Query psy9583
Match_columns 866
No_of_seqs 595 out of 5162
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 23:23:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9583.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9583hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dva_I Dihydrolipoyllysine-res 100.0 5.6E-82 1.9E-86 700.0 2.3 382 1-385 1-414 (428)
2 4b1b_A TRXR, thioredoxin reduc 100.0 3.3E-73 1.1E-77 655.7 42.6 456 390-859 42-524 (542)
3 3urh_A Dihydrolipoyl dehydroge 100.0 7.3E-70 2.5E-74 629.9 53.2 461 390-865 25-490 (491)
4 3lad_A Dihydrolipoamide dehydr 100.0 5.6E-70 1.9E-74 629.0 50.6 466 390-865 3-470 (476)
5 1ojt_A Surface protein; redox- 100.0 5.2E-68 1.8E-72 612.6 49.8 460 387-865 3-476 (482)
6 2qae_A Lipoamide, dihydrolipoy 100.0 1.2E-67 3.9E-72 608.1 52.0 461 390-865 2-467 (468)
7 1zmd_A Dihydrolipoyl dehydroge 100.0 4.7E-67 1.6E-71 603.9 50.4 459 390-865 6-473 (474)
8 3ic9_A Dihydrolipoamide dehydr 100.0 3.9E-67 1.3E-71 605.7 48.1 453 390-862 8-469 (492)
9 1dxl_A Dihydrolipoamide dehydr 100.0 6E-67 2.1E-71 602.9 49.2 462 389-865 5-469 (470)
10 1v59_A Dihydrolipoamide dehydr 100.0 1.5E-66 5.1E-71 600.7 50.9 464 387-865 2-477 (478)
11 2a8x_A Dihydrolipoyl dehydroge 100.0 1.1E-66 3.9E-71 599.1 48.8 457 390-865 3-463 (464)
12 1ebd_A E3BD, dihydrolipoamide 100.0 2.5E-66 8.7E-71 594.7 51.1 451 390-859 3-454 (455)
13 2eq6_A Pyruvate dehydrogenase 100.0 2.9E-66 9.9E-71 594.8 50.3 453 390-865 6-460 (464)
14 3l8k_A Dihydrolipoyl dehydroge 100.0 4.6E-66 1.6E-70 593.8 48.1 446 387-861 1-459 (466)
15 4dna_A Probable glutathione re 100.0 7.5E-66 2.6E-70 591.8 45.0 443 390-856 5-450 (463)
16 3dk9_A Grase, GR, glutathione 100.0 1.1E-65 3.8E-70 593.1 45.7 448 389-854 19-476 (478)
17 1xdi_A RV3303C-LPDA; reductase 100.0 5.4E-65 1.9E-69 590.0 50.1 456 390-861 2-466 (499)
18 2wpf_A Trypanothione reductase 100.0 2E-65 6.7E-70 591.6 46.1 455 387-857 4-476 (495)
19 1fec_A Trypanothione reductase 100.0 6.6E-65 2.2E-69 586.9 47.6 452 390-857 3-472 (490)
20 1ges_A Glutathione reductase; 100.0 2.4E-65 8.2E-70 584.9 43.2 443 387-854 1-448 (450)
21 2yqu_A 2-oxoglutarate dehydrog 100.0 9.1E-65 3.1E-69 581.8 48.1 453 391-865 2-454 (455)
22 1lvl_A Dihydrolipoamide dehydr 100.0 9.5E-65 3.2E-69 581.2 47.7 450 390-865 5-457 (458)
23 1zk7_A HGII, reductase, mercur 100.0 3E-64 1E-68 579.4 52.0 451 387-860 1-456 (467)
24 3o0h_A Glutathione reductase; 100.0 3.9E-65 1.3E-69 588.9 44.7 444 389-856 25-470 (484)
