~GV~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~D~Vi~AiG~~p~~~~ 391 (449)
T TIGR01316 313 -VEEIAHAEEEGVKFHFLCQPVEIIGDEEGNVRAVKFRKMDCQEQIDSGERRFLPCGDAECKLEADAVIVAIGNGSNPIM 391 (449)
T ss_pred -HHHHHHHHhCCCEEEeccCcEEEEEcCCCeEEEEEEEEEEecCcCCCCCeeeeecCCceEEEECCEEEECCCCCCCchh
Confidence 223356788999999999999998653 333 233321 1221 0122357999999999999999876
Q ss_pred CCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 680 LNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 680 l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
++..+++++++|+|.||++++|++|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 392 --l~~~gl~~~~~G~i~vd~~~~Ts~~~VfA~GD~~~g~~~v~~Ai~~G~~AA~~I~~ 447 (449)
T TIGR01316 392 --AETTRLKTSERGTIVVDEDQRTSIPGVFAGGDIILGAATVIRAMGQGKRAAKSINE 447 (449)
T ss_pred --hhccCcccCCCCeEEeCCCCccCCCCEEEecCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 57788999888999999999999999999999998898999999999999999853
No 71
>PRK12831 putative oxidoreductase; Provisional
Probab=99.98 E-value=6.7e-31 Score=299.22 Aligned_cols=287 Identities=23% Similarity=0.290 Sum_probs=208.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
..+||+||||||||++||..|++.|++|+|||+. +.+||.+.+ .+|.. .++
T Consensus 139 ~~~~V~IIG~GpAGl~aA~~l~~~G~~V~v~e~~------~~~GG~l~~--gip~~-------------------~l~-- 189 (464)
T PRK12831 139 KGKKVAVIGSGPAGLTCAGDLAKMGYDVTIFEAL------HEPGGVLVY--GIPEF-------------------RLP-- 189 (464)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEecC------CCCCCeeee--cCCCc-------------------cCC--
Confidence 3589999999999999999999999999999987 568887632 12210 000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc-eEEEecEEEEecCC-CCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK-ETITAKYIIIATGS-KARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs-~p~~ 546 (866)
-..+..+ ...++++.|++++.++.+. ..+.+ ++. ..+.||+||||||+ .|+.
T Consensus 190 -----~~~~~~~-----------~~~~~~~~gv~i~~~~~v~--------~~v~~--~~~~~~~~~d~viiAtGa~~~~~ 243 (464)
T PRK12831 190 -----KETVVKK-----------EIENIKKLGVKIETNVVVG--------KTVTI--DELLEEEGFDAVFIGSGAGLPKF 243 (464)
T ss_pred -----ccHHHHH-----------HHHHHHHcCCEEEcCCEEC--------CcCCH--HHHHhccCCCEEEEeCCCCCCCC
Confidence 0011111 1235667899998887542 11122 122 34579999999998 5877
Q ss_pred CCCCcCCCceEecchhhhcc--------------ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-CCCcccH
Q psy9583 547 FPGVKFDENLILSNKGALEM--------------INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-FLNTVDE 611 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~--------------~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-~l~~~d~ 611 (866)
++.++.+...+++..+++.. ...+++|+|||||++|+|+|..+.++|.+|+++++.+. .++....
T Consensus 244 l~ipG~~~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~va~d~A~~l~r~Ga~Vtlv~r~~~~~m~a~~~ 323 (464)
T PRK12831 244 MGIPGENLNGVFSANEFLTRVNLMKAYKPEYDTPIKVGKKVAVVGGGNVAMDAARTALRLGAEVHIVYRRSEEELPARVE 323 (464)
T ss_pred CCCCCcCCcCcEEHHHHHHHHHhcccccccccCcccCCCeEEEECCcHHHHHHHHHHHHcCCEEEEEeecCcccCCCCHH
Confidence 66655555567766655432 13578999999999999999999999999999998764 2332222
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEE-EEEe-------eCCCCc-----cceeEEEeccEEEEeeccccCC
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVL-INYS-------NKSTNV-----KTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-v~~~-------~~~g~~-----~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
+ + +.+++.||++++++.+.++..+++ .+. +.+. +.+|.. .++...+++|.||+|+|+.|+.
T Consensus 324 e----~-~~a~~eGV~i~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~d~~Gr~~~~~~~g~~~~i~~D~Vi~AiG~~p~~ 398 (464)
T PRK12831 324 E----V-HHAKEEGVIFDLLTNPVEILGDENGWVKGMKCIKMELGEPDASGRRRPVEIEGSEFVLEVDTVIMSLGTSPNP 398 (464)
T ss_pred H----H-HHHHHcCCEEEecccceEEEecCCCeEEEEEEEEEEecCcCCCCCccceecCCceEEEECCEEEECCCCCCCh
Confidence 2 1 345678999999999999976543 332 2221 112221 1223579999999999999999
Q ss_pred CCCCccc-cCeeecCCCcEEeCCC-CCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 678 NNLNIDK-IGLKVNENNFIIVNDN-CETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 678 ~~l~l~~-~gl~~~~~G~i~Vd~~-l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
.++ .. .|++++++|+|.||++ ++||+|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 399 ~~~--~~~~gl~~~~~G~i~vd~~~~~Ts~pgVfAaGD~~~g~~~v~~Ai~~G~~AA~~I~~ 458 (464)
T PRK12831 399 LIS--STTKGLKINKRGCIVADEETGLTSKEGVFAGGDAVTGAATVILAMGAGKKAAKAIDE 458 (464)
T ss_pred hhh--cccCCceECCCCcEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 763 44 6888888899999998 9999999999999999888999999999999999853
No 72
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=99.98 E-value=1.3e-30 Score=302.08 Aligned_cols=291 Identities=22% Similarity=0.310 Sum_probs=212.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.|||+||||||||++||.+|++.|++|+||++ .+||.|...-.++. +. ++
T Consensus 211 ~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~--------~~GG~~~~~~~~~~----------------~~--~~---- 260 (517)
T PRK15317 211 PYDVLVVGGGPAGAAAAIYAARKGIRTGIVAE--------RFGGQVLDTMGIEN----------------FI--SV---- 260 (517)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEec--------CCCCeeeccCcccc----------------cC--CC----
Confidence 58999999999999999999999999999975 48888742111100 00 00
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
....+.++.. .+...+++++++++.++.+. ++. ....+.+...++..+.||+||+|||+.|+.++
T Consensus 261 ~~~~~~~l~~-----------~l~~~~~~~gv~i~~~~~V~~I~~---~~~~~~V~~~~g~~i~a~~vViAtG~~~r~~~ 326 (517)
T PRK15317 261 PETEGPKLAA-----------ALEEHVKEYDVDIMNLQRASKLEP---AAGLIEVELANGAVLKAKTVILATGARWRNMN 326 (517)
T ss_pred CCCCHHHHHH-----------HHHHHHHHCCCEEEcCCEEEEEEe---cCCeEEEEECCCCEEEcCEEEECCCCCcCCCC
Confidence 0122333222 24556778899998876554 433 22345555556678999999999999887654
Q ss_pred CCc---CCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH-c
Q psy9583 549 GVK---FDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-Q 624 (866)
Q Consensus 549 ~~~---~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~-~ 624 (866)
.++ +....++...........+++++|||||++|+|+|..|+..+.+|+++++.+.+.. ...+.+.+.+ .
T Consensus 327 ipG~~~~~~~~v~~~~~~~~~~~~gk~VvVVGgG~~g~e~A~~L~~~~~~Vtlv~~~~~l~~------~~~l~~~l~~~~ 400 (517)
T PRK15317 327 VPGEDEYRNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVKHVTVLEFAPELKA------DQVLQDKLRSLP 400 (517)
T ss_pred CCCHHHhcCceEEEeeccCchhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEECccccc------cHHHHHHHhcCC
Confidence 332 12222332222222223578999999999999999999999999999999887643 2345566665 6
Q ss_pred CCEEEeCceEEEEEEcCCeEE-EEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENVL-INYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE 702 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~~-v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~ 702 (866)
||++++++.++++..+++.+. +.+.+. ++. ..++++|.+++++|++|+++++ +.. ++++++|+|.||+++|
T Consensus 401 gI~i~~~~~v~~i~~~~g~v~~v~~~~~~~g~----~~~i~~D~v~~~~G~~p~~~~l--~~~-v~~~~~g~i~vd~~l~ 473 (517)
T PRK15317 401 NVTIITNAQTTEVTGDGDKVTGLTYKDRTTGE----EHHLELEGVFVQIGLVPNTEWL--KGT-VELNRRGEIIVDARGA 473 (517)
T ss_pred CcEEEECcEEEEEEcCCCcEEEEEEEECCCCc----EEEEEcCEEEEeECCccCchHH--hhh-eeeCCCCcEEECcCCC
Confidence 999999999999987755443 455432 232 3579999999999999999984 444 7888889999999999
Q ss_pred CCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHHhC
Q psy9583 703 TNIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 703 Ts~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i~g 737 (866)
|++|||||+|||++.+ +.+..|+.+|..||.++..
T Consensus 474 Ts~p~IyAaGDv~~~~~k~~~~A~~eG~~Aa~~~~~ 509 (517)
T PRK15317 474 TSVPGVFAAGDCTTVPYKQIIIAMGEGAKAALSAFD 509 (517)
T ss_pred CCCCCEEECccccCCCCCEEEEhhhhHHHHHHHHHH
Confidence 9999999999999854 6889999999999999864
No 73
>KOG1336|consensus
Probab=99.97 E-value=6.5e-30 Score=272.62 Aligned_cols=365 Identities=20% Similarity=0.250 Sum_probs=262.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCC--eEEEEeccC-CCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGF--KTACIDEWK-DNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~--~V~liek~~-~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
..++|||+|++|..|+.++++.|. +++|+-++. .||.+..+-.... |.
T Consensus 75 r~fvivGgG~~g~vaie~~r~~g~~~ri~l~~~~~~~pydr~~Ls~~~~---~~-------------------------- 125 (478)
T KOG1336|consen 75 RHFVIVGGGPGGAVAIETLRQVGFTERIALVKREYLLPYDRARLSKFLL---TV-------------------------- 125 (478)
T ss_pred ceEEEEcCCchhhhhHhhHHhhCCCcceEEEeccccCcccchhccccee---ec--------------------------
Confidence 679999999999999999999984 577776542 3333333211100 00
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.+.+......++++.+|++++++.+. +|. ...++...+|+.++|++|+||||+.+..
T Consensus 126 -----------------~~~~a~r~~e~Yke~gIe~~~~t~v~~~D~-----~~K~l~~~~Ge~~kys~LilATGs~~~~ 183 (478)
T KOG1336|consen 126 -----------------GEGLAKRTPEFYKEKGIELILGTSVVKADL-----ASKTLVLGNGETLKYSKLIIATGSSAKT 183 (478)
T ss_pred -----------------cccccccChhhHhhcCceEEEcceeEEeec-----cccEEEeCCCceeecceEEEeecCcccc
Confidence 00111112447888999999999887 554 3344444678999999999999998887
Q ss_pred CCCCcCCCceEecchhhhc------cccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHHH
Q psy9583 547 FPGVKFDENLILSNKGALE------MINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAFH 619 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~------~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~~ 619 (866)
+|.++.+...+.+.++..+ ......+++++|+|++|+|+|..|...+.+||++++.+.+++ .+.+.+.+.+++
T Consensus 184 l~~pG~~~~nv~~ireieda~~l~~~~~~~~~vV~vG~G~ig~Evaa~l~~~~~~VT~V~~e~~~~~~lf~~~i~~~~~~ 263 (478)
T KOG1336|consen 184 LDIPGVELKNVFYLREIEDANRLVAAIQLGGKVVCVGGGFIGMEVAAALVSKAKSVTVVFPEPWLLPRLFGPSIGQFYED 263 (478)
T ss_pred CCCCCccccceeeeccHHHHHHHHHHhccCceEEEECchHHHHHHHHHHHhcCceEEEEccCccchhhhhhHHHHHHHHH
Confidence 7666655544443333222 223467899999999999999999999999999999999997 679999999999
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
+++++||++++++.+.+++.+.++-...+...++. ++++|.|++++|.+|+++++ +. +..++.+|+|.||+
T Consensus 264 y~e~kgVk~~~~t~~s~l~~~~~Gev~~V~l~dg~------~l~adlvv~GiG~~p~t~~~--~~-g~~~~~~G~i~V~~ 334 (478)
T KOG1336|consen 264 YYENKGVKFYLGTVVSSLEGNSDGEVSEVKLKDGK------TLEADLVVVGIGIKPNTSFL--EK-GILLDSKGGIKVDE 334 (478)
T ss_pred HHHhcCeEEEEecceeecccCCCCcEEEEEeccCC------EeccCeEEEeeccccccccc--cc-cceecccCCEeehh
Confidence 99999999999999999998776655555556887 99999999999999999995 54 77888899999999
Q ss_pred CCCCCCCCEEEecccCCCC----------CcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE--EccCceeeeecCHHHH
Q psy9583 700 NCETNIPNIYAIGDVVRGP----------MLAHKAEEEGIMVAEHISGQKHSINFNALPFVI--YTFPEIASVGKTEQYL 767 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vGl~e~~a 767 (866)
+|||++|||||+||++..| ..+..|..+|+.|...+....... +..+|++. ++...+-+-|..
T Consensus 335 ~f~t~~~~VyAiGDva~fp~~~~~~~~~v~H~~~A~~~g~~av~ai~~~~~~~-~~~lPyf~t~~f~~~~~~~G~g---- 409 (478)
T KOG1336|consen 335 FFQTSVPNVYAIGDVATFPLKGYGEDRRVEHVDHARASGRQAVKAIKMAPQDA-YDYLPYFYTRFFSLSWRFAGDG---- 409 (478)
T ss_pred ceeeccCCcccccceeecccccccccccchHHHHHHHHHHhhhhhhhccCccc-ccccchHHHHHhhhhccccCcC----
Confidence 9999999999999999754 236678888997666665433222 44566543 111111122211
Q ss_pred HhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHH
Q psy9583 768 KKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDI 838 (866)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l 838 (866)
.+..+.. . ..+...|+.-+++ +..+|+..=+.. .+..+.++-.++.+..+.-+
T Consensus 410 --~~~~v~~-----G-------~~e~~~f~ay~~k---~~~v~a~~~~g~-~~~~~~~a~l~~~~~~v~~~ 462 (478)
T KOG1336|consen 410 --VGDVVLF-----G-------DLEPGSFGAYWIK---GDKVGAVAEGGR-DEEVSQFAKLARQGPEVTSL 462 (478)
T ss_pred --ccceeee-----c-------ccccccceeeEee---ccEEEEEeccCC-ChHHHHHHHHHhcCCcchhh
Confidence 0000000 0 1123346666663 667777765553 58888999999999877653
No 74
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=99.97 E-value=7.6e-30 Score=303.05 Aligned_cols=283 Identities=22% Similarity=0.333 Sum_probs=203.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+||||||||++||..|++.|++|+|||+. +.+||.+.+ .+|...+ +
T Consensus 539 gKkVaIIGgGPAGLsAA~~Lar~G~~VtV~Ek~------~~~GG~lr~--~IP~~Rl-------------------p--- 588 (1019)
T PRK09853 539 RKKVAVIGAGPAGLAAAYFLARAGHPVTVFERE------ENAGGVVKN--IIPQFRI-------------------P--- 588 (1019)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCeEEEEecc------cccCcceee--ecccccc-------------------c---
Confidence 578999999999999999999999999999997 678887643 2332110 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~p 548 (866)
...+.+ ...++++.||++..++.+.++ + ++.....||+||||||+.+. .++
T Consensus 589 -----~evL~~-----------die~l~~~GVe~~~gt~Vdi~----------l--e~L~~~gYDaVILATGA~~~~~l~ 640 (1019)
T PRK09853 589 -----AELIQH-----------DIEFVKAHGVKFEFGCSPDLT----------V--EQLKNEGYDYVVVAIGADKNGGLK 640 (1019)
T ss_pred -----HHHHHH-----------HHHHHHHcCCEEEeCceeEEE----------h--hhheeccCCEEEECcCCCCCCCCC
Confidence 011111 123456679999988765221 1 12244569999999999854 333
Q ss_pred CCcCCCceEecchhhhcc-------ccCCCeEEEECCcHHHHHHHHHHHhc-C-CcEEEEecCC-cCCCcccHHHHHHHH
Q psy9583 549 GVKFDENLILSNKGALEM-------INVPKKLCIIGAGVIGLEIGSIWRRL-G-SEVTILEMSS-NFLNTVDEEIAKKAF 618 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~-------~~~~~~vvVIGgG~~glE~A~~l~~~-g-~~Vtli~~~~-~~l~~~d~~~~~~l~ 618 (866)
..+ ....+++..+++.. ...+++|+|||||++|+|+|..+.+. | .+|++++|++ ..++..+.++.
T Consensus 641 IpG-~~~gV~saldfL~~~k~~~~~~~~GKrVVVIGGGnVAmD~Ar~a~RlgGakeVTLVyRr~~~~MPA~~eEle---- 715 (1019)
T PRK09853 641 LEG-GNQNVIKALPFLEEYKNKGTALKLGKHVVVVGGGNTAMDAARAALRVPGVEKVTVVYRRTKQEMPAWREEYE---- 715 (1019)
T ss_pred CCC-ccCCceehHHHHHHHhhhcccccCCCEEEEECCChHHHHHHHHHHhcCCCceEEEEEccCcccccccHHHHH----
Confidence 222 22345544333321 23579999999999999999998887 4 4899999876 34555554433
Q ss_pred HHHHHcCCEEEeCceEEEEEEcCCeEEEE---Ee--eCCCCc----cceeEEEeccEEEEeeccccCCCCCCccccCeee
Q psy9583 619 HLLNKQGLNIILNTKIHDIKINKENVLIN---YS--NKSTNV----KTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689 (866)
Q Consensus 619 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~---~~--~~~g~~----~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~ 689 (866)
+.+ +.||++++++.+.++..+ +.+.+. +. +.+|.. .++..++++|.||+|+|.+|+.++ ++..|+++
T Consensus 716 ~Al-eeGVe~~~~~~p~~I~~d-G~l~~~~~~lg~~d~~Gr~~~v~tg~~~~I~aD~VIvAIG~~Pntel--le~~GL~l 791 (1019)
T PRK09853 716 EAL-EDGVEFKELLNPESFDAD-GTLTCRVMKLGEPDESGRRRPVETGETVTLEADTVITAIGEQVDTEL--LKANGIPL 791 (1019)
T ss_pred HHH-HcCCEEEeCCceEEEEcC-CcEEEEEEEeecccCCCceEEeeCCCeEEEEeCEEEECCCCcCChhH--HHhcCccc
Confidence 333 469999999999998643 333221 11 111210 122458999999999999999988 57788988
Q ss_pred cCCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC
Q psy9583 690 NENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK 739 (866)
Q Consensus 690 ~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~ 739 (866)
+++|+|.||++++|+.|+|||+|||+.+|.++..|+.+|+.||++|++..
T Consensus 792 d~~G~I~VDetlqTs~pgVFAaGD~a~Gp~tvv~Ai~qGr~AA~nI~~~~ 841 (1019)
T PRK09853 792 DKKGWPVVDANGETSLTNVYMIGDVQRGPSTIVAAIADARRAADAILSRE 841 (1019)
T ss_pred cCCCCEEeCCCcccCCCCEEEEeccccCchHHHHHHHHHHHHHHHHhhhc
Confidence 88899999999999999999999999889999999999999999998743
No 75
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=99.97 E-value=7.5e-30 Score=284.57 Aligned_cols=280 Identities=18% Similarity=0.294 Sum_probs=203.9
Q ss_pred ceeeecCCccHHHHHHHHHHC---CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+|||||||+||+.+|.+|+++ +.+|+|||+++..+ +..+.|. +.. |
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~~~~----------~~~~~~~----------------~~~-g---- 49 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTP----------YSGMLPG----------------MIA-G---- 49 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCCCCc----------ccchhhH----------------HHh-e----
Confidence 489999999999999999754 68999999873100 0001110 000 0
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
..+..++ ...+..++++.+++++.+.+..++. ..+.+. +.+++++.||+||||||+.|..++
T Consensus 50 --~~~~~~~-----------~~~~~~~~~~~gv~~~~~~v~~id~---~~~~V~--~~~g~~~~yD~LviAtG~~~~~~~ 111 (364)
T TIGR03169 50 --HYSLDEI-----------RIDLRRLARQAGARFVIAEATGIDP---DRRKVL--LANRPPLSYDVLSLDVGSTTPLSG 111 (364)
T ss_pred --eCCHHHh-----------cccHHHHHHhcCCEEEEEEEEEEec---ccCEEE--ECCCCcccccEEEEccCCCCCCCC
Confidence 0011111 1113345667899999988777765 334444 456778999999999999998665
Q ss_pred CCcCCCceEe---cchhhhc----c------ccCCCeEEEECCcHHHHHHHHHHHh----cC--CcEEEEecCCcCCCcc
Q psy9583 549 GVKFDENLIL---SNKGALE----M------INVPKKLCIIGAGVIGLEIGSIWRR----LG--SEVTILEMSSNFLNTV 609 (866)
Q Consensus 549 ~~~~~~~~~~---t~~~~~~----~------~~~~~~vvVIGgG~~glE~A~~l~~----~g--~~Vtli~~~~~~l~~~ 609 (866)
.++. ...++ +.+++.. + ...+++++|||+|++|+|+|..|.+ .| .+|+++ +.+.+++.+
T Consensus 112 i~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~E~A~~l~~~~~~~g~~~~V~li-~~~~~l~~~ 189 (364)
T TIGR03169 112 VEGA-ADLAVPVKPIENFLARWEALLESADAPPGTKRLAVVGGGAAGVEIALALRRRLPKRGLRGQVTLI-AGASLLPGF 189 (364)
T ss_pred CCcc-cccccccCCHHHHHHHHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHHHHHHhcCCCceEEEE-eCCcccccC
Confidence 4432 22222 2122111 1 1235799999999999999999975 34 589999 677788888
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeee
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~ 689 (866)
++++...+++.|++.||++++++.+.++..+ .+.+. +|. ++++|.+++|+|.+|+.. +...++++
T Consensus 190 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~----~v~~~--~g~------~i~~D~vi~a~G~~p~~~---l~~~gl~~ 254 (364)
T TIGR03169 190 PAKVRRLVLRLLARRGIEVHEGAPVTRGPDG----ALILA--DGR------TLPADAILWATGARAPPW---LAESGLPL 254 (364)
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeeEEEcCC----eEEeC--CCC------EEecCEEEEccCCChhhH---HHHcCCCc
Confidence 9999999999999999999999999988633 24443 555 899999999999999864 35567888
Q ss_pred cCCCcEEeCCCCCC-CCCCEEEecccCCC-----CCcHHHHHHHHHHHHHHHhC
Q psy9583 690 NENNFIIVNDNCET-NIPNIYAIGDVVRG-----PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 690 ~~~G~i~Vd~~l~T-s~~~VyA~GD~a~~-----~~~~~~A~~~g~~aa~~i~g 737 (866)
+++|+|.||+++|| ++|+|||+|||+.. ++.+..|++||+++|+||..
T Consensus 255 ~~~g~i~vd~~l~~~~~~~Iya~GD~~~~~~~~~~~~~~~A~~~g~~~a~ni~~ 308 (364)
T TIGR03169 255 DEDGFLRVDPTLQSLSHPHVFAAGDCAVITDAPRPKAGVYAVRQAPILAANLRA 308 (364)
T ss_pred CCCCeEEECCccccCCCCCEEEeeeeeecCCCCCCCchHHHHHhHHHHHHHHHH
Confidence 88899999999998 99999999999953 35688899999999999964
No 76
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=99.97 E-value=2e-29 Score=288.54 Aligned_cols=285 Identities=24% Similarity=0.286 Sum_probs=203.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+||||||||+++|..|++.|++|+|||+. +.+||...+ .+|.. .
T Consensus 140 ~~~VvIIGgGpaGl~aA~~l~~~g~~V~lie~~------~~~gG~l~~--gip~~------------------------~ 187 (457)
T PRK11749 140 GKKVAVIGAGPAGLTAAHRLARKGYDVTIFEAR------DKAGGLLRY--GIPEF------------------------R 187 (457)
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC------CCCCcEeec--cCCCc------------------------c
Confidence 478999999999999999999999999999997 567775421 11210 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p 548 (866)
.. ..+. .....++++.|++++.++.+.. .+.+ ++. .+.||+||+|||+. |+.++
T Consensus 188 ~~---~~~~-----------~~~~~~l~~~gv~~~~~~~v~~--------~v~~--~~~-~~~~d~vvlAtGa~~~~~~~ 242 (457)
T PRK11749 188 LP---KDIV-----------DREVERLLKLGVEIRTNTEVGR--------DITL--DEL-RAGYDAVFIGTGAGLPRFLG 242 (457)
T ss_pred CC---HHHH-----------HHHHHHHHHcCCEEEeCCEECC--------ccCH--HHH-HhhCCEEEEccCCCCCCCCC
Confidence 00 0111 1123456678999988876421 1111 112 37799999999986 55444
Q ss_pred CCcCCCceEecchhhhccc---------cCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcC-CCcccHHHHHHH
Q psy9583 549 GVKFDENLILSNKGALEMI---------NVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNF-LNTVDEEIAKKA 617 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~~---------~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~-l~~~d~~~~~~l 617 (866)
.++.+...+++..+++... ..+++++|||||.+|+|+|..+.+.|. +|+++++.+.. ++..+. .
T Consensus 243 i~G~~~~gv~~~~~~l~~~~~~~~~~~~~~g~~VvViGgG~~g~e~A~~l~~~G~~~Vtlv~~~~~~~~~~~~~-----~ 317 (457)
T PRK11749 243 IPGENLGGVYSAVDFLTRVNQAVADYDLPVGKRVVVIGGGNTAMDAARTAKRLGAESVTIVYRRGREEMPASEE-----E 317 (457)
T ss_pred CCCccCCCcEEHHHHHHHHhhccccccCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEeeecCcccCCCCHH-----H
Confidence 4433344455544333221 257999999999999999999999998 89999987653 333322 2
Q ss_pred HHHHHHcCCEEEeCceEEEEEEcCCe---EEEEEee-----CCCC----ccceeEEEeccEEEEeeccccCCCCCCcccc
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKINKEN---VLINYSN-----KSTN----VKTEIITSIFDKLLIAIGRIPNTNNLNIDKI 685 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~~~~~---~~v~~~~-----~~g~----~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~ 685 (866)
.+.+++.||++++++.+.++..++++ +.+.... .+|+ ..++..++++|.|++|+|++|+..++ .+..
T Consensus 318 ~~~~~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~a~G~~p~~~l~-~~~~ 396 (457)
T PRK11749 318 VEHAKEEGVEFEWLAAPVEILGDEGRVTGVEFVRMELGEPDASGRRRVPIEGSEFTLPADLVIKAIGQTPNPLIL-STTP 396 (457)
T ss_pred HHHHHHCCCEEEecCCcEEEEecCCceEEEEEEEEEecCcCCCCCcccCCCCceEEEECCEEEECccCCCCchhh-cccc
Confidence 46678899999999999999876543 3322110 1111 01224579999999999999997763 3456
Q ss_pred CeeecCCCcEEeCC-CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 686 GLKVNENNFIIVND-NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 686 gl~~~~~G~i~Vd~-~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+++++++|+|.||+ +++|++|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 397 gl~~~~~g~i~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~I~~ 449 (457)
T PRK11749 397 GLELNRWGTIIADDETGRTSLPGVFAGGDIVTGAATVVWAVGDGKDAAEAIHE 449 (457)
T ss_pred CccCCCCCCEEeCCCCCccCCCCEEEeCCcCCCchHHHHHHHHHHHHHHHHHH
Confidence 78888899999998 89999999999999998888999999999999999863
No 77
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=99.97 E-value=5.6e-29 Score=275.33 Aligned_cols=297 Identities=22% Similarity=0.250 Sum_probs=203.1
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
...+|+|||+|++|+++|..|++.|++|++||+. +.+||..... .+. .
T Consensus 17 ~~~~VvIIG~G~aGl~aA~~l~~~g~~v~lie~~------~~~gg~~~~~--~~~------------------------~ 64 (352)
T PRK12770 17 TGKKVAIIGAGPAGLAAAGYLACLGYEVHVYDKL------PEPGGLMLFG--IPE------------------------F 64 (352)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCcEEEEeCC------CCCCceeeec--Ccc------------------------c
Confidence 3578999999999999999999999999999997 5666643210 000 0
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccc--cCcccEEEEEc--CCceEEEecEEEEecCCC-
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKI--QNNFHEIQIIN--KTKETITAKYIIIATGSK- 543 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~--~~~~~~v~v~~--~~g~~i~~d~lViATGs~- 543 (866)
..+...+. .... .+.+.+++++.++.+..... ......+.... .++..+.||+||||||+.
T Consensus 65 --~~~~~~~~-----------~~~~-~l~~~~i~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lviAtGs~~ 130 (352)
T PRK12770 65 --RIPIERVR-----------EGVK-ELEEAGVVFHTRTKVCCGEPLHEEEGDEFVERIVSLEELVKKYDAVLIATGTWK 130 (352)
T ss_pred --ccCHHHHH-----------HHHH-HHHhCCeEEecCcEEeeccccccccccccccccCCHHHHHhhCCEEEEEeCCCC
Confidence 00001100 0112 24455899888876653210 00011111111 112247899999999994
Q ss_pred CcCCCCCcCCCceEecchhhhc-----------ccc----CCCeEEEECCcHHHHHHHHHHHhcCCc-EEEEecCCcCCC
Q psy9583 544 ARSFPGVKFDENLILSNKGALE-----------MIN----VPKKLCIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNFLN 607 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~~~~~-----------~~~----~~~~vvVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~l~ 607 (866)
|+.|+.++.+...+++..+... ... .+++++|||+|++|+|+|..|...|.+ |+++++.+....
T Consensus 131 ~~~~~ipg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vvViG~G~~g~e~A~~l~~~g~~~Vtvi~~~~~~~~ 210 (352)
T PRK12770 131 SRKLGIPGEDLPGVYSALEYLFRIRAAKLGYLPWEKVPPVEGKKVVVVGAGLTAVDAALEAVLLGAEKVYLAYRRTINEA 210 (352)
T ss_pred CCcCCCCCccccCceeHHHHHHHhhhccccccccccccccCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeecchhhC
Confidence 6655554444445555432211 111 258999999999999999999999987 999998764322
Q ss_pred cccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCC-------C-----CccceeEEEeccEEEEeecccc
Q psy9583 608 TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKS-------T-----NVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 608 ~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~-------g-----~~~~~~~~~~~D~vi~a~G~~p 675 (866)
.. .....+.|+++||++++++.+.+++..+....+.+.... + ...++...+++|.+++++|++|
T Consensus 211 ~~----~~~~~~~l~~~gi~i~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~vi~a~G~~p 286 (352)
T PRK12770 211 PA----GKYEIERLIARGVEFLELVTPVRIIGEGRVEGVELAKMRLGEPDESGRPRPVPIPGSEFVLEADTVVFAIGEIP 286 (352)
T ss_pred CC----CHHHHHHHHHcCCEEeeccCceeeecCCcEeEEEEEEEEecCcCcccCcCceecCCCeEEEECCEEEECcccCC
Confidence 22 234456689999999999999999865432233332100 0 0011245799999999999999
Q ss_pred CCCCCCccc-cCeeecCCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 676 NTNNLNIDK-IGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 676 ~~~~l~l~~-~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+..+. .. .|++++++|+|.||++++|+.|+|||+|||+..+.++..|+.+|+.||.+|..
T Consensus 287 ~~~l~--~~~~g~~~~~~g~i~vd~~~~t~~~~vyaiGD~~~~~~~~~~A~~~g~~aa~~i~~ 347 (352)
T PRK12770 287 TPPFA--KECLGIELNRKGEIVVDEKHMTSREGVFAAGDVVTGPSKIGKAIKSGLRAAQSIHE 347 (352)
T ss_pred Cchhh--hcccCceecCCCcEeeCCCcccCCCCEEEEcccccCcchHHHHHHHHHHHHHHHHH
Confidence 98763 33 78888888999999999999999999999998889999999999999999864
No 78
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=99.97 E-value=5e-29 Score=297.93 Aligned_cols=282 Identities=23% Similarity=0.343 Sum_probs=201.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.+||+||||||||++||..|++.|++|+|||+. +.+||.+.+. +|... ++
T Consensus 537 ~kkVaIIGGGPAGLSAA~~LAr~G~~VTV~Ek~------~~lGG~l~~~--IP~~r-------------------lp--- 586 (1012)
T TIGR03315 537 AHKVAVIGAGPAGLSAGYFLARAGHPVTVFEKK------EKPGGVVKNI--IPEFR-------------------IS--- 586 (1012)
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEecc------cccCceeeec--ccccC-------------------CC---
Confidence 479999999999999999999999999999997 6788876432 33211 00
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
...+.+ ...++.+.||+++.+.... +.+ ++.....||+||||||+.+..++.
T Consensus 587 -----~e~l~~-----------~ie~l~~~GVe~~~g~~~d----------~~v--e~l~~~gYDaVIIATGA~~~~~l~ 638 (1012)
T TIGR03315 587 -----AESIQK-----------DIELVKFHGVEFKYGCSPD----------LTV--AELKNQGYKYVILAIGAWKHGPLR 638 (1012)
T ss_pred -----HHHHHH-----------HHHHHHhcCcEEEEecccc----------eEh--hhhhcccccEEEECCCCCCCCCCC
Confidence 011111 1234566799998874211 112 122345699999999998543322
Q ss_pred CcCCCceEecchhhhc-------cccCCCeEEEECCcHHHHHHHHHHHhc-CC-cEEEEecCC-cCCCcccHHHHHHHHH
Q psy9583 550 VKFDENLILSNKGALE-------MINVPKKLCIIGAGVIGLEIGSIWRRL-GS-EVTILEMSS-NFLNTVDEEIAKKAFH 619 (866)
Q Consensus 550 ~~~~~~~~~t~~~~~~-------~~~~~~~vvVIGgG~~glE~A~~l~~~-g~-~Vtli~~~~-~~l~~~d~~~~~~l~~ 619 (866)
.......+++..+++. ....+++|+|||||++|+|+|..+.+. |. +|++++|+. ..++..+.++ .+
T Consensus 639 I~G~~~~v~~avefL~~~~~~~~~~~~GK~VVVIGGGnvAmD~Ar~a~Rl~Ga~kVtLVyRr~~~~Mpa~~eEl----~~ 714 (1012)
T TIGR03315 639 LEGGGERVLKSLEFLRAFKEGPTINPLGKHVVVVGGGNTAMDAARAALRVPGVEKVTVVYRRTKRYMPASREEL----EE 714 (1012)
T ss_pred cCCCCcceeeHHHHHHHhhccccccccCCeEEEECCCHHHHHHHHHHHHhCCCceEEEEEccCccccccCHHHH----HH
Confidence 2212234554433332 124589999999999999999998886 75 799999876 3455555443 33
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEe-----eCCCC----ccceeEEEeccEEEEeeccccCCCCCCccccCeeec
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYS-----NKSTN----VKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN 690 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~-----~~~g~----~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~ 690 (866)
.+ +.||+++++..+.++. ++.+.+... ..+|. ..++..++++|.||+|+|++|+.++ ++..|++++
T Consensus 715 al-eeGVe~~~~~~p~~I~--~g~l~v~~~~l~~~d~sGr~~~v~~Gee~~I~aD~VIvAiG~~Pnt~l--le~~GL~ld 789 (1012)
T TIGR03315 715 AL-EDGVDFKELLSPESFE--DGTLTCEVMKLGEPDASGRRRPVGTGETVDLPADTVIAAVGEQVDTDL--LQKNGIPLD 789 (1012)
T ss_pred HH-HcCCEEEeCCceEEEE--CCeEEEEEEEeecccCCCceeeecCCCeEEEEeCEEEEecCCcCChHH--HHhcCcccC
Confidence 33 4699999999998887 334433211 01111 0123457999999999999999988 577889998
Q ss_pred CCCcEEeCCC-CCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC
Q psy9583 691 ENNFIIVNDN-CETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 691 ~~G~i~Vd~~-l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
.+|+|.||++ ++|+.|+|||+|||+.+|.++..|+.+|+.||.+|++.
T Consensus 790 ~~G~I~VD~~~~~Ts~pgVFAaGD~a~GP~tVv~AIaqGr~AA~nIl~~ 838 (1012)
T TIGR03315 790 EYGWPVVNQATGETNITNVFVIGDANRGPATIVEAIADGRKAANAILSR 838 (1012)
T ss_pred CCCCEEeCCCCCccCCCCEEEEeCcCCCccHHHHHHHHHHHHHHHHhcc
Confidence 8999999986 89999999999999988999999999999999999864
No 79
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=99.97 E-value=7.1e-29 Score=299.75 Aligned_cols=286 Identities=25% Similarity=0.341 Sum_probs=206.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
..+||+||||||||++||..|++.|++|+|||+. +.+||...+ .+|..
T Consensus 430 ~~~~V~IIGaGpAGl~aA~~l~~~G~~V~v~e~~------~~~GG~l~~--gip~~------------------------ 477 (752)
T PRK12778 430 NGKKVAVIGSGPAGLSFAGDLAKRGYDVTVFEAL------HEIGGVLKY--GIPEF------------------------ 477 (752)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEecC------CCCCCeeee--cCCCC------------------------
Confidence 3579999999999999999999999999999997 567886432 12211
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCC-CCcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGS-KARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs-~p~~~ 547 (866)
.. + ..+..+ ....+++.||+++.++.+. ..+.+ ++.....||+||||||+ .|+.+
T Consensus 478 rl--p-~~~~~~-----------~~~~l~~~gv~~~~~~~v~--------~~v~~--~~l~~~~ydavvlAtGa~~~~~l 533 (752)
T PRK12778 478 RL--P-KKIVDV-----------EIENLKKLGVKFETDVIVG--------KTITI--EELEEEGFKGIFIASGAGLPNFM 533 (752)
T ss_pred CC--C-HHHHHH-----------HHHHHHHCCCEEECCCEEC--------CcCCH--HHHhhcCCCEEEEeCCCCCCCCC
Confidence 00 0 011111 1234667899998876542 12222 22234679999999998 47766
Q ss_pred CCCcCCCceEecchhhhcc--------------ccCCCeEEEECCcHHHHHHHHHHHhcCCc-EEEEecCCcC-CCcccH
Q psy9583 548 PGVKFDENLILSNKGALEM--------------INVPKKLCIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNF-LNTVDE 611 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~--------------~~~~~~vvVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~-l~~~d~ 611 (866)
+.++.+...+++..+++.. ...+++|+|||||++|+|+|..+.++|.+ |+++++++.. ++....
T Consensus 534 ~ipG~~~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtlv~r~~~~~~~~~~~ 613 (752)
T PRK12778 534 NIPGENSNGVMSSNEYLTRVNLMDAASPDSDTPIKFGKKVAVVGGGNTAMDSARTAKRLGAERVTIVYRRSEEEMPARLE 613 (752)
T ss_pred CCCCCCCCCcEEHHHHHHHHhhcccccccccCcccCCCcEEEECCcHHHHHHHHHHHHcCCCeEEEeeecCcccCCCCHH
Confidence 5555445566666654432 12468999999999999999999999997 9999987642 333222
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEE-EEEe-------eCCCC-----ccceeEEEeccEEEEeeccccCC
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVL-INYS-------NKSTN-----VKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-v~~~-------~~~g~-----~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
++ +.+++.||++++++.+.++..+++ .+. +.+. +.+|+ ..++...+++|.||+|+|++|+.
T Consensus 614 e~-----~~~~~~GV~i~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~G~~~~~~~~g~~~~i~~D~Vi~A~G~~p~~ 688 (752)
T PRK12778 614 EV-----KHAKEEGIEFLTLHNPIEYLADEKGWVKQVVLQKMELGEPDASGRRRPVAIPGSTFTVDVDLVIVSVGVSPNP 688 (752)
T ss_pred HH-----HHHHHcCCEEEecCcceEEEECCCCEEEEEEEEEEEecCcCCCCCCCceecCCCeEEEECCEEEECcCCCCCc
Confidence 22 346788999999999999876543 221 2321 01222 11234579999999999999998
Q ss_pred CCCCccc-cCeeecCCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 678 NNLNIDK-IGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 678 ~~l~l~~-~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
.++ +. .+++++++|+|.||++++|+.|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 689 ~l~--~~~~gl~~~~~G~i~vd~~~~Ts~~gVfA~GD~~~g~~~vv~Av~~G~~AA~~I~~ 747 (752)
T PRK12778 689 LVP--SSIPGLELNRKGTIVVDEEMQSSIPGIYAGGDIVRGGATVILAMGDGKRAAAAIDE 747 (752)
T ss_pred ccc--ccccCceECCCCCEEeCCCCCCCCCCEEEeCCccCCcHHHHHHHHHHHHHHHHHHH
Confidence 763 33 47889888999999999999999999999998888999999999999999864
No 80
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=99.97 E-value=1.1e-28 Score=299.10 Aligned_cols=286 Identities=23% Similarity=0.283 Sum_probs=206.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+|||||||||+||..|++.|++|+|||+. +.+||...+ ++|...+
T Consensus 306 gkkVaVIGsGPAGLsaA~~Lar~G~~VtVfE~~------~~~GG~l~y--GIP~~rl----------------------- 354 (944)
T PRK12779 306 KPPIAVVGSGPSGLINAYLLAVEGFPVTVFEAF------HDLGGVLRY--GIPEFRL----------------------- 354 (944)
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEeeC------CCCCceEEc--cCCCCcC-----------------------
Confidence 589999999999999999999999999999997 678886421 1332110
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p 548 (866)
. ..++.+ ....+++.||++..+..+. ..+.+ ++.....||+|+||||+. |+.++
T Consensus 355 -p---~~vi~~-----------~i~~l~~~Gv~f~~n~~vG--------~dit~--~~l~~~~yDAV~LAtGA~~pr~l~ 409 (944)
T PRK12779 355 -P---NQLIDD-----------VVEKIKLLGGRFVKNFVVG--------KTATL--EDLKAAGFWKIFVGTGAGLPTFMN 409 (944)
T ss_pred -h---HHHHHH-----------HHHHHHhhcCeEEEeEEec--------cEEeH--HHhccccCCEEEEeCCCCCCCcCC
Confidence 0 111111 1234666799998887543 12222 333446799999999995 77665
Q ss_pred CCcCCCceEecchhhhcc----------------ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-CCCcccH
Q psy9583 549 GVKFDENLILSNKGALEM----------------INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-FLNTVDE 611 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~----------------~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-~l~~~d~ 611 (866)
.++.+...+++..+++.. ...+++|+|||||.+|+|+|..+.++|++|+++++++. .++....
T Consensus 410 IpG~dl~GV~~a~dfL~~~~~~~~~~~~~~~~~~~~~Gk~VvVIGGG~tA~D~A~ta~R~Ga~Vtlv~rr~~~~mpa~~~ 489 (944)
T PRK12779 410 VPGEHLLGVMSANEFLTRVNLMRGLDDDYETPLPEVKGKEVFVIGGGNTAMDAARTAKRLGGNVTIVYRRTKSEMPARVE 489 (944)
T ss_pred CCCCcCcCcEEHHHHHHHHHhhccccccccccccccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEecCcccccccHH
Confidence 555455566666555431 11468999999999999999999999999999998764 2333222
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC--eEE-EEEe-------eCCCCc----cceeEEEeccEEEEeeccccCC
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE--NVL-INYS-------NKSTNV----KTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~~~-v~~~-------~~~g~~----~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
+ +.. ..+.||+++++..++++..+++ .+. +.+. +.+|+. .++...+++|.||+|+|+.|+.
T Consensus 490 e----~~~-a~eeGV~~~~~~~p~~i~~d~~~~~V~~v~~~~~~l~~~d~~Gr~~~~~~G~e~~i~aD~VI~AiG~~p~~ 564 (944)
T PRK12779 490 E----LHH-ALEEGINLAVLRAPREFIGDDHTHFVTHALLDVNELGEPDKSGRRSPKPTGEIERVPVDLVIMALGNTANP 564 (944)
T ss_pred H----HHH-HHHCCCEEEeCcceEEEEecCCCCEEEEEEEEEEEeccccCcCceeeecCCceEEEECCEEEEcCCcCCCh
Confidence 2 222 3467999999999999986532 221 1111 012210 1234579999999999999997
Q ss_pred CCCCccccCeeecCCCcEEeCC-CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 678 NNLNIDKIGLKVNENNFIIVND-NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 678 ~~l~l~~~gl~~~~~G~i~Vd~-~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
.+. ....+++++++|.|.||+ +++||+|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 565 ~l~-~~~~gle~~~~G~I~vd~~~~~Ts~pgVFAaGD~~~G~~~vv~Ai~eGr~AA~~I~~ 624 (944)
T PRK12779 565 IMK-DAEPGLKTNKWGTIEVEKGSQRTSIKGVYSGGDAARGGSTAIRAAGDGQAAAKEIVG 624 (944)
T ss_pred hhh-hcccCceECCCCCEEECCCCCccCCCCEEEEEcCCCChHHHHHHHHHHHHHHHHHHH
Confidence 542 344688998899999997 58999999999999999888999999999999999963
No 81
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=99.96 E-value=3.1e-28 Score=279.06 Aligned_cols=290 Identities=20% Similarity=0.251 Sum_probs=201.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+|||||+||++||..|++.|++|+|||+. +.+||...+ ++|...
T Consensus 143 ~~~VvIIGaGpAGl~aA~~l~~~G~~V~vie~~------~~~GG~l~~--gip~~~------------------------ 190 (471)
T PRK12810 143 GKKVAVVGSGPAGLAAADQLARAGHKVTVFERA------DRIGGLLRY--GIPDFK------------------------ 190 (471)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCcEEEEecC------CCCCceeee--cCCccc------------------------
Confidence 479999999999999999999999999999997 567775421 122110
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p 548 (866)
.. ..+.. ....++.+.|++++.++.+..+. .+ +.....||+||+|||+. |..++
T Consensus 191 --~~-~~~~~-----------~~~~~~~~~gv~~~~~~~v~~~~--------~~---~~~~~~~d~vvlAtGa~~~~~l~ 245 (471)
T PRK12810 191 --LE-KEVID-----------RRIELMEAEGIEFRTNVEVGKDI--------TA---EELLAEYDAVFLGTGAYKPRDLG 245 (471)
T ss_pred --CC-HHHHH-----------HHHHHHHhCCcEEEeCCEECCcC--------CH---HHHHhhCCEEEEecCCCCCCcCC
Confidence 00 00111 11234667899998887654211 00 11235799999999997 55544
Q ss_pred CCcCCCceEecchhhhc--------------cccCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcCCCcc-cH-
Q psy9583 549 GVKFDENLILSNKGALE--------------MINVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNFLNTV-DE- 611 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~--------------~~~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~l~~~-d~- 611 (866)
.++.+...+++..+++. ....+++|+|||+|++|+|+|..+.+.|. +|+++++.+...... +.
T Consensus 246 ipG~~~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~g~e~A~~~~~~ga~~Vt~~~~~~~~~~~~~~~~ 325 (471)
T PRK12810 246 IPGRDLDGVHFAMDFLIQNTRRVLGDETEPFISAKGKHVVVIGGGDTGMDCVGTAIRQGAKSVTQRDIMPMPPSRRNKNN 325 (471)
T ss_pred CCCccCCCcEEHHHHHHHHHhhhccccccccccCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEccccCCCcccccccc
Confidence 44433344444322211 12357899999999999999999888886 688665544322111 00
Q ss_pred ---HH-HHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEe---eCCCC---ccceeEEEeccEEEEeeccccCCCCC
Q psy9583 612 ---EI-AKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYS---NKSTN---VKTEIITSIFDKLLIAIGRIPNTNNL 680 (866)
Q Consensus 612 ---~~-~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~---~~~g~---~~~~~~~~~~D~vi~a~G~~p~~~~l 680 (866)
.. .....+.+++.||++++++.++++..+++.+. +.+. ..+|. ..++..++++|.||+|+|++|+...+
T Consensus 326 ~~~~~~~~~~~~~~~~~GV~i~~~~~~~~i~~~~g~v~~V~~~~~~~~~g~~~~~~g~~~~i~~D~VI~A~G~~p~~~~l 405 (471)
T PRK12810 326 PWPYWPMKLEVSNAHEEGVEREFNVQTKEFEGENGKVTGVKVVRTELGEGDFEPVEGSEFVLPADLVLLAMGFTGPEAGL 405 (471)
T ss_pred CCcccchHHHHHHHHHcCCeEEeccCceEEEccCCEEEEEEEEEEEecCCCccccCCceEEEECCEEEECcCcCCCchhh
Confidence 00 11134567788999999999999986554442 3322 11220 11234689999999999999986533
Q ss_pred CccccCeeecCCCcEEeC-CCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 681 NIDKIGLKVNENNFIIVN-DNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 681 ~l~~~gl~~~~~G~i~Vd-~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
++..+++++++|++++| ++++|+.|+|||+|||++++.++..|+.+|+.||.+|..
T Consensus 406 -~~~~gl~~~~~g~i~vd~~~~~Ts~~gVfa~GD~~~g~~~~~~Av~~G~~AA~~i~~ 462 (471)
T PRK12810 406 -LAQFGVELDERGRVAAPDNAYQTSNPKVFAAGDMRRGQSLVVWAIAEGRQAARAIDA 462 (471)
T ss_pred -ccccCcccCCCCCEEeCCCcccCCCCCEEEccccCCCchhHHHHHHHHHHHHHHHHH
Confidence 57788999889999998 799999999999999998888899999999999999864
No 82
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=99.96 E-value=8.9e-28 Score=284.28 Aligned_cols=283 Identities=20% Similarity=0.252 Sum_probs=202.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+||||||||++||..|++.|++|+|||+. +.+||.+.+ .+|...
T Consensus 193 ~k~VaIIGaGpAGl~aA~~La~~G~~Vtv~e~~------~~~GG~l~~--gip~~~------------------------ 240 (652)
T PRK12814 193 GKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDAN------EQAGGMMRY--GIPRFR------------------------ 240 (652)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCcEEEEecC------CCCCceeee--cCCCCC------------------------
Confidence 478999999999999999999999999999997 677886522 122110
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~p 548 (866)
. ...+..+ ....+.+.|+++..++.+..+ +.+ ++ ....||+||||||+.+. .++
T Consensus 241 ~---~~~~~~~-----------~~~~l~~~Gv~i~~~~~v~~d--------v~~--~~-~~~~~DaVilAtGa~~~~~~~ 295 (652)
T PRK12814 241 L---PESVIDA-----------DIAPLRAMGAEFRFNTVFGRD--------ITL--EE-LQKEFDAVLLAVGAQKASKMG 295 (652)
T ss_pred C---CHHHHHH-----------HHHHHHHcCCEEEeCCcccCc--------cCH--HH-HHhhcCEEEEEcCCCCCCCCC
Confidence 0 0011111 123356679998877653221 111 11 12359999999999854 343
Q ss_pred CCcCCCceEecchhhhc------cccCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCc-CCCcccHHHHHHHHHH
Q psy9583 549 GVKFDENLILSNKGALE------MINVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSN-FLNTVDEEIAKKAFHL 620 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~------~~~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~-~l~~~d~~~~~~l~~~ 620 (866)
.++.+...+++..+++. ....+++|+|||||++|+|+|..+.++|. +|++++++++ .++..+.++ .+.
T Consensus 296 ipG~~~~gv~~~~~~l~~~~~~~~~~~gk~VvVIGgG~~a~e~A~~l~~~Ga~~Vtlv~r~~~~~mpa~~~ei----~~a 371 (652)
T PRK12814 296 IPGEELPGVISGIDFLRNVALGTALHPGKKVVVIGGGNTAIDAARTALRLGAESVTILYRRTREEMPANRAEI----EEA 371 (652)
T ss_pred CCCcCcCCcEeHHHHHHHhhcCCcccCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEeeecCcccCCCCHHHH----HHH
Confidence 33334444555444432 12457999999999999999999999986 5999998875 455544443 222
Q ss_pred HHHcCCEEEeCceEEEEEEcCCeEEEE---Eee----CCCCc-----cceeEEEeccEEEEeeccccCCCCCCccccCee
Q psy9583 621 LNKQGLNIILNTKIHDIKINKENVLIN---YSN----KSTNV-----KTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLK 688 (866)
Q Consensus 621 l~~~GV~i~~~~~v~~i~~~~~~~~v~---~~~----~~g~~-----~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~ 688 (866)
.+.||+|++++.+.++..+++.+.+. +.. .+|.. .++...+++|.||+|+|+.|+.++ ++..|++
T Consensus 372 -~~eGV~i~~~~~~~~i~~~~~~~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~~D~VI~AiG~~p~~~l--l~~~gl~ 448 (652)
T PRK12814 372 -LAEGVSLRELAAPVSIERSEGGLELTAIKMQQGEPDESGRRRPVPVEGSEFTLQADTVISAIGQQVDPPI--AEAAGIG 448 (652)
T ss_pred -HHcCCcEEeccCcEEEEecCCeEEEEEEEEEecccCCCCCCcceecCCceEEEECCEEEECCCCcCCccc--ccccCcc
Confidence 35699999999999998766554332 221 12211 123457999999999999999987 5677888
Q ss_pred ecCCCcEEeCC-CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHh
Q psy9583 689 VNENNFIIVND-NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 689 ~~~~G~i~Vd~-~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 736 (866)
++.+|+|.||+ +++|+.|+|||+|||+.++.++..|+.+|+.||.+|.
T Consensus 449 ~~~~G~I~vd~~~~~Ts~pgVfA~GDv~~g~~~v~~Ai~~G~~AA~~I~ 497 (652)
T PRK12814 449 TSRNGTVKVDPETLQTSVAGVFAGGDCVTGADIAINAVEQGKRAAHAID 497 (652)
T ss_pred ccCCCcEeeCCCCCcCCCCCEEEcCCcCCCchHHHHHHHHHHHHHHHHH
Confidence 88889999997 6899999999999999888899999999999999985
No 83
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=99.96 E-value=4e-27 Score=268.80 Aligned_cols=285 Identities=22% Similarity=0.248 Sum_probs=201.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+|||+||+|++||..|++.|++|+++|+. +.+||...+ ++|...+
T Consensus 141 ~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~------~~~gG~l~~--gip~~~~----------------------- 189 (467)
T TIGR01318 141 GKRVAVIGAGPAGLACADILARAGVQVVVFDRH------PEIGGLLTF--GIPSFKL----------------------- 189 (467)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEecC------CCCCceeee--cCccccC-----------------------
Confidence 478999999999999999999999999999997 678885422 2332110
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~p 548 (866)
+ ..+.. ....++++.|++++.++.+..+ +.+ + +....||+||+|||+.+. .++
T Consensus 190 ---~-~~~~~-----------~~~~~~~~~Gv~~~~~~~v~~~--------~~~--~-~~~~~~D~vilAtGa~~~~~~~ 243 (467)
T TIGR01318 190 ---D-KAVLS-----------RRREIFTAMGIEFHLNCEVGRD--------ISL--D-DLLEDYDAVFLGVGTYRSMRGG 243 (467)
T ss_pred ---C-HHHHH-----------HHHHHHHHCCCEEECCCEeCCc--------cCH--H-HHHhcCCEEEEEeCCCCCCcCC
Confidence 0 01111 1234567789999887654211 111 1 123469999999999864 333
Q ss_pred CCcCCCceEecchhhh--------cc---------ccCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcC-CCcc
Q psy9583 549 GVKFDENLILSNKGAL--------EM---------INVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNF-LNTV 609 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~--------~~---------~~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~-l~~~ 609 (866)
..+.+...+++..++. .. ...+++++|||+|++|+|+|..+.++|. +||+++|++.. ++..
T Consensus 244 i~g~~~~gV~~a~~~l~~~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~a~~~Ga~~Vtvv~r~~~~~~~~~ 323 (467)
T TIGR01318 244 LPGEDAPGVLQALPFLIANTRQLMGLPESPEEPLIDVEGKRVVVLGGGDTAMDCVRTAIRLGAASVTCAYRRDEANMPGS 323 (467)
T ss_pred CCCcCCCCcEEHHHHHHHHHHHhcCCCccccccccccCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEEecCcccCCCC
Confidence 3333333444322111 01 1246899999999999999999999995 79999987764 4444
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC-CeEE-EEEee-------CCCCc-----cceeEEEeccEEEEeecccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINK-ENVL-INYSN-------KSTNV-----KTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~-v~~~~-------~~g~~-----~~~~~~~~~D~vi~a~G~~p 675 (866)
+.++ +.+++.||++++++.+.++..++ +.+. +.+.. .+|.. .++...+++|.||+|+|++|
T Consensus 324 ~~e~-----~~~~~~GV~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~g~~~~i~~D~Vi~a~G~~p 398 (467)
T TIGR01318 324 RREV-----ANAREEGVEFLFNVQPVYIECDEDGRVTGVGLVRTALGEPDADGRRRPVPVAGSEFVLPADVVIMAFGFQP 398 (467)
T ss_pred HHHH-----HHHHhcCCEEEecCCcEEEEECCCCeEEEEEEEEEEecccCCCCCccceecCCceEEEECCEEEECCcCCC
Confidence 4332 44677899999999999997653 3331 22210 12211 12345799999999999999
Q ss_pred CCCCCCccccCeeecCCCcEEeC----CCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 676 NTNNLNIDKIGLKVNENNFIIVN----DNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 676 ~~~~l~l~~~gl~~~~~G~i~Vd----~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+...+ ++..+++++++|+|.|| ++++|+.|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 399 ~~~~~-~~~~gl~~~~~g~i~vd~~~~~~~~T~~~gVfa~GD~~~~~~~~~~Ai~~G~~aA~~i~~ 463 (467)
T TIGR01318 399 HAMPW-LAGHGITLDSWGRIITGDVSYLPYQTTNPKIFAGGDAVRGADLVVTAVAEGRQAAQGILD 463 (467)
T ss_pred Ccccc-ccccCccCCCCCCEEeCCccccCccCCCCCEEEECCcCCCccHHHHHHHHHHHHHHHHHH
Confidence 86432 56778899888999999 689999999999999998888899999999999999863
No 84
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=99.95 E-value=1e-26 Score=276.80 Aligned_cols=285 Identities=21% Similarity=0.257 Sum_probs=200.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+||||||||++||..|++.|++|+|||+. +.+||...+ ++|...+
T Consensus 327 ~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~------~~~GG~l~~--gip~~~l----------------------- 375 (654)
T PRK12769 327 DKRVAIIGAGPAGLACADVLARNGVAVTVYDRH------PEIGGLLTF--GIPAFKL----------------------- 375 (654)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEecC------CCCCceeee--cCCCccC-----------------------
Confidence 479999999999999999999999999999997 678886432 2332110
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~p 548 (866)
+ ..++.+ ...++++.|+++..++.+..+ +.+. .....||+|++|||+... .++
T Consensus 376 ---~-~~~~~~-----------~~~~~~~~Gv~~~~~~~v~~~--------i~~~---~~~~~~DavilAtGa~~~~~l~ 429 (654)
T PRK12769 376 ---D-KSLLAR-----------RREIFSAMGIEFELNCEVGKD--------ISLE---SLLEDYDAVFVGVGTYRSMKAG 429 (654)
T ss_pred ---C-HHHHHH-----------HHHHHHHCCeEEECCCEeCCc--------CCHH---HHHhcCCEEEEeCCCCCCCCCC
Confidence 0 011111 123466789998887754321 1110 112469999999998643 333
Q ss_pred CCcCCCceEecchh--------hhcc---------ccCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcC-CCcc
Q psy9583 549 GVKFDENLILSNKG--------ALEM---------INVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNF-LNTV 609 (866)
Q Consensus 549 ~~~~~~~~~~t~~~--------~~~~---------~~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~-l~~~ 609 (866)
..+.+...+++..+ .... ...+++|+|||||.+|+|+|..+.++|. +|+++++++.. ++..
T Consensus 430 i~g~~~~Gv~~a~~~l~~~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~a~r~ga~~Vt~i~~~~~~~~~~~ 509 (654)
T PRK12769 430 LPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGS 509 (654)
T ss_pred CCCCCCCCeEEhHHHHHHHHhhhccCccccccccccCCCCeEEEECCcHHHHHHHHHHHHcCCCeEEEeEecCCCCCCCC
Confidence 32222333332211 1111 1246899999999999999999999986 69999987664 4444
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC-CeE-EEEEe-------eCCCCc-----cceeEEEeccEEEEeecccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINK-ENV-LINYS-------NKSTNV-----KTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~-~v~~~-------~~~g~~-----~~~~~~~~~D~vi~a~G~~p 675 (866)
+.+ .+.+++.||++++++.++++..++ +.+ .+.+. +.+|+. .++...+++|.||+|+|+.|
T Consensus 510 ~~e-----~~~~~~~Gv~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~G~~~~~~~~g~~~~i~~D~Vi~AiG~~p 584 (654)
T PRK12769 510 KKE-----VKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPIPGSEFVMPADAVIMAFGFNP 584 (654)
T ss_pred HHH-----HHHHHHcCCeEEeccCcEEEEECCCCeEEEEEEEEEEecCcCCCCCCcceeCCCceEEEECCEEEECccCCC
Confidence 333 345778899999999999997543 333 22221 112321 22345799999999999999
Q ss_pred CCCCCCccccCeeecCCCcEEeCC----CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 676 NTNNLNIDKIGLKVNENNFIIVND----NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 676 ~~~~l~l~~~gl~~~~~G~i~Vd~----~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+...+ ++..+++++.+|.|.||+ +++|++|+|||+||++.++.++..|+.+|+.||.+|..
T Consensus 585 ~~~~~-~~~~gl~~~~~G~i~vd~~~~~~~~Ts~~gVfAaGD~~~g~~~vv~Ai~~Gr~AA~~I~~ 649 (654)
T PRK12769 585 HGMPW-LESHGVTVDKWGRIIADVESQYRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIID 649 (654)
T ss_pred Ccccc-ccccCCcCCCCCCEEeCCCcccCcccCCCCEEEcCCcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 86433 577889999899999996 58999999999999999888999999999999999964
No 85
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Probab=99.95 E-value=6.3e-27 Score=286.50 Aligned_cols=286 Identities=20% Similarity=0.252 Sum_probs=201.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+|||||||||+||..|++.|++|+|||+. +.+||...+ .+|.. .
T Consensus 430 ~~kVaIIG~GPAGLsaA~~La~~G~~VtV~E~~------~~~GG~l~~--gip~~------------------------r 477 (1006)
T PRK12775 430 LGKVAICGSGPAGLAAAADLVKYGVDVTVYEAL------HVVGGVLQY--GIPSF------------------------R 477 (1006)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEecC------CCCcceeec--cCCcc------------------------C
Confidence 579999999999999999999999999999997 567775321 12211 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p 548 (866)
.. ..++.+ ....+++.||++..+..+.. .+.+..-. ....||+||||||+. |+.++
T Consensus 478 l~---~e~~~~-----------~~~~l~~~Gv~~~~~~~vg~--------~~~~~~l~-~~~~yDaViIATGa~~pr~l~ 534 (1006)
T PRK12775 478 LP---RDIIDR-----------EVQRLVDIGVKIETNKVIGK--------TFTVPQLM-NDKGFDAVFLGVGAGAPTFLG 534 (1006)
T ss_pred CC---HHHHHH-----------HHHHHHHCCCEEEeCCccCC--------ccCHHHHh-hccCCCEEEEecCCCCCCCCC
Confidence 00 111111 23346678999988864321 12221100 124699999999995 77665
Q ss_pred CCcCCCceEecchhhhcc---------------ccCCCeEEEECCcHHHHHHHHHHHhcCCc-EEEEecCCcCC-CcccH
Q psy9583 549 GVKFDENLILSNKGALEM---------------INVPKKLCIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNFL-NTVDE 611 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~---------------~~~~~~vvVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~l-~~~d~ 611 (866)
.++.+...+++..+++.. ...+++|+|||||++|+|+|..+.++|.+ |++++++.... +....
T Consensus 535 IpG~~l~gV~~a~~fL~~~~~~~~~~~~~~~~~~~~Gk~VvVIGgG~tA~D~A~~a~rlGa~~Vtiv~rr~~~em~a~~~ 614 (1006)
T PRK12775 535 IPGEFAGQVYSANEFLTRVNLMGGDKFPFLDTPISLGKSVVVIGAGNTAMDCLRVAKRLGAPTVRCVYRRSEAEAPARIE 614 (1006)
T ss_pred CCCcCCCCcEEHHHHHHHHHhcCccccccccCCccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeecCcccCCCCHH
Confidence 555444556666544322 12579999999999999999999999985 88888765432 22211
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcC-CeEE-EEEe-------eCCCC----ccceeEEEeccEEEEeeccccCCC
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINK-ENVL-INYS-------NKSTN----VKTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~-v~~~-------~~~g~----~~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
+ .+.+++.||++++++.+.++..++ +.+. +.+. +.+|+ ..++..++++|.||+|+|+.|+..
T Consensus 615 e-----~~~a~eeGI~~~~~~~p~~i~~~~~G~v~~v~~~~~~l~~~d~~Gr~~~~~~g~~~~i~~D~Vi~AiG~~p~~~ 689 (1006)
T PRK12775 615 E-----IRHAKEEGIDFFFLHSPVEIYVDAEGSVRGMKVEEMELGEPDEKGRRKPMPTGEFKDLECDTVIYALGTKANPI 689 (1006)
T ss_pred H-----HHHHHhCCCEEEecCCcEEEEeCCCCeEEEEEEEEEEecccCCCCCccccCCCceEEEEcCEEEECCCcCCChh
Confidence 1 245677899999999999997643 3322 2221 11221 012245799999999999999987
Q ss_pred CCCccccCeeecCCCcEEeCC-----CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHh
Q psy9583 679 NLNIDKIGLKVNENNFIIVND-----NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 679 ~l~l~~~gl~~~~~G~i~Vd~-----~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 736 (866)
++ ....++.++.+|.|.+|+ +++||+|+|||+|||+.++.++..|+.+|+.||.+|.
T Consensus 690 ~~-~~~~gl~l~~~G~I~vd~~~v~~~~~Ts~pgVFAaGDv~~G~~~vv~Ai~~Gr~AA~~I~ 751 (1006)
T PRK12775 690 IT-QSTPGLALNKWGNIAADDGKLESTQSTNLPGVFAGGDIVTGGATVILAMGAGRRAARSIA 751 (1006)
T ss_pred hh-hccCCcccCCCCcEEeCCCccccCcCCCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHH
Confidence 63 223478888889999996 7899999999999999999999999999999999985
No 86
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Probab=99.95 E-value=2.8e-26 Score=262.79 Aligned_cols=289 Identities=21% Similarity=0.245 Sum_probs=197.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.++|+|||+|++|++||..|++.|++|+|||+. +.+||.+.+ .+|...
T Consensus 143 ~~~V~IIGaG~aGl~aA~~L~~~g~~V~v~e~~------~~~gG~l~~--gip~~~------------------------ 190 (485)
T TIGR01317 143 GKKVAVVGSGPAGLAAADQLNRAGHTVTVFERE------DRCGGLLMY--GIPNMK------------------------ 190 (485)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCeEEEEecC------CCCCceeec--cCCCcc------------------------
Confidence 378999999999999999999999999999997 567775532 122110
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p 548 (866)
.+ ..+..+ ...++++.|++++.++.+..+. . .+.....||+|++|||+. |..++
T Consensus 191 --~~-~~~~~~-----------~~~~~~~~Gv~~~~~~~v~~~~----------~-~~~~~~~~d~VilAtGa~~~~~l~ 245 (485)
T TIGR01317 191 --LD-KAIVDR-----------RIDLLSAEGIDFVTNTEIGVDI----------S-ADELKEQFDAVVLAGGATKPRDLP 245 (485)
T ss_pred --CC-HHHHHH-----------HHHHHHhCCCEEECCCEeCCcc----------C-HHHHHhhCCEEEEccCCCCCCcCC
Confidence 00 001111 1245677899999887664211 0 011235799999999998 67665
Q ss_pred CCcCCCceEecchhhh----------------ccccCCCeEEEECCcHHHHHHHHHHHhcC-CcEEEEecCCcCCCccc-
Q psy9583 549 GVKFDENLILSNKGAL----------------EMINVPKKLCIIGAGVIGLEIGSIWRRLG-SEVTILEMSSNFLNTVD- 610 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~----------------~~~~~~~~vvVIGgG~~glE~A~~l~~~g-~~Vtli~~~~~~l~~~d- 610 (866)
.++.+...+++..+++ .....+++|+|||||++|+|+|..+.++| .+|+++++.+..+....
T Consensus 246 i~G~~~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~~~gk~VvViGgG~~g~d~a~~a~~~ga~~V~vv~~~~~~~~~~~~ 325 (485)
T TIGR01317 246 IPGRELKGIHYAMEFLPSATKALLGKDFKDIIFIKAKGKKVVVIGGGDTGADCVGTSLRHGAASVHQFEIMPKPPEARAK 325 (485)
T ss_pred CCCcCCCCcEeHHHHHHHHhhhhccccccccccccCCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEEecCCChhhccc
Confidence 5544444444432211 01134789999999999999988777776 47999998776543211
Q ss_pred --------H--HHHHHHHHHHHHcCCEE-EeCceEEEEEEcC-CeEE-EEE-----e-eCCCC-----ccceeEEEeccE
Q psy9583 611 --------E--EIAKKAFHLLNKQGLNI-ILNTKIHDIKINK-ENVL-INY-----S-NKSTN-----VKTEIITSIFDK 666 (866)
Q Consensus 611 --------~--~~~~~l~~~l~~~GV~i-~~~~~v~~i~~~~-~~~~-v~~-----~-~~~g~-----~~~~~~~~~~D~ 666 (866)
. +.....++..+..|+.+ ++++.+.++..++ +.+. +.+ . +.+|+ ..++..++++|.
T Consensus 326 ~~~~~~~~~~~e~~~a~~e~~~~~gv~~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~Gr~~p~~~~g~~~~i~~D~ 405 (485)
T TIGR01317 326 DNPWPEWPRVYRVDYAHEEAAAHYGRDPREYSILTKEFIGDDEGKVTALRTVRVEWKKSQDGKWQFVEIPGSEEVFEADL 405 (485)
T ss_pred ccCCCccchhhhhHHHHHhhhhhcCccceEEecCcEEEEEcCCCeEEEEEEEEEEeccCCCCCccceecCCceEEEECCE
Confidence 1 12222344444467654 5688888887653 3332 222 1 12332 122345799999
Q ss_pred EEEeeccc-cCCCCCCccccCeeecCCCcEE-eCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 667 LLIAIGRI-PNTNNLNIDKIGLKVNENNFII-VNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 667 vi~a~G~~-p~~~~l~l~~~gl~~~~~G~i~-Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
||+|+|+. |+..+ ++..+++++.+|++. +|++++|+.|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 406 Vi~AiG~~~p~~~~--~~~~gl~~~~~G~i~~~~~~~~Ts~~gVfAaGD~~~g~~~~~~Av~~G~~AA~~i~~ 476 (485)
T TIGR01317 406 VLLAMGFVGPEQIL--LDDFGVKKTRRGNISAGYDDYSTSIPGVFAAGDCRRGQSLIVWAINEGRKAAAAVDR 476 (485)
T ss_pred EEEccCcCCCcccc--ccccCcccCCCCCEEecCCCceECCCCEEEeeccCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999996 88876 577789888889885 56789999999999999998888899999999999999853
No 87
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=99.94 E-value=5.5e-26 Score=269.12 Aligned_cols=285 Identities=21% Similarity=0.250 Sum_probs=199.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+|+||||||||+++|..|++.|++|++||+. +.+||.+.+ | +|.. .
T Consensus 310 ~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~------~~~GG~l~~-g-ip~~------------------------~ 357 (639)
T PRK12809 310 SEKVAVIGAGPAGLGCADILARAGVQVDVFDRH------PEIGGMLTF-G-IPPF------------------------K 357 (639)
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCC------CCCCCeeec-c-CCcc------------------------c
Confidence 588999999999999999999999999999998 677876422 2 2211 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~p 548 (866)
++. .++. ....++++.|++++.++.+..+ +.+ . .....||+|++|||+.+. .++
T Consensus 358 --l~~-~~~~-----------~~~~~~~~~Gv~~~~~~~v~~~--------~~~--~-~l~~~~DaV~latGa~~~~~~~ 412 (639)
T PRK12809 358 --LDK-TVLS-----------QRREIFTAMGIDFHLNCEIGRD--------ITF--S-DLTSEYDAVFIGVGTYGMMRAD 412 (639)
T ss_pred --CCH-HHHH-----------HHHHHHHHCCeEEEcCCccCCc--------CCH--H-HHHhcCCEEEEeCCCCCCCCCC
Confidence 110 0111 1134567789999887754321 111 1 123469999999999754 333
Q ss_pred CCcCCCceEecch--------hhhcc---------ccCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcC-CCcc
Q psy9583 549 GVKFDENLILSNK--------GALEM---------INVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNF-LNTV 609 (866)
Q Consensus 549 ~~~~~~~~~~t~~--------~~~~~---------~~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~-l~~~ 609 (866)
..+.+...+++.. +.... ...+++++|+|+|.++++.|..+.++|. +|+++++++.. ++..
T Consensus 413 i~g~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~~~~~~gk~vvViGgG~~a~d~a~~~~~~Ga~~Vt~v~rr~~~~~~~~ 492 (639)
T PRK12809 413 LPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGS 492 (639)
T ss_pred CCCCccCCcEeHHHHHHHHHHhhccCccccccccccCCCCeEEEECCcHHHHHHHHHHHHcCCCeEEEeeecCcccCCCC
Confidence 3332333333321 11111 1246899999999999999999889985 79999988765 4444
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC-CeEE-EEE---ee----CCCC-----ccceeEEEeccEEEEeecccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINK-ENVL-INY---SN----KSTN-----VKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~-v~~---~~----~~g~-----~~~~~~~~~~D~vi~a~G~~p 675 (866)
+.++. .+++.||++++++.++++..++ +.+. +.+ .. .+|+ ..++...+++|.||+|+|++|
T Consensus 493 ~~e~~-----~a~~eGv~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~g~~~~i~aD~Vi~AiG~~p 567 (639)
T PRK12809 493 RKEVV-----NAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQA 567 (639)
T ss_pred HHHHH-----HHHHcCCeEEeccCCEEEEECCCCeEEEEEEEEEEecCcCCCCCccceecCCceEEEECCEEEECcCCCC
Confidence 43332 3567899999999999997654 3332 222 11 1221 122356899999999999999
Q ss_pred CCCCCCccccCeeecCCCcEEeCC----CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 676 NTNNLNIDKIGLKVNENNFIIVND----NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 676 ~~~~l~l~~~gl~~~~~G~i~Vd~----~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+...+ +++.+++++++|+|.||+ +++|+.|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 568 ~~~~~-~~~~gl~~~~~G~i~vd~~~~~~~~Ts~~gVfA~GD~~~g~~~vv~Ai~~Gr~AA~~i~~ 632 (639)
T PRK12809 568 HAMPW-LQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLT 632 (639)
T ss_pred Ccccc-ccccCcccCCCCCEEeCCCcccCcccCCCCEEEcCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 76433 577889999899999986 48999999999999998888999999999999999874
No 88
>KOG2495|consensus
Probab=99.94 E-value=4.8e-26 Score=237.89 Aligned_cols=289 Identities=18% Similarity=0.280 Sum_probs=208.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+|||+|+|.+|.+....|-..-++|++|+...++.+-+-+-.+| -
T Consensus 55 Kk~vVVLGsGW~a~S~lk~ldts~YdV~vVSPRnyFlFTPLLpS~~---------------------------------v 101 (491)
T KOG2495|consen 55 KKRVVVLGSGWGAISLLKKLDTSLYDVTVVSPRNYFLFTPLLPSTT---------------------------------V 101 (491)
T ss_pred CceEEEEcCchHHHHHHHhccccccceEEeccccceEEeeccCCcc---------------------------------c
Confidence 5789999999999999999988899999999764322222221111 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHh--CCcEEEEeEEEEeccccCcccEEEEEc--CCc----eEEEecEEEEecC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKK--NKIKFFHGHAIFTGKIQNNFHEIQIIN--KTK----ETITAKYIIIATG 541 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gV~v~~g~~v~~~~~~~~~~~v~v~~--~~g----~~i~~d~lViATG 541 (866)
-.+++..+.+..+. ...+ .++.++......+|+ +.+.+.++. .++ ..+.||+||+|+|
T Consensus 102 GTve~rSIvEPIr~-----------i~r~k~~~~~y~eAec~~iDp---~~k~V~~~s~t~~~~~~e~~i~YDyLViA~G 167 (491)
T KOG2495|consen 102 GTVELRSIVEPIRA-----------IARKKNGEVKYLEAECTKIDP---DNKKVHCRSLTADSSDKEFVIGYDYLVIAVG 167 (491)
T ss_pred cceeehhhhhhHHH-----------HhhccCCCceEEecccEeecc---cccEEEEeeeccCCCcceeeecccEEEEecc
Confidence 12333333333221 2222 267777777777766 556665543 334 6799999999999
Q ss_pred CCCcCCCCCcC--CCceEecchhhhccc----------cC----------CCeEEEECCcHHHHHHHHHHHhc-------
Q psy9583 542 SKARSFPGVKF--DENLILSNKGALEMI----------NV----------PKKLCIIGAGVIGLEIGSIWRRL------- 592 (866)
Q Consensus 542 s~p~~~p~~~~--~~~~~~t~~~~~~~~----------~~----------~~~vvVIGgG~~glE~A~~l~~~------- 592 (866)
+.+..+..++. .+.+.-...++.+++ .. --+++|||||++|+|+|..|+.+
T Consensus 168 A~~~TFgipGV~e~~~FLKEv~dAqeIR~~~~~~le~a~~~~l~~eerkRlLh~VVVGGGPTGVEFAaEL~Dfi~~Dl~k 247 (491)
T KOG2495|consen 168 AEPNTFGIPGVEENAHFLKEVEDAQEIRRKVIDNLEKAELPGLSDEERKRLLHFVVVGGGPTGVEFAAELADFIPEDLRK 247 (491)
T ss_pred CCCCCCCCCchhhchhhhhhhhHHHHHHHHHHHHHHHhhcCCCChHHhhheEEEEEECCCCcceeehHHHHHHHHHHHHH
Confidence 99886543332 222222333333331 11 13789999999999999998865
Q ss_pred -------CCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEecc
Q psy9583 593 -------GSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFD 665 (866)
Q Consensus 593 -------g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D 665 (866)
-.+||+++..+.+|+.||..+.++.++.+.+.||.+++++.|..+.... +....++|+ ..++++-
T Consensus 248 ~yp~l~~~i~vtLiEA~d~iL~mFdkrl~~yae~~f~~~~I~~~~~t~Vk~V~~~~----I~~~~~~g~----~~~iPYG 319 (491)
T KOG2495|consen 248 IYPELKKDIKVTLIEAADHILNMFDKRLVEYAENQFVRDGIDLDTGTMVKKVTEKT----IHAKTKDGE----IEEIPYG 319 (491)
T ss_pred hhhcchhheEEEeeccchhHHHHHHHHHHHHHHHHhhhccceeecccEEEeecCcE----EEEEcCCCc----eeeecce
Confidence 2379999999999999999999999999999999999999999987543 455544665 5789999
Q ss_pred EEEEeeccccCCCCCCccccCeeecCCC--cEEeCCCCCC-CCCCEEEecccCC---CCCcHHHHHHHHHHHHHHHh
Q psy9583 666 KLLIAIGRIPNTNNLNIDKIGLKVNENN--FIIVNDNCET-NIPNIYAIGDVVR---GPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 666 ~vi~a~G~~p~~~~l~l~~~gl~~~~~G--~i~Vd~~l~T-s~~~VyA~GD~a~---~~~~~~~A~~~g~~aa~~i~ 736 (866)
+++|++|..|..-. ..+.-.+++.| ++.||++||. +.+||||+|||+. .+++++.|.+||.++|+++-
T Consensus 320 ~lVWatG~~~rp~~---k~lm~~i~e~~rr~L~vDE~LrV~G~~nvfAiGDca~~~~~~~tAQVA~QqG~yLAk~fn 393 (491)
T KOG2495|consen 320 LLVWATGNGPRPVI---KDLMKQIDEQGRRGLAVDEWLRVKGVKNVFAIGDCADQRGLKPTAQVAEQQGAYLAKNFN 393 (491)
T ss_pred EEEecCCCCCchhh---hhHhhcCCccCceeeeeeceeeccCcCceEEeccccccccCccHHHHHHHHHHHHHHHHH
Confidence 99999998876533 33334444444 7999999995 7999999999993 34589999999999999973
No 89
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=3.1e-26 Score=231.55 Aligned_cols=297 Identities=23% Similarity=0.314 Sum_probs=207.9
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
.+..|||+||||||||-+||.+.+|.|.+.=++- .++||..+-.-.+ +.+. +++
T Consensus 208 ~k~~yDVLvVGgGPAgaaAAiYaARKGiRTGl~a--------erfGGQvldT~~I------------ENfI------sv~ 261 (520)
T COG3634 208 AKDAYDVLVVGGGPAGAAAAIYAARKGIRTGLVA--------ERFGGQVLDTMGI------------ENFI------SVP 261 (520)
T ss_pred ccCCceEEEEcCCcchhHHHHHHHhhcchhhhhh--------hhhCCeeccccch------------hhee------ccc
Confidence 3446999999999999999999999999977774 3578875321100 0000 000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
.-+-. ++...++...+++.|+++...... +.+-.......+|+..+|-.++++.+|+|||++.+
T Consensus 262 ----~teGp-----------kl~~ale~Hv~~Y~vDimn~qra~~l~~a~~~~~l~ev~l~nGavLkaktvIlstGArWR 326 (520)
T COG3634 262 ----ETEGP-----------KLAAALEAHVKQYDVDVMNLQRASKLEPAAVEGGLIEVELANGAVLKARTVILATGARWR 326 (520)
T ss_pred ----cccch-----------HHHHHHHHHHhhcCchhhhhhhhhcceecCCCCccEEEEecCCceeccceEEEecCcchh
Confidence 00111 122234555677777776544433 22212233566777788889999999999999877
Q ss_pred CC--CCCc-CCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHH
Q psy9583 546 SF--PGVK-FDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622 (866)
Q Consensus 546 ~~--p~~~-~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~ 622 (866)
.. |+.. +....+-.+..+.-....+|+|+|||||.+|+|.|..|+-.-.+||+++-.+.+-. | ..+++.|+
T Consensus 327 n~nvPGE~e~rnKGVayCPHCDGPLF~gK~VAVIGGGNSGvEAAIDLAGiv~hVtllEF~~eLkA--D----~VLq~kl~ 400 (520)
T COG3634 327 NMNVPGEDEYRNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPELKA--D----AVLQDKLR 400 (520)
T ss_pred cCCCCchHHHhhCCeeeCCCCCCcccCCceEEEECCCcchHHHHHhHHhhhheeeeeecchhhhh--H----HHHHHHHh
Confidence 44 4432 23333443444444445689999999999999999999998889999987665432 2 33444554
Q ss_pred H-cCCEEEeCceEEEEEEcCCeEE-EEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 623 K-QGLNIILNTKIHDIKINKENVL-INYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 623 ~-~GV~i~~~~~v~~i~~~~~~~~-v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
+ .++.++++..-++|.++++++. +.+.+ .+|. ...+.-+-|++-+|..||+++ |+.. ++++++|-|.||.
T Consensus 401 sl~Nv~ii~na~Ttei~Gdg~kV~Gl~Y~dr~sge----~~~l~LeGvFVqIGL~PNT~W--Lkg~-vel~~rGEIivD~ 473 (520)
T COG3634 401 SLPNVTIITNAQTTEVKGDGDKVTGLEYRDRVSGE----EHHLELEGVFVQIGLLPNTEW--LKGA-VELNRRGEIIVDA 473 (520)
T ss_pred cCCCcEEEecceeeEEecCCceecceEEEeccCCc----eeEEEeeeeEEEEecccChhH--hhch-hhcCcCccEEEec
Confidence 4 5899999999999999876654 34432 2332 567888899999999999999 4665 8999999999999
Q ss_pred CCCCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHHhC
Q psy9583 700 NCETNIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i~g 737 (866)
+..||+|+|||+|||+..| +....|+.+|..|+-+.+.
T Consensus 474 ~g~TsvpGvFAAGD~T~~~yKQIIIamG~GA~AaL~AFD 512 (520)
T COG3634 474 RGETNVPGVFAAGDCTTVPYKQIIIAMGEGAKASLSAFD 512 (520)
T ss_pred CCCcCCCceeecCcccCCccceEEEEecCcchhhhhhhh
Confidence 9999999999999999754 5666677777777766543
No 90
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=99.94 E-value=2.4e-24 Score=245.13 Aligned_cols=325 Identities=23% Similarity=0.284 Sum_probs=241.2
Q ss_pred HhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCCCcCCCceEe-cchhhhccc---cCCC
Q psy9583 497 KKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGVKFDENLIL-SNKGALEMI---NVPK 571 (866)
Q Consensus 497 ~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~~~~~~~~~~-t~~~~~~~~---~~~~ 571 (866)
.+.++++..++.+. ++. ..+.+.+ .++ .+.||+|++|||++|..++.......... ...+..... ...+
T Consensus 64 ~~~~i~~~~~~~v~~id~---~~~~v~~--~~g-~~~yd~LvlatGa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (415)
T COG0446 64 RATGIDVRTGTEVTSIDP---ENKVVLL--DDG-EIEYDYLVLATGARPRPPPISDWEGVVTLRLREDAEALKGGAEPPK 137 (415)
T ss_pred HhhCCEEeeCCEEEEecC---CCCEEEE--CCC-cccccEEEEcCCCcccCCCccccCceEEECCHHHHHHHHHHHhccC
Confidence 45688888877666 443 4455555 445 89999999999999997762222222222 222222221 1258
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCccc-HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEE-Ee
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVD-EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLIN-YS 649 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~-~~ 649 (866)
+++|+|+|++|+|+|..+.+.|++|++++..+++++.+. +++.+.+.+.|+++||+++++..+.+++...+..... ..
T Consensus 138 ~v~vvG~G~~gle~A~~~~~~G~~v~l~e~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~i~~~~~~~~~~~~~ 217 (415)
T COG0446 138 DVVVVGAGPIGLEAAEAAAKRGKKVTLIEAADRLGGQLLDPEVAEELAELLEKYGVELLLGTKVVGVEGKGNTLVVERVV 217 (415)
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEEcccccchhhhhHHHHHHHHHHHHHCCcEEEeCCceEEEEcccCcceeeEEE
Confidence 999999999999999999999999999999999998777 9999999999999999999999999999876543321 22
Q ss_pred eCCCCccceeEEEeccEEEEeeccccCCCCCCccccC-eeecCCCcEEeCCCCCCC-CCCEEEecccCCC----------
Q psy9583 650 NKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIG-LKVNENNFIIVNDNCETN-IPNIYAIGDVVRG---------- 717 (866)
Q Consensus 650 ~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~g-l~~~~~G~i~Vd~~l~Ts-~~~VyA~GD~a~~---------- 717 (866)
..++. .+++|.+++++|.+||..+ ..+.+ .....+|+|.||++++|+ .++|||+|||+..