25 3dgz_A Thioredoxin reductase 2 100.0 1.2E-64 4.3E-69 585.3 47.7 455 390-856 6-475 (488)
26 3qfa_A Thioredoxin reductase 1 100.0 1.3E-64 4.3E-69 588.3 47.7 459 387-856 29-503 (519)
27 2hqm_A GR, grase, glutathione 100.0 1.9E-64 6.3E-69 582.2 46.2 446 389-857 10-472 (479)
28 2r9z_A Glutathione amide reduc 100.0 4.1E-64 1.4E-68 576.5 44.2 445 387-856 1-448 (463)
29 3dgh_A TRXR-1, thioredoxin red 100.0 7.5E-64 2.6E-68 578.4 46.6 455 389-856 8-475 (483)
30 1onf_A GR, grase, glutathione 100.0 4.2E-63 1.4E-67 573.7 45.9 441 390-856 2-496 (500)
31 1mo9_A ORF3; nucleotide bindin 100.0 1.1E-62 3.9E-67 572.8 40.2 446 387-861 40-519 (523)
32 2x8g_A Thioredoxin glutathione 100.0 4.7E-59 1.6E-63 552.4 46.1 457 389-857 106-583 (598)
33 4eqs_A Coenzyme A disulfide re 100.0 1.4E-56 4.9E-61 509.3 34.7 406 392-859 2-436 (437)
34 3oc4_A Oxidoreductase, pyridin 100.0 3.6E-55 1.2E-59 501.5 39.9 412 391-863 3-442 (452)
35 3iwa_A FAD-dependent pyridine 100.0 1.2E-53 4.1E-58 491.9 40.5 422 390-862 3-460 (472)
36 3kd9_A Coenzyme A disulfide re 100.0 1.2E-53 4.1E-58 488.7 38.5 410 390-860 3-441 (449)
37 2cdu_A NADPH oxidase; flavoenz 100.0 1.7E-52 5.7E-57 479.6 40.3 416 391-862 1-446 (452)
38 3mae_A 2-oxoisovalerate dehydr 100.0 3.4E-54 1.1E-58 442.7 22.2 217 168-384 16-232 (256)
39 1scz_A E2, dihydrolipoamide su 100.0 2.1E-53 7.2E-58 433.6 22.5 215 170-384 4-218 (233)
40 2bc0_A NADH oxidase; flavoprot 100.0 3.8E-52 1.3E-56 480.9 35.0 409 390-858 35-484 (490)
41 3cgb_A Pyridine nucleotide-dis 100.0 1.2E-51 4.3E-56 475.3 39.0 408 391-856 37-473 (480)
42 1nhp_A NADH peroxidase; oxidor 100.0 1.3E-51 4.5E-56 471.5 36.6 411 391-860 1-443 (447)
43 3l60_A Branched-chain alpha-ke 100.0 8E-53 2.7E-57 430.9 23.4 208 171-384 16-227 (250)
44 3ntd_A FAD-dependent pyridine 100.0 2E-51 7E-56 484.7 36.6 404 391-851 2-453 (565)
45 3ics_A Coenzyme A-disulfide re 100.0 1.9E-51 6.5E-56 486.4 35.6 403 390-851 36-469 (588)
46 1dpb_A Dihydrolipoyl-transacet 100.0 1.1E-51 3.8E-56 423.7 24.0 214 170-384 15-230 (243)
47 2ii3_A Lipoamide acyltransfera 100.0 2.7E-51 9.3E-56 423.8 23.0 215 168-384 29-246 (262)
48 3b8k_A PDCE2;, dihydrolipoylly 100.0 6.1E-51 2.1E-55 418.2 15.2 213 170-384 12-226 (239)
49 3rqc_A Probable lipoamide acyl 100.0 2.6E-50 8.8E-55 408.3 18.8 203 169-384 5-209 (224)
50 2v3a_A Rubredoxin reductase; a 100.0 7.1E-44 2.4E-48 399.3 28.8 362 387-826 1-377 (384)
51 3klj_A NAD(FAD)-dependent dehy 100.0 2.2E-43 7.7E-48 393.5 22.0 363 389-854 8-384 (385)