T Consensus 218 ~~~~~------~~~~d~~~~~~g~~p~~~l--~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~GD~~~~~~~~~~~~~~ 289 (415)
T COG0446 218 GIDGE------EIKADLVIIGPGERPNVVL--ANDALPGLALAGGAVLVDERGGTSKDPDVYAAGDVAEIPAAETGKGGR 289 (415)
T ss_pred EeCCc------EEEeeEEEEeecccccHHH--HhhCccceeccCCCEEEccccccCCCCCEEeccceEeeecccCCceee
Confidence 22454 8999999999999999766 34443 144557889999999998 9999999999853
Q ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCCccE--EEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhhhc-CCce
Q psy9583 718 PMLAHKAEEEGIMVAEHISGQKHSINFNALPF--VIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARIL-GETS 794 (866)
Q Consensus 718 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 794 (866)
...++.|..++++++.++.+. ..+ ....++ ....+......|+++. ....++ ...........+.... ....
T Consensus 290 ~~~~~~a~~~~~i~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 364 (415)
T COG0446 290 IALWAIAVAAGRIAAENIAGA-LRI-PGLLGTVISDVGDLCAASTGLTEG--KERGID-VVLVVSGGKDPRAHLYPGAEL 364 (415)
T ss_pred eechhhHhhhhHHHHHHhccc-ccc-ccccCceEEEEcCeEEEEecCCcc--ccccee-eeEEEeccCcccccccCCCCe
Confidence 246789999999999999987 332 233343 4456778899999987 444555 3333333334344333 3345
Q ss_pred EEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHcccc
Q psy9583 795 GMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARIC 842 (866)
Q Consensus 795 g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~ 842 (866)
...|++++.++++++|+++ -. ....++.+..++..+.++.++....
T Consensus 365 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (415)
T COG0446 365 VGIKLVGDADTGRILGGQE-LE-VLKRIGALALAIGLGDTVAELDALD 410 (415)
T ss_pred EEEEEEEcCcccceehhhh-HH-HHhhhhhhhhhhhhcCchhhhhhcc
Confidence 6789999989999999999 33 6678899999999999998887653
No 91
>PRK13984 putative oxidoreductase; Provisional
Probab=99.94 E-value=3.7e-25 Score=262.00 Aligned_cols=285 Identities=22% Similarity=0.323 Sum_probs=191.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+.++|+|||+|+||+++|..|++.|++|+|+|+. +..||...+ .+|... +
T Consensus 282 ~~~~v~IIGaG~aGl~aA~~L~~~G~~v~vie~~------~~~gG~~~~--~i~~~~-------------------~--- 331 (604)
T PRK13984 282 KNKKVAIVGSGPAGLSAAYFLATMGYEVTVYESL------SKPGGVMRY--GIPSYR-------------------L--- 331 (604)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecC------CCCCceEee--cCCccc-------------------C---
Confidence 3578999999999999999999999999999997 566765321 122110 0
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~ 547 (866)
...+..+ ...++++.|++++.++.+..+. .+ + .....||+||+|||+. |+.+
T Consensus 332 -----~~~~~~~-----------~~~~~~~~gv~~~~~~~v~~~~--------~~--~-~~~~~yD~vilAtGa~~~r~l 384 (604)
T PRK13984 332 -----PDEALDK-----------DIAFIEALGVKIHLNTRVGKDI--------PL--E-ELREKHDAVFLSTGFTLGRST 384 (604)
T ss_pred -----CHHHHHH-----------HHHHHHHCCcEEECCCEeCCcC--------CH--H-HHHhcCCEEEEEcCcCCCccC
Confidence 0111111 1235677899998887653211 01 1 1235799999999987 4555
Q ss_pred CCCcCCCceEecchhhhcc-----------ccCCCeEEEECCcHHHHHHHHHHHhcCC------cEEEEecC--CcCCCc
Q psy9583 548 PGVKFDENLILSNKGALEM-----------INVPKKLCIIGAGVIGLEIGSIWRRLGS------EVTILEMS--SNFLNT 608 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~-----------~~~~~~vvVIGgG~~glE~A~~l~~~g~------~Vtli~~~--~~~l~~ 608 (866)
+.++.+...+++..+.+.. ...+++++|||||++|+|+|..+.+++. +|+++... ...++.
T Consensus 385 ~i~G~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~k~VvVIGGG~~g~e~A~~l~r~~~~~~g~~~V~v~~~~r~~~~~~~ 464 (604)
T PRK13984 385 RIPGTDHPDVIQALPLLREIRDYLRGEGPKPKIPRSLVVIGGGNVAMDIARSMARLQKMEYGEVNVKVTSLERTFEEMPA 464 (604)
T ss_pred CCCCcCCcCeEeHHHHHHHHHhhhccCCCcCCCCCcEEEECCchHHHHHHHHHHhccccccCceEEEEeccccCcccCCC
Confidence 5444444445544433321 1236899999999999999999998853 68876432 222333
Q ss_pred ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEe------eCCCCc-----cceeEEEeccEEEEeeccccC
Q psy9583 609 VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYS------NKSTNV-----KTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 609 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~------~~~g~~-----~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+.+ +.+ +.+.||+++++..+.++..+++.+. +.+. +.+|+. .++...+++|.|++|+|++|+
T Consensus 465 ~~~e----~~~-~~~~GV~i~~~~~~~~i~~~~g~v~~v~~~~~~~~~~~~G~~~~~~~~g~~~~i~aD~Vi~aiG~~p~ 539 (604)
T PRK13984 465 DMEE----IEE-GLEEGVVIYPGWGPMEVVIENDKVKGVKFKKCVEVFDEEGRFNPKFDESDQIIVEADMVVEAIGQAPD 539 (604)
T ss_pred CHHH----HHH-HHHcCCEEEeCCCCEEEEccCCEEEEEEEEEEeeccCCCCCccceecCCceEEEECCEEEEeeCCCCC
Confidence 2222 222 3457999999999988875544432 2222 112211 123457999999999999999
Q ss_pred CCCCCcc-ccCeeecCCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 677 TNNLNID-KIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 677 ~~~l~l~-~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
++++..+ ..+++++ +|+|.||++++|++|+|||+|||+.++.+ ..|+.+|+.||.+|..
T Consensus 540 ~~~l~~~~~~~l~~~-~G~i~vd~~~~Ts~~gVfAaGD~~~~~~~-v~Ai~~G~~AA~~I~~ 599 (604)
T PRK13984 540 YSYLPEELKSKLEFV-RGRILTNEYGQTSIPWLFAGGDIVHGPDI-IHGVADGYWAAEGIDM 599 (604)
T ss_pred hhhhhhhhccCcccc-CCeEEeCCCCccCCCCEEEecCcCCchHH-HHHHHHHHHHHHHHHH
Confidence 9875311 1245554 78899999999999999999999987754 6799999999999853
No 92
>PLN02852 ferredoxin-NADP+ reductase
Probab=99.93 E-value=3.6e-24 Score=241.02 Aligned_cols=293 Identities=15% Similarity=0.193 Sum_probs=195.5
Q ss_pred ccceeeecCCccHHHHHHHHHH--CCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ--LGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~--~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
..+|+||||||||++||..|++ .|++|+|||+. +.+||... .|..|.+..
T Consensus 26 ~~~VaIVGaGPAGl~AA~~L~~~~~g~~Vtv~E~~------p~pgGlvr-~gvaP~~~~--------------------- 77 (491)
T PLN02852 26 PLHVCVVGSGPAGFYTADKLLKAHDGARVDIIERL------PTPFGLVR-SGVAPDHPE--------------------- 77 (491)
T ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCeEEEEecC------CCCcceEe-eccCCCcch---------------------
Confidence 4789999999999999999987 69999999998 67777543 232232111
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCC-cC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA-RS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p-~~ 546 (866)
...+ ...+..+++..+++++.+..+.. .+.+ ++ ....||+||||||+.+ ..
T Consensus 78 ------~k~v-----------~~~~~~~~~~~~v~~~~nv~vg~--------dvtl--~~-L~~~yDaVIlAtGa~~~~~ 129 (491)
T PLN02852 78 ------TKNV-----------TNQFSRVATDDRVSFFGNVTLGR--------DVSL--SE-LRDLYHVVVLAYGAESDRR 129 (491)
T ss_pred ------hHHH-----------HHHHHHHHHHCCeEEEcCEEECc--------cccH--HH-HhhhCCEEEEecCCCCCCC
Confidence 0000 11123345567888776543321 1122 11 2346999999999986 44
Q ss_pred CCCCcCCCceEecchhhhccc-------------cCCCeEEEECCcHHHHHHHHHHHhc--------------------C
Q psy9583 547 FPGVKFDENLILSNKGALEMI-------------NVPKKLCIIGAGVIGLEIGSIWRRL--------------------G 593 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~-------------~~~~~vvVIGgG~~glE~A~~l~~~--------------------g 593 (866)
++.++.+...+++..++..+. ..+++++|||+|++|+|+|..|.+. |
T Consensus 130 l~IpG~d~~gV~~a~~fl~~~ng~~d~~~~~~~~~~gk~VvVIGgGnvAlD~Ar~L~~~~~~l~~tdi~~~~l~~l~~~~ 209 (491)
T PLN02852 130 LGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPDLKSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSS 209 (491)
T ss_pred CCCCCCCCCCeEEHHHHHHHhhcchhhhhhhhcccCCCEEEEECCCHHHHHHHHHHHhCccccccccccHHHHHHHhhCC
Confidence 544444555677665553211 2468999999999999999998875 5
Q ss_pred C-cEEEEecCCcCCCcc-cHHHH-------------------------------------HHHHHHHHH---------cC
Q psy9583 594 S-EVTILEMSSNFLNTV-DEEIA-------------------------------------KKAFHLLNK---------QG 625 (866)
Q Consensus 594 ~-~Vtli~~~~~~l~~~-d~~~~-------------------------------------~~l~~~l~~---------~G 625 (866)
. +|+++.|+...-..| ..++. +.+.+...+ ++
T Consensus 210 ~~~V~iv~RRg~~~~~ft~~Elrel~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~l~~~a~~~~~~~~~~~~~ 289 (491)
T PLN02852 210 VRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRE 289 (491)
T ss_pred CCEEEEEEcCChHhCCCCHHHHHHHhccCCCceeechhhhccccchhhhhccchhhHHHHHHHHHHHhhcccccCCCCce
Confidence 4 599999987432111 11211 122222222 57
Q ss_pred CEEEeCceEEEEEEc--C-CeE-EEEEee-----C--CCC----ccceeEEEeccEEEEeeccc--cCCCCCCccccCee
Q psy9583 626 LNIILNTKIHDIKIN--K-ENV-LINYSN-----K--STN----VKTEIITSIFDKLLIAIGRI--PNTNNLNIDKIGLK 688 (866)
Q Consensus 626 V~i~~~~~v~~i~~~--~-~~~-~v~~~~-----~--~g~----~~~~~~~~~~D~vi~a~G~~--p~~~~l~l~~~gl~ 688 (866)
|.|++...+++|..+ + +.+ .+.+.. . +|. ..++...+++|.||.++|++ |...+......++.
T Consensus 290 v~~~f~~sP~ei~~~~~~~~~v~~l~~~~~~l~~~~~~g~~~~~~tge~~~i~~D~Vi~aIG~~~~p~~~l~f~~~~gv~ 369 (491)
T PLN02852 290 LHFVFFRNPTRFLDSGDGNGHVAGVKLERTVLEGAAGSGKQVAVGTGEFEDLPCGLVLKSIGYKSLPVDGLPFDHKRGVV 369 (491)
T ss_pred EEEEccCCCeEEEccCCCCCcEEEEEEEEeecCCCcccCCcccCCCCCEEEEECCEEEEeecCCCCCCCCCccccCcCee
Confidence 999999999999742 1 222 233321 1 121 13446689999999999998 55543112334677
Q ss_pred ecCCCcEEeCCCCCCCCCCEEEecccCCCCC-cHHHHHHHHHHHHHHHhCC
Q psy9583 689 VNENNFIIVNDNCETNIPNIYAIGDVVRGPM-LAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 689 ~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~-~~~~A~~~g~~aa~~i~g~ 738 (866)
.+.+|+|.+|+.++|+.|||||+|||..+|. +...++.+|+.++.+|+..
T Consensus 370 ~n~~G~V~~d~~~~T~ipGvyAaGDi~~Gp~gvI~t~~~dA~~ta~~i~~d 420 (491)
T PLN02852 370 PNVHGRVLSSASGADTEPGLYVVGWLKRGPTGIIGTNLTCAEETVASIAED 420 (491)
T ss_pred ECCCceEEeCCCCccCCCCEEEeeeEecCCCCeeeecHhhHHHHHHHHHHH
Confidence 7888999999989999999999999998775 8889999999999999753
No 93
>KOG1346|consensus
Probab=99.92 E-value=5.9e-25 Score=226.81 Aligned_cols=411 Identities=17% Similarity=0.215 Sum_probs=260.4
Q ss_pred ccceeeecCCccHHHHHHHHHHC--CCeEEEEeccC-CCcccccCCC-ccceeccccchhHHHhhHHHHHHhhhhhhcCc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWK-DNEENFALGG-TCTNVGCIPSKALLQTSHSFENVKNSFFEYGI 465 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~-~~~~~~~~GG-~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi 465 (866)
+.-.+|||+|.+..+++...+.. +.+|.+|..++ .||-++.+.- .|.+..-.+.+.+. +..+.-
T Consensus 178 hvp~liigggtaAfaa~rai~s~da~A~vl~iseepelPYmRPPLSKELW~~~dpn~~k~lr------------fkqwsG 245 (659)
T KOG1346|consen 178 HVPYLIIGGGTAAFAAFRAIKSNDATAKVLMISEEPELPYMRPPLSKELWWYGDPNSAKKLR------------FKQWSG 245 (659)
T ss_pred cCceeEEcCCchhhhcccccccCCCCceEEeeccCccCcccCCCcchhceecCCCChhhhee------------ecccCC
Confidence 46689999999998887776655 67898887663 4666665531 11111111111110 000000
Q ss_pred cccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 466 NTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
......+....++-...+. .....-||.+.+|..+. ++. .++.+.+ ++|.+|.||+++||||.+|
T Consensus 246 keRsiffepd~FfvspeDL---------p~~~nGGvAvl~G~kvvkid~---~d~~V~L--nDG~~I~YdkcLIATG~~P 311 (659)
T KOG1346|consen 246 KERSIFFEPDGFFVSPEDL---------PKAVNGGVAVLRGRKVVKIDE---EDKKVIL--NDGTTIGYDKCLIATGVRP 311 (659)
T ss_pred ccceeEecCCcceeChhHC---------cccccCceEEEeccceEEeec---ccCeEEe--cCCcEeehhheeeecCcCc
Confidence 0000111111111111000 01234589999998877 444 3344444 6889999999999999999
Q ss_pred cCCCCCcCCC-------ceEecchhhhcccc---CCCeEEEECCcHHHHHHHHHHHhc----CCcEEEEecCCcCCC-cc
Q psy9583 545 RSFPGVKFDE-------NLILSNKGALEMIN---VPKKLCIIGAGVIGLEIGSIWRRL----GSEVTILEMSSNFLN-TV 609 (866)
Q Consensus 545 ~~~p~~~~~~-------~~~~t~~~~~~~~~---~~~~vvVIGgG~~glE~A~~l~~~----g~~Vtli~~~~~~l~-~~ 609 (866)
..++.+.... ..+.+..|+.++.. .-++|.|||+|++|.|+|..|.+. |.+|+-+......+. -+
T Consensus 312 k~l~~~~~A~~evk~kit~fr~p~DF~rlek~~aek~siTIiGnGflgSELacsl~rk~r~~g~eV~QvF~Ek~nm~kiL 391 (659)
T KOG1346|consen 312 KKLQVFEEASEEVKQKITYFRYPADFKRLEKGLAEKQSITIIGNGFLGSELACSLKRKYRNEGVEVHQVFEEKYNMEKIL 391 (659)
T ss_pred ccchhhhhcCHHhhhheeEEecchHHHHHHHhhhhcceEEEEcCcchhhhHHHHHHHhhhccCcEEEEeecccCChhhhh
Confidence 8765443211 13445666666543 348999999999999999999864 678887765554443 56
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeee
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKV 689 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~ 689 (866)
+.-++++-.+.+++.||.++.+..|.++......+.+.+. +|. ++..|+|++|+|-.||+++ .+..|+++
T Consensus 392 Peyls~wt~ekir~~GV~V~pna~v~sv~~~~~nl~lkL~--dG~------~l~tD~vVvavG~ePN~el--a~~sgLei 461 (659)
T KOG1346|consen 392 PEYLSQWTIEKIRKGGVDVRPNAKVESVRKCCKNLVLKLS--DGS------ELRTDLVVVAVGEEPNSEL--AEASGLEI 461 (659)
T ss_pred HHHHHHHHHHHHHhcCceeccchhhhhhhhhccceEEEec--CCC------eeeeeeEEEEecCCCchhh--ccccccee
Confidence 7778889999999999999999999999887777777775 787 9999999999999999999 68889999
Q ss_pred cCC-CcEEeCCCCCCCCCCEEEecccCCCC---------CcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEE-ccCcee
Q psy9583 690 NEN-NFIIVNDNCETNIPNIYAIGDVVRGP---------MLAHKAEEEGIMVAEHISGQKHSINFNALPFVIY-TFPEIA 758 (866)
Q Consensus 690 ~~~-G~i~Vd~~l~Ts~~~VyA~GD~a~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~-~~~~~a 758 (866)
|++ |++.||..|+.. .|||++||++... -.+.+|.-.||.|++||.|...++.... .+|+ ..|+++
T Consensus 462 D~~lGGfrvnaeL~ar-~NvwvAGdaacF~D~~LGrRRVehhdhavvSGRLAGENMtgAakpy~hqs--mFWsdlgP~ig 538 (659)
T KOG1346|consen 462 DEKLGGFRVNAELKAR-ENVWVAGDAACFEDGVLGRRRVEHHDHAVVSGRLAGENMTGAAKPYKHQS--MFWSDLGPEIG 538 (659)
T ss_pred ecccCcEEeeheeecc-cceeeecchhhhhcccccceeccccccceeeceecccccccccCCccccc--eeeeccCcccc
Confidence 875 779999999986 7999999999643 2356789999999999998655432222 2221 113222
Q ss_pred --eeecCHH------------------HHHhc-CCcEEEEEE--------ecCCchhhhh--cCCceEEEE-EEEECCCC
Q psy9583 759 --SVGKTEQ------------------YLKKH-NISYNVGIF--------PFLANSRARI--LGETSGMVK-ILSDMKSD 806 (866)
Q Consensus 759 --~vGl~e~------------------~a~~~-~~~~~~~~~--------~~~~~~~~~~--~~~~~g~~k-li~~~~~~ 806 (866)
.+|+-+. ++.+. +-++..... ....+..+.. ..+...|=| +||-.+++
T Consensus 539 yeaIGlvDSSLpTVgVfA~p~s~~~~~~~se~sdt~v~~~s~s~s~ss~~~~~~s~~~v~~~P~e~~~ygKgViFYl~d~ 618 (659)
T KOG1346|consen 539 YEAIGLVDSSLPTVGVFALPSSATRVDQLSESSDTDVPETSTSSSQSSKSDAGASQDGVTCDPDEAGNYGKGVIFYLKDD 618 (659)
T ss_pred cceeeecccCCCcceeeeccccccchhhhhhccCCCCccccccccccccccCCcCCCCCccCcccccccCceEEEEecCC
Confidence 2222221 11111 111111000 0000000000 111122323 45555789
Q ss_pred cEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccc
Q psy9583 807 EILGIHIIGPMASELIAEAVIAIEFRASSEDIARI 841 (866)
Q Consensus 807 ~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~ 841 (866)
.|+|+.++.-- ..|...-..|..+...+||.+.
T Consensus 619 ~iVGilLwN~F--nr~~~AR~II~d~kk~ddlnEv 651 (659)
T KOG1346|consen 619 KIVGILLWNLF--NRIGLARTIINDNKKYDDLNEV 651 (659)
T ss_pred cEEEEEehhhh--ccchhhHHHhccccchhhHHHH
Confidence 99999998764 2566677788889888888654
No 94
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=99.92 E-value=1.8e-23 Score=245.26 Aligned_cols=282 Identities=22% Similarity=0.277 Sum_probs=193.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+|+|||+||+|+++|..|++.|++|+++|+. +.+||...+ .+|...
T Consensus 137 g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~------~~~GG~l~~--gip~~~------------------------ 184 (564)
T PRK12771 137 GKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAG------PKLGGMMRY--GIPAYR------------------------ 184 (564)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEecC------CCCCCeeee--cCCCcc------------------------
Confidence 478999999999999999999999999999998 678875421 122111
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~p 548 (866)
.. ...... -...+.+.|+++..+..+..+. .. ......||+|++|||+.+. .++
T Consensus 185 ~~---~~~~~~-----------~l~~~~~~Gv~~~~~~~~~~~~--------~~---~~~~~~~D~Vi~AtG~~~~~~~~ 239 (564)
T PRK12771 185 LP---REVLDA-----------EIQRILDLGVEVRLGVRVGEDI--------TL---EQLEGEFDAVFVAIGAQLGKRLP 239 (564)
T ss_pred CC---HHHHHH-----------HHHHHHHCCCEEEeCCEECCcC--------CH---HHHHhhCCEEEEeeCCCCCCcCC
Confidence 00 001111 1223556788888776542111 00 0011248999999998753 222
Q ss_pred CCcCCCceEecchhhhc------cccCCCeEEEECCcHHHHHHHHHHHhcC-CcEEEEecCCcC-CCcccHHHHHHHHHH
Q psy9583 549 GVKFDENLILSNKGALE------MINVPKKLCIIGAGVIGLEIGSIWRRLG-SEVTILEMSSNF-LNTVDEEIAKKAFHL 620 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~------~~~~~~~vvVIGgG~~glE~A~~l~~~g-~~Vtli~~~~~~-l~~~d~~~~~~l~~~ 620 (866)
..+.....++...++.. ....+++++|+|+|.++++.+..+.+++ .+|+++++.+.. ++..+.++ +.
T Consensus 240 i~g~~~~gv~~~~~~l~~~~~~~~~~~gk~v~ViGgg~~a~d~a~~a~~lga~~v~ii~r~~~~~~~~~~~~~-----~~ 314 (564)
T PRK12771 240 IPGEDAAGVLDAVDFLRAVGEGEPPFLGKRVVVIGGGNTAMDAARTARRLGAEEVTIVYRRTREDMPAHDEEI-----EE 314 (564)
T ss_pred CCCCccCCcEEHHHHHHHhhccCCcCCCCCEEEECChHHHHHHHHHHHHcCCCEEEEEEecCcccCCCCHHHH-----HH
Confidence 22222222333222221 1234789999999999999999999998 679999887653 33333332 23
Q ss_pred HHHcCCEEEeCceEEEEEEcCCeE-EE---EEee----CCCCc---cceeEEEeccEEEEeeccccCCCCCCccc-cCee
Q psy9583 621 LNKQGLNIILNTKIHDIKINKENV-LI---NYSN----KSTNV---KTEIITSIFDKLLIAIGRIPNTNNLNIDK-IGLK 688 (866)
Q Consensus 621 l~~~GV~i~~~~~v~~i~~~~~~~-~v---~~~~----~~g~~---~~~~~~~~~D~vi~a~G~~p~~~~l~l~~-~gl~ 688 (866)
+.+.||+++++..+.++..++++. .+ .+.. .+|.. .++..++++|.||+|+|+.|+.+++ ++ .++.
T Consensus 315 a~~~GVki~~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~g~~~~i~~D~Vi~A~G~~p~~~~~--~~~~gl~ 392 (564)
T PRK12771 315 ALREGVEINWLRTPVEIEGDENGATGLRVITVEKMELDEDGRPSPVTGEEETLEADLVVLAIGQDIDSAGL--ESVPGVE 392 (564)
T ss_pred HHHcCCEEEecCCcEEEEcCCCCEEEEEEEEEEecccCCCCCeeecCCceEEEECCEEEECcCCCCchhhh--hhccCcc
Confidence 456799999999999998665432 11 1211 12210 2334689999999999999998874 43 5677
Q ss_pred ecCCCcEEeCC-CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHh
Q psy9583 689 VNENNFIIVND-NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 689 ~~~~G~i~Vd~-~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 736 (866)
+++|+|.||+ +++|++|+|||+|||+.++.++..|+.+|+.||.+|.
T Consensus 393 -~~~G~i~vd~~~~~ts~~~Vfa~GD~~~g~~~v~~Av~~G~~aA~~i~ 440 (564)
T PRK12771 393 -VGRGVVQVDPNFMMTGRPGVFAGGDMVPGPRTVTTAIGHGKKAARNID 440 (564)
T ss_pred -cCCCCEEeCCCCccCCCCCEEeccCcCCCchHHHHHHHHHHHHHHHHH
Confidence 7789999998 7899999999999999889999999999999999984
No 95
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=99.92 E-value=3.6e-23 Score=255.47 Aligned_cols=283 Identities=15% Similarity=0.137 Sum_probs=190.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.+||+||||||||++||..|++.|++|+|||+. +.+||....... .++
T Consensus 163 ~~dVvIIGaGPAGLaAA~~aar~G~~V~liD~~------~~~GG~~~~~~~-----------------------~~~--- 210 (985)
T TIGR01372 163 HCDVLVVGAGPAGLAAALAAARAGARVILVDEQ------PEAGGSLLSEAE-----------------------TID--- 210 (985)
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEecC------CCCCCeeecccc-----------------------ccC---
Confidence 589999999999999999999999999999997 567886532210 000
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEE-------------c-CCceEEEec
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQII-------------N-KTKETITAK 534 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~-------------~-~~g~~i~~d 534 (866)
..+...+.. .....++.. +++++.++.+..-. .......+. . +....+.||
T Consensus 211 -g~~~~~~~~-----------~~~~~l~~~~~v~v~~~t~V~~i~--~~~~v~~v~~~~~~~~~~~~~~~~~~~~~i~a~ 276 (985)
T TIGR01372 211 -GKPAADWAA-----------ATVAELTAMPEVTLLPRTTAFGYY--DHNTVGALERVTDHLDAPPKGVPRERLWRIRAK 276 (985)
T ss_pred -CccHHHHHH-----------HHHHHHhcCCCcEEEcCCEEEEEe--cCCeEEEEEEeeeccccccCCccccceEEEEcC
Confidence 001111111 012223334 58888776554210 000000010 0 011368999
Q ss_pred EEEEecCCCCcCCCCCcCCCceEecchhhhccc-----cCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcCCCc
Q psy9583 535 YIIIATGSKARSFPGVKFDENLILSNKGALEMI-----NVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNFLNT 608 (866)
Q Consensus 535 ~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~-----~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~l~~ 608 (866)
+||||||+.++.+|.++.+...+++...+..+. ..+++++|||+|++|+|+|..|.+.|. .|+++++.+.+
T Consensus 277 ~VILATGa~~r~~pipG~~~pgV~~~~~~~~~l~~~~~~~gk~VvViG~G~~g~e~A~~L~~~G~~vV~vv~~~~~~--- 353 (985)
T TIGR01372 277 RVVLATGAHERPLVFANNDRPGVMLAGAARTYLNRYGVAPGKRIVVATNNDSAYRAAADLLAAGIAVVAIIDARADV--- 353 (985)
T ss_pred EEEEcCCCCCcCCCCCCCCCCCcEEchHHHHHHHhhCcCCCCeEEEECCCHHHHHHHHHHHHcCCceEEEEccCcch---
Confidence 999999999987776665555666554333221 246899999999999999999999995 57888776543
Q ss_pred ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccC--
Q psy9583 609 VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIG-- 686 (866)
Q Consensus 609 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~g-- 686 (866)
...+.+.|++.||++++++.++++..++....+++...++. ..++++|.|+++.|++||++++ ..++
T Consensus 354 -----~~~l~~~L~~~GV~i~~~~~v~~i~g~~~v~~V~l~~~~g~----~~~i~~D~V~va~G~~Pnt~L~--~~lg~~ 422 (985)
T TIGR01372 354 -----SPEARAEARELGIEVLTGHVVAATEGGKRVSGVAVARNGGA----GQRLEADALAVSGGWTPVVHLF--SQRGGK 422 (985)
T ss_pred -----hHHHHHHHHHcCCEEEcCCeEEEEecCCcEEEEEEEecCCc----eEEEECCEEEEcCCcCchhHHH--HhcCCC
Confidence 23456778999999999999999986654333445421222 3479999999999999999884 4444
Q ss_pred eeecCCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHh
Q psy9583 687 LKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 687 l~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 736 (866)
+.+++.....+. .|++|+||++|||++.. .+..|..+|+.||..++
T Consensus 423 ~~~~~~~~~~~~---~t~v~gVyaaGD~~g~~-~~~~A~~eG~~Aa~~i~ 468 (985)
T TIGR01372 423 LAWDAAIAAFLP---GDAVQGCILAGAANGLF-GLAAALADGAAAGAAAA 468 (985)
T ss_pred eeeccccCceec---CCCCCCeEEeeccCCcc-CHHHHHHHHHHHHHHHH
Confidence 333332111111 37899999999999554 66779999999999885
No 96
>KOG0404|consensus
Probab=99.92 E-value=9.9e-24 Score=201.16 Aligned_cols=298 Identities=21% Similarity=0.287 Sum_probs=198.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|..+.+|+|||+|||+.+||+++++..++-+|||..- ...-..||+....- ..+. + .|++
T Consensus 5 ~~h~e~v~IiGSGPAa~tAAiYaaraelkPllfEG~~--~~~i~pGGQLtTTT------------~veN----f--PGFP 64 (322)
T KOG0404|consen 5 MTHNENVVIIGSGPAAHTAAIYAARAELKPLLFEGMM--ANGIAPGGQLTTTT------------DVEN----F--PGFP 64 (322)
T ss_pred ceeeeeEEEEccCchHHHHHHHHhhcccCceEEeeee--ccCcCCCceeeeee------------cccc----C--CCCC
Confidence 4444689999999999999999999999999999741 01112355432110 0000 0 1122
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
. .+.-..+.++ +.....+.|.+++..++..++. ....+.+.+ +.+.+.+|.+|+|||+..+.
T Consensus 65 d---gi~G~~l~d~-----------mrkqs~r~Gt~i~tEtVskv~~---sskpF~l~t-d~~~v~~~avI~atGAsAkR 126 (322)
T KOG0404|consen 65 D---GITGPELMDK-----------MRKQSERFGTEIITETVSKVDL---SSKPFKLWT-DARPVTADAVILATGASAKR 126 (322)
T ss_pred c---ccccHHHHHH-----------HHHHHHhhcceeeeeehhhccc---cCCCeEEEe-cCCceeeeeEEEecccceee
Confidence 1 1111222222 2334667789988887666544 335566655 34679999999999988764
Q ss_pred --CCCCcCCC---ceEecchhhh--ccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHH
Q psy9583 547 --FPGVKFDE---NLILSNKGAL--EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFH 619 (866)
Q Consensus 547 --~p~~~~~~---~~~~t~~~~~--~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~ 619 (866)
+|+.+... ..+-.+.-+. ......|-++|||||.+++|-|.+|.+.+.+|++++|++.+... ....++
T Consensus 127 l~~pg~ge~~fWqrGiSaCAVCDGaapifrnk~laVIGGGDsA~EEA~fLtkyaskVyii~Rrd~fRAs-----~~Mq~r 201 (322)
T KOG0404|consen 127 LHLPGEGEGEFWQRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEALFLTKYASKVYIIHRRDHFRAS-----KIMQQR 201 (322)
T ss_pred eecCCCCcchHHhcccchhhcccCcchhhcCCeeEEEcCcHHHHHHHHHHHhhccEEEEEEEhhhhhHH-----HHHHHH
Confidence 44442111 1111111111 11134688999999999999999999999999999999987541 122234
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEE-EEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEe
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVL-INYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIV 697 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~V 697 (866)
.++.-+|++++++.+.+...+++.+. +.+.+ ..|. ...++.+-+++++|..|++.+| +. ++++|.+|+|++
T Consensus 202 a~~npnI~v~~nt~~~ea~gd~~~l~~l~ikn~~tge----~~dl~v~GlFf~IGH~Pat~~l--~g-qve~d~~GYi~t 274 (322)
T KOG0404|consen 202 AEKNPNIEVLYNTVAVEALGDGKLLNGLRIKNVKTGE----ETDLPVSGLFFAIGHSPATKFL--KG-QVELDEDGYIVT 274 (322)
T ss_pred HhcCCCeEEEechhhhhhccCcccccceEEEecccCc----ccccccceeEEEecCCchhhHh--cC-ceeeccCceEEe
Confidence 45567899999999988877643221 22221 1222 4579999999999999999994 55 799999999998
Q ss_pred C-CCCCCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHH
Q psy9583 698 N-DNCETNIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEH 734 (866)
Q Consensus 698 d-~~l~Ts~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~ 734 (866)
- ..-.||+|++||+||+.. .++.+..|...|.+||..
T Consensus 275 ~pgts~TsvpG~FAAGDVqD~kyRQAvTaAgsGciaald 313 (322)
T KOG0404|consen 275 RPGTSLTSVPGVFAAGDVQDKKYRQAVTAAGSGCIAALD 313 (322)
T ss_pred ccCcccccccceeeccccchHHHHHHHhhhccchhhhhh
Confidence 7 567899999999999985 355666666666666643
No 97
>PF02852 Pyr_redox_dim: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; InterPro: IPR004099 This entry represents a dimerisation domain that is usually found at the C-terminal of both class I and class II oxidoreductases, as well as in NADH oxidases and peroxidases [, , ].; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0045454 cell redox homeostasis, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3II4_B 2A8X_A 2BC0_B 2BC1_B 2W0H_A 2X50_B 2JK6_A 2YAU_A 2EQ9_E 2EQ6_B ....
Probab=99.89 E-value=1.4e-22 Score=183.99 Aligned_cols=110 Identities=49% Similarity=0.703 Sum_probs=106.0
Q ss_pred ccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHH
Q psy9583 747 LPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAV 826 (866)
Q Consensus 747 ~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~ 826 (866)
+|+++|++|++++||+||+||++.|+++.+..+++....++.+.+++.||+||++|+++++|||+|++|+++.|+|+.++
T Consensus 1 vP~~vft~p~ia~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~t~~IlGa~~vg~~a~e~I~~~~ 80 (110)
T PF02852_consen 1 VPTVVFTDPEIASVGLTEEEARKQGIDYEVVTVPFKSNDRARYYPETEGFVKLIFDKKTGRILGAQIVGPNASELINELA 80 (110)
T ss_dssp CEEEEESSSEEEEEES-HHHHHHHTSGEEEEEEEEGGEHHHHHTTTTEEEEEEEEETTTTBEEEEEEEETTHHHHHHHHH
T ss_pred CCEEEECCCceEEEccCHHHHHhccCceeeeeecccccchhcccCCcceeeEEEEEeeccceeeeeeecCchHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 827 IAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 827 ~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
++|++++|++++.+.+++|||++|++.+||
T Consensus 81 ~ai~~~~t~~~l~~~~~~~Pt~se~~~~a~ 110 (110)
T PF02852_consen 81 LAIQNGLTVEDLADDIFYHPTFSEAIQEAA 110 (110)
T ss_dssp HHHHTTSBHHHHHTSBSSSTSTGHHHHHHH
T ss_pred HHHHcCCCHHHHhCCeeeCCChhHHHHHhC
Confidence 999999999999999999999999999886
No 98
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=99.89 E-value=1.9e-21 Score=220.23 Aligned_cols=305 Identities=14% Similarity=0.132 Sum_probs=187.4
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceecccc--------chhHHHhhHHHHHHhhhh
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIP--------SKALLQTSHSFENVKNSF 460 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P--------~~~~~~~~~~~~~~~~~~ 460 (866)
..++|+|||||+|||+||.+|++.|++|++||+. +.+||.|.+....+ .+... ....+..+..+.
T Consensus 9 ~~~~VaIIGAG~aGL~aA~~l~~~G~~v~vfE~~------~~vGG~W~~~~~~~~d~~~~~~~~~~~-~s~~Y~~L~tn~ 81 (461)
T PLN02172 9 NSQHVAVIGAGAAGLVAARELRREGHTVVVFERE------KQVGGLWVYTPKSESDPLSLDPTRSIV-HSSVYESLRTNL 81 (461)
T ss_pred CCCCEEEECCcHHHHHHHHHHHhcCCeEEEEecC------CCCcceeecCCCcCCCccccCCCCccc-chhhhhhhhccC
Confidence 3589999999999999999999999999999998 78999997653221 11000 011222222111
Q ss_pred hhc--C---ccccccccC---HHHHHHHHHHHHHhhhhhHHHHHHhCCcE--EEEeEEEE-eccccCcccEEEEEc--CC
Q psy9583 461 FEY--G---INTQNVTLN---LQKMLERKNNIIKKNNSGILFLFKKNKIK--FFHGHAIF-TGKIQNNFHEIQIIN--KT 527 (866)
Q Consensus 461 ~~~--g---i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~gV~--v~~g~~v~-~~~~~~~~~~v~v~~--~~ 527 (866)
... + ++......+ ....+... ..+...++.+.++.++. +.+++.+. ++. ..+.+.|.. .+
T Consensus 82 p~~~m~f~dfp~~~~~~~~~~~~~~fp~~----~ev~~YL~~~a~~fgl~~~I~~~t~V~~V~~---~~~~w~V~~~~~~ 154 (461)
T PLN02172 82 PRECMGYRDFPFVPRFDDESRDSRRYPSH----REVLAYLQDFAREFKIEEMVRFETEVVRVEP---VDGKWRVQSKNSG 154 (461)
T ss_pred CHhhccCCCCCCCcccccccCcCCCCCCH----HHHHHHHHHHHHHcCCcceEEecCEEEEEee---cCCeEEEEEEcCC
Confidence 110 1 111000000 00000011 12233456667778887 66776665 332 234455543 22
Q ss_pred c--eEEEecEEEEecC--CCCcCCCCCcC---CCceEecchhhhccc-cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEE
Q psy9583 528 K--ETITAKYIIIATG--SKARSFPGVKF---DENLILSNKGALEMI-NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTIL 599 (866)
Q Consensus 528 g--~~i~~d~lViATG--s~p~~~p~~~~---~~~~~~t~~~~~~~~-~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli 599 (866)
+ .+..||+||+||| +.|+.|+.++. .+. .+++.++.... ..+|+|+|||+|.+|+|+|..|...+.+|+++
T Consensus 155 ~~~~~~~~d~VIvAtG~~~~P~~P~ipG~~~f~G~-~iHs~~yr~~~~~~gk~VvVVG~G~Sg~diA~~L~~~a~~V~l~ 233 (461)
T PLN02172 155 GFSKDEIFDAVVVCNGHYTEPNVAHIPGIKSWPGK-QIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIA 233 (461)
T ss_pred CceEEEEcCEEEEeccCCCCCcCCCCCCcccCCce-EEEecccCCccccCCCEEEEECCCcCHHHHHHHHHHhCCeEEEE
Confidence 2 2568999999999 56776654432 222 23333332222 25799999999999999999999999999999
Q ss_pred ecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 600 EMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 600 ~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.|+..+.. ...+......+..+..|..+..++ . +.+. +|. .+++|.||+|||++++.++
T Consensus 234 ~r~~~~~~----------~~~~~~~~~~v~~~~~I~~~~~~g-~--V~f~--DG~------~~~~D~Ii~~TGy~~~~pf 292 (461)
T PLN02172 234 SRASESDT----------YEKLPVPQNNLWMHSEIDTAHEDG-S--IVFK--NGK------VVYADTIVHCTGYKYHFPF 292 (461)
T ss_pred Eeeccccc----------cccCcCCCCceEECCcccceecCC-e--EEEC--CCC------CccCCEEEECCcCCccccc
Confidence 99764321 011112234556667776665332 2 5554 665 6789999999999999998
Q ss_pred CCccccCeeecCCCcEEeCCCC---------CCC-CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC
Q psy9583 680 LNIDKIGLKVNENNFIIVNDNC---------ETN-IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK 739 (866)
Q Consensus 680 l~l~~~gl~~~~~G~i~Vd~~l---------~Ts-~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~ 739 (866)
| +.. |.+.+|+.. -.. .|+++.+|=.. .......+-.|++.+|.-+.|+.
T Consensus 293 L--~~~-------~~i~v~~~~v~~Ly~~~f~~~~~p~LafiG~~~-~~~~f~~~E~Qa~~~a~v~sG~~ 352 (461)
T PLN02172 293 L--ETN-------GYMRIDENRVEPLYKHVFPPALAPGLSFIGLPA-MGIQFVMFEIQSKWVAAVLSGRV 352 (461)
T ss_pred c--Ccc-------cceeeCCCcchhhHHhhcCCCCCCcEEEEeccc-cccCchhHHHHHHHHHHHHcCCC
Confidence 5 332 334343321 123 48999999553 23356788899999999988763
No 99
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
Probab=99.82 E-value=1.7e-19 Score=201.32 Aligned_cols=289 Identities=23% Similarity=0.257 Sum_probs=198.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+|.|||+||||++||..|++.|++|+++|+. +..||... +|++....
T Consensus 124 ~~VaviGaGPAGl~~a~~L~~~G~~Vtv~e~~------~~~GGll~--------------------------yGIP~~kl 171 (457)
T COG0493 124 KKVAVIGAGPAGLAAADDLSRAGHDVTVFERV------ALDGGLLL--------------------------YGIPDFKL 171 (457)
T ss_pred CEEEEECCCchHhhhHHHHHhCCCeEEEeCCc------CCCceeEE--------------------------ecCchhhc
Confidence 78999999999999999999999999999997 67777543 23332111
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFPG 549 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p~ 549 (866)
. ..+. +.....+++.|++++.+..+-.+. ++ + ...-.||++++|||+. |+..+.
T Consensus 172 ~---k~i~-----------d~~i~~l~~~Gv~~~~~~~vG~~i--------t~--~-~L~~e~Dav~l~~G~~~~~~l~i 226 (457)
T COG0493 172 P---KDIL-----------DRRLELLERSGVEFKLNVRVGRDI--------TL--E-ELLKEYDAVFLATGAGKPRPLDI 226 (457)
T ss_pred c---chHH-----------HHHHHHHHHcCeEEEEcceECCcC--------CH--H-HHHHhhCEEEEeccccCCCCCCC
Confidence 1 0111 112445777889998887664221 11 1 1223469999999975 544433
Q ss_pred CcCCCceEecchhhhcc---------------ccCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcC--CCcccH
Q psy9583 550 VKFDENLILSNKGALEM---------------INVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNF--LNTVDE 611 (866)
Q Consensus 550 ~~~~~~~~~t~~~~~~~---------------~~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~--l~~~d~ 611 (866)
.+.+...++...+++.. ...+++++|||||.++++++....+.|. +|+.+++...- ...++.
T Consensus 227 ~g~d~~gv~~A~dfL~~~~~~~~~~~~~~~~~~~~gk~vvVIGgG~Ta~D~~~t~~r~Ga~~v~~~~~~~~~~~~~~~~~ 306 (457)
T COG0493 227 PGEDAKGVAFALDFLTRLNKEVLGDFAEDRTPPAKGKRVVVIGGGDTAMDCAGTALRLGAKSVTCFYREDRDDETNEWPT 306 (457)
T ss_pred CCcCCCcchHHHHHHHHHHHHHhcccccccCCCCCCCeEEEECCCCCHHHHHHHHhhcCCeEEEEeccccccccCCcccc
Confidence 33333344433222211 0123899999999999999999999998 57777532221 112222
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEE----EEEeeC---CC-------CccceeEEEeccEEEEeeccccC
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVL----INYSNK---ST-------NVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~----v~~~~~---~g-------~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.......+.....|+++.+.....++..+++ .+. ..+... ++ ...+....+.+|.|+.|+|+.++
T Consensus 307 ~~~~~~~~~a~eeg~~~~~~~~~~~~~~~e~GrV~~~~~~~~~~~~~~~~~~r~~p~~v~gs~~~~~aD~v~~aig~~~~ 386 (457)
T COG0493 307 WAAQLEVRSAGEEGVERLPFVQPKAFIGNEGGRVTGVKFGRVEPGEYVDGWGRRGPVGVIGTEKTDAADTVILAIGFEGD 386 (457)
T ss_pred cchhhhhhhhhhcCCcccccCCceeEeecCCCcEeeeecccccccCcccccccccCccccCceEEehHHHHHHHhccCCC
Confidence 2345566777788999998888888887543 332 111111 11 01234678999999999999988
Q ss_pred CCCCCccccCeeecCCCcEEeCCCC-CCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHh
Q psy9583 677 TNNLNIDKIGLKVNENNFIIVNDNC-ETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 677 ~~~l~l~~~gl~~~~~G~i~Vd~~l-~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 736 (866)
.........++..+.+|.|.+|+.+ +|+.|++||.||+..+..+...|+.+||.+|+.|-
T Consensus 387 ~~~~~~~~~~~~~~~~g~i~~~~~~~~ts~~~vfa~gD~~~g~~~vv~ai~eGr~aak~i~ 447 (457)
T COG0493 387 ATDGLLLEFGLKLDKRGRIKVDENLQQTSIPGVFAGGDAVRGAALVVWAIAEGREAAKAID 447 (457)
T ss_pred cccccccccccccCCCCceecccccccccCCCeeeCceeccchhhhhhHHhhchHHHHhhh
Confidence 6653233446788889999999998 99999999999999888899999999999998874
No 100
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=99.80 E-value=3.3e-18 Score=196.29 Aligned_cols=313 Identities=19% Similarity=0.213 Sum_probs=157.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceec-----cc---cchhHHHhhHHHHHHhhhhhh
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVG-----CI---PSKALLQTSHSFENVKNSFFE 462 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g-----~~---P~~~~~~~~~~~~~~~~~~~~ 462 (866)
.+|+|||||++||++|..|.+.|++++++|+. +.+||+|.+.. +. ++-.. ..+..... +..
T Consensus 2 krVaVIGaG~sGL~a~k~l~e~g~~~~~fE~~------~~iGG~W~~~~~~~~g~~~~y~sl~~-n~sk~~~~----fsd 70 (531)
T PF00743_consen 2 KRVAVIGAGPSGLAAAKNLLEEGLEVTCFEKS------DDIGGLWRYTENPEDGRSSVYDSLHT-NTSKEMMA----FSD 70 (531)
T ss_dssp -EEEEE--SHHHHHHHHHHHHTT-EEEEEESS------SSSSGGGCHSTTCCCSEGGGSTT-B--SS-GGGSC----CTT
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCeEEecC------CCCCccCeeCCcCCCCccccccceEE-eeCchHhc----CCC
Confidence 57999999999999999999999999999998 89999997532 11 11000 00100000 111
Q ss_pred cCccccc-cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcE--EEEeEEEE-ecccc--CcccEEEEEcC-Cc--eEEEe
Q psy9583 463 YGINTQN-VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIK--FFHGHAIF-TGKIQ--NNFHEIQIINK-TK--ETITA 533 (866)
Q Consensus 463 ~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~--v~~g~~v~-~~~~~--~~~~~v~v~~~-~g--~~i~~ 533 (866)
+-++... ......++.++ ++.+.++.++. +.+++.|. +...+ .....+.|.+. ++ ++-.|
T Consensus 71 fp~p~~~p~f~~~~~v~~Y-----------l~~Ya~~f~L~~~I~fnt~V~~v~~~~d~~~~~~W~V~~~~~g~~~~~~f 139 (531)
T PF00743_consen 71 FPFPEDYPDFPSHSEVLEY-----------LESYAEHFGLRKHIRFNTEVVSVERDPDFSATGKWEVTTENDGKEETEEF 139 (531)
T ss_dssp S-HCCCCSSSEBHHHHHHH-----------HHHHHHHTTGGGGEETSEEEEEEEEETTTT-ETEEEEEETTTTEEEEEEE
T ss_pred cCCCCCCCCCCCHHHHHHH-----------HHHHHhhhCCcceEEEccEEeEeeeccccCCCceEEEEeecCCeEEEEEe
Confidence 1111111 11223333333 44455555553 45555555 32211 11235555542 33 45679
Q ss_pred cEEEEecCCC--CcCC----CCCcCCCceEecchhhhccc-cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC
Q psy9583 534 KYIIIATGSK--ARSF----PGVKFDENLILSNKGALEMI-NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL 606 (866)
Q Consensus 534 d~lViATGs~--p~~~----p~~~~~~~~~~t~~~~~~~~-~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l 606 (866)
|+||+|||.. |..| ||.+...-.++++.++.+.. ..+|+|+|||+|.+|+++|..+++...+|++..|+..+.
T Consensus 140 D~VvvatG~~~~P~~P~~~~~G~e~F~G~i~HS~~yr~~~~f~gKrVlVVG~g~Sg~DIa~el~~~a~~v~~s~R~~~wv 219 (531)
T PF00743_consen 140 DAVVVATGHFSKPNIPEPSFPGLEKFKGEIIHSKDYRDPEPFKGKRVLVVGGGNSGADIAVELSRVAKKVYLSTRRGAWV 219 (531)
T ss_dssp CEEEEEE-SSSCESB-----CTGGGHCSEEEEGGG--TGGGGTTSEEEEESSSHHHHHHHHHHTTTSCCEEEECC-----
T ss_pred CeEEEcCCCcCCCCCChhhhhhhhcCCeeEEccccCcChhhcCCCEEEEEeCCHhHHHHHHHHHHhcCCeEEEEeccccc
Confidence 9999999953 5543 34322223466666665544 358999999999999999999999999999988876542
Q ss_pred -Ccc-------cHH----------------HHHHHH-HHHHH------cCCEEE------------------------eC
Q psy9583 607 -NTV-------DEE----------------IAKKAF-HLLNK------QGLNII------------------------LN 631 (866)
Q Consensus 607 -~~~-------d~~----------------~~~~l~-~~l~~------~GV~i~------------------------~~ 631 (866)
+.+ |.- +...+. +.+.+ .|..-. ..
T Consensus 220 ~pr~~~~G~P~D~~~~~R~~~~l~~~lp~~~~~~~~~~~l~~~~~~~~~gl~p~~~~~~~~~~ind~l~~~i~~G~i~vk 299 (531)
T PF00743_consen 220 LPRYWDNGYPFDMVFSTRFSSFLQKNLPESLSNWLLEKKLNKRFDHENYGLKPKHRFFSQHPTINDELPNRIRSGRIKVK 299 (531)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 211 100 111110 11100 011000 00
Q ss_pred ceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC---CCCCCCE
Q psy9583 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC---ETNIPNI 708 (866)
Q Consensus 632 ~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l---~Ts~~~V 708 (866)
..|.++. ++ .+.+. ||. ...++|.||+|||++...++| ++.-+... ++.+..-.++ .-..|++
T Consensus 300 ~~I~~~~--~~--~v~F~--DGs-----~~e~vD~II~~TGY~~~fpFL--~~~~~~~~-~~~~~LYk~vfp~~~~~ptL 365 (531)
T PF00743_consen 300 PDIKRFT--EN--SVIFE--DGS-----TEEDVDVIIFCTGYKFSFPFL--DESLIKVD-DNRVRLYKHVFPPNLDHPTL 365 (531)
T ss_dssp E-EEEE---SS--EEEET--TSE-----EEEE-SEEEE---EE---TTB---TTTT-S--SSSSSEETTTEETETTSTTE
T ss_pred ccccccc--cc--ccccc--ccc-----ccccccccccccccccccccc--cccccccc-cccccccccccccccccccc
Confidence 0111111 11 12232 443 235799999999999999885 33333333 2223222222 1245899
Q ss_pred EEecccCCCCCcHHHHHHHHHHHHHHHhCCC
Q psy9583 709 YAIGDVVRGPMLAHKAEEEGIMVAEHISGQK 739 (866)
Q Consensus 709 yA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~ 739 (866)
..+|=+.........+-.|++.+|+-+.|..
T Consensus 366 afIG~~~~~g~~fp~~ElQArw~a~v~sG~~ 396 (531)
T PF00743_consen 366 AFIGLVQPFGSIFPIFELQARWAARVFSGRV 396 (531)
T ss_dssp EESS-SBSSS-HHHHHHHHHHHHHHHHTTSS
T ss_pred ccccccccccccccccccccccccccccccc
Confidence 9999765322356779999999999998864
No 101
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Probab=99.76 E-value=2.5e-17 Score=193.73 Aligned_cols=288 Identities=17% Similarity=0.185 Sum_probs=167.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHH-hhHHHHHH---hhhhhhcCc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQ-TSHSFENV---KNSFFEYGI 465 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~-~~~~~~~~---~~~~~~~gi 465 (866)
.++|+||||||||++||.+|++.|++|+++|+. ...|+..... -|-+.+.. .....+.. ...+..+|+
T Consensus 383 gKKVaVVGaGPAGLsAA~~La~~Gh~Vtv~E~~------~i~gl~~~~~--~~i~~~~~~~~~L~er~p~~~GG~~~yGI 454 (1028)
T PRK06567 383 NYNILVTGLGPAGFSLSYYLLRSGHNVTAIDGL------KITLLPFDVH--KPIKFWHEYKNLLSERMPRGFGGVAEYGI 454 (1028)
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCeEEEEccc------cccccccccc--cccchhhhhccchhhhccccCCcccccCc
Confidence 579999999999999999999999999999986 3333321100 01000000 00011111 001233333
Q ss_pred cccccccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCC-C
Q psy9583 466 NTQNVTLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGS-K 543 (866)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs-~ 543 (866)
+ +.|.+-. .+ .+...++. .++.++.|.....+. ++ ++-....||+|+||||+ .
T Consensus 455 p-----~R~~k~~------l~----~i~~il~~g~~v~~~~gv~lG~di--------t~--edl~~~gyDAV~IATGA~k 509 (1028)
T PRK06567 455 T-----VRWDKNN------LD----ILRLILERNNNFKYYDGVALDFNI--------TK--EQAFDLGFDHIAFCIGAGQ 509 (1028)
T ss_pred c-----ccchHHH------HH----HHHHHHhcCCceEEECCeEECccC--------CH--HHHhhcCCCEEEEeCCCCC
Confidence 3 2222211 11 01112222 245555565432211 11 11134679999999999 6
Q ss_pred CcCCCCCcCCCceEecchhhhccc--------------cCCCeEEEECCcHHHHHHHHHHHh------------------
Q psy9583 544 ARSFPGVKFDENLILSNKGALEMI--------------NVPKKLCIIGAGVIGLEIGSIWRR------------------ 591 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~~~~~~~--------------~~~~~vvVIGgG~~glE~A~~l~~------------------ 591 (866)
|+.++.++.+...+++..+++... ..+++|+|||||.+|+|+|....+
T Consensus 510 pr~L~IPGeda~GV~sA~DfL~~l~~~~~~~~~~~~~~~~Gk~VVVIGGGnTAmD~ArtAlr~~~l~ve~~l~~~~~~~~ 589 (1028)
T PRK06567 510 PKVLDIENFEAKGVKTASDFLMTLQSGGAFLKNSNTNMVIRMPIAVIGGGLTSLDAATESLYYYKKQVEEFAKDYIEKDL 589 (1028)
T ss_pred CCCCCCCCccCCCeEEHHHHHHHHhhcccccccccCcccCCCCEEEEcCcHHHHHHHHHHHhhccchhhHHHHhhhhhhc
Confidence 887776666667788776654331 135799999999999999983322
Q ss_pred ---------------------------------cCCcEEEEecCCcCC-CcccHHHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 592 ---------------------------------LGSEVTILEMSSNFL-NTVDEEIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 592 ---------------------------------~g~~Vtli~~~~~~l-~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
.|. |++++|+..-- +... ...+.+.+ ..+.||+|+.+..+.++
T Consensus 590 ~~~d~eia~~f~~h~r~~g~~~~~~~v~~l~~~~G~-VtIvYRr~~~empA~~-~~~eEv~~-A~eEGV~f~~~~~P~~i 666 (1028)
T PRK06567 590 TEEDKEIAEEFIAHAKLFKEAKNNEELRKVFNKLGG-ATVYYRGRLQDSPAYK-LNHEELIY-ALALGVDFKENMQPLRI 666 (1028)
T ss_pred ccccHHHHHHHHHHHHhhcchhccchhhhhhccCCc-eEEEecCChhhCCCCC-CCHHHHHH-HHHcCcEEEecCCcEEE
Confidence 222 88888876432 3220 00122333 34469999999999999
Q ss_pred EEcC-CeEE-EEEeeC-------CCC---------------ccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCC
Q psy9583 638 KINK-ENVL-INYSNK-------STN---------------VKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENN 693 (866)
Q Consensus 638 ~~~~-~~~~-v~~~~~-------~g~---------------~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G 693 (866)
..++ +.+. +.+... .|. ......+++||.||+|+|..||+.+. . +
T Consensus 667 ~~d~~g~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vi~A~G~~~~~~~~---------~-~- 735 (1028)
T PRK06567 667 NVDKYGHVESVEFENRNRHCEQSKTAWQSHEFGLTRLPRQCYAFPRNDIKTKTVIMAIGIENNTQFD---------E-D- 735 (1028)
T ss_pred EecCCCeEEEEEEEEEecccccccccccccccccCCcCcccCCCccccccCCEEEEecccCCccccc---------c-c-
Confidence 7654 3322 222210 111 01134689999999999999999872 0 0
Q ss_pred cEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHh
Q psy9583 694 FIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 694 ~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~ 736 (866)
+..+-++.+++|+- ....|+.+|+.++.+|.
T Consensus 736 ----~~s~~~d~~~~f~G--------tvv~A~as~k~~~~~i~ 766 (1028)
T PRK06567 736 ----KYSYFGDCNPKYSG--------SVVKALASSKEGYDAIN 766 (1028)
T ss_pred ----ccccccCCCCcccc--------HHHHHHHHHHhHHHHHH
Confidence 11222344556654 67889999999999993
No 102
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=99.76 E-value=2.5e-18 Score=174.93 Aligned_cols=190 Identities=29% Similarity=0.431 Sum_probs=120.3
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNVT 471 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~~ 471 (866)
||+|||||+||++||.+|++.+.+++|||+.+ +.|....|++...+............ ...+
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~~~v~ii~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------- 62 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPGAKVLIIEKSP---------GTPYNSGCIPSPLLVEIAPHRHEFLP-ARLF-------- 62 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEESSSS---------HHHHHHSHHHHHHHHHHHHHHHHHHH-HHHG--------
T ss_pred CEEEEecHHHHHHHHHHHhcCCCeEEEEeccc---------cccccccccccccccccccccccccc-cccc--------
Confidence 79999999999999999999999999998751 12222334443333222221111100 0000
Q ss_pred cCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEE-EEeccccCc----ccEEEE-EcCCceEEEecEEEEecCCCCc
Q psy9583 472 LNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHA-IFTGKIQNN----FHEIQI-INKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~-v~~~~~~~~----~~~v~v-~~~~g~~i~~d~lViATGs~p~ 545 (866)
.+...++..++++..+.. ..++..... ...+.. ...++..+.||+||+|||+.|.
T Consensus 63 -------------------~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~ 123 (201)
T PF07992_consen 63 -------------------KLVDQLKNRGVEIRLNAKVVSIDPESKRVVCPAVTIQVVETGDGREIKYDYLVIATGSRPR 123 (201)
T ss_dssp -------------------HHHHHHHHHTHEEEHHHTEEEEEESTTEEEETCEEEEEEETTTEEEEEEEEEEEESTEEEE
T ss_pred -------------------ccccccccceEEEeeccccccccccccccccCcccceeeccCCceEecCCeeeecCccccc
Confidence 112223456777744333 223321110 011222 3345688999999999999987
Q ss_pred CCCCCcC----CCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH
Q psy9583 546 SFPGVKF----DENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621 (866)
Q Consensus 546 ~~p~~~~----~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l 621 (866)
.++.++. ....+.+...+......+++++|||
T Consensus 124 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG-------------------------------------------- 159 (201)
T PF07992_consen 124 TPNIPGEEVAYFLRGVDDAQRFLELLESPKRVAVVG-------------------------------------------- 159 (201)
T ss_dssp EESSTTTTTECBTTSEEHHHHHHTHSSTTSEEEEES--------------------------------------------
T ss_pred eeecCCCccccccccccccccccccccccccccccc--------------------------------------------
Confidence 5533332 1244667777777767778999999
Q ss_pred HHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 622 NKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
.+.|. +..+++++++|++.||+++
T Consensus 160 -------------------------------------------------------~~~l~-~~~~~~~~~~g~i~vd~~~ 183 (201)
T PF07992_consen 160 -------------------------------------------------------TEFLA-EKLGVELDENGFIKVDENL 183 (201)
T ss_dssp -------------------------------------------------------TTTST-HHTTSTBTTTSSBEEBTTS
T ss_pred -------------------------------------------------------ccccc-ccccccccccccccccccc
Confidence 33432 6778899889999999999
Q ss_pred CCCCCCEEEecccCCCC
Q psy9583 702 ETNIPNIYAIGDVVRGP 718 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~~ 718 (866)
||++|||||+|||++.+
T Consensus 184 ~t~~~~Iya~GD~a~~~ 200 (201)
T PF07992_consen 184 QTSVPGIYAAGDCAGIY 200 (201)
T ss_dssp BBSSTTEEE-GGGBEES
T ss_pred ccccccccccccccccC
Confidence 99999999999999643
No 103
>PF00364 Biotin_lipoyl: Biotin-requiring enzyme; InterPro: IPR000089 The biotin / lipoyl attachment domain has a conserved lysine residue that binds biotin or lipoic acid. Biotin plays a catalytic role in some carboxyl transfer reactions and is covalently attached, via an amide bond, to a lysine residue in enzymes requiring this coenzyme []. E2 acyltransferases have an essential cofactor, lipoic acid, which is covalently bound via an amide linkage to a lysine group []. The lipoic acid cofactor is found in a variety of proteins that include, H-protein of the glycine cleavage system (GCS), mammalian and yeast pyruvate dehydrogenases and fast migrating protein (FMP) (gene acoC) from Ralstonia eutropha (Alcaligenes eutrophus).; PDB: 2EJG_D 2D5D_A 2EJF_C 2EVB_A 1IYV_A 1IYU_A 1LAC_A 1LAB_A 1DCZ_A 1DD2_A ....
Probab=99.72 E-value=1.3e-17 Score=138.52 Aligned_cols=74 Identities=39% Similarity=0.679 Sum_probs=72.2
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEE
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALI 77 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~ 77 (866)
.+|++|.+|..+++++|.+|++++||.|++||+||+|||||+.++|+||.+|+|.++++++|+.|++|++|+.|
T Consensus 1 ~~i~~P~~G~~~~~~~i~~~~v~~G~~V~~G~~l~~iet~K~~~~v~a~~~G~i~~i~v~~G~~V~~G~~l~~I 74 (74)
T PF00364_consen 1 TEIKAPMLGEVMEEGTITKWLVEEGDKVKKGDPLAEIETMKMEMEVEAPVSGIIKEILVEEGDTVEVGQVLAII 74 (74)
T ss_dssp EEEEESSSSEEEEEEEEEEESSSTTEEESTTSEEEEEESSSEEEEEEBSSSEEEEEESSTTTEEEETTSEEEEE
T ss_pred CEEECCCCccEEEecceeEEEECCCCEEEcCceEEEEEcCccceEEECCCCEEEEEEEECCCCEECCCCEEEEC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999986
No 104
>KOG0399|consensus
Probab=99.72 E-value=4.7e-17 Score=184.96 Aligned_cols=280 Identities=21% Similarity=0.280 Sum_probs=176.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
-++|.|||+|||||+||-.|-+.|+.|+++||. ++.||.. .||++.-
T Consensus 1785 g~~vaiigsgpaglaaadqlnk~gh~v~vyer~------dr~ggll--------------------------~ygipnm- 1831 (2142)
T KOG0399|consen 1785 GKRVAIIGSGPAGLAAADQLNKAGHTVTVYERS------DRVGGLL--------------------------MYGIPNM- 1831 (2142)
T ss_pred CcEEEEEccCchhhhHHHHHhhcCcEEEEEEec------CCcCcee--------------------------eecCCcc-
Confidence 478999999999999999999999999999998 7888854 3344321
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p 548 (866)
..|-. ..++ -..++.+.||+++.++..-. .+.+ ++..-.+|.+|+|+||. |+.+|
T Consensus 1832 -kldk~-vv~r-----------rv~ll~~egi~f~tn~eigk--------~vs~---d~l~~~~daiv~a~gst~prdlp 1887 (2142)
T KOG0399|consen 1832 -KLDKF-VVQR-----------RVDLLEQEGIRFVTNTEIGK--------HVSL---DELKKENDAIVLATGSTTPRDLP 1887 (2142)
T ss_pred -chhHH-HHHH-----------HHHHHHhhCceEEeeccccc--------cccH---HHHhhccCeEEEEeCCCCCcCCC
Confidence 11111 1111 13467788999998775432 1222 33455799999999986 77666
Q ss_pred CCcCCCceEecch---------------hhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEE-EEecCCc--------
Q psy9583 549 GVKFDENLILSNK---------------GALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVT-ILEMSSN-------- 604 (866)
Q Consensus 549 ~~~~~~~~~~t~~---------------~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vt-li~~~~~-------- 604 (866)
.++.+...+.-.. +...+...+|+|+|||||.+|-++...-.++|++-. -++--+.
T Consensus 1888 v~grd~kgv~fame~l~~ntk~lld~~~d~~~~~~~gkkvivigggdtg~dcigtsvrhg~~sv~n~ellp~pp~~ra~~ 1967 (2142)
T KOG0399|consen 1888 VPGRDLKGVHFAMEFLEKNTKSLLDSVLDGNYISAKGKKVIVIGGGDTGTDCIGTSVRHGCKSVGNFELLPQPPPERAPD 1967 (2142)
T ss_pred CCCccccccHHHHHHHHHhHHhhhccccccceeccCCCeEEEECCCCccccccccchhhccceecceeecCCCCcccCCC
Confidence 6554333222111 122223457999999999999999888888887632 2221111
Q ss_pred -CCCccc----HHHH-HHHHHHHHHcCCEEEe------------CceEE-------EEEEcCCeEEEEEeeCCCCcccee
Q psy9583 605 -FLNTVD----EEIA-KKAFHLLNKQGLNIIL------------NTKIH-------DIKINKENVLINYSNKSTNVKTEI 659 (866)
Q Consensus 605 -~l~~~d----~~~~-~~l~~~l~~~GV~i~~------------~~~v~-------~i~~~~~~~~v~~~~~~g~~~~~~ 659 (866)
..|.++ -+.. ..+.+ ..|-..++ +..|+ +++.++.+.+...+- .+ ..
T Consensus 1968 npwpqwprvfrvdygh~e~~~---~~g~dpr~y~vltk~f~~~~~g~v~gl~~vrvew~k~~~g~w~~~ei-~~----se 2039 (2142)
T KOG0399|consen 1968 NPWPQWPRVFRVDYGHAEAKE---HYGSDPRTYSVLTKRFIGDDNGNVTGLETVRVEWEKDDKGRWQMKEI-NN----SE 2039 (2142)
T ss_pred CCCccCceEEEeecchHHHHH---HhCCCcceeeeeeeeeeccCCCceeeEEEEEEEEEecCCCceEEEEc-CC----cc
Confidence 112111 0111 11111 11221111 11111 122232222211111 11 13
Q ss_pred EEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEe-CCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHH
Q psy9583 660 ITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIV-NDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHI 735 (866)
Q Consensus 660 ~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~V-d~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i 735 (866)
+.++||+|++|.|+...-... .++.+++.|+++.|.. ++.+.|++++|||+|||-.+..+...|+.+||-+|+.+
T Consensus 2040 e~~eadlv~lamgf~gpe~~~-~~~~~~~~d~rsni~t~~~~y~t~v~~vfaagdcrrgqslvvwai~egrq~a~~v 2115 (2142)
T KOG0399|consen 2040 EIIEADLVILAMGFVGPEKSV-IEQLNLKTDPRSNILTPKDSYSTDVAKVFAAGDCRRGQSLVVWAIQEGRQAARQV 2115 (2142)
T ss_pred eeeecceeeeeccccCcchhh-hhhcCcccCccccccCCCccccccccceeecccccCCceEEEEEehhhhHHHHHH
Confidence 579999999999986433332 6788899998887775 45688999999999999988888899999999999876
No 105
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=99.71 E-value=3.5e-17 Score=166.82 Aligned_cols=192 Identities=16% Similarity=0.190 Sum_probs=106.0
Q ss_pred eeecCCccHHHHHHHHHHCCCe-EEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccccc
Q psy9583 394 IVIGAGPGGYVASIRLAQLGFK-TACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNVTL 472 (866)
Q Consensus 394 vIIGgG~AGl~aA~~L~~~g~~-V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~ 472 (866)
+||||||+|+++|.+|.+.|.+ ++|||++ +.+||.|......+.. .....+ ...++++. ...+
T Consensus 1 ~IIGaG~aGl~~a~~l~~~g~~~v~v~e~~------~~~Gg~w~~~~~~~~~---~~~~~~------~~~~~~~~-~~~~ 64 (203)
T PF13738_consen 1 VIIGAGPAGLAAAAHLLERGIDPVVVLERN------DRPGGVWRRYYSYTRL---HSPSFF------SSDFGLPD-FESF 64 (203)
T ss_dssp EEE--SHHHHHHHHHHHHTT---EEEEESS------SSSTTHHHCH-TTTT----BSSSCC------TGGSS--C-CCHS
T ss_pred CEECcCHHHHHHHHHHHhCCCCcEEEEeCC------CCCCCeeEEeCCCCcc---ccCccc------cccccCCc-cccc
Confidence 6999999999999999999999 9999998 7899998643211100 000000 00000000 0000
Q ss_pred CHHHHHHHH----HHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCC--CCc
Q psy9583 473 NLQKMLERK----NNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGS--KAR 545 (866)
Q Consensus 473 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs--~p~ 545 (866)
.+....... ....+.+.+.++.+.++.++++..++.+. +.. ....+.|+..+++++.+|+||+|||. .|.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~v~~yl~~~~~~~~l~i~~~~~V~~v~~---~~~~w~v~~~~~~~~~a~~VVlAtG~~~~p~ 141 (203)
T PF13738_consen 65 SFDDSPEWRWPHDFPSGEEVLDYLQEYAERFGLEIRFNTRVESVRR---DGDGWTVTTRDGRTIRADRVVLATGHYSHPR 141 (203)
T ss_dssp CHHHHHHHHHSBSSEBHHHHHHHHHHHHHHTTGGEETS--EEEEEE---ETTTEEEEETTS-EEEEEEEEE---SSCSB-
T ss_pred ccccCCCCCCCcccCCHHHHHHHHHHHHhhcCcccccCCEEEEEEE---eccEEEEEEEecceeeeeeEEEeeeccCCCC
Confidence 011000000 00011223345667788888887777666 332 22336666666778999999999996 566
Q ss_pred CCCCCc-CCCceEecchhhhccc-cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 546 SFPGVK-FDENLILSNKGALEMI-NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 546 ~~p~~~-~~~~~~~t~~~~~~~~-~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
.|+..+ ... ..+++.++.+.. ..+++|+|||+|.+|++++..|.+.|.+|+++.|++.+
T Consensus 142 ~p~~~g~~~~-~~~h~~~~~~~~~~~~k~V~VVG~G~SA~d~a~~l~~~g~~V~~~~R~~~~ 202 (203)
T PF13738_consen 142 IPDIPGSAFR-PIIHSADWRDPEDFKGKRVVVVGGGNSAVDIAYALAKAGKSVTLVTRSPIW 202 (203)
T ss_dssp --S-TTGGCS-EEEEGGG-STTGGCTTSEEEEE--SHHHHHHHHHHTTTCSEEEEEESS---
T ss_pred cccccccccc-ceEehhhcCChhhcCCCcEEEEcChHHHHHHHHHHHhhCCEEEEEecCCCC
Confidence 554443 223 455555554433 35799999999999999999999999999999998753
No 106
>KOG2755|consensus
Probab=99.70 E-value=3.4e-16 Score=153.74 Aligned_cols=264 Identities=19% Similarity=0.217 Sum_probs=160.3
Q ss_pred eeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 393 VIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 393 VvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+|||||.||.+||..|+.+ ..+++|+... + +......+..+..++++|.+....
T Consensus 2 fivvgggiagvscaeqla~~~psa~illitas------s----------------~vksvtn~~~i~~ylekfdv~eq~- 58 (334)
T KOG2755|consen 2 FIVVGGGIAGVSCAEQLAQLEPSAEILLITAS------S----------------FVKSVTNYQKIGQYLEKFDVKEQN- 58 (334)
T ss_pred eEEEcCccccccHHHHHHhhCCCCcEEEEecc------H----------------HHHHHhhHHHHHHHHHhcCccccc-
Confidence 68999999999999999987 4679999764 1 222333444454545666554321
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGV 550 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~~ 550 (866)
-..+....+.+++ + .+. .+...+. +++.+|..+.|++|++|||++|...-..
T Consensus 59 ---~~elg~~f~~~~~-----------~---------v~~---~~s~ehc--i~t~~g~~~ky~kKOG~tg~kPklq~E~ 110 (334)
T KOG2755|consen 59 ---CHELGPDFRRFLN-----------D---------VVT---WDSSEHC--IHTQNGEKLKYFKLCLCTGYKPKLQVEG 110 (334)
T ss_pred ---hhhhcccHHHHHH-----------h---------hhh---hccccce--EEecCCceeeEEEEEEecCCCcceeecC
Confidence 1111111111111 1 011 1112233 3446788999999999999999754221
Q ss_pred cCCCceEe---c--chhhhc-cccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHHHHHHH
Q psy9583 551 KFDENLIL---S--NKGALE-MINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAFHLLNK 623 (866)
Q Consensus 551 ~~~~~~~~---t--~~~~~~-~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~~~l~~ 623 (866)
-...++ + +.+.+. .....|.|.|+|.|-+++|++..+. +.+|+|....+.+.. .+||.+.+.+...|..
T Consensus 111 --~n~~Iv~irDtDsaQllq~kl~kaK~VlilgnGgia~El~yElk--~~nv~w~ikd~~IsaTFfdpGaaef~~i~l~a 186 (334)
T KOG2755|consen 111 --INPKIVGIRDTDSAQLLQCKLVKAKIVLILGNGGIAMELTYELK--ILNVTWKIKDEGISATFFDPGAAEFYDINLRA 186 (334)
T ss_pred --CCceEEEEecCcHHHHHHHHHhhcceEEEEecCchhHHHHHHhh--cceeEEEecchhhhhcccCccHHHHhHhhhhc
Confidence 122232 2 222221 2245899999999999999988776 568999988888875 4577777777665521
Q ss_pred cC------------CEEEeCc-----------------------------------eEEEEEEcCCeEEEEEeeCCCCcc
Q psy9583 624 QG------------LNIILNT-----------------------------------KIHDIKINKENVLINYSNKSTNVK 656 (866)
Q Consensus 624 ~G------------V~i~~~~-----------------------------------~v~~i~~~~~~~~v~~~~~~g~~~ 656 (866)
.+ ++...++ .+..+....+...+... ....
T Consensus 187 ~~s~~~iaiKh~q~iea~pk~~~n~vg~algpDw~s~~dl~g~~eseer~l~~l~~~~~~~~d~~d~~sv~~~---~~ek 263 (334)
T KOG2755|consen 187 DRSTRIIAIKHFQYIEAFPKCEENNVGPALGPDWHSQIDLQGISESENRSLTYLRNCVITSTDTSDNLSVHYM---DKEK 263 (334)
T ss_pred ccccchhhhhhhhhhhhcCcccccCcccccCcchhhhcccccchhhhhhhhHHhhhheeeeccchhhcccccc---cccc
Confidence 11 1000000 00000000000011110 0011
Q ss_pred ceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCC
Q psy9583 657 TEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVR 716 (866)
Q Consensus 657 ~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~ 716 (866)
+....+.+|.++.|+|..||.++ .-...+...++|.+.||+.|+|+.|++||+||++.
T Consensus 264 ~~~~qlt~d~ivSatgvtpn~e~--~~~~~lq~~edggikvdd~m~tslpdvFa~gDvct 321 (334)
T KOG2755|consen 264 MADNQLTCDFIVSATGVTPNSEW--AMNKMLQITEDGGIKVDDAMETSLPDVFAAGDVCT 321 (334)
T ss_pred cccceeeeeEEEeccccCcCceE--EecChhhhccccCeeehhhccccccceeeecceec
Confidence 12346789999999999999996 34445677778899999999999999999999985
No 107
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.70 E-value=3.4e-15 Score=157.15 Aligned_cols=331 Identities=15% Similarity=0.192 Sum_probs=200.1
Q ss_pred cccccceeeecCCccHHHHHHHHHHCC-CeEEEEeccCCCcccccCC----Cccceec--------cccchhHHHhhHHH
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEWKDNEENFALG----GTCTNVG--------CIPSKALLQTSHSF 453 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~~~~~~~~~G----G~~~~~g--------~~P~~~~~~~~~~~ 453 (866)
|++.+|++.||-||+-|+.|..|.+.+ .++..+||. |.++++.| |+.+..- ..|...+.+...
T Consensus 2 ~~~~~DliGIG~GPfNL~LA~ll~e~~~~~~lFLerk--p~F~WHpGmllegstlQv~FlkDLVTl~~PTs~ySFLNY-- 77 (436)
T COG3486 2 MAEVLDLIGIGIGPFNLSLAALLEEHSGLKSLFLERK--PDFSWHPGMLLEGSTLQVPFLKDLVTLVDPTSPYSFLNY-- 77 (436)
T ss_pred CCcceeeEEEccCchHHHHHHHhccccCcceEEEecC--CCCCcCCCcccCCccccccchhhhccccCCCCchHHHHH--
Confidence 556799999999999999999999885 889999997 44555554 2211111 012211111110
Q ss_pred HHHhhhhhhcCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcc-cEEEEEcCCceEE
Q psy9583 454 ENVKNSFFEYGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNF-HEIQIINKTKETI 531 (866)
Q Consensus 454 ~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~-~~v~v~~~~g~~i 531 (866)
+.+.+--. ..+.+..+...+.++ . .+..|....--.+.+++.+. +..++.+. ....+.+.++..+
T Consensus 78 ------L~~h~RLy--~Fl~~e~f~i~R~Ey----~-dY~~Waa~~l~~~rfg~~V~~i~~~~~d~~~~~~~~t~~~~~y 144 (436)
T COG3486 78 ------LHEHGRLY--EFLNYETFHIPRREY----N-DYCQWAASQLPSLRFGEEVTDISSLDGDAVVRLFVVTANGTVY 144 (436)
T ss_pred ------HHHcchHh--hhhhhhcccccHHHH----H-HHHHHHHhhCCccccCCeeccccccCCcceeEEEEEcCCCcEE
Confidence 11111000 000111111111111 1 12222322224455666555 22222222 2233455566789
Q ss_pred EecEEEEecCCCCcCCCCC-cCCCceEecchhhhcccc---CCCeEEEECCcHHHHHHHHHHHhc----CCcEEEEecCC
Q psy9583 532 TAKYIIIATGSKARSFPGV-KFDENLILSNKGALEMIN---VPKKLCIIGAGVIGLEIGSIWRRL----GSEVTILEMSS 603 (866)
Q Consensus 532 ~~d~lViATGs~p~~~p~~-~~~~~~~~t~~~~~~~~~---~~~~vvVIGgG~~glE~A~~l~~~----g~~Vtli~~~~ 603 (866)
.++.||+++|.+|+.||.. +..+..++++.++.+... ..++|+|||+|.+|.|+-..|... ..++.|+.|+.
T Consensus 145 ~ar~lVlg~G~~P~IP~~f~~l~~~~vfHss~~~~~~~~~~~~~~V~ViG~GQSAAEi~~~Ll~~~~~~~~~l~witR~~ 224 (436)
T COG3486 145 RARNLVLGVGTQPYIPPCFRSLIGERVFHSSEYLERHPELLQKRSVTVIGSGQSAAEIFLDLLNSQPPQDYQLNWITRSS 224 (436)
T ss_pred EeeeEEEccCCCcCCChHHhCcCccceeehHHHHHhhHHhhcCceEEEEcCCccHHHHHHHHHhCCCCcCccceeeeccC
Confidence 9999999999999988755 344556777666654432 234599999999999998777653 34588999998
Q ss_pred cCCCc---------ccHHHHHHH------------------------------HHHHH-------HcCCEEEeCceEEEE
Q psy9583 604 NFLNT---------VDEEIAKKA------------------------------FHLLN-------KQGLNIILNTKIHDI 637 (866)
Q Consensus 604 ~~l~~---------~d~~~~~~l------------------------------~~~l~-------~~GV~i~~~~~v~~i 637 (866)
.+++. |.|+..+++ .+.|- +..+.++.++.+..+
T Consensus 225 gf~p~d~Skf~~e~F~P~y~dyfy~l~~~~r~~ll~~~~~~YkgI~~~ti~~Iy~~lY~~~l~~~~~~v~l~~~~ev~~~ 304 (436)
T COG3486 225 GFLPMDYSKFGLEYFSPEYTDYFYGLPPEARDELLRKQRLLYKGISFDTIEEIYDLLYEQSLGGRKPDVRLLSLSEVQSV 304 (436)
T ss_pred CCCccccchhhhhhcCchhHHHHhcCCHHHHHHHHhhcCccccccCHHHHHHHHHHHHHHHhcCCCCCeeeccccceeee
Confidence 87652 233332222 11111 235788899999999
Q ss_pred EEcCCe-EEEEEeeC-CCCccceeEEEeccEEEEeeccccCCC-CCCccccCeeecCCCcEEeCCCCCCC-----CCCEE
Q psy9583 638 KINKEN-VLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTN-NLNIDKIGLKVNENNFIIVNDNCETN-----IPNIY 709 (866)
Q Consensus 638 ~~~~~~-~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~-~l~l~~~gl~~~~~G~i~Vd~~l~Ts-----~~~Vy 709 (866)
+..+++ +.+.+... .++ ..+++.|.||+|||++...+ +|..-.-.+.++++|...|++.++.. .-.||
T Consensus 305 ~~~G~g~~~l~~~~~~~~~----~~t~~~D~vIlATGY~~~~P~fL~~l~d~l~~d~~g~l~I~~dY~v~~~~~~~~~if 380 (436)
T COG3486 305 EPAGDGRYRLTLRHHETGE----LETVETDAVILATGYRRAVPSFLEGLADRLQWDDDGRLVIGRDYRVLWDGPGKGRIF 380 (436)
T ss_pred ecCCCceEEEEEeeccCCC----ceEEEeeEEEEecccccCCchhhhhHHHhhcccccCCeEecCceeeecCCCCcceEE
Confidence 988866 66666542 233 56889999999999996555 43211123677889999999877542 23699
Q ss_pred EecccCC-----CCCcHHHHHHHHHHHHHHHhCCC
Q psy9583 710 AIGDVVR-----GPMLAHKAEEEGIMVAEHISGQK 739 (866)
Q Consensus 710 A~GD~a~-----~~~~~~~A~~~g~~aa~~i~g~~ 739 (866)
+.|-+.. .|.+.-.|++.+.++ +.++|..
T Consensus 381 vqn~e~htHGig~pdLsl~a~Raa~I~-~~L~g~~ 414 (436)
T COG3486 381 VQNAELHTHGIGAPDLSLGAWRAAVIL-NSLLGRE 414 (436)
T ss_pred EecccccccccCCccchHHHHHHHHHH-HHHhCcC
Confidence 9998764 356677777776654 5566653
No 108
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B.
Probab=99.70 E-value=3.6e-16 Score=170.35 Aligned_cols=262 Identities=18% Similarity=0.245 Sum_probs=141.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCC-CeEEEEeccCCCcccccCC----CccceeccccchhHHHhhHHHHHHhhhhhhcC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEWKDNEENFALG----GTCTNVGCIPSKALLQTSHSFENVKNSFFEYG 464 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~~~~~~~~~G----G~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~g 464 (866)
.||+++||.||++|+.|..|.+.+ .++..+|+.+ ...+..| |+-.....+.. +..+.
T Consensus 2 ~~D~igIG~GP~nLslA~~l~~~~~~~~~f~e~~~--~f~Wh~gmll~~~~~q~~fl~D----------------lvt~~ 63 (341)
T PF13434_consen 2 IYDLIGIGFGPFNLSLAALLEEHGDLKALFLERRP--SFSWHPGMLLPGARMQVSFLKD----------------LVTLR 63 (341)
T ss_dssp EESEEEE--SHHHHHHHHHHHHHH---EEEEES-S--S--TTGGG--SS-B-SS-TTSS----------------SSTTT
T ss_pred ceeEEEEeeCHHHHHHHHHhhhcCCCCEEEEecCC--CCCcCCccCCCCCccccccccc----------------cCcCc
Confidence 489999999999999999999886 8999999873 2222222 21111110000 00000
Q ss_pred ccccccccCHHHHHHHHHHH------------HHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCc-ccEEEEEc----C
Q psy9583 465 INTQNVTLNLQKMLERKNNI------------IKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNN-FHEIQIIN----K 526 (866)
Q Consensus 465 i~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~-~~~v~v~~----~ 526 (866)
-+ ...+.|-.++....+. ...+.+.+.+..++..-.+.++..|. +...... ...+.|.+ .
T Consensus 64 ~P--~s~~sflnYL~~~~rl~~f~~~~~~~p~R~ef~dYl~Wva~~~~~~v~~~~~V~~I~~~~~~~~~~~~V~~~~~~g 141 (341)
T PF13434_consen 64 DP--TSPFSFLNYLHEHGRLYEFYNRGYFFPSRREFNDYLRWVAEQLDNQVRYGSEVTSIEPDDDGDEDLFRVTTRDSDG 141 (341)
T ss_dssp -T--TSTTSHHHHHHHTT-HHHHHHH--SS-BHHHHHHHHHHHHCCGTTTEEESEEEEEEEEEEETTEEEEEEEEEETTS
T ss_pred CC--CCcccHHHHHHHcCChhhhhhcCCCCCCHHHHHHHHHHHHHhCCCceEECCEEEEEEEecCCCccEEEEEEeecCC
Confidence 00 0111222111111111 11222334444555565477777766 4332111 13466654 2
Q ss_pred CceEEEecEEEEecCCCCcCCCCCc-CC-CceEecchhhhccc---cCCCeEEEECCcHHHHHHHHHHHhcCC--cEEEE
Q psy9583 527 TKETITAKYIIIATGSKARSFPGVK-FD-ENLILSNKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGS--EVTIL 599 (866)
Q Consensus 527 ~g~~i~~d~lViATGs~p~~~p~~~-~~-~~~~~t~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~--~Vtli 599 (866)
++..+.+++||+|||..|..|+... .. ...++++.++.... ...++|+|||||.+|.|++..|.+.+. +|+++
T Consensus 142 ~~~~~~ar~vVla~G~~P~iP~~~~~~~~~~~v~Hss~~~~~~~~~~~~~~V~VVGgGQSAAEi~~~L~~~~~~~~V~~i 221 (341)
T PF13434_consen 142 DGETYRARNVVLATGGQPRIPEWFQDLPGSPRVFHSSEYLSRIDQSLAGKRVAVVGGGQSAAEIFLDLLRRGPEAKVTWI 221 (341)
T ss_dssp -EEEEEESEEEE----EE---GGGGGGTT-TTEEEGGGHHHHHT-----EEEEEE-SSHHHHHHHHHHHHH-TTEEEEEE
T ss_pred CeeEEEeCeEEECcCCCCCCCcchhhcCCCCCEEEehHhhhccccccCCCeEEEECCcHhHHHHHHHHHhCCCCcEEEEE
Confidence 3478999999999999998876554 22 35677666655443 467899999999999999999998875 89999
Q ss_pred ecCCcCCCc---------ccHH-------------------------------HHHHHHHHH------HHcCCEEEeCce
Q psy9583 600 EMSSNFLNT---------VDEE-------------------------------IAKKAFHLL------NKQGLNIILNTK 633 (866)
Q Consensus 600 ~~~~~~l~~---------~d~~-------------------------------~~~~l~~~l------~~~GV~i~~~~~ 633 (866)
.|++.+.+. ++|+ +.+.+.+.+ .+..+.++.++.