52 1xhc_A NADH oxidase /nitrite r 100.0 1.3E-42 4.5E-47 385.5 17.6 333 391-819 9-354 (367)
53 1q1r_A Putidaredoxin reductase 100.0 9.8E-41 3.4E-45 378.8 30.1 380 390-849 4-412 (431)
54 2gqw_A Ferredoxin reductase; f 100.0 8.4E-40 2.9E-44 368.7 31.0 364 390-841 7-395 (408)
55 3lxd_A FAD-dependent pyridine 100.0 3E-38 1E-42 357.4 37.3 371 389-841 8-406 (415)
56 3ef6_A Toluene 1,2-dioxygenase 100.0 4.8E-39 1.6E-43 362.9 28.7 368 391-841 3-394 (410)
57 3fg2_P Putative rubredoxin red 100.0 1.4E-37 4.6E-42 350.6 34.8 368 391-840 2-394 (404)
58 2xt6_A 2-oxoglutarate decarbox 100.0 9.4E-40 3.2E-44 398.5 15.0 199 185-384 1-214 (1113)
59 4gcm_A TRXR, thioredoxin reduc 100.0 4E-37 1.4E-41 334.7 28.4 292 390-737 6-303 (312)
60 4a5l_A Thioredoxin reductase; 100.0 2.2E-36 7.5E-41 329.0 28.6 301 387-736 1-308 (314)
61 1q23_A Chloramphenicol acetylt 100.0 4.6E-36 1.6E-40 302.8 19.9 181 179-384 18-207 (219)
62 1m6i_A Programmed cell death p 100.0 7E-36 2.4E-40 344.5 22.7 328 387-751 8-363 (493)
63 2q7v_A Thioredoxin reductase; 100.0 3.5E-34 1.2E-38 313.2 31.6 299 387-737 5-309 (325)
64 2q0l_A TRXR, thioredoxin reduc 100.0 4.7E-34 1.6E-38 310.2 31.1 293 391-737 2-306 (311)
65 3cty_A Thioredoxin reductase; 100.0 7.8E-34 2.7E-38 309.7 31.5 295 387-737 13-313 (319)
66 3cla_A Type III chloramphenico 100.0 7.2E-35 2.5E-39 293.1 20.5 175 191-384 23-203 (213)
67 3f8d_A Thioredoxin reductase ( 100.0 5.1E-34 1.8E-38 311.2 28.7 293 390-737 15-314 (323)
68 3r9u_A Thioredoxin reductase; 100.0 1E-33 3.5E-38 307.8 30.6 296 390-737 4-309 (315)
69 2zbw_A Thioredoxin reductase; 100.0 5.2E-34 1.8E-38 313.3 26.9 301 388-738 3-315 (335)
70 1fl2_A Alkyl hydroperoxide red 100.0 1.5E-33 5.2E-38 306.0 30.0 294 390-737 1-302 (310)
71 1trb_A Thioredoxin reductase; 100.0 1.4E-33 4.6E-38 307.8 28.1 295 390-737 5-311 (320)
72 4fk1_A Putative thioredoxin re 100.0 3.7E-34 1.3E-38 309.9 23.2 287 386-736 3-296 (304)
73 3fbs_A Oxidoreductase; structu 100.0 1.8E-33 6.3E-38 303.1 24.4 280 391-737 3-289 (297)
74 2i9d_A Chloramphenicol acetylt 100.0 1.1E-33 3.6E-38 284.4 19.9 175 191-384 25-211 (217)
75 3ab1_A Ferredoxin--NADP reduct 100.0 4.5E-33 1.5E-37 309.1 26.2 303 387-738 11-326 (360)
76 3itj_A Thioredoxin reductase 1 100.0 1.1E-32 3.6E-37 302.9 28.8 299 389-737 21-332 (338)
77 3lzw_A Ferredoxin--NADP reduct 100.0 1.1E-32 3.6E-37 302.1 26.6 294 390-737 7-312 (332)
78 4g6h_A Rotenone-insensitive NA 100.0 4.6E-33 1.6E-37 320.4 24.2 299 390-737 42-398 (502)
79 2a87_A TRXR, TR, thioredoxin r 100.0 1.1E-32 3.6E-37 302.9 25.7 295 387-737 11-313 (335)
80 1vdc_A NTR, NADPH dependent th 100.0 4E-32 1.4E-36 298.0 29.9 297 390-737 8-320 (333)
81 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.4E-31 4.7E-36 310.5 29.7 295 389-737 211-513 (521)
82 3d1c_A Flavin-containing putat 100.0 1.6E-31 5.4E-36 297.6 18.9 316 390-739 4-338 (369)
83 2vdc_G Glutamate synthase [NAD 100.0 1.5E-31 5.3E-36 303.7 18.0 285 390-737 122-441 (456)
84 4a9w_A Monooxygenase; baeyer-v 100.0 5.2E-31 1.8E-35 291.6 21.7 304 390-738 3-350 (357)
85 1gte_A Dihydropyrimidine dehyd 100.0 7.7E-32 2.6E-36 335.2 16.3 315 390-765 187-536 (1025)
86 3sx6_A Sulfide-quinone reducta 100.0 8.3E-30 2.8E-34 289.9 20.4 295 387-737 1-341 (437)
87 2xve_A Flavin-containing monoo 100.0 3.8E-28 1.3E-32 277.7 27.7 302 391-739 3-340 (464)
88 3hyw_A Sulfide-quinone reducta 100.0 1.5E-29 5.1E-34 287.0 15.0 287 391-737 3-330 (430)
89 1lqt_A FPRA; NADP+ derivative, 100.0 1.2E-29 4E-34 288.7 14.0 287 390-738 3-385 (456)
90 1cjc_A Protein (adrenodoxin re 100.0 3.2E-29 1.1E-33 285.5 17.1 287 390-738 6-393 (460)
91 3h8l_A NADH oxidase; membrane 100.0 7.6E-28 2.6E-32 271.7 22.9 284 391-738 2-334 (409)
92 2gag_A Heterotetrameric sarcos 100.0 5.1E-28 1.8E-32 298.8 23.1 284 389-737 127-441 (965)
93 3h28_A Sulfide-quinone reducta 100.0 2.2E-28 7.4E-33 277.8 17.4 284 391-737 3-330 (430)
94 3vrd_B FCCB subunit, flavocyto 100.0 9.5E-29 3.3E-33 278.4 14.2 284 391-736 3-320 (401)
95 3s5w_A L-ornithine 5-monooxyge 100.0 1.8E-27 6E-32 273.3 24.9 321 390-736 30-445 (463)
96 1o94_A Tmadh, trimethylamine d 100.0 2.7E-28 9.3E-33 293.5 15.5 289 389-749 388-706 (729)
97 2gv8_A Monooxygenase; FMO, FAD 100.0 1.6E-27 5.6E-32 272.0 20.9 304 389-739 5-361 (447)
98 3k30_A Histamine dehydrogenase 100.0 5.7E-28 1.9E-32 289.7 17.4 272 388-738 389-673 (690)
99 1zy8_K Pyruvate dehydrogenase 99.9 1.6E-28 5.6E-33 247.3 3.1 139 3-142 3-169 (229)
100 1y56_A Hypothetical protein PH 99.9 1.9E-26 6.6E-31 265.6 17.9 257 389-738 107-375 (493)
101 1ps9_A 2,4-dienoyl-COA reducta 99.9 7E-26 2.4E-30 270.9 21.8 259 389-735 372-671 (671)
102 3gwf_A Cyclohexanone monooxyge 99.9 3.4E-25 1.2E-29 257.0 18.8 307 390-736 8-453 (540)
103 3uox_A Otemo; baeyer-villiger 99.9 6E-24 2.1E-28 246.8 21.9 198 390-605 9-220 (545)
104 4ap3_A Steroid monooxygenase; 99.9 6.1E-23 2.1E-27 238.5 22.0 193 389-605 20-226 (549)