T Consensus 222 ~R~~~~~~~d~s~f~ne~f~P~~v~~f~~l~~~~R~~~l~~~~~~ny~~i~~~~l~~iy~~lY~~~v~g~~~~~l~~~~~ 301 (341)
T PF13434_consen 222 SRSPGFFPMDDSPFVNEIFSPEYVDYFYSLPDEERRELLREQRHTNYGGIDPDLLEAIYDRLYEQRVSGRGRLRLLPNTE 301 (341)
T ss_dssp ESSSS-EB----CCHHGGGSHHHHHHHHTS-HHHHHHHHHHTGGGTSSEB-HHHHHHHHHHHHHHHHHT---SEEETTEE
T ss_pred ECCCccCCCccccchhhhcCchhhhhhhcCCHHHHHHHHHHhHhhcCCCCCHHHHHHHHHHHHHHHhcCCCCeEEeCCCE
Confidence 998876432 2232 222222222 123478999999
Q ss_pred EEEEEEcC-CeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 634 IHDIKINK-ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 634 v~~i~~~~-~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
|+.++..+ +++.+.+.+... ++..++++|.||+|||++
T Consensus 302 v~~~~~~~~~~~~l~~~~~~~---~~~~~~~~D~VilATGy~ 340 (341)
T PF13434_consen 302 VTSAEQDGDGGVRLTLRHRQT---GEEETLEVDAVILATGYR 340 (341)
T ss_dssp EEEEEEES-SSEEEEEEETTT-----EEEEEESEEEE---EE
T ss_pred EEEEEECCCCEEEEEEEECCC---CCeEEEecCEEEEcCCcc
Confidence 99999888 488888875221 235689999999999985
No 109
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.69 E-value=1.3e-16 Score=178.87 Aligned_cols=120 Identities=21% Similarity=0.451 Sum_probs=102.2
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
..+|+||++|++|+||+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++.+++|+.|++|++|+.++....
T Consensus 2 ~~~~~~p~~~~~~~~g~~~~~~~~~g~~v~~~~~~~~~e~~k~~~~~~a~~~g~~~~~~~~~g~~v~~g~~l~~i~~~~~ 81 (371)
T PRK14875 2 ITPITMPKWGLSMTEGKVAGWLVQEGDEVEKGDELLDVETDKITNEVEAPAAGTLRRQVAQEGETLPVGALLAVVADAEV 81 (371)
T ss_pred ceEEeCCCCCCCCceEEEEEEEcCCCCEeCCCCEEEEEEecceeEEEecCCCeEEEEEEcCCCCEeCCCCEEEEEecCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999975432
Q ss_pred cccccccccccccccccccccchhHHHhhhhCCCCcccccCCCCCCCceeehhH
Q psy9583 83 KLSSKTEIKNKKDIKNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDV 136 (866)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv 136 (866)
.. +.....++|.+++++++ ++++... .+++..+++...++
T Consensus 82 ~~------------~~~~~~~~p~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~i 121 (371)
T PRK14875 82 SD------------AEIDAFIAPFARRFAPE-GIDEEDA-GPAPRKARIGGRTV 121 (371)
T ss_pred Cc------------ccccccccchhhhcccc-ccchhhc-cCCCCcceEcCcEE
Confidence 10 11123578999999888 8998888 67777666544443
No 110
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated
Probab=99.69 E-value=2.3e-15 Score=167.63 Aligned_cols=158 Identities=16% Similarity=0.208 Sum_probs=122.1
Q ss_pred EEEECCcHHHHHHH-HHHH----hcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEE
Q psy9583 573 LCIIGAGVIGLEIG-SIWR----RLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLIN 647 (866)
Q Consensus 573 vvVIGgG~~glE~A-~~l~----~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~ 647 (866)
=+|++.+.+|+|++ ..+. ++|++|+++.+.+..++.+ ++.+.+.+.+++.|+++++++.|.+++.+++++...
T Consensus 218 ~~V~~PavIGle~a~~v~~~L~~~LG~~V~~vp~~ppslpG~--rL~~aL~~~l~~~Gv~I~~g~~V~~v~~~~~~V~~v 295 (422)
T PRK05329 218 EAVLLPAVLGLDDDAAVLAELEEALGCPVFELPTLPPSVPGL--RLQNALRRAFERLGGRIMPGDEVLGAEFEGGRVTAV 295 (422)
T ss_pred CEEEECceecCCChHHHHHHHHHHHCCCEEEeCCCCCCCchH--HHHHHHHHHHHhCCCEEEeCCEEEEEEEeCCEEEEE
Confidence 36889999999998 7775 4699999999999988865 688889999999999999999999998776665544
Q ss_pred EeeCCCCccceeEEEeccEEEEeeccccCCCCC---------------------------------CccccCeeecCCCc
Q psy9583 648 YSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNL---------------------------------NIDKIGLKVNENNF 694 (866)
Q Consensus 648 ~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l---------------------------------~l~~~gl~~~~~G~ 694 (866)
.. .++. ...+.+|.||+|+|+.+...+. ++...|+.+|++ .
T Consensus 296 ~~-~~g~----~~~i~AD~VVLAtGrf~s~GL~a~~~~i~Epif~l~v~~~~~r~~w~~~~~~~~~p~~~~GV~~d~~-~ 369 (422)
T PRK05329 296 WT-RNHG----DIPLRARHFVLATGSFFSGGLVAERDGIREPIFGLDVLQPADRADWYQRDFFAPHPFLQFGVATDAT-L 369 (422)
T ss_pred Ee-eCCc----eEEEECCEEEEeCCCcccCceeccCCccccccCCCCCCCCCchhhhhhhhhccCCchhhcCceECCC-c
Confidence 43 2333 3478999999999987665431 123445555533 3
Q ss_pred EEeCCCCCCCCCCEEEecccCCCCCcH------HHHHHHHHHHHHHHhCC
Q psy9583 695 IIVNDNCETNIPNIYAIGDVVRGPMLA------HKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 695 i~Vd~~l~Ts~~~VyA~GD~a~~~~~~------~~A~~~g~~aa~~i~g~ 738 (866)
..+|...++..+||||+|++.+++..+ -.|+..|..||++|+..
T Consensus 370 ~p~~~~g~~~~~nl~a~G~vl~g~d~~~~~~g~Gva~~ta~~a~~~~~~~ 419 (422)
T PRK05329 370 RPLDSQGGPVIENLYAAGAVLGGYDPIREGCGSGVALATALHAAEQIAEE 419 (422)
T ss_pred CcccCCCCeeccceEEeeehhcCCchHHhCCCchhHHHHHHHHHHHHHHh
Confidence 455666667799999999999988655 47899999999998743
No 111
>PRK06748 hypothetical protein; Validated
Probab=99.65 E-value=7.8e-16 Score=127.58 Aligned_cols=64 Identities=22% Similarity=0.330 Sum_probs=61.6
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEe-cceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIET-DKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~-~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
.|+|.+|++++||.|++||+|++||| ||++.+|+||.+|+|.++++++|+.|++|++|+.++.+
T Consensus 12 ~G~I~~w~vk~GD~V~~gd~l~~IETMdK~~~ei~Ap~~G~v~~i~v~~Gd~V~vG~~la~I~~~ 76 (83)
T PRK06748 12 YGKVEKLFVRESSYVYEWEKLALIETIDKQKVEIKVGISGYIESLEVVEGQAIADQKLLITVRDD 76 (83)
T ss_pred cEEEEEEEeCCCCEECCCCEEEEEEcCCCceEEEecCCCEEEEEEEeCCCCEECCCCEEEEEECC
Confidence 49999999999999999999999999 99999999999999999999999999999999999743
No 112
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=99.64 E-value=9.3e-16 Score=173.36 Aligned_cols=194 Identities=20% Similarity=0.235 Sum_probs=119.0
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCe-EEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~-V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
..++||+|||||++|+++|.+|++.|.. ++|+||+ ...||+|.+. +.|+..+....... . +..+-.+
T Consensus 6 ~~~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~------~~~Gg~W~~~-ry~~l~~~~p~~~~-~----~~~~p~~ 73 (443)
T COG2072 6 ATHTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKR------DDVGGTWRYN-RYPGLRLDSPKWLL-G----FPFLPFR 73 (443)
T ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCCcEEEEEcc------CCcCCcchhc-cCCceEECCchhee-c----cCCCccC
Confidence 3469999999999999999999999988 9999998 7899997442 22211111111110 0 0000000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcE----EEEeEEEEeccccCcccEEEEEcCCceE--EEecEEEEec
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIK----FFHGHAIFTGKIQNNFHEIQIINKTKET--ITAKYIIIAT 540 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~----v~~g~~v~~~~~~~~~~~v~v~~~~g~~--i~~d~lViAT 540 (866)
.......+.... +.+...++++++. +.....+. + .+.+...++|..+++.. +.+|.||+||
T Consensus 74 ~~~~~~~~~~~~-----------~y~~~~~~~y~~~~~i~~~~~v~~~-~-~~~~~~~w~V~~~~~~~~~~~a~~vV~AT 140 (443)
T COG2072 74 WDEAFAPFAEIK-----------DYIKDYLEKYGLRFQIRFNTRVEVA-D-WDEDTKRWTVTTSDGGTGELTADFVVVAT 140 (443)
T ss_pred CcccCCCcccHH-----------HHHHHHHHHcCceeEEEcccceEEE-E-ecCCCCeEEEEEcCCCeeeEecCEEEEee
Confidence 000111111111 1233445555443 33333332 1 23344566666555533 6799999999
Q ss_pred CC--CCcCCCCCcCC--CceEecchhhhc-cccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC
Q psy9583 541 GS--KARSFPGVKFD--ENLILSNKGALE-MINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL 606 (866)
Q Consensus 541 Gs--~p~~~p~~~~~--~~~~~t~~~~~~-~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l 606 (866)
|. .|+.|+..+.+ ....+++.+..+ ..-.+|+|+|||+|.+|++++..|.+.|.+|+++.|.+...
T Consensus 141 G~~~~P~iP~~~G~~~f~g~~~HS~~~~~~~~~~GKrV~VIG~GaSA~di~~~l~~~ga~vt~~qRs~~~~ 211 (443)
T COG2072 141 GHLSEPYIPDFAGLDEFKGRILHSADWPNPEDLRGKRVLVIGAGASAVDIAPELAEVGASVTLSQRSPPHI 211 (443)
T ss_pred cCCCCCCCCCCCCccCCCceEEchhcCCCccccCCCeEEEECCCccHHHHHHHHHhcCCeeEEEecCCCce
Confidence 95 46666544422 223444444443 34468999999999999999999999999999999988664
No 113
>KOG1399|consensus
Probab=99.60 E-value=4.4e-14 Score=157.12 Aligned_cols=304 Identities=17% Similarity=0.191 Sum_probs=165.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhh--cCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFE--YGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~--~gi~~ 467 (866)
..+|+|||||+|||.+|+.|.+.|++++++||. +.+||.|.+..... ...+..++.+..++.. ++.+.
T Consensus 6 ~~~vaIIGAG~sGL~~ar~l~~~g~~v~vfEr~------~~iGGlW~y~~~~~----~~~ss~Y~~l~tn~pKe~~~~~d 75 (448)
T KOG1399|consen 6 SKDVAVIGAGPAGLAAARELLREGHEVVVFERT------DDIGGLWKYTENVE----VVHSSVYKSLRTNLPKEMMGYSD 75 (448)
T ss_pred CCceEEECcchHHHHHHHHHHHCCCCceEEEec------CCccceEeecCccc----ccccchhhhhhccCChhhhcCCC
Confidence 489999999999999999999999999999998 79999997762211 0001112222111111 11111
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcE--EEEeEEEE-eccccCcccEEEEEcCCc--eEEEecEEEEecCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIK--FFHGHAIF-TGKIQNNFHEIQIINKTK--ETITAKYIIIATGS 542 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~--v~~g~~v~-~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs 542 (866)
.....+....+...+++. ..+..++++.++. +.+++.+. ++..+++.+.+......+ ...-||.|++|||-
T Consensus 76 fpf~~~~~~~~p~~~e~~----~YL~~yA~~F~l~~~i~f~~~v~~v~~~~~gkW~V~~~~~~~~~~~~ifd~VvVctGh 151 (448)
T KOG1399|consen 76 FPFPERDPRYFPSHREVL----EYLRDYAKHFDLLKMINFNTEVVRVDSIDKGKWRVTTKDNGTQIEEEIFDAVVVCTGH 151 (448)
T ss_pred CCCcccCcccCCCHHHHH----HHHHHHHHhcChhhheEecccEEEEeeccCCceeEEEecCCcceeEEEeeEEEEcccC
Confidence 111111111111112222 2345556666653 33333332 333222234444443332 57889999999997
Q ss_pred C--CcCCCCCc----CCCceEecchhhhccc-cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHH
Q psy9583 543 K--ARSFPGVK----FDENLILSNKGALEMI-NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAK 615 (866)
Q Consensus 543 ~--p~~~p~~~----~~~~~~~t~~~~~~~~-~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~ 615 (866)
. |+.|...+ .-.-.++++.+..... ..+|+|+|||.|.+|+|++..+++...+|++..+ ........
T Consensus 152 ~~~P~~P~~~g~~~~~f~G~~iHS~~Yk~~e~f~~k~VlVIG~g~SG~DIs~d~~~~ak~v~~~~~-~~~~~~~~----- 225 (448)
T KOG1399|consen 152 YVEPRIPQIPGPGIESFKGKIIHSHDYKSPEKFRDKVVLVVGCGNSGMDISLDLLRVAKEVHLSVV-SPKVHVEP----- 225 (448)
T ss_pred cCCCCCCcCCCCchhhcCCcceehhhccCcccccCceEEEECCCccHHHHHHHHHHhccCcceeee-cccccccc-----
Confidence 7 65443222 2222455665555433 3579999999999999999999999999888765 20000000
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
...+ -.++..+. . +..+..++ ..+. .++. ...+|.+|+|||+.-...++ +..+ .+
T Consensus 226 --~~~~-~~~~~~~~-~-i~~~~e~~----~~~~-~~~~------~~~~D~ii~ctgy~y~fPfl--~~~~-------~~ 280 (448)
T KOG1399|consen 226 --PEIL-GENLWQVP-S-IKSFTEDG----SVFE-KGGP------VERVDRIIFCTGYKYKFPFL--ETLG-------LG 280 (448)
T ss_pred --ccee-ecceEEcc-c-cccccCcc----eEEE-cCce------eEEeeeEEEeeeeEeeccee--ccCC-------ce
Confidence 0000 01222221 1 44443322 1222 1443 78899999999998877774 3321 12
Q ss_pred EeCCCC-----CCCCCCEEEecccCCCC----CcHHHHHHHHHHHHHHHhCC
Q psy9583 696 IVNDNC-----ETNIPNIYAIGDVVRGP----MLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 696 ~Vd~~l-----~Ts~~~VyA~GD~a~~~----~~~~~A~~~g~~aa~~i~g~ 738 (866)
.+++.. ....|..++-|....+. ...+....|++.++.-+.|.
T Consensus 281 ~~~~~~~~pl~k~~~p~~~~~~~~~~~l~~~~~~f~~~e~Q~r~~~~v~~G~ 332 (448)
T KOG1399|consen 281 TVRDNIVGPLYKKVFPPALAPGLSLAGLPLIQIPFPMFELQARWVAAVLEGR 332 (448)
T ss_pred eeccCcccchheeccchhhCccccccccCeeeEeecceehhhhhhHhhhcCC
Confidence 222222 12234445555222111 23455667777777777765
No 114
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
Probab=99.59 E-value=9.6e-14 Score=147.81 Aligned_cols=200 Identities=18% Similarity=0.280 Sum_probs=125.6
Q ss_pred eEEEecEEEEecCCCCcCCCCCc---C-CCceEecchhhhccc----------------cCCCeEEEE---CCcH-----
Q psy9583 529 ETITAKYIIIATGSKARSFPGVK---F-DENLILSNKGALEMI----------------NVPKKLCII---GAGV----- 580 (866)
Q Consensus 529 ~~i~~d~lViATGs~p~~~p~~~---~-~~~~~~t~~~~~~~~----------------~~~~~vvVI---GgG~----- 580 (866)
-++..-.+|+|||-.++...-.. + .-..++|..++.++. ..||+|+.| |+-.
T Consensus 297 ve~~vGaIIvAtGy~~~Da~~k~EyGYG~~~nVIT~lElErml~~~GPT~GkvlrpSdg~~pKrVaFIqCVGSRD~~~~n 376 (622)
T COG1148 297 VELEVGAIIVATGYKPFDATRKEEYGYGKYPNVITNLELERMLNPNGPTGGKVLRPSDGKPPKRVAFIQCVGSRDFQVGN 376 (622)
T ss_pred EEEEeceEEEEccccccCcchhhhcCCCCCcchhhHHHHHHHhccCCCCCceEEecCCCCCCceEEEEEEecCcCcccCC
Confidence 36788899999998776432111 0 112344444433322 246888876 4422
Q ss_pred ---------HHHHHHHHHHhc--CCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc-CCeEEEEE
Q psy9583 581 ---------IGLEIGSIWRRL--GSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN-KENVLINY 648 (866)
Q Consensus 581 ---------~glE~A~~l~~~--g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~ 648 (866)
.++.-|+.+.++ ..+|++++..-+ .+....-+.+.+.-++.||+++.+. +.+|... ++.+.+..
T Consensus 377 ~YCSrvCCm~slKqA~~Ike~~Pd~~v~I~YmDiR---afG~~yEefY~~~Q~~~gV~fIRGr-vaei~e~p~~~l~V~~ 452 (622)
T COG1148 377 PYCSRVCCMVSLKQAQLIKERYPDTDVTIYYMDIR---AFGKDYEEFYVRSQEDYGVRFIRGR-VAEIAEFPKKKLIVRV 452 (622)
T ss_pred hhhHHHHHHHHHhhhhhhhhcCCCcceeEEEEEee---ccCccHHHHHHhhhhhhchhhhcCC-hHHheeCCCCeeEEEE
Confidence 122334444443 346787766433 2333333444444457899998654 4444443 44556666
Q ss_pred eeCCCCccceeEEEeccEEEEeeccccCCCCCC-ccccCeeecCCCcEEeC-CCCC---CCCCCEEEecccCCCCCcHHH
Q psy9583 649 SNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLN-IDKIGLKVNENNFIIVN-DNCE---TNIPNIYAIGDVVRGPMLAHK 723 (866)
Q Consensus 649 ~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~-l~~~gl~~~~~G~i~Vd-~~l~---Ts~~~VyA~GD~a~~~~~~~~ 723 (866)
++. +.+...++++|+|++++|..|....-. .+.+||+.+++|++.-. ..++ |+.+|||.+|-| .+|+-...
T Consensus 453 EdT---l~g~~~e~~~DLVVLa~Gmep~~g~~kia~iLgL~~~~~gF~k~~hPkl~pv~s~~~GIflAG~a-qgPkdI~~ 528 (622)
T COG1148 453 EDT---LTGEVKEIEADLVVLATGMEPSEGAKKIAKILGLSQDEDGFLKEAHPKLRPVDSNRDGIFLAGAA-QGPKDIAD 528 (622)
T ss_pred Eec---cCccceecccceEEEeeccccCcchHHHHHhcCcccCCCCccccCCCCcccccccCCcEEEeecc-cCCccHHH
Confidence 532 223456899999999999998554321 35678999999998876 5554 789999999954 48999999
Q ss_pred HHHHHHHHHHHHh
Q psy9583 724 AEEEGIMVAEHIS 736 (866)
Q Consensus 724 A~~~g~~aa~~i~ 736 (866)
++.||..||....
T Consensus 529 siaqa~aAA~kA~ 541 (622)
T COG1148 529 SIAQAKAAAAKAA 541 (622)
T ss_pred HHHHhHHHHHHHH
Confidence 9999998887654
No 115
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional
Probab=99.58 E-value=5.1e-14 Score=157.54 Aligned_cols=79 Identities=37% Similarity=0.603 Sum_probs=75.4
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC-EEecCCEEEEEecCCc
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS-IVTSNQVIALIDTDIS 82 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~-~v~~g~~l~~~~~~~~ 82 (866)
++|+||++|++|+||+|.+|+|++||.|++||+|++|||||++++++||.+|++.++++++|+ .|++|++|+.++.+++
T Consensus 3 ~ei~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~iETdKa~~ev~A~~~G~v~~i~v~~G~~~V~vG~~i~~i~~~~~ 82 (464)
T PRK11892 3 IEILMPALSPTMEEGTLAKWLKKEGDKVKSGDVIAEIETDKATMEVEAVDEGTLGKILVPEGTEGVKVNTPIAVLLEEGE 82 (464)
T ss_pred cceecCCCCCCcceeEEEEEEecCCCEecCCCeEEEEEecceeeeecCCCceEEEEEEecCCCcEeCCCCEEEEEccCCC
Confidence 589999999999999999999999999999999999999999999999999999999999995 7999999999976543
No 116
>PTZ00188 adrenodoxin reductase; Provisional
Probab=99.57 E-value=3.1e-13 Score=149.86 Aligned_cols=283 Identities=16% Similarity=0.163 Sum_probs=157.0
Q ss_pred ccceeeecCCccHHHHHHHHH-HCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLA-QLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~-~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
..+|+||||||||++||.+|. +.|++|+|||+. +.+||.+.+ |..|.+
T Consensus 39 ~krVAIVGaGPAGlyaA~~Ll~~~g~~VtlfEk~------p~pgGLvR~-GVaPdh------------------------ 87 (506)
T PTZ00188 39 PFKVGIIGAGPSALYCCKHLLKHERVKVDIFEKL------PNPYGLIRY-GVAPDH------------------------ 87 (506)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCeEEEEecC------CCCccEEEE-eCCCCC------------------------
Confidence 468999999999999999765 679999999998 677886542 222211
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
.....+. ..+...+...+++++.+..+..+ +.+ +...-.||.||+|||+.+..+|
T Consensus 88 ---~~~k~v~-----------~~f~~~~~~~~v~f~gnv~VG~D--------vt~---eeL~~~YDAVIlAtGA~~l~ip 142 (506)
T PTZ00188 88 ---IHVKNTY-----------KTFDPVFLSPNYRFFGNVHVGVD--------LKM---EELRNHYNCVIFCCGASEVSIP 142 (506)
T ss_pred ---ccHHHHH-----------HHHHHHHhhCCeEEEeeeEecCc--------cCH---HHHHhcCCEEEEEcCCCCCCCC
Confidence 0111111 11223344567776633222111 111 1122379999999999877666
Q ss_pred ------------CCcCC--CceEecchhhhcc-------------c------cCCCeEEEECCcHHHHHHHHHHH-----
Q psy9583 549 ------------GVKFD--ENLILSNKGALEM-------------I------NVPKKLCIIGAGVIGLEIGSIWR----- 590 (866)
Q Consensus 549 ------------~~~~~--~~~~~t~~~~~~~-------------~------~~~~~vvVIGgG~~glE~A~~l~----- 590 (866)
+.... ...+++..++..| . ...++++|||.|++++++|..|.
T Consensus 143 i~~~~~~~~~~GGe~~~~~l~Gvf~A~dfV~WYNg~p~~~~~~~~~ayL~p~~~~~~vvVIG~GNVAlDvARiL~~~~d~ 222 (506)
T PTZ00188 143 IGQQDEDKAVSGGETNPRKQNGIFHARDLIYFYNNMYNDVRCKAVDNYLNSFENFTTSIIIGNGNVSLDIARILIKSPDD 222 (506)
T ss_pred cccccceeeeccccccccccCcEEehheEEEeecCCCCccccccccccccccCCCCcEEEECCCchHHHHHHHHccCHHH
Confidence 33110 1223322222111 0 12468999999999999998753
Q ss_pred ---------------hcCC-cEEEEecCCcCCCcc------------------cH-H-----------------------
Q psy9583 591 ---------------RLGS-EVTILEMSSNFLNTV------------------DE-E----------------------- 612 (866)
Q Consensus 591 ---------------~~g~-~Vtli~~~~~~l~~~------------------d~-~----------------------- 612 (866)
+.+. +|+++.|+......| ++ +
T Consensus 223 L~~TDI~~~aL~~L~~s~v~~V~ivgRRGp~qaaFT~kElrEL~~l~~~~v~v~~~d~~~~~~~~~~~~~~r~~~r~~~~ 302 (506)
T PTZ00188 223 LSKTDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAELRELISLENTKVILSKKNYDLCCHLKSDEENTNMKKRQHEI 302 (506)
T ss_pred hhcCCCcHHHHHHHHhCCCcEEEEEEecCHHHhCCCHHHHHHHhcCCCCeEEEChhhhcccccccchhhhhhhhhhhhhH
Confidence 3232 588887764321110 00 0
Q ss_pred HHHHHHHHHH----------HcCCEEEeCceEEEEEEcCCeE-EEEEee-----CCCCccceeEEEeccEEEEeeccccC
Q psy9583 613 IAKKAFHLLN----------KQGLNIILNTKIHDIKINKENV-LINYSN-----KSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 613 ~~~~l~~~l~----------~~GV~i~~~~~v~~i~~~~~~~-~v~~~~-----~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
..+.+.+... .+-+.|++...+.+|...++.+ .+.+.. .....+++...+++|+|+-++|++..
T Consensus 303 ~~~~l~~~~~~~~~~~~~~~~r~i~l~F~~sP~ei~~~~~~v~~v~~~~n~l~~~~~~~tg~~~~~~~~lV~rsiGY~g~ 382 (506)
T PTZ00188 303 FQKMVKNYEEVEKNKEFYKTYKIIEFIFYFEIRQIRPIDGAMKNVELELNKNVPMSFSSFKENKVLVTPLVIFATGFKKS 382 (506)
T ss_pred HHHHHHHHHhhccCccCCCCceEEEEEccCCceEEECCCCcEeEEEEEEeecccCccCCCCeeEEEEcCEEEEcccccCC
Confidence 1112222221 1345677778888887522222 233331 11112345678999999999999865
Q ss_pred CCCCCccccCeeecCCCcEEeCCCCCC--CCCCEEEecccCCCCC-cHHHHHHHHHHHHHHHhC
Q psy9583 677 TNNLNIDKIGLKVNENNFIIVNDNCET--NIPNIYAIGDVVRGPM-LAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 677 ~~~l~l~~~gl~~~~~G~i~Vd~~l~T--s~~~VyA~GD~a~~~~-~~~~A~~~g~~aa~~i~g 737 (866)
.- . |+.+| +. +.. ...+. ..|++|++|-+..+|. .+..-+..+.-.+..|+.
T Consensus 383 p~----~--g~pFd-~~-~~n-~~grv~~~~~g~Y~~GWiKrGP~GvIgtn~~da~~t~~~v~~ 437 (506)
T PTZ00188 383 NF----A--ENLYN-QS-VQM-FKEDIGQHKFAIFKAGWFDKGPKGNIASQILNSKNSTHLVLN 437 (506)
T ss_pred CC----C--CCCcc-cc-CCC-CCCcccCCCCCcEEeeecCcCCCceeccCcccHHHHHHHHHH
Confidence 31 1 34555 22 221 11222 3799999999997773 333333444445555543
No 117
>KOG1800|consensus
Probab=99.50 E-value=5.7e-13 Score=138.18 Aligned_cols=287 Identities=15% Similarity=0.218 Sum_probs=162.2
Q ss_pred ccceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
...|+|||+||||+++|.+|.++ +++|.++|+. +.++|.. .||+.+
T Consensus 20 ~p~vcIVGsGPAGfYtA~~LLk~~~~~~Vdi~Ek~------PvPFGLv--------------------------RyGVAP 67 (468)
T KOG1800|consen 20 TPRVCIVGSGPAGFYTAQHLLKRHPNAHVDIFEKL------PVPFGLV--------------------------RYGVAP 67 (468)
T ss_pred CceEEEECCCchHHHHHHHHHhcCCCCeeEeeecC------Cccccee--------------------------eeccCC
Confidence 46899999999999999999884 6999999998 5555533 223322
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~ 546 (866)
..+... .....+...+++....++-+..+-. .+.+ ...+-.||.||||+|+. ++.
T Consensus 68 DHpEvK-------------nvintFt~~aE~~rfsf~gNv~vG~--------dvsl---~eL~~~ydavvLaYGa~~dR~ 123 (468)
T KOG1800|consen 68 DHPEVK-------------NVINTFTKTAEHERFSFFGNVKVGR--------DVSL---KELTDNYDAVVLAYGADGDRR 123 (468)
T ss_pred CCcchh-------------hHHHHHHHHhhccceEEEecceecc--------cccH---HHHhhcccEEEEEecCCCCcc
Confidence 211110 0001112223333333332222211 1111 11244699999999986 444
Q ss_pred CCCCcCCCceEecchhhhcccc------------CCCeEEEECCcHHHHHHHHHHHhc----------------------
Q psy9583 547 FPGVKFDENLILSNKGALEMIN------------VPKKLCIIGAGVIGLEIGSIWRRL---------------------- 592 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~------------~~~~vvVIGgG~~glE~A~~l~~~---------------------- 592 (866)
+.+++.+...+++.+.+..|.. ...+++|||.|.+++++|..|...
T Consensus 124 L~IPGe~l~~V~Sarefv~Wyng~P~~~~le~dls~~~vvIvG~GNVAlDvARiLls~~~~l~~~TDi~~~aL~~L~~s~ 203 (468)
T KOG1800|consen 124 LDIPGEELSGVISAREFVGWYNGLPENQNLEPDLSGRKVVIVGNGNVALDVARILLSPQGPLFRRTDIPKLALNLLKRSN 203 (468)
T ss_pred cCCCCcccccceehhhhhhhccCCCcccccCcccccceEEEEccCchhhhhhhhhhCCccccccccCCcHHHHhhhhcCC
Confidence 4444434455666665555442 247899999999999999887532
Q ss_pred CCcEEEEecCCcCCCccc--------------------------------------HHHHHHHHHHHHHc---------C
Q psy9583 593 GSEVTILEMSSNFLNTVD--------------------------------------EEIAKKAFHLLNKQ---------G 625 (866)
Q Consensus 593 g~~Vtli~~~~~~l~~~d--------------------------------------~~~~~~l~~~l~~~---------G 625 (866)
=.+|+++.|+..+...|. +++.+.+.+.+.++ +
T Consensus 204 VkdV~lvgRRgp~~~aFTiKELRE~~~l~~~~~r~~~~~~~~~~~~~~~~~~~RpRkrl~ell~k~~~e~~~~~~~~~~~ 283 (468)
T KOG1800|consen 204 VKDVKLVGRRGPLQVAFTIKELREVLELPGARPRLDPVDFSGKWMDESETPQHRPRKRLTELLLKWAREHRAKASEEAGG 283 (468)
T ss_pred cceEEEEeccCccceeeeHHHHHHHhCCCCcccccCchhccceeCCcccccccCchhHHHHHHHHHHHhhhhccccccCc
Confidence 125888877654322110 22333333333331 1
Q ss_pred C---EEEeCceEEEEEEcCCe---EEEEEeeCC---CCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEE
Q psy9583 626 L---NIILNTKIHDIKINKEN---VLINYSNKS---TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFII 696 (866)
Q Consensus 626 V---~i~~~~~v~~i~~~~~~---~~v~~~~~~---g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 696 (866)
. .+.+......|..+.++ +.+..+... -...+...+++|++++.++|++...-. .|+.+|.+-.+.
T Consensus 284 ~k~w~~~f~r~P~~i~~~~~~v~~~~~~~t~l~~~~~~~tg~~e~~p~~l~i~sIGYks~pv~-----~gipFd~~kgvv 358 (468)
T KOG1800|consen 284 SKQWHLRFFRTPGAILPGADGVSGVRFQVTILEGTQAVPTGAFETLPCGLLIRSIGYKSVPVD-----SGIPFDDKKGVV 358 (468)
T ss_pred cchhHHHHhcCHHHhccCcccccceEEEeeeehhhcccccCceEeeccceeEeeeeecccccC-----CCCCcccccCcc
Confidence 1 11111222333333221 211111111 122334678999999999998754321 145555443355
Q ss_pred eCCCCCC----CCCCEEEecccCCCC-CcHHHHHHHHHHHHHHHhC
Q psy9583 697 VNDNCET----NIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 697 Vd~~l~T----s~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i~g 737 (866)
-|...+. ..|++|++|-|..+| .....+++++...|+.|+.
T Consensus 359 ~n~~GrV~~s~~~pglY~sGW~k~GP~GvIattm~dAf~v~d~I~q 404 (468)
T KOG1800|consen 359 PNVNGRVLVSGCSPGLYASGWVKHGPTGVIATTMQDAFEVADTIVQ 404 (468)
T ss_pred cCCCceEEeeccCCceEEEeeeccCCcceeeehhhhHHHHHHHHHH
Confidence 4544443 359999999999877 4677788888888888874
No 118
>PRK05889 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Provisional
Probab=99.49 E-value=1.7e-13 Score=113.04 Aligned_cols=62 Identities=23% Similarity=0.426 Sum_probs=60.4
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|.+|++++||.|++||+|+++|+||+.++|.||.+|+|.++++++|+.|..|++|+.++
T Consensus 10 ~G~i~~~~v~~Gd~V~~g~~l~~ve~~K~~~~I~a~~~G~V~~i~v~~G~~V~~G~~l~~i~ 71 (71)
T PRK05889 10 VASVLEVVVNEGDQIGKGDTLVLLESMKMEIPVLAEVAGTVSKVSVSVGDVIQAGDLIAVIS 71 (71)
T ss_pred CEEEEEEEeCCCCEECCCCEEEEEEeccceeEEeCCCCEEEEEEEeCCCCEECCCCEEEEEC
Confidence 49999999999999999999999999999999999999999999999999999999999875
No 119
>KOG3851|consensus
Probab=99.48 E-value=3e-13 Score=136.74 Aligned_cols=204 Identities=16% Similarity=0.285 Sum_probs=126.0
Q ss_pred EEcCCceEEEecEEEEecCCCCc--CCCCCc--CCCceEec----------chhhhcccc------CCC-eEEEECCcHH
Q psy9583 523 IINKTKETITAKYIIIATGSKAR--SFPGVK--FDENLILS----------NKGALEMIN------VPK-KLCIIGAGVI 581 (866)
Q Consensus 523 v~~~~g~~i~~d~lViATGs~p~--~~p~~~--~~~~~~~t----------~~~~~~~~~------~~~-~vvVIGgG~~ 581 (866)
|.+.+|++|+||++|||+|-.-+ .++|.. ++.+.+.+ ...+.+... .|. -+-..|+-.-
T Consensus 124 v~t~gg~eIsYdylviA~Giql~y~~IkGl~Eal~tP~VcSnYSpkyvdk~y~~~~~fk~GNAIfTfPntpiKCAGAPQK 203 (446)
T KOG3851|consen 124 VVTRGGEEISYDYLVIAMGIQLDYGKIKGLVEALDTPGVCSNYSPKYVDKVYKELMNFKKGNAIFTFPNTPIKCAGAPQK 203 (446)
T ss_pred EEccCCcEEeeeeEeeeeeceeccchhcChHhhccCCCcccccChHHHHHHHHHHHhccCCceEEecCCCccccCCCchh
Confidence 34467899999999999997643 344431 22222221 111222111 122 2334466666
Q ss_pred HHHHHH-HHHhcCCc--EEEEecC--CcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCcc
Q psy9583 582 GLEIGS-IWRRLGSE--VTILEMS--SNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVK 656 (866)
Q Consensus 582 glE~A~-~l~~~g~~--Vtli~~~--~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~ 656 (866)
.+-++. .++++|.+ +.++... +.+. --....+.+++..++++|++.+...+.++..++.....+.-++.|.
T Consensus 204 i~yise~y~Rk~gvRd~a~iiy~Tsl~~iF--gVk~Y~~AL~k~~~~rni~vn~krnLiEV~~~~~~AvFe~L~kPG~-- 279 (446)
T KOG3851|consen 204 IMYISESYFRKRGVRDNANIIYNTSLPTIF--GVKHYADALEKVIQERNITVNYKRNLIEVRTNDRKAVFENLDKPGV-- 279 (446)
T ss_pred hhhhhHHHHHHhCccccccEEEecCcccee--cHHHHHHHHHHHHHhcceEeeeccceEEEeccchhhHHHhcCCCCc--
Confidence 666665 45556653 4444432 2222 1356688899999999999999999988887654433222222243
Q ss_pred ceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC-CCC-CCCCCEEEecccCCCCC--cHHHHHHHHHHHH
Q psy9583 657 TEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND-NCE-TNIPNIYAIGDVVRGPM--LAHKAEEEGIMVA 732 (866)
Q Consensus 657 ~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~-~l~-Ts~~~VyA~GD~a~~~~--~~~~A~~~g~~aa 732 (866)
..+++++++-+.....+.. . +.++.+ .|..|++.||. .+| +.+||||++|||.+.|. .+..+..|..+.-
T Consensus 280 --t~ei~yslLHv~Ppms~pe-~--l~~s~~-adktGfvdVD~~TlQs~kypNVFgiGDc~n~PnsKTaAAvaaq~~vv~ 353 (446)
T KOG3851|consen 280 --TEEIEYSLLHVTPPMSTPE-V--LANSDL-ADKTGFVDVDQSTLQSKKYPNVFGIGDCMNLPNSKTAAAVAAQSPVVD 353 (446)
T ss_pred --eeEEeeeeeeccCCCCChh-h--hhcCcc-cCcccceecChhhhccccCCCceeeccccCCCchhhHHHHHhcCchhh
Confidence 5688999888776655433 3 345554 46789999995 566 57999999999998774 4444556667777
Q ss_pred HHHh
Q psy9583 733 EHIS 736 (866)
Q Consensus 733 ~~i~ 736 (866)
+|+.
T Consensus 354 ~nl~ 357 (446)
T KOG3851|consen 354 KNLT 357 (446)
T ss_pred hhHH
Confidence 7775
No 120
>cd06663 Biotinyl_lipoyl_domains Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, or methylamine, respectively, between components of the complex/protein via a biotinyl or lipoyl group, which is covalently attached to a highly conserved lysine residue.
Probab=99.44 E-value=7e-13 Score=110.55 Aligned_cols=72 Identities=28% Similarity=0.601 Sum_probs=69.8
Q ss_pred EecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEE
Q psy9583 6 VKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALI 77 (866)
Q Consensus 6 ~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~ 77 (866)
|.+|++|.++.+|++.+|++++||.|++||+|+++|++|+..+|.||.+|+|.+++++.|+.+..|+.|+.+
T Consensus 2 ~~~~~~~~~~~~g~~~~~~v~~G~~v~~g~~l~~ie~~k~~~~i~ap~~G~v~~~~~~~g~~v~~g~~l~~i 73 (73)
T cd06663 2 ILIPDLAQHLGDGTVVKWLKKVGDKVKKGDVLAEIEAMKATSDVEAPKSGTVKKVLVKEGTKVEGDTPLVKI 73 (73)
T ss_pred cccCCCCCCccCEEEEEEEcCCcCEECCCCEEEEEEeCCeEEEEEcCCCEEEEEEEeCCCCEECCCCEEEEC
Confidence 678999999999999999999999999999999999999999999999999999999999999999999864
No 121
>PRK08225 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Probab=99.37 E-value=2.7e-12 Score=105.75 Aligned_cols=62 Identities=21% Similarity=0.378 Sum_probs=60.3
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|.+|++++||+|++||+|+++|+||+.+++.||.+|+|.++++++|+.|..|++|+.++
T Consensus 9 ~G~i~~~~v~~G~~V~~g~~l~~ve~~k~~~~v~s~~~G~v~~~~~~~G~~V~~g~~l~~ie 70 (70)
T PRK08225 9 AGNVWKIVVKVGDTVEEGQDVVILESMKMEIPIVAEEAGTVKKINVQEGDFVNEGDVLLEIE 70 (70)
T ss_pred CEEEEEEEeCCCCEECCCCEEEEEEcCCCcceEeCCCCEEEEEEEecCCCEECCCCEEEEEC
Confidence 39999999999999999999999999999999999999999999999999999999999985
No 122
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=99.36 E-value=2.1e-12 Score=151.73 Aligned_cols=77 Identities=31% Similarity=0.579 Sum_probs=73.9
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ .+|+||+|| |+||+|++|+|++||.|++||+|++|||||++++|+||.+|+|.++++++|+.|++|++|+.|+.+
T Consensus 1 m~-~~i~~P~lg--~~eg~i~~~~v~~Gd~V~~g~~l~~vEt~K~~~~v~a~~~G~v~~i~~~~g~~V~~G~~l~~i~~~ 77 (633)
T PRK11854 1 MA-IEIKVPDIG--ADEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGVVKEIKVKVGDKVETGALIMIFESA 77 (633)
T ss_pred CC-ceEeeCCCC--CceEEEEEEEeCCCCEECCCCEEEEEEeCCeeEEEeCCCCEEEEEEEeCCCCEEeCCCEEEEEecc
Confidence 44 489999999 999999999999999999999999999999999999999999999999999999999999999865
No 123
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.36 E-value=3.1e-10 Score=123.66 Aligned_cols=206 Identities=13% Similarity=0.138 Sum_probs=120.9
Q ss_pred cceeeecCCccHHHHHHHHHHC---CCeEEEEeccCCCcccccCCCccceeccc-------cchhHHHh-hHHHHHHhhh
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDNEENFALGGTCTNVGCI-------PSKALLQT-SHSFENVKNS 459 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~~~~~~~GG~~~~~g~~-------P~~~~~~~-~~~~~~~~~~ 459 (866)
++|+|||||++|++.|.+|.+. ...|.|||+. +.+|+...|...- |...+... ....+.+..+
T Consensus 2 ~~VAIIGgG~sGi~~A~~Ll~~~~~~~~Isi~e~~------~~~G~GiaYs~~~p~~~lNv~a~~mS~~~pD~p~~F~~W 75 (474)
T COG4529 2 FKVAIIGGGFSGIYMAAHLLKSPRPSGLISIFEPR------PNFGQGIAYSTEEPEHLLNVPAARMSAFAPDIPQDFVRW 75 (474)
T ss_pred ceEEEECCchHHHHHHHHHHhCCCCCCceEEeccc------cccCCCccCCCCCchhhhccccccccccCCCCchHHHHH
Confidence 7899999999999999999887 2339999998 6777555444333 33333222 2323334443
Q ss_pred hhhcCcccc--ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCC---cEEEEeEEEEeccccCcccEEEEEcCCceEEEec
Q psy9583 460 FFEYGINTQ--NVTLNLQKMLERKNNIIKKNNSGILFLFKKNK---IKFFHGHAIFTGKIQNNFHEIQIINKTKETITAK 534 (866)
Q Consensus 460 ~~~~gi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---V~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d 534 (866)
+...+-... .....+...+..+.-+..++...+..++++.. +.++........... ......+...+|....+|
T Consensus 76 L~~~~~~~~d~~~~~~d~~~y~pR~lfG~Yl~e~l~~l~~~~~~~~v~~~~~~a~~~~~~~-n~~~~~~~~~~g~~~~ad 154 (474)
T COG4529 76 LQKQLQRYRDPEDINHDGQAYPPRRLFGEYLREQLAALLARGRQTRVRTIREEATSVRQDT-NAGGYLVTTADGPSEIAD 154 (474)
T ss_pred HHhcccccCChhhcCCccccccchhHHHHHHHHHHHHHHHhcCccceeEEeeeeecceecc-CCceEEEecCCCCeeeee
Confidence 433311100 00111222222233333444455566666554 667766666543311 234556666778889999
Q ss_pred EEEEecCCCCcCCCCC--cCCC-ceEe-cch--hhhccccCCCeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCC
Q psy9583 535 YIIIATGSKARSFPGV--KFDE-NLIL-SNK--GALEMINVPKKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSS 603 (866)
Q Consensus 535 ~lViATGs~p~~~p~~--~~~~-~~~~-t~~--~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~ 603 (866)
-+|+|||..+...+.. .+.+ ..++ +.. +.+.-.....+|+|+|.|.+-++....|.++|. +||++.|..
T Consensus 155 ~~Vlatgh~~~~~~~~~~~~~~~~~~ia~~~~~~~ld~v~~~drVli~GsgLt~~D~v~~l~~~gh~g~It~iSRrG 231 (474)
T COG4529 155 IIVLATGHSAPPADPAARDLKGSPRLIADPYPANALDGVDADDRVLIVGSGLTSIDQVLVLRRRGHKGPITAISRRG 231 (474)
T ss_pred EEEEeccCCCCCcchhhhccCCCcceeccccCCcccccccCCCceEEecCCchhHHHHHHHhccCCccceEEEeccc
Confidence 9999999765433221 1111 1111 111 222222345669999999999999999999876 589998865
No 124
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=99.35 E-value=2.9e-12 Score=148.67 Aligned_cols=79 Identities=38% Similarity=0.625 Sum_probs=75.8
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ ++|+||+||++|+||+|++|+|++||.|++||+|+++||||++++++||.+|+|.++++++|+.|++|++|+.++..
T Consensus 1 M~-~~i~~P~lg~~~~eg~i~~w~v~~Gd~V~~g~~l~~vEtdKa~~ev~a~~~G~v~~i~v~~Gd~v~vG~~ia~i~~~ 79 (590)
T TIGR02927 1 MA-FSVEMPALGESVTEGTITQWLKAEGDTVELDEPLLEVSTDKVDTEIPSPAAGVILEIKAEEDDTVDIGGEIAIIGEA 79 (590)
T ss_pred CC-eeEECCCCCCCccEEEEEEEEECCCCEEeCCCeEEEEEecceEEEecCCCCEEEEEEeecCCCEEeeeeeEEEEeec
Confidence 44 68999999999999999999999999999999999999999999999999999999999999999999999999753
No 125
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=99.34 E-value=1.2e-11 Score=105.05 Aligned_cols=78 Identities=32% Similarity=0.554 Sum_probs=73.8
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEe
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYS 649 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~ 649 (866)
+++|||||++|+|+|..|.++|.+|+++++.+.+++.+++++...+++.|++.||++++++.+++++.+++++.++++
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~V~~~ 78 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHTNTKVKEIEKDGDGVEVTLE 78 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEESEEEEEEEEETTSEEEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEEe
Confidence 689999999999999999999999999999999999999999999999999999999999999999998877666665
No 126
>COG0511 AccB Biotin carboxyl carrier protein [Lipid metabolism]
Probab=99.31 E-value=4.3e-12 Score=118.90 Aligned_cols=62 Identities=27% Similarity=0.421 Sum_probs=60.6
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
-|++.+.+|++||+|++||+||.||.||+.++|+||.+|+|.+|++++||.|..|++|+.|+
T Consensus 78 ~Gtv~~~~V~vGd~V~~Gq~l~IiEAMKmeneI~A~~~G~V~~Ilv~~G~~Ve~G~~L~~I~ 139 (140)
T COG0511 78 VGTVYKPFVEVGDTVKAGQTLAIIEAMKMENEIEAPADGVVKEILVKNGDPVEYGDPLAVIE 139 (140)
T ss_pred ceEEEEEeeccCCEEcCCCEEEEEEeeeccceecCCCCcEEEEEEecCCCccCCCCEEEEec
Confidence 49999999999999999999999999999999999999999999999999999999999986
No 127
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=99.30 E-value=6.5e-11 Score=118.38 Aligned_cols=174 Identities=10% Similarity=0.120 Sum_probs=127.4
Q ss_pred ccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCC-eeEEccceeEEEEEecC
Q psy9583 192 NSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGN-NIIYHKYYDIGIAISSS 270 (866)
Q Consensus 192 ~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~-~~~~~~~~~i~~av~~~ 270 (866)
..|.++++.++|+|+|.++.++. ++++...+++++++|+.++|+|+-++.++ ++++++.++.+.+|-.+
T Consensus 24 ~~p~~svT~~lDvT~l~~~~K~~----------~~~Ff~~~ly~i~ka~N~~~efR~ri~~~g~v~~~d~i~ps~Tv~~~ 93 (206)
T PF00302_consen 24 DNPYFSVTVNLDVTNLYKYAKEK----------GLSFFPAYLYAIMKAANEIPEFRYRIVDDGEVVYYDRIDPSYTVFHK 93 (206)
T ss_dssp SBEEEEEEEEEE-HHHHHHHHHT----------T--HHHHHHHHHHHHHTTSGGGCEEEETTSCEEEESS-EEEEEEEET
T ss_pred CCceEecceeEEhHHHHHHHHHc----------CCCcHHHHHHHHHHHHhcCHHHheeeeCCCcEEEECCcceeeeEEeC
Confidence 56899999999999998776543 78999999999999999999999999987 99999999999999864
Q ss_pred -CceEEeEEecCCCCCHHHHHHHHHHHHHHHhcC-CCCccc-cCCceEEEEcCCCcCcccccccc-CCCc--eEEEEecc
Q psy9583 271 -RGLVVPILRNADTMSIADIEKKINEFINKAQDN-KLLPEE-MSGGTFTISNGGVFGSMLSTPII-NPPQ--SAILGVHA 344 (866)
Q Consensus 271 -~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~-~l~~~~-~~~gt~tisn~g~~g~~~~~~ii-~~p~--~~il~vg~ 344 (866)
++.+.-+-- .-..++.++.+...+.++++++. .+.+.+ .....|.+|++.|+.-++++--+ +.+. .++++.|+
T Consensus 94 ~~~tFs~~~~-~y~~df~~F~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~S~lPW~~FTs~~~~~~~~~~~~~P~it~GK 172 (206)
T PF00302_consen 94 DDETFSFCWT-EYDEDFEEFYANYEADIERYKESKGLFPKPNDPDNLIYISCLPWVSFTSFSHPVPNGKDDSIPRITWGK 172 (206)
T ss_dssp TTTEEEEEEE----SSHHHHHHHHHHHHHHHTTS-SSSTTCCHHSSEEEEEEETTS--SEEEEEESSTTT-SS-EEEEE-
T ss_pred CCCeEEEEEe-cCCCCHHHHHHHHHHHHHHHhccccccCCCCCCcCEEEEecccceecccccccccCCCcccccEEEeee
Confidence 565544433 34449999999999999998774 455543 56679999999999555543322 2222 57788887
Q ss_pred ceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 345 IKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 345 ~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
..++ +| |-.||+++...|.++||.+..++...
T Consensus 173 ~~~~----~g----r~~mPvsiqvhHa~~DG~Hv~~F~~~ 204 (206)
T PF00302_consen 173 YFEE----NG----RLLMPVSIQVHHALVDGYHVGQFFEE 204 (206)
T ss_dssp -EEE----TT----EEEEEEEEEEETTT--HHHHHHHHHH
T ss_pred eEeE----CC----EEEEEEEEEEecccccHHHHHHHHHH
Confidence 6542 32 67899999999999999998877653
No 128
>PRK07051 hypothetical protein; Validated
Probab=99.30 E-value=1.8e-11 Score=103.28 Aligned_cols=72 Identities=28% Similarity=0.311 Sum_probs=66.9
Q ss_pred CccEEEecCCCCCCCCeEEEEE-------EEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCE
Q psy9583 1 MALIEVKIPKLSESISEATLLN-------WHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQV 73 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~-------w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~ 73 (866)
|+..+|..|. .|++.+ |++++||.|++||+++++|+||+.++|.||.+|+|.++++++|+.|..|++
T Consensus 1 ~~~~~~~ap~------~g~~~~~~~~~~~~~v~~Gd~V~~g~~l~~ve~~k~~~~i~a~~~G~v~~i~~~~G~~V~~G~~ 74 (80)
T PRK07051 1 MAQHEIVSPL------PGTFYRRPSPDAPPYVEVGDAVAAGDVVGLIEVMKQFTEVEAEAAGRVVEFLVEDGEPVEAGQV 74 (80)
T ss_pred CCccEEeCCC------ceEEEecCCCCCCCccCCCCEECCCCEEEEEEEcceEEEEeCCCCEEEEEEEcCCcCEECCCCE
Confidence 6778888884 367777 999999999999999999999999999999999999999999999999999
Q ss_pred EEEEe
Q psy9583 74 IALID 78 (866)
Q Consensus 74 l~~~~ 78 (866)
|+.++
T Consensus 75 l~~i~ 79 (80)
T PRK07051 75 LARIE 79 (80)
T ss_pred EEEEe
Confidence 99986
No 129
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=99.25 E-value=2.6e-10 Score=114.53 Aligned_cols=186 Identities=10% Similarity=0.105 Sum_probs=139.7
Q ss_pred HHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCCeeEEc
Q psy9583 179 RLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNNIIYH 258 (866)
Q Consensus 179 r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~ 258 (866)
||.--....+. .. |.++++.++|+|+|.++.++. ++++.+.+++|+++|+.++|+|+-++.+++++.+
T Consensus 18 RkehF~~f~~~-~~-~~fsiT~~iDiT~l~~~~K~~----------~~~fy~~~ly~v~kavN~~~eFR~r~~~~~v~~~ 85 (219)
T PRK13757 18 RKEHFEAFQSV-AQ-CTYNQTVQLDITAFLKTVKKN----------KHKFYPAFIHILARLMNAHPEFRMAMKDGELVIW 85 (219)
T ss_pred cHHHHHHHhcC-CC-CceEEEEEEEHHHHHHHHHHc----------CCChHHHHHHHHHHHHhcCHhHheEEECCeEEEE
Confidence 44444444332 22 349999999999998766543 7899999999999999999999999999999999
Q ss_pred cceeEEEEEecCCc-eEEeEEecCCCCCHHHHHHHHHHHHHHHhcC-CCCccccCCceEEEEcCCCcCcccccc-ccCCC
Q psy9583 259 KYYDIGIAISSSRG-LVVPILRNADTMSIADIEKKINEFINKAQDN-KLLPEEMSGGTFTISNGGVFGSMLSTP-IINPP 335 (866)
Q Consensus 259 ~~~~i~~av~~~~g-l~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~-~l~~~~~~~gt~tisn~g~~g~~~~~~-ii~~p 335 (866)
+.++.+.++-.++. ++.- +.-.-.-++.++.+...+.++++++. .+.+.......|.||++.|+.-++++- +-+..
T Consensus 86 D~i~ps~Ti~~~~~~tFs~-~~~~y~~df~~F~~~~~~~~~~~~~~~~~~~~~~~~n~~~iS~iPW~sFTs~~~~~~~~~ 164 (219)
T PRK13757 86 DSVHPCYTVFHEQTETFSS-LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMD 164 (219)
T ss_pred eEEeeeEEEEeCCCceEEE-EEecCcCCHHHHHHHHHHHHHHHhcCccccCCCCCCCeEEeecccCcCccccccccccCC
Confidence 99999999996664 4543 44444458999988888888888886 465555566799999999995444322 22222
Q ss_pred --ceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhhh
Q psy9583 336 --QSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMSF 385 (866)
Q Consensus 336 --~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~~ 385 (866)
.+++++.|+..+ ++| |-.||+++...|.++||.+..++...-
T Consensus 165 ~~~~P~it~GKy~~----~~g----r~~mPvSvqvHHa~~DG~Hv~~F~~~l 208 (219)
T PRK13757 165 NFFAPVFTMGKYYT----QGD----KVLMPLAIQVHHAVCDGFHVGRMLNEL 208 (219)
T ss_pred CCcCcEEEeeceEE----ECC----EEEEEEEEEEehhccchHHHHHHHHHH
Confidence 236777776642 222 678999999999999999998876543
No 130
>PRK06549 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Probab=99.25 E-value=2.6e-11 Score=110.43 Aligned_cols=62 Identities=26% Similarity=0.337 Sum_probs=60.1
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEE
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALI 77 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~ 77 (866)
..|+|.+|++++||.|++||+|+++|+||+.++|.||.+|+|.++++++||.|..|++|+.|
T Consensus 68 ~~G~V~~i~V~~Gd~V~~Gq~L~~lEamKme~eI~Ap~~G~V~~i~v~~Gd~V~~G~~L~~I 129 (130)
T PRK06549 68 MPGTILKVLVAVGDQVTENQPLLILEAMKMENEIVASSAGTVTAIHVTPGQVVNPGDGLITI 129 (130)
T ss_pred CCEEEEEEEeCCCCEECCCCEEEEEeccCccEEEEcCCCeEEEEEEeCCCCEeCCCCEEEEe
Confidence 35999999999999999999999999999999999999999999999999999999999987
No 131
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=99.23 E-value=3.3e-11 Score=127.89 Aligned_cols=149 Identities=23% Similarity=0.372 Sum_probs=92.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccC--CCccceecc-ccchhHHHhh---H---------HHH
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFAL--GGTCTNVGC-IPSKALLQTS---H---------SFE 454 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~--GG~~~~~g~-~P~~~~~~~~---~---------~~~ 454 (866)
.+||+|||||||||.||..+++.|++|+|||+.+.+.+.-.+ ||.|..... .|...+...+ + ..+
T Consensus 3 ~~dviIIGgGpAGlMaA~~aa~~G~~V~lid~~~k~GrKil~sGgGrCN~Tn~~~~~~~ls~~p~~~~fl~sal~~ft~~ 82 (408)
T COG2081 3 RFDVIIIGGGPAGLMAAISAAKAGRRVLLIDKGPKLGRKILMSGGGRCNFTNSEAPDEFLSRNPGNGHFLKSALARFTPE 82 (408)
T ss_pred cceEEEECCCHHHHHHHHHHhhcCCEEEEEecCccccceeEecCCCCccccccccHHHHHHhCCCcchHHHHHHHhCCHH
Confidence 599999999999999999999999999999998544333332 566744332 2222221111 1 122
Q ss_pred HHhhhhhhcCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEec
Q psy9583 455 NVKNSFFEYGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAK 534 (866)
Q Consensus 455 ~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d 534 (866)
.+..+...+|+..... +..+++.. ..-...+.+.+...+++.||+++.++.+.. ++.....+.+.+.++.++.+|
T Consensus 83 d~i~~~e~~Gi~~~e~--~~Gr~Fp~-sdkA~~Iv~~ll~~~~~~gV~i~~~~~v~~--v~~~~~~f~l~t~~g~~i~~d 157 (408)
T COG2081 83 DFIDWVEGLGIALKEE--DLGRMFPD-SDKASPIVDALLKELEALGVTIRTRSRVSS--VEKDDSGFRLDTSSGETVKCD 157 (408)
T ss_pred HHHHHHHhcCCeeEEc--cCceecCC-ccchHHHHHHHHHHHHHcCcEEEecceEEe--EEecCceEEEEcCCCCEEEcc
Confidence 3334455556653211 01111110 001122334456668889999999998873 222335788888888889999
Q ss_pred EEEEecCCC
Q psy9583 535 YIIIATGSK 543 (866)
Q Consensus 535 ~lViATGs~ 543 (866)
.+|+|||+.
T Consensus 158 ~lilAtGG~ 166 (408)
T COG2081 158 SLILATGGK 166 (408)
T ss_pred EEEEecCCc
Confidence 999999943
No 132
>PRK08401 L-aspartate oxidase; Provisional
Probab=99.23 E-value=3.2e-11 Score=138.45 Aligned_cols=153 Identities=17% Similarity=0.163 Sum_probs=78.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCccc-ccCCCccceecc--ccchhH----------------HHhhH
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEEN-FALGGTCTNVGC--IPSKAL----------------LQTSH 451 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~-~~~GG~~~~~g~--~P~~~~----------------~~~~~ 451 (866)
+||+|||+|.||++||..+++.|.+|+||||....... ..-||.+..... .|...+ .....
T Consensus 2 ~DVvVVGaG~AGl~AAi~aae~G~~V~liek~~~~~~s~~a~ggi~~~~~~~ds~e~~~~d~~~~~~~~~d~~~v~~~~~ 81 (466)
T PRK08401 2 MKVGIVGGGLAGLTAAISLAKKGFDVTIIGPGIKKSNSYLAQAGIAFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVIS 81 (466)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCCCCCCcHHHcCCcccccCCCCcHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 79999999999999999999999999999997211000 001222211000 000000 00011
Q ss_pred HHHHHhhhhhhcCccccccc----cCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCC
Q psy9583 452 SFENVKNSFFEYGINTQNVT----LNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKT 527 (866)
Q Consensus 452 ~~~~~~~~~~~~gi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~ 527 (866)
.......++..+|+++.... ..+...+.........+.+.+...+++.+++++.+....+.. .+...+-+.. +
T Consensus 82 ~~~~~i~~L~~~Gv~f~~~~~~~g~~~~r~~~~~~~~G~~i~~~L~~~~~~~gv~i~~~~v~~l~~--~~g~v~Gv~~-~ 158 (466)
T PRK08401 82 KSSEAYDFLTSLGLEFEGNELEGGHSFPRVFTIKNETGKHIIKILYKHARELGVNFIRGFAEELAI--KNGKAYGVFL-D 158 (466)
T ss_pred HHHHHHHHHHHcCCCcccCCCcCCccCCeEEECCCCchHHHHHHHHHHHHhcCCEEEEeEeEEEEe--eCCEEEEEEE-C
Confidence 11122234555666543210 011110000011112334445556677899998775444422 1112222322 3
Q ss_pred ceEEEecEEEEecCCCCcC
Q psy9583 528 KETITAKYIIIATGSKARS 546 (866)
Q Consensus 528 g~~i~~d~lViATGs~p~~ 546 (866)
+..+.++.||+|||+....
T Consensus 159 g~~i~a~~VVLATGG~~~~ 177 (466)
T PRK08401 159 GELLKFDATVIATGGFSGL 177 (466)
T ss_pred CEEEEeCeEEECCCcCcCC
Confidence 5679999999999987653
No 133
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=99.22 E-value=3.8e-11 Score=139.31 Aligned_cols=79 Identities=34% Similarity=0.692 Sum_probs=75.1
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ .+++||++|+ |++|+|++|+|++||.|++||+|++|||||+.++|.||.+|+|.++++++|+.|.+|++|+.++..
T Consensus 1 M~-~~i~~p~~g~-~~~g~i~~~~v~~Gd~V~~g~~l~~iEt~K~~~~I~A~~~G~I~~i~v~~Gd~V~~G~~L~~i~~~ 78 (547)
T PRK11855 1 MA-IEFKVPDIGE-VVEVEVIEWLVKEGDTVEEDQPLVTVETDKATMEIPSPAAGVVKEIKVKVGDTVSVGGLLAVIEAA 78 (547)
T ss_pred CC-ceeecCCcCC-CceEEEEEEEcCCCCEeCCCCEEEEEEecCeeEEEecCCCeEEEEEEeCCCCEecCCceeeEeccc
Confidence 44 5799999999 999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred C
Q psy9583 81 I 81 (866)
Q Consensus 81 ~ 81 (866)
.
T Consensus 79 ~ 79 (547)
T PRK11855 79 G 79 (547)
T ss_pred c
Confidence 3
No 134
>PRK05641 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Probab=99.19 E-value=7.1e-11 Score=111.34 Aligned_cols=62 Identities=29% Similarity=0.517 Sum_probs=60.1
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEE
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALI 77 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~ 77 (866)
..|+|.+|++++||.|++||+|+++|+||+..+|.||.+|+|.++++++|+.|..|++|+.|
T Consensus 91 ~~G~I~~~~V~~Gd~V~~Gq~l~~iEamKme~eI~Ap~~G~V~~i~v~~Gd~V~~Gq~L~~I 152 (153)
T PRK05641 91 MPGKILRILVREGQQVKVGQGLLILEAMKMENEIPAPKDGVVKKILVKEGDTVDTGQPLIEL 152 (153)
T ss_pred CCeEEEEEEeCCCCEEcCCCEEEEEeecccceEEecCCCeEEEEEEcCCCCEECCCCEEEEe
Confidence 35999999999999999999999999999999999999999999999999999999999987
No 135
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism]
Probab=99.18 E-value=1.2e-10 Score=126.41 Aligned_cols=323 Identities=19% Similarity=0.216 Sum_probs=157.2
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCccccc--CCCccceecccc--c----------------hhHHHhhH
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFA--LGGTCTNVGCIP--S----------------KALLQTSH 451 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~--~GG~~~~~g~~P--~----------------~~~~~~~~ 451 (866)
||+|||+|.|||++|+.|.+. ++|+|+.|.+....++. -||.....+.-. . ........
T Consensus 9 dV~IiGsG~AGL~~AL~L~~~-~~V~vltk~~~~~~sS~~AQGGIAa~~~~~Ds~~~Hv~DTL~AG~glcD~~aV~~iv~ 87 (518)
T COG0029 9 DVLIIGSGLAGLTAALSLAPS-FRVTVLTKGPLGESSSYWAQGGIAAALSEDDSPELHVADTLAAGAGLCDEEAVEFIVS 87 (518)
T ss_pred cEEEECCcHHHHHHHHhCCCC-CcEEEEeCCCCCCccchhhcCceEeeeCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 899999999999999999998 99999999854433332 366553332111 1 11111111
Q ss_pred HHHHHhhhhhhcCccccccc---cCH--H------HHHHHHHHHHHhhhhhHHHHH-HhCCcEEEEeEEEE-eccccC-c
Q psy9583 452 SFENVKNSFFEYGINTQNVT---LNL--Q------KMLERKNNIIKKNNSGILFLF-KKNKIKFFHGHAIF-TGKIQN-N 517 (866)
Q Consensus 452 ~~~~~~~~~~~~gi~~~~~~---~~~--~------~~~~~~~~~~~~~~~~~~~~~-~~~gV~v~~g~~v~-~~~~~~-~ 517 (866)
.......++..+|+++.... +.+ + .++.-.....+.+...+.... +..+|+++.+.... +-..+. .
T Consensus 88 ~~~~ai~~Li~~Gv~FDr~~~g~~~lt~EggHS~rRIlH~~~~TG~~I~~~L~~~v~~~p~I~v~e~~~a~~li~~~~~~ 167 (518)
T COG0029 88 EAPEAIEWLIDLGVPFDRDEDGRLHLTREGGHSRRRILHAADATGKEIMTALLKKVRNRPNITVLEGAEALDLIIEDGIG 167 (518)
T ss_pred hHHHHHHHHHHcCCCCcCCCCCceeeeeecccCCceEEEecCCccHHHHHHHHHHHhcCCCcEEEecchhhhhhhcCCce
Confidence 12223334666777764322 111 1 111111111222333333333 34799999986554 221111 1
Q ss_pred ccEEEEEcCCc--eEEEecEEEEecCCCCcCCCCCc----CCCceEe-------cchhhhccccCCCeEEEECCcHHHHH
Q psy9583 518 FHEIQIINKTK--ETITAKYIIIATGSKARSFPGVK----FDENLIL-------SNKGALEMINVPKKLCIIGAGVIGLE 584 (866)
Q Consensus 518 ~~~v~v~~~~g--~~i~~d~lViATGs~p~~~p~~~----~~~~~~~-------t~~~~~~~~~~~~~vvVIGgG~~glE 584 (866)
...+.+...++ ..+.++.+|||||+-...+.... ..+..+- ...+. ++.+...+.+-.+.+... -
T Consensus 168 ~~Gv~~~~~~~~~~~~~a~~vVLATGG~g~ly~~TTNp~~~~GdGIamA~rAGa~v~Dl-EFvQFHPT~l~~~~~~~~-L 245 (518)
T COG0029 168 VAGVLVLNRNGELGTFRAKAVVLATGGLGGLYAYTTNPKGSTGDGIAMAWRAGAAVADL-EFVQFHPTALYIPQRRAF-L 245 (518)
T ss_pred EeEEEEecCCCeEEEEecCeEEEecCCCcccccccCCCccccccHHHHHHHcCCeecCc-cceeeccceecCCCCccc-e
Confidence 11344443332 67889999999997544321110 0010000 00000 001111122222211110 0
Q ss_pred HHHHHHhcCCcEEEEecCCcCCCccc-------H-HHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCcc
Q psy9583 585 IGSIWRRLGSEVTILEMSSNFLNTVD-------E-EIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVK 656 (866)
Q Consensus 585 ~A~~l~~~g~~Vtli~~~~~~l~~~d-------~-~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~ 656 (866)
+...++--|. +-+-..+++|++.++ . -++..+..++++.|-.++++.+-.. .+ . +.
T Consensus 246 iSEAVRGEGA-~L~~~~GeRFm~~~~p~~ELAPRDVVARAI~~e~~~~g~~V~LD~s~~~--~~--~----~~------- 309 (518)
T COG0029 246 ISEAVRGEGA-ILVNEDGERFMPDYHPRGELAPRDVVARAIDAEMKRGGADVFLDISHIP--GD--F----FE------- 309 (518)
T ss_pred eehhhhcCcc-EEECCCCCccccCCCCccccchHHHHHHHHHHHHHhcCCeEEEeccCCC--ch--h----hh-------
Confidence 1112222222 222345667776432 2 2456667777777665554432211 00 0 00
Q ss_pred ceeEEEec-cEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCC-----CCCcHHHHHHHH--
Q psy9583 657 TEIITSIF-DKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVR-----GPMLAHKAEEEG-- 728 (866)
Q Consensus 657 ~~~~~~~~-D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~-----~~~~~~~A~~~g-- 728 (866)
..++. ...+...|..|..+.++.-.. .-. -.|+|.||.+.||++|++||||.|+. ..++++++.-++
T Consensus 310 ---~rFP~I~~~c~~~GiD~~r~~IPV~Pa-aHY-~mGGI~vD~~GrTsi~gLYAiGEvA~TGlHGANRLASNSLLE~vV 384 (518)
T COG0029 310 ---RRFPTIYAACLKAGIDPTREPIPVVPA-AHY-TMGGIAVDANGRTSIPGLYAIGEVACTGLHGANRLASNSLLECLV 384 (518)
T ss_pred ---hhCcHHHHHHHHcCCCcccCccCccch-hhe-ecccEEECCCCcccCcccEEeeeecccccccchhhhhhhHHHHHH
Confidence 01111 112233455555554322211 111 25779999999999999999999985 346787776665
Q ss_pred --HHHHHHHhCC
Q psy9583 729 --IMVAEHISGQ 738 (866)
Q Consensus 729 --~~aa~~i~g~ 738 (866)
.-+|++|.+.
T Consensus 385 ~g~~aA~~i~~~ 396 (518)
T COG0029 385 FGKRAAEDIAGR 396 (518)
T ss_pred HHHHHHHHhhcc
Confidence 5566666665
No 136
>PRK06854 adenylylsulfate reductase subunit alpha; Validated
Probab=99.17 E-value=1.8e-10 Score=135.86 Aligned_cols=44 Identities=25% Similarity=0.239 Sum_probs=38.8
Q ss_pred cEEeC-------------CCCCCCCCCEEEecccCC--CCCcHHHHHHHHHHHHHHHhC
Q psy9583 694 FIIVN-------------DNCETNIPNIYAIGDVVR--GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 694 ~i~Vd-------------~~l~Ts~~~VyA~GD~a~--~~~~~~~A~~~g~~aa~~i~g 737 (866)
+|.|| ++++|++||+||+|||++ ...+.+.+..+|++|+.++..
T Consensus 371 Gi~vd~~~~~~~~~~~~~~~~~T~v~glyA~Ge~~~~~~~~l~~~s~~~g~~ag~~~~~ 429 (608)
T PRK06854 371 GYWVSGPEDWVPEEYKWGYNRMTTVEGLFAAGDVVGGSPHKFSSGSFAEGRIAAKAAVR 429 (608)
T ss_pred EEEecCcccccccccccccccccCCCCEEEeeecCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 48999 999999999999999975 467889999999999999863
No 137
>PF02817 E3_binding: e3 binding domain; InterPro: IPR004167 A small domain of the E2 subunit of 2-oxo-acid dehydrogenases that is responsible for the binding of the E3 subunit. Proteins containing this domain include the branched-chain alpha-keto acid dehydrogenase complex of bacteria, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide; and the E-3 binding protein of eukaryotic pyruvate dehydrogenase.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1BBL_A 1W4H_A 1BAL_A 2WXC_A 2BTH_A 2BTG_A 2CYU_A 2EQ7_C 2EQ8_C 3RNM_E ....
Probab=99.15 E-value=2.3e-11 Score=85.37 Aligned_cols=38 Identities=39% Similarity=0.705 Sum_probs=33.4
Q ss_pred ccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHh
Q psy9583 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLK 138 (866)
Q Consensus 100 ~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~ 138 (866)
++.+||+||++|+|+|||+++| +|||++|||+++||++
T Consensus 2 ~i~asP~ar~la~e~gidl~~v-~gtG~~GrI~k~Dv~a 39 (39)
T PF02817_consen 2 RIKASPAARKLAAELGIDLSQV-KGTGPGGRITKEDVLA 39 (39)
T ss_dssp SCCCSHHHHHHHHHTT--GGGS-SSSSTTSBBCHHHHHH
T ss_pred CcccCHHHHHHHHHcCCCcccc-cccCCCCcEeHHHhhC
Confidence 3568999999999999999999 8999999999999974
No 138
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=99.14 E-value=1.4e-10 Score=133.85 Aligned_cols=75 Identities=29% Similarity=0.551 Sum_probs=72.5
Q ss_pred EEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 5 ~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
+|+||+||+. .+|+|++|+|++||.|++||+|++||+||+.++|+|+.+|+|.++++++|+.|.+|++|+.++..
T Consensus 2 ~i~~p~lg~~-~~g~i~~~~v~~Gd~V~~G~~l~~vet~K~~~~I~a~~~G~V~~i~~~~Gd~V~~G~~La~i~~~ 76 (546)
T TIGR01348 2 EIKVPDIGDN-EEGEVIEVLVKPGDKVEAGQSLITLESDKASMEVPSSAAGIIKEIKVKVGDTLPVGGVIATLEVG 76 (546)
T ss_pred ceecCCCCCC-CceEEEEEEeCCCCEEcCCCEEEEEEcccceeEEEcCCCEEEEEEEecCCCEEeccceEEEEecc
Confidence 6899999987 99999999999999999999999999999999999999999999999999999999999999754
No 139
>PRK08275 putative oxidoreductase; Provisional
Probab=99.14 E-value=3.2e-10 Score=132.97 Aligned_cols=45 Identities=27% Similarity=0.367 Sum_probs=37.6
Q ss_pred CcEEeCCCCCCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHHhC
Q psy9583 693 NFIIVNDNCETNIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 693 G~i~Vd~~l~Ts~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g 737 (866)
|+|.||+.++|++||+||||||+. +......|.-.|+.|+.++..
T Consensus 357 Ggi~~d~~~~t~i~gl~a~Ge~~~~~~~~~~~~~~~G~~a~~~~~~ 402 (554)
T PRK08275 357 SGVWVNEKAETTVPGLYAAGDMASVPHNYMLGAFTYGWFAGENAAE 402 (554)
T ss_pred CcEEECCCCccCCCCEEECcccCCchhHHHHHHHHHHHHHHHHHHH
Confidence 569999999999999999999975 334566788889999888764
No 140
>TIGR00551 nadB L-aspartate oxidase. L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA.
Probab=99.13 E-value=4.4e-10 Score=129.95 Aligned_cols=32 Identities=34% Similarity=0.566 Sum_probs=30.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||+|.||++||..+++.|. |+|+||.
T Consensus 2 ~~DVlVVG~G~AGl~AA~~aa~~G~-V~lleK~ 33 (488)
T TIGR00551 2 SCDVVVIGSGAAGLSAALALADQGR-VIVLSKA 33 (488)
T ss_pred CccEEEECccHHHHHHHHHHHhCCC-EEEEEcc
Confidence 4799999999999999999999997 9999997
No 141
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.13 E-value=4.6e-10 Score=131.45 Aligned_cols=47 Identities=28% Similarity=0.476 Sum_probs=38.2
Q ss_pred CCcEEeCCCCCCCCCCEEEecccCCCC--------CcHHHHHHHHHHHHHHHhCC
Q psy9583 692 NNFIIVNDNCETNIPNIYAIGDVVRGP--------MLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 692 ~G~i~Vd~~l~Ts~~~VyA~GD~a~~~--------~~~~~A~~~g~~aa~~i~g~ 738 (866)
.|+|.||+++||++||+||+|+|+++. .....|+-.|++|+++++..
T Consensus 348 ~GGi~vd~~~~t~IpGLyAaGE~~gg~hG~~rlgG~sl~~a~v~Gr~Ag~~aa~~ 402 (543)
T PRK06263 348 MGGIRINEDCETNIPGLFACGEVAGGVHGANRLGGNALADTQVFGAIAGKSAAKN 402 (543)
T ss_pred cCCEEECCCCcccCCCeEeccccccCCCCCCccchhhhhhhHHHHHHHHHHHHHH
Confidence 477999999999999999999997532 12346788899999998753
No 142
>PLN02983 biotin carboxyl carrier protein of acetyl-CoA carboxylase
Probab=99.13 E-value=1.7e-10 Score=115.17 Aligned_cols=61 Identities=28% Similarity=0.361 Sum_probs=58.8
Q ss_pred EEEEE-------EEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 18 ATLLN-------WHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 18 g~i~~-------w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
|++.+ |+|++||.|++||+|++||+||+.++|+||.+|+|.++++++|+.|.+|++|+.|+
T Consensus 206 Gtf~r~p~pge~w~VkvGDsVkkGQvLavIEAMKmeieV~AP~sGtV~eIlVkeGD~V~vGqpL~~IE 273 (274)
T PLN02983 206 GTFYRSPAPGEPPFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIVEILAEDGKPVSVDTPLFVIE 273 (274)
T ss_pred eEEEeccCCCCcceeCCCCEecCCCEEEEEEeeceeeEEecCCCeEEEEEecCCCCEeCCCCEEEEec
Confidence 67777 99999999999999999999999999999999999999999999999999999985
No 143
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=99.12 E-value=5.6e-10 Score=130.78 Aligned_cols=108 Identities=16% Similarity=0.179 Sum_probs=81.0
Q ss_pred ccCCCeEEEECCcHHHHHHHHH-------HHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 567 INVPKKLCIIGAGVIGLEIGSI-------WRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 567 ~~~~~~vvVIGgG~~glE~A~~-------l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
...++.++++|++++++|++.. +.++|.+|+++...+..+..+...+...+.+.+++.|+++++++.++++..
T Consensus 157 ~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~L~~~~~~~gv~v~~~t~v~~l~~ 236 (557)
T PRK07843 157 GKVPLNMVVMQQDYVWLNLLKRHPRGVLRALKVGARTLWAKATGKNLLGMGQALAAGLRIGLQRAGVPVLLNTPLTDLYV 236 (557)
T ss_pred ccccccccccHHHHHHHHhhhcCchhHHHHHHHHHHHHHHhccCCCcccCcHHHHHHHHHHHHcCCCEEEeCCEEEEEEE
Confidence 4557889999999999998865 677888888776665555566777888899999999999999999999987
Q ss_pred cCCeEE-EEEeeCCCCccceeEEEecc-EEEEeec-cccCCCC
Q psy9583 640 NKENVL-INYSNKSTNVKTEIITSIFD-KLLIAIG-RIPNTNN 679 (866)
Q Consensus 640 ~~~~~~-v~~~~~~g~~~~~~~~~~~D-~vi~a~G-~~p~~~~ 679 (866)
+++.+. +.+.. ++. ...+.++ .||+|+| +.+|.++
T Consensus 237 ~~g~v~Gv~~~~-~g~----~~~i~A~~~VIlAtGG~~~n~~m 274 (557)
T PRK07843 237 EDGRVTGVHAAE-SGE----PQLIRARRGVILASGGFEHNEQM 274 (557)
T ss_pred eCCEEEEEEEEe-CCc----EEEEEeceeEEEccCCcCcCHHH
Confidence 655543 33332 333 3468885 6888775 6666655
No 144
>cd06850 biotinyl_domain The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.
Probab=99.11 E-value=3.8e-10 Score=92.32 Aligned_cols=62 Identities=27% Similarity=0.448 Sum_probs=59.6
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEE
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALI 77 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~ 77 (866)
-+|++.+|++++||.|++||+|+++|++|...+|+||.+|+|.++.++.|+.|..|++|+.|
T Consensus 6 ~~G~v~~~~v~~G~~v~~g~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~V~~G~~l~~i 67 (67)
T cd06850 6 MPGTVVKVLVKEGDKVEAGQPLAVLEAMKMENEVTAPVAGVVKEILVKEGDQVEAGQLLVVI 67 (67)
T ss_pred ccEEEEEEEeCCCCEECCCCEEEEEEcccEEEEEeCCCCEEEEEEEECCCCEECCCCEEEEC
Confidence 46999999999999999999999999999999999999999999999999999999999874
No 145
>PRK07804 L-aspartate oxidase; Provisional
Probab=99.11 E-value=1.1e-09 Score=127.87 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+|||+|.||++||..+++.|.+|+|+||..
T Consensus 16 ~~DVlVIG~G~AGl~AAi~aae~G~~VilleK~~ 49 (541)
T PRK07804 16 AADVVVVGSGVAGLTAALAARRAGRRVLVVTKAA 49 (541)
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCeEEEEEccC
Confidence 5999999999999999999999999999999973
No 146
>PRK12842 putative succinate dehydrogenase; Reviewed
Probab=99.09 E-value=1.1e-09 Score=128.90 Aligned_cols=113 Identities=11% Similarity=0.139 Sum_probs=85.1
Q ss_pred chhhhccccCCCeEEEECCcH--HHHHHHHHHHhcCCcEEEEecCCcCCCccc--------------HHHHHHHHHHHHH
Q psy9583 560 NKGALEMINVPKKLCIIGAGV--IGLEIGSIWRRLGSEVTILEMSSNFLNTVD--------------EEIAKKAFHLLNK 623 (866)
Q Consensus 560 ~~~~~~~~~~~~~vvVIGgG~--~glE~A~~l~~~g~~Vtli~~~~~~l~~~d--------------~~~~~~l~~~l~~ 623 (866)
.++..++...++++.|+|+++ ++.+++..+...+.+++++.+..++++.++ ..+...+.+.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~G~~l~~~L~~~~~~ 226 (574)
T PRK12842 147 GKDMARLRPPLKTITFIGMMFNSSNADLKHFFNATRSLTSFIYVAKRLATHLKDLALYRRGTQVTSGNALAARLAKSALD 226 (574)
T ss_pred hhhHHhhcCCcccccccceecccchHHHHHHHhhccchhHHHHHHHHHHhhHHHHhhccCCcccccHHHHHHHHHHHHHh
Confidence 455566677789999999998 899999999999999888776666554332 4567778888899
Q ss_pred cCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEecc-EEEEeeccccCC
Q psy9583 624 QGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFD-KLLIAIGRIPNT 677 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D-~vi~a~G~~p~~ 677 (866)
.|+++++++.++++..+++.+. +.+...++ ...+.++ .||+|+|..++.
T Consensus 227 ~Gv~i~~~~~v~~l~~~~g~V~GV~~~~~~~-----~~~i~a~k~VVlAtGg~~~n 277 (574)
T PRK12842 227 LGIPILTGTPARELLTEGGRVVGARVIDAGG-----ERRITARRGVVLACGGFSHD 277 (574)
T ss_pred CCCEEEeCCEEEEEEeeCCEEEEEEEEcCCc-----eEEEEeCCEEEEcCCCccch
Confidence 9999999999999987666543 33432223 2357786 799999977654
No 147
>PRK06175 L-aspartate oxidase; Provisional
Probab=99.08 E-value=4.8e-10 Score=127.28 Aligned_cols=36 Identities=28% Similarity=0.474 Sum_probs=31.7
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|+.++||||||+|.||++||..++ .|.+|+||||.+
T Consensus 1 m~~~~DVvVVG~G~AGl~AA~~a~-~G~~V~lleK~~ 36 (433)
T PRK06175 1 MNLYADVLIVGSGVAGLYSALNLR-KDLKILMVSKGK 36 (433)
T ss_pred CCccccEEEECchHHHHHHHHHhc-cCCCEEEEecCC
Confidence 334699999999999999999985 699999999973
No 148
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=99.08 E-value=1.5e-09 Score=134.01 Aligned_cols=67 Identities=24% Similarity=0.320 Sum_probs=46.8
Q ss_pred eccccCCCCCCccc--cCee-ecCCCcEEeCCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 671 IGRIPNTNNLNIDK--IGLK-VNENNFIIVNDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 671 ~G~~p~~~~l~l~~--~gl~-~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
.|..|..+.+.... .... -...|+|+||.+++|++||+||+|||++. ......|.-.|+.|+.++..
T Consensus 337 ~G~d~~~~~i~v~p~~~~~~~~~~~GGi~vd~~~~T~v~GLfAaGE~a~~~~nsl~~a~v~G~~Ag~~a~~ 407 (897)
T PRK13800 337 RGHDYRTHDIEMHISEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLACVPHNYMIGAFVFGDLAGAHAAG 407 (897)
T ss_pred cCCCcccccceecccccccccCCCcceEEecCCCcccCCCeEechhccCcchhhhhhHHHhHHHHHHHHHH
Confidence 47777776643111 1111 01247799999999999999999999864 34556788889999888864
No 149
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.07 E-value=1.4e-09 Score=128.26 Aligned_cols=36 Identities=28% Similarity=0.494 Sum_probs=31.9
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|..++||+|||+|.||++||+++++. .+|+|+||..
T Consensus 2 ~~~~~DVlVIG~G~AGl~AAl~aa~~-~~VilleK~~ 37 (583)
T PRK08205 2 QQHRYDVVIVGAGGAGMRAAIEAGPR-ARTAVLTKLY 37 (583)
T ss_pred cceeccEEEECccHHHHHHHHHHHhC-CCEEEEeCCC
Confidence 33468999999999999999999986 8999999973
No 150
>PRK09231 fumarate reductase flavoprotein subunit; Validated
Probab=99.07 E-value=8.9e-10 Score=129.55 Aligned_cols=47 Identities=23% Similarity=0.334 Sum_probs=37.8
Q ss_pred CCcEEeCCCCCCCCCCEEEecccCC-CC--------CcHHHHHHHHHHHHHHHhCC
Q psy9583 692 NNFIIVNDNCETNIPNIYAIGDVVR-GP--------MLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 692 ~G~i~Vd~~l~Ts~~~VyA~GD~a~-~~--------~~~~~A~~~g~~aa~~i~g~ 738 (866)
.|+|.||.+++|++||+||+|||++ +. .....|+-.|++|++++...