105 1w4x_A Phenylacetone monooxyge 99.9 8.5E-23 2.9E-27 238.2 17.6 311 390-737 16-463 (542)
106 2ywl_A Thioredoxin reductase r 99.8 9.1E-21 3.1E-25 187.9 15.3 152 572-738 3-169 (180)
107 2e5v_A L-aspartate oxidase; ar 99.8 2.9E-20 1E-24 212.6 0.7 314 392-736 1-365 (472)
108 4b63_A L-ornithine N5 monooxyg 99.8 4.2E-17 1.5E-21 187.8 25.3 246 492-738 151-485 (501)
109 1k8m_A E2 component of branche 99.7 1.2E-17 4.3E-22 144.3 11.1 81 1-81 1-82 (93)
110 3crk_C Dihydrolipoyllysine-res 99.7 2.4E-17 8.4E-22 141.1 11.9 79 3-81 5-84 (87)
111 2dnc_A Pyruvate dehydrogenase 99.7 1.5E-17 5.2E-22 145.0 10.8 81 2-82 6-87 (98)
112 1y8o_B Dihydrolipoyllysine-res 99.7 2.3E-17 8E-22 149.7 12.3 80 3-82 27-107 (128)
113 2dne_A Dihydrolipoyllysine-res 99.7 1.6E-17 5.4E-22 147.4 9.3 79 3-81 7-86 (108)
114 2gqf_A Hypothetical protein HI 99.7 1.8E-17 6.1E-22 185.2 6.5 211 389-611 3-267 (401)
115 1ghj_A E2, E2, the dihydrolipo 99.7 2.2E-16 7.4E-21 132.8 9.7 76 4-79 2-77 (79)
116 2l5t_A Lipoamide acyltransfera 99.6 7.3E-16 2.5E-20 128.9 8.9 75 4-78 2-76 (77)
117 1pmr_A Dihydrolipoyl succinylt 99.6 2.8E-17 9.5E-22 138.5 -0.6 78 1-79 1-78 (80)
118 1qjo_A Dihydrolipoamide acetyl 99.6 1.4E-15 4.8E-20 128.2 9.1 78 1-81 1-78 (80)
119 3fpz_A Thiazole biosynthetic e 99.6 1.6E-17 5.4E-22 181.1 -5.2 243 390-737 65-322 (326)
120 1iyu_A E2P, dihydrolipoamide a 99.6 1.4E-14 4.8E-19 121.6 10.6 75 4-81 2-76 (79)
121 1gjx_A Pyruvate dehydrogenase; 99.5 3.9E-15 1.3E-19 125.8 5.1 78 2-80 1-78 (81)
122 2cul_A Glucose-inhibited divis 99.5 1.7E-13 5.9E-18 141.2 12.2 157 571-737 4-229 (232)
123 3ces_A MNMG, tRNA uridine 5-ca 99.5 1.5E-12 5.1E-17 150.6 20.3 173 389-600 27-220 (651)
124 3k7m_X 6-hydroxy-L-nicotine ox 99.4 1.5E-14 5.1E-19 163.9 0.1 122 582-716 177-307 (431)
125 2k7v_A Dihydrolipoyllysine-res 99.4 4.3E-14 1.5E-18 120.3 0.2 74 1-81 1-74 (85)
126 2zxi_A TRNA uridine 5-carboxym 99.3 2.3E-11 8E-16 140.1 20.1 173 389-600 26-219 (637)
127 1z6h_A Biotin/lipoyl attachmen 99.3 2E-11 6.7E-16 100.4 9.7 64 16-79 6-69 (72)
128 3cp8_A TRNA uridine 5-carboxym 99.3 1.1E-10 3.6E-15 135.2 19.0 172 390-600 21-214 (641)
129 2jku_A Propionyl-COA carboxyla 99.2 1.9E-12 6.4E-17 112.1 2.8 76 3-78 15-94 (94)
130 2kcc_A Acetyl-COA carboxylase 99.2 6.9E-12 2.4E-16 106.1 6.1 65 16-81 12-76 (84)
131 2dn8_A Acetyl-COA carboxylase 99.2 5.1E-11 1.7E-15 104.5 9.4 65 16-81 24-88 (100)
132 1chu_A Protein (L-aspartate ox 99.2 1.3E-10 4.5E-15 134.6 14.1 33 390-423 8-40 (540)