T Consensus 358 ~GGi~vd~~~~t~i~GLyAaGe~~~~g~hGanrlggnsl~~a~v~Gr~Ag~~aa~~ 413 (582)
T PRK09231 358 MGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAAER 413 (582)
T ss_pred CCCEEECCCCccccCCEEecccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHh
Confidence 5779999999999999999999974 21 23456777899999998753
No 151
>PRK09077 L-aspartate oxidase; Provisional
Probab=99.05 E-value=1.3e-09 Score=127.28 Aligned_cols=47 Identities=26% Similarity=0.275 Sum_probs=37.7
Q ss_pred CCcEEeCCCCCCCCCCEEEecccCC-CC--------CcHHHHHHHHHHHHHHHhCC
Q psy9583 692 NNFIIVNDNCETNIPNIYAIGDVVR-GP--------MLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 692 ~G~i~Vd~~l~Ts~~~VyA~GD~a~-~~--------~~~~~A~~~g~~aa~~i~g~ 738 (866)
.|+|.||.+.||++||+||+|+|++ +. .....|.-.|++|++++...
T Consensus 353 ~GGi~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~ 408 (536)
T PRK09077 353 CGGVMVDLHGRTDLDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSR 408 (536)
T ss_pred cCCeeECCCCccccCCEEecccccccccCCCccchhhhHHHHHHHHHHHHHHHHHh
Confidence 5779999999999999999999973 22 23456777899999998753
No 152
>TIGR00531 BCCP acetyl-CoA carboxylase, biotin carboxyl carrier protein. The gene name is accB or fabE.
Probab=99.04 E-value=5.7e-10 Score=106.46 Aligned_cols=61 Identities=21% Similarity=0.310 Sum_probs=58.6
Q ss_pred EEEEE-------EEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 18 ATLLN-------WHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 18 g~i~~-------w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
|++.+ |+|++||.|++||+||.||+||+.++|+|+.+|+|.+++++.|+.|..|++|+.|+
T Consensus 89 G~~~~~~~P~~~~~v~~Gd~V~~Gq~l~iiEamK~~~eI~A~~~G~v~~i~v~~g~~V~~Gq~L~~i~ 156 (156)
T TIGR00531 89 GTFYRAPSPDAKPFVEVGDKVKKGQIVCIVEAMKLMNEIEAEVAGKVVEILVENGQPVEYGQPLIVIE 156 (156)
T ss_pred EEEEecCCCCCCccccCCCEeCCCCEEEEEEecccceEEecCCCcEEEEEEeCCCCEECCCCEEEEEC
Confidence 77876 99999999999999999999999999999999999999999999999999999874
No 153
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit. During dissimilatory sulfate reduction or sulfur oxidation, adenylylsulfate (APS) reductase catalyzes reversibly the two-electron reduction of APS to sulfite and AMP. Found in several bacterial lineages and in Archaeoglobales, APS reductase is a heterodimer composed of an alpha subunit containing a noncovalently bound FAD, and a beta subunit containing two [4Fe-4S] clusters. Described by this model is the alpha subunit of APS reductase, sharing common evolutionary origin with fumarate reductase/succinate dehydrogenase flavoproteins.
Probab=99.03 E-value=6.4e-09 Score=121.79 Aligned_cols=39 Identities=21% Similarity=0.222 Sum_probs=33.1
Q ss_pred CCCCCCCCCEEEecccCC--CCCcHHHHHHHHHHHHHHHhC
Q psy9583 699 DNCETNIPNIYAIGDVVR--GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 699 ~~l~Ts~~~VyA~GD~a~--~~~~~~~A~~~g~~aa~~i~g 737 (866)
...+|++||+||+|||++ ...++.+|..+|.+++.++..
T Consensus 400 ~~~~T~i~gLyA~Ge~~~~~~h~l~~nsl~eg~~ag~~a~~ 440 (614)
T TIGR02061 400 YNRMTTVEGLFTCGDGVGASPHKFSSGSFTEGRIAAKAAVR 440 (614)
T ss_pred cCCccccCCEEeceecccCcchhhHHhHHHHHHHHHHHHHH
Confidence 778899999999999975 245888999999999988764
No 154
>PRK09897 hypothetical protein; Provisional
Probab=99.02 E-value=8.1e-09 Score=118.61 Aligned_cols=187 Identities=14% Similarity=0.160 Sum_probs=95.6
Q ss_pred cceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccceeccccchhHHHh----------hHHHHHHhh
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT----------SHSFENVKN 458 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~----------~~~~~~~~~ 458 (866)
++|+|||||++|+++|.+|.+.+ .+|+|||+. ..+|....+...-+++.++.. ....+....
T Consensus 2 ~~IAIIGgGp~Gl~~a~~L~~~~~~l~V~lfEp~------~~~G~G~ays~~~~~~~L~~N~~~~~~p~~~~~f~~Wl~~ 75 (534)
T PRK09897 2 KKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQA------DEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQK 75 (534)
T ss_pred CeEEEECCcHHHHHHHHHHHhcCCCCcEEEEecC------CCCCcceeecCCCChHHHHhcccccccCCChHHHHHHhhh
Confidence 68999999999999999998864 589999997 455633322222222211111 011111100
Q ss_pred ----hhhhcCccccccccCHHHHHHH--HHHHHHhhhhhHHHHHHhCC--cEEEEeEEEE-eccccCcccEEEEEcC-Cc
Q psy9583 459 ----SFFEYGINTQNVTLNLQKMLER--KNNIIKKNNSGILFLFKKNK--IKFFHGHAIF-TGKIQNNFHEIQIINK-TK 528 (866)
Q Consensus 459 ----~~~~~gi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g--V~v~~g~~v~-~~~~~~~~~~v~v~~~-~g 528 (866)
.+..+++..... +-..+..+ ...++......+...+...| +.++.+..+. +.. ....+.+.+. ++
T Consensus 76 ~~~~~~~~~g~~~~~l--~~~~f~PR~l~G~YL~~~f~~l~~~a~~~G~~V~v~~~~~V~~I~~---~~~g~~V~t~~gg 150 (534)
T PRK09897 76 QEDSHLQRYGVKKETL--HDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQI---TNAGVMLATNQDL 150 (534)
T ss_pred hhHHHHHhcCCcceee--cCCccCCeecchHHHHHHHHHHHHHHHHcCCeEEEEECCEEEEEEE---eCCEEEEEECCCC
Confidence 011122211000 00001100 01111111222233344555 6666664444 322 2345666653 34
Q ss_pred eEEEecEEEEecCCCCcCCCCCcCCCceEe-cch--hhhccccCCCeEEEECCcHHHHHHHHHHHhc
Q psy9583 529 ETITAKYIIIATGSKARSFPGVKFDENLIL-SNK--GALEMINVPKKLCIIGAGVIGLEIGSIWRRL 592 (866)
Q Consensus 529 ~~i~~d~lViATGs~p~~~p~~~~~~~~~~-t~~--~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~ 592 (866)
..+.+|+||+|||..+...+ . ....++ +.. ...... .+.+|+|+|.|+++++.+..|...
T Consensus 151 ~~i~aD~VVLAtGh~~p~~~--~-~~~~yi~~pw~~~~~~~i-~~~~V~I~GtGLt~iD~v~~Lt~~ 213 (534)
T PRK09897 151 PSETFDLAVIATGHVWPDEE--E-ATRTYFPSPWSGLMEAKV-DACNVGIMGTSLSGLDAAMAVAIQ 213 (534)
T ss_pred eEEEcCEEEECCCCCCCCCC--h-hhccccCCCCcchhhcCC-CCCeEEEECCCHHHHHHHHHHHhc
Confidence 78999999999997532111 1 111111 111 111111 268999999999999999888765
No 155
>cd06849 lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid dehydrogenase (BCDH), contain at least three different enzymes, 2-oxo acid dehydrogenase (E1), dihydrolipoyl acyltransferase (E2) and dihydrolipoamide dehydrogenase (E3) and play a key role in redox regulation. E2, the central component of the complex, catalyzes the transfer of the acyl group of CoA from E1 to E3 via reductive acetylation of a lipoyl group covalently attached to a lysine residue.
Probab=99.02 E-value=3e-09 Score=88.36 Aligned_cols=73 Identities=42% Similarity=0.769 Sum_probs=70.5
Q ss_pred EEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEE
Q psy9583 5 EVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALI 77 (866)
Q Consensus 5 ~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~ 77 (866)
++.+|+++....+|+|.+|+++.|+.|..|++++.+|++|+..++.+|.+|++.+..+.+|+.+..|++|+++
T Consensus 2 ~~~~~~~~~~~~~g~i~~~~~~~g~~v~~~~~l~~~~~~~~~~~i~a~~~g~v~~~~~~~g~~v~~g~~l~~~ 74 (74)
T cd06849 2 EIKMPDLGESMTEGTIVEWLVKEGDSVEEGDVLAEVETDKATVEVEAPAAGVLAKILVEEGDTVPVGQVIAVI 74 (74)
T ss_pred EEECCCCCCCCcEEEEEEEEECCCCEEcCCCEEEEEEeCCeEEEEECCCCEEEEEEeeCCcCEeCCCCEEEEC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999874
No 156
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.01 E-value=1.5e-09 Score=128.65 Aligned_cols=33 Identities=36% Similarity=0.596 Sum_probs=31.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||+|||+|.||++||..+++.|.+|+||||.
T Consensus 35 ~~DVlVVG~G~AGl~AAi~Aae~G~~VilieK~ 67 (640)
T PRK07573 35 KFDVIVVGTGLAGASAAATLGELGYNVKVFCYQ 67 (640)
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCcEEEEecC
Confidence 489999999999999999999999999999986
No 157
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=99.01 E-value=1.5e-09 Score=127.27 Aligned_cols=33 Identities=36% Similarity=0.690 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||||||+|.||++||..+++.|.+|+|+||.
T Consensus 5 ~~DVvVVG~G~AGl~AAl~Aae~G~~V~lveK~ 37 (566)
T PRK06452 5 EYDAVVIGGGLAGLMSAHEIASAGFKVAVISKV 37 (566)
T ss_pred cCcEEEECccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 489999999999999999999999999999997
No 158
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit. The terms succinate dehydrogenase and fumarate reductase may be used interchangeably in certain systems. However, a number of species have distinct complexes, with the fumarate reductase active under anaerobic conditions. This model represents the fumarate reductase flavoprotein subunit from several such species in which a distinct succinate dehydrogenase is also found. Not all bona fide fumarate reductases will be found by this model.
Probab=99.00 E-value=1.8e-09 Score=126.63 Aligned_cols=47 Identities=23% Similarity=0.280 Sum_probs=38.0
Q ss_pred CCcEEeCCCCCCCCCCEEEecccCC-C-C-------CcHHHHHHHHHHHHHHHhCC
Q psy9583 692 NNFIIVNDNCETNIPNIYAIGDVVR-G-P-------MLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 692 ~G~i~Vd~~l~Ts~~~VyA~GD~a~-~-~-------~~~~~A~~~g~~aa~~i~g~ 738 (866)
.|.|.+|+..+|++||+||+|+|++ + . .....|+-.|++|+++++..
T Consensus 357 ~GGi~~d~~~~t~i~GLyAaGe~a~~G~hGanrl~g~sl~~~~v~G~~ag~~aa~~ 412 (580)
T TIGR01176 357 MGGIETDINCETRIKGLFAVGECASVGLHGANRLGSNSLAELVVFGRRAGEAAAER 412 (580)
T ss_pred CCCeeECcCcccccCCeEeeecccccCcCCCccccchhHHHHHHHHHHHHHHHHHh
Confidence 5779999999999999999999973 2 1 23456788899999998753
No 159
>PRK08071 L-aspartate oxidase; Provisional
Probab=99.00 E-value=4.4e-09 Score=121.91 Aligned_cols=33 Identities=24% Similarity=0.412 Sum_probs=30.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||||||+|.||++||.++++ |.+|+||||.+
T Consensus 3 ~~DVlVVG~G~AGl~AAl~a~~-g~~V~lveK~~ 35 (510)
T PRK08071 3 SADVIIIGSGIAALTVAKELCH-EYNVIIITKKT 35 (510)
T ss_pred ccCEEEECccHHHHHHHHHhhc-CCCEEEEeccC
Confidence 5899999999999999999976 89999999983
No 160
>PRK07395 L-aspartate oxidase; Provisional
Probab=98.99 E-value=1.6e-09 Score=126.26 Aligned_cols=32 Identities=31% Similarity=0.590 Sum_probs=30.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||||||+|.||++||..+++ |.+|+||||.
T Consensus 9 e~DVlVVG~G~AGl~AAi~A~~-G~~V~lieK~ 40 (553)
T PRK07395 9 QFDVLVVGSGAAGLYAALCLPS-HLRVGLITKD 40 (553)
T ss_pred cCCEEEECccHHHHHHHHHhhc-CCCEEEEEcc
Confidence 5899999999999999999964 9999999997
No 161
>PRK06302 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Probab=98.99 E-value=1.3e-09 Score=103.92 Aligned_cols=61 Identities=26% Similarity=0.395 Sum_probs=58.1
Q ss_pred EEEEE-------EEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 18 ATLLN-------WHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 18 g~i~~-------w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
|++.. |+|++||.|++||+||.||+||+..+|+||.+|+|.+++++.|+.|..|++|+.++
T Consensus 88 G~~~~~~sP~~~~~v~~Gd~V~~Gq~l~~iEamK~~~eI~a~~~G~i~~i~v~~g~~V~~Gq~L~~i~ 155 (155)
T PRK06302 88 GTFYRAPSPDAPPFVEVGDTVKEGQTLCIIEAMKVMNEIEADKSGVVTEILVENGQPVEFGQPLFVIE 155 (155)
T ss_pred EEEEecCCCCCCcccCCCCEeCCCCEEEEEEecccceEEecCCCeEEEEEEcCCCCEeCCCCEEEEeC
Confidence 67765 99999999999999999999999999999999999999999999999999999874
No 162
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.99 E-value=3.9e-09 Score=124.35 Aligned_cols=33 Identities=30% Similarity=0.445 Sum_probs=31.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..||||||+|.||++||+.+++.|.+|+||||.
T Consensus 3 ~~DVlVVG~G~AGl~AAi~Aa~~G~~V~lieK~ 35 (589)
T PRK08641 3 KGKVIVVGGGLAGLMATIKAAEAGVHVDLFSLV 35 (589)
T ss_pred CccEEEECchHHHHHHHHHHHHcCCcEEEEEcc
Confidence 479999999999999999999999999999997
No 163
>PLN02815 L-aspartate oxidase
Probab=98.98 E-value=2.3e-09 Score=125.50 Aligned_cols=32 Identities=34% Similarity=0.557 Sum_probs=30.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||||||+|.||++||+.+++.| +|+|+||.
T Consensus 29 ~~DVlVVG~G~AGl~AAl~Aae~G-~VvlleK~ 60 (594)
T PLN02815 29 YFDFLVIGSGIAGLRYALEVAEYG-TVAIITKD 60 (594)
T ss_pred ccCEEEECccHHHHHHHHHHhhCC-CEEEEECC
Confidence 489999999999999999999999 99999997
No 164
>PRK06134 putative FAD-binding dehydrogenase; Reviewed
Probab=98.97 E-value=3.5e-09 Score=124.82 Aligned_cols=244 Identities=15% Similarity=0.225 Sum_probs=135.8
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceec---cccchhHHHhhHHHHHHhh---hhhh
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVG---CIPSKALLQTSHSFENVKN---SFFE 462 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g---~~P~~~~~~~~~~~~~~~~---~~~~ 462 (866)
.++||+|||+|.+|++||..+++.|.+|+||||. ..+||.|...+ |+|.+.+............ .+..
T Consensus 11 ~~~dvvvvG~G~aG~~aa~~~~~~g~~v~~iek~------~~~gg~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 84 (581)
T PRK06134 11 LECDVLVIGSGAAGLSAAVTAAWHGLKVIVVEKD------PVFGGTTAWSGGWMWIPRNPLARRAGIVEDIEQPRTYLRH 84 (581)
T ss_pred CccCEEEECcCHHHHHHHHHHHHCCCeEEEEecC------CCCCccccccCceeecCccHHhhhccccchHHHHHHHHHH
Confidence 3599999999999999999999999999999997 56888887665 5666554433222111111 0100
Q ss_pred cCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecC
Q psy9583 463 YGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATG 541 (866)
Q Consensus 463 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATG 541 (866)
.. ....+...+. .+.+.-... ..|+.+ .++++..... . ..+.....-.++|
T Consensus 85 ~~----~~~~~~~l~~----~~~~~s~~~-~~wl~~~~gv~~~~~~~--~-----------------~d~~~~~~~~~~g 136 (581)
T PRK06134 85 EL----GARYDAARID----AFLEAGPHM-VAFFERHTALRFADGNA--I-----------------PDYHGDTPGAATG 136 (581)
T ss_pred Hh----CcCCCHHHHH----HHHhccHHH-HHHHHhcCCceeeecCC--C-----------------CCCCCCCCCCCCC
Confidence 00 0011111111 111111112 234444 3555521100 0 0011111113445
Q ss_pred CCCcCC-CCCcCCCceEecchhhhccccCCCeEEEECCcHHH-HHHHHHHHhcCCcEEEEecCCcCCCc-----------
Q psy9583 542 SKARSF-PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIG-LEIGSIWRRLGSEVTILEMSSNFLNT----------- 608 (866)
Q Consensus 542 s~p~~~-p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~g-lE~A~~l~~~g~~Vtli~~~~~~l~~----------- 608 (866)
.++..+ +..+ ... .++...+...+.++.++|++.++ .+++..+...+..+.+..+..++++.
T Consensus 137 gr~~~~~~~~g---~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (581)
T PRK06134 137 GRSLIAAPFDG---REL--GALLERLRKPLRETSFMGMPIMAGADLAAFLNPTRSFRAFLHVARRFARHLIDLARHGRGM 211 (581)
T ss_pred CCeeccCCCCh---hhh--hHHHHHhccccccccccccccccHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccCCC
Confidence 443322 1111 000 13344455556777888888766 67887777766665554443332221
Q ss_pred ---ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEec-cEEEEeeccccC
Q psy9583 609 ---VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIF-DKLLIAIGRIPN 676 (866)
Q Consensus 609 ---~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~-D~vi~a~G~~p~ 676 (866)
....+...+.+.+++.|+++++++.++++..+++.+. +.+...++ ...+.+ +.||+|+|.-.+
T Consensus 212 ~~~~g~~l~~~L~~~a~~~Gv~i~~~t~v~~l~~~~g~v~GV~~~~~~~-----~~~i~a~k~VVlAtGg~~~ 279 (581)
T PRK06134 212 HLVNGNALVARLLKSAEDLGVRIWESAPARELLREDGRVAGAVVETPGG-----LQEIRARKGVVLAAGGFPH 279 (581)
T ss_pred cccCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEEECCc-----EEEEEeCCEEEEcCCCccc
Confidence 2345667888889999999999999999876655443 33433232 246788 999999986554
No 165
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases.; PDB: 2I0Z_A 3V76_A 2GQF_A.
Probab=98.97 E-value=2.4e-09 Score=119.24 Aligned_cols=146 Identities=22% Similarity=0.316 Sum_probs=73.8
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccC--CCccceec-cccchhHH-----------Hh--hHHHH
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFAL--GGTCTNVG-CIPSKALL-----------QT--SHSFE 454 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~--GG~~~~~g-~~P~~~~~-----------~~--~~~~~ 454 (866)
|||+|||||||||.||..|++.|.+|+|+||++.+..+-.. +|.|.... ......+. .. .....
T Consensus 1 ydviIIGgGaAGl~aA~~aa~~g~~V~vlE~~~~~gkKil~tG~GrCN~tn~~~~~~~~~~~~~~~~~f~~~~l~~f~~~ 80 (409)
T PF03486_consen 1 YDVIIIGGGAAGLMAAITAAEKGARVLVLERNKRVGKKILITGNGRCNLTNLNIDPSEFLSGYGRNPKFLKSALKRFSPE 80 (409)
T ss_dssp -SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS-HHHHHCGGGT-EEEETTSSGGGEECS-TBTTTCTHHHHHHS-HH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCcccccceeecCCCCccccccccchhhHhhhcccchHHHHHHHhcCCHH
Confidence 79999999999999999999999999999998443222221 37775444 21111111 00 01122
Q ss_pred HHhhhhhhcCcccccc----ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCce
Q psy9583 455 NVKNSFFEYGINTQNV----TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKE 529 (866)
Q Consensus 455 ~~~~~~~~~gi~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~ 529 (866)
.+..++.+.|++.... .+.... . ...+.+.+...+++.||+++.++.+. +.. .+...+.|.++++.
T Consensus 81 d~~~ff~~~Gv~~~~~~~gr~fP~s~---~----a~~Vv~~L~~~l~~~gv~i~~~~~V~~i~~--~~~~~f~v~~~~~~ 151 (409)
T PF03486_consen 81 DLIAFFEELGVPTKIEEDGRVFPKSD---K----ASSVVDALLEELKRLGVEIHFNTRVKSIEK--KEDGVFGVKTKNGG 151 (409)
T ss_dssp HHHHHHHHTT--EEE-STTEEEETT---------HHHHHHHHHHHHHHHT-EEE-S--EEEEEE--ETTEEEEEEETTTE
T ss_pred HHHHHHHhcCCeEEEcCCCEECCCCC---c----HHHHHHHHHHHHHHcCCEEEeCCEeeeeee--cCCceeEeeccCcc
Confidence 3444566677753211 111110 1 12223345666788899999998877 321 12244777765668
Q ss_pred EEEecEEEEecCCCCc
Q psy9583 530 TITAKYIIIATGSKAR 545 (866)
Q Consensus 530 ~i~~d~lViATGs~p~ 545 (866)
.+.+|+||||||+..+
T Consensus 152 ~~~a~~vILAtGG~S~ 167 (409)
T PF03486_consen 152 EYEADAVILATGGKSY 167 (409)
T ss_dssp EEEESEEEE----SSS
T ss_pred cccCCEEEEecCCCCc
Confidence 9999999999997643
No 166
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=98.97 E-value=1.7e-09 Score=124.24 Aligned_cols=63 Identities=25% Similarity=0.464 Sum_probs=61.1
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEec
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~ 79 (866)
.|+|++|+|++||.|++||+|++||+||++.+|+||.+|+|.++++++|+.|.+|++|+.|+.
T Consensus 533 ~G~V~~~~V~~Gd~V~~Gq~L~~iEamKme~eV~AP~~GvV~~i~v~~Gd~V~~G~~L~~I~~ 595 (596)
T PRK14042 533 PGSIIAIHVSAGDEVKAGQAVLVIEAMKMETEIKAPANGVVAEILCQKGDKVTPGQVLIRVEV 595 (596)
T ss_pred ceEEEEEEeCCCCEeCCCCEEEEEEecceeeEEecCCCeEEEEEEeCCcCEECCCCEEEEEeC
Confidence 499999999999999999999999999999999999999999999999999999999999963
No 167
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Probab=98.96 E-value=2.4e-09 Score=126.55 Aligned_cols=33 Identities=45% Similarity=0.866 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||||||+|.||++||..+++.|.+|+||||.
T Consensus 50 ~~DVlVIG~G~AGl~AAl~Aae~G~~VilveK~ 82 (635)
T PLN00128 50 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 82 (635)
T ss_pred ecCEEEECccHHHHHHHHHHHhcCCcEEEEEcC
Confidence 489999999999999999999999999999997
No 168
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase.
Probab=98.95 E-value=3.1e-09 Score=125.42 Aligned_cols=32 Identities=38% Similarity=0.621 Sum_probs=30.6
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
||||||+|.||++||..+++.|.+|+||||..
T Consensus 1 DVlVVG~G~AGl~AA~~aae~G~~V~lleK~~ 32 (566)
T TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGLNTAVISKVY 32 (566)
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 79999999999999999999999999999973
No 169
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Probab=98.95 E-value=3.4e-09 Score=125.25 Aligned_cols=33 Identities=45% Similarity=0.914 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||||||||.||++||+.+++.|.+|+|+||.
T Consensus 29 ~~DVlVIG~G~AGl~AAi~Aa~~G~~V~lveK~ 61 (617)
T PTZ00139 29 TYDAVVVGAGGAGLRAALGLVELGYKTACISKL 61 (617)
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCcEEEEecc
Confidence 589999999999999999999999999999997
No 170
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.95 E-value=2.6e-09 Score=125.78 Aligned_cols=33 Identities=24% Similarity=0.549 Sum_probs=30.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCC--CeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG--FKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~ 422 (866)
++||+|||||.||++||+++++.| .+|+|+||.
T Consensus 3 ~~DVlVIG~G~AGl~AAi~aa~~g~g~~V~vleK~ 37 (575)
T PRK05945 3 EHDVVIVGGGLAGCRAALEIKRLDPSLDVAVVAKT 37 (575)
T ss_pred cccEEEECccHHHHHHHHHHHHhcCCCcEEEEecc
Confidence 589999999999999999999874 899999997
No 171
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.94 E-value=7.1e-09 Score=122.32 Aligned_cols=35 Identities=23% Similarity=0.503 Sum_probs=32.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCC---CeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLG---FKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g---~~V~liek~~ 423 (866)
.++||+|||||.||++||..+++.| .+|+|+||..
T Consensus 4 ~~~DVlVVG~G~AGl~AA~~Aa~~G~~~~~V~lleK~~ 41 (577)
T PRK06069 4 LKYDVVIVGSGLAGLRAAVAAAERSGGKLSVAVVSKTQ 41 (577)
T ss_pred eecCEEEECccHHHHHHHHHHHHhCCCCCcEEEEEccc
Confidence 3589999999999999999999998 8999999973
No 172
>PRK08626 fumarate reductase flavoprotein subunit; Provisional
Probab=98.93 E-value=5.4e-09 Score=124.16 Aligned_cols=34 Identities=35% Similarity=0.434 Sum_probs=32.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||||||||.||++||..+++.|.+|+|+||.+
T Consensus 5 ~~DVlVIG~G~AGl~AAi~Aae~G~~VivleK~~ 38 (657)
T PRK08626 5 YTDALVIGAGLAGLRVAIAAAQRGLDTIVLSLVP 38 (657)
T ss_pred eccEEEECccHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4899999999999999999999999999999973
No 173
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.93 E-value=5.8e-09 Score=123.13 Aligned_cols=33 Identities=45% Similarity=0.857 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||||||||.||++||+.+++.|.+|+|+||.
T Consensus 12 ~~DVvVIG~G~AGl~AAl~Aa~~G~~V~lveK~ 44 (598)
T PRK09078 12 KYDVVVVGAGGAGLRATLGMAEAGLKTACITKV 44 (598)
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCcEEEEEcc
Confidence 589999999999999999999999999999997
No 174
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.92 E-value=4.6e-09 Score=124.47 Aligned_cols=34 Identities=35% Similarity=0.576 Sum_probs=32.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||||||+|.||++||..+++.|.+|+||||..
T Consensus 8 ~~DVvVIG~G~AGl~AAl~Aae~G~~V~lieK~~ 41 (626)
T PRK07803 8 SYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSL 41 (626)
T ss_pred eecEEEECcCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 4899999999999999999999999999999973
No 175
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes.
Probab=98.89 E-value=1.7e-08 Score=119.02 Aligned_cols=46 Identities=20% Similarity=0.170 Sum_probs=36.2
Q ss_pred CCcEEeCCCCCCCCCCEEEecccCCCC----C----cHHHHHHHHHHHHHHHhC
Q psy9583 692 NNFIIVNDNCETNIPNIYAIGDVVRGP----M----LAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 692 ~G~i~Vd~~l~Ts~~~VyA~GD~a~~~----~----~~~~A~~~g~~aa~~i~g 737 (866)
.|.|.+|...+|++||+||+|+|+++. . ....+.-.|++|++++..
T Consensus 370 ~gG~~~d~~~~t~i~gL~a~Ge~~~~~hg~nrl~~~sl~~~~v~g~~Ag~~aa~ 423 (603)
T TIGR01811 370 MGGLWVDYDQMTNIPGLFAAGECDFSQHGANRLGANSLLSAIADGYFALPFTIP 423 (603)
T ss_pred CCCeeECCCCcccCCCEEECcccccCcCCCccchhHHHHHHHHHHHHHHHHHHH
Confidence 477999999999999999999997532 2 234567778888888764
No 176
>TIGR00136 gidA glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137).
Probab=98.88 E-value=7.2e-08 Score=110.52 Aligned_cols=32 Identities=44% Similarity=0.612 Sum_probs=30.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|||+|||||+||+.||..+++.|.+|+|+|+.
T Consensus 1 yDViVIGaG~AGl~aA~ala~~G~~v~Lie~~ 32 (617)
T TIGR00136 1 FDVIVIGGGHAGCEAALAAARMGAKTLLLTLN 32 (617)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCEEEEecc
Confidence 69999999999999999999999999999986
No 177
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.85 E-value=2.1e-08 Score=118.25 Aligned_cols=33 Identities=39% Similarity=0.733 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||||||+|.||++||+.+++.|.+|+||||.
T Consensus 12 ~~DVlVIG~G~AGl~AAi~Aa~~G~~V~vleK~ 44 (591)
T PRK07057 12 KFDVVIVGAGGSGMRASLQLARAGLSVAVLSKV 44 (591)
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 589999999999999999999999999999997
No 178
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit. Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase.
Probab=98.84 E-value=3.3e-06 Score=93.45 Aligned_cols=136 Identities=18% Similarity=0.215 Sum_probs=90.3
Q ss_pred cCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEee
Q psy9583 592 LGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAI 671 (866)
Q Consensus 592 ~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~ 671 (866)
.|+.|.-+-..+.- -....+.+.+.+.+++.|++++.++.|.++..+++.+....+. ++. ...+.+|.+|+|+
T Consensus 246 ~g~~v~E~ptlPPS--v~G~RL~~aL~~~~~~~Gg~il~g~~V~~i~~~~~~v~~V~t~-~g~----~~~l~AD~vVLAa 318 (419)
T TIGR03378 246 TGLTLCELPTMPPS--LLGIRLEEALKHRFEQLGGVMLPGDRVLRAEFEGNRVTRIHTR-NHR----DIPLRADHFVLAS 318 (419)
T ss_pred HCCCEEeCCCCCCC--CcHHHHHHHHHHHHHHCCCEEEECcEEEEEEeeCCeEEEEEec-CCc----cceEECCEEEEcc
Confidence 46666654332221 2356778889999999999999999999998777766643322 321 1379999999999
Q ss_pred ccc-cCCCCC-Cc----c-ccCeee--------------------cCCCcEEeCCCCCC-----CCCCEEEecccCCCCC
Q psy9583 672 GRI-PNTNNL-NI----D-KIGLKV--------------------NENNFIIVNDNCET-----NIPNIYAIGDVVRGPM 719 (866)
Q Consensus 672 G~~-p~~~~l-~l----~-~~gl~~--------------------~~~G~i~Vd~~l~T-----s~~~VyA~GD~a~~~~ 719 (866)
|.- ... ++ .+ | -.++.+ ..-| |.+|++||. ..+|+||+|-+.+++.
T Consensus 319 Gaw~S~g-L~a~l~~i~Epif~L~v~~~~~r~~W~~~~ff~~~p~~~~G-V~~d~~lrp~~~g~~~~Nl~a~G~vL~G~d 396 (419)
T TIGR03378 319 GSFFSNG-LVAEFDKIYEPIFGLDVLQLPDRDQWYQHRFFAPHPFMQFG-VKTDAQLRPSRGGQTIENLYAIGAVLGGYD 396 (419)
T ss_pred CCCcCHH-HHhhcCceeeeccCCCcCCCcchhhhcchhhcCCChhhhcC-ceEccccCccCCCcccccceEechhhcCCC
Confidence 976 321 10 00 0 001111 1123 889999983 3899999999998764
Q ss_pred c------HHHHHHHHHHHHHHHh
Q psy9583 720 L------AHKAEEEGIMVAEHIS 736 (866)
Q Consensus 720 ~------~~~A~~~g~~aa~~i~ 736 (866)
. .-.|+..|..||++|+
T Consensus 397 ~~~~gcG~GVai~Ta~~aa~~i~ 419 (419)
T TIGR03378 397 PIFEGCGSGVAVSTALHAAEQII 419 (419)
T ss_pred hHhcCCCchhHHHHHHHHHHhhC
Confidence 2 3478888888988873
No 179
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=98.83 E-value=2.5e-08 Score=117.37 Aligned_cols=33 Identities=36% Similarity=0.615 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||||||+|.||++||.++++.|.+|+|+||.
T Consensus 7 ~~DVlVVG~G~AGl~AAi~Aa~~G~~V~lleK~ 39 (588)
T PRK08958 7 EFDAVVIGAGGAGMRAALQISQSGQSCALLSKV 39 (588)
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCcEEEEEcc
Confidence 489999999999999999999999999999997
No 180
>PRK07512 L-aspartate oxidase; Provisional
Probab=98.82 E-value=3.9e-08 Score=114.22 Aligned_cols=47 Identities=28% Similarity=0.370 Sum_probs=36.4
Q ss_pred CCcEEeCCCCCCCCCCEEEecccCC-CC----Cc----HHHHHHHHHHHHHHHhCC
Q psy9583 692 NNFIIVNDNCETNIPNIYAIGDVVR-GP----ML----AHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 692 ~G~i~Vd~~l~Ts~~~VyA~GD~a~-~~----~~----~~~A~~~g~~aa~~i~g~ 738 (866)
.|+|.||...+|++||+||+|+|++ +. .+ ...+.-.|++|++++...
T Consensus 341 ~GGi~vd~~~~t~I~GLyAaGE~a~~G~hGanrl~gnsl~~~~v~G~~ag~~aa~~ 396 (513)
T PRK07512 341 MGGIAVDADGRSSLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGT 396 (513)
T ss_pred cCCEEECCCCccccCCEEecccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4779999999999999999999973 22 12 345667789999988654
No 181
>TIGR02712 urea_carbox urea carboxylase. Members of this family are ATP-dependent urea carboxylase, including characterized members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae. The allophanate hydrolase domain of the yeast enzyme is not included in this model and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from Oleomonas sagaranensis was shown to be highly active on acetamide and formamide as well as urea.
Probab=98.82 E-value=8.6e-09 Score=128.95 Aligned_cols=62 Identities=21% Similarity=0.405 Sum_probs=60.5
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|.+|+|++||.|++||+|++|||||++++|+||.+|+|.++++++|+.|.+|++|+.|+
T Consensus 1140 ~G~v~~~~v~~Gd~V~~Gd~l~~iEsmK~~~~v~ap~~G~v~~i~~~~G~~V~~G~~l~~i~ 1201 (1201)
T TIGR02712 1140 AGNFWKVLVEVGDRVEAGQPLVILEAMKMEMPVSAPVAGKVTKILCQPGDMVDAGDIVAVLE 1201 (1201)
T ss_pred eEEEEEEEeCCCCEECCCCEEEEEEecCeeEEEEcCCCEEEEEEEeCCCCEeCCCCEEEEeC
Confidence 59999999999999999999999999999999999999999999999999999999999875
No 182
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=98.77 E-value=1.2e-08 Score=117.99 Aligned_cols=58 Identities=26% Similarity=0.421 Sum_probs=56.4
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEE
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVI 74 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l 74 (866)
.|+|++|+|++||.|++||+|++||+||++++|.||.+|+|.++++++|+.|.+|++|
T Consensus 525 ~G~v~~~~V~~Gd~V~~G~~l~~iEamKme~~i~ap~~G~V~~i~v~~Gd~V~~G~~l 582 (582)
T TIGR01108 525 AGSIVKVKVSEGQTVAEGEVLLILEAMKMETEIKAAAAGTVREILVKVGDAVSVGQVL 582 (582)
T ss_pred cEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCCEeCCCCCC
Confidence 4999999999999999999999999999999999999999999999999999999975
No 183
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated
Probab=98.76 E-value=3.2e-08 Score=113.66 Aligned_cols=145 Identities=19% Similarity=0.280 Sum_probs=76.4
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhh-------hhh
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKN-------SFF 461 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~-------~~~ 461 (866)
.+|||+|||||+||+.||..+++.|.+|+|||+.. ..+|+. +|.|+.......+..+.+.. ...
T Consensus 3 ~~yDVIVVGGGpAG~eAA~~aAR~G~kV~LiE~~~-----d~iG~m----~CnpsiGG~akg~lvrEidalGg~~g~~~d 73 (618)
T PRK05192 3 EEYDVIVVGGGHAGCEAALAAARMGAKTLLLTHNL-----DTIGQM----SCNPAIGGIAKGHLVREIDALGGEMGKAID 73 (618)
T ss_pred ccceEEEECchHHHHHHHHHHHHcCCcEEEEeccc-----cccccc----CCccccccchhhHHHHHHHhcCCHHHHHHh
Confidence 35999999999999999999999999999999862 245542 34443332222222221110 011
Q ss_pred hcCccccccccCH-HHHH-HHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEE
Q psy9583 462 EYGINTQNVTLNL-QKML-ERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIII 538 (866)
Q Consensus 462 ~~gi~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lVi 538 (866)
..++........- .... .+.+-....+...+...+++ .+++++.+.+..+.. .+....-|.+.+|..+.++.||+
T Consensus 74 ~~giq~r~ln~skGpAV~s~RaQiDr~ly~kaL~e~L~~~~nV~I~q~~V~~Li~--e~grV~GV~t~dG~~I~Ak~VIl 151 (618)
T PRK05192 74 KTGIQFRMLNTSKGPAVRALRAQADRKLYRAAMREILENQPNLDLFQGEVEDLIV--ENGRVVGVVTQDGLEFRAKAVVL 151 (618)
T ss_pred hccCceeecccCCCCceeCcHHhcCHHHHHHHHHHHHHcCCCcEEEEeEEEEEEe--cCCEEEEEEECCCCEEECCEEEE
Confidence 1111110000000 0000 00000011122333344444 489988776554322 11222335556678899999999
Q ss_pred ecCCCC
Q psy9583 539 ATGSKA 544 (866)
Q Consensus 539 ATGs~p 544 (866)
|||...
T Consensus 152 ATGTFL 157 (618)
T PRK05192 152 TTGTFL 157 (618)
T ss_pred eeCcch
Confidence 999753
No 184
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=98.76 E-value=2e-08 Score=116.16 Aligned_cols=62 Identities=21% Similarity=0.350 Sum_probs=60.1
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|++|+|++||.|++||+|+++|+||+..+|.||.+|+|.++++++|+.|..|++|+.+.
T Consensus 532 ~G~I~~~~V~~Gd~V~~Gd~l~~iEamKme~~I~Ap~~G~V~~i~v~~Gd~V~~G~~L~~I~ 593 (593)
T PRK14040 532 AGNIFKVIVTEGQTVAEGDVLLILEAMKMETEIRAAQAGTVRGIAVKEGDAVAVGDTLLTLA 593 (593)
T ss_pred cEEEEEEEeCCCCEeCCCCEEEEEecCceeEEEEcCCCEEEEEEEeCCCCEECCCCEEEEeC
Confidence 58999999999999999999999999999999999999999999999999999999999873
No 185
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional
Probab=98.75 E-value=5.3e-08 Score=102.19 Aligned_cols=137 Identities=25% Similarity=0.302 Sum_probs=75.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceecc-ccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGC-IPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~-~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++||+||||||||++||++|++.|++|+|+|+. ..+||.+...+. .+.... .......+..++++..
T Consensus 25 ~~DVvIVGgGpAGl~AA~~la~~G~~V~liEk~------~~~Ggg~~~gg~~~~~~~v------~~~~~~~l~~~gv~~~ 92 (257)
T PRK04176 25 EVDVAIVGAGPSGLTAAYYLAKAGLKVAVFERK------LSFGGGMWGGGMLFNKIVV------QEEADEILDEFGIRYK 92 (257)
T ss_pred cCCEEEECccHHHHHHHHHHHhCCCeEEEEecC------CCCCCccccCccccccccc------hHHHHHHHHHCCCCce
Confidence 589999999999999999999999999999997 455543221111 111111 0111222445555532
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccC-cccEEEEEc---------CCceEEEecEEE
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQN-NFHEIQIIN---------KTKETITAKYII 537 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~-~~~~v~v~~---------~~g~~i~~d~lV 537 (866)
.....+.. . .. ..+...+.....+.|++++.++.+. +...+. ....+.+.. .+..++.++.||
T Consensus 93 ~~~~g~~~-v-d~----~~l~~~L~~~A~~~Gv~I~~~t~V~dl~~~~~g~V~Gvv~~~~~v~~~g~~~~~~~i~Ak~VI 166 (257)
T PRK04176 93 EVEDGLYV-A-DS----VEAAAKLAAAAIDAGAKIFNGVSVEDVILREDPRVAGVVINWTPVEMAGLHVDPLTIEAKAVV 166 (257)
T ss_pred eecCccee-c-cH----HHHHHHHHHHHHHcCCEEEcCceeceeeEeCCCcEEEEEEccccccccCCCCCcEEEEcCEEE
Confidence 21111000 0 01 1222334555677899999887655 211111 111222210 123579999999
Q ss_pred EecCCCC
Q psy9583 538 IATGSKA 544 (866)
Q Consensus 538 iATGs~p 544 (866)
+|||...
T Consensus 167 ~ATG~~a 173 (257)
T PRK04176 167 DATGHDA 173 (257)
T ss_pred EEeCCCc
Confidence 9999653
No 186
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=98.71 E-value=3e-08 Score=122.71 Aligned_cols=67 Identities=16% Similarity=0.456 Sum_probs=62.2
Q ss_pred CCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 11 LSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 11 ~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
++..| .|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|+
T Consensus 1077 I~a~~-~G~v~~~~v~~Gd~V~~Gd~L~~iEamKm~~~I~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1143 (1143)
T TIGR01235 1077 VGAPM-PGVIIEVKVSSGQAVNKGDPLVVLEAMKMETAIQAPKDGTIKEVLVKAGEQIDAKDLLLVLE 1143 (1143)
T ss_pred eecCC-CcEEEEEEeCCCCEeCCCCEEEEEEecceeEEEecCCCEEEEEEEeCCCCEECCCCEEEEeC
Confidence 33443 49999999999999999999999999999999999999999999999999999999999874
No 187
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
Probab=98.67 E-value=9.3e-08 Score=107.79 Aligned_cols=138 Identities=18% Similarity=0.257 Sum_probs=75.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHh---hH--HHHHHhhhhhhcC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQT---SH--SFENVKNSFFEYG 464 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~---~~--~~~~~~~~~~~~g 464 (866)
+|||+||||||||++||+.|++.|++|+|+||+ ..+|..+...+.+....+... .. .............
T Consensus 3 ~~DVvIVGaGPAGs~aA~~la~~G~~VlvlEk~------~~~G~k~~~~~~~~~~~l~~l~~~~~~~i~~~v~~~~~~~~ 76 (396)
T COG0644 3 EYDVVIVGAGPAGSSAARRLAKAGLDVLVLEKG------SEPGAKPCCGGGLSPRALEELIPDFDEEIERKVTGARIYFP 76 (396)
T ss_pred eeeEEEECCchHHHHHHHHHHHcCCeEEEEecC------CCCCCCccccceechhhHHHhCCCcchhhheeeeeeEEEec
Confidence 499999999999999999999999999999998 344432222111111111000 00 0000000000000
Q ss_pred -----cccc---ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEE
Q psy9583 465 -----INTQ---NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYI 536 (866)
Q Consensus 465 -----i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~l 536 (866)
+... ...++... +.+.+....++.|++++.++.+.....+.. ..+.....++.+++++.+
T Consensus 77 ~~~~~~~~~~~~~y~v~R~~-----------fd~~La~~A~~aGae~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~a~~v 144 (396)
T COG0644 77 GEKVAIEVPVGEGYIVDRAK-----------FDKWLAERAEEAGAELYPGTRVTGVIREDD-GVVVGVRAGDDEVRAKVV 144 (396)
T ss_pred CCceEEecCCCceEEEEhHH-----------hhHHHHHHHHHcCCEEEeceEEEEEEEeCC-cEEEEEEcCCEEEEcCEE
Confidence 0000 11111111 222355667788999999988773221112 222222233378999999
Q ss_pred EEecCCCCc
Q psy9583 537 IIATGSKAR 545 (866)
Q Consensus 537 ViATGs~p~ 545 (866)
|.|+|....
T Consensus 145 I~AdG~~s~ 153 (396)
T COG0644 145 IDADGVNSA 153 (396)
T ss_pred EECCCcchH
Confidence 999997654
No 188
>TIGR00292 thiazole biosynthesis enzyme. This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine.This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis.
Probab=98.66 E-value=1.7e-07 Score=98.02 Aligned_cols=33 Identities=39% Similarity=0.681 Sum_probs=32.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||+||||||||++||+.|++.|++|+|+||.
T Consensus 21 ~~DVvIVGgGpAGL~aA~~la~~G~~V~vlEk~ 53 (254)
T TIGR00292 21 ESDVIIVGAGPSGLTAAYYLAKNGLKVCVLERS 53 (254)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence 599999999999999999999999999999998
No 189
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=98.61 E-value=9.1e-08 Score=111.06 Aligned_cols=62 Identities=27% Similarity=0.483 Sum_probs=60.6
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|.+|+|++||.|++||+|+++|+||+..+|.||.+|+|.++++++|+.|..|++|+.++
T Consensus 530 ~G~v~~~~V~~Gd~V~~Gq~L~~ieamKme~~V~Ap~~G~V~~i~v~~G~~V~~G~~L~~i~ 591 (592)
T PRK09282 530 PGTVVKVKVKEGDKVKAGDTVLVLEAMKMENEIQAPVDGTVKEILVKEGDRVNPGDVLMEIE 591 (592)
T ss_pred cEEEEEEEeCCCCEECCCCEEEEEeccccceEEEcCCCeEEEEEEeCCCCEeCCCCEEEEec
Confidence 58999999999999999999999999999999999999999999999999999999999986
No 190
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=98.60 E-value=1e-06 Score=84.07 Aligned_cols=171 Identities=11% Similarity=0.056 Sum_probs=131.0
Q ss_pred ccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCCeeEEccceeEEEEEecCC
Q psy9583 192 NSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAISSSR 271 (866)
Q Consensus 192 ~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av~~~~ 271 (866)
..||+....+.|+|++-...++. +++++..+++|+.+++.++++|+-++.++...+++.+++.++|..++
T Consensus 27 ~~p~y~i~~~LDvtn~~~~vk~~----------~l~Ff~a~l~avtr~~n~~~EFRlr~~~~~~~~~d~v~p~~tv~~~~ 96 (219)
T COG4845 27 QYPHYDINLQLDVTNFYGYVKEN----------GLSFFPALLYAVTRCANRHQEFRLRIQNGQLGYWDNVPPMYTVFHGE 96 (219)
T ss_pred ccceEeeeeeeehhHHHHHHHHc----------CCcchHHHHHHHHHHhcccHHhHhhhcCCeeEEeecCCcceEEEcCC
Confidence 57999999999999887666543 78999999999999999999999999999999999999999999866
Q ss_pred ceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCC-c-cccCCceEEEEcCCCcCccccccccCCCc------eEEEEec
Q psy9583 272 GLVVPILRNADTMSIADIEKKINEFINKAQDNKLL-P-EEMSGGTFTISNGGVFGSMLSTPIINPPQ------SAILGVH 343 (866)
Q Consensus 272 gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~-~-~~~~~gt~tisn~g~~g~~~~~~ii~~p~------~~il~vg 343 (866)
+-..-++----+.+..++++...+-+++.+++.-. + +.-..--.-+||+.|+ .||.+-.+=+ ..|+.-|
T Consensus 97 ~e~Fs~l~~e~~~~~~dF~q~y~~~ie~~~~~~~~~~k~~~~~~~~~~s~lPWl---sFtslS~~~~~~k~~~~PiF~~G 173 (219)
T COG4845 97 TETFSVLWTEYQEDYEDFAQLYIEDIEQYGANNYERAKDPTPCDVYIFSNLPWL---SFTSLSHHYRRNKIYGQPIFYAG 173 (219)
T ss_pred CcEEEEEeccccccHHHHHHHHHHHHHHhccCcccccCCCCcceeEEecccccc---ceeeeeeeccCCccccceeEeec
Confidence 53334444446779999999999888988887532 2 2223457889999999 7777654433 2344444
Q ss_pred cceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhh
Q psy9583 344 AIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLM 383 (866)
Q Consensus 344 ~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~ 383 (866)
+-. .+||.+ .++++....|..+||-....+..
T Consensus 174 rf~----~~~Gkl----~lPlavq~hHA~vDG~Hi~~l~~ 205 (219)
T COG4845 174 RFY----EEDGKL----TLPLAVQAHHANVDGFHIGQLFD 205 (219)
T ss_pred cee----ccCCeE----EEeEEEEecccccchhhHHHHHH
Confidence 432 245554 46789999999999988765543
No 191
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]
Probab=98.58 E-value=4.6e-06 Score=86.01 Aligned_cols=123 Identities=17% Similarity=0.169 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCC----------
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNL---------- 680 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l---------- 680 (866)
-.+.+.+...+++.|.-++.+..|...+-.++.++-..+. +.. ...+.+|..++|+|.--...+.
T Consensus 258 iRl~~~L~~~f~~~Gg~~m~Gd~V~~a~~~~~~v~~i~tr-n~~----diP~~a~~~VLAsGsffskGLvae~d~I~EPI 332 (421)
T COG3075 258 IRLHNQLQRQFEQLGGLWMPGDEVKKATCKGGRVTEIYTR-NHA----DIPLRADFYVLASGSFFSKGLVAERDKIYEPI 332 (421)
T ss_pred hhHHHHHHHHHHHcCceEecCCceeeeeeeCCeEEEEEec-ccc----cCCCChhHeeeeccccccccchhhhhhhhcch
Confidence 3456778888999999999999999988877777654443 222 2367899999999853222110
Q ss_pred -CccccCe----eecC----------CCcEEeCCCCCC-----CCCCEEEecccCCCCCc------HHHHHHHHHHHHHH
Q psy9583 681 -NIDKIGL----KVNE----------NNFIIVNDNCET-----NIPNIYAIGDVVRGPML------AHKAEEEGIMVAEH 734 (866)
Q Consensus 681 -~l~~~gl----~~~~----------~G~i~Vd~~l~T-----s~~~VyA~GD~a~~~~~------~~~A~~~g~~aa~~ 734 (866)
.++-... ++.. .-++.+|+++|. ..+|+||||-+.+++.. .-+|+..|..||+.
T Consensus 333 f~ldi~~~~dR~~W~~~~ffapqp~~qfGV~tD~~lrp~~~g~~~eNL~aiGavlgGfdpi~egcGsGVaivta~~aa~q 412 (421)
T COG3075 333 FDLDILQTADRAEWYHSDFFAPQPYQQFGVTTDDTLRPSRGGQTIENLYAIGAVLGGFDPIAEGCGSGVAIVTALHAAEQ 412 (421)
T ss_pred hhcccccCcchhhhhhccccCCChhHHhCcccccccCccccchHHHHHHHHHHHhcCCcHHHhcCCcchHHHHHHHHHHH
Confidence 0000000 0000 013888888875 36899999999987643 24677788888888
Q ss_pred HhCC
Q psy9583 735 ISGQ 738 (866)
Q Consensus 735 i~g~ 738 (866)
|+..
T Consensus 413 i~~~ 416 (421)
T COG3075 413 IAER 416 (421)
T ss_pred HHHH
Confidence 7653
No 192
>PRK10157 putative oxidoreductase FixC; Provisional
Probab=98.55 E-value=5.6e-07 Score=102.37 Aligned_cols=45 Identities=33% Similarity=0.504 Sum_probs=36.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGT 434 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~ 434 (866)
+|||+||||||||++||..|++.|++|+||||.+.|......||.
T Consensus 5 ~~DViIVGaGpAG~~aA~~La~~G~~V~llEr~~~~g~k~~~gg~ 49 (428)
T PRK10157 5 IFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGR 49 (428)
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCeEEEEEcCCCCCCcccccce
Confidence 599999999999999999999999999999998544333333443
No 193
>TIGR02028 ChlP geranylgeranyl reductase. This model represents the reductase which acts reduces the geranylgeranyl group to the phytyl group in the side chain of chlorophyll. It is unclear whether the enzyme has a preference for acting before or after the attachment of the side chain to chlorophyllide a by chlorophyll synthase. This clade is restricted to plants and cyanobacteria to separate it from the homologues which act in the biosynthesis of bacteriochlorophyll.
Probab=98.54 E-value=2.1e-07 Score=104.81 Aligned_cols=141 Identities=20% Similarity=0.252 Sum_probs=75.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHh-hhhhhcC-cccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVK-NSFFEYG-INTQ 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~-~~~~~~g-i~~~ 468 (866)
+||+||||||||++||..|++.|++|+|+|+. ...+..| .+++|...+.... ...... ....... +...
T Consensus 1 ~~VvIVGaGPAG~~aA~~la~~G~~V~llE~~------~~~~~~c--g~~i~~~~l~~~g-~~~~~~~~~i~~~~~~~p~ 71 (398)
T TIGR02028 1 LRVAVVGGGPAGASAAETLASAGIQTFLLERK------PDNAKPC--GGAIPLCMVDEFA-LPRDIIDRRVTKMKMISPS 71 (398)
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecC------CCCCCCc--cccccHhhHhhcc-CchhHHHhhhceeEEecCC
Confidence 58999999999999999999999999999997 2333444 2445543322110 000000 0000000 0001
Q ss_pred ccccCHHH---------HHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEecccc--CcccEEEEEcCC-----c--eE
Q psy9583 469 NVTLNLQK---------MLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQ--NNFHEIQIINKT-----K--ET 530 (866)
Q Consensus 469 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~--~~~~~v~v~~~~-----g--~~ 530 (866)
...+++.. .+.+ ..+...+.....+.|++++.++...+.... .....+++...+ + .+
T Consensus 72 ~~~~~~~~~~~~~~~~~~v~R-----~~~d~~L~~~a~~~G~~v~~~~~~~i~~~~~~~~~~~v~~~~~~~~~~~g~~~~ 146 (398)
T TIGR02028 72 NIAVDIGRTLKEHEYIGMLRR-----EVLDSFLRRRAADAGATLINGLVTKLSLPADADDPYTLHYISSDSGGPSGTRCT 146 (398)
T ss_pred ceEEEeccCCCCCCceeeeeH-----HHHHHHHHHHHHHCCcEEEcceEEEEEeccCCCceEEEEEeeccccccCCCccE
Confidence 11111110 0111 122234555567789999888754431111 111234433221 2 57
Q ss_pred EEecEEEEecCCCCc
Q psy9583 531 ITAKYIIIATGSKAR 545 (866)
Q Consensus 531 i~~d~lViATGs~p~ 545 (866)
+++|.||.|+|..+.
T Consensus 147 i~a~~VIgADG~~S~ 161 (398)
T TIGR02028 147 LEVDAVIGADGANSR 161 (398)
T ss_pred EEeCEEEECCCcchH
Confidence 999999999998764
No 194
>PRK06847 hypothetical protein; Provisional
Probab=98.54 E-value=4.4e-07 Score=101.83 Aligned_cols=37 Identities=27% Similarity=0.430 Sum_probs=34.2
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|.+.+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 1 m~~~~~V~IVGaG~aGl~~A~~L~~~g~~v~v~E~~~ 37 (375)
T PRK06847 1 MAAVKKVLIVGGGIGGLSAAIALRRAGIAVDLVEIDP 37 (375)
T ss_pred CCCcceEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 5567899999999999999999999999999999974
No 195
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=98.53 E-value=6e-08 Score=110.22 Aligned_cols=142 Identities=23% Similarity=0.244 Sum_probs=38.8
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhH----HHhhHHHHHHhhhhhhcCccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKAL----LQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~----~~~~~~~~~~~~~~~~~gi~~ 467 (866)
||||||||+||++||+.+++.|.+|+|||+. ..+||.....+..+.... .........+...+...+-..
T Consensus 1 DVVVvGgG~aG~~AAi~AAr~G~~VlLiE~~------~~lGG~~t~~~~~~~~~~~~~~~~~~gi~~e~~~~~~~~~~~~ 74 (428)
T PF12831_consen 1 DVVVVGGGPAGVAAAIAAARAGAKVLLIEKG------GFLGGMATSGGVSPFDGNHDEDQVIGGIFREFLNRLRARGGYP 74 (428)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTS-EEEE-SS------SSSTGGGGGSSS-EETTEEHHHHHHHHHHHHHHHST-------
T ss_pred CEEEECccHHHHHHHHHHHHCCCEEEEEECC------ccCCCcceECCcCChhhcchhhccCCCHHHHHHHHHhhhcccc
Confidence 8999999999999999999999999999998 678887755543321111 111222222222222111000
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc-eEEEecEEEEecCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK-ETITAKYIIIATGS 542 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs 542 (866)
......|....... ...+...+..++.+.|+++++++.+. +...+.....+.+.+.+| .++.++.+|-|||-
T Consensus 75 ~~~~~~~~~~~~~~---~~~~~~~l~~~l~e~gv~v~~~t~v~~v~~~~~~i~~V~~~~~~g~~~i~A~~~IDaTG~ 148 (428)
T PF12831_consen 75 QEDRYGWVSNVPFD---PEVFKAVLDEMLAEAGVEVLLGTRVVDVIRDGGRITGVIVETKSGRKEIRAKVFIDATGD 148 (428)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred cccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00011111000000 11222345566778899999998876 322111224455544333 78999999999994
No 196
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]
Probab=98.52 E-value=6.8e-07 Score=103.39 Aligned_cols=36 Identities=39% Similarity=0.594 Sum_probs=33.5
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
..++||||||||.|||.||..+++.|.+|+|+||..
T Consensus 4 ~~~~DvvVIG~G~AGl~AAi~aa~~g~~V~l~~K~~ 39 (562)
T COG1053 4 IHEFDVVVIGGGGAGLRAAIEAAEAGLKVALLSKAP 39 (562)
T ss_pred cccCCEEEECCcHHHHHHHHHHHhcCCcEEEEEccc
Confidence 346999999999999999999999999999999973
No 197
>COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]
Probab=98.52 E-value=1.7e-07 Score=102.63 Aligned_cols=62 Identities=27% Similarity=0.445 Sum_probs=60.5
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|+...|++|++|.+||+|+.+|.|||+..|.||.+|+|.++.+.+|+.|..|++|+.++
T Consensus 583 pG~v~~v~V~~G~~V~~G~~lvvlEAMKME~~l~A~~dG~V~~v~v~~Gd~V~~g~vLve~~ 644 (645)
T COG4770 583 PGTVVSVAVKEGQEVSAGDLLVVLEAMKMENTLRAPRDGVVAKLAVAEGDQVAVGTVLVEFE 644 (645)
T ss_pred CceEEEEEecCCCEecCCCeEEEeEehhcccceecCcCcEEEEEEecCCCccccCceEEEec
Confidence 49999999999999999999999999999999999999999999999999999999999986
No 198
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=98.51 E-value=8.1e-07 Score=100.30 Aligned_cols=36 Identities=22% Similarity=0.453 Sum_probs=33.3
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
...+||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 4 ~~~~dV~IvGaG~aGl~~A~~La~~G~~v~liE~~~ 39 (392)
T PRK08773 4 RSRRDAVIVGGGVVGAACALALADAGLSVALVEGRE 39 (392)
T ss_pred CCCCCEEEECcCHHHHHHHHHHhcCCCEEEEEeCCC
Confidence 346899999999999999999999999999999974
No 199
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
Probab=98.50 E-value=1.3e-06 Score=85.14 Aligned_cols=33 Identities=42% Similarity=0.687 Sum_probs=31.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..||+|||+||+||+||++|++.|++|+|||++
T Consensus 30 esDViIVGaGPsGLtAAyyLAk~g~kV~i~E~~ 62 (262)
T COG1635 30 ESDVIIVGAGPSGLTAAYYLAKAGLKVAIFERK 62 (262)
T ss_pred hccEEEECcCcchHHHHHHHHhCCceEEEEEee
Confidence 379999999999999999999999999999997
No 200
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=98.49 E-value=8.4e-07 Score=95.80 Aligned_cols=33 Identities=39% Similarity=0.753 Sum_probs=31.6
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|||+|||||++|+++|..|++.|.+|+|||+.+
T Consensus 1 ~dv~IiGaG~aGl~~A~~l~~~g~~v~vie~~~ 33 (295)
T TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKS 33 (295)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 699999999999999999999999999999984
No 201
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K.
Probab=98.47 E-value=9.9e-07 Score=86.83 Aligned_cols=132 Identities=27% Similarity=0.325 Sum_probs=65.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHH-hhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQ-TSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~-~~~~~~~~~~~~~~~gi~~~ 468 (866)
++||+||||||+|++||+.|++.|++|++||++ ..+||....-|..-++...+ .+.. .+.++|++..
T Consensus 17 ~~DV~IVGaGpaGl~aA~~La~~g~kV~v~E~~------~~~GGg~~~Gg~lf~~iVVq~~a~~------iL~elgi~y~ 84 (230)
T PF01946_consen 17 EYDVAIVGAGPAGLTAAYYLAKAGLKVAVIERK------LSPGGGMWGGGMLFNKIVVQEEADE------ILDELGIPYE 84 (230)
T ss_dssp EESEEEE--SHHHHHHHHHHHHHTS-EEEEESS------SS-BTTTTS-CTT---EEEETTTHH------HHHHHT---E
T ss_pred cCCEEEECCChhHHHHHHHHHHCCCeEEEEecC------CCCCccccccccccchhhhhhhHHH------HHHhCCceeE
Confidence 599999999999999999999999999999997 45655432222222222111 1111 1444555543
Q ss_pred ccc-----cCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-e-ccccCcccEEEEE-c---C-----CceEEE
Q psy9583 469 NVT-----LNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-T-GKIQNNFHEIQII-N---K-----TKETIT 532 (866)
Q Consensus 469 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~-~~~~~~~~~v~v~-~---~-----~g~~i~ 532 (866)
+.. .+-..+. ..+....-+.|+.++....+. + -..+..-..+.+. + . |-..++
T Consensus 85 ~~~~g~~v~d~~~~~-----------s~L~s~a~~aGakifn~~~vEDvi~r~~~rV~GvViNWt~V~~~glHvDPl~i~ 153 (230)
T PF01946_consen 85 EYGDGYYVADSVEFT-----------STLASKAIDAGAKIFNLTSVEDVIVREDDRVAGVVINWTPVEMAGLHVDPLTIR 153 (230)
T ss_dssp E-SSEEEES-HHHHH-----------HHHHHHHHTTTEEEEETEEEEEEEEECSCEEEEEEEEEHHHHTT--T-B-EEEE
T ss_pred EeCCeEEEEcHHHHH-----------HHHHHHHhcCCCEEEeeeeeeeeEEEcCCeEEEEEEEehHHhHhhcCCCcceEE
Confidence 211 1111111 112223345899998887766 1 1110011112221 1 1 225899
Q ss_pred ecEEEEecCCCC
Q psy9583 533 AKYIIIATGSKA 544 (866)
Q Consensus 533 ~d~lViATGs~p 544 (866)
++.+|=|||...
T Consensus 154 ak~ViDaTGHda 165 (230)
T PF01946_consen 154 AKVVIDATGHDA 165 (230)
T ss_dssp ESEEEE---SSS
T ss_pred EeEEEeCCCCch
Confidence 999999999643
No 202
>PLN02661 Putative thiazole synthesis
Probab=98.47 E-value=6.7e-07 Score=96.08 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=73.9
Q ss_pred ccceeeecCCccHHHHHHHHHHC-CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++||+|||||++|+.||+.|++. |++|+|||+. ..+||.+...|........... ....+.++|++..
T Consensus 92 ~~DVlIVGaG~AGl~AA~~La~~~g~kV~viEk~------~~~GGG~~~gg~l~~~~vv~~~-----a~e~LeElGV~fd 160 (357)
T PLN02661 92 DTDVVIVGAGSAGLSCAYELSKNPNVKVAIIEQS------VSPGGGAWLGGQLFSAMVVRKP-----AHLFLDELGVPYD 160 (357)
T ss_pred cCCEEEECCHHHHHHHHHHHHHcCCCeEEEEecC------cccccceeeCcccccccccccH-----HHHHHHHcCCCcc
Confidence 58999999999999999999986 8999999997 4555432222211111111111 1122455676653
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEE------Ec-CC-----ceEEEecE
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQI------IN-KT-----KETITAKY 535 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v------~~-~~-----g~~i~~d~ 535 (866)
.. -++... .+...+. ...+....++.+++++.++.+. +-..+.....+.+ .. .+ ...+.+++
T Consensus 161 ~~-dgy~vv-~ha~e~~---stLi~ka~~~~gVkI~~~t~V~DLI~~~grVaGVVvnw~~v~~~~~~~s~~dp~~I~Aka 235 (357)
T PLN02661 161 EQ-ENYVVI-KHAALFT---STIMSKLLARPNVKLFNAVAAEDLIVKGDRVGGVVTNWALVAQNHDTQSCMDPNVMEAKV 235 (357)
T ss_pred cC-CCeeEe-cchHHHH---HHHHHHHHhcCCCEEEeCeEeeeEEecCCEEEEEEeecchhhhccCCCCccceeEEECCE
Confidence 22 011000 0101111 1112234455789999887755 2111111122222 11 11 13689999
Q ss_pred EEEecCCCC
Q psy9583 536 IIIATGSKA 544 (866)
Q Consensus 536 lViATGs~p 544 (866)
+|+|||...
T Consensus 236 VVlATGh~g 244 (357)
T PLN02661 236 VVSSCGHDG 244 (357)
T ss_pred EEEcCCCCC
Confidence 999999653
No 203
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only]
Probab=98.47 E-value=1.7e-05 Score=86.03 Aligned_cols=45 Identities=29% Similarity=0.327 Sum_probs=41.2
Q ss_pred cEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC
Q psy9583 694 FIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 694 ~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
.+.+|+.+.|+.+|+|++||+++..+-...|...|..+|+.|+.+
T Consensus 438 ri~~d~~~~t~i~gLy~aGdGAG~argI~~Aaa~Gi~~A~~i~~k 482 (486)
T COG2509 438 RIKVDEDLSTSIKGLYPAGDGAGLARGIVSAAADGIKAAEGIARK 482 (486)
T ss_pred eEeecccceeeecceEEccccccccchhHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999998888999999999999998743
No 204
>PRK10015 oxidoreductase; Provisional
Probab=98.47 E-value=4.1e-07 Score=103.37 Aligned_cols=45 Identities=33% Similarity=0.533 Sum_probs=36.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGT 434 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~ 434 (866)
+|||+||||||||++||+.|++.|++|+||||.+.|......||.
T Consensus 5 ~~DViIVGgGpAG~~aA~~LA~~G~~VlliEr~~~~g~k~~~gg~ 49 (429)
T PRK10015 5 KFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGR 49 (429)
T ss_pred ccCEEEECcCHHHHHHHHHHHhCCCeEEEEecCCCCCcccccCce
Confidence 599999999999999999999999999999998544333333443
No 205
>PRK12999 pyruvate carboxylase; Reviewed
Probab=98.46 E-value=3.6e-07 Score=113.93 Aligned_cols=62 Identities=23% Similarity=0.421 Sum_probs=60.5
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|++|+|++||.|++||+|+.+|+||+..+|.||.+|+|.++++++|+.|..|++|+.++
T Consensus 1084 ~G~v~~i~v~~Gd~V~~G~~L~~leamKme~~i~Ap~~G~V~~i~v~~g~~V~~g~~l~~i~ 1145 (1146)
T PRK12999 1084 PGSVVTVLVKEGDEVKAGDPLAVIEAMKMETTITAPVDGTVKRVLVKAGDQVEAGDLLVELE 1145 (1146)
T ss_pred eEEEEEEEcCCCCEECCCCEEEEEEccccceEEecCCCEEEEEEEeCCCCEECCCCEEEEEc
Confidence 49999999999999999999999999999999999999999999999999999999999986
No 206
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=98.45 E-value=1.2e-06 Score=96.42 Aligned_cols=34 Identities=32% Similarity=0.286 Sum_probs=31.8
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
.||+|||||++|+.||+.|++.|++|+|||+.+.
T Consensus 3 ~dVvVIGGGlAGleAAlaLAr~Gl~V~LiE~rp~ 36 (436)
T PRK05335 3 KPVNVIGAGLAGSEAAWQLAKRGVPVELYEMRPV 36 (436)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEEccCc
Confidence 6899999999999999999999999999998643
No 207
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=98.45 E-value=5.7e-06 Score=96.95 Aligned_cols=54 Identities=24% Similarity=0.567 Sum_probs=48.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceec---cccchhHHHhh
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVG---CIPSKALLQTS 450 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g---~~P~~~~~~~~ 450 (866)
++||||||+| +|++||..+++.|.+|+||||. +.+||+|.+.| |+|.+.+....
T Consensus 16 e~DvvvvG~G-~G~~aA~~a~~~G~~v~v~Ek~------~~~GG~~~~~gG~~~~~~~~~~~~~ 72 (564)
T PRK12845 16 TVDLLVVGSG-TGMAAALAAHELGLSVLIVEKS------SYVGGSTARSGGAFWLPASPVLDEA 72 (564)
T ss_pred eeCEEEECCc-HHHHHHHHHHHCCCcEEEEecC------CCCcCcccCcCCCEecCChHHHHHh
Confidence 5999999999 8999999999999999999997 68999999998 88887665443
No 208
>TIGR01790 carotene-cycl lycopene cyclase family protein. This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Probab=98.45 E-value=1.2e-06 Score=98.93 Aligned_cols=140 Identities=19% Similarity=0.244 Sum_probs=72.9
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhh-cCcccccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFE-YGINTQNV 470 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~-~gi~~~~~ 470 (866)
||+|||||+||+++|..|++.|++|+|||+. +..|+.+. +++.+. .+... .......+.+.. ..+.....
T Consensus 1 DviIiGaG~AGl~~A~~la~~g~~v~liE~~------~~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 71 (388)
T TIGR01790 1 DLAVIGGGPAGLAIALELARPGLRVQLIEPH------PPIPGNHT-YGVWDD-DLSDL-GLADCVEHVWPDVYEYRFPKQ 71 (388)
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEccC------CCCCCCcc-ccccHh-hhhhh-chhhHHhhcCCCceEEecCCc
Confidence 7999999999999999999999999999997 34554331 111110 00000 000000010100 00000000
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
...+... +..-....+...+...+.+.+++++.+....+.. .....+.+..+++.+++++.||.|+|..+
T Consensus 72 ~~~~~~~--~~~i~~~~l~~~l~~~~~~~gv~~~~~~v~~i~~--~~~~~~~v~~~~g~~~~a~~VI~A~G~~s 141 (388)
T TIGR01790 72 PRKLGTA--YGSVDSTRLHEELLQKCPEGGVLWLERKAIHAEA--DGVALSTVYCAGGQRIQARLVIDARGFGP 141 (388)
T ss_pred chhcCCc--eeEEcHHHHHHHHHHHHHhcCcEEEccEEEEEEe--cCCceeEEEeCCCCEEEeCEEEECCCCch
Confidence 0000000 0000011222334445566789887766555432 11244555555667899999999999876
No 209
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (PFAM:PF00070).
Probab=98.44 E-value=2.3e-06 Score=92.63 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=81.0
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc---C--------CCcc-----cHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN---F--------LNTV-----DEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~---~--------l~~~-----d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
+++|||||+.|+++|..|.+.|.+|+++++.+. + .+.+ +.++...+.+.+++.|+++++ +.++
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~ 80 (300)
T TIGR01292 2 DVIIIGAGPAGLTAAIYAARANLKTLIIEGMEPGGQLTTTTEVENYPGFPEGISGPELMEKMKEQAVKFGAEIIY-EEVI 80 (300)
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCcceeecccccccCCCCCCCChHHHHHHHHHHHHHcCCeEEE-EEEE
Confidence 589999999999999999999999999998651 1 1222 367888999999999999998 8999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+++.+++.+.+... ++. .+.+|.+++|+|..|+...
T Consensus 81 ~v~~~~~~~~v~~~--~~~------~~~~d~liiAtG~~~~~~~ 116 (300)
T TIGR01292 81 KVDLSDRPFKVKTG--DGK------EYTAKAVIIATGASARKLG 116 (300)
T ss_pred EEEecCCeeEEEeC--CCC------EEEeCEEEECCCCCcccCC
Confidence 99887766666553 454 7999999999999887654
No 210
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria. Though its precise molecular function of these proteins is not known, it is involved in the 5-carboxymethylaminomethyl modification of the wobble uridine base in some tRNAs [, ]. Sequence variations in the human mitochondrial protein may influence the severity of aminoglycoside-induced deafness []. This entry is found in GidA and related proteins, such as the methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase enzyme TrmFO.; GO: 0050660 flavin adenine dinucleotide binding, 0008033 tRNA processing; PDB: 3CES_C 3CP2_A 3G05_A 2CUL_A 3CP8_A 2ZXI_B 2ZXH_A 3G5S_A 3G5R_A 3G5Q_A.
Probab=98.44 E-value=1.8e-06 Score=94.42 Aligned_cols=129 Identities=23% Similarity=0.321 Sum_probs=69.3
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhh-------hhhhcC
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKN-------SFFEYG 464 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~-------~~~~~g 464 (866)
||+|||||+||+.||+.+++.|.+|+|+.... +.+|.. .|.|+..-.........+.. .....+
T Consensus 1 DViVVGgG~AG~eAA~aaAr~G~~V~Lit~~~-----d~i~~~----~Cnpsigg~~kg~L~~Eidalgg~m~~~aD~~~ 71 (392)
T PF01134_consen 1 DVIVVGGGHAGCEAALAAARMGAKVLLITHNT-----DTIGEM----SCNPSIGGIAKGHLVREIDALGGLMGRAADETG 71 (392)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT--EEEEES-G-----GGTT------SSSSEEESTTHHHHHHHHHHTT-SHHHHHHHHE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeecc-----cccccc----cchhhhccccccchhHHHhhhhhHHHHHHhHhh
Confidence 79999999999999999999999999994321 334432 34443221111111111110 011111
Q ss_pred c-----------ccccc--ccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcCCceE
Q psy9583 465 I-----------NTQNV--TLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINKTKET 530 (866)
Q Consensus 465 i-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~ 530 (866)
+ ..... .+|-..+.. .+...++. .+++++.+.+..+... ....+-|.+.+|..
T Consensus 72 i~~~~lN~skGpav~a~r~qvDr~~y~~-----------~~~~~l~~~~nl~i~~~~V~~l~~e--~~~v~GV~~~~g~~ 138 (392)
T PF01134_consen 72 IHFRMLNRSKGPAVHALRAQVDRDKYSR-----------AMREKLESHPNLTIIQGEVTDLIVE--NGKVKGVVTKDGEE 138 (392)
T ss_dssp EEEEEESTTS-GGCTEEEEEE-HHHHHH-----------HHHHHHHTSTTEEEEES-EEEEEEC--TTEEEEEEETTSEE
T ss_pred hhhhcccccCCCCccchHhhccHHHHHH-----------HHHHHHhcCCCeEEEEcccceEEec--CCeEEEEEeCCCCE
Confidence 1 11111 222222222 23334444 7999998877665331 23445566678899
Q ss_pred EEecEEEEecCC
Q psy9583 531 ITAKYIIIATGS 542 (866)
Q Consensus 531 i~~d~lViATGs 542 (866)
+.+|.+|+|||.
T Consensus 139 ~~a~~vVlaTGt 150 (392)
T PF01134_consen 139 IEADAVVLATGT 150 (392)
T ss_dssp EEECEEEE-TTT
T ss_pred EecCEEEEeccc
Confidence 999999999997
No 211
>PRK06834 hypothetical protein; Provisional
Probab=98.43 E-value=8.2e-07 Score=102.54 Aligned_cols=142 Identities=15% Similarity=0.262 Sum_probs=77.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchh--HHHhhHHHHHHhhh---h--hh
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKA--LLQTSHSFENVKNS---F--FE 462 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~--~~~~~~~~~~~~~~---~--~~ 462 (866)
++||+||||||+|+++|..|++.|++|+|||+.+.+. ..+. ..+++.... ++......+.+... . ..
T Consensus 3 ~~dVlIVGaGp~Gl~lA~~La~~G~~v~vlEr~~~~~----~~~~--Ra~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~ 76 (488)
T PRK06834 3 EHAVVIAGGGPTGLMLAGELALAGVDVAIVERRPNQE----LVGS--RAGGLHARTLEVLDQRGIADRFLAQGQVAQVTG 76 (488)
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC----CCCc--ceeeECHHHHHHHHHcCcHHHHHhcCCccccce
Confidence 4899999999999999999999999999999974321 0111 011122111 11111111111110 0 00
Q ss_pred cC---ccccccc--cCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEE
Q psy9583 463 YG---INTQNVT--LNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYI 536 (866)
Q Consensus 463 ~g---i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~l 536 (866)
++ +...... ..+...+. ...+...+...+++.+++++.++.+. +.. +...+.+...++.++.+|+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~i~-----q~~le~~L~~~l~~~gv~i~~~~~v~~v~~---~~~~v~v~~~~g~~i~a~~v 148 (488)
T PRK06834 77 FAATRLDISDFPTRHNYGLALW-----QNHIERILAEWVGELGVPIYRGREVTGFAQ---DDTGVDVELSDGRTLRAQYL 148 (488)
T ss_pred eeeEecccccCCCCCCcccccc-----HHHHHHHHHHHHHhCCCEEEcCCEEEEEEE---cCCeEEEEECCCCEEEeCEE
Confidence 00 0000000 00100000 11233445556677899999988776 322 22455565555678999999
Q ss_pred EEecCCCCc
Q psy9583 537 IIATGSKAR 545 (866)
Q Consensus 537 ViATGs~p~ 545 (866)
|.|.|..+.
T Consensus 149 VgADG~~S~ 157 (488)
T PRK06834 149 VGCDGGRSL 157 (488)
T ss_pred EEecCCCCC
Confidence 999998764
No 212
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=98.41 E-value=3.6e-06 Score=93.42 Aligned_cols=31 Identities=32% Similarity=0.561 Sum_probs=30.4
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
||+|||||++|+++|++|++.|++|+|+|++
T Consensus 1 DvvIIGaGi~G~~~A~~La~~G~~V~l~e~~ 31 (358)
T PF01266_consen 1 DVVIIGAGIAGLSTAYELARRGHSVTLLERG 31 (358)
T ss_dssp EEEEECTSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeec
Confidence 7999999999999999999999999999997
No 213
>PRK08274 tricarballylate dehydrogenase; Validated
Probab=98.40 E-value=9.2e-07 Score=102.17 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=33.3
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|..++||||||+|+||++||.+|++.|.+|+||||.
T Consensus 1 ~~~~~DVvVVG~G~aGl~AA~~aa~~G~~V~vlEk~ 36 (466)
T PRK08274 1 MASMVDVLVIGGGNAALCAALAAREAGASVLLLEAA 36 (466)
T ss_pred CCccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 334699999999999999999999999999999997
No 214
>PLN02463 lycopene beta cyclase
Probab=98.40 E-value=2.6e-06 Score=96.66 Aligned_cols=33 Identities=30% Similarity=0.730 Sum_probs=31.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.|||+||||||||+++|..|++.|++|+|||+.
T Consensus 28 ~~DVvIVGaGpAGLalA~~La~~Gl~V~liE~~ 60 (447)
T PLN02463 28 VVDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPS 60 (447)
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEeccC
Confidence 489999999999999999999999999999986
No 215
>PRK06481 fumarate reductase flavoprotein subunit; Validated
Probab=98.37 E-value=1.2e-06 Score=101.76 Aligned_cols=34 Identities=24% Similarity=0.620 Sum_probs=32.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.++||||||+|.||++||+.+++.|.+|+||||.
T Consensus 60 ~~~DVvVVG~G~AGl~AAi~Aa~~Ga~VivlEK~ 93 (506)
T PRK06481 60 DKYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKM 93 (506)
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4689999999999999999999999999999998
No 216
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family.; InterPro: IPR003953 In bacteria two distinct, membrane-bound, enzyme complexes are responsible for the interconversion of fumarate and succinate (1.3.99.1 from EC): fumarate reductase (Frd) is used in anaerobic growth, and succinate dehydrogenase (Sdh) is used in aerobic growth. Both complexes consist of two main components: a membrane-extrinsic component composed of a FAD-binding flavoprotein and an iron-sulphur protein; and an hydrophobic component composed of a membrane anchor protein and/or a cytochrome B. In eukaryotes mitochondrial succinate dehydrogenase (ubiquinone) (1.3.5.1 from EC) is an enzyme composed of two subunits: a FAD flavoprotein and and iron-sulphur protein. The flavoprotein subunit is a protein of about 60 to 70 Kd to which FAD is covalently bound to a histidine residue which is located in the N-terminal section of the protein []. The sequence around that histidine is well conserved in Frd and Sdh from various bacterial and eukaryotic species []. This family includes members that bind FAD such as the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase. ; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2BS4_A 2BS3_A 2BS2_A 1E7P_J 1QLB_A 1KNR_A 1KNP_A 1CHU_A 2E5V_A 3AEF_A ....
Probab=98.36 E-value=1e-06 Score=100.42 Aligned_cols=31 Identities=39% Similarity=0.588 Sum_probs=28.5
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
||||||+|.||++||++|++.|.+|+||||.
T Consensus 1 DVvVIG~G~AGl~AA~~Aae~G~~V~lvek~ 31 (417)
T PF00890_consen 1 DVVVIGGGLAGLAAAIEAAEAGAKVLLVEKG 31 (417)
T ss_dssp SEEEE-SSHHHHHHHHHHHHTTT-EEEEESS
T ss_pred CEEEECCCHHHHHHHHHHhhhcCeEEEEEee
Confidence 8999999999999999999999999999998
No 217
>PF13454 NAD_binding_9: FAD-NAD(P)-binding
Probab=98.36 E-value=1.2e-06 Score=84.95 Aligned_cols=29 Identities=28% Similarity=0.471 Sum_probs=26.3
Q ss_pred eeecCCccHHHHHHHHHHC-----CCeEEEEecc
Q psy9583 394 IVIGAGPGGYVASIRLAQL-----GFKTACIDEW 422 (866)
Q Consensus 394 vIIGgG~AGl~aA~~L~~~-----g~~V~liek~ 422 (866)
+|||+|++|++++.+|.+. ..+|+|||+.
T Consensus 1 AIIG~G~~G~~~l~~L~~~~~~~~~~~I~vfd~~ 34 (156)
T PF13454_consen 1 AIIGGGPSGLAVLERLLRQADPKPPLEITVFDPS 34 (156)
T ss_pred CEECcCHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 5999999999999999987 4689999995
No 218
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=98.33 E-value=2.7e-05 Score=88.49 Aligned_cols=60 Identities=13% Similarity=0.194 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
.+...+.+.+++.|++++.++.|++++.+++.+.+.+...++. +..++.+|.||+|+|..
T Consensus 198 ~~~~~l~~~a~~~G~~i~~~~~V~~i~~~~~~~~v~~~~~~~~---~~~~i~a~~vV~a~G~~ 257 (410)
T PRK12409 198 KFTTGLAAACARLGVQFRYGQEVTSIKTDGGGVVLTVQPSAEH---PSRTLEFDGVVVCAGVG 257 (410)
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCC---ccceEecCEEEECCCcC
Confidence 4566777888899999999999999987776666655432210 01268999999999965
No 219
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional
Probab=98.32 E-value=4.9e-06 Score=93.83 Aligned_cols=34 Identities=35% Similarity=0.572 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||+|||||+||+++|..|++.|++|+|+|+.+
T Consensus 5 ~~dv~IvGgG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (388)
T PRK07608 5 KFDVVVVGGGLVGASLALALAQSGLRVALLAPRA 38 (388)
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 4899999999999999999999999999999984
No 220
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=98.32 E-value=2e-06 Score=97.45 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=31.2
Q ss_pred cceeeecCCccHHHHHHHHHHCC--CeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~ 423 (866)
|||+||||||+|+++|..|++.| ++|+|||+.+
T Consensus 2 ~dv~IvGaG~aGl~~A~~L~~~g~g~~v~liE~~~ 36 (403)
T PRK07333 2 CDVVIAGGGYVGLALAVALKQAAPHLPVTVVDAAP 36 (403)
T ss_pred CCEEEECccHHHHHHHHHHhcCCCCCEEEEEeCCC
Confidence 89999999999999999999995 9999999973
No 221
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=98.32 E-value=7.3e-06 Score=92.52 Aligned_cols=32 Identities=25% Similarity=0.560 Sum_probs=31.2
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~ 422 (866)
+||+|||||.+|+++|++|+++ |++|+|+|+.
T Consensus 3 ~dVvIIGgGi~G~s~A~~La~~~~g~~V~llE~~ 36 (393)
T PRK11728 3 YDFVIIGGGIVGLSTAMQLQERYPGARIAVLEKE 36 (393)
T ss_pred ccEEEECCcHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 8999999999999999999999 9999999997
No 222
>PRK08244 hypothetical protein; Provisional
Probab=98.32 E-value=1.3e-06 Score=101.60 Aligned_cols=34 Identities=41% Similarity=0.725 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++.|++|+||||.+
T Consensus 2 ~~dVlIVGaGpaGl~lA~~L~~~G~~v~viEr~~ 35 (493)
T PRK08244 2 KYEVIIIGGGPVGLMLASELALAGVKTCVIERLK 35 (493)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3899999999999999999999999999999974
No 223
>PRK08163 salicylate hydroxylase; Provisional
Probab=98.31 E-value=2.2e-06 Score=96.93 Aligned_cols=36 Identities=31% Similarity=0.552 Sum_probs=33.1
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
....||+|||||++|+++|..|++.|++|+|+||.+
T Consensus 2 ~~~~~V~IvGaGiaGl~~A~~L~~~g~~v~v~Er~~ 37 (396)
T PRK08163 2 TKVTPVLIVGGGIGGLAAALALARQGIKVKLLEQAA 37 (396)
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCCCcEEEEeeCc
Confidence 335899999999999999999999999999999974
No 224
>PRK13977 myosin-cross-reactive antigen; Provisional
Probab=98.31 E-value=1.4e-05 Score=91.38 Aligned_cols=99 Identities=17% Similarity=0.202 Sum_probs=61.9
Q ss_pred cHHHHHHHHHHHhcCCcEEEEecCCcCC---CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc--CC-e-E-EEEEee
Q psy9583 579 GVIGLEIGSIWRRLGSEVTILEMSSNFL---NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN--KE-N-V-LINYSN 650 (866)
Q Consensus 579 G~~glE~A~~l~~~g~~Vtli~~~~~~l---~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~-~-~-~v~~~~ 650 (866)
-.++.|+..++.++=.++.-+.....+. ..-...+...+.+.|+++||+|+++++|+++..+ ++ + + .+.+..
T Consensus 191 whSA~E~rry~~rf~~~~~~l~~~s~l~ft~ynqyeSLV~PL~~~Le~~GV~f~~~t~VtdL~~~~d~~~~~VtgI~~~~ 270 (576)
T PRK13977 191 WHSALEMRRYMHRFIHHIGGLPDLSGLKFTKYNQYESLVLPLIKYLEDHGVDFQYGTKVTDIDFDITGGKKTATAIHLTR 270 (576)
T ss_pred hhHHHHHHHHHHHHHHhhccCCccccccCCCCCchhHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCCceEEEEEEEEe
Confidence 3689999999887733322222222221 1123677889999999999999999999999874 22 2 2 233332
Q ss_pred CCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 651 KSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 651 ~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+|. .........|.||+++|.--...-
T Consensus 271 -~~~-~~~I~l~~~DlVivTnGs~t~ns~ 297 (576)
T PRK13977 271 -NGK-EETIDLTEDDLVFVTNGSITESST 297 (576)
T ss_pred -CCc-eeEEEecCCCEEEEeCCcCccccc
Confidence 222 112335678999999996544433
No 225
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]
Probab=98.30 E-value=9.7e-07 Score=99.67 Aligned_cols=67 Identities=19% Similarity=0.466 Sum_probs=62.6
Q ss_pred CCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 11 LSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 11 ~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
+|..|. |+|++..|++||.|++||+|+.+|.|||+..|.||.+|+|.+++|+.|+.|..|+.|..++
T Consensus 1082 igApmp-G~Vv~v~V~~G~~Vk~Gd~l~~ieAMKMEt~i~Ap~dG~i~~v~V~~gd~i~~gDLLi~~~ 1148 (1149)
T COG1038 1082 IGAPMP-GVVVEVKVKKGDKVKKGDVLAVIEAMKMETTISAPFDGTVKEVLVKDGDQIDGGDLLVVVE 1148 (1149)
T ss_pred cCCCCC-CceEEEEEccCCeecCCCeeeehhhhhhceeeecCCCceEeEEEecCCCccccCceEEEcc
Confidence 445554 8999999999999999999999999999999999999999999999999999999998875
No 226
>PLN00093 geranylgeranyl diphosphate reductase; Provisional
Probab=98.29 E-value=2.5e-06 Score=97.20 Aligned_cols=33 Identities=39% Similarity=0.545 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+|||+||||||||++||..|++.|++|+|+|+.
T Consensus 39 ~~DViIVGaGPAG~~aA~~LA~~G~~VlllEr~ 71 (450)
T PLN00093 39 KLRVAVIGGGPAGACAAETLAKGGIETFLIERK 71 (450)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Confidence 599999999999999999999999999999997
No 227
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=98.27 E-value=5.7e-06 Score=93.28 Aligned_cols=36 Identities=36% Similarity=0.558 Sum_probs=33.3
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++.+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 5 ~~~~dViIVGaG~~Gl~~A~~L~~~G~~v~liE~~~ 40 (388)
T PRK07494 5 KEHTDIAVIGGGPAGLAAAIALARAGASVALVAPEP 40 (388)
T ss_pred CCCCCEEEECcCHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 346899999999999999999999999999999974
No 228
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=98.27 E-value=1.5e-06 Score=98.90 Aligned_cols=36 Identities=25% Similarity=0.447 Sum_probs=33.4
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
...+||+|||||+||+++|..|++.|++|+|||+.+
T Consensus 16 ~~~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 51 (415)
T PRK07364 16 SLTYDVAIVGGGIVGLTLAAALKDSGLRIALIEAQP 51 (415)
T ss_pred ccccCEEEECcCHHHHHHHHHHhcCCCEEEEEecCC
Confidence 345999999999999999999999999999999984
No 229
>TIGR02023 BchP-ChlP geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).
Probab=98.26 E-value=2.8e-06 Score=95.69 Aligned_cols=32 Identities=41% Similarity=0.672 Sum_probs=31.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|||+||||||||++||+.|++.|++|+|+|+.
T Consensus 1 yDVvIVGaGpAG~~aA~~La~~G~~V~l~E~~ 32 (388)
T TIGR02023 1 YDVAVIGGGPSGATAAETLARAGIETILLERA 32 (388)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 79999999999999999999999999999996
No 230
>PRK07121 hypothetical protein; Validated
Probab=98.25 E-value=1e-05 Score=93.96 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=32.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||||||+|.||++||.++++.|.+|+|+||.
T Consensus 20 ~~DVvVVGaG~AGl~AA~~aae~G~~VillEK~ 52 (492)
T PRK07121 20 EADVVVVGFGAAGACAAIEAAAAGARVLVLERA 52 (492)
T ss_pred ccCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 589999999999999999999999999999997
No 231
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=98.25 E-value=5.1e-05 Score=85.29 Aligned_cols=55 Identities=18% Similarity=0.217 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
..+...+.+.+++.|++++.++.|.+++.+++.+.+... ++ ++.+|.||+|+|..
T Consensus 145 ~~~~~~l~~~~~~~g~~~~~~~~V~~i~~~~~~~~v~~~--~~-------~i~a~~vV~aaG~~ 199 (380)
T TIGR01377 145 EKALRALQELAEAHGATVRDGTKVVEIEPTELLVTVKTT--KG-------SYQANKLVVTAGAW 199 (380)
T ss_pred HHHHHHHHHHHHHcCCEEECCCeEEEEEecCCeEEEEeC--CC-------EEEeCEEEEecCcc
Confidence 455677777888899999999999999887766655442 33 68899999999964
No 232
>TIGR00275 flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae.
Probab=98.25 E-value=3.6e-06 Score=94.84 Aligned_cols=138 Identities=16% Similarity=0.221 Sum_probs=74.2
Q ss_pred eeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceec---cccc-----hhH-HHh---hHH---------
Q psy9583 394 IVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVG---CIPS-----KAL-LQT---SHS--------- 452 (866)
Q Consensus 394 vIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g---~~P~-----~~~-~~~---~~~--------- 452 (866)
+|||||+||++||..|++.|++|+|+|+. +.+|+.+...| |... ..+ ... ...
T Consensus 1 vIIGgG~aGl~aAi~aa~~G~~V~llEk~------~~~G~k~~~sG~grcn~tn~~~~~~~~~~~~~~~~~~~~~l~~~~ 74 (400)
T TIGR00275 1 IIIGGGAAGLMAAITAAREGLSVLLLEKN------KKIGKKLLISGGGRCNLTNSCPTPEFVAYYPRNGKFLRSALSRFS 74 (400)
T ss_pred CEEEEeHHHHHHHHHHHhcCCcEEEEecC------ccccccccccCCceEEccCCCcchhHHHhcCCCcHHHHHHHHhCC
Confidence 69999999999999999999999999998 34444322211 1110 000 000 000
Q ss_pred HHHHhhhhhhcCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEE
Q psy9583 453 FENVKNSFFEYGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETI 531 (866)
Q Consensus 453 ~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i 531 (866)
......++...|+...... ...++.. ......+...+...+++.+++++.+..+. +.. ....+.+..+ +..+
T Consensus 75 ~~d~~~~~~~~Gv~~~~~~--~g~~~p~-~~~a~~v~~~L~~~l~~~gv~i~~~~~V~~i~~---~~~~~~v~~~-~~~i 147 (400)
T TIGR00275 75 NKDLIDFFESLGLELKVEE--DGRVFPC-SDSAADVLDALLNELKELGVEILTNSKVKSIKK---DDNGFGVETS-GGEY 147 (400)
T ss_pred HHHHHHHHHHcCCeeEEec--CCEeECC-CCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEe---cCCeEEEEEC-CcEE
Confidence 1111222334444321100 0000000 00011223345556777899999887665 322 2234555543 4579
Q ss_pred EecEEEEecCCCC
Q psy9583 532 TAKYIIIATGSKA 544 (866)
Q Consensus 532 ~~d~lViATGs~p 544 (866)
.+|+||+|||...
T Consensus 148 ~ad~VIlAtG~~s 160 (400)
T TIGR00275 148 EADKVILATGGLS 160 (400)
T ss_pred EcCEEEECCCCcc
Confidence 9999999999754
No 233
>PRK07190 hypothetical protein; Provisional
Probab=98.24 E-value=5.3e-06 Score=95.76 Aligned_cols=34 Identities=32% Similarity=0.492 Sum_probs=32.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 5 ~~dVlIVGAGPaGL~lA~~Lar~Gi~V~llEr~~ 38 (487)
T PRK07190 5 VTDVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSD 38 (487)
T ss_pred cceEEEECCCHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4899999999999999999999999999999984
No 234
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=98.24 E-value=7.7e-06 Score=92.46 Aligned_cols=33 Identities=33% Similarity=0.690 Sum_probs=31.6
Q ss_pred ccceeeecCCccHHHHHHHHHHC---CCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL---GFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~ 422 (866)
++||+||||||||+++|..|++. |++|+|||+.
T Consensus 3 ~~dv~IvGaG~aGl~~A~~L~~~~~~G~~v~v~E~~ 38 (395)
T PRK05732 3 RMDVIIVGGGMAGATLALALSRLSHGGLPVALIEAF 38 (395)
T ss_pred cCCEEEECcCHHHHHHHHHhhhcccCCCEEEEEeCC
Confidence 59999999999999999999998 9999999995
No 235
>KOG2820|consensus
Probab=98.24 E-value=9.5e-06 Score=84.21 Aligned_cols=158 Identities=17% Similarity=0.191 Sum_probs=89.4
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcccee-ccccchhH-HHhhHHHHHHhhhhhhcC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNV-GCIPSKAL-LQTSHSFENVKNSFFEYG 464 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~-g~~P~~~~-~~~~~~~~~~~~~~~~~g 464 (866)
|.+..|++|||+|.-|+++|++|+++|.+++++|+.+.|.++....|..... ...+...+ ....+.++.....-...|
T Consensus 4 ~~~~~~viiVGAGVfG~stAyeLaK~g~killLeqf~~ph~~GSShg~sRIiR~~Y~e~~Y~~m~~ea~e~W~~~~~~~g 83 (399)
T KOG2820|consen 4 MVKSRDVIIVGAGVFGLSTAYELAKRGDKILLLEQFPLPHSRGSSHGISRIIRPAYAEDKYMSMVLEAYEKWRNLPEESG 83 (399)
T ss_pred cccceeEEEEcccccchHHHHHHHhcCCeEEEEeccCCCcccCcccCcceeechhhhhHHHHHHHHHHHHHHHhChhhhc
Confidence 5567999999999999999999999999999999987766665555543211 11110000 001111111111000001
Q ss_pred ccc---------cccc-cCHHHHHHH------------HHHHHHh--------------------------hhhhHHHHH
Q psy9583 465 INT---------QNVT-LNLQKMLER------------KNNIIKK--------------------------NNSGILFLF 496 (866)
Q Consensus 465 i~~---------~~~~-~~~~~~~~~------------~~~~~~~--------------------------~~~~~~~~~ 496 (866)
... .... ..+.++... ..++.++ -...++..+
T Consensus 84 ~~~~~~t~~~~~~~~e~~~~~sv~~~~k~~~l~h~~l~seEvrk~fP~~~~l~d~~~G~~n~~gGvi~a~kslk~~~~~~ 163 (399)
T KOG2820|consen 84 VKLHCGTGLLISGDPERQRLDSVAANLKRKGLAHSVLISEEVRKRFPSNIPLPDGWQGVVNESGGVINAAKSLKALQDKA 163 (399)
T ss_pred eeecccceeeecCcHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHhCCCCccCCcchhhcccccccEeeHHHHHHHHHHHH
Confidence 000 0000 001000000 0011111 112355677
Q ss_pred HhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 497 KKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 497 ~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
++.|+.++.|+.+. ...++.....+.|.+.+|..+.++++|+++|++-
T Consensus 164 ~~~G~i~~dg~~v~~~~~~~e~~~~v~V~Tt~gs~Y~akkiI~t~GaWi 212 (399)
T KOG2820|consen 164 RELGVIFRDGEKVKFIKFVDEEGNHVSVQTTDGSIYHAKKIIFTVGAWI 212 (399)
T ss_pred HHcCeEEecCcceeeEeeccCCCceeEEEeccCCeeecceEEEEecHHH
Confidence 88899999988877 3334456677788887888899999999999863
No 236
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=98.23 E-value=1.9e-06 Score=97.33 Aligned_cols=35 Identities=29% Similarity=0.487 Sum_probs=32.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+.|||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 4 ~~~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~ 38 (391)
T PRK08020 4 QPTDIAIVGGGMVGAALALGLAQHGFSVAVLEHAA 38 (391)
T ss_pred ccccEEEECcCHHHHHHHHHHhcCCCEEEEEcCCC
Confidence 35999999999999999999999999999999973
No 237
>PRK06184 hypothetical protein; Provisional
Probab=98.22 E-value=2.6e-06 Score=99.29 Aligned_cols=35 Identities=34% Similarity=0.600 Sum_probs=32.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
++||+||||||+|+++|..|++.|++|+||||.+.
T Consensus 3 ~~dVlIVGaGpaGl~~A~~La~~Gi~v~viE~~~~ 37 (502)
T PRK06184 3 TTDVLIVGAGPTGLTLAIELARRGVSFRLIEKAPE 37 (502)
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 58999999999999999999999999999999743
No 238
>PRK08013 oxidoreductase; Provisional
Probab=98.21 E-value=1e-05 Score=91.54 Aligned_cols=35 Identities=23% Similarity=0.438 Sum_probs=32.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
++||+||||||+|+++|..|++.|++|+|||+.+.
T Consensus 3 ~~dV~IvGaGpaGl~~A~~La~~G~~v~viE~~~~ 37 (400)
T PRK08013 3 SVDVVIAGGGMVGLAVACGLQGSGLRVAVLEQRVP 37 (400)
T ss_pred cCCEEEECcCHHHHHHHHHHhhCCCEEEEEeCCCC
Confidence 48999999999999999999999999999999843
No 239
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=98.20 E-value=9.4e-06 Score=92.07 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=32.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 2 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~viE~~~ 35 (405)
T PRK05714 2 RADLLIVGAGMVGSALALALQGSGLEVLLLDGGP 35 (405)
T ss_pred CccEEEECccHHHHHHHHHHhcCCCEEEEEcCCC
Confidence 4899999999999999999999999999999973
No 240
>PRK09126 hypothetical protein; Provisional
Probab=98.20 E-value=7e-06 Score=92.73 Aligned_cols=34 Identities=35% Similarity=0.582 Sum_probs=32.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++.|++|+|+||.+
T Consensus 3 ~~dviIvGgG~aGl~~A~~L~~~G~~v~v~E~~~ 36 (392)
T PRK09126 3 HSDIVVVGAGPAGLSFARSLAGSGLKVTLIERQP 36 (392)
T ss_pred cccEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4999999999999999999999999999999974
No 241
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=98.20 E-value=2e-05 Score=92.68 Aligned_cols=44 Identities=30% Similarity=0.619 Sum_probs=39.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceec
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVG 439 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g 439 (866)
++||+|||+|.+|++||..+++.|.+|+|||+. ..+||+|.+.+
T Consensus 6 ~~DvvIiG~G~aGl~aA~~~a~~G~~v~liEk~------~~~gG~~~~s~ 49 (557)
T PRK12844 6 TYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQ------DKVGGSTAMSG 49 (557)
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecC------CCCCceeceec
Confidence 589999999999999999999999999999997 56788876654
No 242
>PRK12834 putative FAD-binding dehydrogenase; Reviewed
Probab=98.19 E-value=8.2e-06 Score=95.94 Aligned_cols=36 Identities=42% Similarity=0.577 Sum_probs=33.5
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|..++||||||+|.||++||..+++.|.+|+||||.
T Consensus 1 ~~~~~DVvVVG~G~AGl~AAl~Aa~~G~~VivlEK~ 36 (549)
T PRK12834 1 MAMDADVIVVGAGLAGLVAAAELADAGKRVLLLDQE 36 (549)
T ss_pred CCccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 344699999999999999999999999999999998
No 243
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=98.19 E-value=1.3e-05 Score=90.32 Aligned_cols=99 Identities=17% Similarity=0.286 Sum_probs=69.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..++++|.+|+|||+.+ .+ .| ..
T Consensus 174 ~~lvIiGgG~IGlE~a~~~~~LG~~VTiie~~~------~i---------Lp--------------------------~~ 212 (454)
T COG1249 174 KSLVIVGGGYIGLEFASVFAALGSKVTVVERGD------RI---------LP--------------------------GE 212 (454)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEecCC------CC---------CC--------------------------cC
Confidence 679999999999999999999999999999972 21 01 00
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCce--EEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~--~i~~d~lViATGs~p~~ 546 (866)
+.+.. ..+...+++.++.++.+..+.... .....+.+..+++. .+.+|++++|+|-+|+.
T Consensus 213 D~ei~--------------~~~~~~l~~~gv~i~~~~~v~~~~--~~~~~v~v~~~~g~~~~~~ad~vLvAiGR~Pn~ 274 (454)
T COG1249 213 DPEIS--------------KELTKQLEKGGVKILLNTKVTAVE--KKDDGVLVTLEDGEGGTIEADAVLVAIGRKPNT 274 (454)
T ss_pred CHHHH--------------HHHHHHHHhCCeEEEccceEEEEE--ecCCeEEEEEecCCCCEEEeeEEEEccCCccCC
Confidence 11111 123445666789999988877422 12222555544443 78999999999999884
No 244
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=98.18 E-value=1.1e-05 Score=91.39 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 4 ~~dV~IvGaG~~Gl~~A~~L~~~G~~v~viE~~ 36 (405)
T PRK08850 4 SVDVAIIGGGMVGLALAAALKESDLRIAVIEGQ 36 (405)
T ss_pred cCCEEEECccHHHHHHHHHHHhCCCEEEEEcCC
Confidence 589999999999999999999999999999985
No 245
>PLN02697 lycopene epsilon cyclase
Probab=98.17 E-value=6e-06 Score=95.18 Aligned_cols=33 Identities=33% Similarity=0.608 Sum_probs=31.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+||||||||+++|..|++.|++|+|||+.
T Consensus 108 ~~DVvIVGaGPAGLalA~~Lak~Gl~V~LIe~~ 140 (529)
T PLN02697 108 TLDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 140 (529)
T ss_pred cccEEEECcCHHHHHHHHHHHhCCCcEEEecCc
Confidence 589999999999999999999999999999985
No 246
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=98.17 E-value=1.1e-05 Score=90.64 Aligned_cols=33 Identities=27% Similarity=0.481 Sum_probs=31.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+||||||+|+++|..|++.|++|+|||+.
T Consensus 3 ~~dv~IvGgG~aGl~~A~~L~~~G~~v~l~E~~ 35 (384)
T PRK08849 3 KYDIAVVGGGMVGAATALGFAKQGRSVAVIEGG 35 (384)
T ss_pred cccEEEECcCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 489999999999999999999999999999986
No 247
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=98.17 E-value=2.7e-06 Score=94.43 Aligned_cols=34 Identities=38% Similarity=0.771 Sum_probs=30.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
+||+|||||+||+++|..|++.|++|+|||+.+.
T Consensus 2 ~dV~IvGaG~aGl~~A~~L~~~G~~v~i~E~~~~ 35 (356)
T PF01494_consen 2 YDVAIVGAGPAGLAAALALARAGIDVTIIERRPD 35 (356)
T ss_dssp EEEEEE--SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred ceEEEECCCHHHHHHHHHHHhcccccccchhccc
Confidence 7999999999999999999999999999999743
No 248
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare [].; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0016117 carotenoid biosynthetic process
Probab=98.17 E-value=3.8e-06 Score=93.86 Aligned_cols=32 Identities=44% Similarity=0.683 Sum_probs=29.9
Q ss_pred ceeeecCCccHHHHHHHH--HHCCCeEEEEeccC
Q psy9583 392 DVIVIGAGPGGYVASIRL--AQLGFKTACIDEWK 423 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L--~~~g~~V~liek~~ 423 (866)
||+|||||+||+++|.+| ++.|.+|+|||+.+
T Consensus 1 DviIvGaGpAGlslA~~l~~~~~g~~Vllid~~~ 34 (374)
T PF05834_consen 1 DVIIVGAGPAGLSLARRLADARPGLSVLLIDPKP 34 (374)
T ss_pred CEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 899999999999999999 77799999999873
No 249
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=98.16 E-value=7.2e-06 Score=92.31 Aligned_cols=33 Identities=30% Similarity=0.547 Sum_probs=31.2
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
||+|||||+||+++|..|++.|++|+|+||.+.
T Consensus 1 dViIvGaG~aGl~~A~~L~~~G~~v~v~Er~~~ 33 (385)
T TIGR01988 1 DIVIVGGGMVGLALALALARSGLKIALIEATPA 33 (385)
T ss_pred CEEEECCCHHHHHHHHHHhcCCCEEEEEeCCCc
Confidence 799999999999999999999999999999853
No 250
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=98.16 E-value=2.6e-06 Score=69.42 Aligned_cols=38 Identities=32% Similarity=0.566 Sum_probs=33.6
Q ss_pred eecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcccee
Q psy9583 395 VIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNV 438 (866)
Q Consensus 395 IIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~ 438 (866)
|||||++|+++|..|++.|++|+|+|+. +.+||.+...
T Consensus 1 IiGaG~sGl~aA~~L~~~g~~v~v~E~~------~~~GG~~~~~ 38 (68)
T PF13450_consen 1 IIGAGISGLAAAYYLAKAGYRVTVFEKN------DRLGGRARSF 38 (68)
T ss_dssp EES-SHHHHHHHHHHHHTTSEEEEEESS------SSSSGGGCEE
T ss_pred CEeeCHHHHHHHHHHHHCCCcEEEEecC------cccCcceeEE
Confidence 8999999999999999999999999998 7889877543
No 251
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=98.15 E-value=7.3e-06 Score=92.23 Aligned_cols=33 Identities=36% Similarity=0.589 Sum_probs=31.2
Q ss_pred ceeeecCCccHHHHHHHHHHCC-CeEEEEeccCC
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLG-FKTACIDEWKD 424 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~~ 424 (866)
||+||||||+|+++|..|++.| ++|+|+|+.+.
T Consensus 1 dv~IvGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 34 (382)
T TIGR01984 1 DVIIVGGGLVGLSLALALSRLGKIKIALIEANSP 34 (382)
T ss_pred CEEEECccHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 7999999999999999999999 99999999743
No 252
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=98.15 E-value=2.4e-05 Score=83.91 Aligned_cols=98 Identities=19% Similarity=0.281 Sum_probs=79.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------------------------------------cc----
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-------------------------------------TV---- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-------------------------------------~~---- 609 (866)
..|+|||||+.|+-+|..+++.|.+|.++++++.+.+ .|
T Consensus 4 ~dviIIGgGpAGlMaA~~aa~~G~~V~lid~~~k~GrKil~sGgGrCN~Tn~~~~~~~ls~~p~~~~fl~sal~~ft~~d 83 (408)
T COG2081 4 FDVIIIGGGPAGLMAAISAAKAGRRVLLIDKGPKLGRKILMSGGGRCNFTNSEAPDEFLSRNPGNGHFLKSALARFTPED 83 (408)
T ss_pred ceEEEECCCHHHHHHHHHHhhcCCEEEEEecCccccceeEecCCCCccccccccHHHHHHhCCCcchHHHHHHHhCCHHH
Confidence 4689999999999999999999999999987654311 00
Q ss_pred --------------------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 610 --------------------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 610 --------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
...+.+.+.+.+++.||+++++++|.+++.++....+... +|. ++.
T Consensus 84 ~i~~~e~~Gi~~~e~~~Gr~Fp~sdkA~~Iv~~ll~~~~~~gV~i~~~~~v~~v~~~~~~f~l~t~--~g~------~i~ 155 (408)
T COG2081 84 FIDWVEGLGIALKEEDLGRMFPDSDKASPIVDALLKELEALGVTIRTRSRVSSVEKDDSGFRLDTS--SGE------TVK 155 (408)
T ss_pred HHHHHHhcCCeeEEccCceecCCccchHHHHHHHHHHHHHcCcEEEecceEEeEEecCceEEEEcC--CCC------EEE
Confidence 1345777788999999999999999999988766666554 665 899
Q ss_pred ccEEEEeeccccC
Q psy9583 664 FDKLLIAIGRIPN 676 (866)
Q Consensus 664 ~D~vi~a~G~~p~ 676 (866)
||.+|+|+|-...
T Consensus 156 ~d~lilAtGG~S~ 168 (408)
T COG2081 156 CDSLILATGGKSW 168 (408)
T ss_pred ccEEEEecCCcCC
Confidence 9999999995433
No 253
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=98.15 E-value=5.2e-05 Score=86.68 Aligned_cols=137 Identities=19% Similarity=0.273 Sum_probs=94.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-----------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT----------------------------------------- 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 608 (866)
.++|+|||+|+.|+-+|..|.+.|.+|+++++++.+...
T Consensus 10 ~~~VaIIGAG~aGL~aA~~l~~~G~~v~vfE~~~~vGG~W~~~~~~~~d~~~~~~~~~~~~s~~Y~~L~tn~p~~~m~f~ 89 (461)
T PLN02172 10 SQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDPLSLDPTRSIVHSSVYESLRTNLPRECMGYR 89 (461)
T ss_pred CCCEEEECCcHHHHHHHHHHHhcCCeEEEEecCCCCcceeecCCCcCCCccccCCCCcccchhhhhhhhccCCHhhccCC
Confidence 589999999999999999999999999999886533110
Q ss_pred -------------------ccHHHHHHHHHHHHHcCCE--EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEE
Q psy9583 609 -------------------VDEEIAKKAFHLLNKQGLN--IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKL 667 (866)
Q Consensus 609 -------------------~d~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~v 667 (866)
-..++.+++++..+..|+. +.++++|++++..++.+.++....++. ..+..+|.|
T Consensus 90 dfp~~~~~~~~~~~~~~fp~~~ev~~YL~~~a~~fgl~~~I~~~t~V~~V~~~~~~w~V~~~~~~~~----~~~~~~d~V 165 (461)
T PLN02172 90 DFPFVPRFDDESRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQSKNSGGF----SKDEIFDAV 165 (461)
T ss_pred CCCCCcccccccCcCCCCCCHHHHHHHHHHHHHHcCCcceEEecCEEEEEeecCCeEEEEEEcCCCc----eEEEEcCEE
Confidence 0145677777888888988 889999999998777788877633222 235689999
Q ss_pred EEeec--cccCCCCCCccccCeeecCCCcEEeCCCCCC----CCCCEEEecccC
Q psy9583 668 LIAIG--RIPNTNNLNIDKIGLKVNENNFIIVNDNCET----NIPNIYAIGDVV 715 (866)
Q Consensus 668 i~a~G--~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~T----s~~~VyA~GD~a 715 (866)
|+|+| ..|+...+ . |++.- .|.+.--..++. ..++|-.+|-..
T Consensus 166 IvAtG~~~~P~~P~i--p--G~~~f-~G~~iHs~~yr~~~~~~gk~VvVVG~G~ 214 (461)
T PLN02172 166 VVCNGHYTEPNVAHI--P--GIKSW-PGKQIHSHNYRVPDPFKNEVVVVIGNFA 214 (461)
T ss_pred EEeccCCCCCcCCCC--C--CcccC-CceEEEecccCCccccCCCEEEEECCCc
Confidence 99999 46665432 1 22111 232222122222 357788888544
No 254
>KOG0369|consensus
Probab=98.14 E-value=4.1e-06 Score=92.63 Aligned_cols=67 Identities=19% Similarity=0.416 Sum_probs=62.7
Q ss_pred CCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 11 LSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 11 ~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
+|..|. |+|+++.|++|+.|++||+|+.+..||+++-|.||.+|+++++++..|+.+..|+.++.+|
T Consensus 1109 igAPMp-G~vieikvk~G~kV~Kgqpl~VLSAMKMEmVv~sP~~G~vk~v~v~~g~~~~g~DL~~~~E 1175 (1176)
T KOG0369|consen 1109 IGAPMP-GTVIEIKVKEGAKVKKGQPLAVLSAMKMEMVISSPHAGTVKKVHVVQGTKVEGGDLIVELE 1175 (1176)
T ss_pred ccCCCC-CceEEEEEecCceecCCCceEeeecceeeeeecCCCCceeeEEEecCCCcccccceEEEcc
Confidence 444444 9999999999999999999999999999999999999999999999999999999999886
No 255
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=98.14 E-value=4.4e-05 Score=87.48 Aligned_cols=180 Identities=15% Similarity=0.146 Sum_probs=101.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+|+|||||++|+.+|..+++.|.+|+++++.+ .+. |. .
T Consensus 158 ~~vvIIGgG~~g~e~A~~l~~~g~~Vtli~~~~------~~l---------~~--------------------------~ 196 (438)
T PRK07251 158 ERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAAS------TIL---------PR--------------------------E 196 (438)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEecCC------ccC---------CC--------------------------C
Confidence 579999999999999999999999999999862 210 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
..++. ..+...+++.||+++.+..+. ++. ....+.+.. ++.++.+|.||+|+|..|... .
T Consensus 197 ~~~~~--------------~~~~~~l~~~GI~i~~~~~V~~i~~---~~~~v~v~~-~g~~i~~D~viva~G~~p~~~-~ 257 (438)
T PRK07251 197 EPSVA--------------ALAKQYMEEDGITFLLNAHTTEVKN---DGDQVLVVT-EDETYRFDALLYATGRKPNTE-P 257 (438)
T ss_pred CHHHH--------------HHHHHHHHHcCCEEEcCCEEEEEEe---cCCEEEEEE-CCeEEEcCEEEEeeCCCCCcc-c
Confidence 00000 112345677899999887655 322 223455543 356899999999999998742 1
Q ss_pred CcCC-------CceEecchhhhccccCCCeEEEECC---c----HHHHHHHHHHHh--cCC-cEEEEecCCcCCC-cccH
Q psy9583 550 VKFD-------ENLILSNKGALEMINVPKKLCIIGA---G----VIGLEIGSIWRR--LGS-EVTILEMSSNFLN-TVDE 611 (866)
Q Consensus 550 ~~~~-------~~~~~t~~~~~~~~~~~~~vvVIGg---G----~~glE~A~~l~~--~g~-~Vtli~~~~~~l~-~~d~ 611 (866)
.+.. .......++. +....+.|-.+|. + +++++-+..... .|. .+.+..+...... .+++
T Consensus 258 l~l~~~~~~~~~~g~i~vd~~--~~t~~~~IyaiGD~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p 335 (438)
T PRK07251 258 LGLENTDIELTERGAIKVDDY--CQTSVPGVFAVGDVNGGPQFTYISLDDFRIVFGYLTGDGSYTLEDRGNVPTTMFITP 335 (438)
T ss_pred CCchhcCcEECCCCcEEECCC--cccCCCCEEEeeecCCCcccHhHHHHHHHHHHHHHcCCCCccccccCCCCEEEECCC
Confidence 1111 1111111111 1122466777875 4 555552222211 122 2222222111111 3466
Q ss_pred HHHHH--HHHHHHHcCCEEEeCc
Q psy9583 612 EIAKK--AFHLLNKQGLNIILNT 632 (866)
Q Consensus 612 ~~~~~--l~~~l~~~GV~i~~~~ 632 (866)
++... .++.+++.|+++....
T Consensus 336 ~ia~vGlte~~a~~~g~~~~~~~ 358 (438)
T PRK07251 336 PLSQVGLTEKEAKEAGLPYAVKE 358 (438)
T ss_pred ceEeeeCCHHHHHhcCCCeEEEE
Confidence 66555 6777888888766543
No 256
>PRK11445 putative oxidoreductase; Provisional
Probab=98.14 E-value=1e-05 Score=89.67 Aligned_cols=32 Identities=38% Similarity=0.568 Sum_probs=30.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|||+||||||||+++|..|++. ++|+|+|+.+
T Consensus 2 ~dV~IvGaGpaGl~~A~~La~~-~~V~liE~~~ 33 (351)
T PRK11445 2 YDVAIIGLGPAGSALARLLAGK-MKVIAIDKKH 33 (351)
T ss_pred ceEEEECCCHHHHHHHHHHhcc-CCEEEEECCC
Confidence 8999999999999999999999 9999999974
No 257
>TIGR01813 flavo_cyto_c flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton.
Probab=98.13 E-value=2.1e-05 Score=90.18 Aligned_cols=31 Identities=26% Similarity=0.522 Sum_probs=30.3
Q ss_pred ceeeecCCccHHHHHHHHHHCC-CeEEEEecc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLG-FKTACIDEW 422 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~ 422 (866)
||||||+|.||++||.++++.| .+|+|+||.
T Consensus 1 DVvVVG~G~AGl~AA~~aa~~G~~~V~vlEk~ 32 (439)
T TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGAANVVLLEKM 32 (439)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCccEEEEecC
Confidence 7999999999999999999999 999999998
No 258
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=98.13 E-value=6.5e-06 Score=92.91 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 2 ~~dV~IvGaGpaGl~~A~~L~~~G~~v~v~E~~~ 35 (392)
T PRK08243 2 RTQVAIIGAGPAGLLLGQLLHLAGIDSVVLERRS 35 (392)
T ss_pred cceEEEECCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 3899999999999999999999999999999984
No 259
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Probab=98.13 E-value=3.9e-05 Score=88.61 Aligned_cols=181 Identities=19% Similarity=0.210 Sum_probs=103.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||++|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~------~~l---------~~---------------------~----- 209 (461)
T TIGR01350 171 ESLVIIGGGVIGIEFASIFASLGSKVTVIEMLD------RIL---------PG---------------------E----- 209 (461)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC------CCC---------CC---------------------C-----
Confidence 679999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARSF 547 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~~ 547 (866)
..++ ...+...+++.||+++.++.+. ++. ..+.+.+...++ .++.+|.||+|+|..|...
T Consensus 210 ~~~~--------------~~~~~~~l~~~gi~i~~~~~v~~i~~---~~~~v~v~~~~g~~~~i~~D~vi~a~G~~p~~~ 272 (461)
T TIGR01350 210 DAEV--------------SKVVAKALKKKGVKILTNTKVTAVEK---NDDQVVYENKGGETETLTGEKVLVAVGRKPNTE 272 (461)
T ss_pred CHHH--------------HHHHHHHHHHcCCEEEeCCEEEEEEE---eCCEEEEEEeCCcEEEEEeCEEEEecCCcccCC
Confidence 0000 0112345677899999987665 322 224455554444 5799999999999998743
Q ss_pred C-CCc-----CCCceEecchhhhccccCCCeEEEECCcH-----------HHHHHHHHHHhcCCcEEEEecCCcCCC-cc
Q psy9583 548 P-GVK-----FDENLILSNKGALEMINVPKKLCIIGAGV-----------IGLEIGSIWRRLGSEVTILEMSSNFLN-TV 609 (866)
Q Consensus 548 p-~~~-----~~~~~~~t~~~~~~~~~~~~~vvVIGgG~-----------~glE~A~~l~~~g~~Vtli~~~~~~l~-~~ 609 (866)
. ... .+....+..++. +....+.|-++|... .|..+|..+...+.. .+........ .+
T Consensus 273 ~l~~~~~gl~~~~~g~i~vd~~--l~t~~~~IyaiGD~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~~~~~~~ 348 (461)
T TIGR01350 273 GLGLENLGVELDERGRIVVDEY--MRTNVPGIYAIGDVIGGPMLAHVASHEGIVAAENIAGKEPA--PIDYDAVPSCIYT 348 (461)
T ss_pred CCCcHhhCceECCCCcEeeCCC--cccCCCCEEEeeecCCCcccHHHHHHHHHHHHHHHcCCCCC--CCCCCCCCeEEec
Confidence 1 111 111111111111 112246788888642 344555555543321 1111111111 23
Q ss_pred cHHHHHH--HHHHHHHcCCEEEeCce
Q psy9583 610 DEEIAKK--AFHLLNKQGLNIILNTK 633 (866)
Q Consensus 610 d~~~~~~--l~~~l~~~GV~i~~~~~ 633 (866)
++++... .++.+++.|+++.....
T Consensus 349 ~~~~a~vG~~~~~a~~~g~~~~~~~~ 374 (461)
T TIGR01350 349 DPEVASVGLTEEQAKEAGYDVKIGKF 374 (461)
T ss_pred CCceEEEeCCHHHHHhCCCCeEEEEE
Confidence 5555544 67778888888665443
No 260
>cd06848 GCS_H Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.
Probab=98.12 E-value=5e-06 Score=72.98 Aligned_cols=51 Identities=14% Similarity=0.071 Sum_probs=45.2
Q ss_pred eEEEEE-EEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCE
Q psy9583 17 EATLLN-WHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSI 67 (866)
Q Consensus 17 ~g~i~~-w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~ 67 (866)
-|+|.. |++++|+.|++||++++||++|+..+|.||.+|+|.++..+..+.
T Consensus 28 lG~i~~i~~~~~G~~v~~g~~l~~iEs~k~~~~i~sP~~G~v~~~n~~l~~~ 79 (96)
T cd06848 28 LGDIVFVELPEVGTEVKKGDPFGSVESVKAASDLYSPVSGEVVEVNEALLDN 79 (96)
T ss_pred CCCEEEEEecCCCCEEeCCCEEEEEEEccEEEEEeCCCCEEEEEEhhhhhcC
Confidence 467777 677779999999999999999999999999999999998776654
No 261
>COG0579 Predicted dehydrogenase [General function prediction only]
Probab=98.11 E-value=4.5e-05 Score=84.51 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.++...+.+.+.++|+++++++.|+.++..++++.+... .+|+ . +++|+.||.|.|....
T Consensus 153 ~~~t~~l~e~a~~~g~~i~ln~eV~~i~~~~dg~~~~~~-~~g~----~-~~~ak~Vin~AGl~Ad 212 (429)
T COG0579 153 GELTRALAEEAQANGVELRLNTEVTGIEKQSDGVFVLNT-SNGE----E-TLEAKFVINAAGLYAD 212 (429)
T ss_pred HHHHHHHHHHHHHcCCEEEecCeeeEEEEeCCceEEEEe-cCCc----E-EEEeeEEEECCchhHH
Confidence 345677778888889999999999999998875333322 2554 1 2999999999997543
No 262
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.
Probab=98.09 E-value=3.9e-05 Score=88.44 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=31.3
Q ss_pred ccceeeecCCccHHHHHHHHHHC--CCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~ 422 (866)
++||+|||||.+|+++|++|++. |.+|+|+|++
T Consensus 24 ~~DVvIIGgGi~Gls~A~~La~~~~G~~V~vlE~~ 58 (460)
T TIGR03329 24 QADVCIVGGGFTGLWTAIMIKQQRPALDVLVLEAD 58 (460)
T ss_pred eeCEEEECCCHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 48999999999999999999998 8999999996
No 263
>PRK12839 hypothetical protein; Provisional
Probab=98.09 E-value=2.1e-05 Score=92.48 Aligned_cols=46 Identities=30% Similarity=0.538 Sum_probs=40.6
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceec
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVG 439 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g 439 (866)
..++||+|||+|.+|++||..+++.|.+|+|||+. ..+||.|...+
T Consensus 6 ~~~~dv~ViG~G~aG~~aa~~~~~~g~~v~~iek~------~~~gg~~~~~~ 51 (572)
T PRK12839 6 THTYDVVVVGSGAGGLSAAVAAAYGGAKVLVVEKA------STCGGATAWSG 51 (572)
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecC------CCCCccccccC
Confidence 34699999999999999999999999999999997 56788876655
No 264
>PRK07045 putative monooxygenase; Reviewed
Probab=98.08 E-value=7.7e-06 Score=92.21 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=33.5
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
+.+||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 4 ~~~~V~IiGgGpaGl~~A~~L~~~G~~v~v~E~~~~ 39 (388)
T PRK07045 4 NPVDVLINGSGIAGVALAHLLGARGHSVTVVERAAR 39 (388)
T ss_pred ceeEEEEECCcHHHHHHHHHHHhcCCcEEEEeCCCc
Confidence 468999999999999999999999999999999843
No 265
>PRK06185 hypothetical protein; Provisional
Probab=98.08 E-value=1.2e-05 Score=91.33 Aligned_cols=36 Identities=22% Similarity=0.526 Sum_probs=33.3
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
..++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 4 ~~~~dV~IvGgG~~Gl~~A~~La~~G~~v~liE~~~ 39 (407)
T PRK06185 4 VETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHA 39 (407)
T ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 346999999999999999999999999999999973
No 266
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=98.07 E-value=4.5e-05 Score=90.01 Aligned_cols=34 Identities=32% Similarity=0.645 Sum_probs=32.5
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.++||||||+|.||++||+.+++.|.+|+|+||.
T Consensus 10 ~~~DVvVVG~G~AGl~AA~~aae~G~~VivlEk~ 43 (584)
T PRK12835 10 REVDVLVVGSGGGGMTAALTAAARGLDTLVVEKS 43 (584)
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEcC
Confidence 4689999999999999999999999999999997
No 267
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=98.07 E-value=3.2e-05 Score=90.02 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=34.6
Q ss_pred hcccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 386 IMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 386 ~m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.|++.|||+|||||..|+++|+.|+++|++|+|||++
T Consensus 2 ~~~~~~DVvIIGGGi~G~~~A~~la~rGl~V~LvEk~ 38 (508)
T PRK12266 2 TMMETYDLLVIGGGINGAGIARDAAGRGLSVLLCEQD 38 (508)
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCeEEEEecC
Confidence 4566799999999999999999999999999999997
No 268
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=98.06 E-value=2.6e-05 Score=79.16 Aligned_cols=98 Identities=23% Similarity=0.348 Sum_probs=68.3
Q ss_pred EEECCcHHHHHHHHHHHhcCCc-EEEEecCCcCCC--------------c-----------------------------c
Q psy9583 574 CIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNFLN--------------T-----------------------------V 609 (866)
Q Consensus 574 vVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~l~--------------~-----------------------------~ 609 (866)
+|||+|+.|+-+|..|.+.|.+ ++++++++.+.. . .
T Consensus 1 ~IIGaG~aGl~~a~~l~~~g~~~v~v~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (203)
T PF13738_consen 1 VIIGAGPAGLAAAAHLLERGIDPVVVLERNDRPGGVWRRYYSYTRLHSPSFFSSDFGLPDFESFSFDDSPEWRWPHDFPS 80 (203)
T ss_dssp EEE--SHHHHHHHHHHHHTT---EEEEESSSSSTTHHHCH-TTTT-BSSSCCTGGSS--CCCHSCHHHHHHHHHSBSSEB
T ss_pred CEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCeeEEeCCCCccccCccccccccCCcccccccccCCCCCCCcccCC
Confidence 6999999999999999999999 999998643310 0 0
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecc--ccCCCC
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR--IPNTNN 679 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~--~p~~~~ 679 (866)
.+++.+++++..++.+++++++++|+++..+++++.+++. ++. ++.||.||+|+|. .|+...
T Consensus 81 ~~~v~~yl~~~~~~~~l~i~~~~~V~~v~~~~~~w~v~~~--~~~------~~~a~~VVlAtG~~~~p~~p~ 144 (203)
T PF13738_consen 81 GEEVLDYLQEYAERFGLEIRFNTRVESVRRDGDGWTVTTR--DGR------TIRADRVVLATGHYSHPRIPD 144 (203)
T ss_dssp HHHHHHHHHHHHHHTTGGEETS--EEEEEEETTTEEEEET--TS-------EEEEEEEEE---SSCSB---S
T ss_pred HHHHHHHHHHHHhhcCcccccCCEEEEEEEeccEEEEEEE--ecc------eeeeeeEEEeeeccCCCCccc
Confidence 1345677888888999999999999999999888888775 554 7889999999996 555443
No 269
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. Members of this family are the enzyme 4-hydroxybenzoate 3-monooxygenase, also called p-hydroxybenzoate hydroxylase. It converts 4-hydroxybenzoate + NADPH + molecular oxygen to protocatechuate + NADPH + water. It contains monooxygenase (pfam01360) and FAD binding (pfam01494) domains. Pathways that contain this enzyme include the protocatechuate 4,5-degradation pathway.
Probab=98.06 E-value=9.1e-06 Score=91.51 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=31.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 3 ~dV~IVGaG~aGl~~A~~L~~~G~~v~viE~~~ 35 (390)
T TIGR02360 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQS 35 (390)
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCEEEEECCC
Confidence 899999999999999999999999999999984
No 270
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=98.05 E-value=4.7e-06 Score=93.76 Aligned_cols=33 Identities=30% Similarity=0.637 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+||||||+|+++|..|++.|++|+|||+.
T Consensus 2 ~~dV~IvGaG~aGl~lA~~L~~~G~~V~l~E~~ 34 (387)
T COG0654 2 MLDVAIVGAGPAGLALALALARAGLDVTLLERA 34 (387)
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Confidence 489999999999999999999999999999997
No 271
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=98.05 E-value=4.3e-05 Score=85.73 Aligned_cols=33 Identities=39% Similarity=0.649 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||+|||||+.|+++|++|++.|++|+|||++
T Consensus 3 ~~dv~IIGgGi~G~s~A~~L~~~g~~V~lie~~ 35 (376)
T PRK11259 3 RYDVIVIGLGSMGSAAGYYLARRGLRVLGLDRF 35 (376)
T ss_pred cccEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 499999999999999999999999999999997
No 272
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=98.04 E-value=0.00021 Score=81.40 Aligned_cols=56 Identities=11% Similarity=0.210 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
..+...+.+.+++.|+++++++.|++++.+++.+....+ ++. ++.+|.||+|+|..
T Consensus 201 ~~~~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~t--~~~------~~~a~~VV~a~G~~ 256 (416)
T PRK00711 201 QLFTQRLAAMAEQLGVKFRFNTPVDGLLVEGGRITGVQT--GGG------VITADAYVVALGSY 256 (416)
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEecCCEEEEEEe--CCc------EEeCCEEEECCCcc
Confidence 356677778888999999999999999877665432222 222 68899999999964
No 273
>PRK06753 hypothetical protein; Provisional
Probab=98.04 E-value=7.5e-06 Score=91.78 Aligned_cols=33 Identities=27% Similarity=0.525 Sum_probs=31.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+||+|||||+||+++|..|++.|++|+|+|+.+
T Consensus 1 ~~V~IvGgG~aGl~~A~~L~~~g~~v~v~E~~~ 33 (373)
T PRK06753 1 MKIAIIGAGIGGLTAAALLQEQGHEVKVFEKNE 33 (373)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 379999999999999999999999999999984
No 274
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional
Probab=98.02 E-value=0.00019 Score=75.51 Aligned_cols=167 Identities=20% Similarity=0.252 Sum_probs=102.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------------------------------------c-cH
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-------------------------------------V-DE 611 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-------------------------------------~-d~ 611 (866)
.-.|+|||+|+.|+-+|..+++.|.+|.++++.+.+... . ..
T Consensus 25 ~~DVvIVGgGpAGl~AA~~la~~G~~V~liEk~~~~Ggg~~~gg~~~~~~~v~~~~~~~l~~~gv~~~~~~~g~~~vd~~ 104 (257)
T PRK04176 25 EVDVAIVGAGPSGLTAAYYLAKAGLKVAVFERKLSFGGGMWGGGMLFNKIVVQEEADEILDEFGIRYKEVEDGLYVADSV 104 (257)
T ss_pred cCCEEEECccHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCccccccccchHHHHHHHHHCCCCceeecCcceeccHH
Confidence 357999999999999999999999999999987654210 0 13
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEE-EEEee----CCCCccceeEEEeccEEEEeeccccCCCCCCccc-
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVL-INYSN----KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK- 684 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-v~~~~----~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~- 684 (866)
++...+.+...+.|++++.++.+.++..+++ .+. +.+.. .++ ...+...+.++.||.|+|..........+.
T Consensus 105 ~l~~~L~~~A~~~Gv~I~~~t~V~dl~~~~~g~V~Gvv~~~~~v~~~g-~~~~~~~i~Ak~VI~ATG~~a~v~~~l~~~~ 183 (257)
T PRK04176 105 EAAAKLAAAAIDAGAKIFNGVSVEDVILREDPRVAGVVINWTPVEMAG-LHVDPLTIEAKAVVDATGHDAEVVSVLARKG 183 (257)
T ss_pred HHHHHHHHHHHHcCCEEEcCceeceeeEeCCCcEEEEEEccccccccC-CCCCcEEEEcCEEEEEeCCCcHHHHHHHHHc
Confidence 4455566777788999999999999876544 332 22110 011 111235799999999999654332100010
Q ss_pred --cCeeecCCC--------cEEeCCCCCCCCCCEEEecccCC----CCC--cHHHH-HHHHHHHHHHHhCC
Q psy9583 685 --IGLKVNENN--------FIIVNDNCETNIPNIYAIGDVVR----GPM--LAHKA-EEEGIMVAEHISGQ 738 (866)
Q Consensus 685 --~gl~~~~~G--------~i~Vd~~l~Ts~~~VyA~GD~a~----~~~--~~~~A-~~~g~~aa~~i~g~ 738 (866)
.+..+...+ ...|+.+-+ -+||+|++|=++. .|+ -...+ ..+|+.||+-|+.+
T Consensus 184 ~~~~~~~~g~~~~~~~~~e~~v~~~t~~-~~~g~~~~gm~~~~~~~~~rmg~~fg~m~~sg~~~a~~~~~~ 253 (257)
T PRK04176 184 PELGIEVPGEKSMWAERGEKLVVENTGE-VYPGLYVAGMAANAVHGLPRMGPIFGGMLLSGKKVAELILEK 253 (257)
T ss_pred CCcccccCCccccccCchHHHHHhcCCe-EcCCEEEeehhhhhhcCCCccCchhHhHHHhHHHHHHHHHHH
Confidence 111111111 122222222 3799999998874 232 23333 46788888887643
No 275
>PRK07236 hypothetical protein; Provisional
Probab=98.01 E-value=3.6e-05 Score=86.72 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=32.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 6 ~~~ViIVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (386)
T PRK07236 6 GPRAVVIGGSLGGLFAALLLRRAGWDVDVFERSP 39 (386)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4899999999999999999999999999999974
No 276
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.00 E-value=4.8e-05 Score=88.55 Aligned_cols=37 Identities=24% Similarity=0.298 Sum_probs=34.4
Q ss_pred hcccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 386 IMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 386 ~m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+|..++||+|||||+.|+++|+.|+++|++|+|+|++
T Consensus 2 ~~~~~~DVvIIGGGi~G~~~A~~la~rG~~V~LlEk~ 38 (502)
T PRK13369 2 AEPETYDLFVIGGGINGAGIARDAAGRGLKVLLCEKD 38 (502)
T ss_pred CCCcccCEEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 3556799999999999999999999999999999997
No 277
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=98.00 E-value=9.1e-05 Score=82.77 Aligned_cols=32 Identities=28% Similarity=0.518 Sum_probs=30.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+||+|||||.+|+++|++|++.|++|+|+|+.
T Consensus 1 ~dv~IIG~Gi~G~s~A~~L~~~G~~V~vle~~ 32 (365)
T TIGR03364 1 YDLIIVGAGILGLAHAYAAARRGLSVTVIERS 32 (365)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 58999999999999999999999999999997
No 278
>TIGR00292 thiazole biosynthesis enzyme. This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine.This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis.
Probab=97.98 E-value=0.00014 Score=76.18 Aligned_cols=167 Identities=22% Similarity=0.206 Sum_probs=103.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc--------------------------------------ccH
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT--------------------------------------VDE 611 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~--------------------------------------~d~ 611 (866)
.-+|+|||+|+.|+-+|..+++.|.+|.++++.+.+... ...
T Consensus 21 ~~DVvIVGgGpAGL~aA~~la~~G~~V~vlEk~~~~Ggg~~~gg~~~~~~~~~~~~~~~l~~~gi~~~~~~~g~~~~~~~ 100 (254)
T TIGR00292 21 ESDVIIVGAGPSGLTAAYYLAKNGLKVCVLERSLAFGGGSWGGGMLFSKIVVEKPAHEILDEFGIRYEDEGDGYVVADSA 100 (254)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCccccCCCcceecccccchHHHHHHHCCCCeeeccCceEEeeHH
Confidence 457999999999999999999999999999997654200 113
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC--eEE-EEEeeC----CCCccceeEEEeccEEEEeeccccCCCCCCccc
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE--NVL-INYSNK----STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK 684 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~~~-v~~~~~----~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~ 684 (866)
++.+.+.+...+.|++++.++.++++..+++ .+. +.+... .|. ..+...+.++.||.|+|.......+..+.
T Consensus 101 el~~~L~~~a~e~GV~I~~~t~V~dli~~~~~~~V~GVv~~~~~v~~~g~-~~d~~~i~Ak~VVdATG~~a~v~~~l~~~ 179 (254)
T TIGR00292 101 EFISTLASKALQAGAKIFNGTSVEDLITRDDTVGVAGVVINWSAIELAGL-HVDPLTQRSRVVVDATGHDAEIVAVCAKK 179 (254)
T ss_pred HHHHHHHHHHHHcCCEEECCcEEEEEEEeCCCCceEEEEeCCccccccCC-CCCCEEEEcCEEEEeecCCchHHHHHHHH
Confidence 4455666677788999999999999887655 232 222110 110 11245899999999999765432211222
Q ss_pred cCeeecC-----CCcEEeCC-------CCCCCCCCEEEecccCC----CCC--cHHHH-HHHHHHHHHHHhC
Q psy9583 685 IGLKVNE-----NNFIIVND-------NCETNIPNIYAIGDVVR----GPM--LAHKA-EEEGIMVAEHISG 737 (866)
Q Consensus 685 ~gl~~~~-----~G~i~Vd~-------~l~Ts~~~VyA~GD~a~----~~~--~~~~A-~~~g~~aa~~i~g 737 (866)
.++.... .+..+.+. +-+--+||+|++|=.+. .|+ -...+ ..+|+.||+.++.
T Consensus 180 ~~~~~~~~~~~g~~~~~~~~~e~~~~~~t~~~~~g~~~~gm~~~~~~~~~rmgp~fg~m~~sg~~~a~~~~~ 251 (254)
T TIGR00292 180 IVLEDQVPKLGGEKSMWAEVAEVAIHENTREVVPNLYVAGMAVAAVHGLPRMGPIFGGMLLSGKHVAEQILE 251 (254)
T ss_pred cCcccCCcccCCchhhhhhhhHHHHHhccCcccCCEEEechhhhhhcCCCCcCchHHHHHHhhHHHHHHHHH
Confidence 2221111 11122221 11124799999998774 232 23334 3678888887764
No 279
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated
Probab=97.98 E-value=1.1e-05 Score=94.99 Aligned_cols=34 Identities=32% Similarity=0.723 Sum_probs=32.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 10 ~~dV~IVGaGp~Gl~lA~~L~~~G~~v~v~Er~~ 43 (538)
T PRK06183 10 DTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWP 43 (538)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 5899999999999999999999999999999984
No 280
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=97.98 E-value=6.8e-05 Score=87.63 Aligned_cols=100 Identities=12% Similarity=0.165 Sum_probs=80.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecC--CcC--------C----CcccHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS--SNF--------L----NTVDEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~--~~~--------l----~~~d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
..+++|||||+.|+.+|..+++.|.+|+++... ..+ + ....+++.+.+.+.+++.|++++.++++.
T Consensus 211 ~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~V~ 290 (517)
T PRK15317 211 PYDVLVVGGGPAGAAAAIYAARKGIRTGIVAERFGGQVLDTMGIENFISVPETEGPKLAAALEEHVKEYDVDIMNLQRAS 290 (517)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCeeeccCcccccCCCCCCCHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 458999999999999999999999999999653 111 0 12356788889999999999999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
.+...++...+.+. ++. .+.+|.+++|+|.+|..
T Consensus 291 ~I~~~~~~~~V~~~--~g~------~i~a~~vViAtG~~~r~ 324 (517)
T PRK15317 291 KLEPAAGLIEVELA--NGA------VLKAKTVILATGARWRN 324 (517)
T ss_pred EEEecCCeEEEEEC--CCC------EEEcCEEEECCCCCcCC
Confidence 99887666666553 554 78999999999998754
No 281
>PRK07588 hypothetical protein; Provisional
Probab=97.97 E-value=1.7e-05 Score=89.45 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=31.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 1 ~~V~IVGgG~aGl~~A~~L~~~G~~v~v~E~~~ 33 (391)
T PRK07588 1 MKVAISGAGIAGPTLAYWLRRYGHEPTLIERAP 33 (391)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCceEEEeCCC
Confidence 379999999999999999999999999999973
No 282
>PTZ00383 malate:quinone oxidoreductase; Provisional
Probab=97.97 E-value=0.00016 Score=83.18 Aligned_cols=56 Identities=13% Similarity=0.180 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHH----cC--CEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 611 EEIAKKAFHLLNK----QG--LNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 611 ~~~~~~l~~~l~~----~G--V~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
..+...+.+.+++ .| +++++++.|++++..++ .+.+.. .+| ++.+|.||+|+|...
T Consensus 211 ~~L~~al~~~a~~~~~~~G~~v~i~~~t~V~~I~~~~~~~~~V~T--~~G-------~i~A~~VVvaAG~~S 273 (497)
T PTZ00383 211 QKLSESFVKHARRDALVPGKKISINLNTEVLNIERSNDSLYKIHT--NRG-------EIRARFVVVSACGYS 273 (497)
T ss_pred HHHHHHHHHHHHhhhhhcCCCEEEEeCCEEEEEEecCCCeEEEEE--CCC-------EEEeCEEEECcChhH
Confidence 3566777778887 67 88999999999998744 344443 233 689999999999543
No 283
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms.
Probab=97.96 E-value=0.00027 Score=80.27 Aligned_cols=34 Identities=29% Similarity=0.574 Sum_probs=31.3
Q ss_pred cccceeeecCCccHHHHHHHHHHC-CC-eEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQL-GF-KTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~-g~-~V~liek~ 422 (866)
+++||+|||||..|+++|++|++. |. +|+|||+.
T Consensus 29 ~~~dvvIIGgGi~G~s~A~~L~~~~g~~~V~vle~~ 64 (407)
T TIGR01373 29 PTYDVIIVGGGGHGLATAYYLAKEHGITNVAVLEKG 64 (407)
T ss_pred ccCCEEEECCcHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence 469999999999999999999995 85 89999996
No 284
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=97.95 E-value=8.4e-05 Score=86.76 Aligned_cols=101 Identities=13% Similarity=0.206 Sum_probs=80.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecC--CcCC------------CcccHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS--SNFL------------NTVDEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~--~~~l------------~~~d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
..+|+|||||+.|+.+|..+++.|.+|+++... ..+. ....+++.+.+.+.+++.|++++.+++|+
T Consensus 212 ~~dVvIIGgGpAGl~AA~~la~~G~~v~li~~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~gv~i~~~~~V~ 291 (515)
T TIGR03140 212 PYDVLVVGGGPAGAAAAIYAARKGLRTAMVAERIGGQVKDTVGIENLISVPYTTGSQLAANLEEHIKQYPIDLMENQRAK 291 (515)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCccccCcCcccccccCCCCHHHHHHHHHHHHHHhCCeEEcCCEEE
Confidence 578999999999999999999999999998641 1111 02356778888899999999999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
++..+++.+.+.+. +|. .+.+|.+++|+|..|...
T Consensus 292 ~I~~~~~~~~v~~~--~g~------~i~~d~lIlAtGa~~~~~ 326 (515)
T TIGR03140 292 KIETEDGLIVVTLE--SGE------VLKAKSVIVATGARWRKL 326 (515)
T ss_pred EEEecCCeEEEEEC--CCC------EEEeCEEEECCCCCcCCC
Confidence 99876666666553 554 799999999999987543
No 285
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning]
Probab=97.94 E-value=3.5e-06 Score=92.93 Aligned_cols=34 Identities=41% Similarity=0.592 Sum_probs=31.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..|||+|||||.||+.||..+++.|.+++|+.-+
T Consensus 3 ~~~DVIVIGgGHAG~EAA~AaARmG~ktlLlT~~ 36 (621)
T COG0445 3 KEYDVIVIGGGHAGVEAALAAARMGAKTLLLTLN 36 (621)
T ss_pred CCCceEEECCCccchHHHHhhhccCCeEEEEEcC
Confidence 3599999999999999999999999999999765
No 286
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional
Probab=97.94 E-value=0.00012 Score=85.52 Aligned_cols=32 Identities=31% Similarity=0.558 Sum_probs=31.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||||||+| ||++||.++++.|.+|+||||.
T Consensus 7 ~~DVvVVG~G-aGl~aA~~aa~~G~~V~vlEk~ 38 (513)
T PRK12837 7 EVDVLVAGSG-GGVAGAYTAAREGLSVALVEAT 38 (513)
T ss_pred ccCEEEECch-HHHHHHHHHHHCCCcEEEEecC
Confidence 5899999999 9999999999999999999997
No 287
>KOG1335|consensus
Probab=97.93 E-value=0.00044 Score=73.16 Aligned_cols=146 Identities=21% Similarity=0.261 Sum_probs=89.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||..||..+.--.++|.+|+++|-. +.+||..
T Consensus 212 k~~~viG~G~IGLE~gsV~~rLGseVT~VEf~------~~i~~~m----------------------------------- 250 (506)
T KOG1335|consen 212 KKLTVIGAGYIGLEMGSVWSRLGSEVTVVEFL------DQIGGVM----------------------------------- 250 (506)
T ss_pred ceEEEEcCceeeeehhhHHHhcCCeEEEEEeh------hhhcccc-----------------------------------
Confidence 67999999999999999999999999999975 4555421
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCc-ccEEEEEc-CCc--eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNN-FHEIQIIN-KTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~-~~~v~v~~-~~g--~~i~~d~lViATGs~p~~ 546 (866)
+.+..+ .++..+.+.|+++..++.+.....+.+ .-.+++.. .++ +++++|.|++++|-+|+.
T Consensus 251 D~Eisk--------------~~qr~L~kQgikF~l~tkv~~a~~~~dg~v~i~ve~ak~~k~~tle~DvlLVsiGRrP~t 316 (506)
T KOG1335|consen 251 DGEISK--------------AFQRVLQKQGIKFKLGTKVTSATRNGDGPVEIEVENAKTGKKETLECDVLLVSIGRRPFT 316 (506)
T ss_pred CHHHHH--------------HHHHHHHhcCceeEeccEEEEeeccCCCceEEEEEecCCCceeEEEeeEEEEEccCcccc
Confidence 011111 234467789999999999884332222 22344433 222 789999999999999984
Q ss_pred CCCCcCCCceEecchhhhcc------ccCCCeEEEECCcHHHHHHHHHHHhcC
Q psy9583 547 FPGVKFDENLILSNKGALEM------INVPKKLCIIGAGVIGLEIGSIWRRLG 593 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~------~~~~~~vvVIGgG~~glE~A~~l~~~g 593 (866)
.+++++...+.. +...+. ...-.++-.||--..|--+|.-..+.|
T Consensus 317 -~GLgle~iGi~~-D~r~rv~v~~~f~t~vP~i~~IGDv~~gpMLAhkAeeeg 367 (506)
T KOG1335|consen 317 -EGLGLEKIGIEL-DKRGRVIVNTRFQTKVPHIYAIGDVTLGPMLAHKAEEEG 367 (506)
T ss_pred -cCCChhhccccc-ccccceeccccccccCCceEEecccCCcchhhhhhhhhc
Confidence 344433322211 111111 011235666775555555554444444
No 288
>PRK06996 hypothetical protein; Provisional
Probab=97.93 E-value=1.6e-05 Score=89.99 Aligned_cols=35 Identities=34% Similarity=0.563 Sum_probs=31.4
Q ss_pred cccceeeecCCccHHHHHHHHHHCC----CeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLG----FKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g----~~V~liek~~ 423 (866)
..+||+||||||+|+++|..|++.| ++|+|+|+.+
T Consensus 10 ~~~dv~IvGgGpaG~~~A~~L~~~g~~~g~~v~l~e~~~ 48 (398)
T PRK06996 10 PDFDIAIVGAGPVGLALAGWLARRSATRALSIALIDARE 48 (398)
T ss_pred CCCCEEEECcCHHHHHHHHHHhcCCCcCCceEEEecCCC
Confidence 3589999999999999999999987 4799999973
No 289
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=97.91 E-value=6.3e-05 Score=86.46 Aligned_cols=104 Identities=22% Similarity=0.384 Sum_probs=75.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcC------CCcc-----c--HHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNF------LNTV-----D--EEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~------l~~~-----d--~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
++++|||||+.|+.+|..|++++. +|+++++.+.+ ++.+ + .++.....+.+++.|+++++++.|+
T Consensus 1 ~~vvIIGgG~aGl~aA~~l~~~~~~~~Vtli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~V~ 80 (444)
T PRK09564 1 MKIIIIGGTAAGMSAAAKAKRLNKELEITVYEKTDIVSFGACGLPYFVGGFFDDPNTMIARTPEEFIKSGIDVKTEHEVV 80 (444)
T ss_pred CeEEEECCcHHHHHHHHHHHHHCCCCcEEEEECCCcceeecCCCceEeccccCCHHHhhcCCHHHHHHCCCeEEecCEEE
Confidence 479999999999999999998864 89999998764 1111 1 1233344567888999999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
++..++..+.+.-. .++. ...+.+|.+|+|||.+|+...
T Consensus 81 ~id~~~~~v~~~~~-~~~~----~~~~~yd~lviAtG~~~~~~~ 119 (444)
T PRK09564 81 KVDAKNKTITVKNL-KTGS----IFNDTYDKLMIATGARPIIPP 119 (444)
T ss_pred EEECCCCEEEEEEC-CCCC----EEEecCCEEEECCCCCCCCCC
Confidence 99877665554321 1233 123349999999999987654
No 290
>PRK06126 hypothetical protein; Provisional
Probab=97.91 E-value=0.00012 Score=86.32 Aligned_cols=34 Identities=21% Similarity=0.500 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||+||||||+|+++|..|+++|++|+|||+.+
T Consensus 7 ~~~VlIVGaGpaGL~~Al~La~~G~~v~viEr~~ 40 (545)
T PRK06126 7 ETPVLIVGGGPVGLALALDLGRRGVDSILVERKD 40 (545)
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999999999999874
No 291
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.90 E-value=4e-05 Score=85.84 Aligned_cols=32 Identities=25% Similarity=0.531 Sum_probs=31.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 2 ~dV~IvGgG~~Gl~~A~~L~~~G~~v~l~E~~ 33 (374)
T PRK06617 2 SNTVILGCGLSGMLTALSFAQKGIKTTIFESK 33 (374)
T ss_pred ccEEEECCCHHHHHHHHHHHcCCCeEEEecCC
Confidence 79999999999999999999999999999986
No 292
>PTZ00363 rab-GDP dissociation inhibitor; Provisional
Probab=97.90 E-value=9.3e-05 Score=83.73 Aligned_cols=61 Identities=10% Similarity=0.151 Sum_probs=47.0
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
..++.+.+.+.++..|..+++++.|++|..++++....+...+|+ ++.++.||....+.|.
T Consensus 231 ~g~L~qal~r~~a~~Gg~~~L~~~V~~I~~~~~g~~~~V~~~~Ge------~i~a~~VV~~~s~~p~ 291 (443)
T PTZ00363 231 LGGLPQAFSRLCAIYGGTYMLNTPVDEVVFDENGKVCGVKSEGGE------VAKCKLVICDPSYFPD 291 (443)
T ss_pred HHHHHHHHHHHHHHcCcEEEcCCeEEEEEEcCCCeEEEEEECCCc------EEECCEEEECcccccc
Confidence 457888888888999999999999999987754433333334665 7899999998777765
No 293
>PRK12843 putative FAD-binding dehydrogenase; Reviewed
Probab=97.90 E-value=0.00025 Score=83.81 Aligned_cols=44 Identities=39% Similarity=0.559 Sum_probs=39.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceec
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVG 439 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g 439 (866)
++||+|||+|++|++||..+++.|.+|+||||. ..+||.+...+
T Consensus 16 ~~dvvvvG~G~aG~~aa~~~~~~g~~v~l~ek~------~~~gg~~~~s~ 59 (578)
T PRK12843 16 EFDVIVIGAGAAGMSAALFAAIAGLKVLLVERT------EYVGGTTATSA 59 (578)
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEecC------CCCCCcccccC
Confidence 589999999999999999999999999999997 56788775554
No 294
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases.; PDB: 2I0Z_A 3V76_A 2GQF_A.
Probab=97.89 E-value=6.2e-05 Score=84.22 Aligned_cols=97 Identities=20% Similarity=0.306 Sum_probs=65.2
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc--------------------------------------c----
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT--------------------------------------V---- 609 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~--------------------------------------~---- 609 (866)
+|+|||||+.|+-+|..+++.|.+|.++++++++..- +
T Consensus 2 dviIIGgGaAGl~aA~~aa~~g~~V~vlE~~~~~gkKil~tG~GrCN~tn~~~~~~~~~~~~~~~~~f~~~~l~~f~~~d 81 (409)
T PF03486_consen 2 DVIIIGGGAAGLMAAITAAEKGARVLVLERNKRVGKKILITGNGRCNLTNLNIDPSEFLSGYGRNPKFLKSALKRFSPED 81 (409)
T ss_dssp SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS-HHHHHCGGGT-EEEETTSSGGGEECS-TBTTTCTHHHHHHS-HHH
T ss_pred cEEEECCCHHHHHHHHHHHhCCCCEEEEeCCcccccceeecCCCCccccccccchhhHhhhcccchHHHHHHHhcCCHHH
Confidence 5899999999999999999999999999987643110 0
Q ss_pred --------------------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEE
Q psy9583 610 --------------------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITS 662 (866)
Q Consensus 610 --------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~ 662 (866)
..++.+.+.+.+++.||+++++++|.+++.++++ +.+.+. ++. .+
T Consensus 82 ~~~ff~~~Gv~~~~~~~gr~fP~s~~a~~Vv~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~f~v~~~--~~~------~~ 153 (409)
T PF03486_consen 82 LIAFFEELGVPTKIEEDGRVFPKSDKASSVVDALLEELKRLGVEIHFNTRVKSIEKKEDGVFGVKTK--NGG------EY 153 (409)
T ss_dssp HHHHHHHTT--EEE-STTEEEETT--HHHHHHHHHHHHHHHT-EEE-S--EEEEEEETTEEEEEEET--TTE------EE
T ss_pred HHHHHHhcCCeEEEcCCCEECCCCCcHHHHHHHHHHHHHHcCCEEEeCCEeeeeeecCCceeEeecc--Ccc------cc
Confidence 0445677778889999999999999999987776 566552 333 89
Q ss_pred eccEEEEeeccccC
Q psy9583 663 IFDKLLIAIGRIPN 676 (866)
Q Consensus 663 ~~D~vi~a~G~~p~ 676 (866)
.+|.||+|+|-...
T Consensus 154 ~a~~vILAtGG~S~ 167 (409)
T PF03486_consen 154 EADAVILATGGKSY 167 (409)
T ss_dssp EESEEEE----SSS
T ss_pred cCCEEEEecCCCCc
Confidence 99999999997654
No 295
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=97.89 E-value=0.00011 Score=82.77 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=32.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.++||+|||||.+|+++|++|++.|.+|+++|++.
T Consensus 3 ~~~~vvVIGgGi~Gls~A~~La~~G~~V~vie~~~ 37 (387)
T COG0665 3 MKMDVVIIGGGIVGLSAAYYLAERGADVTVLEAGE 37 (387)
T ss_pred CcceEEEECCcHHHHHHHHHHHHcCCEEEEEecCc
Confidence 35999999999999999999999999999999973
No 296
>PRK08132 FAD-dependent oxidoreductase; Provisional
Probab=97.88 E-value=4.2e-05 Score=90.28 Aligned_cols=34 Identities=38% Similarity=0.593 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 23 ~~dVlIVGaGpaGl~lA~~L~~~G~~v~viE~~~ 56 (547)
T PRK08132 23 RHPVVVVGAGPVGLALAIDLAQQGVPVVLLDDDD 56 (547)
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5899999999999999999999999999999973
No 297
>PRK06847 hypothetical protein; Provisional
Probab=97.88 E-value=0.00016 Score=81.03 Aligned_cols=101 Identities=23% Similarity=0.369 Sum_probs=79.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC------------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------------------------------ 607 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------ 607 (866)
.++|+|||||+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 4 ~~~V~IVGaG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~g~ 83 (375)
T PRK06847 4 VKKVLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDECLEAGFGFDGVDLFDPDGT 83 (375)
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCccCCceeeecHHHHHHHHHcCCHHHHHHhCCCccceEEECCCCC
Confidence 57899999999999999999999999999987653100
Q ss_pred ---cc-----------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEE
Q psy9583 608 ---TV-----------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKL 667 (866)
Q Consensus 608 ---~~-----------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~v 667 (866)
.+ .+++.+.+.+.+.+.|+++++++++++++.+++.+.+.+. +|. ++.+|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~v~~~--~g~------~~~ad~v 155 (375)
T PRK06847 84 LLAELPTPRLAGDDLPGGGGIMRPALARILADAARAAGADVRLGTTVTAIEQDDDGVTVTFS--DGT------TGRYDLV 155 (375)
T ss_pred EEEecCcccccccCCCCcccCcHHHHHHHHHHHHHHhCCEEEeCCEEEEEEEcCCEEEEEEc--CCC------EEEcCEE
Confidence 00 1344566667777789999999999999887777766664 565 7899999
Q ss_pred EEeeccccCCC
Q psy9583 668 LIAIGRIPNTN 678 (866)
Q Consensus 668 i~a~G~~p~~~ 678 (866)
|.|.|..+...
T Consensus 156 I~AdG~~s~~r 166 (375)
T PRK06847 156 VGADGLYSKVR 166 (375)
T ss_pred EECcCCCcchh
Confidence 99999877553
No 298
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=97.87 E-value=1.9e-05 Score=79.64 Aligned_cols=39 Identities=23% Similarity=0.413 Sum_probs=34.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
.+|+|||+|+||++||..|++.|.+|+||||+ ..+||..
T Consensus 2 ~siaIVGaGiAGl~aA~~L~~aG~~vtV~eKg------~GvGGRl 40 (331)
T COG3380 2 PSIAIVGAGIAGLAAAYALREAGREVTVFEKG------RGVGGRL 40 (331)
T ss_pred CcEEEEccchHHHHHHHHHHhcCcEEEEEEcC------CCcccch
Confidence 46999999999999999999999999999998 4566654
No 299
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional
Probab=97.87 E-value=0.00037 Score=81.86 Aligned_cols=61 Identities=8% Similarity=0.057 Sum_probs=43.6
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEee-CCCCccceeEEEeccEEEEeeccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSN-KSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
+..+...+.....++|+++++++.|+++..+++.+. +.+.+ .+++ ...+.+|.||.|+|.-
T Consensus 148 p~rl~~al~~~A~~~Ga~i~~~t~V~~i~~~~~~v~gv~v~d~~~g~----~~~i~A~~VVnAaG~w 210 (546)
T PRK11101 148 PFRLTAANMLDAKEHGAQILTYHEVTGLIREGDTVCGVRVRDHLTGE----TQEIHAPVVVNAAGIW 210 (546)
T ss_pred HHHHHHHHHHHHHhCCCEEEeccEEEEEEEcCCeEEEEEEEEcCCCc----EEEEECCEEEECCChh
Confidence 344555666777889999999999999987766543 44432 1222 2479999999999964
No 300
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Probab=97.87 E-value=2.8e-05 Score=88.98 Aligned_cols=33 Identities=30% Similarity=0.593 Sum_probs=30.9
Q ss_pred cceeeecCCccHHHHHHHHHH----CCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQ----LGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~----~g~~V~liek~~ 423 (866)
|||+||||||+|+++|..|++ .|++|+|||+.+
T Consensus 1 ~DV~IVGaGp~Gl~~A~~La~~~~~~G~~v~viE~~~ 37 (437)
T TIGR01989 1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVD 37 (437)
T ss_pred CcEEEECCcHHHHHHHHHHhcCcccCCCeEEEEeCCC
Confidence 699999999999999999998 799999999953
No 301
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=97.86 E-value=0.00015 Score=83.77 Aligned_cols=99 Identities=17% Similarity=0.245 Sum_probs=68.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..+++.|.+|+||++.+ .+...
T Consensus 175 ~~~v~IiGgG~~g~E~A~~l~~~g~~Vtli~~~~------~~l~~----------------------------------- 213 (461)
T PRK05249 175 PRSLIIYGAGVIGCEYASIFAALGVKVTLINTRD------RLLSF----------------------------------- 213 (461)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCC------CcCCc-----------------------------------
Confidence 3689999999999999999999999999999862 21100
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.+.++ ...+...+++.|++++.+..+. +.. ....+.+...++.++.+|.|++|+|.+|..
T Consensus 214 ~d~~~--------------~~~l~~~l~~~gI~v~~~~~v~~i~~---~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 274 (461)
T PRK05249 214 LDDEI--------------SDALSYHLRDSGVTIRHNEEVEKVEG---GDDGVIVHLKSGKKIKADCLLYANGRTGNT 274 (461)
T ss_pred CCHHH--------------HHHHHHHHHHcCCEEEECCEEEEEEE---eCCeEEEEECCCCEEEeCEEEEeecCCccc
Confidence 00000 1112344667899999887665 321 123445544556789999999999998874
No 302
>PTZ00306 NADH-dependent fumarate reductase; Provisional
Probab=97.86 E-value=5.8e-05 Score=95.98 Aligned_cols=41 Identities=32% Similarity=0.441 Sum_probs=36.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
.++||||||+|.||++||.++++.|.+|+|+||. ...||.+
T Consensus 408 ~~~DVvVVG~G~AGl~AAi~Aae~Ga~VivlEK~------~~~GG~s 448 (1167)
T PTZ00306 408 LPARVIVVGGGLAGCSAAIEAASCGAQVILLEKE------AKLGGNS 448 (1167)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEEcc------CCCCCch
Confidence 3589999999999999999999999999999998 4566654
No 303
>TIGR01789 lycopene_cycl lycopene cyclase. This model represents a family of bacterial lycopene cyclases catalyzing the transformation of lycopene to carotene. These enzymes are found in a limited spectrum of alpha and gamma proteobacteria as well as Flavobacterium.
Probab=97.86 E-value=4.5e-05 Score=84.96 Aligned_cols=31 Identities=29% Similarity=0.585 Sum_probs=29.8
Q ss_pred ceeeecCCccHHHHHHHHHHC--CCeEEEEecc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQL--GFKTACIDEW 422 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~ 422 (866)
||+|||||+||+++|.+|++. |++|+++|+.
T Consensus 1 DviIvGaG~AGl~lA~~L~~~~~g~~V~lle~~ 33 (370)
T TIGR01789 1 DCIIVGGGLAGGLIALRLQRARPDFRIRVIEAG 33 (370)
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 799999999999999999987 9999999997
No 304
>KOG2415|consensus
Probab=97.85 E-value=6.9e-05 Score=79.64 Aligned_cols=47 Identities=34% Similarity=0.658 Sum_probs=38.7
Q ss_pred cccceeeecCCccHHHHHHHHHHC------CCeEEEEeccCCCcccccCCCccceeccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQL------GFKTACIDEWKDNEENFALGGTCTNVGCI 441 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~------g~~V~liek~~~~~~~~~~GG~~~~~g~~ 441 (866)
..+||+|||||||||+||++|+++ ..+|.++||. ..+||-.+.-.++
T Consensus 75 e~~Dv~IVG~GPAGLsaAIrlKQla~~~~~dlrVcvvEKa------a~~GghtlSGavi 127 (621)
T KOG2415|consen 75 EEVDVVIVGAGPAGLSAAIRLKQLAAKANKDLRVCVVEKA------AEVGGHTLSGAVI 127 (621)
T ss_pred ccccEEEECCCchhHHHHHHHHHHHHhcCCceEEEEEeec------cccCCceecceee
Confidence 459999999999999999999876 4689999998 6788766554443
No 305
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=97.85 E-value=0.00019 Score=83.06 Aligned_cols=179 Identities=17% Similarity=0.178 Sum_probs=98.0
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+|+|||+|+.|+.+|..|++.|.+|++|++.+ .+.. +.
T Consensus 184 ~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~------~~l~------~~----------------------------- 222 (475)
T PRK06327 184 KKLAVIGAGVIGLELGSVWRRLGAEVTILEALP------AFLA------AA----------------------------- 222 (475)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCC------ccCC------cC-----------------------------
Confidence 579999999999999999999999999999862 1100 00
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEE--cCCc--eEEEecEEEEecCCCCc
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQII--NKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~--~~~g--~~i~~d~lViATGs~p~ 545 (866)
..++ ...+...+++.||+++.++.+. +.. ....+.+. ..++ ..+.+|.|++|+|..|.
T Consensus 223 d~~~--------------~~~~~~~l~~~gi~i~~~~~v~~i~~---~~~~v~v~~~~~~g~~~~i~~D~vl~a~G~~p~ 285 (475)
T PRK06327 223 DEQV--------------AKEAAKAFTKQGLDIHLGVKIGEIKT---GGKGVSVAYTDADGEAQTLEVDKLIVSIGRVPN 285 (475)
T ss_pred CHHH--------------HHHHHHHHHHcCcEEEeCcEEEEEEE---cCCEEEEEEEeCCCceeEEEcCEEEEccCCccC
Confidence 0000 0112334667899999887655 322 11233333 2223 57999999999999987
Q ss_pred CCC-C-----CcCCCceEecchhhhccccCCCeEEEECCcHH-----------HHHHHHHHHhcCCcEEEEecCCcCCCc
Q psy9583 546 SFP-G-----VKFDENLILSNKGALEMINVPKKLCIIGAGVI-----------GLEIGSIWRRLGSEVTILEMSSNFLNT 608 (866)
Q Consensus 546 ~~p-~-----~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~-----------glE~A~~l~~~g~~Vtli~~~~~~l~~ 608 (866)
... . ...+....+..++.. ....+.|-.+|.... |..+|..+.....++. ...-+..+ .
T Consensus 286 ~~~l~~~~~g~~~~~~G~i~vd~~~--~Ts~~~VyA~GD~~~~~~~~~~A~~~G~~aa~~i~g~~~~~~-~~~~p~~~-~ 361 (475)
T PRK06327 286 TDGLGLEAVGLKLDERGFIPVDDHC--RTNVPNVYAIGDVVRGPMLAHKAEEEGVAVAERIAGQKGHID-YNTIPWVI-Y 361 (475)
T ss_pred CCCCCcHhhCceeCCCCeEeECCCC--ccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHcCCCCCCC-CCCCCeEE-e
Confidence 431 1 111111112122111 122456777775322 4444555443222110 00111111 2
Q ss_pred ccHHHHH--HHHHHHHHcCCEEEeC
Q psy9583 609 VDEEIAK--KAFHLLNKQGLNIILN 631 (866)
Q Consensus 609 ~d~~~~~--~l~~~l~~~GV~i~~~ 631 (866)
.++++.. ..++.+++.|+++...
T Consensus 362 ~~pe~a~vGlte~~a~~~g~~~~~~ 386 (475)
T PRK06327 362 TSPEIAWVGKTEQQLKAEGVEYKAG 386 (475)
T ss_pred CCcceEEEeCCHHHHHHcCCCEEEE
Confidence 3556554 5567777888876644
No 306
>PRK05868 hypothetical protein; Validated
Probab=97.84 E-value=2.2e-05 Score=87.84 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=31.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 2 ~~V~IvGgG~aGl~~A~~L~~~G~~v~viE~~~ 34 (372)
T PRK05868 2 KTVVVSGASVAGTAAAYWLGRHGYSVTMVERHP 34 (372)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Confidence 689999999999999999999999999999974
No 307
>PRK07846 mycothione reductase; Reviewed
Probab=97.82 E-value=0.00021 Score=82.04 Aligned_cols=185 Identities=10% Similarity=0.072 Sum_probs=101.3
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCcc-------ccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCe
Q psy9583 283 TMSIADIEKKINEFINKAQDNKLLPE-------EMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNN 355 (866)
Q Consensus 283 ~~~~~~i~~~~~~~~~~~~~~~l~~~-------~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~ 355 (866)
+.++.++.+..++.+++.+.+..... ++-.|+.++.+-...-+.... .+ .....|||.|+-...|.+.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~V~v~~g~-~~-~~d~lViATGs~p~~p~i~g~~ 149 (451)
T PRK07846 72 GVRWPDIVSRVFGRIDPIAAGGEEYRGRDTPNIDVYRGHARFIGPKTLRTGDGE-EI-TADQVVIAAGSRPVIPPVIADS 149 (451)
T ss_pred cCCHHHHHHHHHHHHHHHhccchhhhhhhhCCcEEEEEEEEEecCCEEEECCCC-EE-EeCEEEEcCCCCCCCCCCCCcC
Confidence 35888999998888888766422111 111133332221111000000 12 3466789999765444332211
Q ss_pred eEeeeeeeeeecccccccccchhhhhhhhhhcccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 356 VVIRPINYFALSYDHRIIDGREAVLSLMSFIMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 356 ~~ir~~~~~~l~~dhr~~dg~~a~~~~~~~~m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
. ..+.+..+...... ...+++|||||+.|+.+|..|++.|.+|+|+++.+ .+.
T Consensus 150 ----~---------~~~~~~~~~~~l~~-----~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~~------~ll--- 202 (451)
T PRK07846 150 ----G---------VRYHTSDTIMRLPE-----LPESLVIVGGGFIAAEFAHVFSALGVRVTVVNRSG------RLL--- 202 (451)
T ss_pred ----C---------ccEEchHHHhhhhh-----cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC------ccc---
Confidence 0 01111112111111 12679999999999999999999999999999862 110
Q ss_pred ceeccccchhHHHhhHHHHHHhhhhhhcCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccc
Q psy9583 436 TNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKI 514 (866)
Q Consensus 436 ~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~ 514 (866)
|. ...++.. .+..++ +.+++++.+..+. ++.
T Consensus 203 ------~~--------------------------~d~~~~~--------------~l~~l~-~~~v~i~~~~~v~~i~~- 234 (451)
T PRK07846 203 ------RH--------------------------LDDDISE--------------RFTELA-SKRWDVRLGRNVVGVSQ- 234 (451)
T ss_pred ------cc--------------------------cCHHHHH--------------HHHHHH-hcCeEEEeCCEEEEEEE-
Confidence 00 0000000 011122 3578888876655 321
Q ss_pred cCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 515 QNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 515 ~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+.+.+...++.++.+|.|++|+|..|..
T Consensus 235 --~~~~v~v~~~~g~~i~~D~vl~a~G~~pn~ 264 (451)
T PRK07846 235 --DGSGVTLRLDDGSTVEADVLLVATGRVPNG 264 (451)
T ss_pred --cCCEEEEEECCCcEeecCEEEEEECCccCc
Confidence 223455555567789999999999999874
No 308
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent [].; PDB: 2PYX_B 2OAL_B 2E4G_A 2OAM_A 2OA1_B 2O9Z_A 3I3L_A 2AQJ_A 2ARD_A 2JKC_A ....
Probab=97.81 E-value=0.00031 Score=80.32 Aligned_cols=60 Identities=15% Similarity=0.181 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
..+.+.|.+...+.||+++.++ |+.+..++++....+...+|. ++.+|.+|=|+|++...
T Consensus 154 ~~fd~~L~~~A~~~Gv~~~~g~-V~~v~~~~~g~i~~v~~~~g~------~i~ad~~IDASG~~s~L 213 (454)
T PF04820_consen 154 AKFDQFLRRHAEERGVEVIEGT-VVDVELDEDGRITAVRLDDGR------TIEADFFIDASGRRSLL 213 (454)
T ss_dssp HHHHHHHHHHHHHTT-EEEET--EEEEEE-TTSEEEEEEETTSE------EEEESEEEE-SGGG-CC
T ss_pred HHHHHHHHHHHhcCCCEEEeCE-EEEEEEcCCCCEEEEEECCCC------EEEEeEEEECCCccchh
Confidence 4556777788888999999875 777766655544444444665 89999999999997643
No 309
>TIGR03077 not_gcvH glycine cleavage protein H-like protein, Chlamydial. The H protein (GcvH) of the glycine cleavage system shuttles the methylamine group of glycine from the P protein to the T protein. Most Chlamydia but lack the P and T proteins, and have a single homolog of GcvH that appears deeply split from canonical GcvH in molecular phylogenetic trees. The protein family modeled here is observed the Chlamydial GcvH homolog, so far always seen as part of a two-gene operon, downstream of a member of the uncharacterized protein family TIGR03076. The function of this protein is unknown.
Probab=97.81 E-value=3.2e-05 Score=68.79 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=39.8
Q ss_pred EEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC
Q psy9583 19 TLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS 66 (866)
Q Consensus 19 ~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~ 66 (866)
.-+++ .++|+.|++||++++||++|+..+|.||.+|+|.+++-+..+
T Consensus 33 ~~v~l-p~~G~~V~~g~~i~~IEs~K~~~ei~sP~sG~Vv~vN~~l~~ 79 (110)
T TIGR03077 33 LHIDL-PSVGSSCKEGEVLVILESSKSAIEVLSPVSGEVIEVNIALED 79 (110)
T ss_pred EEEEC-CCCCCEEcCCCEEEEEEeccEEEEEeCCCCEEEEEEHHHhhh
Confidence 34455 377999999999999999999999999999999998655444
No 310
>PLN02985 squalene monooxygenase
Probab=97.81 E-value=5.3e-05 Score=87.91 Aligned_cols=34 Identities=35% Similarity=0.487 Sum_probs=32.4
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..+||+|||||++|+++|..|++.|++|+|+||.
T Consensus 42 ~~~DViIVGAG~aGlalA~aLa~~G~~V~vlEr~ 75 (514)
T PLN02985 42 GATDVIIVGAGVGGSALAYALAKDGRRVHVIERD 75 (514)
T ss_pred CCceEEEECCCHHHHHHHHHHHHcCCeEEEEECc
Confidence 4689999999999999999999999999999997
No 311
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=97.80 E-value=7.6e-05 Score=90.01 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=31.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||||.+|+++|++|+++|.+|+|+|+.
T Consensus 260 ~~dVvIIGaGIaG~s~A~~La~~G~~V~VlE~~ 292 (662)
T PRK01747 260 ARDAAIIGGGIAGAALALALARRGWQVTLYEAD 292 (662)
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEecC
Confidence 379999999999999999999999999999997
No 312
>PRK14694 putative mercuric reductase; Provisional
Probab=97.79 E-value=0.00046 Score=79.74 Aligned_cols=96 Identities=19% Similarity=0.256 Sum_probs=66.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||+|+.|+..|..|++.|.+|+++++.+ .+ |. .
T Consensus 179 ~~vvViG~G~~G~E~A~~l~~~g~~Vtlv~~~~------~l----------~~--------------------------~ 216 (468)
T PRK14694 179 ERLLVIGASVVALELAQAFARLGSRVTVLARSR------VL----------SQ--------------------------E 216 (468)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEECCC------CC----------CC--------------------------C
Confidence 579999999999999999999999999998641 11 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..++ ...+...+++.||+++.+..+. +.. ....+.+.++++ ++.+|.||+|+|..|..
T Consensus 217 ~~~~--------------~~~l~~~l~~~GI~v~~~~~v~~i~~---~~~~~~v~~~~~-~i~~D~vi~a~G~~pn~ 275 (468)
T PRK14694 217 DPAV--------------GEAIEAAFRREGIEVLKQTQASEVDY---NGREFILETNAG-TLRAEQLLVATGRTPNT 275 (468)
T ss_pred CHHH--------------HHHHHHHHHhCCCEEEeCCEEEEEEE---cCCEEEEEECCC-EEEeCEEEEccCCCCCc
Confidence 0000 1113445777899999886655 322 223444544443 69999999999999874
No 313
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase. This membrane-associated enzyme is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase.
Probab=97.77 E-value=0.00049 Score=79.28 Aligned_cols=62 Identities=13% Similarity=0.174 Sum_probs=45.2
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEEEEEee-CCCCccceeEEEeccEEEEeecccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+..+...+.+.+++.|+++++++.|++++.+++ .+.+.+.. .+|. ..++.+|.||+|+|...
T Consensus 177 p~~l~~aL~~~a~~~Gv~i~~~t~V~~i~~~~~~~v~v~~~~~~~g~----~~~i~A~~VV~AAG~~s 240 (483)
T TIGR01320 177 FGALTKQLLGYLVQNGTTIRFGHEVRNLKRQSDGSWTVTVKNTRTGG----KRTLNTRFVFVGAGGGA 240 (483)
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCeEEEEEeeccCCc----eEEEECCEEEECCCcch
Confidence 356677888888889999999999999987543 45554432 1221 23689999999999643
No 314
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=97.76 E-value=0.00013 Score=61.78 Aligned_cols=31 Identities=35% Similarity=0.421 Sum_probs=29.8
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+++|||||+.|+.+|..|++.|.+|+||++.
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEECcCHHHHHHHHHHHHhCcEEEEEecc
Confidence 4899999999999999999999999999997
No 315
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=97.76 E-value=6.9e-05 Score=85.24 Aligned_cols=32 Identities=19% Similarity=0.363 Sum_probs=29.9
Q ss_pred ceeeecCCccHHHHHHHHHHCC-CeEEEEeccC
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLG-FKTACIDEWK 423 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~ 423 (866)
+|+|||||+||+++|..|++.| .+|+|+||.+
T Consensus 2 ~V~IiGgGiaGla~A~~L~~~g~~~v~v~Er~~ 34 (414)
T TIGR03219 2 RVAIIGGGIAGVALALNLCKHSHLNVQLFEAAP 34 (414)
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 6999999999999999999998 5999999973
No 316
>PRK13339 malate:quinone oxidoreductase; Reviewed
Probab=97.76 E-value=0.00052 Score=78.67 Aligned_cols=60 Identities=12% Similarity=0.165 Sum_probs=42.3
Q ss_pred HHHHHHHHHHH-HcCCEEEeCceEEEEEEc-CCeEEEEEee-CCCCccceeEEEeccEEEEeecccc
Q psy9583 612 EIAKKAFHLLN-KQGLNIILNTKIHDIKIN-KENVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 612 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~-~~~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
.+.+.+.+.+. ..|+++++++.|+.++.. ++.+.+.+.. .++. ..++.+|.||+|.|...
T Consensus 185 ~L~~aL~~~l~~~~Gv~i~~~~~V~~I~~~~d~~w~v~v~~t~~g~----~~~i~Ad~VV~AAGawS 247 (497)
T PRK13339 185 ALTRKLAKHLESHPNAQVKYNHEVVDLERLSDGGWEVTVKDRNTGE----KREQVADYVFIGAGGGA 247 (497)
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEECCCCCEEEEEEecCCCc----eEEEEcCEEEECCCcch
Confidence 44566666665 459999999999999876 5566665431 2221 12589999999999765
No 317
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=97.74 E-value=0.00015 Score=84.01 Aligned_cols=101 Identities=15% Similarity=0.308 Sum_probs=66.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||++|+.+|..|++.|.+|+||++.+ .+. |. .
T Consensus 181 ~~vvIIGgG~~G~E~A~~l~~~g~~Vtli~~~~------~il---------~~--------------------------~ 219 (472)
T PRK05976 181 KSLVIVGGGVIGLEWASMLADFGVEVTVVEAAD------RIL---------PT--------------------------E 219 (472)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCeEEEEEecC------ccC---------Cc--------------------------C
Confidence 579999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~ 546 (866)
..++ ...+...+++.||+++.++.+..-..........+...++ .++.+|.||+|+|..|..
T Consensus 220 ~~~~--------------~~~l~~~l~~~gI~i~~~~~v~~i~~~~~~~~~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 283 (472)
T PRK05976 220 DAEL--------------SKEVARLLKKLGVRVVTGAKVLGLTLKKDGGVLIVAEHNGEEKTLEADKVLVSVGRRPNT 283 (472)
T ss_pred CHHH--------------HHHHHHHHHhcCCEEEeCcEEEEEEEecCCCEEEEEEeCCceEEEEeCEEEEeeCCccCC
Confidence 0000 1112345677899999987665211000112222222334 579999999999999874
No 318
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=97.73 E-value=0.00018 Score=82.33 Aligned_cols=104 Identities=19% Similarity=0.287 Sum_probs=72.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCC--C-cccHHH-------HHHH----HHHHHHcCCEEEeCceE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFL--N-TVDEEI-------AKKA----FHLLNKQGLNIILNTKI 634 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l--~-~~d~~~-------~~~l----~~~l~~~GV~i~~~~~v 634 (866)
++|+|||||+.|+.+|..|+++ +.+|+++++.+.+. + .++.-. ...+ ....++.|++++.+++|
T Consensus 2 ~~VVIIGgG~aG~~aA~~l~~~~~~~~I~li~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~V 81 (438)
T PRK13512 2 PKIIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYYIGEVVEDRKYALAYTPEKFYDRKQITVKTYHEV 81 (438)
T ss_pred CeEEEECCcHHHHHHHHHHHhhCCCCCEEEEECCCCcccccCCcchhhcCccCCHHHcccCCHHHHHHhCCCEEEeCCEE
Confidence 4799999999999999999887 57899999987532 1 111110 0111 22335679999999999
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
++|..++..+.+.-.. ++. ..++.+|.+|+|||.+|+...
T Consensus 82 ~~Id~~~~~v~~~~~~-~~~----~~~~~yd~lviAtGs~~~~~~ 121 (438)
T PRK13512 82 IAINDERQTVTVLNRK-TNE----QFEESYDKLILSPGASANSLG 121 (438)
T ss_pred EEEECCCCEEEEEECC-CCc----EEeeecCEEEECCCCCCCCCC
Confidence 9998777655443221 122 235789999999999997544
No 319
>PRK07236 hypothetical protein; Provisional
Probab=97.73 E-value=0.0002 Score=80.59 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=74.2
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------ccHHHHHHHHH------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------VDEEIAKKAFH------------------------ 619 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------~d~~~~~~l~~------------------------ 619 (866)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... +.+...+.+.+
T Consensus 6 ~~~ViIVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~g~gi~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~g~ 85 (386)
T PRK07236 6 GPRAVVIGGSLGGLFAALLLRRAGWDVDVFERSPTELDGRGAGIVLQPELLRALAEAGVALPADIGVPSRERIYLDRDGR 85 (386)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCcCCCCceeEeCHHHHHHHHHcCCCcccccccCccceEEEeCCCC
Confidence 578999999999999999999999999999998754321 23332222221
Q ss_pred -------------------HHHH--cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 620 -------------------LLNK--QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 620 -------------------~l~~--~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
.|.+ .++.+++++++++++.+++++.+.+. +|. ++.+|.||.|-|.....
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g~------~~~ad~vIgADG~~S~v 156 (386)
T PRK07236 86 VVQRRPMPQTQTSWNVLYRALRAAFPAERYHLGETLVGFEQDGDRVTARFA--DGR------RETADLLVGADGGRSTV 156 (386)
T ss_pred EeeccCCCccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCeEEEEEC--CCC------EEEeCEEEECCCCCchH
Confidence 1111 13568899999999988777777775 665 78999999999976654
No 320
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.73 E-value=2.9e-05 Score=89.77 Aligned_cols=56 Identities=13% Similarity=0.102 Sum_probs=44.4
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
-..+.+.+.+.+++.|++|+++++|++|..+++. +.+... +|. .+++|.||.+...
T Consensus 223 ~~al~~aL~~~~~~~Gg~I~~~~~V~~I~v~~g~g~~~~~~--~g~------~~~ad~vv~~~~~ 279 (487)
T COG1233 223 MGALVDALAELAREHGGEIRTGAEVSQILVEGGKGVGVRTS--DGE------NIEADAVVSNADP 279 (487)
T ss_pred HHHHHHHHHHHHHHcCCEEECCCceEEEEEeCCcceEEecc--ccc------eeccceeEecCch
Confidence 3567889999999999999999999999987764 333332 443 7899999998876
No 321
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=97.72 E-value=0.00018 Score=81.16 Aligned_cols=98 Identities=13% Similarity=0.247 Sum_probs=71.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcCC---CcccHHHH---------HHHHHHHHHcCCEEEeCceEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNFL---NTVDEEIA---------KKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~l---~~~d~~~~---------~~l~~~l~~~GV~i~~~~~v~ 635 (866)
.++++|||||+.|+.+|..|++.|. +|+++.+.+.+. +.+...+. ..-.+.+.+.||+++.++.|.
T Consensus 3 ~~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li~~e~~~~y~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~V~ 82 (396)
T PRK09754 3 EKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQQVLPANWWQENNVHLHSGVTIK 82 (396)
T ss_pred cCcEEEECChHHHHHHHHHHHhhCCCCCEEEeCCCCCCCCCCCCCCHHHHCCCCccccccCCHHHHHHCCCEEEcCCEEE
Confidence 4689999999999999999999876 799998765431 12222110 011345677899999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
.+..+... +.+. +|. .+.+|.+|+|||.+|..
T Consensus 83 ~id~~~~~--v~~~--~g~------~~~yd~LViATGs~~~~ 114 (396)
T PRK09754 83 TLGRDTRE--LVLT--NGE------SWHWDQLFIATGAAARP 114 (396)
T ss_pred EEECCCCE--EEEC--CCC------EEEcCEEEEccCCCCCC
Confidence 98765433 3333 555 79999999999999864
No 322
>KOG0368|consensus
Probab=97.72 E-value=4.5e-05 Score=91.35 Aligned_cols=65 Identities=28% Similarity=0.434 Sum_probs=61.6
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
.-|++++|+|+.|+.|..||+-+|||.|||.+.+.|+.+|+| +...++|+.+.+|++||.++-+.
T Consensus 692 s~GKLl~ylVedG~hv~~Gq~YAeiEvMKMvm~lva~~~G~i-~~i~~~G~~i~aG~vlakL~lDd 756 (2196)
T KOG0368|consen 692 SPGKLLQYLVEDGEHVEAGQPYAEIEVMKMVMPLVAKEPGRI-QLIKQEGDAIEAGSVLAKLTLDD 756 (2196)
T ss_pred CCccceEEEecCCCceecCCeeeehehhheeeeeeccCCceE-EEecCCCCccCccceeEEeecCC
Confidence 569999999999999999999999999999999999999999 58899999999999999998665
No 323
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=97.71 E-value=0.00035 Score=75.26 Aligned_cols=97 Identities=19% Similarity=0.221 Sum_probs=76.4
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC--------------------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-------------------------------------------- 607 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-------------------------------------------- 607 (866)
.|+|||||+.|+-+|..|++.|.+|+++++.+....
T Consensus 2 dv~IiGaG~aGl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T TIGR02032 2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRVLEELDLPLELIVNLVRGARFFSPNGDSVEIPIE 81 (295)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCcccccCccCHhHHHHhcCCchhhhhheeeEEEEcCCCcEEEeccC
Confidence 489999999999999999999999999998754210
Q ss_pred -----cc-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 608 -----TV-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 608 -----~~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
.+ ...+.+.+.+.+++.|++++.+++++++..+++.+.+.++. ++ .++.+|.||.|+|...
T Consensus 82 ~~~~~~i~r~~l~~~l~~~~~~~gv~~~~~~~v~~~~~~~~~~~~~~~~-~~------~~~~a~~vv~a~G~~s 148 (295)
T TIGR02032 82 TELAYVIDRDAFDEQLAERAQEAGAELRLGTTVLDVEIHDDRVVVIVRG-GE------GTVTAKIVIGADGSRS 148 (295)
T ss_pred CCcEEEEEHHHHHHHHHHHHHHcCCEEEeCcEEeeEEEeCCEEEEEEcC-cc------EEEEeCEEEECCCcch
Confidence 01 13455667777888899999999999998877776666542 22 3789999999999764
No 324
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=97.70 E-value=0.00013 Score=81.12 Aligned_cols=104 Identities=24% Similarity=0.274 Sum_probs=71.8
Q ss_pred cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc---------ccHHHHHHHHHHHHHcCCEEEeCceEEEEE
Q psy9583 568 NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT---------VDEEIAKKAFHLLNKQGLNIILNTKIHDIK 638 (866)
Q Consensus 568 ~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~---------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 638 (866)
..+++++|||+|+.|+++|..|++.|.+|+++++.+.+... ++.+......+.+.+.|++++.++.+..+.
T Consensus 16 ~~~~~VvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~v~~~~ 95 (352)
T PRK12770 16 PTGKKVAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFGIPEFRIPIERVREGVKELEEAGVVFHTRTKVCCGE 95 (352)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeeecCcccccCHHHHHHHHHHHHhCCeEEecCcEEeecc
Confidence 45789999999999999999999999999999998776421 233444455566777899999998886553
Q ss_pred E----cCCeEEEEEeeCCCCccceeEEEeccEEEEeecc-ccCC
Q psy9583 639 I----NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR-IPNT 677 (866)
Q Consensus 639 ~----~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~-~p~~ 677 (866)
. ..+....... .. +...+.+|.+|+|+|. .|..
T Consensus 96 ~~~~~~~~~~~~~~~--~~----~~~~~~~d~lviAtGs~~~~~ 133 (352)
T PRK12770 96 PLHEEEGDEFVERIV--SL----EELVKKYDAVLIATGTWKSRK 133 (352)
T ss_pred ccccccccccccccC--CH----HHHHhhCCEEEEEeCCCCCCc
Confidence 2 1111111110 10 0114689999999998 4543
No 325
>PRK07208 hypothetical protein; Provisional
Probab=97.70 E-value=3.1e-05 Score=89.96 Aligned_cols=44 Identities=30% Similarity=0.572 Sum_probs=39.8
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
|++++||+|||||++||+||..|++.|++|+|+|+. +.+||.|.
T Consensus 1 ~~~~~~vvIiGaGisGL~aA~~L~~~g~~v~v~E~~------~~~GG~~~ 44 (479)
T PRK07208 1 MTNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEAD------PVVGGISR 44 (479)
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHHCCCcEEEEecC------CCCCceee
Confidence 445689999999999999999999999999999998 78899774
No 326
>PRK00624 glycine cleavage system protein H; Provisional
Probab=97.69 E-value=7.8e-05 Score=66.77 Aligned_cols=43 Identities=19% Similarity=0.306 Sum_probs=37.5
Q ss_pred EEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEee
Q psy9583 19 TLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIII 62 (866)
Q Consensus 19 ~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~ 62 (866)
.-++|. ++|+.|++||++++||++|+..+|.||.+|+|.++.-
T Consensus 35 ~~v~lp-~~G~~V~~g~~i~~IEs~K~~~~i~sPvsG~Vv~vN~ 77 (114)
T PRK00624 35 LHIDLP-SVGSFCKEGEVLVILESSKSAIEVLSPVSGEVIEVNT 77 (114)
T ss_pred EEEECC-CCCCEEeCCCEEEEEEeccEEEEEeCCCCEEEEEEHH
Confidence 344553 6799999999999999999999999999999998853
No 327
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=97.69 E-value=0.00017 Score=80.91 Aligned_cols=99 Identities=17% Similarity=0.223 Sum_probs=68.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+++++.+ .+... ..|
T Consensus 141 ~~~vvViGgG~~g~e~A~~L~~~g~~Vtlv~~~~------~~l~~-----~~~--------------------------- 182 (377)
T PRK04965 141 AQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAA------SLLAS-----LMP--------------------------- 182 (377)
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC------cccch-----hCC---------------------------
Confidence 3679999999999999999999999999999862 11100 000
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
. .....+...+++.||+++.+..+. +.. ....+.+...++.++.+|.||+|+|..|.
T Consensus 183 --~--------------~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~g~~i~~D~vI~a~G~~p~ 240 (377)
T PRK04965 183 --P--------------EVSSRLQHRLTEMGVHLLLKSQLQGLEK---TDSGIRATLDSGRSIEVDAVIAAAGLRPN 240 (377)
T ss_pred --H--------------HHHHHHHHHHHhCCCEEEECCeEEEEEc---cCCEEEEEEcCCcEEECCEEEECcCCCcc
Confidence 0 001113345677899999876655 322 22344555567788999999999999886
No 328
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=97.68 E-value=0.00053 Score=79.62 Aligned_cols=138 Identities=22% Similarity=0.269 Sum_probs=88.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------------------------------c---------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-------------------------------V--------- 609 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-------------------------------~--------- 609 (866)
.|+|+|||+|.+|+-.+..|.+.|.+++++++.+.+... +
T Consensus 1 ~krVaVIGaG~sGL~a~k~l~e~g~~~~~fE~~~~iGG~W~~~~~~~~g~~~~y~sl~~n~sk~~~~fsdfp~p~~~p~f 80 (531)
T PF00743_consen 1 AKRVAVIGAGPSGLAAAKNLLEEGLEVTCFEKSDDIGGLWRYTENPEDGRSSVYDSLHTNTSKEMMAFSDFPFPEDYPDF 80 (531)
T ss_dssp --EEEEE--SHHHHHHHHHHHHTT-EEEEEESSSSSSGGGCHSTTCCCSEGGGSTT-B-SS-GGGSCCTTS-HCCCCSSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCeEEecCCCCCccCeeCCcCCCCccccccceEEeeCchHhcCCCcCCCCCCCCC
Confidence 379999999999999999999999999999987654211 0
Q ss_pred --cHHHHHHHHHHHHHcCC--EEEeCceEEEEEEcC-----CeEEEEEeeCCCCccceeEEEeccEEEEeecc--ccCCC
Q psy9583 610 --DEEIAKKAFHLLNKQGL--NIILNTKIHDIKINK-----ENVLINYSNKSTNVKTEIITSIFDKLLIAIGR--IPNTN 678 (866)
Q Consensus 610 --d~~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~-----~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~--~p~~~ 678 (866)
..++.++++...+..++ .+.++++|++++..+ +.+.++.. .+|. ..+..+|.|++|+|. .|+.+
T Consensus 81 ~~~~~v~~Yl~~Ya~~f~L~~~I~fnt~V~~v~~~~d~~~~~~W~V~~~-~~g~----~~~~~fD~VvvatG~~~~P~~P 155 (531)
T PF00743_consen 81 PSHSEVLEYLESYAEHFGLRKHIRFNTEVVSVERDPDFSATGKWEVTTE-NDGK----EETEEFDAVVVATGHFSKPNIP 155 (531)
T ss_dssp EBHHHHHHHHHHHHHHTTGGGGEETSEEEEEEEEETTTT-ETEEEEEET-TTTE----EEEEEECEEEEEE-SSSCESB-
T ss_pred CCHHHHHHHHHHHHhhhCCcceEEEccEEeEeeeccccCCCceEEEEee-cCCe----EEEEEeCeEEEcCCCcCCCCCC
Confidence 15678888888887776 588999999998754 24666654 2343 346679999999996 35543
Q ss_pred CCCccccCeeecCCCcEEeCCCCCC----CCCCEEEecccC
Q psy9583 679 NLNIDKIGLKVNENNFIIVNDNCET----NIPNIYAIGDVV 715 (866)
Q Consensus 679 ~l~l~~~gl~~~~~G~i~Vd~~l~T----s~~~VyA~GD~a 715 (866)
.. .-.|++.= .|.+.-...++. ..++|-.+|-..
T Consensus 156 ~~--~~~G~e~F-~G~i~HS~~yr~~~~f~gKrVlVVG~g~ 193 (531)
T PF00743_consen 156 EP--SFPGLEKF-KGEIIHSKDYRDPEPFKGKRVLVVGGGN 193 (531)
T ss_dssp ------CTGGGH-CSEEEEGGG--TGGGGTTSEEEEESSSH
T ss_pred hh--hhhhhhcC-CeeEEccccCcChhhcCCCEEEEEeCCH
Confidence 20 01123211 455554444432 357788888654
No 329
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=97.68 E-value=0.00021 Score=81.67 Aligned_cols=96 Identities=19% Similarity=0.194 Sum_probs=65.6
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+|+|||||++|+.+|..|++.|.+|+++++.+ .+.. +
T Consensus 138 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~------~~~~--------~---------------------------- 175 (427)
T TIGR03385 138 ENVVIIGGGYIGIEMAEALRERGKNVTLIHRSE------RILN--------K---------------------------- 175 (427)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCcEEEEECCc------ccCc--------c----------------------------
Confidence 689999999999999999999999999999862 1100 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
..+ . .+...+...+++.||+++.+..+. ++. ... + +...++.++.+|.||+|+|..|.
T Consensus 176 ~~~-~-----------~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~~~-~-v~~~~g~~i~~D~vi~a~G~~p~ 234 (427)
T TIGR03385 176 LFD-E-----------EMNQIVEEELKKHEINLRLNEEVDSIEG---EER-V-KVFTSGGVYQADMVILATGIKPN 234 (427)
T ss_pred ccC-H-----------HHHHHHHHHHHHcCCEEEeCCEEEEEec---CCC-E-EEEcCCCEEEeCEEEECCCccCC
Confidence 000 0 001113345677899999877665 322 222 2 22245678999999999999876
No 330
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ. CobZ is essential for cobalamin biosynthesis (by knockout of the R. capsulatus gene ) and is complemented by the characterized precorrin 3B synthase CobG. The enzyme has been shown to contain flavin, heme and Fe-S cluster cofactors and is believed to require dioxygen as a substrate. This model identifies the N-terminal portion of the R. capsulatus gene which, in other species exists as a separate protein. The C-terminal portion is homologous to the 2-component signal transduction system protein CitB (TIGR02484).
Probab=97.67 E-value=0.00015 Score=82.86 Aligned_cols=29 Identities=28% Similarity=0.407 Sum_probs=27.7
Q ss_pred eecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 395 VIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 395 IIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|||+|.||++||.++++.|.+|+|+||.+
T Consensus 1 VVG~G~AGl~AA~~Aa~~Ga~V~vlEK~~ 29 (432)
T TIGR02485 1 VIGGGLAGLCAAIEARRAGASVLLLEAAP 29 (432)
T ss_pred CCcccHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 79999999999999999999999999973
No 331
>COG1231 Monoamine oxidase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.00031 Score=76.82 Aligned_cols=41 Identities=29% Similarity=0.548 Sum_probs=38.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
..||+|||+|.+||.||..|.+.|++|+|+|.+ +.+||.|.
T Consensus 7 ~~~viivGaGlaGL~AA~eL~kaG~~v~ilEar------~r~GGR~~ 47 (450)
T COG1231 7 TADVIIVGAGLAGLSAAYELKKAGYQVQILEAR------DRVGGRSL 47 (450)
T ss_pred CCcEEEECCchHHHHHHHHHhhcCcEEEEEecc------CCcCceeE
Confidence 589999999999999999999999999999987 78888773
No 332
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.66 E-value=0.00027 Score=81.67 Aligned_cols=98 Identities=18% Similarity=0.280 Sum_probs=66.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+|+++.+ .+ .|.
T Consensus 173 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~------~~---------l~~--------------------------- 210 (466)
T PRK07818 173 KSIVIAGAGAIGMEFAYVLKNYGVDVTIVEFLD------RA---------LPN--------------------------- 210 (466)
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecCC------Cc---------CCc---------------------------
Confidence 579999999999999999999999999999862 11 000
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEE--EEEcCCc--eEEEecEEEEecCCCCc
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEI--QIINKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v--~v~~~~g--~~i~~d~lViATGs~p~ 545 (866)
.+. .+...+...+++.||+++.++.+. +.. ....+ .+...++ .++.+|.||+|+|..|.
T Consensus 211 -~d~------------~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~~~g~~~~i~~D~vi~a~G~~pn 274 (466)
T PRK07818 211 -EDA------------EVSKEIAKQYKKLGVKILTGTKVESIDD---NGSKVTVTVSKKDGKAQELEADKVLQAIGFAPR 274 (466)
T ss_pred -cCH------------HHHHHHHHHHHHCCCEEEECCEEEEEEE---eCCeEEEEEEecCCCeEEEEeCEEEECcCcccC
Confidence 000 001113445778899999987665 322 12223 3321234 57999999999999887
Q ss_pred C
Q psy9583 546 S 546 (866)
Q Consensus 546 ~ 546 (866)
.
T Consensus 275 ~ 275 (466)
T PRK07818 275 V 275 (466)
T ss_pred C
Confidence 4
No 333
>PRK06475 salicylate hydroxylase; Provisional
Probab=97.64 E-value=0.00019 Score=81.23 Aligned_cols=33 Identities=27% Similarity=0.449 Sum_probs=31.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+|+|||||+||+++|..|++.|++|+|+|+.+
T Consensus 3 ~~V~IvGgGiaGl~~A~~L~~~G~~V~i~E~~~ 35 (400)
T PRK06475 3 GSPLIAGAGVAGLSAALELAARGWAVTIIEKAQ 35 (400)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 679999999999999999999999999999973
No 334
>KOG0238|consensus
Probab=97.64 E-value=4.1e-05 Score=82.87 Aligned_cols=61 Identities=21% Similarity=0.325 Sum_probs=58.9
Q ss_pred EEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 18 ATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 18 g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
|.|.+.+||+||.|++||.++.++.||+...+.||.+|++..+.+++|++|.-|.+|..++
T Consensus 610 G~Iekv~Vkpgd~V~~Gq~l~Vl~AMKMe~~~~apk~gtvk~v~~~aG~~v~~g~vlv~~~ 670 (670)
T KOG0238|consen 610 GIIEKVLVKPGDKVKEGQELVVLIAMKMEHSLKAPKDGTVKDVKYKAGATVGDGAVLVEFE 670 (670)
T ss_pred CeeeeeeccchhhhcccCceEEEEecchhhhhhCCCCCceeeEeeecCcccCCCceEEEeC
Confidence 7899999999999999999999999999999999999999999999999999999998864
No 335
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.63 E-value=0.00021 Score=82.60 Aligned_cols=98 Identities=20% Similarity=0.272 Sum_probs=67.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 173 ~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~------~~l---------~~---------------------~----- 211 (462)
T PRK06416 173 KSLVVIGGGYIGVEFASAYASLGAEVTIVEALP------RIL---------PG---------------------E----- 211 (462)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC------CcC---------Cc---------------------C-----
Confidence 579999999999999999999999999999862 210 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc---eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK---ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g---~~i~~d~lViATGs~p~~ 546 (866)
..+. ...+...+++.||+++.+..+. +.. ..+.+.+...++ +++.+|.||+|+|..|..
T Consensus 212 ~~~~--------------~~~l~~~l~~~gV~i~~~~~V~~i~~---~~~~v~v~~~~gg~~~~i~~D~vi~a~G~~p~~ 274 (462)
T PRK06416 212 DKEI--------------SKLAERALKKRGIKIKTGAKAKKVEQ---TDDGVTVTLEDGGKEETLEADYVLVAVGRRPNT 274 (462)
T ss_pred CHHH--------------HHHHHHHHHHcCCEEEeCCEEEEEEE---eCCEEEEEEEeCCeeEEEEeCEEEEeeCCccCC
Confidence 0000 0112345677899999987665 322 223454543333 679999999999999874
No 336
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=97.63 E-value=0.00031 Score=80.95 Aligned_cols=98 Identities=16% Similarity=0.259 Sum_probs=66.8
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||++|+.+|..+++.|.+|+++++.+ .+. |. .
T Consensus 171 ~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~------~ll---------~~--------------------------~ 209 (458)
T PRK06912 171 SSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAP------QLL---------PG--------------------------E 209 (458)
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEecCC------CcC---------cc--------------------------c
Confidence 579999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.++.+. ++. ....+.+..+++ .++.+|.||+|+|..|..
T Consensus 210 d~e--------------~~~~l~~~L~~~GI~i~~~~~V~~i~~---~~~~v~~~~~g~~~~i~~D~vivA~G~~p~~ 270 (458)
T PRK06912 210 DED--------------IAHILREKLENDGVKIFTGAALKGLNS---YKKQALFEYEGSIQEVNAEFVLVSVGRKPRV 270 (458)
T ss_pred cHH--------------HHHHHHHHHHHCCCEEEECCEEEEEEE---cCCEEEEEECCceEEEEeCEEEEecCCccCC
Confidence 000 01112345677899999987655 322 223445543322 479999999999998874
No 337
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase. The gene is known as glf, ceoA, and rfbD. It is known experimentally in E. coli, Mycobacterium tuberculosis, and Klebsiella pneumoniae.
Probab=97.62 E-value=5.6e-05 Score=83.48 Aligned_cols=42 Identities=36% Similarity=0.620 Sum_probs=38.5
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcccee
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNV 438 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~ 438 (866)
+||+|||||++|+++|.+|++.|.+|+|+|++ +.+||.|...
T Consensus 2 ~DvvIIGaG~aGlsaA~~La~~G~~V~viEk~------~~iGG~~~~~ 43 (377)
T TIGR00031 2 FDYIIVGAGLSGIVLANILAQLNKRVLVVEKR------NHIGGNCYDE 43 (377)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecC------CCCCCceeee
Confidence 79999999999999999999999999999997 7899987543
No 338
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit.
Probab=97.62 E-value=0.00022 Score=87.33 Aligned_cols=100 Identities=18% Similarity=0.223 Sum_probs=68.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+|+++.+ .+- + . .+
T Consensus 140 ~k~vvVVGgG~~GlE~A~~L~~~G~~Vtvv~~~~------~ll---------~-----~---------------~l---- 180 (785)
T TIGR02374 140 FKKAAVIGGGLLGLEAAVGLQNLGMDVSVIHHAP------GLM---------A-----K---------------QL---- 180 (785)
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEccCC------chh---------h-----h---------------hc----
Confidence 3679999999999999999999999999999751 110 0 0 00
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
+. .....+...+++.||+++.+..+. +.. ......+...+|.++.+|.||+|+|.+|..
T Consensus 181 ---d~------------~~~~~l~~~l~~~GV~v~~~~~v~~i~~---~~~~~~v~~~dG~~i~~D~Vi~a~G~~Pn~ 240 (785)
T TIGR02374 181 ---DQ------------TAGRLLQRELEQKGLTFLLEKDTVEIVG---ATKADRIRFKDGSSLEADLIVMAAGIRPND 240 (785)
T ss_pred ---CH------------HHHHHHHHHHHHcCCEEEeCCceEEEEc---CCceEEEEECCCCEEEcCEEEECCCCCcCc
Confidence 00 001123445778899999987654 211 112333444567889999999999999874
No 339
>PRK13380 glycine cleavage system protein H; Provisional
Probab=97.61 E-value=9.3e-05 Score=69.48 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=43.9
Q ss_pred EEEEEEEeC-CCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC
Q psy9583 18 ATLLNWHKK-EGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS 66 (866)
Q Consensus 18 g~i~~w~~~-~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~ 66 (866)
|+|+.+.+. +|++|++||+++.||++|+..+|.||.+|+|.++..+.-+
T Consensus 44 G~I~~v~lp~~G~~V~~Gd~~~~IEs~K~~~~v~sPvsG~Vv~vN~~l~~ 93 (144)
T PRK13380 44 GDVVFVRLKELGKKVEKGKPVATLESGKWAGPVPAPLTGEVVEVNEALED 93 (144)
T ss_pred CCEEEEEcCCCCCEeeCCCeEEEEEEcceEeeeecCcCEEEEEEHHhhhh
Confidence 678888776 8999999999999999999999999999999998866544
No 340
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=97.60 E-value=0.00082 Score=74.40 Aligned_cols=102 Identities=22% Similarity=0.282 Sum_probs=76.9
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------------------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------- 608 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------- 608 (866)
+|+|||||+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G~~v~i~E~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAGIDVTIIERRPDPRPKGRGIGLSPNSLRILQRLGLLDEILARGSPHEVMRIFFYDGISD 82 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTCEEEEEESSSSCCCSSSSEEEEHHHHHHHHHTTEHHHHHHHSEEECEEEEEEEEETTT
T ss_pred eEEEECCCHHHHHHHHHHHhcccccccchhcccccccccccccccccccccccccchhhhhhhcccccceeeEeecccCC
Confidence 5899999999999999999999999999886532110
Q ss_pred -------------------------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeC-CCCccceeEE
Q psy9583 609 -------------------------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNK-STNVKTEIIT 661 (866)
Q Consensus 609 -------------------------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~~ 661 (866)
+ -..+.+.+.+.+++.|++++++++++.++.+.+++.+.+... +|. ..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~~~~d~~~~~~~~~~~~~g~----~~~ 158 (356)
T PF01494_consen 83 SRIWVENPQIREDMEIDTKGPYGHVIDRPELDRALREEAEERGVDIRFGTRVVSIEQDDDGVTVVVRDGEDGE----EET 158 (356)
T ss_dssp SEEEEEEEEEEEECHSTSGSSCEEEEEHHHHHHHHHHHHHHHTEEEEESEEEEEEEEETTEEEEEEEETCTCE----EEE
T ss_pred ccceeeecccceeeeccccCCcchhhhHHHHHHhhhhhhhhhhhhheeeeecccccccccccccccccccCCc----eeE
Confidence 0 134566777778888999999999999998888877766643 333 357
Q ss_pred EeccEEEEeeccccCC
Q psy9583 662 SIFDKLLIAIGRIPNT 677 (866)
Q Consensus 662 ~~~D~vi~a~G~~p~~ 677 (866)
+++|+||-|-|.....
T Consensus 159 i~adlvVgADG~~S~v 174 (356)
T PF01494_consen 159 IEADLVVGADGAHSKV 174 (356)
T ss_dssp EEESEEEE-SGTT-HH
T ss_pred EEEeeeecccCcccch
Confidence 9999999999987644
No 341
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=97.60 E-value=0.0002 Score=72.50 Aligned_cols=103 Identities=30% Similarity=0.409 Sum_probs=73.2
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---Cccc-----------HHHH--H--HHHHHHHHcCCEEEeCce
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---NTVD-----------EEIA--K--KAFHLLNKQGLNIILNTK 633 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---~~~d-----------~~~~--~--~l~~~l~~~GV~i~~~~~ 633 (866)
+|+|||||+.|+.+|..|.+.+.+++++++.+... ..+. .... . .+.+.+...+++++.++.
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 80 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPGAKVLIIEKSPGTPYNSGCIPSPLLVEIAPHRHEFLPARLFKLVDQLKNRGVEIRLNAK 80 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEESSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGHHHHHHHHHTHEEEHHHT
T ss_pred CEEEEecHHHHHHHHHHHhcCCCeEEEEecccccccccccccccccccccccccccccccccccccccccceEEEeeccc
Confidence 58999999999999999999999999997765321 1100 0111 1 444556788999999999
Q ss_pred EEEEEEcCCeE-----EEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 634 IHDIKINKENV-----LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 634 v~~i~~~~~~~-----~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+.++......+ .+.... .+. ..++.+|.+|+|+|..|+...
T Consensus 81 v~~i~~~~~~~~~~~~~~~~~~-~~~----~~~~~~d~lviAtG~~~~~~~ 126 (201)
T PF07992_consen 81 VVSIDPESKRVVCPAVTIQVVE-TGD----GREIKYDYLVIATGSRPRTPN 126 (201)
T ss_dssp EEEEEESTTEEEETCEEEEEEE-TTT----EEEEEEEEEEEESTEEEEEES
T ss_pred cccccccccccccCcccceeec-cCC----ceEecCCeeeecCccccceee
Confidence 99998876632 222211 111 358999999999999987654
No 342
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=97.58 E-value=0.00037 Score=79.35 Aligned_cols=109 Identities=20% Similarity=0.259 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--Ccc---------cHHHHHHHHHHHHHcCCEEEeCceEEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--NTV---------DEEIAKKAFHLLNKQGLNIILNTKIHDIK 638 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--~~~---------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 638 (866)
.++++|||||+.|+.+|..|.+.+.+|+++++.+.+. +.+ ..++...+.+.++..|++++. .+|++|+
T Consensus 10 ~~~vVIvGgG~aGl~~a~~L~~~~~~ItlI~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~-~~V~~Id 88 (424)
T PTZ00318 10 KPNVVVLGTGWAGAYFVRNLDPKKYNITVISPRNHMLFTPLLPQTTTGTLEFRSICEPVRPALAKLPNRYLR-AVVYDVD 88 (424)
T ss_pred CCeEEEECCCHHHHHHHHHhCcCCCeEEEEcCCCCcchhhhHHHhcccCCChHHhHHHHHHHhccCCeEEEE-EEEEEEE
Confidence 4789999999999999999977678999999887753 111 122334455667777888764 6899998
Q ss_pred EcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 639 INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 639 ~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.++..+.+.....+.....+..++.+|.+|+|+|.+|+...
T Consensus 89 ~~~~~v~~~~~~~~~~~~~~g~~i~yD~LViAtGs~~~~~~ 129 (424)
T PTZ00318 89 FEEKRVKCGVVSKSNNANVNTFSVPYDKLVVAHGARPNTFN 129 (424)
T ss_pred cCCCEEEEecccccccccCCceEecCCEEEECCCcccCCCC
Confidence 77766655322111000001237999999999999987544
No 343
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein. This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Probab=97.58 E-value=0.00054 Score=79.18 Aligned_cols=97 Identities=13% Similarity=0.122 Sum_probs=64.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.. .+ |. +
T Consensus 181 ~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~~------~l----------~~---------------------~----- 218 (484)
T TIGR01438 181 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI------LL----------RG---------------------F----- 218 (484)
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCcEEEEEecc------cc----------cc---------------------c-----
Confidence 469999999999999999999999999998630 00 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc---eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK---ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g---~~i~~d~lViATGs~p~~ 546 (866)
+.++ ...+...+++.||+++.+..+. +... ...+.+...++ .++.+|.|++|+|..|..
T Consensus 219 d~~~--------------~~~l~~~L~~~gV~i~~~~~v~~v~~~---~~~~~v~~~~~~~~~~i~~D~vl~a~G~~pn~ 281 (484)
T TIGR01438 219 DQDC--------------ANKVGEHMEEHGVKFKRQFVPIKVEQI---EAKVKVTFTDSTNGIEEEYDTVLLAIGRDACT 281 (484)
T ss_pred CHHH--------------HHHHHHHHHHcCCEEEeCceEEEEEEc---CCeEEEEEecCCcceEEEeCEEEEEecCCcCC
Confidence 0000 1113345777899999887543 2211 12333332222 479999999999998874
No 344
>PTZ00367 squalene epoxidase; Provisional
Probab=97.57 E-value=0.00011 Score=85.86 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=32.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
..+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 32 ~~~dViIVGaGiaGlalA~aLar~G~~V~VlEr~~ 66 (567)
T PTZ00367 32 YDYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDL 66 (567)
T ss_pred cCccEEEECCCHHHHHHHHHHHhcCCEEEEEcccc
Confidence 35899999999999999999999999999999973
No 345
>PRK08244 hypothetical protein; Provisional
Probab=97.56 E-value=0.00078 Score=78.47 Aligned_cols=102 Identities=17% Similarity=0.150 Sum_probs=78.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 608 (866)
..|+|||||+.|+-+|..|++.|.+|+++++.+...+.
T Consensus 3 ~dVlIVGaGpaGl~lA~~L~~~G~~v~viEr~~~~~~~~ra~~l~~~~~e~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 82 (493)
T PRK08244 3 YEVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLERFLEKGRKLPSGHFAGLDTRL 82 (493)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCCcceeEecHHHHHHHHhcCcHHHHHhhcccccceEEecccccC
Confidence 36999999999999999999999999999876432100
Q ss_pred -c--------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 609 -V--------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 609 -~--------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
+ -..+.+.+.+.+++.|++++.++++++++.+++++.+.+...+|. .++.+|.||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~i~q~~le~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~-----~~i~a~~vVgADG~ 157 (493)
T PRK08244 83 DFSALDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGPDGL-----RTLTSSYVVGADGA 157 (493)
T ss_pred CcccCCCCCCcEEEecHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEcCCeEEEEEEeCCcc-----EEEEeCEEEECCCC
Confidence 0 012345555666778999999999999998888887777643442 37899999999998
Q ss_pred ccCC
Q psy9583 674 IPNT 677 (866)
Q Consensus 674 ~p~~ 677 (866)
+...
T Consensus 158 ~S~v 161 (493)
T PRK08244 158 GSIV 161 (493)
T ss_pred ChHH
Confidence 7643
No 346
>PRK10262 thioredoxin reductase; Provisional
Probab=97.55 E-value=0.001 Score=72.94 Aligned_cols=101 Identities=16% Similarity=0.209 Sum_probs=72.5
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC---cC--------CCc-----ccHHHHHHHHHHHHHcCCEEEeCc
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS---NF--------LNT-----VDEEIAKKAFHLLNKQGLNIILNT 632 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~---~~--------l~~-----~d~~~~~~l~~~l~~~GV~i~~~~ 632 (866)
..++++|||||+.|+.+|..+.++|.++++++... .+ ++. ..+++.+.+.+.....++++..+
T Consensus 5 ~~~~vvIIGgGpaGl~aA~~l~~~g~~~~~ie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (321)
T PRK10262 5 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFD- 83 (321)
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCeEEEEeecCCCceecCceECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEee-
Confidence 35789999999999999999999999999886432 11 011 12455777778888888888765
Q ss_pred eEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 633 KIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 633 ~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+..++..++.+.+.. +.. .+.+|.||+|+|..|+...
T Consensus 84 ~v~~v~~~~~~~~v~~---~~~------~~~~d~vilAtG~~~~~~~ 121 (321)
T PRK10262 84 HINKVDLQNRPFRLTG---DSG------EYTCDALIIATGASARYLG 121 (321)
T ss_pred EEEEEEecCCeEEEEe---cCC------EEEECEEEECCCCCCCCCC
Confidence 5667776655554432 122 6889999999999986543
No 347
>PRK08294 phenol 2-monooxygenase; Provisional
Probab=97.55 E-value=0.00064 Score=81.11 Aligned_cols=37 Identities=22% Similarity=0.546 Sum_probs=33.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHC-CCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~ 423 (866)
|...+||+||||||+||++|..|+++ |.+|+|||+.+
T Consensus 29 ~~~~~dVlIVGAGPaGL~lA~~Lar~~Gi~v~IiE~~~ 66 (634)
T PRK08294 29 LPDEVDVLIVGCGPAGLTLAAQLSAFPDITTRIVERKP 66 (634)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHhcCCCCcEEEEEcCC
Confidence 44579999999999999999999995 99999999974
No 348
>PRK07538 hypothetical protein; Provisional
Probab=97.55 E-value=0.00016 Score=82.29 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=31.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+||+|||||+||+++|..|++.|++|+|||+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 33 (413)
T PRK07538 1 MKVLIAGGGIGGLTLALTLHQRGIEVVVFEAAP 33 (413)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 479999999999999999999999999999973
No 349
>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.55 E-value=0.00038 Score=82.10 Aligned_cols=45 Identities=18% Similarity=0.181 Sum_probs=33.9
Q ss_pred CcEEeCCCCCC----------CCCCEEEecccCC-CC--------CcHHHHHHHHHHHHHHHhC
Q psy9583 693 NFIIVNDNCET----------NIPNIYAIGDVVR-GP--------MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 693 G~i~Vd~~l~T----------s~~~VyA~GD~a~-~~--------~~~~~A~~~g~~aa~~i~g 737 (866)
|+|.+|...+| ++||+||+|+|++ +. .....|+-.|++|++++..
T Consensus 340 GGi~vd~~g~~~~~d~~~~~t~IpGLYAaGE~a~~g~hGanrlggnsl~~a~v~Gr~Ag~~aa~ 403 (570)
T PRK05675 340 GGVATNIHGQAITQDANGNDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEK 403 (570)
T ss_pred CCcccCCCCeeecccccccCCccCCeeecccccccCCCCccccccccHHHHHHHHHHHHHHHHH
Confidence 66777777665 7999999999974 21 1246678889999998864
No 350
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=97.53 E-value=0.00032 Score=86.77 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=72.3
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .++.++.+...+.+++.||+|++++.+-.
T Consensus 305 ~gkkVaVIGsGPAGLsaA~~Lar~G~~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~--- 381 (944)
T PRK12779 305 VKPPIAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGK--- 381 (944)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEecc---
Confidence 379999999999999999999999999999999875432 24677778888889999999999876521
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc-cCC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI-PNT 677 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~-p~~ 677 (866)
.+++. +.. ...+|.|++|+|.. |..
T Consensus 382 -----dit~~--~l~------~~~yDAV~LAtGA~~pr~ 407 (944)
T PRK12779 382 -----TATLE--DLK------AAGFWKIFVGTGAGLPTF 407 (944)
T ss_pred -----EEeHH--Hhc------cccCCEEEEeCCCCCCCc
Confidence 13332 221 35689999999984 544
No 351
>PRK06834 hypothetical protein; Provisional
Probab=97.53 E-value=0.0011 Score=76.86 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=76.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---C---ccc----------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---N---TVD---------------------------------- 610 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---~---~~d---------------------------------- 610 (866)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... + .+.
T Consensus 4 ~dVlIVGaGp~Gl~lA~~La~~G~~v~vlEr~~~~~~~~~Ra~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~ 83 (488)
T PRK06834 4 HAVVIAGGGPTGLMLAGELALAGVDVAIVERRPNQELVGSRAGGLHARTLEVLDQRGIADRFLAQGQVAQVTGFAATRLD 83 (488)
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCCCcceeeECHHHHHHHHHcCcHHHHHhcCCccccceeeeEecc
Confidence 469999999999999999999999999999765311 0 000
Q ss_pred ----------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 611 ----------------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 611 ----------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
..+.+.+.+.+++.|+++++++++++++.+++++.+++. +|. ++.+|.||.|.|..
T Consensus 84 ~~~~~~~~~~~~~i~q~~le~~L~~~l~~~gv~i~~~~~v~~v~~~~~~v~v~~~--~g~------~i~a~~vVgADG~~ 155 (488)
T PRK06834 84 ISDFPTRHNYGLALWQNHIERILAEWVGELGVPIYRGREVTGFAQDDTGVDVELS--DGR------TLRAQYLVGCDGGR 155 (488)
T ss_pred cccCCCCCCccccccHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEcCCeEEEEEC--CCC------EEEeCEEEEecCCC
Confidence 122334445567779999999999999988888777663 454 78999999999998
Q ss_pred cCC
Q psy9583 675 PNT 677 (866)
Q Consensus 675 p~~ 677 (866)
+..
T Consensus 156 S~v 158 (488)
T PRK06834 156 SLV 158 (488)
T ss_pred CCc
Confidence 754
No 352
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
Probab=97.52 E-value=0.0012 Score=65.04 Aligned_cols=168 Identities=20% Similarity=0.241 Sum_probs=101.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------cc-------------------------------H
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-------VD-------------------------------E 611 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-------~d-------------------------------~ 611 (866)
...|+|||+|++|+-+|.+|++.|.+|.+++|+-.+... |+ .
T Consensus 30 esDViIVGaGPsGLtAAyyLAk~g~kV~i~E~~ls~GGG~w~GGmlf~~iVv~~~a~~iL~e~gI~ye~~e~g~~v~ds~ 109 (262)
T COG1635 30 ESDVIIVGAGPSGLTAAYYLAKAGLKVAIFERKLSFGGGIWGGGMLFNKIVVREEADEILDEFGIRYEEEEDGYYVADSA 109 (262)
T ss_pred hccEEEECcCcchHHHHHHHHhCCceEEEEEeecccCCcccccccccceeeecchHHHHHHHhCCcceecCCceEEecHH
Confidence 467999999999999999999999999999987654321 11 2
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEEEEEeeCC----CCccceeEEEeccEEEEeeccccCCCCCCccc--
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVLINYSNKS----TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK-- 684 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~----g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~-- 684 (866)
++...+....-+.|.+++....++.+.-.++ ++.-.+.+.. -...-+...++++.|+-|||.....-.+..+.
T Consensus 110 e~~skl~~~a~~aGaki~n~~~veDvi~r~~~rVaGvVvNWt~V~~~~lhvDPl~i~a~~VvDaTGHda~v~~~~~kr~~ 189 (262)
T COG1635 110 EFASKLAARALDAGAKIFNGVSVEDVIVRDDPRVAGVVVNWTPVQMAGLHVDPLTIRAKAVVDATGHDAEVVSFLAKRIP 189 (262)
T ss_pred HHHHHHHHHHHhcCceeeecceEEEEEEecCCceEEEEEecchhhhcccccCcceeeEEEEEeCCCCchHHHHHHHHhcc
Confidence 2233333333446788888889988766555 4432222211 11233456889999999999876543221111
Q ss_pred -cCeeecCCCcEEeC--CCC-----CCCCCCEEEecccCC----CCC--cHHHH-HHHHHHHHHHHhC
Q psy9583 685 -IGLKVNENNFIIVN--DNC-----ETNIPNIYAIGDVVR----GPM--LAHKA-EEEGIMVAEHISG 737 (866)
Q Consensus 685 -~gl~~~~~G~i~Vd--~~l-----~Ts~~~VyA~GD~a~----~~~--~~~~A-~~~g~~aa~~i~g 737 (866)
++.++...+..+.+ |.+ +--+||+|++|=.+. .|+ -...+ ..+|+.||+.++.
T Consensus 190 ~l~~~~~Ge~~mw~e~~E~lvV~~T~eV~pgL~vaGMa~~av~G~pRMGPiFGgMllSGkkaAe~i~e 257 (262)
T COG1635 190 ELGIEVPGEKSMWAERGEDLVVENTGEVYPGLYVAGMAVNAVHGLPRMGPIFGGMLLSGKKAAEEILE 257 (262)
T ss_pred ccccccCCCcchhhhHHHHHHHhccccccCCeEeehhhHHhhcCCcccCchhhhhhhchHHHHHHHHH
Confidence 12332222223332 221 224799999998764 221 23333 3568888877654
No 353
>KOG0399|consensus
Probab=97.51 E-value=0.0019 Score=76.44 Aligned_cols=185 Identities=18% Similarity=0.273 Sum_probs=115.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN 640 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 640 (866)
+++|+|||.|+.|+-+|..|.+.|..|++.+|.+++.. -+|.-+.++-...|.+.||+|.+|+.|-.
T Consensus 1785 g~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~ygipnmkldk~vv~rrv~ll~~egi~f~tn~eigk---- 1860 (2142)
T KOG0399|consen 1785 GKRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMYGIPNMKLDKFVVQRRVDLLEQEGIRFVTNTEIGK---- 1860 (2142)
T ss_pred CcEEEEEccCchhhhHHHHHhhcCcEEEEEEecCCcCceeeecCCccchhHHHHHHHHHHHHhhCceEEeeccccc----
Confidence 58999999999999999999999999999999998742 24777888888999999999999988732
Q ss_pred CCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccc---cCeee-----cCCCcEEeCCCC-----CCCCCC
Q psy9583 641 KENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK---IGLKV-----NENNFIIVNDNC-----ETNIPN 707 (866)
Q Consensus 641 ~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~---~gl~~-----~~~G~i~Vd~~l-----~Ts~~~ 707 (866)
. +.+ |+ ..-+.|.|++|+|..-..++- .+. .|+.+ ..+-.-..|..+ ...-+.
T Consensus 1861 --~--vs~---d~------l~~~~daiv~a~gst~prdlp-v~grd~kgv~fame~l~~ntk~lld~~~d~~~~~~~gkk 1926 (2142)
T KOG0399|consen 1861 --H--VSL---DE------LKKENDAIVLATGSTTPRDLP-VPGRDLKGVHFAMEFLEKNTKSLLDSVLDGNYISAKGKK 1926 (2142)
T ss_pred --c--ccH---HH------HhhccCeEEEEeCCCCCcCCC-CCCccccccHHHHHHHHHhHHhhhccccccceeccCCCe
Confidence 1 222 11 134569999999975433321 111 11110 000011122222 223355
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCCccEEEEccCceeeeecCHHHHHhc-CCcE
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHI--SGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKH-NISY 774 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i--~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~~~ 774 (866)
|..+|---.+......++++|..-..|+ +-.+.+......||-. .|-+-.|-...+|+++. |-|.
T Consensus 1927 vivigggdtg~dcigtsvrhg~~sv~n~ellp~pp~~ra~~npwpq--wprvfrvdygh~e~~~~~g~dp 1994 (2142)
T KOG0399|consen 1927 VIVIGGGDTGTDCIGTSVRHGCKSVGNFELLPQPPPERAPDNPWPQ--WPRVFRVDYGHAEAKEHYGSDP 1994 (2142)
T ss_pred EEEECCCCccccccccchhhccceecceeecCCCCcccCCCCCCcc--CceEEEeecchHHHHHHhCCCc
Confidence 6777633333444556667775544443 3333222233345443 36677888899999876 5443
No 354
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=97.51 E-value=0.00048 Score=84.12 Aligned_cols=91 Identities=24% Similarity=0.390 Sum_probs=69.4
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .++.+....-.+.+++.||++++++.+ .+.
T Consensus 538 tgKkVaIIGgGPAGLsAA~~Lar~G~~VtV~Ek~~~~GG~lr~~IP~~Rlp~evL~~die~l~~~GVe~~~gt~V-di~- 615 (1019)
T PRK09853 538 SRKKVAVIGAGPAGLAAAYFLARAGHPVTVFEREENAGGVVKNIIPQFRIPAELIQHDIEFVKAHGVKFEFGCSP-DLT- 615 (1019)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCeEEEEecccccCcceeeecccccccHHHHHHHHHHHHHcCCEEEeCcee-EEE-
Confidence 468999999999999999999999999999998775422 134555666667888899999999876 221
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
+. +.. ...+|.||+|||..+..
T Consensus 616 --------le--~L~------~~gYDaVILATGA~~~~ 637 (1019)
T PRK09853 616 --------VE--QLK------NEGYDYVVVAIGADKNG 637 (1019)
T ss_pred --------hh--hhe------eccCCEEEECcCCCCCC
Confidence 11 111 44589999999997543
No 355
>KOG0029|consensus
Probab=97.51 E-value=8.1e-05 Score=85.15 Aligned_cols=40 Identities=35% Similarity=0.558 Sum_probs=36.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
.++|+|||||+|||+||++|.+.|++|+|+|.+ +++||..
T Consensus 15 ~~~VIVIGAGiaGLsAArqL~~~G~~V~VLEAR------dRvGGRI 54 (501)
T KOG0029|consen 15 KKKVIVIGAGLAGLSAARQLQDFGFDVLVLEAR------DRVGGRI 54 (501)
T ss_pred CCcEEEECCcHHHHHHHHHHHHcCCceEEEecc------CCcCcee
Confidence 589999999999999999999999999999997 7788764
No 356
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase. This model represents an orthologous set of proteins present in relatively few bacteria but very tightly conserved where it occurs. It is closely related to gidA (glucose-inhibited division protein A), which appears to be present in all complete eubacterial genomes so far and in Saccharomyces cerevisiae. It was designated gid but is now recognized as a tRNA:m(5)U-54 methyltransferase and is now designated trmFO.
Probab=97.50 E-value=0.00023 Score=79.30 Aligned_cols=31 Identities=35% Similarity=0.387 Sum_probs=30.0
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
||+|||||.+|+.||..|++.|++|+|||+.
T Consensus 2 ~VvVIGgGlAGleaA~~LAr~G~~V~LiE~r 32 (433)
T TIGR00137 2 PVHVIGGGLAGSEAAWQLAQAGVPVILYEMR 32 (433)
T ss_pred CEEEECCCHHHHHHHHHHHhCCCcEEEEecc
Confidence 7999999999999999999999999999986
No 357
>PRK05257 malate:quinone oxidoreductase; Validated
Probab=97.50 E-value=0.0013 Score=75.79 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=31.8
Q ss_pred cccceeeecCCccHHHHHHHHHHC--CCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~ 423 (866)
.++||+|||||+.|++.|++|++. |.+|+|+||..
T Consensus 4 ~~~DVvIIGgGIiG~slA~~L~~~~~g~~V~VlEk~~ 40 (494)
T PRK05257 4 SKTDVVLIGGGIMSATLGTLLKELEPEWSITMFERLD 40 (494)
T ss_pred ccceEEEECcHHHHHHHHHHHHHhCCCCeEEEEEcCC
Confidence 358999999999999999999985 78999999974
No 358
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria.
Probab=97.50 E-value=0.00047 Score=79.13 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=67.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..+++.|.+|+++++.+ .+. |. .
T Consensus 167 ~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~------~~l---------~~---------------------~----- 205 (446)
T TIGR01424 167 KSILILGGGYIAVEFAGIWRGLGVQVTLIYRGE------LIL---------RG---------------------F----- 205 (446)
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEeCC------CCC---------cc---------------------c-----
Confidence 579999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.+..+. +.. ....+.+...++.++.+|.||+|+|..|..
T Consensus 206 d~~--------------~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~g~~i~~D~viva~G~~pn~ 265 (446)
T TIGR01424 206 DDD--------------MRALLARNMEGRGIRIHPQTSLTSITK---TDDGLKVTLSHGEEIVADVVLFATGRSPNT 265 (446)
T ss_pred CHH--------------HHHHHHHHHHHCCCEEEeCCEEEEEEE---cCCeEEEEEcCCcEeecCEEEEeeCCCcCC
Confidence 000 01112345677899999887654 321 112344544456789999999999998874
No 359
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.49 E-value=0.00089 Score=77.34 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=30.6
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+++|||||+.|+.+|..+++.|.+|+||++.
T Consensus 175 ~~vvIiGgG~iG~E~A~~l~~~G~~Vtlv~~~ 206 (471)
T PRK06467 175 KRLLVMGGGIIGLEMGTVYHRLGSEVDVVEMF 206 (471)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEecC
Confidence 57999999999999999999999999999986
No 360
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=97.49 E-value=0.001 Score=78.40 Aligned_cols=98 Identities=21% Similarity=0.276 Sum_probs=74.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC------------Cc----ccHHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL------------NT----VDEEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l------------~~----~d~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
..|+|||||+.|+.+|..+++.|.+|+++++.. +. +. ...++.+.+.+.+++.|++++ ++.+
T Consensus 5 yDVvIIGgGpAGL~AA~~lar~g~~V~liE~~~-~GG~~~~~~~i~~~pg~~~~~~~~l~~~l~~~~~~~gv~~~-~~~V 82 (555)
T TIGR03143 5 YDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKDD-FGGQITITSEVVNYPGILNTTGPELMQEMRQQAQDFGVKFL-QAEV 82 (555)
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCceEEeccccccCCCCcCCCHHHHHHHHHHHHHHcCCEEe-ccEE
Confidence 469999999999999999999999999999754 21 11 124667777888888999986 6788
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+..+++...+... ++ .+.+|.+|+|+|.+|....
T Consensus 83 ~~i~~~~~~~~V~~~--~g-------~~~a~~lVlATGa~p~~~~ 118 (555)
T TIGR03143 83 LDVDFDGDIKTIKTA--RG-------DYKTLAVLIATGASPRKLG 118 (555)
T ss_pred EEEEecCCEEEEEec--CC-------EEEEeEEEECCCCccCCCC
Confidence 888765544444332 33 5788999999999887643
No 361
>PRK06370 mercuric reductase; Validated
Probab=97.48 E-value=0.00061 Score=78.65 Aligned_cols=100 Identities=14% Similarity=0.192 Sum_probs=66.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 172 ~~vvVIGgG~~g~E~A~~l~~~G~~Vtli~~~~------~~l---------~~--------------------------~ 210 (463)
T PRK06370 172 EHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGP------RLL---------PR--------------------------E 210 (463)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC------CCC---------cc--------------------------c
Confidence 679999999999999999999999999999862 211 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g~~i~~d~lViATGs~p~~ 546 (866)
..+. ...+...+++.||+++.++.+. +.. +.....+.+.. .++..+.+|.||+|+|..|..
T Consensus 211 ~~~~--------------~~~l~~~l~~~GV~i~~~~~V~~i~~-~~~~~~v~~~~~~~~~~i~~D~Vi~A~G~~pn~ 273 (463)
T PRK06370 211 DEDV--------------AAAVREILEREGIDVRLNAECIRVER-DGDGIAVGLDCNGGAPEITGSHILVAVGRVPNT 273 (463)
T ss_pred CHHH--------------HHHHHHHHHhCCCEEEeCCEEEEEEE-cCCEEEEEEEeCCCceEEEeCEEEECcCCCcCC
Confidence 0000 0112345677899999886655 322 11112233332 234679999999999999874
No 362
>KOG1336|consensus
Probab=97.48 E-value=0.00091 Score=73.39 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=78.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
...|+++|+|..|+.+|..|...+.+|++|++.+. |.|.
T Consensus 213 ~~~vV~vG~G~ig~Evaa~l~~~~~~VT~V~~e~~---------------~~~~-------------------------- 251 (478)
T KOG1336|consen 213 GGKVVCVGGGFIGMEVAAALVSKAKSVTVVFPEPW---------------LLPR-------------------------- 251 (478)
T ss_pred CceEEEECchHHHHHHHHHHHhcCceEEEEccCcc---------------chhh--------------------------
Confidence 46799999999999999999999999999998621 1111
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
-+...+.+.++.+++++||+++.++.+..-.-+...+...|...++.++.+|-||+.+|++|...
T Consensus 252 -------------lf~~~i~~~~~~y~e~kgVk~~~~t~~s~l~~~~~Gev~~V~l~dg~~l~adlvv~GiG~~p~t~ 316 (478)
T KOG1336|consen 252 -------------LFGPSIGQFYEDYYENKGVKFYLGTVVSSLEGNSDGEVSEVKLKDGKTLEADLVVVGIGIKPNTS 316 (478)
T ss_pred -------------hhhHHHHHHHHHHHHhcCeEEEEecceeecccCCCCcEEEEEeccCCEeccCeEEEeeccccccc
Confidence 01112334467789999999999998773212223456667777889999999999999998853
No 363
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=97.48 E-value=0.00049 Score=76.87 Aligned_cols=97 Identities=19% Similarity=0.290 Sum_probs=71.6
Q ss_pred eEEEECCcHHHHHHHHHHHhc---CCcEEEEecCCcCC--Ccc---------cHHHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRL---GSEVTILEMSSNFL--NTV---------DEEIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~---g~~Vtli~~~~~~l--~~~---------d~~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
+|+|||||+.|+.+|..+.+. +.+|+++++.+.+. +.+ ..++...+.+.+++.|++++.+ .|+++
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 79 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTPYSGMLPGMIAGHYSLDEIRIDLRRLARQAGARFVIA-EATGI 79 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCCCCcccchhhHHHheeCCHHHhcccHHHHHHhcCCEEEEE-EEEEE
Confidence 589999999999999998643 57899999887642 111 1233444566777889999875 78888
Q ss_pred EEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 638 ~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..++.. +.+. +|+ ++.+|.+|+|+|.+|+...
T Consensus 80 d~~~~~--V~~~--~g~------~~~yD~LviAtG~~~~~~~ 111 (364)
T TIGR03169 80 DPDRRK--VLLA--NRP------PLSYDVLSLDVGSTTPLSG 111 (364)
T ss_pred ecccCE--EEEC--CCC------cccccEEEEccCCCCCCCC
Confidence 776543 3343 555 7899999999999987654
No 364
>PRK06116 glutathione reductase; Validated
Probab=97.47 E-value=0.0005 Score=79.13 Aligned_cols=99 Identities=20% Similarity=0.127 Sum_probs=68.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. +. .
T Consensus 168 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~----- 206 (450)
T PRK06116 168 KRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGD------APL---------RG---------------------F----- 206 (450)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEecCC------CCc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.. .+...+...+++.||+++.++.+. +.. .+...+.+...++.++.+|.||+|+|..|..
T Consensus 207 ~~--------------~~~~~l~~~L~~~GV~i~~~~~V~~i~~--~~~g~~~v~~~~g~~i~~D~Vv~a~G~~p~~ 267 (450)
T PRK06116 207 DP--------------DIRETLVEEMEKKGIRLHTNAVPKAVEK--NADGSLTLTLEDGETLTVDCLIWAIGREPNT 267 (450)
T ss_pred CH--------------HHHHHHHHHHHHCCcEEECCCEEEEEEE--cCCceEEEEEcCCcEEEeCEEEEeeCCCcCC
Confidence 00 001123345677899999887665 321 1112245555567789999999999998874
No 365
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=97.47 E-value=0.0005 Score=78.02 Aligned_cols=99 Identities=25% Similarity=0.366 Sum_probs=70.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||+|++|+.+|..|++.|++|+++|+. +.+++....
T Consensus 136 ~~~v~vvG~G~~gle~A~~~~~~G~~v~l~e~~------~~~~~~~~~-------------------------------- 177 (415)
T COG0446 136 PKDVVVVGAGPIGLEAAEAAAKRGKKVTLIEAA------DRLGGQLLD-------------------------------- 177 (415)
T ss_pred cCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcc------cccchhhhh--------------------------------
Confidence 378999999999999999999999999999997 455442100
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEE---EEcCCceEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQ---IINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~---v~~~~g~~i~~d~lViATGs~p~ 545 (866)
..+...+...++++||+++.+..+. ++. ...... +....+..+++|.+++++|.+|.
T Consensus 178 ----------------~~~~~~~~~~l~~~gi~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~p~ 238 (415)
T COG0446 178 ----------------PEVAEELAELLEKYGVELLLGTKVVGVEG---KGNTLVVERVVGIDGEEIKADLVIIGPGERPN 238 (415)
T ss_pred ----------------HHHHHHHHHHHHHCCcEEEeCCceEEEEc---ccCcceeeEEEEeCCcEEEeeEEEEeeccccc
Confidence 0011224556788899998888766 332 111111 33345678999999999999985
No 366
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=97.46 E-value=0.00057 Score=78.82 Aligned_cols=98 Identities=13% Similarity=0.165 Sum_probs=68.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||+|+.|+.+|..|++.|.+|++|++.+ .+....
T Consensus 178 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtli~~~~------~~l~~~----------------------------------- 216 (466)
T PRK07845 178 EHLIVVGSGVTGAEFASAYTELGVKVTLVSSRD------RVLPGE----------------------------------- 216 (466)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC------cCCCCC-----------------------------------
Confidence 579999999999999999999999999999862 211000
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+ ....+...+++.||+++.+..+. +.. ....+.+...+++++.+|.|++|+|..|..
T Consensus 217 d~~--------------~~~~l~~~L~~~gV~i~~~~~v~~v~~---~~~~~~v~~~~g~~l~~D~vl~a~G~~pn~ 276 (466)
T PRK07845 217 DAD--------------AAEVLEEVFARRGMTVLKRSRAESVER---TGDGVVVTLTDGRTVEGSHALMAVGSVPNT 276 (466)
T ss_pred CHH--------------HHHHHHHHHHHCCcEEEcCCEEEEEEE---eCCEEEEEECCCcEEEecEEEEeecCCcCC
Confidence 000 01113445778899999887654 321 113355554566789999999999999874
No 367
>PLN02507 glutathione reductase
Probab=97.45 E-value=0.00057 Score=79.38 Aligned_cols=98 Identities=13% Similarity=0.090 Sum_probs=68.5
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..+++.|.+|+|+++.+ .+- |.
T Consensus 204 k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~------~~l---------~~--------------------------- 241 (499)
T PLN02507 204 KRAVVLGGGYIAVEFASIWRGMGATVDLFFRKE------LPL---------RG--------------------------- 241 (499)
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEecC------CcC---------cc---------------------------
Confidence 579999999999999999999999999999862 110 00
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
++. .+...+...+++.||+++.+..+. +.. ..+.+.+...++.++.+|.|++|+|..|..
T Consensus 242 -~d~------------~~~~~l~~~l~~~GI~i~~~~~V~~i~~---~~~~~~v~~~~g~~i~~D~vl~a~G~~pn~ 302 (499)
T PLN02507 242 -FDD------------EMRAVVARNLEGRGINLHPRTNLTQLTK---TEGGIKVITDHGEEFVADVVLFATGRAPNT 302 (499)
T ss_pred -cCH------------HHHHHHHHHHHhCCCEEEeCCEEEEEEE---eCCeEEEEECCCcEEEcCEEEEeecCCCCC
Confidence 000 001113345677899999887655 321 123455555566789999999999998874
No 368
>TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
Probab=97.45 E-value=0.00061 Score=78.72 Aligned_cols=100 Identities=16% Similarity=0.224 Sum_probs=66.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||+|+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 167 ~~vvIIGgG~~g~E~A~~l~~~g~~Vtli~~~~------~~l---------~~--------------------------~ 205 (463)
T TIGR02053 167 ESLAVIGGGAIGVELAQAFARLGSEVTILQRSD------RLL---------PR--------------------------E 205 (463)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC------cCC---------Cc--------------------------c
Confidence 579999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcC-CceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINK-TKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~-~g~~i~~d~lViATGs~p~~ 546 (866)
..++. ..+...+++.||+++.++.+. +.. +.....+.+... +++++.+|.||+|+|..|..
T Consensus 206 d~~~~--------------~~l~~~l~~~gV~i~~~~~V~~i~~-~~~~~~v~~~~~~~~~~i~~D~ViiA~G~~p~~ 268 (463)
T TIGR02053 206 EPEIS--------------AAVEEALAEEGIEVVTSAQVKAVSV-RGGGKIITVEKPGGQGEVEADELLVATGRRPNT 268 (463)
T ss_pred CHHHH--------------HHHHHHHHHcCCEEEcCcEEEEEEE-cCCEEEEEEEeCCCceEEEeCEEEEeECCCcCC
Confidence 00000 112345677899999987554 322 111122333322 23689999999999998874
No 369
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=97.45 E-value=0.0003 Score=81.07 Aligned_cols=90 Identities=28% Similarity=0.368 Sum_probs=70.7
Q ss_pred cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------C--cccHHHHHHHHHHHHHcCCEEEeCceEEEEE
Q psy9583 568 NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------N--TVDEEIAKKAFHLLNKQGLNIILNTKIHDIK 638 (866)
Q Consensus 568 ~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 638 (866)
..+++|+|||||+.|+++|..|++.|.+|+++++.+.+. + .++.++.....+.+++.|+++++++.+..
T Consensus 138 ~~~~~VvIIGgGpaGl~aA~~l~~~g~~V~lie~~~~~gG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~-- 215 (457)
T PRK11749 138 KTGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLLRYGIPEFRLPKDIVDREVERLLKLGVEIRTNTEVGR-- 215 (457)
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCCCCcEeeccCCCccCCHHHHHHHHHHHHHcCCEEEeCCEECC--
Confidence 346899999999999999999999999999999987653 1 23667778888889999999999887621
Q ss_pred EcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 639 INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 639 ~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
.+.+. +. .+.+|.||+|||..
T Consensus 216 ------~v~~~--~~-------~~~~d~vvlAtGa~ 236 (457)
T PRK11749 216 ------DITLD--EL-------RAGYDAVFIGTGAG 236 (457)
T ss_pred ------ccCHH--HH-------HhhCCEEEEccCCC
Confidence 01111 11 36789999999985
No 370
>PLN02661 Putative thiazole synthesis
Probab=97.45 E-value=0.0051 Score=66.58 Aligned_cols=169 Identities=16% Similarity=0.156 Sum_probs=97.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhc-CCcEEEEecCCcCCC---------------------------ccc-----------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRL-GSEVTILEMSSNFLN---------------------------TVD----------- 610 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~-g~~Vtli~~~~~~l~---------------------------~~d----------- 610 (866)
.-.|+|||+|..|+-+|..+++. |.+|+++++...+.. .++
T Consensus 92 ~~DVlIVGaG~AGl~AA~~La~~~g~kV~viEk~~~~GGG~~~gg~l~~~~vv~~~a~e~LeElGV~fd~~dgy~vv~ha 171 (357)
T PLN02661 92 DTDVVIVGAGSAGLSCAYELSKNPNVKVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVPYDEQENYVVIKHA 171 (357)
T ss_pred cCCEEEECCHHHHHHHHHHHHHcCCCeEEEEecCcccccceeeCcccccccccccHHHHHHHHcCCCcccCCCeeEecch
Confidence 35899999999999999999976 889999998654311 001
Q ss_pred HHHHHHHH-HHHHHcCCEEEeCceEEEEEEcCCeEEEEEee-----CCCCcc--ceeEEEeccEEEEeeccccCCCCCC-
Q psy9583 611 EEIAKKAF-HLLNKQGLNIILNTKIHDIKINKENVLINYSN-----KSTNVK--TEIITSIFDKLLIAIGRIPNTNNLN- 681 (866)
Q Consensus 611 ~~~~~~l~-~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~-----~~g~~~--~~~~~~~~D~vi~a~G~~p~~~~l~- 681 (866)
.++...+. +.+++.|++++.++.+.++..+++.+.-.+.+ .++... .+...+.++.||+|||..+......
T Consensus 172 ~e~~stLi~ka~~~~gVkI~~~t~V~DLI~~~grVaGVVvnw~~v~~~~~~~s~~dp~~I~AkaVVlATGh~g~~ga~~~ 251 (357)
T PLN02661 172 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGDRVGGVVTNWALVAQNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 251 (357)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCeEeeeEEecCCEEEEEEeecchhhhccCCCCccceeEEECCEEEEcCCCCCcchhhhh
Confidence 11112233 33445789999999999988766544322210 011100 1234789999999999654321111
Q ss_pred --ccccCeee--cCCCcEEeCC-------CCCCCCCCEEEecccCC----CCC--cHHHH-HHHHHHHHHHHhCC
Q psy9583 682 --IDKIGLKV--NENNFIIVND-------NCETNIPNIYAIGDVVR----GPM--LAHKA-EEEGIMVAEHISGQ 738 (866)
Q Consensus 682 --l~~~gl~~--~~~G~i~Vd~-------~l~Ts~~~VyA~GD~a~----~~~--~~~~A-~~~g~~aa~~i~g~ 738 (866)
+...|+.. ..-...+++. +-+--+||+|++|=.+. .|+ -...+ ...|+.||+.|+..
T Consensus 252 ~~~~~~g~~~~~pg~~~~~~~~~e~~~v~~t~ev~pgl~~~gm~~~~~~g~~rmgp~fg~m~~sg~k~a~~~~~~ 326 (357)
T PLN02661 252 KRLKSIGMIDSVPGMKALDMNAAEDAIVRLTREVVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKA 326 (357)
T ss_pred hcccccCCccCCCCccccchhhHHHHHHhccCcccCCEEEeccchhhhcCCCccCchhHhHHhhhHHHHHHHHHH
Confidence 11122210 0011122221 11123799999998774 232 23344 46788899888754
No 371
>PRK14989 nitrite reductase subunit NirD; Provisional
Probab=97.44 E-value=0.00058 Score=83.64 Aligned_cols=99 Identities=20% Similarity=0.350 Sum_probs=73.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhc----CCcEEEEecCCcCC--C-cc--------cHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL----GSEVTILEMSSNFL--N-TV--------DEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~----g~~Vtli~~~~~~l--~-~~--------d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
++++|||+|+.|+.+|..|.+. +.+|+++.+.+++. + .+ ..++.....+.+++.||+++.++.+.
T Consensus 4 ~kIVIVG~G~AG~~aa~~L~~~~~~~~~~Itvi~~e~~~~Y~r~~L~~~~~~~~~~~l~~~~~~~~~~~gI~~~~g~~V~ 83 (847)
T PRK14989 4 VRLAIIGNGMVGHRFIEDLLDKADAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAI 83 (847)
T ss_pred CcEEEECCCHHHHHHHHHHHhhCCCCCCeEEEEECCCCCcccCCcchHhHcCCCHHHccCCCHHHHHhCCCEEEcCCEEE
Confidence 5899999999999999999765 46899999887742 1 11 12222333466788999999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
++..+.. .+.+ .+|. .+.+|.+|+|||..|....
T Consensus 84 ~Id~~~~--~V~~--~~G~------~i~yD~LVIATGs~p~~p~ 117 (847)
T PRK14989 84 TINRQEK--VIHS--SAGR------TVFYDKLIMATGSYPWIPP 117 (847)
T ss_pred EEeCCCc--EEEE--CCCc------EEECCEEEECCCCCcCCCC
Confidence 8876542 2333 2554 7999999999999987654
No 372
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=97.43 E-value=0.00027 Score=81.00 Aligned_cols=93 Identities=26% Similarity=0.362 Sum_probs=70.6
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------C--cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------N--TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .++.++.....+.+++.||++++++.+..
T Consensus 132 ~~~~V~IIG~G~aGl~aA~~l~~~G~~V~vie~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~--- 208 (449)
T TIGR01316 132 THKKVAVIGAGPAGLACASELAKAGHSVTVFEALHKPGGVVTYGIPEFRLPKEIVVTEIKTLKKLGVTFRMNFLVGK--- 208 (449)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCcEeeecCCCccCCHHHHHHHHHHHHhCCcEEEeCCccCC---
Confidence 35799999999999999999999999999999876542 2 24667777777889999999999885511
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeecc-ccCCC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR-IPNTN 678 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~-~p~~~ 678 (866)
.+.+. +. ...+|.||+|+|. .|...
T Consensus 209 -----~v~~~--~~-------~~~yd~viiAtGa~~p~~~ 234 (449)
T TIGR01316 209 -----TATLE--EL-------FSQYDAVFIGTGAGLPKLM 234 (449)
T ss_pred -----cCCHH--HH-------HhhCCEEEEeCCCCCCCcC
Confidence 12221 11 2458999999997 56543
No 373
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.43 E-value=0.0015 Score=74.29 Aligned_cols=103 Identities=11% Similarity=0.235 Sum_probs=74.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC----C---ccc--------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL----N---TVD-------------------------------- 610 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l----~---~~d-------------------------------- 610 (866)
..+|+|||||+.|+-+|..|++.|.+|+++++.+... . .+.
T Consensus 18 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~l~~~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~ 97 (415)
T PRK07364 18 TYDVAIVGGGIVGLTLAAALKDSGLRIALIEAQPAEAAAAKGQAYALSLLSARIFEGIGVWEKILPQIGKFRQIRLSDAD 97 (415)
T ss_pred ccCEEEECcCHHHHHHHHHHhcCCCEEEEEecCCccccCCCCcEEEechHHHHHHHHCChhhhhHhhcCCccEEEEEeCC
Confidence 4579999999999999999999999999998765321 0 000
Q ss_pred -----------------------HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 611 -----------------------EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 611 -----------------------~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
..+.+.+.+.+.+ .|+++++++++++++.+++.+.+++...++ ..++++|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~-----~~~i~adl 172 (415)
T PRK07364 98 YPGVVKFQPTDLGTEALGYVGEHQVLLEALQEFLQSCPNITWLCPAEVVSVEYQQDAATVTLEIEGK-----QQTLQSKL 172 (415)
T ss_pred CCceeeeccccCCCCccEEEEecHHHHHHHHHHHhcCCCcEEEcCCeeEEEEecCCeeEEEEccCCc-----ceEEeeeE
Confidence 1112223333444 379999999999998887777777753222 23699999
Q ss_pred EEEeeccccCC
Q psy9583 667 LLIAIGRIPNT 677 (866)
Q Consensus 667 vi~a~G~~p~~ 677 (866)
||.|.|.....
T Consensus 173 vIgADG~~S~v 183 (415)
T PRK07364 173 VVAADGARSPI 183 (415)
T ss_pred EEEeCCCCchh
Confidence 99999987654
No 374
>PTZ00153 lipoamide dehydrogenase; Provisional
Probab=97.42 E-value=0.0015 Score=77.50 Aligned_cols=32 Identities=16% Similarity=0.053 Sum_probs=30.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+++|||||+.|+..|..+++.|.+|+|||+.
T Consensus 313 k~VvIVGgG~iGvE~A~~l~~~G~eVTLIe~~ 344 (659)
T PTZ00153 313 NYMGIVGMGIIGLEFMDIYTALGSEVVSFEYS 344 (659)
T ss_pred CceEEECCCHHHHHHHHHHHhCCCeEEEEecc
Confidence 57999999999999999999999999999986
No 375
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]
Probab=97.42 E-value=0.00016 Score=74.96 Aligned_cols=42 Identities=31% Similarity=0.516 Sum_probs=39.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
++|++|||+|.+|...|..|+++|.+|+||||+ +++||.|.-
T Consensus 1 ~fd~lIVGaGlsG~V~A~~a~~~gk~VLIvekR------~HIGGNaYd 42 (374)
T COG0562 1 MFDYLIVGAGLSGAVIAEVAAQLGKRVLIVEKR------NHIGGNAYD 42 (374)
T ss_pred CCcEEEECCchhHHHHHHHHHHcCCEEEEEecc------ccCCCcccc
Confidence 389999999999999999999999999999998 899999843
No 376
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=97.41 E-value=0.0015 Score=73.71 Aligned_cols=100 Identities=13% Similarity=0.216 Sum_probs=76.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-----C-----cc------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-----N-----TV------------------------------ 609 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-----~-----~~------------------------------ 609 (866)
..+|+|||||+.|+-+|..|++.|.+|+++++.+..- + .+
T Consensus 6 ~~dV~IvGaG~aGl~~A~~La~~G~~v~liE~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 85 (392)
T PRK08773 6 RRDAVIVGGGVVGAACALALADAGLSVALVEGREPPRWQADQPDLRVYAFAADNAALLDRLGVWPAVRAARAQPYRRMRV 85 (392)
T ss_pred CCCEEEECcCHHHHHHHHHHhcCCCEEEEEeCCCCcccccCCCCCEEEEecHHHHHHHHHCCchhhhhHhhCCcccEEEE
Confidence 3579999999999999999999999999999854210 0 00
Q ss_pred --------------------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 610 --------------------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 610 --------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
...+.+.+.+.+++.|++++.++.+++++.+++++.+++. +|. ++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~g~------~~~ 157 (392)
T PRK08773 86 WDAGGGGELGFDADTLGREQLGWIVENDLLVDRLWAALHAAGVQLHCPARVVALEQDADRVRLRLD--DGR------RLE 157 (392)
T ss_pred EeCCCCceEEechhccCCCcCEEEEEhHHHHHHHHHHHHhCCCEEEcCCeEEEEEecCCeEEEEEC--CCC------EEE
Confidence 0223444556667789999999999999887777766654 554 789
Q ss_pred ccEEEEeeccccCC
Q psy9583 664 FDKLLIAIGRIPNT 677 (866)
Q Consensus 664 ~D~vi~a~G~~p~~ 677 (866)
+|.||.|.|..+..
T Consensus 158 a~~vV~AdG~~S~v 171 (392)
T PRK08773 158 AALAIAADGAASTL 171 (392)
T ss_pred eCEEEEecCCCchH
Confidence 99999999998754
No 377
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=97.41 E-value=0.00013 Score=81.22 Aligned_cols=42 Identities=29% Similarity=0.468 Sum_probs=38.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcccee
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNV 438 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~ 438 (866)
++|+|+|||.|||+||..|++.|++|+|+|.+ +.+||.|..+
T Consensus 1 ~rVai~GaG~AgL~~a~~La~~g~~vt~~ea~------~~~GGk~~s~ 42 (485)
T COG3349 1 MRVAIAGAGLAGLAAAYELADAGYDVTLYEAR------DRLGGKVASW 42 (485)
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCceEEEecc------CccCceeeee
Confidence 36999999999999999999999999999998 8999988543
No 378
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.39 E-value=0.00062 Score=78.38 Aligned_cols=92 Identities=20% Similarity=0.392 Sum_probs=71.4
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------C--cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------N--TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .++.++.....+.+++.|+++++++.+...
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~-- 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD-- 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc--
Confidence 46899999999999999999999999999999887652 2 246677777788899999999999876320
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
+.+. + . ...+|.||+|+|..+..
T Consensus 218 ------~~~~--~-~------~~~~D~vilAtGa~~~~ 240 (467)
T TIGR01318 218 ------ISLD--D-L------LEDYDAVFLGVGTYRSM 240 (467)
T ss_pred ------cCHH--H-H------HhcCCEEEEEeCCCCCC
Confidence 1111 1 1 24689999999998753
No 379
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=97.39 E-value=0.00071 Score=77.63 Aligned_cols=99 Identities=17% Similarity=0.077 Sum_probs=67.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..|++.|.+|+|+++.+ .+... +
T Consensus 167 ~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~------~il~~------------------------------~----- 205 (450)
T TIGR01421 167 KRVVIVGAGYIAVELAGVLHGLGSETHLVIRHE------RVLRS------------------------------F----- 205 (450)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC------CCCcc------------------------------c-----
Confidence 579999999999999999999999999999862 11000 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~ 546 (866)
+.+ +...+...+++.||+++.+..+. +.. + ....+.+..+++ ..+.+|.||+|+|..|..
T Consensus 206 d~~--------------~~~~~~~~l~~~gI~i~~~~~v~~i~~-~-~~~~~~v~~~~g~~~i~~D~vi~a~G~~pn~ 267 (450)
T TIGR01421 206 DSM--------------ISETITEEYEKEGINVHKLSKPVKVEK-T-VEGKLVIHFEDGKSIDDVDELIWAIGRKPNT 267 (450)
T ss_pred CHH--------------HHHHHHHHHHHcCCEEEcCCEEEEEEE-e-CCceEEEEECCCcEEEEcCEEEEeeCCCcCc
Confidence 000 01113345677899999887655 321 1 112244444455 679999999999999874
No 380
>PRK08132 FAD-dependent oxidoreductase; Provisional
Probab=97.38 E-value=0.0022 Score=75.78 Aligned_cols=103 Identities=13% Similarity=0.187 Sum_probs=75.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-----c-----------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-----V----------------------------------- 609 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-----~----------------------------------- 609 (866)
..+|+|||+|+.|+-+|..|.+.|.+|+++++.+.+... +
T Consensus 23 ~~dVlIVGaGpaGl~lA~~L~~~G~~v~viE~~~~~~~~~ra~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 102 (547)
T PRK08132 23 RHPVVVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLSTGSRAICFAKRSLEIFDRLGCGERMVDKGVSWNVGKVFLRDEE 102 (547)
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCeEEEEcHHHHHHHHHcCCcHHHHhhCceeeceeEEeCCCe
Confidence 457999999999999999999999999999876532110 0
Q ss_pred ---------------------cHHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEE
Q psy9583 610 ---------------------DEEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKL 667 (866)
Q Consensus 610 ---------------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~v 667 (866)
...+...+.+.+.+. |+++++++++++++.+++++.+.+...++. .++.+|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~q~~le~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~v~v~~~~~~g~-----~~i~ad~v 177 (547)
T PRK08132 103 VYRFDLLPEPGHRRPAFINLQQYYVEGYLVERAQALPNIDLRWKNKVTGLEQHDDGVTLTVETPDGP-----YTLEADWV 177 (547)
T ss_pred EEEecCCCCCCCCCCceEecCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEcCCEEEEEEECCCCc-----EEEEeCEE
Confidence 001122334444443 799999999999998888877777643442 36899999
Q ss_pred EEeeccccCC
Q psy9583 668 LIAIGRIPNT 677 (866)
Q Consensus 668 i~a~G~~p~~ 677 (866)
|.|.|.....
T Consensus 178 VgADG~~S~v 187 (547)
T PRK08132 178 IACDGARSPL 187 (547)
T ss_pred EECCCCCcHH
Confidence 9999987654
No 381
>PLN02463 lycopene beta cyclase
Probab=97.38 E-value=0.0015 Score=74.43 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=73.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-C-c-------c--------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-N-T-------V-------------------------------- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-~-~-------~-------------------------------- 609 (866)
-.|+|||||+.|+-+|..|++.|.+|.++++.+... + . +
T Consensus 29 ~DVvIVGaGpAGLalA~~La~~Gl~V~liE~~~~~~~p~~~g~w~~~l~~lgl~~~l~~~w~~~~v~~~~~~~~~~~~~y 108 (447)
T PLN02463 29 VDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPSPLSIWPNNYGVWVDEFEALGLLDCLDTTWPGAVVYIDDGKKKDLDRPY 108 (447)
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEeccCccchhccccchHHHHHHHCCcHHHHHhhCCCcEEEEeCCCCccccCcc
Confidence 479999999999999999999999999998865221 0 0 0
Q ss_pred ----cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 610 ----DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 610 ----d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
..++.+.+.+.+.+.|++++ ...|++++.++++..+.+. +|. ++.+|.||.|+|..+.
T Consensus 109 ~~V~R~~L~~~Ll~~~~~~GV~~~-~~~V~~I~~~~~~~~V~~~--dG~------~i~A~lVI~AdG~~s~ 170 (447)
T PLN02463 109 GRVNRKKLKSKMLERCIANGVQFH-QAKVKKVVHEESKSLVVCD--DGV------KIQASLVLDATGFSRC 170 (447)
T ss_pred eeEEHHHHHHHHHHHHhhcCCEEE-eeEEEEEEEcCCeEEEEEC--CCC------EEEcCEEEECcCCCcC
Confidence 12233455566677899997 5789999887777666664 565 8999999999998754
No 382
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=97.38 E-value=0.0025 Score=73.61 Aligned_cols=99 Identities=22% Similarity=0.280 Sum_probs=65.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..|++.|.+|+++++. +.+. |. .
T Consensus 170 k~v~VIGgG~~g~E~A~~l~~~g~~Vtli~~~------~~~l---------~~---------~----------------- 208 (460)
T PRK06292 170 KSLAVIGGGVIGLELGQALSRLGVKVTVFERG------DRIL---------PL---------E----------------- 208 (460)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecC------CCcC---------cc---------h-----------------
Confidence 68999999999999999999999999999986 2211 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc--CCceEEEecEEEEecCCCCcCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN--KTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~--~~g~~i~~d~lViATGs~p~~~ 547 (866)
..+ +...+...+++. |+++.+..+. +.. + ....+.+.. .++.++.+|.+++|+|..|...
T Consensus 209 d~~--------------~~~~~~~~l~~~-I~i~~~~~v~~i~~-~-~~~~v~~~~~~~~~~~i~~D~vi~a~G~~p~~~ 271 (460)
T PRK06292 209 DPE--------------VSKQAQKILSKE-FKIKLGAKVTSVEK-S-GDEKVEELEKGGKTETIEADYVLVATGRRPNTD 271 (460)
T ss_pred hHH--------------HHHHHHHHHhhc-cEEEcCCEEEEEEE-c-CCceEEEEEcCCceEEEEeCEEEEccCCccCCC
Confidence 000 011123446667 8988876655 321 1 112344422 2336799999999999988743
No 383
>PRK06184 hypothetical protein; Provisional
Probab=97.37 E-value=0.0021 Score=75.15 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=75.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-----c------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-----V------------------------------------ 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-----~------------------------------------ 609 (866)
-+|+|||||+.|+-+|..|++.|.+|+++++.+.+... +
T Consensus 4 ~dVlIVGaGpaGl~~A~~La~~Gi~v~viE~~~~~~~~~ra~~l~~~~~e~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 83 (502)
T PRK06184 4 TDVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPFPGSRGKGIQPRTQEVFDDLGVLDRVVAAGGLYPPMRIYRDDGSV 83 (502)
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCcCccceeecHHHHHHHHHcCcHHHHHhcCccccceeEEeCCceE
Confidence 46999999999999999999999999999876432100 0
Q ss_pred ------------------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEecc
Q psy9583 610 ------------------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFD 665 (866)
Q Consensus 610 ------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D 665 (866)
-..+.+.+.+.+.+.|+++++++++++++.+++++.+.+...++ ..++.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~i~q~~le~~L~~~l~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~~~-----~~~i~a~ 158 (502)
T PRK06184 84 AESDMFAHLEPTPDEPYPLPLMVPQWRTERILRERLAELGHRVEFGCELVGFEQDADGVTARVAGPAG-----EETVRAR 158 (502)
T ss_pred EEeeccccccCCCCCCCCcceecCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEEcCCcEEEEEEeCCC-----eEEEEeC
Confidence 01123345566777899999999999999888887777643222 2379999
Q ss_pred EEEEeecccc
Q psy9583 666 KLLIAIGRIP 675 (866)
Q Consensus 666 ~vi~a~G~~p 675 (866)
.||.|.|...
T Consensus 159 ~vVgADG~~S 168 (502)
T PRK06184 159 YLVGADGGRS 168 (502)
T ss_pred EEEECCCCch
Confidence 9999999765
No 384
>TIGR02730 carot_isom carotene isomerase. Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization.
Probab=97.36 E-value=0.00015 Score=84.29 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
..+.+.+.+.+++.|++|++++.|++|..+++.+ .+.+ .+|. ++.+|.||+++|...
T Consensus 229 ~~l~~~L~~~~~~~G~~i~~~~~V~~I~~~~~~~~gv~~--~~g~------~~~ad~vV~a~~~~~ 286 (493)
T TIGR02730 229 GQIAESLVKGLEKHGGQIRYRARVTKIILENGKAVGVKL--ADGE------KIYAKRIVSNATRWD 286 (493)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeeeEEEecCCcEEEEEe--CCCC------EEEcCEEEECCChHH
Confidence 5678889999999999999999999998765543 3333 3554 789999999988643
No 385
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed
Probab=97.35 E-value=0.00048 Score=84.12 Aligned_cols=32 Identities=19% Similarity=0.499 Sum_probs=30.1
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~ 422 (866)
++|+||||||||+++|..|++. |++|+|+|+.
T Consensus 1 m~V~IIGaGpAGLaaAi~L~~~~~G~~V~vlEr~ 34 (765)
T PRK08255 1 MRIVCIGGGPAGLYFALLMKLLDPAHEVTVVERN 34 (765)
T ss_pred CeEEEECCCHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 3699999999999999999998 8999999997
No 386
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD. Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.
Probab=97.35 E-value=0.00016 Score=84.13 Aligned_cols=61 Identities=8% Similarity=0.182 Sum_probs=44.7
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeE-EEEEeeC-CCCccceeEEEeccEEEEeeccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENV-LINYSNK-STNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
-..+.+.+.+.+++.|++|++++.|++|..+++.. .+.+.++ ++. ..++.+|.||+++...
T Consensus 231 ~~~l~~aL~~~~~~~G~~i~~~~~V~~I~~~~~~~~gv~~~~~~~~~----~~~~~ad~VI~~~~~~ 293 (492)
T TIGR02733 231 MQTLSDRLVEALKRDGGNLLTGQRVTAIHTKGGRAGWVVVVDSRKQE----DLNVKADDVVANLPPQ 293 (492)
T ss_pred HHHHHHHHHHHHHhcCCEEeCCceEEEEEEeCCeEEEEEEecCCCCc----eEEEECCEEEECCCHH
Confidence 45688889999999999999999999998876643 2333321 111 1368899999998754
No 387
>PRK08163 salicylate hydroxylase; Provisional
Probab=97.35 E-value=0.0019 Score=72.92 Aligned_cols=100 Identities=20% Similarity=0.213 Sum_probs=73.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------------------c-----------------c----
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------V-----------------D---- 610 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------~-----------------d---- 610 (866)
+.+|+|||||+.|+-+|..|++.|.+|+++++.+.+... + +
T Consensus 4 ~~~V~IvGaGiaGl~~A~~L~~~g~~v~v~Er~~~~~~~g~gi~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
T PRK08163 4 VTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIGEIGAGIQLGPNAFSALDALGVGEAARQRAVFTDHLTMMDAVDA 83 (396)
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEeeCcccccccceeeeCchHHHHHHHcCChHHHHhhccCCcceEEEeCCCC
Confidence 568999999999999999999999999999986542110 0 0
Q ss_pred -------------------------HHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEec
Q psy9583 611 -------------------------EEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIF 664 (866)
Q Consensus 611 -------------------------~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~ 664 (866)
.++.+.+.+.+.+. ++++++++.+++++.+++++.+.+. +|. ++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~v~~~~~~~v~~i~~~~~~v~v~~~--~g~------~~~a 155 (396)
T PRK08163 84 EEVVRIPTGQAFRARFGNPYAVIHRADIHLSLLEAVLDHPLVEFRTSTHVVGIEQDGDGVTVFDQ--QGN------RWTG 155 (396)
T ss_pred CEEEEeccchhHHHhcCCcEEEEEHHHHHHHHHHHHHhcCCcEEEeCCEEEEEecCCCceEEEEc--CCC------EEec
Confidence 01122333444444 4999999999999877777666554 555 7899
Q ss_pred cEEEEeeccccCC
Q psy9583 665 DKLLIAIGRIPNT 677 (866)
Q Consensus 665 D~vi~a~G~~p~~ 677 (866)
|.||.|.|.....
T Consensus 156 d~vV~AdG~~S~~ 168 (396)
T PRK08163 156 DALIGCDGVKSVV 168 (396)
T ss_pred CEEEECCCcChHH
Confidence 9999999987654
No 388
>PRK11883 protoporphyrinogen oxidase; Reviewed
Probab=97.35 E-value=0.00015 Score=83.50 Aligned_cols=39 Identities=31% Similarity=0.450 Sum_probs=35.9
Q ss_pred ceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+|+|||||+|||+||+.|++.| ++|+|+|+. +.+||.+.
T Consensus 2 ~v~IVGaGiaGL~aA~~L~~~G~~~~V~vlEa~------~~~GGr~~ 42 (451)
T PRK11883 2 KVAIIGGGITGLSAAYRLHKKGPDADITLLEAS------DRLGGKIQ 42 (451)
T ss_pred eEEEECCCHHHHHHHHHHHHhCCCCCEEEEEcC------CCCcceEE
Confidence 6999999999999999999987 899999998 78999763
No 389
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated
Probab=97.35 E-value=0.0022 Score=75.47 Aligned_cols=104 Identities=13% Similarity=0.214 Sum_probs=76.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-----c------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-----T------------------------------------ 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-----~------------------------------------ 608 (866)
..+|+|||+|+.|+-+|..|.+.|.+|+++++.+.+.. .
T Consensus 10 ~~dV~IVGaGp~Gl~lA~~L~~~G~~v~v~Er~~~~~~~~ra~~l~~~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~g~ 89 (538)
T PRK06183 10 DTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPRAVGIDDEALRVLQAIGLADEVLPHTTPNHGMRFLDAKGR 89 (538)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCCCCceeeeCHHHHHHHHHcCChhHHHhhcccCCceEEEcCCCC
Confidence 35799999999999999999999999999987653210 0
Q ss_pred ----cc-----------------HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 609 ----VD-----------------EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 609 ----~d-----------------~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
++ +++.+.+.+.+.+ .|+++++++++++++.+++++.+++++.+|+ ..++.+|.
T Consensus 90 ~~~~~~~~~~~~~g~~~~~~~~q~~le~~L~~~~~~~~gv~v~~g~~v~~i~~~~~~v~v~~~~~~G~----~~~i~ad~ 165 (538)
T PRK06183 90 CLAEIARPSTGEFGWPRRNAFHQPLLEAVLRAGLARFPHVRVRFGHEVTALTQDDDGVTVTLTDADGQ----RETVRARY 165 (538)
T ss_pred EEEEEcCCCCCCCCCChhccCChHHHHHHHHHHHHhCCCcEEEcCCEEEEEEEcCCeEEEEEEcCCCC----EEEEEEEE
Confidence 00 1122233344444 3899999999999999888888888643453 34799999
Q ss_pred EEEeeccccCC
Q psy9583 667 LLIAIGRIPNT 677 (866)
Q Consensus 667 vi~a~G~~p~~ 677 (866)
||-|.|.+...
T Consensus 166 vVgADG~~S~v 176 (538)
T PRK06183 166 VVGCDGANSFV 176 (538)
T ss_pred EEecCCCchhH
Confidence 99999986544
No 390
>PLN02576 protoporphyrinogen oxidase
Probab=97.35 E-value=0.00016 Score=84.30 Aligned_cols=42 Identities=33% Similarity=0.465 Sum_probs=38.5
Q ss_pred ccceeeecCCccHHHHHHHHHHC-CCeEEEEeccCCCcccccCCCccce
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
++||+|||||++||+||++|.+. |++|+|+|+. +.+||.+..
T Consensus 12 ~~~v~IIGaGisGL~aA~~L~~~~g~~v~vlEa~------~rvGGr~~t 54 (496)
T PLN02576 12 SKDVAVVGAGVSGLAAAYALASKHGVNVLVTEAR------DRVGGNITS 54 (496)
T ss_pred CCCEEEECcCHHHHHHHHHHHHhcCCCEEEEecC------CCCCCceeE
Confidence 47899999999999999999999 9999999998 789998743
No 391
>PRK07233 hypothetical protein; Provisional
Probab=97.34 E-value=0.00016 Score=82.72 Aligned_cols=56 Identities=14% Similarity=0.121 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
..+.+.+.+.+++.|++++++++|++|+.+++.+.+... ++. .+.+|.||+|++..
T Consensus 198 ~~l~~~l~~~l~~~g~~v~~~~~V~~i~~~~~~~~~~~~--~~~------~~~ad~vI~a~p~~ 253 (434)
T PRK07233 198 ATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVEV--DGE------EEDFDAVISTAPPP 253 (434)
T ss_pred HHHHHHHHHHHHhcCceEEeCCCeeEEEEcCCceEEEEe--CCc------eEECCEEEECCCHH
Confidence 457788888899999999999999999987766544432 444 78999999999854
No 392
>PLN02568 polyamine oxidase
Probab=97.34 E-value=0.0002 Score=83.50 Aligned_cols=44 Identities=25% Similarity=0.432 Sum_probs=38.7
Q ss_pred cccccceeeecCCccHHHHHHHHHHCC-----CeEEEEeccCCCcccccCCCccc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLG-----FKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g-----~~V~liek~~~~~~~~~~GG~~~ 436 (866)
|.+.+||+|||||++||+||.+|++.| ++|+|+|++ ..+||.+.
T Consensus 2 ~~~~~~v~iiGaG~aGl~aa~~L~~~g~~~~~~~v~v~E~~------~~~GGr~~ 50 (539)
T PLN02568 2 VAKKPRIVIIGAGMAGLTAANKLYTSSAANDMFELTVVEGG------DRIGGRIN 50 (539)
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhcccccCCceEEEEeCC------CCcCCeEE
Confidence 445689999999999999999999887 899999998 67888764
No 393
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=97.34 E-value=0.0019 Score=72.68 Aligned_cols=100 Identities=20% Similarity=0.295 Sum_probs=79.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecC-CcCCCc------------------c----------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS-SNFLNT------------------V---------------------- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~-~~~l~~------------------~---------------------- 609 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++. +.+.+. .
T Consensus 3 ~dV~IvGaG~aGl~lA~~L~~~G~~V~l~E~~~~~~~~~~r~~~l~~~~~~~L~~lG~~~~i~~~~~~~~~~~~~~~~~~ 82 (387)
T COG0654 3 LDVAIVGAGPAGLALALALARAGLDVTLLERAPRELLERGRGIALSPNALRALERLGLWDRLEALGVPPLHVMVVDDGGR 82 (387)
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEccCccccccCceeeeecHhHHHHHHHcCChhhhhhccCCceeeEEEecCCc
Confidence 57999999999999999999999999999997 222110 0
Q ss_pred --------------------cHHHHHHHHHHHHHcC-CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEE
Q psy9583 610 --------------------DEEIAKKAFHLLNKQG-LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLL 668 (866)
Q Consensus 610 --------------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi 668 (866)
-.++...+.+.+.+.+ |+++.++.|+.++.+++.+.+++.. +|+ +++||++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~~~~~~~v~~~~~~~~~v~v~l~~-dG~------~~~a~llV 155 (387)
T COG0654 83 RLLIFDAAELGRGALGYVVPRSDLLNALLEAARALPNVTLRFGAEVEAVEQDGDGVTVTLSF-DGE------TLDADLLV 155 (387)
T ss_pred eeEEecccccCCCcceEEeEhHHHHHHHHHHHhhCCCcEEEcCceEEEEEEcCCceEEEEcC-CCc------EEecCEEE
Confidence 0334556667776665 9999999999999998888887765 675 89999999
Q ss_pred EeeccccCC
Q psy9583 669 IAIGRIPNT 677 (866)
Q Consensus 669 ~a~G~~p~~ 677 (866)
-|-|.....
T Consensus 156 gADG~~S~v 164 (387)
T COG0654 156 GADGANSAV 164 (387)
T ss_pred ECCCCchHH
Confidence 999976543
No 394
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end.
Probab=97.34 E-value=0.00016 Score=83.53 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=37.9
Q ss_pred cceeeecCCccHHHHHHHHHHC----CCeEEEEeccCCCcccccCCCccce
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL----GFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~----g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
+||+|||||++||+||+.|++. |++|+|+|+. +.+||.|..
T Consensus 3 ~~v~VIGaGiaGL~aA~~L~~~~~~~g~~v~vlE~~------~r~GG~~~t 47 (462)
T TIGR00562 3 KHVVIIGGGISGLCAAYYLEKEIPELPVELTLVEAS------DRVGGKIQT 47 (462)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCCCCCcEEEEEcC------CcCcceEEE
Confidence 7899999999999999999999 9999999998 789998743
No 395
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=97.33 E-value=0.0022 Score=72.63 Aligned_cols=98 Identities=17% Similarity=0.227 Sum_probs=74.6
Q ss_pred eEEEECCcHHHHHHHHHHHhcC--CcEEEEecCCcCCC------------------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLG--SEVTILEMSSNFLN------------------------------------------ 607 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g--~~Vtli~~~~~~l~------------------------------------------ 607 (866)
+|+|||||+.|+-+|..|++.| .+|+++++.+...+
T Consensus 3 dv~IvGaG~aGl~~A~~L~~~g~g~~v~liE~~~~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (403)
T PRK07333 3 DVVIAGGGYVGLALAVALKQAAPHLPVTVVDAAPAGAWSRDPRASAIAAAARRMLEALGVWDEIAPEAQPITDMVITDSR 82 (403)
T ss_pred CEEEECccHHHHHHHHHHhcCCCCCEEEEEeCCCcccCCCCcceEEecHHHHHHHHHCCChhhhhhhcCcccEEEEEeCC
Confidence 5899999999999999999985 89999987542100
Q ss_pred ----------cc---------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEE
Q psy9583 608 ----------TV---------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITS 662 (866)
Q Consensus 608 ----------~~---------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~ 662 (866)
.+ ...+.+.+.+.+.+.|++++.++++++++.+++.+.+.+. +|. ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~--~g~------~~ 154 (403)
T PRK07333 83 TSDPVRPVFLTFEGEVEPGEPFAHMVENRVLINALRKRAEALGIDLREATSVTDFETRDEGVTVTLS--DGS------VL 154 (403)
T ss_pred CCCCCccceEEecccccCCCccEEEeEhHHHHHHHHHHHHhCCCEEEcCCEEEEEEEcCCEEEEEEC--CCC------EE
Confidence 00 0223455556667789999999999999887777776664 555 78
Q ss_pred eccEEEEeeccccCC
Q psy9583 663 IFDKLLIAIGRIPNT 677 (866)
Q Consensus 663 ~~D~vi~a~G~~p~~ 677 (866)
.+|.||.|.|..+..
T Consensus 155 ~ad~vI~AdG~~S~v 169 (403)
T PRK07333 155 EARLLVAADGARSKL 169 (403)
T ss_pred EeCEEEEcCCCChHH
Confidence 999999999987653
No 396
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=97.33 E-value=0.00093 Score=76.76 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=64.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..|++.|.+|++|++.+ .+... .
T Consensus 170 k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~------~ll~~-----------------------------------~ 208 (452)
T TIGR03452 170 ESLVIVGGGYIAAEFAHVFSALGTRVTIVNRST------KLLRH-----------------------------------L 208 (452)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEEccC------ccccc-----------------------------------c
Confidence 579999999999999999999999999999862 11000 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..++.. .+...+ +.+++++.+..+. +.. ....+.+...+++++.+|.|++|+|.+|..
T Consensus 209 d~~~~~--------------~l~~~~-~~gI~i~~~~~V~~i~~---~~~~v~v~~~~g~~i~~D~vl~a~G~~pn~ 267 (452)
T TIGR03452 209 DEDISD--------------RFTEIA-KKKWDIRLGRNVTAVEQ---DGDGVTLTLDDGSTVTADVLLVATGRVPNG 267 (452)
T ss_pred CHHHHH--------------HHHHHH-hcCCEEEeCCEEEEEEE---cCCeEEEEEcCCCEEEcCEEEEeeccCcCC
Confidence 000000 011222 3578888776655 321 123355554556789999999999999874
No 397
>PRK01202 glycine cleavage system protein H; Provisional
Probab=97.32 E-value=0.00065 Score=62.63 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=47.6
Q ss_pred EEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeec---CCCEEe---cCC-EEEEEecC
Q psy9583 19 TLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT---DGSIVT---SNQ-VIALIDTD 80 (866)
Q Consensus 19 ~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~---~g~~v~---~g~-~l~~~~~~ 80 (866)
.-++| .++|++|++||+++.||++|+..+|.||.+|+|.++..+ ..+.+. -|+ -|+.+...
T Consensus 40 ~~v~l-p~~G~~v~~g~~~~~IEs~K~~~~i~sPvsG~Vv~vN~~l~~~p~~ln~~p~~~gWl~~v~~~ 107 (127)
T PRK01202 40 VFVEL-PEVGDEVKAGETFGVVESVKAASDIYAPVSGEVVEVNEALEDSPELVNEDPYGEGWLFKIKPS 107 (127)
T ss_pred eEEEc-CCCCCEecCCCEEEEEEEcceeeeeecCCCeEEEEEhHHhhhCcHhhcCCCCCCceEEEEEeC
Confidence 33454 367999999999999999999999999999999999544 334444 444 77777644
No 398
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.32 E-value=0.00087 Score=76.09 Aligned_cols=62 Identities=11% Similarity=0.126 Sum_probs=46.5
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
|..+.-.......++|-++...++|+.+..+++.+-+.+.+.. .++..++.++.||-|+|--
T Consensus 163 daRLv~~~a~~A~~~Ga~il~~~~v~~~~re~~v~gV~~~D~~---tg~~~~ira~~VVNAaGpW 224 (532)
T COG0578 163 DARLVAANARDAAEHGAEILTYTRVESLRREGGVWGVEVEDRE---TGETYEIRARAVVNAAGPW 224 (532)
T ss_pred hHHHHHHHHHHHHhcccchhhcceeeeeeecCCEEEEEEEecC---CCcEEEEEcCEEEECCCcc
Confidence 4456666677788899999999999999988874446655322 2236789999999999953
No 399
>PRK07588 hypothetical protein; Provisional
Probab=97.31 E-value=0.0024 Score=72.12 Aligned_cols=98 Identities=21% Similarity=0.384 Sum_probs=72.2
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------------------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------- 608 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------- 608 (866)
+|+|||||+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 2 ~V~IVGgG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~g~~~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~g~~~ 81 (391)
T PRK07588 2 KVAISGAGIAGPTLAYWLRRYGHEPTLIERAPELRTGGYMVDFWGVGYEVAKRMGITDQLREAGYQIEHVRSVDPTGRRK 81 (391)
T ss_pred eEEEECccHHHHHHHHHHHHCCCceEEEeCCCCccCCCeEEeccCcHHHHHHHcCCHHHHHhccCCccceEEEcCCCCEE
Confidence 6899999999999999999999999999876543110
Q ss_pred --cc-----------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEE
Q psy9583 609 --VD-----------------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLI 669 (866)
Q Consensus 609 --~d-----------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~ 669 (866)
++ .++...+.+.+ ..|+++++++++++++.+++++.+.+. +|. .+.+|.||.
T Consensus 82 ~~~~~~~~~~~~g~~~~~i~r~~l~~~L~~~~-~~~v~i~~~~~v~~i~~~~~~v~v~~~--~g~------~~~~d~vIg 152 (391)
T PRK07588 82 ADLNVDSFRRMVGDDFTSLPRGDLAAAIYTAI-DGQVETIFDDSIATIDEHRDGVRVTFE--RGT------PRDFDLVIG 152 (391)
T ss_pred EEecHHHccccCCCceEEEEHHHHHHHHHHhh-hcCeEEEeCCEEeEEEECCCeEEEEEC--CCC------EEEeCEEEE
Confidence 00 00111222222 347999999999999988877777665 665 678999999
Q ss_pred eeccccCCC
Q psy9583 670 AIGRIPNTN 678 (866)
Q Consensus 670 a~G~~p~~~ 678 (866)
|.|......
T Consensus 153 ADG~~S~vR 161 (391)
T PRK07588 153 ADGLHSHVR 161 (391)
T ss_pred CCCCCccch
Confidence 999876553
No 400
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=97.30 E-value=0.0014 Score=74.47 Aligned_cols=99 Identities=16% Similarity=0.292 Sum_probs=73.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc----------CCC---ccc---------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN----------FLN---TVD--------------------------- 610 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~----------~l~---~~d--------------------------- 610 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++.+. +.+ .+.
T Consensus 3 ~dV~IVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~~~~~r~~~l~~~~~~~L~~lGl~~~l~~~~~~~~~~~ 82 (405)
T PRK05714 3 ADLLIVGAGMVGSALALALQGSGLEVLLLDGGPLSVKPFDPQAPFEPRVSALSAASQRILERLGAWDGIAARRASPYSEM 82 (405)
T ss_pred ccEEEECccHHHHHHHHHHhcCCCEEEEEcCCCccccccccCCCCCccchhhhHHHHHHHHHCChhhhhhHhhCccceeE
Confidence 3699999999999999999999999999998651 000 000
Q ss_pred -----------------------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEE
Q psy9583 611 -----------------------------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661 (866)
Q Consensus 611 -----------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~ 661 (866)
..+.+.+.+.+++.|++++.++++++++.+++++.+.+. +|. +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~--~g~------~ 154 (405)
T PRK05714 83 QVWDGSGTGQIHFSAASVHAEVLGHIVENRVVQDALLERLHDSDIGLLANARLEQMRRSGDDWLLTLA--DGR------Q 154 (405)
T ss_pred EEEcCCCCceEEecccccCCCccEEEEEhHHHHHHHHHHHhcCCCEEEcCCEEEEEEEcCCeEEEEEC--CCC------E
Confidence 011223344556678999999999999888777777664 555 7
Q ss_pred EeccEEEEeeccccCC
Q psy9583 662 SIFDKLLIAIGRIPNT 677 (866)
Q Consensus 662 ~~~D~vi~a~G~~p~~ 677 (866)
+.+|.||.|.|.....
T Consensus 155 ~~a~~vVgAdG~~S~v 170 (405)
T PRK05714 155 LRAPLVVAADGANSAV 170 (405)
T ss_pred EEeCEEEEecCCCchh
Confidence 9999999999986644
No 401
>PRK09783 copper/silver efflux system membrane fusion protein CusB; Provisional
Probab=97.30 E-value=0.00086 Score=75.60 Aligned_cols=66 Identities=21% Similarity=0.294 Sum_probs=58.0
Q ss_pred CeEEEEEEE-eCCCCeeeCCCeEEEEEec------------------------------------------------cee
Q psy9583 16 SEATLLNWH-KKEGELVVRNENLIDIETD------------------------------------------------KVI 46 (866)
Q Consensus 16 ~~g~i~~w~-~~~G~~v~~g~~l~~ve~~------------------------------------------------k~~ 46 (866)
.+|.|.+.+ +++||.|++||+|+++++. ...
T Consensus 130 v~G~V~~l~~~~~Gd~VkkGq~La~l~spel~~aq~e~~~~~~~~~~~~~~~~~~~rl~~~~i~~~~i~~l~~~~~~~~~ 209 (409)
T PRK09783 130 AAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATRKIQTR 209 (409)
T ss_pred cCEEEEEEEecCCCCEECCCCEEEEEeCHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCc
Confidence 469999998 9999999999999999831 013
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
..|.||++|+|.+..+.+|+.|..|++|+.|....
T Consensus 210 ~~I~AP~dGvV~~~~v~~G~~V~~g~~L~~I~d~~ 244 (409)
T PRK09783 210 FTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMD 244 (409)
T ss_pred EEEECCCCeEEEEEECCCCCEECCCCeEEEEEcCC
Confidence 57999999999999999999999999999997544
No 402
>PTZ00052 thioredoxin reductase; Provisional
Probab=97.29 E-value=0.0013 Score=76.54 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=66.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..|++.|.+|+|+++. ..+.. +
T Consensus 183 ~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~------~~l~~-------------------------------~----- 220 (499)
T PTZ00052 183 GKTLIVGASYIGLETAGFLNELGFDVTVAVRS------IPLRG-------------------------------F----- 220 (499)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC------ccccc-------------------------------C-----
Confidence 47999999999999999999999999999863 10000 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
+.+. ...+...+++.||+++.+..+. +.. ....+.+...+++++.+|.|++|+|..|..
T Consensus 221 d~~~--------------~~~l~~~l~~~GV~i~~~~~v~~v~~---~~~~~~v~~~~g~~i~~D~vl~a~G~~pn~ 280 (499)
T PTZ00052 221 DRQC--------------SEKVVEYMKEQGTLFLEGVVPINIEK---MDDKIKVLFSDGTTELFDTVLYATGRKPDI 280 (499)
T ss_pred CHHH--------------HHHHHHHHHHcCCEEEcCCeEEEEEE---cCCeEEEEECCCCEEEcCEEEEeeCCCCCc
Confidence 0000 1113445778899999887654 321 112334444456779999999999999873
No 403
>PLN02268 probable polyamine oxidase
Probab=97.28 E-value=0.00022 Score=81.76 Aligned_cols=40 Identities=33% Similarity=0.473 Sum_probs=36.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
.+|+|||||.|||+||+.|.+.|++|+|+|+. +++||.+.
T Consensus 1 ~~VvVIGaGisGL~aA~~L~~~g~~v~vlEa~------~r~GGri~ 40 (435)
T PLN02268 1 PSVIVIGGGIAGIAAARALHDASFKVTLLESR------DRIGGRVH 40 (435)
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC------CCCCceee
Confidence 36999999999999999999999999999998 78999763
No 404
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=97.28 E-value=0.0013 Score=75.42 Aligned_cols=97 Identities=12% Similarity=0.225 Sum_probs=67.0
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||+|+.|+..|..|++.|.+|+|+++.+ .+. |.
T Consensus 159 ~~v~ViGgG~~g~E~A~~l~~~g~~Vtli~~~~------~~l---------~~--------------------------- 196 (441)
T PRK08010 159 GHLGILGGGYIGVEFASMFANFGSKVTILEAAS------LFL---------PR--------------------------- 196 (441)
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEecCC------CCC---------CC---------------------------
Confidence 579999999999999999999999999999862 110 00
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.+ . .+...+...+++.||+++.+..+. +.. ....+.+..+++ ++.+|.|++|+|..|..
T Consensus 197 -~~-~-----------~~~~~l~~~l~~~gV~v~~~~~v~~i~~---~~~~v~v~~~~g-~i~~D~vl~a~G~~pn~ 256 (441)
T PRK08010 197 -ED-R-----------DIADNIATILRDQGVDIILNAHVERISH---HENQVQVHSEHA-QLAVDALLIASGRQPAT 256 (441)
T ss_pred -cC-H-----------HHHHHHHHHHHhCCCEEEeCCEEEEEEE---cCCEEEEEEcCC-eEEeCEEEEeecCCcCC
Confidence 00 0 001113445778899999887655 322 223455554444 58999999999999874
No 405
>KOG2614|consensus
Probab=97.28 E-value=0.0017 Score=70.24 Aligned_cols=34 Identities=18% Similarity=0.440 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+.+|+|||||.+|+++|..|.++|++|+|+|+..
T Consensus 2 ~~~VvIvGgGI~Gla~A~~l~r~G~~v~VlE~~e 35 (420)
T KOG2614|consen 2 EPKVVIVGGGIVGLATALALHRKGIDVVVLESRE 35 (420)
T ss_pred CCcEEEECCcHHHHHHHHHHHHcCCeEEEEeecc
Confidence 3689999999999999999999999999999974
No 406
>PLN02852 ferredoxin-NADP+ reductase
Probab=97.26 E-value=0.00097 Score=76.24 Aligned_cols=91 Identities=14% Similarity=0.303 Sum_probs=66.0
Q ss_pred CCCeEEEECCcHHHHHHHHHHHh--cCCcEEEEecCCcCCCc----------ccHHHHHHHHHHHHHcCCEEEeCceEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRR--LGSEVTILEMSSNFLNT----------VDEEIAKKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~--~g~~Vtli~~~~~~l~~----------~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
.+++|+|||+|+.|+.+|..|.+ .|.+|+++++.+.+... ....+...+.+.+...+|+++.+..+-.
T Consensus 25 ~~~~VaIVGaGPAGl~AA~~L~~~~~g~~Vtv~E~~p~pgGlvr~gvaP~~~~~k~v~~~~~~~~~~~~v~~~~nv~vg~ 104 (491)
T PLN02852 25 EPLHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGR 104 (491)
T ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCeEEEEecCCCCcceEeeccCCCcchhHHHHHHHHHHHHHCCeEEEcCEEECc
Confidence 46899999999999999999987 79999999998876421 1123444566677888999988766521
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+++. +- ...+|.||+|+|..+.
T Consensus 105 --------dvtl~--~L-------~~~yDaVIlAtGa~~~ 127 (491)
T PLN02852 105 --------DVSLS--EL-------RDLYHVVVLAYGAESD 127 (491)
T ss_pred --------cccHH--HH-------hhhCCEEEEecCCCCC
Confidence 12222 11 3468999999998764
No 407
>TIGR02734 crtI_fam phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger Pfam family pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis.
Probab=97.25 E-value=0.00021 Score=83.42 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
..+.+.+.+.+++.|+++++++.|++|..+++.+ .+.+ .+|. ++.+|.||++++..
T Consensus 219 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~V~~--~~g~------~~~ad~VI~a~~~~ 275 (502)
T TIGR02734 219 GALVAAMAKLAEDLGGELRLNAEVIRIETEGGRATAVHL--ADGE------RLDADAVVSNADLH 275 (502)
T ss_pred HHHHHHHHHHHHHCCCEEEECCeEEEEEeeCCEEEEEEE--CCCC------EEECCEEEECCcHH
Confidence 5678888899999999999999999998766553 3433 3555 78999999998864
No 408
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.25 E-value=0.0015 Score=75.30 Aligned_cols=100 Identities=19% Similarity=0.292 Sum_probs=65.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..+++.|.+|+|||+.+ .+. |. .
T Consensus 175 ~~vvIIGgG~ig~E~A~~l~~~G~~Vtlie~~~------~il---------~~---------------------~----- 213 (466)
T PRK06115 175 KHLVVIGAGVIGLELGSVWRRLGAQVTVVEYLD------RIC---------PG---------------------T----- 213 (466)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCC------CCC---------CC---------------------C-----
Confidence 679999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-C--CceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-K--TKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~--~g~~i~~d~lViATGs~p~~ 546 (866)
..+. ...+...+++.||+++.++.+. +.. +.+...+.+.. . ++..+.+|.|++|+|..|..
T Consensus 214 d~~~--------------~~~l~~~l~~~gV~i~~~~~V~~i~~-~~~~v~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~ 278 (466)
T PRK06115 214 DTET--------------AKTLQKALTKQGMKFKLGSKVTGATA-GADGVSLTLEPAAGGAAETLQADYVLVAIGRRPYT 278 (466)
T ss_pred CHHH--------------HHHHHHHHHhcCCEEEECcEEEEEEE-cCCeEEEEEEEcCCCceeEEEeCEEEEccCCcccc
Confidence 0000 0112345677899999887665 321 11112233332 1 23679999999999998863
No 409
>PRK05868 hypothetical protein; Validated
Probab=97.24 E-value=0.0031 Score=70.57 Aligned_cols=99 Identities=19% Similarity=0.300 Sum_probs=72.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---cc--c-------------HHH-------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---TV--D-------------EEI------------------- 613 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---~~--d-------------~~~------------------- 613 (866)
++|+|||||+.|+-+|..|++.|.+|+++++.+.+.. .. . +.+
T Consensus 2 ~~V~IvGgG~aGl~~A~~L~~~G~~v~viE~~~~~~~~g~~i~~~~~a~~~L~~lGl~~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
T PRK05868 2 KTVVVSGASVAGTAAAYWLGRHGYSVTMVERHPGLRPGGQAIDVRGPALDVLERMGLLAAAQEHKTRIRGASFVDRDGNE 81 (372)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCceeeeeCchHHHHHHhcCCHHHHHhhccCccceEEEeCCCCE
Confidence 4799999999999999999999999999987654311 00 0 000
Q ss_pred ----------------------HHHHHHHHH---HcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEE
Q psy9583 614 ----------------------AKKAFHLLN---KQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLL 668 (866)
Q Consensus 614 ----------------------~~~l~~~l~---~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi 668 (866)
...+.+.|. ..|+++++++++++++.+++++.+++. +|. ++.+|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~R~~L~~~l~~~~~~~v~i~~~~~v~~i~~~~~~v~v~~~--dg~------~~~adlvI 153 (372)
T PRK05868 82 LFRDTESTPTGGPVNSPDIELLRDDLVELLYGATQPSVEYLFDDSISTLQDDGDSVRVTFE--RAA------AREFDLVI 153 (372)
T ss_pred EeecccccccCCCCCCceEEEEHHHHHHHHHHhccCCcEEEeCCEEEEEEecCCeEEEEEC--CCC------eEEeCEEE
Confidence 112223332 357899999999999877777777775 565 78999999
Q ss_pred EeeccccCC
Q psy9583 669 IAIGRIPNT 677 (866)
Q Consensus 669 ~a~G~~p~~ 677 (866)
-|-|.+...
T Consensus 154 gADG~~S~v 162 (372)
T PRK05868 154 GADGLHSNV 162 (372)
T ss_pred ECCCCCchH
Confidence 999987655
No 410
>PRK06475 salicylate hydroxylase; Provisional
Probab=97.24 E-value=0.0036 Score=70.89 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=74.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 608 (866)
++|+|||||+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 3 ~~V~IvGgGiaGl~~A~~L~~~G~~V~i~E~~~~~~~~g~gi~l~~~~~~~L~~~Gl~~~l~~~~~~~~~~~~~~g~~~~ 82 (400)
T PRK06475 3 GSPLIAGAGVAGLSAALELAARGWAVTIIEKAQELSEVGAGLQLAPNAMRHLERLGVADRLSGTGVTPKALYLMDGRKAR 82 (400)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEecCCccCcCCccceeChhHHHHHHHCCChHHHhhcccCcceEEEecCCCcc
Confidence 68999999999999999999999999999876532100
Q ss_pred --c--------------------cHHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEecc
Q psy9583 609 --V--------------------DEEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFD 665 (866)
Q Consensus 609 --~--------------------d~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D 665 (866)
+ -.++.+.+.+.+.+ .|+++++++++++++.+++++.+++...++. ..+.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~i~v~~~~~v~~~~~~~~~v~v~~~~~~~~-----~~~~ad 157 (400)
T PRK06475 83 PLLAMQLGDLARKRWHHPYIVCHRADLQSALLDACRNNPGIEIKLGAEMTSQRQTGNSITATIIRTNSV-----ETVSAA 157 (400)
T ss_pred eEEEecchhhhhhcCCCCceeECHHHHHHHHHHHHHhcCCcEEEECCEEEEEecCCCceEEEEEeCCCC-----cEEecC
Confidence 0 01122333344444 4799999999999988777887777543332 368999
Q ss_pred EEEEeeccccCC
Q psy9583 666 KLLIAIGRIPNT 677 (866)
Q Consensus 666 ~vi~a~G~~p~~ 677 (866)
+||-|-|.....
T Consensus 158 lvIgADG~~S~v 169 (400)
T PRK06475 158 YLIACDGVWSML 169 (400)
T ss_pred EEEECCCccHhH
Confidence 999999987644
No 411
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [].
Probab=97.23 E-value=0.0027 Score=70.78 Aligned_cols=95 Identities=20% Similarity=0.224 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCCcCCC---cccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC--C-eE--EEEEeeC
Q psy9583 580 VIGLEIGSIWRRLGSEVTILEMSSNFLN---TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINK--E-NV--LINYSNK 651 (866)
Q Consensus 580 ~~glE~A~~l~~~g~~Vtli~~~~~~l~---~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~-~~--~v~~~~~ 651 (866)
.+++|+-.+|.++=.++.=+..-..+.. .--+.+...+.+.|+++||+|+++++|+.+.-+. + .. .+.+. .
T Consensus 173 hSa~E~rRyl~Rf~h~~~~l~~l~~l~~T~YNQyeSii~Pl~~~L~~~GV~F~~~t~V~di~~~~~~~~~~~~~i~~~-~ 251 (500)
T PF06100_consen 173 HSAVEFRRYLHRFIHEIPGLNDLSGLDRTKYNQYESIILPLIRYLKSQGVDFRFNTKVTDIDFDITGDKKTATRIHIE-Q 251 (500)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCccccccCccccHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEccCCCeeEEEEEEE-c
Confidence 5789999888887333221111111111 1235677889999999999999999999987642 2 11 23333 2
Q ss_pred CCCccceeEEEeccEEEEeeccccC
Q psy9583 652 STNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 652 ~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
+|.. .....-+-|.|++..|..-.
T Consensus 252 ~g~~-~~i~l~~~DlV~vT~GS~t~ 275 (500)
T PF06100_consen 252 DGKE-ETIDLGPDDLVFVTNGSMTE 275 (500)
T ss_pred CCCe-eEEEeCCCCEEEEECCcccc
Confidence 3331 11112245788888886543
No 412
>PRK12831 putative oxidoreductase; Provisional
Probab=97.23 E-value=0.00074 Score=77.63 Aligned_cols=94 Identities=24% Similarity=0.353 Sum_probs=68.4
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------Cc--ccH-HHHHHHHHHHHHcCCEEEeCceEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------NT--VDE-EIAKKAFHLLNKQGLNIILNTKIHDIK 638 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~~--~d~-~~~~~l~~~l~~~GV~i~~~~~v~~i~ 638 (866)
.+++|+|||+|+.|+.+|..|+++|.+|+++++.+.+. +. ++. ++.....+.+++.|+++++++.+..
T Consensus 139 ~~~~V~IIG~GpAGl~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~~gv~i~~~~~v~~-- 216 (464)
T PRK12831 139 KGKKVAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGVLVYGIPEFRLPKETVVKKEIENIKKLGVKIETNVVVGK-- 216 (464)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEecCCCCCCeeeecCCCccCCccHHHHHHHHHHHHcCCEEEcCCEECC--
Confidence 46899999999999999999999999999999876532 11 222 3666667788899999999986621
Q ss_pred EcCCeEEEEEeeCCCCccceeEEEeccEEEEeecc-ccCC
Q psy9583 639 INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR-IPNT 677 (866)
Q Consensus 639 ~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~-~p~~ 677 (866)
.+.+. +.. ..+.+|.|++|+|. .|..
T Consensus 217 ------~v~~~--~~~-----~~~~~d~viiAtGa~~~~~ 243 (464)
T PRK12831 217 ------TVTID--ELL-----EEEGFDAVFIGSGAGLPKF 243 (464)
T ss_pred ------cCCHH--HHH-----hccCCCEEEEeCCCCCCCC
Confidence 11221 111 13568999999997 5654
No 413
>KOG2495|consensus
Probab=97.21 E-value=0.0012 Score=71.06 Aligned_cols=96 Identities=22% Similarity=0.284 Sum_probs=69.1
Q ss_pred cceeeecCCccHHHHHHHHHHC--------------CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHH
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--------------GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENV 456 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--------------g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~ 456 (866)
-.+|||||||.|...|.+|+.. ..+|+|+|..+ . ....
T Consensus 219 Lh~VVVGGGPTGVEFAaEL~Dfi~~Dl~k~yp~l~~~i~vtLiEA~d------~---------------------iL~m- 270 (491)
T KOG2495|consen 219 LHFVVVGGGPTGVEFAAELADFIPEDLRKIYPELKKDIKVTLIEAAD------H---------------------ILNM- 270 (491)
T ss_pred EEEEEECCCCcceeehHHHHHHHHHHHHHhhhcchhheEEEeeccch------h---------------------HHHH-
Confidence 5799999999999999999843 35788998751 0 0000
Q ss_pred hhhhhhcCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc--eEEEe
Q psy9583 457 KNSFFEYGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK--ETITA 533 (866)
Q Consensus 457 ~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g--~~i~~ 533 (866)
+-+++....+..+.+.+|++..++.+. +.. ..+.+.+.+| +.++|
T Consensus 271 ---------------------------Fdkrl~~yae~~f~~~~I~~~~~t~Vk~V~~-----~~I~~~~~~g~~~~iPY 318 (491)
T KOG2495|consen 271 ---------------------------FDKRLVEYAENQFVRDGIDLDTGTMVKKVTE-----KTIHAKTKDGEIEEIPY 318 (491)
T ss_pred ---------------------------HHHHHHHHHHHHhhhccceeecccEEEeecC-----cEEEEEcCCCceeeecc
Confidence 011223335667888999999998776 444 6677766555 78999
Q ss_pred cEEEEecCCCCcC
Q psy9583 534 KYIIIATGSKARS 546 (866)
Q Consensus 534 d~lViATGs~p~~ 546 (866)
--||.|||..|+.
T Consensus 319 G~lVWatG~~~rp 331 (491)
T KOG2495|consen 319 GLLVWATGNGPRP 331 (491)
T ss_pred eEEEecCCCCCch
Confidence 9999999988773
No 414
>PRK14727 putative mercuric reductase; Provisional
Probab=97.20 E-value=0.0019 Score=74.79 Aligned_cols=96 Identities=16% Similarity=0.165 Sum_probs=66.0
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..|++.|.+|+|+++. ..+ |.
T Consensus 189 k~vvVIGgG~iG~E~A~~l~~~G~~Vtlv~~~------~~l----------~~--------------------------- 225 (479)
T PRK14727 189 ASLTVIGSSVVAAEIAQAYARLGSRVTILARS------TLL----------FR--------------------------- 225 (479)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEcC------CCC----------Cc---------------------------
Confidence 57999999999999999999999999999864 111 00
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.+ . .+...+...+++.||+++.+..+. +.. ....+.+..+++ ++.+|.+|+|+|..|..
T Consensus 226 -~d--~----------~~~~~l~~~L~~~GV~i~~~~~V~~i~~---~~~~~~v~~~~g-~i~aD~VlvA~G~~pn~ 285 (479)
T PRK14727 226 -ED--P----------LLGETLTACFEKEGIEVLNNTQASLVEH---DDNGFVLTTGHG-ELRAEKLLISTGRHANT 285 (479)
T ss_pred -ch--H----------HHHHHHHHHHHhCCCEEEcCcEEEEEEE---eCCEEEEEEcCC-eEEeCEEEEccCCCCCc
Confidence 00 0 001123445778899999887665 321 123455554444 58999999999999874
No 415
>PRK13748 putative mercuric reductase; Provisional
Probab=97.20 E-value=0.0018 Score=76.81 Aligned_cols=96 Identities=15% Similarity=0.155 Sum_probs=66.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+||++. ..+ |. .
T Consensus 271 ~~vvViGgG~ig~E~A~~l~~~g~~Vtli~~~------~~l----------~~--------------------------~ 308 (561)
T PRK13748 271 ERLAVIGSSVVALELAQAFARLGSKVTILARS------TLF----------FR--------------------------E 308 (561)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecC------ccc----------cc--------------------------c
Confidence 57999999999999999999999999999874 111 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
+.++ ...+...+++.||+++.+..+. +.. ....+.+..+++ .+.+|.|++|+|..|..
T Consensus 309 d~~~--------------~~~l~~~l~~~gI~i~~~~~v~~i~~---~~~~~~v~~~~~-~i~~D~vi~a~G~~pn~ 367 (561)
T PRK13748 309 DPAI--------------GEAVTAAFRAEGIEVLEHTQASQVAH---VDGEFVLTTGHG-ELRADKLLVATGRAPNT 367 (561)
T ss_pred CHHH--------------HHHHHHHHHHCCCEEEcCCEEEEEEe---cCCEEEEEecCC-eEEeCEEEEccCCCcCC
Confidence 0000 1113445678899999887665 321 223455544444 69999999999999874
No 416
>KOG2311|consensus
Probab=97.19 E-value=0.0013 Score=71.56 Aligned_cols=33 Identities=36% Similarity=0.573 Sum_probs=31.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.|||||||||.||+.||..+++.|.+.+|+..+
T Consensus 28 ~~dVvVIGgGHAG~EAAaAaaR~Ga~TlLlT~~ 60 (679)
T KOG2311|consen 28 TYDVVVIGGGHAGCEAAAAAARLGARTLLLTHN 60 (679)
T ss_pred cccEEEECCCccchHHHHHHHhcCCceEEeecc
Confidence 699999999999999999999999999999875
No 417
>KOG1399|consensus
Probab=97.18 E-value=0.0071 Score=68.20 Aligned_cols=141 Identities=21% Similarity=0.274 Sum_probs=94.0
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc----------------------------------------
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT---------------------------------------- 608 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~---------------------------------------- 608 (866)
..++++|||+|++|+-.|..|.+.|.++++++|.+.+...
T Consensus 5 ~~~~vaIIGAG~sGL~~ar~l~~~g~~v~vfEr~~~iGGlW~y~~~~~~~~ss~Y~~l~tn~pKe~~~~~dfpf~~~~~~ 84 (448)
T KOG1399|consen 5 MSKDVAVIGAGPAGLAAARELLREGHEVVVFERTDDIGGLWKYTENVEVVHSSVYKSLRTNLPKEMMGYSDFPFPERDPR 84 (448)
T ss_pred CCCceEEECcchHHHHHHHHHHHCCCCceEEEecCCccceEeecCcccccccchhhhhhccCChhhhcCCCCCCcccCcc
Confidence 3689999999999999999999999999999987654210
Q ss_pred --cc-HHHHHHHHHHHHHcCC--EEEeCceEEEEEEcC-CeEEEEEeeCCCCccceeEEEeccEEEEeeccc--cCCCCC
Q psy9583 609 --VD-EEIAKKAFHLLNKQGL--NIILNTKIHDIKINK-ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI--PNTNNL 680 (866)
Q Consensus 609 --~d-~~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~-~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~--p~~~~l 680 (866)
.+ .++.++++...+.-++ .+.+++.+.++.... +.+.+......+. .....+|.|++|+|.- |+.+..
T Consensus 85 ~~p~~~e~~~YL~~yA~~F~l~~~i~f~~~v~~v~~~~~gkW~V~~~~~~~~----~~~~ifd~VvVctGh~~~P~~P~~ 160 (448)
T KOG1399|consen 85 YFPSHREVLEYLRDYAKHFDLLKMINFNTEVVRVDSIDKGKWRVTTKDNGTQ----IEEEIFDAVVVCTGHYVEPRIPQI 160 (448)
T ss_pred cCCCHHHHHHHHHHHHHhcChhhheEecccEEEEeeccCCceeEEEecCCcc----eeEEEeeEEEEcccCcCCCCCCcC
Confidence 01 2556666666666665 577889888888877 6788877643331 2478899999999976 555442
Q ss_pred CccccCeeecCCCcEE-eCCCCCC---CCCCEEEecccCC
Q psy9583 681 NIDKIGLKVNENNFII-VNDNCET---NIPNIYAIGDVVR 716 (866)
Q Consensus 681 ~l~~~gl~~~~~G~i~-Vd~~l~T---s~~~VyA~GD~a~ 716 (866)
+..+++.= .|.+. .-++... ..+.|-.+|--.+
T Consensus 161 --~g~~~~~f-~G~~iHS~~Yk~~e~f~~k~VlVIG~g~S 197 (448)
T KOG1399|consen 161 --PGPGIESF-KGKIIHSHDYKSPEKFRDKVVLVVGCGNS 197 (448)
T ss_pred --CCCchhhc-CCcceehhhccCcccccCceEEEECCCcc
Confidence 22122111 23222 2222221 3477888985443
No 418
>PTZ00058 glutathione reductase; Provisional
Probab=97.18 E-value=0.0021 Score=75.28 Aligned_cols=98 Identities=14% Similarity=0.098 Sum_probs=65.8
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..+++.|.+|+++++.+ .+. |. +
T Consensus 238 k~VvIIGgG~iGlE~A~~l~~~G~~Vtli~~~~------~il---------~~---------------------~----- 276 (561)
T PTZ00058 238 KRIGIAGSGYIAVELINVVNRLGAESYIFARGN------RLL---------RK---------------------F----- 276 (561)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCcEEEEEecc------ccc---------cc---------------------C-----
Confidence 679999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCceEEEecEEEEecCCCCc
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g~~i~~d~lViATGs~p~ 545 (866)
+.+. ...+...+++.||+++.+..+. +.. + ....+.+.. +++.++.+|.|++|+|..|.
T Consensus 277 d~~i--------------~~~l~~~L~~~GV~i~~~~~V~~I~~-~-~~~~v~v~~~~~~~~i~aD~VlvA~Gr~Pn 337 (561)
T PTZ00058 277 DETI--------------INELENDMKKNNINIITHANVEEIEK-V-KEKNLTIYLSDGRKYEHFDYVIYCVGRSPN 337 (561)
T ss_pred CHHH--------------HHHHHHHHHHCCCEEEeCCEEEEEEe-c-CCCcEEEEECCCCEEEECCEEEECcCCCCC
Confidence 0000 0112345677899999887655 321 1 112233332 33467999999999998887
No 419
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Probab=97.18 E-value=0.0013 Score=75.99 Aligned_cols=89 Identities=27% Similarity=0.452 Sum_probs=69.2
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------C--cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------N--TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++++|||+|+.|+.+|..|++.|.+|+++++.+++. + .++.++.....+.+++.||++++++.+..-
T Consensus 142 ~~~~V~IIGaG~aGl~aA~~L~~~g~~V~v~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~-- 219 (485)
T TIGR01317 142 TGKKVAVVGSGPAGLAAADQLNRAGHTVTVFEREDRCGGLLMYGIPNMKLDKAIVDRRIDLLSAEGIDFVTNTEIGVD-- 219 (485)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCCCceeeccCCCccCCHHHHHHHHHHHHhCCCEEECCCEeCCc--
Confidence 35799999999999999999999999999999887652 2 235667777778889999999999887310
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
+.. +. ....+|.|++|+|..
T Consensus 220 ------~~~---~~------~~~~~d~VilAtGa~ 239 (485)
T TIGR01317 220 ------ISA---DE------LKEQFDAVVLAGGAT 239 (485)
T ss_pred ------cCH---HH------HHhhCCEEEEccCCC
Confidence 100 11 135689999999987
No 420
>PRK10559 p-hydroxybenzoic acid efflux subunit AaeA; Provisional
Probab=97.18 E-value=0.0009 Score=72.51 Aligned_cols=65 Identities=15% Similarity=0.294 Sum_probs=57.4
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecc---------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDK--------------------------------------------------- 44 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k--------------------------------------------------- 44 (866)
..|+|.+++|++||.|++||+|+++++..
T Consensus 54 v~G~V~~v~V~~Gd~VkkGqvLa~Ld~~~~~~~l~~a~a~l~~~~a~~~~~~~~~~r~~~L~~~aiS~~~~d~a~~~~~~ 133 (310)
T PRK10559 54 VSGLITQVNVHDNQLVKKGQVLFTIDQPRYQKALAEAEADVAYYQVLAQEKRREAGRRNRLGVQAMSREEIDQANNVLQT 133 (310)
T ss_pred CceEEEEEEeCCcCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Confidence 56999999999999999999999998621
Q ss_pred -------------------eeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 45 -------------------VILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 45 -------------------~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
....|.||++|+|.++.+++|+.|.+|++|+.+...
T Consensus 134 a~a~l~~a~a~l~~a~~~l~~~~I~AP~dGvV~~~~~~~G~~V~~g~~l~~Iv~~ 188 (310)
T PRK10559 134 VLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQ 188 (310)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEEECCCCeEEEeEecCCCCEecCCCeeEEEEeC
Confidence 024699999999999999999999999999988654
No 421
>TIGR00998 8a0101 efflux pump membrane protein (multidrug resistance protein A).
Probab=97.18 E-value=0.001 Score=73.33 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=32.2
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
..|.||.+|+|..+.+++|+.|..|++|+.|....
T Consensus 205 ~~I~AP~~G~V~~~~~~~G~~v~~g~~l~~i~~~~ 239 (334)
T TIGR00998 205 TVIRAPFDGYVARRFVQVGQVVSPGQPLMAVVPAE 239 (334)
T ss_pred cEEEcCCCcEEEEEecCCCCEeCCCCeeEEEEcCC
Confidence 47999999999999999999999999999998653
No 422
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=97.17 E-value=0.0015 Score=75.48 Aligned_cols=90 Identities=20% Similarity=0.440 Sum_probs=68.8
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .++.++.....+.+.+.|+++++++.+..
T Consensus 142 ~~~~VvIIGaGpAGl~aA~~l~~~G~~V~vie~~~~~GG~l~~gip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 218 (471)
T PRK12810 142 TGKKVAVVGSGPAGLAAADQLARAGHKVTVFERADRIGGLLRYGIPDFKLEKEVIDRRIELMEAEGIEFRTNVEVGK--- 218 (471)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCceeeecCCcccCCHHHHHHHHHHHHhCCcEEEeCCEECC---
Confidence 467999999999999999999999999999999876532 23556666677788999999999987631
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
. +.. +. ....+|.|++|+|..+
T Consensus 219 -~----~~~---~~------~~~~~d~vvlAtGa~~ 240 (471)
T PRK12810 219 -D----ITA---EE------LLAEYDAVFLGTGAYK 240 (471)
T ss_pred -c----CCH---HH------HHhhCCEEEEecCCCC
Confidence 0 111 11 1346899999999973
No 423
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Probab=97.17 E-value=0.0011 Score=82.98 Aligned_cols=94 Identities=21% Similarity=0.284 Sum_probs=70.4
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .++.++.....+.+++.||++++++.+.
T Consensus 429 ~~~kVaIIG~GPAGLsaA~~La~~G~~VtV~E~~~~~GG~l~~gip~~rl~~e~~~~~~~~l~~~Gv~~~~~~~vg---- 504 (1006)
T PRK12775 429 KLGKVAICGSGPAGLAAAADLVKYGVDVTVYEALHVVGGVLQYGIPSFRLPRDIIDREVQRLVDIGVKIETNKVIG---- 504 (1006)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCcceeeccCCccCCCHHHHHHHHHHHHHCCCEEEeCCccC----
Confidence 368999999999999999999999999999998775521 2367788888889999999999987541
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc-cCC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI-PNT 677 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~-p~~ 677 (866)
.. +++..-. ....+|.||+|||.. |..
T Consensus 505 --~~--~~~~~l~-------~~~~yDaViIATGa~~pr~ 532 (1006)
T PRK12775 505 --KT--FTVPQLM-------NDKGFDAVFLGVGAGAPTF 532 (1006)
T ss_pred --Cc--cCHHHHh-------hccCCCEEEEecCCCCCCC
Confidence 11 1221000 023589999999984 544
No 424
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional
Probab=97.16 E-value=0.0042 Score=70.01 Aligned_cols=98 Identities=13% Similarity=0.198 Sum_probs=73.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------------------cc--------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------------------TV-------------------- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------------------~~-------------------- 609 (866)
-+|+|||||+.|+-+|..|++.|.+|+++++.+.... .+
T Consensus 6 ~dv~IvGgG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~r~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 85 (388)
T PRK07608 6 FDVVVVGGGLVGASLALALAQSGLRVALLAPRAPPRPADDAWDSRVYAISPSSQAFLERLGVWQALDAARLAPVYDMRVF 85 (388)
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCeEEEEecCCCccccCCCCCCceEeecHHHHHHHHHcCchhhhhhhcCCcceEEEEE
Confidence 4699999999999999999999999999998755311 00
Q ss_pred ------------------------cHHHHHHHHHHHHHcC-CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEec
Q psy9583 610 ------------------------DEEIAKKAFHLLNKQG-LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIF 664 (866)
Q Consensus 610 ------------------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~ 664 (866)
...+.+.+.+.+++.| ++++ ++++++++.+++.+.+++. +|. ++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~--~g~------~~~a 156 (388)
T PRK07608 86 GDAHARLHFSAYQAGVPQLAWIVESSLIERALWAALRFQPNLTWF-PARAQGLEVDPDAATLTLA--DGQ------VLRA 156 (388)
T ss_pred ECCCceeEeeccccCCCCCEEEEEhHHHHHHHHHHHHhCCCcEEE-cceeEEEEecCCeEEEEEC--CCC------EEEe
Confidence 0122334445566676 8888 9999999877777766654 554 7999
Q ss_pred cEEEEeeccccCC
Q psy9583 665 DKLLIAIGRIPNT 677 (866)
Q Consensus 665 D~vi~a~G~~p~~ 677 (866)
|.||.|.|.....
T Consensus 157 ~~vI~adG~~S~v 169 (388)
T PRK07608 157 DLVVGADGAHSWV 169 (388)
T ss_pred eEEEEeCCCCchH
Confidence 9999999986543
No 425
>PTZ00188 adrenodoxin reductase; Provisional
Probab=97.16 E-value=0.0024 Score=71.99 Aligned_cols=91 Identities=18% Similarity=0.131 Sum_probs=61.5
Q ss_pred CCCeEEEECCcHHHHHHHHHHH-hcCCcEEEEecCCcCCCc----c---c---HHHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWR-RLGSEVTILEMSSNFLNT----V---D---EEIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~-~~g~~Vtli~~~~~~l~~----~---d---~~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
.+++|+|||+|+.|+.+|..|. +.|.+|+++++.+.+... . . ..+...+.+.+...+++++.+..+-.
T Consensus 38 ~~krVAIVGaGPAGlyaA~~Ll~~~g~~VtlfEk~p~pgGLvR~GVaPdh~~~k~v~~~f~~~~~~~~v~f~gnv~VG~- 116 (506)
T PTZ00188 38 KPFKVGIIGAGPSALYCCKHLLKHERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGV- 116 (506)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhcCCeEEEEecCCCCccEEEEeCCCCCccHHHHHHHHHHHHhhCCeEEEeeeEecC-
Confidence 4789999999999999999764 679999999999877421 1 1 23444455556667888875444311
Q ss_pred EEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 638 ~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.++++ .....+|.||+|+|..+.
T Consensus 117 -------Dvt~e---------eL~~~YDAVIlAtGA~~l 139 (506)
T PTZ00188 117 -------DLKME---------ELRNHYNCVIFCCGASEV 139 (506)
T ss_pred -------ccCHH---------HHHhcCCEEEEEcCCCCC
Confidence 01111 112368999999998753
No 426
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=97.15 E-value=0.0049 Score=68.22 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=39.7
Q ss_pred HHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 614 AKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 614 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
...+.+.+++.|++++.+++|+++..+++.+. +.+. +| .+.+|.||+|+|.....
T Consensus 150 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~gv~~~--~g-------~i~ad~vV~a~G~~s~~ 205 (358)
T PF01266_consen 150 IQALAAEAQRAGVEIRTGTEVTSIDVDGGRVTGVRTS--DG-------EIRADRVVLAAGAWSPQ 205 (358)
T ss_dssp HHHHHHHHHHTT-EEEESEEEEEEEEETTEEEEEEET--TE-------EEEECEEEE--GGGHHH
T ss_pred hhhhHHHHHHhhhhccccccccchhhccccccccccc--cc-------ccccceeEeccccccee
Confidence 34444666778999999999999999888876 6553 44 59999999999975443
No 427
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=97.15 E-value=0.0043 Score=69.70 Aligned_cols=96 Identities=18% Similarity=0.325 Sum_probs=71.8
Q ss_pred eEEEECCcHHHHHHHHHHHhcC-CcEEEEecCCcCCC---------ccc-------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLG-SEVTILEMSSNFLN---------TVD------------------------------- 610 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g-~~Vtli~~~~~~l~---------~~d------------------------------- 610 (866)
.|+|||||+.|+-+|..|++.| .+|+++++.+.... .+.
T Consensus 1 dv~IvGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 80 (382)
T TIGR01984 1 DVIIVGGGLVGLSLALALSRLGKIKIALIEANSPSAAQPGFDARSLALSYGSKQILEKLGLWPKLAPFATPILDIHVSDQ 80 (382)
T ss_pred CEEEECccHHHHHHHHHHhcCCCceEEEEeCCCccccCCCCCCeeEeccHHHHHHHHHCCChhhhHhhcCccceEEEEcC
Confidence 4899999999999999999999 99999987643210 000
Q ss_pred ------------------------HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEecc
Q psy9583 611 ------------------------EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFD 665 (866)
Q Consensus 611 ------------------------~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D 665 (866)
..+.+.+.+.+.+ .|++++.+++++++..+++++.+.+. +|. ++.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~--~g~------~~~ad 152 (382)
T TIGR01984 81 GHFGATHLRASEFGLPALGYVVELADLGQALLSRLALLTNIQLYCPARYKEIIRNQDYVRVTLD--NGQ------QLRAK 152 (382)
T ss_pred CCCceEEechhhcCCCccEEEEEcHHHHHHHHHHHHhCCCcEEEcCCeEEEEEEcCCeEEEEEC--CCC------EEEee
Confidence 1123333444555 48999999999999887777776654 554 78999
Q ss_pred EEEEeecccc
Q psy9583 666 KLLIAIGRIP 675 (866)
Q Consensus 666 ~vi~a~G~~p 675 (866)
.||.|.|...
T Consensus 153 ~vV~AdG~~S 162 (382)
T TIGR01984 153 LLIAADGANS 162 (382)
T ss_pred EEEEecCCCh
Confidence 9999999764
No 428
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=97.15 E-value=0.0015 Score=72.05 Aligned_cols=100 Identities=24% Similarity=0.384 Sum_probs=75.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcC--CcEEEEecCCcCCC-cc----------cHHHHHHHHHHHHHcC-CEEEeCceEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLG--SEVTILEMSSNFLN-TV----------DEEIAKKAFHLLNKQG-LNIILNTKIH 635 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g--~~Vtli~~~~~~l~-~~----------d~~~~~~l~~~l~~~G-V~i~~~~~v~ 635 (866)
.++++|+|||+-|+.++..|.+.- .+|+++++++..+- .+ +.++...+.+.++..+ |+++. .+|+
T Consensus 3 ~~~iVIlGgGfgGl~~a~~l~~~~~~~~itLVd~~~~hl~~plL~eva~g~l~~~~i~~p~~~~~~~~~~v~~~~-~~V~ 81 (405)
T COG1252 3 KKRIVILGGGFGGLSAAKRLARKLPDVEITLVDRRDYHLFTPLLYEVATGTLSESEIAIPLRALLRKSGNVQFVQ-GEVT 81 (405)
T ss_pred CceEEEECCcHHHHHHHHHhhhcCCCCcEEEEeCCCccccchhhhhhhcCCCChhheeccHHHHhcccCceEEEE-EEEE
Confidence 578999999999999999999874 88999999987652 11 3455666777777555 88774 5677
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNL 680 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l 680 (866)
+|..++.. |.+. ++. .+.+|.+|+|+|..++....
T Consensus 82 ~ID~~~k~--V~~~--~~~------~i~YD~LVvalGs~~~~fgi 116 (405)
T COG1252 82 DIDRDAKK--VTLA--DLG------EISYDYLVVALGSETNYFGI 116 (405)
T ss_pred EEcccCCE--EEeC--CCc------cccccEEEEecCCcCCcCCC
Confidence 77766544 3343 333 79999999999999988653
No 429
>PRK09126 hypothetical protein; Provisional
Probab=97.14 E-value=0.005 Score=69.51 Aligned_cols=100 Identities=18% Similarity=0.339 Sum_probs=73.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---C---c------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---N---T------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---~---~------------------------------------ 608 (866)
-+|+|||||+.|+-+|..|++.|.+|+++++.+... + .
T Consensus 4 ~dviIvGgG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~~i~l~~~~~~~L~~lGl~~~~~~~~~~~~~~~~~~ 83 (392)
T PRK09126 4 SDIVVVGAGPAGLSFARSLAGSGLKVTLIERQPLAALADPAFDGREIALTHASREILQRLGAWDRIPEDEISPLRDAKVL 83 (392)
T ss_pred ccEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCcccccCCCCchhHHHhhHHHHHHHHHCCChhhhccccCCccceEEEE
Confidence 469999999999999999999999999999865310 0 0
Q ss_pred ---------cc---------------HHHHHHHHHHH-HHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 609 ---------VD---------------EEIAKKAFHLL-NKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 609 ---------~d---------------~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
++ ..+.+.+.+.+ +..|++++.++++++++.+++.+.+.+. +|. ++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~g~~i~~~~~v~~~~~~~~~~~v~~~--~g~------~~~ 155 (392)
T PRK09126 84 NGRSPFALTFDARGRGADALGYLVPNHLIRRAAYEAVSQQDGIELLTGTRVTAVRTDDDGAQVTLA--NGR------RLT 155 (392)
T ss_pred cCCCCceeEeehhhcCCCcceEEEeHHHHHHHHHHHHhhCCCcEEEcCCeEEEEEEcCCeEEEEEc--CCC------EEE
Confidence 00 00112222333 3468999999999999887777666664 555 799
Q ss_pred ccEEEEeeccccCCC
Q psy9583 664 FDKLLIAIGRIPNTN 678 (866)
Q Consensus 664 ~D~vi~a~G~~p~~~ 678 (866)
+|.||.|.|..+...
T Consensus 156 a~~vI~AdG~~S~vr 170 (392)
T PRK09126 156 ARLLVAADSRFSATR 170 (392)
T ss_pred eCEEEEeCCCCchhh
Confidence 999999999876653
No 430
>TIGR01423 trypano_reduc trypanothione-disulfide reductase. Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Probab=97.13 E-value=0.0021 Score=74.18 Aligned_cols=99 Identities=11% Similarity=0.056 Sum_probs=64.9
Q ss_pred cceeeecCCccHHHHHHHHHHC---CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
.+++|||||+.|+.+|..+... |.+|+||++.+ .+... +
T Consensus 188 ~~vvIIGgG~iG~E~A~~~~~l~~~G~~Vtli~~~~------~il~~------------------------------~-- 229 (486)
T TIGR01423 188 RRVLTVGGGFISVEFAGIFNAYKPRGGKVTLCYRNN------MILRG------------------------------F-- 229 (486)
T ss_pred CeEEEECCCHHHHHHHHHHHHhccCCCeEEEEecCC------ccccc------------------------------c--
Confidence 6799999999999999766554 99999999862 21000 0
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
+.+ +.+.+...+++.||+++.+..+. +.. + ......+...++.++.+|.+++|+|..|..
T Consensus 230 ---d~~--------------~~~~l~~~L~~~GI~i~~~~~v~~i~~-~-~~~~~~v~~~~g~~i~~D~vl~a~G~~Pn~ 290 (486)
T TIGR01423 230 ---DST--------------LRKELTKQLRANGINIMTNENPAKVTL-N-ADGSKHVTFESGKTLDVDVVMMAIGRVPRT 290 (486)
T ss_pred ---CHH--------------HHHHHHHHHHHcCCEEEcCCEEEEEEE-c-CCceEEEEEcCCCEEEcCEEEEeeCCCcCc
Confidence 000 11123445777899999987655 321 1 112233433456689999999999998874
No 431
>PRK07190 hypothetical protein; Provisional
Probab=97.12 E-value=0.005 Score=71.27 Aligned_cols=97 Identities=23% Similarity=0.277 Sum_probs=73.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---c---------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---T--------------------------------------- 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---~--------------------------------------- 608 (866)
-.|+|||+|++|+-+|..|++.|.+|.++++.+.... .
T Consensus 6 ~dVlIVGAGPaGL~lA~~Lar~Gi~V~llEr~~~~~~~gra~~l~~~tle~L~~lGl~~~l~~~~~~~~~~~~~~~g~~i 85 (487)
T PRK07190 6 TDVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNARTLQLLELVDLFDELYPLGKPCNTSSVWANGKFI 85 (487)
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCCEEEEeCCCcccccccceEeCHHHHHHHHhcChHHHHHhhCccceeEEEecCCceE
Confidence 4699999999999999999999999999987643210 0
Q ss_pred ---------cc------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEE
Q psy9583 609 ---------VD------------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKL 667 (866)
Q Consensus 609 ---------~d------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~v 667 (866)
++ ..+...+.+.+++.|++++.++++++++.+++++.+.+. +|. ++.++.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~q~~le~~L~~~~~~~Gv~v~~~~~v~~l~~~~~~v~v~~~--~g~------~v~a~~v 157 (487)
T PRK07190 86 SRQSSWWEELEGCLHKHFLMLGQSYVEKLLDDKLKEAGAAVKRNTSVVNIELNQAGCLTTLS--NGE------RIQSRYV 157 (487)
T ss_pred eeccccCccCCcCCCCceEecCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCeeEEEEC--CCc------EEEeCEE
Confidence 00 112223445567789999999999999988877766653 454 7899999
Q ss_pred EEeecccc
Q psy9583 668 LIAIGRIP 675 (866)
Q Consensus 668 i~a~G~~p 675 (866)
|.|.|.+.
T Consensus 158 VgADG~~S 165 (487)
T PRK07190 158 IGADGSRS 165 (487)
T ss_pred EECCCCCH
Confidence 99999865
No 432
>PRK07045 putative monooxygenase; Reviewed
Probab=97.11 E-value=0.0055 Score=69.04 Aligned_cols=101 Identities=16% Similarity=0.224 Sum_probs=71.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC--c---c------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN--T---V------------------------------------ 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~--~---~------------------------------------ 609 (866)
-+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. . +
T Consensus 6 ~~V~IiGgGpaGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~l~~~~~~~L~~lGl~~~~~~~~~~~~~~~~~~~~g~~ 85 (388)
T PRK07045 6 VDVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLRRDAMRLYHDKEL 85 (388)
T ss_pred eEEEEECCcHHHHHHHHHHHhcCCcEEEEeCCCcccCCCcccccCccHHHHHHHcCCHHHHHhcccccccceEEecCCcE
Confidence 4799999999999999999999999999987654310 0 0
Q ss_pred ------------c-------HHHHHHHHHHHH-HcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEE
Q psy9583 610 ------------D-------EEIAKKAFHLLN-KQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLI 669 (866)
Q Consensus 610 ------------d-------~~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~ 669 (866)
. .++.+.+.+.+. ..|++++++++++.++.++++..+.+...+|+ ++.+|.||.
T Consensus 86 ~~~~~~~~~~~~g~~~~i~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~------~~~~~~vIg 159 (388)
T PRK07045 86 IASLDYRSASALGYFILIPCEQLRRLLLAKLDGLPNVRLRFETSIERIERDADGTVTSVTLSDGE------RVAPTVLVG 159 (388)
T ss_pred EEEecCCccccCCceEEccHHHHHHHHHHHHhcCCCeeEEeCCEEEEEEECCCCcEEEEEeCCCC------EEECCEEEE
Confidence 0 012222333333 24799999999999988765543233333565 789999999
Q ss_pred eeccccCC
Q psy9583 670 AIGRIPNT 677 (866)
Q Consensus 670 a~G~~p~~ 677 (866)
|.|.....
T Consensus 160 ADG~~S~v 167 (388)
T PRK07045 160 ADGARSMI 167 (388)
T ss_pred CCCCChHH
Confidence 99987644
No 433
>TIGR02731 phytoene_desat phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway.
Probab=97.11 E-value=0.00041 Score=79.95 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=36.0
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+|+|||||++||+||..|++.|++|+|+|+. +.+||.|.
T Consensus 1 ~v~IiGaG~aGl~aA~~L~~~G~~v~vlE~~------~~~GG~~~ 39 (453)
T TIGR02731 1 RVAIAGAGLAGLSCAKYLADAGHTPIVLEAR------DVLGGKVA 39 (453)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEecC------CCCCCCcc
Confidence 5899999999999999999999999999998 78899763
No 434
>PF13533 Biotin_lipoyl_2: Biotin-lipoyl like
Probab=97.10 E-value=0.001 Score=50.41 Aligned_cols=35 Identities=20% Similarity=0.517 Sum_probs=31.4
Q ss_pred eeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 46 ILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 46 ~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
++.|.||.+|+|.++++++|+.|+.|++|+.++..
T Consensus 2 ~~~I~~~~~G~V~~v~V~~G~~VkkGd~L~~ld~~ 36 (50)
T PF13533_consen 2 TVTIQAPVSGRVESVYVKEGQQVKKGDVLLVLDSP 36 (50)
T ss_pred eEEEeCCCCEEEEEEEecCCCEEcCCCEEEEECcH
Confidence 36789999999999999999999999999999854
No 435
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria. Though its precise molecular function of these proteins is not known, it is involved in the 5-carboxymethylaminomethyl modification of the wobble uridine base in some tRNAs [, ]. Sequence variations in the human mitochondrial protein may influence the severity of aminoglycoside-induced deafness []. This entry is found in GidA and related proteins, such as the methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase enzyme TrmFO.; GO: 0050660 flavin adenine dinucleotide binding, 0008033 tRNA processing; PDB: 3CES_C 3CP2_A 3G05_A 2CUL_A 3CP8_A 2ZXI_B 2ZXH_A 3G5S_A 3G5R_A 3G5Q_A.
Probab=97.09 E-value=0.0051 Score=67.64 Aligned_cols=94 Identities=20% Similarity=0.333 Sum_probs=64.9
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEec-CCcCCC-------------------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEM-SSNFLN------------------------------------------- 607 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~-~~~~l~------------------------------------------- 607 (866)
.|+|||||..|+|.|..+++.|.+|.++.. .+.+..
T Consensus 1 DViVVGgG~AG~eAA~aaAr~G~~V~Lit~~~d~i~~~~Cnpsigg~~kg~L~~Eidalgg~m~~~aD~~~i~~~~lN~s 80 (392)
T PF01134_consen 1 DVIVVGGGHAGCEAALAAARMGAKVLLITHNTDTIGEMSCNPSIGGIAKGHLVREIDALGGLMGRAADETGIHFRMLNRS 80 (392)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT--EEEEES-GGGTT--SSSSEEESTTHHHHHHHHHHTT-SHHHHHHHHEEEEEEESTT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeecccccccccchhhhccccccchhHHHhhhhhHHHHHHhHhhhhhhccccc
Confidence 489999999999999999999999999932 222110
Q ss_pred ----------ccc-HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 608 ----------TVD-EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 608 ----------~~d-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
..| ..+...+.+.|++ .+++++ ...|+++..+++.+.-... .+|. .+.+|.||+|||.
T Consensus 81 kGpav~a~r~qvDr~~y~~~~~~~l~~~~nl~i~-~~~V~~l~~e~~~v~GV~~-~~g~------~~~a~~vVlaTGt 150 (392)
T PF01134_consen 81 KGPAVHALRAQVDRDKYSRAMREKLESHPNLTII-QGEVTDLIVENGKVKGVVT-KDGE------EIEADAVVLATGT 150 (392)
T ss_dssp S-GGCTEEEEEE-HHHHHHHHHHHHHTSTTEEEE-ES-EEEEEECTTEEEEEEE-TTSE------EEEECEEEE-TTT
T ss_pred CCCCccchHhhccHHHHHHHHHHHHhcCCCeEEE-EcccceEEecCCeEEEEEe-CCCC------EEecCEEEEeccc
Confidence 011 2335555666766 678886 5789999887776654333 4665 8999999999998
No 436
>TIGR00527 gcvH glycine cleavage system H protein. The genome of Aquifex aeolicus contains one protein scoring above the trusted cutoff and clustering with other bacterial H proteins, and four more proteins clustering together and scoring below the trusted cutoff; it seems doubtful that all of these homologs are authentic H protein. The Chlamydial homolog of H protein is nearly as divergent as the Aquifex outgroup, is not accompanied by P and T proteins, is not included in the seed alignment, and consequently also scores below the trusted cutoff.
Probab=97.08 E-value=0.00073 Score=62.26 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=37.4
Q ss_pred eCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC
Q psy9583 25 KKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS 66 (866)
Q Consensus 25 ~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~ 66 (866)
.++|+.|++||+++.||++|+..+|.||.+|+|.++.-..-+
T Consensus 44 p~~G~~v~~g~~~~~IEs~K~~~~i~sPvsG~Vv~vN~~l~~ 85 (127)
T TIGR00527 44 PEVGAEVSAGESCGSVESVKAASDIYAPVSGTVVEVNDALED 85 (127)
T ss_pred CCCCCEecCCCEEEEEEEeeeeeeeecCCcEEEEEehHhhhh
Confidence 368999999999999999999999999999999988755443
No 437
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.08 E-value=0.0018 Score=77.60 Aligned_cols=91 Identities=25% Similarity=0.458 Sum_probs=70.8
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++|+|||+|+.|+..|..|++.|.+|+++++.+.+.. .++.++.+...+.+++.||++++++.+..
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~--- 385 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGR--- 385 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCC---
Confidence 468999999999999999999999999999999886531 25677777777889999999999987631
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+.+. + ....+|.|++|+|..+.
T Consensus 386 -----~~~~~--~-------l~~~~DaV~latGa~~~ 408 (639)
T PRK12809 386 -----DITFS--D-------LTSEYDAVFIGVGTYGM 408 (639)
T ss_pred -----cCCHH--H-------HHhcCCEEEEeCCCCCC
Confidence 01121 1 13458999999998653
No 438
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=97.08 E-value=0.0054 Score=68.96 Aligned_cols=97 Identities=13% Similarity=0.281 Sum_probs=72.2
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--------C--ccc-------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--------N--TVD------------------------------- 610 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--------~--~~d------------------------------- 610 (866)
.|+|||+|+.|+-+|..|++.|.+|+++++.+... . .+.
T Consensus 1 dViIvGaG~aGl~~A~~L~~~G~~v~v~Er~~~~~~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 80 (385)
T TIGR01988 1 DIVIVGGGMVGLALALALARSGLKIALIEATPAEAAATPGFDNRVSALSAASIRLLEKLGVWDKIEPDRAQPIRDIHVSD 80 (385)
T ss_pred CEEEECCCHHHHHHHHHHhcCCCEEEEEeCCCccccCCCCCCcceeecCHHHHHHHHHCCchhhhhhhcCCCceEEEEEe
Confidence 48999999999999999999999999999885320 0 000
Q ss_pred -------------------------HHHHHHHHHHHHHcC-CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEec
Q psy9583 611 -------------------------EEIAKKAFHLLNKQG-LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIF 664 (866)
Q Consensus 611 -------------------------~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~ 664 (866)
..+.+.+.+.+.+.| ++++.+++|++++.+++++.+.+. +|. ++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~v~~~~~v~~i~~~~~~~~v~~~--~g~------~~~~ 152 (385)
T TIGR01988 81 GGSFGALHFDADEIGLEALGYVVENRVLQQALWERLQEYPNVTLLCPARVVELPRHSDHVELTLD--DGQ------QLRA 152 (385)
T ss_pred CCCCceEEechhhcCCCccEEEEEcHHHHHHHHHHHHhCCCcEEecCCeEEEEEecCCeeEEEEC--CCC------EEEe
Confidence 112233444555666 899999999999887777766554 565 7899
Q ss_pred cEEEEeeccccC
Q psy9583 665 DKLLIAIGRIPN 676 (866)
Q Consensus 665 D~vi~a~G~~p~ 676 (866)
|.||.|.|....
T Consensus 153 ~~vi~adG~~S~ 164 (385)
T TIGR01988 153 RLLVGADGANSK 164 (385)
T ss_pred eEEEEeCCCCCH
Confidence 999999997654
No 439
>PRK12416 protoporphyrinogen oxidase; Provisional
Probab=97.07 E-value=0.00043 Score=80.03 Aligned_cols=41 Identities=27% Similarity=0.382 Sum_probs=36.2
Q ss_pred cceeeecCCccHHHHHHHHHHC------CCeEEEEeccCCCcccccCCCccce
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL------GFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~------g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
++|+|||||++||+||+.|++. |++|+|+|+. +++||.+..
T Consensus 2 ~~v~VIGaGisGL~aA~~L~~~~~~~~~~~~V~vlEa~------~r~GGr~~T 48 (463)
T PRK12416 2 KTVVVIGGGITGLSTMFYLEKLKKDYNIDLNLILVEKE------EYLGGKIHS 48 (463)
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhccCCCccEEEEecC------CCccceEEE
Confidence 5699999999999999999986 3799999998 789998743
No 440
>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup. Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase.
Probab=97.07 E-value=0.002 Score=76.00 Aligned_cols=47 Identities=15% Similarity=0.052 Sum_probs=34.5
Q ss_pred CCcEEeCCCCC---------CCCCCEEEecccCC-C-C---C----cHHHHHHHHHHHHHHHhCC
Q psy9583 692 NNFIIVNDNCE---------TNIPNIYAIGDVVR-G-P---M----LAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 692 ~G~i~Vd~~l~---------Ts~~~VyA~GD~a~-~-~---~----~~~~A~~~g~~aa~~i~g~ 738 (866)
.|.|.+|...| |++||+||+|+|++ + . . ....|+-.|++|+++++..
T Consensus 331 ~GGi~id~~g~vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsl~~a~vfGr~Ag~~aa~~ 395 (565)
T TIGR01816 331 MGGIPTNYHGQVLRDGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEY 395 (565)
T ss_pred cCCceeCCCceEcccccCCCCccCCeeecccccccCCCccccchhhHHHHHHHHHHHHHHHHHHh
Confidence 46677777666 68999999999974 2 1 1 3456778899999998653
No 441
>PRK10157 putative oxidoreductase FixC; Provisional
Probab=97.07 E-value=0.0067 Score=69.18 Aligned_cols=97 Identities=14% Similarity=0.188 Sum_probs=70.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC------------------cc-----------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------TV----------------------- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------~~----------------------- 609 (866)
-.|+|||||+.|+-+|..|++.|.+|.++++.+.... .+
T Consensus 6 ~DViIVGaGpAG~~aA~~La~~G~~V~llEr~~~~g~k~~~gg~l~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (428)
T PRK10157 6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSA 85 (428)
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEEcCCCCCCcccccceechhhHHHHhhhhhhcCcccceeeeeeEEEEcCCCc
Confidence 3699999999999999999999999999988643210 00
Q ss_pred ---------------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEE
Q psy9583 610 ---------------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLL 668 (866)
Q Consensus 610 ---------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi 668 (866)
-..+-+.+.+..++.|++++.++.|+++..+++.+..... ++. ++.+|.||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~R~~fD~~L~~~a~~~Gv~i~~~~~V~~i~~~~g~v~~v~~--~g~------~i~A~~VI 157 (428)
T PRK10157 86 MTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEA--DGD------VIEAKTVI 157 (428)
T ss_pred eeeccccccccCCCCCceeeEHHHHHHHHHHHHHHCCCEEECCCEEEEEEEeCCEEEEEEc--CCc------EEECCEEE
Confidence 0111233555666789999999999998876655433222 444 78999999
Q ss_pred Eeecccc
Q psy9583 669 IAIGRIP 675 (866)
Q Consensus 669 ~a~G~~p 675 (866)
.|+|...
T Consensus 158 ~A~G~~s 164 (428)
T PRK10157 158 LADGVNS 164 (428)
T ss_pred EEeCCCH
Confidence 9999753
No 442
>PRK06753 hypothetical protein; Provisional
Probab=97.06 E-value=0.0057 Score=68.49 Aligned_cols=98 Identities=20% Similarity=0.383 Sum_probs=70.7
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-----cccHHH---------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-----TVDEEI--------------------------------- 613 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-----~~d~~~--------------------------------- 613 (866)
+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. .+.+..
T Consensus 2 ~V~IvGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~g~gi~l~~~~~~~L~~~gl~~~~~~~~~~~~~~~~~~~~g~~~ 81 (373)
T PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESVKEVGAGIGIGDNVIKKLGNHDLAKGIKNAGQILSTMNLLDDKGTLL 81 (373)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEecCCcccccccceeeChHHHHHHHhcChHHHHHhcCCcccceeEEcCCCCEE
Confidence 699999999999999999999999999998765321 001110
Q ss_pred ---------------HHHHHHHHHHc--CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 614 ---------------AKKAFHLLNKQ--GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 614 ---------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
...+.+.|.+. +.++++++++++++.+++++.+++. +|. .+.+|+||.|-|....
T Consensus 82 ~~~~~~~~~~~~~i~R~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g~------~~~~~~vigadG~~S~ 153 (373)
T PRK06753 82 NKVKLKSNTLNVTLHRQTLIDIIKSYVKEDAIFTGKEVTKIENETDKVTIHFA--DGE------SEAFDLCIGADGIHSK 153 (373)
T ss_pred eecccccCCccccccHHHHHHHHHHhCCCceEEECCEEEEEEecCCcEEEEEC--CCC------EEecCEEEECCCcchH
Confidence 11122333221 3568899999999887777777664 565 7899999999997654
Q ss_pred C
Q psy9583 677 T 677 (866)
Q Consensus 677 ~ 677 (866)
.
T Consensus 154 v 154 (373)
T PRK06753 154 V 154 (373)
T ss_pred H
Confidence 4
No 443
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=97.05 E-value=0.0015 Score=80.06 Aligned_cols=93 Identities=24% Similarity=0.345 Sum_probs=69.7
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------C--cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------N--TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .++.++.....+.+++.||+|++++.+.
T Consensus 430 ~~~~V~IIGaGpAGl~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~rlp~~~~~~~~~~l~~~gv~~~~~~~v~---- 505 (752)
T PRK12778 430 NGKKVAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGGVLKYGIPEFRLPKKIVDVEIENLKKLGVKFETDVIVG---- 505 (752)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEC----
Confidence 46899999999999999999999999999999865432 1 2356667777788899999999987651
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeecc-ccCC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR-IPNT 677 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~-~p~~ 677 (866)
. .+++. +. ....+|.|++|+|. .|..
T Consensus 506 --~--~v~~~--~l------~~~~ydavvlAtGa~~~~~ 532 (752)
T PRK12778 506 --K--TITIE--EL------EEEGFKGIFIASGAGLPNF 532 (752)
T ss_pred --C--cCCHH--HH------hhcCCCEEEEeCCCCCCCC
Confidence 1 12222 11 14568999999998 4654
No 444
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=97.05 E-value=0.0036 Score=70.60 Aligned_cols=99 Identities=11% Similarity=0.204 Sum_probs=72.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--------------------------------C----c------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--------------------------------N----T------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--------------------------------~----~------ 608 (866)
-+|+|||||+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 6 ~dViIvGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 85 (391)
T PRK08020 6 TDIAIVGGGMVGAALALGLAQHGFSVAVLEHAAPAPFDADSQPDVRISAISAASVALLKGLGVWDAVQAMRSHPYRRLET 85 (391)
T ss_pred ccEEEECcCHHHHHHHHHHhcCCCEEEEEcCCCCCcccccCCCCceEEeccHHHHHHHHHcCChhhhhhhhCcccceEEE
Confidence 479999999999999999999999999998764100 0 0
Q ss_pred ---------c---------------cHHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 609 ---------V---------------DEEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 609 ---------~---------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
+ ...+.+.+.+.+++. |++++.++.++++..+++++.+.+. +|. ++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~--~g~------~~~ 157 (391)
T PRK08020 86 WEWETAHVVFDAAELKLPELGYMVENRVLQLALWQALEAHPNVTLRCPASLQALQRDDDGWELTLA--DGE------EIQ 157 (391)
T ss_pred EeCCCCeEEecccccCCCccEEEEEcHHHHHHHHHHHHcCCCcEEEcCCeeEEEEEcCCeEEEEEC--CCC------EEE
Confidence 0 011223344445555 8999999999999877777666654 554 789
Q ss_pred ccEEEEeeccccCC
Q psy9583 664 FDKLLIAIGRIPNT 677 (866)
Q Consensus 664 ~D~vi~a~G~~p~~ 677 (866)
+|.||.|.|.....
T Consensus 158 a~~vI~AdG~~S~v 171 (391)
T PRK08020 158 AKLVIGADGANSQV 171 (391)
T ss_pred eCEEEEeCCCCchh
Confidence 99999999987653
No 445
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.05 E-value=0.0017 Score=75.46 Aligned_cols=90 Identities=20% Similarity=0.296 Sum_probs=68.7
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINY 648 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~ 648 (866)
.+++++|+|+|.+|+++|..|.++|.+|+++++.+. +....+.+.|++.||+++++..+. .
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~-------~~~~~~~~~l~~~gv~~~~~~~~~------------~ 75 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDD-------ERHRALAAILEALGATVRLGPGPT------------L 75 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCch-------hhhHHHHHHHHHcCCEEEECCCcc------------c
Confidence 367999999999999999999999999999987643 234456677888999998776542 0
Q ss_pred eeCCCCccceeEEEeccEEEEeeccccCCCCCC-ccccCeee
Q psy9583 649 SNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLN-IDKIGLKV 689 (866)
Q Consensus 649 ~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~-l~~~gl~~ 689 (866)
...+|.||+++|..|+.+++. +.+.|+++
T Consensus 76 ------------~~~~D~Vv~s~Gi~~~~~~~~~a~~~gi~v 105 (480)
T PRK01438 76 ------------PEDTDLVVTSPGWRPDAPLLAAAADAGIPV 105 (480)
T ss_pred ------------cCCCCEEEECCCcCCCCHHHHHHHHCCCee
Confidence 234799999999999988631 23445544
No 446
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=97.05 E-value=0.0018 Score=79.72 Aligned_cols=90 Identities=22% Similarity=0.363 Sum_probs=66.3
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN 640 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 640 (866)
+++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .++.+......+.+.+.||+++++....
T Consensus 537 ~kkVaIIGGGPAGLSAA~~LAr~G~~VTV~Ek~~~lGG~l~~~IP~~rlp~e~l~~~ie~l~~~GVe~~~g~~~d----- 611 (1012)
T TIGR03315 537 AHKVAVIGAGPAGLSAGYFLARAGHPVTVFEKKEKPGGVVKNIIPEFRISAESIQKDIELVKFHGVEFKYGCSPD----- 611 (1012)
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEecccccCceeeecccccCCCHHHHHHHHHHHHhcCcEEEEecccc-----
Confidence 57999999999999999999999999999998765421 2345556666677888999999874311
Q ss_pred CCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 641 KENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 641 ~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
+.+. +.. ...+|.|++|+|..+..
T Consensus 612 -----~~ve--~l~------~~gYDaVIIATGA~~~~ 635 (1012)
T TIGR03315 612 -----LTVA--ELK------NQGYKYVILAIGAWKHG 635 (1012)
T ss_pred -----eEhh--hhh------cccccEEEECCCCCCCC
Confidence 1111 111 34589999999987543
No 447
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism]
Probab=97.03 E-value=0.00052 Score=76.79 Aligned_cols=39 Identities=26% Similarity=0.438 Sum_probs=36.0
Q ss_pred ceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+++|||||++||+||++|++.+ .+++|+|++ +.+||...
T Consensus 2 ~i~IiG~GiaGLsaAy~L~k~~p~~~i~lfE~~------~r~GG~l~ 42 (444)
T COG1232 2 KIAIIGGGIAGLSAAYRLQKAGPDVEVTLFEAD------DRVGGLLR 42 (444)
T ss_pred eEEEECCcHHHHHHHHHHHHhCCCCcEEEEecC------CCCCceEE
Confidence 5999999999999999999999 999999998 78999754
No 448
>PRK08013 oxidoreductase; Provisional
Probab=97.02 E-value=0.0065 Score=68.75 Aligned_cols=99 Identities=12% Similarity=0.193 Sum_probs=72.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-----------ccc-----------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-----------TVD----------------------------- 610 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-----------~~d----------------------------- 610 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.... .+.
T Consensus 4 ~dV~IvGaGpaGl~~A~~La~~G~~v~viE~~~~~~~~~g~~~~~r~~~l~~~s~~~L~~lGl~~~~~~~~~~~~~~~~~ 83 (400)
T PRK08013 4 VDVVIAGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADAPPALRVSAINAASEKLLTRLGVWQDILARRASCYHGMEV 83 (400)
T ss_pred CCEEEECcCHHHHHHHHHHhhCCCEEEEEeCCCCcccccCCCCCceeeecchhHHHHHHHcCCchhhhhhcCccccEEEE
Confidence 4699999999999999999999999999998654110 000
Q ss_pred ---------------------------HHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEE
Q psy9583 611 ---------------------------EEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITS 662 (866)
Q Consensus 611 ---------------------------~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~ 662 (866)
..+.+.+.+.+.+. |+++++++++++++.+++.+.+++. +|. ++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~v~i~~~~~v~~i~~~~~~v~v~~~--~g~------~i 155 (400)
T PRK08013 84 WDKDSFGRIAFDDQSMGYSHLGHIIENSVIHYALWQKAQQSSDITLLAPAELQQVAWGENEAFLTLK--DGS------ML 155 (400)
T ss_pred EeCCCCceEEEcccccCCCccEEEEEhHHHHHHHHHHHhcCCCcEEEcCCeeEEEEecCCeEEEEEc--CCC------EE
Confidence 01112223333443 7899999999999887777777664 555 79
Q ss_pred eccEEEEeeccccCC
Q psy9583 663 IFDKLLIAIGRIPNT 677 (866)
Q Consensus 663 ~~D~vi~a~G~~p~~ 677 (866)
.+|+||-|-|.....
T Consensus 156 ~a~lvVgADG~~S~v 170 (400)
T PRK08013 156 TARLVVGADGANSWL 170 (400)
T ss_pred EeeEEEEeCCCCcHH
Confidence 999999999987544
No 449
>TIGR01730 RND_mfp RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane.
Probab=97.01 E-value=0.0011 Score=72.62 Aligned_cols=66 Identities=26% Similarity=0.360 Sum_probs=57.7
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecce--------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKV-------------------------------------------------- 45 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~-------------------------------------------------- 45 (866)
.+|+|.++++++||.|++||+|+.+++.-.
T Consensus 33 ~~G~V~~i~v~~G~~V~kG~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~~~~s~~~~~~~~~~~~ 112 (322)
T TIGR01730 33 VAGKITKISVREGQKVKKGQVLARLDDDDYQLALQAALAQLAAAEAQLELAQRSFERAERLVKRNAVSQADLDDAKAAVE 112 (322)
T ss_pred ccEEEEEEEcCCCCEEcCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHH
Confidence 459999999999999999999999975311
Q ss_pred ---------------------eeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 46 ---------------------ILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 46 ---------------------~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
...|.||.+|+|..+.+++|+.+..|++|+.+....
T Consensus 113 ~~~~~l~~~~~~l~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~g~~l~~i~~~~ 169 (322)
T TIGR01730 113 AAQADLEAAKASLASAQLNLRYTEIRAPFDGTIGRRLVEVGAYVTAGQTLATIVDLD 169 (322)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCEEECCCCcEEEEEEcCCCceeCCCCcEEEEEcCC
Confidence 246999999999999999999999999999997543
No 450
>PLN02546 glutathione reductase
Probab=96.99 E-value=0.0038 Score=73.11 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=66.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+|+|||||+.|+..|..|++.|.+|+|+++.+ .+... +
T Consensus 253 k~V~VIGgG~iGvE~A~~L~~~g~~Vtlv~~~~------~il~~------------------------------~----- 291 (558)
T PLN02546 253 EKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQK------KVLRG------------------------------F----- 291 (558)
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEecc------ccccc------------------------------c-----
Confidence 689999999999999999999999999999861 11000 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
+ ..+...+...+++.||+++.+..+. +.. .....+.+...++....+|.|++|+|..|..
T Consensus 292 --d------------~~~~~~l~~~L~~~GV~i~~~~~v~~i~~--~~~g~v~v~~~~g~~~~~D~Viva~G~~Pnt 352 (558)
T PLN02546 292 --D------------EEVRDFVAEQMSLRGIEFHTEESPQAIIK--SADGSLSLKTNKGTVEGFSHVMFATGRKPNT 352 (558)
T ss_pred --C------------HHHHHHHHHHHHHCCcEEEeCCEEEEEEE--cCCCEEEEEECCeEEEecCEEEEeeccccCC
Confidence 0 0001123445778899999887655 211 1123344544444445589999999998874
No 451
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=96.95 E-value=0.0064 Score=68.63 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=75.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--C----c------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--N----T------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--~----~------------------------------------ 608 (866)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 3 ~dV~IvGaGpaGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~a~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~g~ 82 (392)
T PRK08243 3 TQVAIIGAGPAGLLLGQLLHLAGIDSVVLERRSREYVEGRIRAGVLEQGTVDLLREAGVGERMDREGLVHDGIELRFDGR 82 (392)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCCEEEEEcCCccccccccceeEECHhHHHHHHHcCChHHHHhcCCccCcEEEEECCE
Confidence 579999999999999999999999999999876310 0 0
Q ss_pred -----c-------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEE-cCCeEEEEEeeCCCCccceeEEEeccEEEE
Q psy9583 609 -----V-------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKI-NKENVLINYSNKSTNVKTEIITSIFDKLLI 669 (866)
Q Consensus 609 -----~-------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~ 669 (866)
+ -+++.+.+.+...+.|+++++++++++++. +++...+++. .+|+ ..++.+|+||-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~a~~~gv~v~~~~~v~~i~~~~~~~~~V~~~-~~G~----~~~i~ad~vVg 157 (392)
T PRK08243 83 RHRIDLTELTGGRAVTVYGQTEVTRDLMAARLAAGGPIRFEASDVALHDFDSDRPYVTYE-KDGE----EHRLDCDFIAG 157 (392)
T ss_pred EEEeccccccCCceEEEeCcHHHHHHHHHHHHhCCCeEEEeeeEEEEEecCCCceEEEEE-cCCe----EEEEEeCEEEE
Confidence 0 012233344445667999999999999986 5556666664 2443 34789999999
Q ss_pred eeccccCCC
Q psy9583 670 AIGRIPNTN 678 (866)
Q Consensus 670 a~G~~p~~~ 678 (866)
|-|.....-
T Consensus 158 ADG~~S~vR 166 (392)
T PRK08243 158 CDGFHGVSR 166 (392)
T ss_pred CCCCCCchh
Confidence 999876553
No 452
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=96.93 E-value=0.003 Score=75.77 Aligned_cols=91 Identities=27% Similarity=0.352 Sum_probs=68.8
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------C--cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------N--TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .++.++.+...+.+.+.|+++++++.+..
T Consensus 192 ~~k~VaIIGaGpAGl~aA~~La~~G~~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~--- 268 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGR--- 268 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccC---
Confidence 35799999999999999999999999999999887652 2 23566667777888899999998876511
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+.+. +. ...+|.|++|+|..+.
T Consensus 269 -----dv~~~--~~-------~~~~DaVilAtGa~~~ 291 (652)
T PRK12814 269 -----DITLE--EL-------QKEFDAVLLAVGAQKA 291 (652)
T ss_pred -----ccCHH--HH-------HhhcCEEEEEcCCCCC
Confidence 01111 11 2348999999998754
No 453
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=96.93 E-value=0.0097 Score=63.94 Aligned_cols=99 Identities=20% Similarity=0.231 Sum_probs=72.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCc-EEEEecCCcC-----------CC-----cccHHHHHHHHHHHHHcCCEEEeCce
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNF-----------LN-----TVDEEIAKKAFHLLNKQGLNIILNTK 633 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~-----------l~-----~~d~~~~~~l~~~l~~~GV~i~~~~~ 633 (866)
-.|+|||+|+.|+-.|.++.+.+.+ +.+++....- .| ...+++.+...++.+.-|+++.. ..
T Consensus 4 ~DviIIG~GPAGl~AAiya~r~~l~~~li~~~~~~gg~~~~~~~venypg~~~~~~g~~L~~~~~~~a~~~~~~~~~-~~ 82 (305)
T COG0492 4 YDVIIIGGGPAGLTAAIYAARAGLKVVLILEGGEPGGQLTKTTDVENYPGFPGGILGPELMEQMKEQAEKFGVEIVE-DE 82 (305)
T ss_pred eeEEEECCCHHHHHHHHHHHHcCCCcEEEEecCCcCCccccceeecCCCCCccCCchHHHHHHHHHHHhhcCeEEEE-EE
Confidence 4689999999999999999999988 4454442110 01 13577788888888888999987 77
Q ss_pred EEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 634 v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+.+++..++.+.+... ++ +++++.||+|+|..+....
T Consensus 83 v~~v~~~~~~F~v~t~--~~-------~~~ak~vIiAtG~~~~~~~ 119 (305)
T COG0492 83 VEKVELEGGPFKVKTD--KG-------TYEAKAVIIATGAGARKLG 119 (305)
T ss_pred EEEEeecCceEEEEEC--CC-------eEEEeEEEECcCCcccCCC
Confidence 7777766544444443 44 5999999999998876654
No 454
>PRK12784 hypothetical protein; Provisional
Probab=96.93 E-value=0.0064 Score=48.62 Aligned_cols=65 Identities=15% Similarity=0.234 Sum_probs=59.3
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEec-ceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETD-KVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~-k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
-.|++-+.++.+++.|-+.++|+-|+++ +.-..|.--.+|.|..+.+++||.+..+..|+.++++
T Consensus 12 ~~G~Vekifi~esSyVYEWEkL~~I~~~dg~le~v~vGiSG~I~~v~Ve~Gq~i~~dtlL~~~edD 77 (84)
T PRK12784 12 YEGKVEEIFVNESSYVYEWEKLMMIRKNNGELEKVAVGISGNIRLVNVVVGQQIHTDTLLVRLEDD 77 (84)
T ss_pred cccEEEEEEEcCCceEEeeeeeeEEeecCCcEEEEEEeeeeeEEEEEeecCceecCCcEEEEEeec
Confidence 4699999999999999999999999994 5566688899999999999999999999999999864
No 455
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.92 E-value=0.0031 Score=75.99 Aligned_cols=90 Identities=22% Similarity=0.432 Sum_probs=68.5
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------C--cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------N--TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .++.++.....+.+++.|+++++++.+..
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~--- 402 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK--- 402 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC---
Confidence 46899999999999999999999999999999877642 1 24566666667788899999999887621
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+ +.+. + ....+|.|++|+|..+
T Consensus 403 -~----i~~~--~-------~~~~~DavilAtGa~~ 424 (654)
T PRK12769 403 -D----ISLE--S-------LLEDYDAVFVGVGTYR 424 (654)
T ss_pred -c----CCHH--H-------HHhcCCEEEEeCCCCC
Confidence 0 1111 1 0235899999999754
No 456
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=96.92 E-value=0.0088 Score=67.00 Aligned_cols=97 Identities=18% Similarity=0.337 Sum_probs=70.8
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCC----cCC---C--ccc--------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS----NFL---N--TVD-------------------------------- 610 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~----~~l---~--~~d-------------------------------- 610 (866)
+|+|||||+.|+-+|..|++.|.+|+++++.+ .+. . .+.
T Consensus 3 dV~IvGgG~~Gl~~A~~L~~~G~~v~l~E~~~~~~~~~~~~~r~~~l~~~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~ 82 (374)
T PRK06617 3 NTVILGCGLSGMLTALSFAQKGIKTTIFESKSVKSPEFFKDIRTTALTPHSKNFLFSIDIWEELEKFVAEMQDIYVVDNK 82 (374)
T ss_pred cEEEECCCHHHHHHHHHHHcCCCeEEEecCCCCCCCccCcCceEEEeCHHHHHHHHHCCcHHHHHhhcCCCcEEEEEECC
Confidence 58999999999999999999999999999752 100 0 001
Q ss_pred ---------------------HHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEE
Q psy9583 611 ---------------------EEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLL 668 (866)
Q Consensus 611 ---------------------~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi 668 (866)
.++.+.+.+.+.+. +++++++++++++..+++++.+.+. ++ ++.+|+||
T Consensus 83 g~~~~~~~~~~~~~~g~~v~r~~L~~~L~~~~~~~~~v~~~~~~~v~~i~~~~~~v~v~~~--~~-------~~~adlvI 153 (374)
T PRK06617 83 ASEILDLRNDADAVLGYVVKNSDFKKILLSKITNNPLITLIDNNQYQEVISHNDYSIIKFD--DK-------QIKCNLLI 153 (374)
T ss_pred CceEEEecCCCCCCcEEEEEHHHHHHHHHHHHhcCCCcEEECCCeEEEEEEcCCeEEEEEc--CC-------EEeeCEEE
Confidence 12233334444454 4888889999999887777777663 32 78999999
Q ss_pred EeeccccCC
Q psy9583 669 IAIGRIPNT 677 (866)
Q Consensus 669 ~a~G~~p~~ 677 (866)
.|-|.....
T Consensus 154 gADG~~S~v 162 (374)
T PRK06617 154 ICDGANSKV 162 (374)
T ss_pred EeCCCCchh
Confidence 999987655
No 457
>PLN02529 lysine-specific histone demethylase 1
Probab=96.91 E-value=0.00081 Score=80.29 Aligned_cols=33 Identities=33% Similarity=0.585 Sum_probs=31.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||||+||++||..|++.|++|+|+|+.
T Consensus 160 ~~~v~viGaG~aGl~aA~~l~~~g~~v~v~E~~ 192 (738)
T PLN02529 160 EGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGR 192 (738)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCcEEEEecC
Confidence 488999999999999999999999999999997
No 458
>PRK10476 multidrug resistance protein MdtN; Provisional
Probab=96.89 E-value=0.0022 Score=70.90 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=32.0
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
..|.||++|+|.++.+++|+.|.+|++|+.|....
T Consensus 209 ~~I~AP~dG~V~~~~~~~G~~V~~g~~l~~I~~~~ 243 (346)
T PRK10476 209 TTVRAPFDGRVVGLKVSVGEFAAPMQPIFTLIDTD 243 (346)
T ss_pred CEEECCCCcEEEeeecCCCCCcCCCCeEEEEecCC
Confidence 46999999999999999999999999999997654
No 459
>PLN02676 polyamine oxidase
Probab=96.89 E-value=0.00089 Score=77.38 Aligned_cols=42 Identities=26% Similarity=0.419 Sum_probs=37.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCC-eEEEEeccCCCcccccCCCccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGF-KTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~-~V~liek~~~~~~~~~~GG~~~ 436 (866)
..+||+|||||++||+||.+|++.|. +|+|+|++ ..+||.+.
T Consensus 25 ~~~~v~IIGaG~sGL~aa~~L~~~g~~~v~vlE~~------~~~GG~~~ 67 (487)
T PLN02676 25 PSPSVIIVGAGMSGISAAKTLSEAGIEDILILEAT------DRIGGRMR 67 (487)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEecCC------CCCCCcce
Confidence 45899999999999999999999998 69999998 67788653
No 460
>PRK09897 hypothetical protein; Provisional
Probab=96.85 E-value=0.014 Score=67.68 Aligned_cols=99 Identities=18% Similarity=0.249 Sum_probs=67.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcCCCcc-----------------------cHHHH-----------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNFLNTV-----------------------DEEIA----------- 614 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~l~~~-----------------------d~~~~----------- 614 (866)
++|+|||+|+.|+-++..|.+.+. +|++++++..+.... ++.+.
T Consensus 2 ~~IAIIGgGp~Gl~~a~~L~~~~~~l~V~lfEp~~~~G~G~ays~~~~~~~L~~N~~~~~~p~~~~~f~~Wl~~~~~~~~ 81 (534)
T PRK09897 2 KKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSHL 81 (534)
T ss_pred CeEEEECCcHHHHHHHHHHHhcCCCCcEEEEecCCCCCcceeecCCCChHHHHhcccccccCCChHHHHHHhhhhhHHHH
Confidence 579999999999999999987654 799998755332110 01111
Q ss_pred -----------------------------HHHHHHHHHcC--CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 615 -----------------------------KKAFHLLNKQG--LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 615 -----------------------------~~l~~~l~~~G--V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
+.+.+.+.+.| +.++.+++|++++..++++.+.+. .++. .+.
T Consensus 82 ~~~g~~~~~l~~~~f~PR~l~G~YL~~~f~~l~~~a~~~G~~V~v~~~~~V~~I~~~~~g~~V~t~-~gg~------~i~ 154 (534)
T PRK09897 82 QRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATN-QDLP------SET 154 (534)
T ss_pred HhcCCcceeecCCccCCeecchHHHHHHHHHHHHHHHHcCCeEEEEECCEEEEEEEeCCEEEEEEC-CCCe------EEE
Confidence 11122333455 678889999999888777766553 1233 789
Q ss_pred ccEEEEeeccccC
Q psy9583 664 FDKLLIAIGRIPN 676 (866)
Q Consensus 664 ~D~vi~a~G~~p~ 676 (866)
+|.||+|+|..+.
T Consensus 155 aD~VVLAtGh~~p 167 (534)
T PRK09897 155 FDLAVIATGHVWP 167 (534)
T ss_pred cCEEEECCCCCCC
Confidence 9999999997543
No 461
>PRK06996 hypothetical protein; Provisional
Probab=96.85 E-value=0.01 Score=67.13 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=75.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcC----CcEEEEecCCcCCC--------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLG----SEVTILEMSSNFLN-------------------------------------- 607 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g----~~Vtli~~~~~~l~-------------------------------------- 607 (866)
..+|+|||||+.|+-+|..|++.| .+|+++++.+..-.
T Consensus 11 ~~dv~IvGgGpaG~~~A~~L~~~g~~~g~~v~l~e~~~~~~~~~~~r~~~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~ 90 (398)
T PRK06996 11 DFDIAIVGAGPVGLALAGWLARRSATRALSIALIDAREPAASANDPRAIALSHGSRVLLETLGAWPADATPIEHIHVSQR 90 (398)
T ss_pred CCCEEEECcCHHHHHHHHHHhcCCCcCCceEEEecCCCCCcCCCCceEEEecHHHHHHHHhCCCchhcCCcccEEEEecC
Confidence 457999999999999999999987 46999987531000
Q ss_pred ----------------c----c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 608 ----------------T----V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 608 ----------------~----~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
. . -.++.+.+.+.+++.|++++.++++++++.+++++.+.+.+.+|. .++.+|+
T Consensus 91 ~~~g~~~~~~~~~~~~~~g~~v~r~~l~~~L~~~~~~~g~~~~~~~~v~~~~~~~~~v~v~~~~~~g~-----~~i~a~l 165 (398)
T PRK06996 91 GHFGRTLIDRDDHDVPALGYVVRYGSLVAALARAVRGTPVRWLTSTTAHAPAQDADGVTLALGTPQGA-----RTLRARI 165 (398)
T ss_pred CCCceEEecccccCCCcCEEEEEhHHHHHHHHHHHHhCCCEEEcCCeeeeeeecCCeEEEEECCCCcc-----eEEeeeE
Confidence 0 0 034566667777888999999999999988888888877533331 3799999
Q ss_pred EEEeeccc
Q psy9583 667 LLIAIGRI 674 (866)
Q Consensus 667 vi~a~G~~ 674 (866)
||-|.|..
T Consensus 166 vIgADG~~ 173 (398)
T PRK06996 166 AVQAEGGL 173 (398)
T ss_pred EEECCCCC
Confidence 99999953
No 462
>PRK06126 hypothetical protein; Provisional
Probab=96.84 E-value=0.013 Score=69.20 Aligned_cols=103 Identities=15% Similarity=0.212 Sum_probs=73.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-----------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT----------------------------------------- 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 608 (866)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.....
T Consensus 7 ~~~VlIVGaGpaGL~~Al~La~~G~~v~viEr~~~~~~~~ra~~l~~r~~e~L~~lGl~~~l~~~g~~~~~~~~~~~~~~ 86 (545)
T PRK06126 7 ETPVLIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKANTTSARSMEHFRRLGIADEVRSAGLPVDYPTDIAYFTR 86 (545)
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCccccCCHHHHHHHHhcChHHHHHhhcCCccccCCceEEec
Confidence 467999999999999999999999999999875421100
Q ss_pred ----------c--------------------------c-HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEee
Q psy9583 609 ----------V--------------------------D-EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSN 650 (866)
Q Consensus 609 ----------~--------------------------d-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~ 650 (866)
+ + ..+...+.+.+++ .|+++++++.+++++.+++++.+.+.+
T Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~~~~~~~v~i~~~~~v~~i~~~~~~v~v~~~~ 166 (545)
T PRK06126 87 LTGYELARFRLPSAREAITPVGGPDGSWPSPELPHRIPQKYLEPILLEHAAAQPGVTLRYGHRLTDFEQDADGVTATVED 166 (545)
T ss_pred CCCceeeeeecCCcCcccccccccccccCCCCccccCCHHHHHHHHHHHHHhCCCceEEeccEEEEEEECCCeEEEEEEE
Confidence 0 0 0012223333333 489999999999999888777777654
Q ss_pred -CCCCccceeEEEeccEEEEeeccccC
Q psy9583 651 -KSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 651 -~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+|. ..++.+|.||.|.|....
T Consensus 167 ~~~g~----~~~i~ad~vVgADG~~S~ 189 (545)
T PRK06126 167 LDGGE----SLTIRADYLVGCDGARSA 189 (545)
T ss_pred CCCCc----EEEEEEEEEEecCCcchH
Confidence 2332 347899999999997653
No 463
>PLN02697 lycopene epsilon cyclase
Probab=96.83 E-value=0.012 Score=68.28 Aligned_cols=97 Identities=19% Similarity=0.272 Sum_probs=70.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 608 (866)
-.|+|||+|+.|+-+|..+++.|.+|.++++...+...
T Consensus 109 ~DVvIVGaGPAGLalA~~Lak~Gl~V~LIe~~~p~~~n~GvW~~~l~~lgl~~~i~~~w~~~~v~~~~~~~~~~~~~Yg~ 188 (529)
T PLN02697 109 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFKDLGLEDCIEHVWRDTIVYLDDDKPIMIGRAYGR 188 (529)
T ss_pred ccEEEECcCHHHHHHHHHHHhCCCcEEEecCcccCCCccccchhHHHhcCcHHHHHhhcCCcEEEecCCceeeccCcccE
Confidence 46999999999999999999999999999864332110
Q ss_pred c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 609 V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 609 ~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+ ...+.+.+.+.+.+.|+++ .++.|+++..+++++.+... .+|. ++.++.||.|+|..+
T Consensus 189 V~R~~L~~~Ll~~a~~~GV~~-~~~~V~~I~~~~~~~~vv~~-~dG~------~i~A~lVI~AdG~~S 248 (529)
T PLN02697 189 VSRTLLHEELLRRCVESGVSY-LSSKVDRITEASDGLRLVAC-EDGR------VIPCRLATVASGAAS 248 (529)
T ss_pred EcHHHHHHHHHHHHHhcCCEE-EeeEEEEEEEcCCcEEEEEE-cCCc------EEECCEEEECCCcCh
Confidence 0 0122344555566779998 57899999876665543332 2454 799999999999876
No 464
>PF13533 Biotin_lipoyl_2: Biotin-lipoyl like
Probab=96.82 E-value=0.0013 Score=49.72 Aligned_cols=29 Identities=17% Similarity=0.259 Sum_probs=26.4
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecc
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDK 44 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k 44 (866)
..|+|.+|+|++||.|++||+|+++++..
T Consensus 9 ~~G~V~~v~V~~G~~VkkGd~L~~ld~~~ 37 (50)
T PF13533_consen 9 VSGRVESVYVKEGQQVKKGDVLLVLDSPD 37 (50)
T ss_pred CCEEEEEEEecCCCEEcCCCEEEEECcHH
Confidence 46999999999999999999999998753
No 465
>KOG2404|consensus
Probab=96.82 E-value=0.0043 Score=64.24 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=33.7
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
-|||||+|.|||+|+..+...|-.|+|+|+. ..+||..
T Consensus 11 pvvVIGgGLAGLsasn~iin~gg~V~llek~------~s~GGNS 48 (477)
T KOG2404|consen 11 PVVVIGGGLAGLSASNDIINKGGIVILLEKA------GSIGGNS 48 (477)
T ss_pred cEEEECCchhhhhhHHHHHhcCCeEEEEecc------CCcCCcc
Confidence 4999999999999999999998889999998 5677654
No 466
>PRK06185 hypothetical protein; Provisional
Probab=96.81 E-value=0.016 Score=65.70 Aligned_cols=102 Identities=21% Similarity=0.299 Sum_probs=71.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-----cc-----------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-----TV----------------------------------- 609 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-----~~----------------------------------- 609 (866)
..+|+|||||++|+-+|..|++.|.+|+++++.+.... .+
T Consensus 6 ~~dV~IvGgG~~Gl~~A~~La~~G~~v~liE~~~~~~~~~r~~~l~~~s~~~L~~lG~~~~~~~~~~~~~~~~~~~~~~~ 85 (407)
T PRK06185 6 TTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHADFLRDFRGDTVHPSTLELMDELGLLERFLELPHQKVRTLRFEIGGR 85 (407)
T ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCccCccccCceeChhHHHHHHHcCChhHHhhcccceeeeEEEEECCe
Confidence 35799999999999999999999999999997642100 00
Q ss_pred ---------------------cHHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccE
Q psy9583 610 ---------------------DEEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 610 ---------------------d~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~ 666 (866)
...+.+.+.+.+.+ .|++++.++.++++..+++.+. +.+...+|. .++.+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~~~v~i~~~~~v~~~~~~~~~v~~v~~~~~~g~-----~~i~a~~ 160 (407)
T PRK06185 86 TVTLADFSRLPTPYPYIAMMPQWDFLDFLAEEASAYPNFTLRMGAEVTGLIEEGGRVTGVRARTPDGP-----GEIRADL 160 (407)
T ss_pred EEEecchhhcCCCCCcEEEeehHHHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEcCCCc-----EEEEeCE
Confidence 01122333344444 4899999999999987766543 444433442 3789999
Q ss_pred EEEeeccccC
Q psy9583 667 LLIAIGRIPN 676 (866)
Q Consensus 667 vi~a~G~~p~ 676 (866)
||.|.|....
T Consensus 161 vI~AdG~~S~ 170 (407)
T PRK06185 161 VVGADGRHSR 170 (407)
T ss_pred EEECCCCchH
Confidence 9999998653
No 467
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=96.81 E-value=0.011 Score=66.40 Aligned_cols=100 Identities=15% Similarity=0.274 Sum_probs=71.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC--cCCC---------cccH-------------H--------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS--NFLN---------TVDE-------------E-------------- 612 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~--~~l~---------~~d~-------------~-------------- 612 (866)
-+|+|||||+.|+-+|..|++.|.+|+++++.+ .+.. .+.+ .
T Consensus 4 ~dv~IvGgG~aGl~~A~~L~~~G~~v~l~E~~~~~~~~~~~~~~~r~~~l~~~~~~~L~~lG~~~~~~~~~~~~~~~~~~ 83 (384)
T PRK08849 4 YDIAVVGGGMVGAATALGFAKQGRSVAVIEGGEPKAFEPSQPMDIRVSAISQTSVDLLESLGAWSSIVAMRVCPYKRLET 83 (384)
T ss_pred ccEEEECcCHHHHHHHHHHHhCCCcEEEEcCCCcccCCCCCCCCccEEEecHHHHHHHHHCCCchhhhHhhCCccceEEE
Confidence 369999999999999999999999999999764 1000 0000 0
Q ss_pred ----------------------------HHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 613 ----------------------------IAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 613 ----------------------------~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
+...+.+.+.+ .|++++.++++++++.+++++.+++. +|. ++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~l~~~L~~~~~~~~~i~i~~~~~v~~~~~~~~~~~v~~~--~g~------~~~ 155 (384)
T PRK08849 84 WEHPECRTRFHSDELNLDQLGYIVENRLIQLGLWQQFAQYPNLTLMCPEKLADLEFSAEGNRVTLE--SGA------EIE 155 (384)
T ss_pred EeCCCceEEecccccCCCccEEEEEcHHHHHHHHHHHHhCCCeEEECCCceeEEEEcCCeEEEEEC--CCC------EEE
Confidence 00011122222 37899999999999888777777775 565 899
Q ss_pred ccEEEEeeccccCCC
Q psy9583 664 FDKLLIAIGRIPNTN 678 (866)
Q Consensus 664 ~D~vi~a~G~~p~~~ 678 (866)
+|+||.|.|..+...
T Consensus 156 ~~lvIgADG~~S~vR 170 (384)
T PRK08849 156 AKWVIGADGANSQVR 170 (384)
T ss_pred eeEEEEecCCCchhH
Confidence 999999999877653
No 468
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.
Probab=96.81 E-value=0.001 Score=76.69 Aligned_cols=39 Identities=23% Similarity=0.467 Sum_probs=35.6
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+|+|||||++|++||..|++.|++|+|+|+. +.+||.+.
T Consensus 1 ~v~IiG~G~aGl~aA~~L~~~G~~v~v~E~~------~~~GG~~~ 39 (474)
T TIGR02732 1 KVAIVGAGLAGLSTAVELVDAGHEVDIYESR------SFIGGKVG 39 (474)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEec------CCCCceee
Confidence 5899999999999999999999999999998 67888653
No 469
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=96.80 E-value=0.013 Score=65.99 Aligned_cols=97 Identities=13% Similarity=0.225 Sum_probs=70.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc----c-------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT----V------------------------------------- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~----~------------------------------------- 609 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++.+..... +
T Consensus 8 ~dViIVGaG~~Gl~~A~~L~~~G~~v~liE~~~~~~~~r~~~l~~~s~~~l~~lgl~~~~~~~~~~~~~~~~~~~~g~~~ 87 (388)
T PRK07494 8 TDIAVIGGGPAGLAAAIALARAGASVALVAPEPPYADLRTTALLGPSIRFLERLGLWARLAPHAAPLQSMRIVDATGRLI 87 (388)
T ss_pred CCEEEECcCHHHHHHHHHHhcCCCeEEEEeCCCCCCCcchhhCcHHHHHHHHHhCchhhhHhhcceeeEEEEEeCCCCCC
Confidence 47999999999999999999999999999986432100 0
Q ss_pred ----------------------cHHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 610 ----------------------DEEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 610 ----------------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
...+.+.+.+.+.+. ++. ++++++++++.+++++.+++. +|. ++.+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~i~~~~l~~~L~~~~~~~~~~~-~~~~~v~~i~~~~~~~~v~~~--~g~------~~~a~~ 158 (388)
T PRK07494 88 RAPEVRFRAAEIGEDAFGYNIPNWLLNRALEARVAELPNIT-RFGDEAESVRPREDEVTVTLA--DGT------TLSARL 158 (388)
T ss_pred CCceEEEcHHhcCCCccEEEeEhHHHHHHHHHHHhcCCCcE-EECCeeEEEEEcCCeEEEEEC--CCC------EEEEeE
Confidence 011223334444444 455 778999999887777776654 554 789999
Q ss_pred EEEeeccccC
Q psy9583 667 LLIAIGRIPN 676 (866)
Q Consensus 667 vi~a~G~~p~ 676 (866)
||.|.|....
T Consensus 159 vI~AdG~~S~ 168 (388)
T PRK07494 159 VVGADGRNSP 168 (388)
T ss_pred EEEecCCCch
Confidence 9999998754
No 470
>KOG1298|consensus
Probab=96.79 E-value=0.0024 Score=67.74 Aligned_cols=33 Identities=33% Similarity=0.451 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||+|.+|.+.|..|++.|.+|.+|||+
T Consensus 45 ~~DvIIVGAGV~GsaLa~~L~kdGRrVhVIERD 77 (509)
T KOG1298|consen 45 AADVIIVGAGVAGSALAYALAKDGRRVHVIERD 77 (509)
T ss_pred cccEEEECCcchHHHHHHHHhhCCcEEEEEecc
Confidence 589999999999999999999999999999997
No 471
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in Escherichia coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase []. ; GO: 0008924 malate dehydrogenase (quinone) activity, 0006099 tricarboxylic acid cycle, 0055114 oxidation-reduction process
Probab=96.78 E-value=0.012 Score=64.99 Aligned_cols=69 Identities=20% Similarity=0.297 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCe-EEEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCe
Q psy9583 612 EIAKKAFHLLNKQ-GLNIILNTKIHDIKINKEN-VLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGL 687 (866)
Q Consensus 612 ~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~-~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl 687 (866)
.+.+.+.+.|.+. |++++++++|+.++..+++ +.+.+.+ .+|. ..++.++.|+++.|-..- .+ +..+|+
T Consensus 182 ~LTr~l~~~l~~~~~~~~~~~~eV~~i~r~~dg~W~v~~~~~~~~~----~~~v~a~FVfvGAGG~aL-~L--Lqksgi 253 (488)
T PF06039_consen 182 ALTRQLVEYLQKQKGFELHLNHEVTDIKRNGDGRWEVKVKDLKTGE----KREVRAKFVFVGAGGGAL-PL--LQKSGI 253 (488)
T ss_pred HHHHHHHHHHHhCCCcEEEecCEeCeeEECCCCCEEEEEEecCCCC----eEEEECCEEEECCchHhH-HH--HHHcCC
Confidence 4556666677777 9999999999999998776 7777753 1232 568999999999986532 22 466666
No 472
>PLN02464 glycerol-3-phosphate dehydrogenase
Probab=96.78 E-value=0.0013 Score=78.43 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=32.5
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+.|||+|||||..|+++|+.|+++|++|+|||++
T Consensus 70 ~~~DVvVIGGGi~Ga~~A~~lA~rGl~V~LvE~~ 103 (627)
T PLN02464 70 EPLDVLVVGGGATGAGVALDAATRGLRVGLVERE 103 (627)
T ss_pred CccCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 3599999999999999999999999999999997
No 473
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
Probab=96.77 E-value=0.0043 Score=70.31 Aligned_cols=91 Identities=26% Similarity=0.436 Sum_probs=71.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN 640 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 640 (866)
+++|+|||+|+-|+.+|..|++.|+.|+++++.+.... .++.++.+...+.|++.|++|++++.+-.
T Consensus 123 g~~VaviGaGPAGl~~a~~L~~~G~~Vtv~e~~~~~GGll~yGIP~~kl~k~i~d~~i~~l~~~Gv~~~~~~~vG~---- 198 (457)
T COG0493 123 GKKVAVIGAGPAGLAAADDLSRAGHDVTVFERVALDGGLLLYGIPDFKLPKDILDRRLELLERSGVEFKLNVRVGR---- 198 (457)
T ss_pred CCEEEEECCCchHhhhHHHHHhCCCeEEEeCCcCCCceeEEecCchhhccchHHHHHHHHHHHcCeEEEEcceECC----
Confidence 58999999999999999999999999999998877632 24678889999999999999999988731
Q ss_pred CCeEEEEEeeCCCCccceeEEEeccEEEEeecc-ccCC
Q psy9583 641 KENVLINYSNKSTNVKTEIITSIFDKLLIAIGR-IPNT 677 (866)
Q Consensus 641 ~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~-~p~~ 677 (866)
.++++ ....++|.|++++|. .|..
T Consensus 199 ----~it~~---------~L~~e~Dav~l~~G~~~~~~ 223 (457)
T COG0493 199 ----DITLE---------ELLKEYDAVFLATGAGKPRP 223 (457)
T ss_pred ----cCCHH---------HHHHhhCEEEEeccccCCCC
Confidence 12221 013345999999995 3443
No 474
>TIGR01790 carotene-cycl lycopene cyclase family protein. This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Probab=96.77 E-value=0.013 Score=65.89 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=68.5
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------------------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------- 608 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------- 608 (866)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 1 DviIiGaG~AGl~~A~~la~~g~~v~liE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (388)
T TIGR01790 1 DLAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHTYGVWDDDLSDLGLADCVEHVWPDVYEYRFPKQPRKLGTAYG 80 (388)
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEccCCCCCCCccccccHhhhhhhchhhHHhhcCCCceEEecCCcchhcCCcee
Confidence 4899999999999999999999999999976532100
Q ss_pred -c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEc-CCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 609 -V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKIN-KENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 609 -~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+ ...+.+.+.+.+.+.|++++ ...+..+..+ ++.+.+.+. +|. ++.++.||.|+|..+
T Consensus 81 ~i~~~~l~~~l~~~~~~~gv~~~-~~~v~~i~~~~~~~~~v~~~--~g~------~~~a~~VI~A~G~~s 141 (388)
T TIGR01790 81 SVDSTRLHEELLQKCPEGGVLWL-ERKAIHAEADGVALSTVYCA--GGQ------RIQARLVIDARGFGP 141 (388)
T ss_pred EEcHHHHHHHHHHHHHhcCcEEE-ccEEEEEEecCCceeEEEeC--CCC------EEEeCEEEECCCCch
Confidence 0 02233445555667788886 5578887766 444455443 554 799999999999876
No 475
>PRK15136 multidrug efflux system protein EmrA; Provisional
Probab=96.76 E-value=0.003 Score=70.80 Aligned_cols=35 Identities=9% Similarity=0.259 Sum_probs=32.1
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
..|.||.+|+|..+.+++|+.|..|++|+.+....
T Consensus 216 t~I~AP~dG~V~~~~v~~G~~V~~g~pl~~Iv~~~ 250 (390)
T PRK15136 216 TKIVSPMTGYVSRRSVQVGAQISPTTPLMAVVPAT 250 (390)
T ss_pred CEEECCCCeEEEEEecCCCCEeCCCCeEEEEEeCC
Confidence 47999999999999999999999999999997544
No 476
>KOG2852|consensus
Probab=96.75 E-value=0.012 Score=60.29 Aligned_cols=37 Identities=11% Similarity=0.211 Sum_probs=32.7
Q ss_pred hcccccceeeecCCccHHHHHHHHHHCC------CeEEEEecc
Q psy9583 386 IMNKNFDVIVIGAGPGGYVASIRLAQLG------FKTACIDEW 422 (866)
Q Consensus 386 ~m~~~~dVvIIGgG~AGl~aA~~L~~~g------~~V~liek~ 422 (866)
+|.+..+|+|+|||..|.++|+.|++.+ ..|+|||+.
T Consensus 6 r~~nsk~I~IvGGGIiGvctayyLt~~~sf~~~~~~ItifEs~ 48 (380)
T KOG2852|consen 6 REGNSKKIVIVGGGIIGVCTAYYLTEHPSFKKGELDITIFESK 48 (380)
T ss_pred ccCCceEEEEECCCceeeeeehhhhcCCccCCCceeEEEEeec
Confidence 3445689999999999999999999986 789999986
No 477
>TIGR02023 BchP-ChlP geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).
Probab=96.75 E-value=0.019 Score=64.63 Aligned_cols=104 Identities=21% Similarity=0.248 Sum_probs=70.6
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecC-CcCC-----------Cc-------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMS-SNFL-----------NT------------------------------- 608 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~-~~~l-----------~~------------------------------- 608 (866)
+|+|||||+.|+-+|..|++.|.+|.++++. +... ..
T Consensus 2 DVvIVGaGpAG~~aA~~La~~G~~V~l~E~~~~~~~~cg~~i~~~~l~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
T TIGR02023 2 DVAVIGGGPSGATAAETLARAGIETILLERALSNIKPCGGAIPPCLIEEFDIPDSLIDRRVTQMRMISPSRVPIKVTIPS 81 (388)
T ss_pred eEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCcCcCcCCcCHhhhhhcCCchHHHhhhcceeEEEcCCCceeeeccCC
Confidence 5899999999999999999999999999986 2110 00
Q ss_pred -------cc-HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 609 -------VD-EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 609 -------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
++ ..+-+.+.+...+.|++++.+ .++++..+++.+.+.+...+....++..++.+|.||.|.|....
T Consensus 82 ~~~~~~~~~r~~fd~~L~~~a~~~G~~v~~~-~v~~v~~~~~~~~v~~~~~~~~~~~~~~~i~a~~VI~AdG~~S~ 156 (388)
T TIGR02023 82 EDGYVGMVRREVFDSYLRERAQKAGAELIHG-LFLKLERDRDGVTLTYRTPKKGAGGEKGSVEADVVIGADGANSP 156 (388)
T ss_pred CCCceEeeeHHHHHHHHHHHHHhCCCEEEee-EEEEEEEcCCeEEEEEEeccccCCCcceEEEeCEEEECCCCCcH
Confidence 00 112233445556679999755 68888877777777765310000011247999999999997653
No 478
>TIGR00275 flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae.
Probab=96.75 E-value=0.012 Score=66.43 Aligned_cols=93 Identities=25% Similarity=0.361 Sum_probs=67.5
Q ss_pred EEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc---------------------------------------------
Q psy9583 574 CIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT--------------------------------------------- 608 (866)
Q Consensus 574 vVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~--------------------------------------------- 608 (866)
+|||||..|+-+|..+++.|.+|+++++++.+...
T Consensus 1 vIIGgG~aGl~aAi~aa~~G~~V~llEk~~~~G~k~~~sG~grcn~tn~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~ 80 (400)
T TIGR00275 1 IIIGGGAAGLMAAITAAREGLSVLLLEKNKKIGKKLLISGGGRCNLTNSCPTPEFVAYYPRNGKFLRSALSRFSNKDLID 80 (400)
T ss_pred CEEEEeHHHHHHHHHHHhcCCcEEEEecCccccccccccCCceEEccCCCcchhHHHhcCCCcHHHHHHHHhCCHHHHHH
Confidence 58899999999999999888889888876543110
Q ss_pred ----------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 609 ----------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 609 ----------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
...++.+.+.+.+++.|+++++++.++++..+++.+.+.. ++. .+.+|.
T Consensus 81 ~~~~~Gv~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~~v~~---~~~------~i~ad~ 151 (400)
T TIGR00275 81 FFESLGLELKVEEDGRVFPCSDSAADVLDALLNELKELGVEILTNSKVKSIKKDDNGFGVET---SGG------EYEADK 151 (400)
T ss_pred HHHHcCCeeEEecCCEeECCCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEecCCeEEEEE---CCc------EEEcCE
Confidence 0122344455667778999999999999987666555444 333 688999
Q ss_pred EEEeecccc
Q psy9583 667 LLIAIGRIP 675 (866)
Q Consensus 667 vi~a~G~~p 675 (866)
||+|+|...
T Consensus 152 VIlAtG~~s 160 (400)
T TIGR00275 152 VILATGGLS 160 (400)
T ss_pred EEECCCCcc
Confidence 999999754
No 479
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=96.73 E-value=0.015 Score=66.04 Aligned_cols=99 Identities=12% Similarity=0.253 Sum_probs=71.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecC-CcCC-------C--ccc-------------H----------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS-SNFL-------N--TVD-------------E---------------- 611 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~-~~~l-------~--~~d-------------~---------------- 611 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++. +... . .+. +
T Consensus 5 ~dV~IvGaG~~Gl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~~r~~~l~~~~~~~L~~lGl~~~l~~~~~~~~~~~~~~ 84 (405)
T PRK08850 5 VDVAIIGGGMVGLALAAALKESDLRIAVIEGQLPEEALNELPDVRVSALSRSSEHILRNLGAWQGIEARRAAPYIAMEVW 84 (405)
T ss_pred CCEEEECccHHHHHHHHHHHhCCCEEEEEcCCCCcccccCCCCcceecccHHHHHHHHhCCchhhhhhhhCCcccEEEEE
Confidence 57999999999999999999999999999985 1100 0 000 0
Q ss_pred ---------------------------HHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 612 ---------------------------EIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 612 ---------------------------~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
.+...+.+.+.+ .|++++.++++++++.+++.+.+.+. +|+ ++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~v~~~--~g~------~~~ 156 (405)
T PRK08850 85 EQDSFARIEFDAESMAQPDLGHIVENRVIQLALLEQVQKQDNVTLLMPARCQSIAVGESEAWLTLD--NGQ------ALT 156 (405)
T ss_pred eCCCCceEEEeccccCCCccEEEEEHHHHHHHHHHHHhcCCCeEEEcCCeeEEEEeeCCeEEEEEC--CCC------EEE
Confidence 011222333333 47899999999999887777777664 565 799
Q ss_pred ccEEEEeeccccCC
Q psy9583 664 FDKLLIAIGRIPNT 677 (866)
Q Consensus 664 ~D~vi~a~G~~p~~ 677 (866)
+|+||.|.|.....
T Consensus 157 a~lvIgADG~~S~v 170 (405)
T PRK08850 157 AKLVVGADGANSWL 170 (405)
T ss_pred eCEEEEeCCCCChh
Confidence 99999999976543
No 480
>PRK10015 oxidoreductase; Provisional
Probab=96.71 E-value=0.019 Score=65.47 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=69.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC------------------Ccc-----------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL------------------NTV----------------------- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l------------------~~~----------------------- 609 (866)
-.|+|||||+.|+-+|..|++.|.+|.++++.+.+. +.+
T Consensus 6 ~DViIVGgGpAG~~aA~~LA~~G~~VlliEr~~~~g~k~~~gg~i~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (429)
T PRK10015 6 FDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFLTEESA 85 (429)
T ss_pred cCEEEECcCHHHHHHHHHHHhCCCeEEEEecCCCCCcccccCceeecccHHHHcccccccCCccccccceeEEEEeCCCc
Confidence 369999999999999999999999999998754320 000
Q ss_pred ---------------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEE
Q psy9583 610 ---------------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLL 668 (866)
Q Consensus 610 ---------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi 668 (866)
-..+-+.+.+.+++.|++++.+++|+.+..+++.+..... ++. ++.+|.||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~R~~fd~~L~~~a~~~Gv~i~~~~~V~~i~~~~~~v~~v~~--~~~------~i~A~~VI 157 (429)
T PRK10015 86 VTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQA--GDD------ILEANVVI 157 (429)
T ss_pred eEeecccCCCCCCCcCceEeehhHHHHHHHHHHHHcCCEEECCcEEEEEEEeCCEEEEEEe--CCe------EEECCEEE
Confidence 0111223556667789999999999998876555543222 222 79999999
Q ss_pred Eeecccc
Q psy9583 669 IAIGRIP 675 (866)
Q Consensus 669 ~a~G~~p 675 (866)
.|.|...
T Consensus 158 ~AdG~~s 164 (429)
T PRK10015 158 LADGVNS 164 (429)
T ss_pred EccCcch
Confidence 9999754
No 481
>KOG2853|consensus
Probab=96.70 E-value=0.041 Score=57.75 Aligned_cols=49 Identities=22% Similarity=0.519 Sum_probs=38.0
Q ss_pred ccceeeecCCccHHHHHHHHHHC----CCeEEEEeccCCCcccc---cCCCcccee
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL----GFKTACIDEWKDNEENF---ALGGTCTNV 438 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~----g~~V~liek~~~~~~~~---~~GG~~~~~ 438 (866)
+.||+|||||-.|.+.|.-|+++ |++|+++|+++.-..+. ..||.|...
T Consensus 86 ~~dVvIIGGG~~GsS~AfWLKer~rd~gl~VvVVErddtytqssT~lSvGGi~QQF 141 (509)
T KOG2853|consen 86 HCDVVIIGGGGSGSSTAFWLKERARDEGLNVVVVERDDTYTQSSTMLSVGGICQQF 141 (509)
T ss_pred ccCEEEECCCccchhhHHHHHHHhhcCCceEEEEeccCcccccceeeeecceeeec
Confidence 58999999999999999988765 79999999985322222 248888544
No 482
>KOG0685|consensus
Probab=96.69 E-value=0.0017 Score=71.14 Aligned_cols=41 Identities=29% Similarity=0.498 Sum_probs=35.8
Q ss_pred cccceeeecCCccHHHHHHHHHHCC-CeEEEEeccCCCcccccCCCcc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~~~~~~~~~GG~~ 435 (866)
...+|||||||.||++||.+|.+.| .+++|+|.. +++||..
T Consensus 20 ~~~kIvIIGAG~AGLaAA~rLle~gf~~~~IlEa~------dRIGGRI 61 (498)
T KOG0685|consen 20 GNAKIVIIGAGIAGLAAATRLLENGFIDVLILEAS------DRIGGRI 61 (498)
T ss_pred CCceEEEECCchHHHHHHHHHHHhCCceEEEEEec------cccCceE
Confidence 3568999999999999999999876 579999998 7888865
No 483
>PF01597 GCV_H: Glycine cleavage H-protein; InterPro: IPR002930 This is a family of glycine cleavage H-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. A lipoyl group is attached to a completely conserved lysine residue. The H protein shuttles the methylamine group of glycine from the P protein to the T protein [].; GO: 0006546 glycine catabolic process, 0005960 glycine cleavage complex; PDB: 3KLR_A 2EDG_A 1ONL_B 2KA7_A 1ZKO_A 3TZU_C 3MXU_A 3A8I_F 3A8J_E 3A7A_B ....
Probab=96.68 E-value=0.0038 Score=57.25 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=32.3
Q ss_pred eCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeec
Q psy9583 25 KKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT 63 (866)
Q Consensus 25 ~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~ 63 (866)
.++|+.|++|++++.||+.|.+.++.||.+|+|.++.-+
T Consensus 39 p~~g~~~~~g~~~~~ies~k~~~~l~sPvsG~Vv~vN~~ 77 (122)
T PF01597_consen 39 PKVGTKLKKGDPFASIESSKAVSDLYSPVSGTVVEVNEE 77 (122)
T ss_dssp B-TT-EE-TTSEEEEEEESSEEEEEEESSSEEEEEE-GH
T ss_pred ccCCCEEecCCcEEEEEECceeeecccceEEEEEEEccc
Confidence 466999999999999999999999999999999987543
No 484
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=96.68 E-value=0.019 Score=64.76 Aligned_cols=98 Identities=20% Similarity=0.338 Sum_probs=70.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhc---CCcEEEEecCCcC---CC--------------------cc-c-------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL---GSEVTILEMSSNF---LN--------------------TV-D------------- 610 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~---g~~Vtli~~~~~~---l~--------------------~~-d------------- 610 (866)
-+|+|||+|+.|+-+|..|++. |.+|+++++.... .+ .+ +
T Consensus 4 ~dv~IvGaG~aGl~~A~~L~~~~~~G~~v~v~E~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~ 83 (395)
T PRK05732 4 MDVIIVGGGMAGATLALALSRLSHGGLPVALIEAFAPESDAHPGFDARAIALAAGTCQQLARLGVWQALADCATPITHIH 83 (395)
T ss_pred CCEEEECcCHHHHHHHHHhhhcccCCCEEEEEeCCCcccccCCCCCccceeccHHHHHHHHHCCChhhhHhhcCCccEEE
Confidence 3689999999999999999998 9999999984110 00 00 0
Q ss_pred ----------------------------HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEE
Q psy9583 611 ----------------------------EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIIT 661 (866)
Q Consensus 611 ----------------------------~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~ 661 (866)
.++.+.+.+.+.+ .|++++.+++++++..+++++.+++. ++. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~~~v~~i~~~~~~~~v~~~--~g~------~ 155 (395)
T PRK05732 84 VSDRGHAGFVRLDAEDYGVPALGYVVELHDVGQRLFALLDKAPGVTLHCPARVANVERTQGSVRVTLD--DGE------T 155 (395)
T ss_pred EecCCCCceEEeehhhcCCCccEEEEEhHHHHHHHHHHHhcCCCcEEEcCCEEEEEEEcCCeEEEEEC--CCC------E
Confidence 0111223333444 47999999999999877777776654 454 7
Q ss_pred EeccEEEEeeccccC
Q psy9583 662 SIFDKLLIAIGRIPN 676 (866)
Q Consensus 662 ~~~D~vi~a~G~~p~ 676 (866)
+.+|.||.|.|....
T Consensus 156 ~~a~~vI~AdG~~S~ 170 (395)
T PRK05732 156 LTGRLLVAADGSHSA 170 (395)
T ss_pred EEeCEEEEecCCChh
Confidence 899999999998764
No 485
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=96.67 E-value=0.0014 Score=77.24 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=32.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+..+|+|||||++|+++|..|++.|++|+|||+.
T Consensus 80 ~~~~VlIVGgGIaGLalAlaL~r~Gi~V~V~Er~ 113 (668)
T PLN02927 80 KKSRVLVAGGGIGGLVFALAAKKKGFDVLVFEKD 113 (668)
T ss_pred CCCCEEEECCCHHHHHHHHHHHhcCCeEEEEecc
Confidence 4589999999999999999999999999999996
No 486
>PRK09578 periplasmic multidrug efflux lipoprotein precursor; Reviewed
Probab=96.67 E-value=0.0037 Score=70.24 Aligned_cols=65 Identities=18% Similarity=0.315 Sum_probs=55.8
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecc---------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDK--------------------------------------------------- 44 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k--------------------------------------------------- 44 (866)
..|+|.++++++||.|++||+|+.+++.-
T Consensus 70 v~G~V~~v~v~~Gd~VkkGq~La~ld~~~~~~~~~~a~a~l~~a~a~l~~a~~~~~R~~~L~~~~~iS~~~~~~~~~~~~ 149 (385)
T PRK09578 70 VAGIVTARTYEEGQEVKQGAVLFRIDPAPLKAARDAAAGALAKAEAAHLAALDKRRRYDDLVRDRAVSERDYTEAVADER 149 (385)
T ss_pred CcEEEEEEECCCCCEEcCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 46999999999999999999999998631
Q ss_pred --------------------eeeEEecCCCeEEEEEeecCCCEEecC--CEEEEEecC
Q psy9583 45 --------------------VILELPAPQDGIINKIIITDGSIVTSN--QVIALIDTD 80 (866)
Q Consensus 45 --------------------~~~~i~~~~~G~~~~~~~~~g~~v~~g--~~l~~~~~~ 80 (866)
....|.||++|+|.+.++++|+.|.+| ++|+.+...
T Consensus 150 ~a~a~~~~a~a~l~~a~~~l~~~~I~AP~dGvV~~~~v~~G~~V~~g~~~~l~~i~~~ 207 (385)
T PRK09578 150 QAKAAVASAKAELARAQLQLDYATVTAPIDGRARRALVTEGALVGQDQATPLTTVEQL 207 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEECCCCeEEEeeecCCCCeecCCCCcceEEEEec
Confidence 013799999999999999999999996 588888643
No 487
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ]. These enzymes include a variety of proteins; choline dehydrogenase (CHD), methanol oxidase (MOX) and cellobiose dehydrogenase (1.1.99.18 from EC) [] which share a number of regions of sequence similarities. One of these regions, located in the N-terminal section, corresponds to the FAD ADP- binding domain. The function of the other conserved domains is not yet known.; GO: 0016614 oxidoreductase activity, acting on CH-OH group of donors, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 3Q9T_B 1B4V_A 3GYJ_A 1CBO_A 1B8S_A 1N4V_A 1N4W_A 3CNJ_A 1IJH_A 2GEW_A ....
Probab=96.66 E-value=0.0012 Score=71.27 Aligned_cols=71 Identities=13% Similarity=0.226 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCCEEEeCceEEEEEEc--CCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCe
Q psy9583 613 IAKKAFHLLNKQGLNIILNTKIHDIKIN--KENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGL 687 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl 687 (866)
...++...++..|++|++++.|++|..+ +... -|.+...++. .....+.++.||+|.|.--...+ |..+|+
T Consensus 195 ~~~~L~~a~~~~n~~l~~~~~V~~i~~~~~~~~a~gV~~~~~~~~--~~~~~~~ak~VIlaAGai~Tp~L--Ll~SGi 268 (296)
T PF00732_consen 195 ATTYLPPALKRPNLTLLTNARVTRIIFDGDGGRATGVEYVDNDGG--VQRRIVAAKEVILAAGAIGTPRL--LLRSGI 268 (296)
T ss_dssp HHHHHHHHTTTTTEEEEESEEEEEEEEETTSTEEEEEEEEETTTS--EEEEEEEEEEEEE-SHHHHHHHH--HHHTTE
T ss_pred hhcccchhhccCCccEEcCcEEEEEeeeccccceeeeeeeecCCc--ceeeeccceeEEeccCCCCChhh--hccccc
Confidence 3556666666669999999999999553 4433 3555544442 22356788999999997555555 344455
No 488
>PRK03598 putative efflux pump membrane fusion protein; Provisional
Probab=96.65 E-value=0.0035 Score=68.87 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=31.6
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
..|.||++|+|..+.+++|+.|..|++|+.|...
T Consensus 204 ~~I~AP~dG~V~~~~~~~G~~V~~G~~l~~I~~~ 237 (331)
T PRK03598 204 TELIAPSDGTILTRAVEPGTMLNAGSTVFTLSLT 237 (331)
T ss_pred CEEECCCCeEEEeccCCCCCCcCCCCeEEEEecC
Confidence 5799999999999999999999999999999754
No 489
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=96.64 E-value=0.018 Score=72.57 Aligned_cols=109 Identities=12% Similarity=0.131 Sum_probs=72.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc----------c-cHHHHHHHHHHHHHc-CCEEEeCceEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT----------V-DEEIAKKAFHLLNKQ-GLNIILNTKIHDI 637 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~----------~-d~~~~~~l~~~l~~~-GV~i~~~~~v~~i 637 (866)
..+|+|||||+.|+..|..+++.|.+|++++..+.+... . ..+....+.+.++.. +++++.++.|..+
T Consensus 163 ~~dVvIIGaGPAGLaAA~~aar~G~~V~liD~~~~~GG~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~v~v~~~t~V~~i 242 (985)
T TIGR01372 163 HCDVLVVGAGPAGLAAALAAARAGARVILVDEQPEAGGSLLSEAETIDGKPAADWAAATVAELTAMPEVTLLPRTTAFGY 242 (985)
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCCCeeeccccccCCccHHHHHHHHHHHHhcCCCcEEEcCCEEEEE
Confidence 468999999999999999999999999999987655321 1 123445566666666 5999999999887
Q ss_pred EEcCCeEEEE-Eee-----CCCCccceeEEEeccEEEEeeccccCCC
Q psy9583 638 KINKENVLIN-YSN-----KSTNVKTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 638 ~~~~~~~~v~-~~~-----~~g~~~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
...+....+. ... .++........+.+|.||+|||..|...
T Consensus 243 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~i~a~~VILATGa~~r~~ 289 (985)
T TIGR01372 243 YDHNTVGALERVTDHLDAPPKGVPRERLWRIRAKRVVLATGAHERPL 289 (985)
T ss_pred ecCCeEEEEEEeeeccccccCCccccceEEEEcCEEEEcCCCCCcCC
Confidence 5422111111 100 0111001123689999999999987654
No 490
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
Probab=96.63 E-value=0.021 Score=64.52 Aligned_cols=99 Identities=17% Similarity=0.178 Sum_probs=76.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC------------------ccc----------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------TVD---------------------- 610 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------~~d---------------------- 610 (866)
-.|+|||+|+.|+-+|..|++.|.+|.++++++.+.. .+.
T Consensus 4 ~DVvIVGaGPAGs~aA~~la~~G~~VlvlEk~~~~G~k~~~~~~~~~~~l~~l~~~~~~~i~~~v~~~~~~~~~~~~~~~ 83 (396)
T COG0644 4 YDVVIVGAGPAGSSAARRLAKAGLDVLVLEKGSEPGAKPCCGGGLSPRALEELIPDFDEEIERKVTGARIYFPGEKVAIE 83 (396)
T ss_pred eeEEEECCchHHHHHHHHHHHcCCeEEEEecCCCCCCCccccceechhhHHHhCCCcchhhheeeeeeEEEecCCceEEe
Confidence 3689999999999999999999999999998654311 010
Q ss_pred -----------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 611 -----------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 611 -----------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
..+-+++.+..++.|++++.++++..+..+++++.+.+...+ .++.++.||.|.|....
T Consensus 84 ~~~~~~y~v~R~~fd~~La~~A~~aGae~~~~~~~~~~~~~~~~~~~~~~~~~-------~e~~a~~vI~AdG~~s~ 153 (396)
T COG0644 84 VPVGEGYIVDRAKFDKWLAERAEEAGAELYPGTRVTGVIREDDGVVVGVRAGD-------DEVRAKVVIDADGVNSA 153 (396)
T ss_pred cCCCceEEEEhHHhhHHHHHHHHHcCCEEEeceEEEEEEEeCCcEEEEEEcCC-------EEEEcCEEEECCCcchH
Confidence 123345666777899999999999999988877776665322 38999999999996543
No 491
>PLN02487 zeta-carotene desaturase
Probab=96.61 E-value=0.0019 Score=75.44 Aligned_cols=40 Identities=25% Similarity=0.471 Sum_probs=36.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
.++|+|||||++|+++|..|++.|++|+|+|+. +.+||.+
T Consensus 75 ~~~v~iiG~G~~Gl~~a~~L~~~g~~v~i~E~~------~~~gG~~ 114 (569)
T PLN02487 75 KLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR------PFIGGKV 114 (569)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeeEEEecC------CCCCCce
Confidence 368999999999999999999999999999998 6778755
No 492
>PLN02328 lysine-specific histone demethylase 1 homolog
Probab=96.61 E-value=0.0019 Score=77.69 Aligned_cols=34 Identities=35% Similarity=0.626 Sum_probs=32.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
..+|+|||||++|++||..|.+.|++|+|+|+..
T Consensus 238 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~v~E~~~ 271 (808)
T PLN02328 238 PANVVVVGAGLAGLVAARQLLSMGFKVVVLEGRA 271 (808)
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeccc
Confidence 4789999999999999999999999999999983
No 493
>TIGR02462 pyranose_ox pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation.
Probab=96.60 E-value=0.002 Score=74.57 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=31.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|||+|||+||+|+.+|..|++.|++|++||++
T Consensus 1 ~dv~ivg~Gp~G~~~a~~l~~~g~~v~~~e~~ 32 (544)
T TIGR02462 1 YDVFIAGSGPIGCTYARLCVDAGLKVAMVEIG 32 (544)
T ss_pred CcEEEECCchHHHHHHHHHHHCCCeEEEEecc
Confidence 69999999999999999999999999999998
No 494
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=96.60 E-value=0.0058 Score=72.34 Aligned_cols=90 Identities=26% Similarity=0.486 Sum_probs=66.4
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceE-EEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKI-HDIK 638 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v-~~i~ 638 (866)
.+++|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .++.++.+.-.+.+.+.|++++.++.+ ..+.
T Consensus 136 ~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~~~ 215 (564)
T PRK12771 136 TGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGEDIT 215 (564)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCcCC
Confidence 478999999999999999999999999999998765421 234555555566778899999988765 2221
Q ss_pred EcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 639 INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 639 ~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+. ....+|.|++|+|..+.
T Consensus 216 ~~~------------------~~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 216 LEQ------------------LEGEFDAVFVAIGAQLG 235 (564)
T ss_pred HHH------------------HHhhCCEEEEeeCCCCC
Confidence 100 01247999999998654
No 495
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=96.59 E-value=0.011 Score=67.10 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=68.6
Q ss_pred eEEEECCcHHHHHHHHHHHhcC-CcEEEEecCCcCCCc-----ccHH-------------H-------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLG-SEVTILEMSSNFLNT-----VDEE-------------I------------------- 613 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g-~~Vtli~~~~~~l~~-----~d~~-------------~------------------- 613 (866)
+|+|||||..|+-+|..|++.| .+|+++++.+.+... +.+. +
T Consensus 2 ~V~IiGgGiaGla~A~~L~~~g~~~v~v~Er~~~~~~~G~gi~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 81 (414)
T TIGR03219 2 RVAIIGGGIAGVALALNLCKHSHLNVQLFEAAPAFGEVGAGVSFGANAVRAIVGLGLGEAYTQVADSTPAPWQDIWFEWR 81 (414)
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCEEEEecCCcCCCCccceeeCccHHHHHHHcCChhHHHHHhcCCCccCcceeEEEE
Confidence 6899999999999999999998 599999987654210 0000 0
Q ss_pred ----------------------HHHHHHHHHHc--CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEE
Q psy9583 614 ----------------------AKKAFHLLNKQ--GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLI 669 (866)
Q Consensus 614 ----------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~ 669 (866)
...+.+.|.+. +..++++++|++++.+++++.+.+. +|. ++.+|.||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~R~~l~~~L~~~~~~~~v~~~~~v~~i~~~~~~~~v~~~--~g~------~~~ad~vVg 153 (414)
T TIGR03219 82 NGSDASYLGATIAPGVGQSSVHRADFLDALLKHLPEGIASFGKRATQIEEQAEEVQVLFT--DGT------EYRCDLLIG 153 (414)
T ss_pred ecCccceeeeeccccCCcccCCHHHHHHHHHHhCCCceEEcCCEEEEEEecCCcEEEEEc--CCC------EEEeeEEEE
Confidence 11122222221 3567889999999887777777665 565 789999999
Q ss_pred eeccccC
Q psy9583 670 AIGRIPN 676 (866)
Q Consensus 670 a~G~~p~ 676 (866)
|.|....
T Consensus 154 ADG~~S~ 160 (414)
T TIGR03219 154 ADGIKSA 160 (414)
T ss_pred CCCccHH
Confidence 9997654
No 496
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=96.55 E-value=0.026 Score=63.74 Aligned_cols=32 Identities=31% Similarity=0.629 Sum_probs=29.6
Q ss_pred eEEEECCcHHHHHHHHHHHhc--CCcEEEEecCC
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSS 603 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~ 603 (866)
+|+|||||.+|+-+|..|+++ |.+|+++++.+
T Consensus 4 dVvIIGgGi~G~s~A~~La~~~~g~~V~llE~~~ 37 (393)
T PRK11728 4 DFVIIGGGIVGLSTAMQLQERYPGARIAVLEKES 37 (393)
T ss_pred cEEEECCcHHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 689999999999999999999 99999999864
No 497
>PRK11445 putative oxidoreductase; Provisional
Probab=96.55 E-value=0.031 Score=62.00 Aligned_cols=100 Identities=13% Similarity=0.069 Sum_probs=70.2
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--------C-cccHHH-----------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--------N-TVDEEI----------------------------- 613 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--------~-~~d~~~----------------------------- 613 (866)
+|+|||+|+.|+-+|..|++. .+|+++++.+... . .+.+..
T Consensus 3 dV~IvGaGpaGl~~A~~La~~-~~V~liE~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~~~ 81 (351)
T PRK11445 3 DVAIIGLGPAGSALARLLAGK-MKVIAIDKKHQCGTEGFSKPCGGLLAPDAQKSFAKDGLTLPKDVIANPQIFAVKTIDL 81 (351)
T ss_pred eEEEECCCHHHHHHHHHHhcc-CCEEEEECCCccccccccCcCcCccCHHHHHHHHHcCCCCCcceeeccccceeeEecc
Confidence 589999999999999999998 9999999876320 0 000000
Q ss_pred ----------------HHHHHHH---HHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 614 ----------------AKKAFHL---LNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 614 ----------------~~~l~~~---l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
+..+.+. ..+.|++++.++.++.++.+++++.+.+.. +|. ..++.+|.||.|.|..
T Consensus 82 ~~~~~~~~~~~~~~i~R~~~~~~L~~~~~~gv~v~~~~~v~~i~~~~~~~~v~~~~-~g~----~~~i~a~~vV~AdG~~ 156 (351)
T PRK11445 82 ANSLTRNYQRSYINIDRHKFDLWLKSLIPASVEVYHNSLCRKIWREDDGYHVIFRA-DGW----EQHITARYLVGADGAN 156 (351)
T ss_pred cccchhhcCCCcccccHHHHHHHHHHHHhcCCEEEcCCEEEEEEEcCCEEEEEEec-CCc----EEEEEeCEEEECCCCC
Confidence 1111122 234689999999999998877777776632 342 2368999999999987
Q ss_pred cCC
Q psy9583 675 PNT 677 (866)
Q Consensus 675 p~~ 677 (866)
...
T Consensus 157 S~v 159 (351)
T PRK11445 157 SMV 159 (351)
T ss_pred cHH
Confidence 543
No 498
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=96.55 E-value=0.048 Score=62.26 Aligned_cols=137 Identities=21% Similarity=0.250 Sum_probs=87.2
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCc-EEEEecCCcCCCc------------------------c--------cHHHHHH
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNFLNT------------------------V--------DEEIAKK 616 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~l~~------------------------~--------d~~~~~~ 616 (866)
..+|+|||+|++|+-+|..|.+.|.. +.++++++.+... + -.++.++
T Consensus 8 ~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg~W~~~ry~~l~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~y 87 (443)
T COG2072 8 HTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGGTWRYNRYPGLRLDSPKWLLGFPFLPFRWDEAFAPFAEIKDY 87 (443)
T ss_pred cccEEEECCCHHHHHHHHHHHHcCCCcEEEEEccCCcCCcchhccCCceEECCchheeccCCCccCCcccCCCcccHHHH
Confidence 35799999999999999999999998 9999987633210 1 0236788
Q ss_pred HHHHHHHcCCEE--EeCceEEEEEEcC--CeEEEEEeeCCCCccceeEEEeccEEEEeecc--ccCCCCCCccccCeeec
Q psy9583 617 AFHLLNKQGLNI--ILNTKIHDIKINK--ENVLINYSNKSTNVKTEIITSIFDKLLIAIGR--IPNTNNLNIDKIGLKVN 690 (866)
Q Consensus 617 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~--~p~~~~l~l~~~gl~~~ 690 (866)
+...+++.++.. ..++.|+.+..+. ..+.+++. ++. ..++.+|.||+|+|. .|+.+-+ .|++.-
T Consensus 88 ~~~~~~~y~~~~~i~~~~~v~~~~~~~~~~~w~V~~~--~~~----~~~~~a~~vV~ATG~~~~P~iP~~----~G~~~f 157 (443)
T COG2072 88 IKDYLEKYGLRFQIRFNTRVEVADWDEDTKRWTVTTS--DGG----TGELTADFVVVATGHLSEPYIPDF----AGLDEF 157 (443)
T ss_pred HHHHHHHcCceeEEEcccceEEEEecCCCCeEEEEEc--CCC----eeeEecCEEEEeecCCCCCCCCCC----CCccCC
Confidence 888888877644 4455565555444 45667665 333 112779999999996 3333322 122221
Q ss_pred CCCcEEeC----CCCCCCCCCEEEecccCCC
Q psy9583 691 ENNFIIVN----DNCETNIPNIYAIGDVVRG 717 (866)
Q Consensus 691 ~~G~i~Vd----~~l~Ts~~~VyA~GD~a~~ 717 (866)
.|.+.-. +...-.-++|-.||--++.
T Consensus 158 -~g~~~HS~~~~~~~~~~GKrV~VIG~GaSA 187 (443)
T COG2072 158 -KGRILHSADWPNPEDLRGKRVLVIGAGASA 187 (443)
T ss_pred -CceEEchhcCCCccccCCCeEEEECCCccH
Confidence 3333222 1223355889999976653
No 499
>PRK07538 hypothetical protein; Provisional
Probab=96.54 E-value=0.027 Score=64.08 Aligned_cols=103 Identities=16% Similarity=0.236 Sum_probs=70.5
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---c--c-------------c-----------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---T--V-------------D----------------------- 610 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---~--~-------------d----------------------- 610 (866)
+|+|||||+.|+-+|..|++.|.+|+++++.+.+.+ . + .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~g~gi~l~p~~~~~L~~lgl~~~l~~~~~~~~~~~~~~~~g~~~ 81 (413)
T PRK07538 2 KVLIAGGGIGGLTLALTLHQRGIEVVVFEAAPELRPLGVGINLLPHAVRELAELGLLDALDAIGIRTRELAYFNRHGQRI 81 (413)
T ss_pred eEEEECCCHHHHHHHHHHHhCCCcEEEEEcCCcccccCcceeeCchHHHHHHHCCCHHHHHhhCCCCcceEEEcCCCCEE
Confidence 689999999999999999999999999998754211 0 0 0
Q ss_pred --------------------HHHHHHHHHHHHH-cC-CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEE
Q psy9583 611 --------------------EEIAKKAFHLLNK-QG-LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLL 668 (866)
Q Consensus 611 --------------------~~~~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi 668 (866)
..+.+.+.+.+.+ .| ..+++++++++++.+++++.+.+.+..+ ++..++.+|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~i~R~~l~~~L~~~~~~~~g~~~i~~~~~v~~~~~~~~~~~~~~~~~~~---g~~~~~~adlvI 158 (413)
T PRK07538 82 WSEPRGLAAGYDWPQYSIHRGELQMLLLDAVRERLGPDAVRTGHRVVGFEQDADVTVVFLGDRAG---GDLVSVRGDVLI 158 (413)
T ss_pred eeccCCcccCCCCceEEEEHHHHHHHHHHHHHhhcCCcEEEcCCEEEEEEecCCceEEEEeccCC---CccceEEeeEEE
Confidence 0111223333333 35 4699999999998877666555543211 113479999999
Q ss_pred EeeccccCC
Q psy9583 669 IAIGRIPNT 677 (866)
Q Consensus 669 ~a~G~~p~~ 677 (866)
-|-|.....
T Consensus 159 gADG~~S~v 167 (413)
T PRK07538 159 GADGIHSAV 167 (413)
T ss_pred ECCCCCHHH
Confidence 999986644
No 500
>PRK13984 putative oxidoreductase; Provisional
Probab=96.52 E-value=0.0092 Score=71.35 Aligned_cols=90 Identities=26% Similarity=0.385 Sum_probs=67.9
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
..++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .+..++.....+.+++.|++++.++.+..
T Consensus 282 ~~~~v~IIGaG~aGl~aA~~L~~~G~~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 358 (604)
T PRK13984 282 KNKKVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK--- 358 (604)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC---
Confidence 468899999999999999999999999999998875421 13455556666788899999999987732
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+ +.+. + ....+|.||+|+|..+
T Consensus 359 -~----~~~~--~-------~~~~yD~vilAtGa~~ 380 (604)
T PRK13984 359 -D----IPLE--E-------LREKHDAVFLSTGFTL 380 (604)
T ss_pred -c----CCHH--H-------HHhcCCEEEEEcCcCC
Confidence 0 1111 1 1346899999999763
Done!