133 3nlc_A Uncharacterized protein 99.1 1.3E-10 4.4E-15 133.7 12.9 43 695-737 497-540 (549)
134 2d5d_A Methylmalonyl-COA decar 99.1 1.7E-10 5.7E-15 95.4 9.8 63 16-78 12-74 (74)
135 1kf6_A Fumarate reductase flav 99.1 3.4E-10 1.2E-14 132.7 15.8 34 390-423 5-40 (602)
136 1dcz_A Transcarboxylase 1.3S s 99.1 1.7E-10 5.8E-15 96.1 8.7 63 16-78 15-77 (77)
137 2ejm_A Methylcrotonoyl-COA car 99.1 1.8E-10 6.3E-15 100.7 8.7 67 16-82 21-87 (99)
138 1bdo_A Acetyl-COA carboxylase; 99.1 1.8E-10 6.1E-15 96.7 8.0 62 17-78 12-80 (80)
139 1rp0_A ARA6, thiazole biosynth 99.0 8E-10 2.7E-14 117.3 12.3 166 571-737 40-272 (284)
140 3gyx_A Adenylylsulfate reducta 99.0 1.4E-09 4.8E-14 128.2 13.6 34 390-423 22-61 (662)
141 3n6r_A Propionyl-COA carboxyla 98.9 1.3E-09 4.5E-14 128.7 9.5 62 17-78 620-681 (681)
142 3v76_A Flavoprotein; structura 98.9 1.5E-09 5.1E-14 121.4 9.2 149 387-545 24-188 (417)
143 3rnm_E Lipoamide acyltransfera 98.9 3.2E-10 1.1E-14 86.5 2.5 42 100-142 7-48 (58)
144 2eq9_C Pyruvate dehydrogenase 98.9 5.6E-10 1.9E-14 79.9 3.2 38 102-140 2-39 (41)
145 2bs2_A Quinol-fumarate reducta 98.9 4.7E-09 1.6E-13 123.8 12.3 35 389-423 4-38 (660)
146 2eq8_C Pyruvate dehydrogenase 98.9 6.3E-10 2.2E-14 79.1 2.4 37 103-140 2-38 (40)
147 2eq7_C 2-oxoglutarate dehydrog 98.9 6E-10 2E-14 79.3 2.3 37 103-140 2-38 (40)
148 3va7_A KLLA0E08119P; carboxyla 98.9 3.1E-09 1.1E-13 132.1 9.6 61 17-77 1175-1235(1236)
149 3hbl_A Pyruvate carboxylase; T 98.8 4.9E-09 1.7E-13 130.0 9.2 64 17-80 1085-1148(1150)
150 3u9t_A MCC alpha, methylcroton 98.8 5E-10 1.7E-14 132.1 0.0 64 17-80 610-673 (675)
151 1bal_A Dihydrolipoamide succin 98.8 1.6E-09 5.5E-14 81.1 2.5 41 100-141 9-49 (51)
152 1w85_I Dihydrolipoyllysine-res 98.8 2.3E-09 8E-14 79.7 2.4 40 101-141 7-46 (49)
153 3dme_A Conserved exported prot 98.8 2.7E-08 9.4E-13 109.4 11.9 36 387-422 1-36 (369)
154 1rp0_A ARA6, thiazole biosynth 98.7 3.9E-08 1.3E-12 104.2 12.0 134 390-545 39-192 (284)
155 2ywl_A Thioredoxin reductase r 98.7 5.9E-08 2E-12 95.1 12.2 110 391-545 2-111 (180)
156 2cul_A Glucose-inhibited divis 98.7 4.2E-08 1.4E-12 100.6 10.6 123 390-545 3-126 (232)
157 1w4i_A Pyruvate dehydrogenase 98.7 8.1E-09 2.8E-13 80.5 3.1 41 101-142 5-45 (62)
158 1y0p_A Fumarate reductase flav 98.6 1.7E-07 5.9E-12 109.6 14.8 33 390-422 126-158 (571)
159 2f60_K Pyruvate dehydrogenase 98.6 8.8E-09 3E-13 80.6 2.5 41 101-142 10-50 (64)
160 2coo_A Lipoamide acyltransfera 98.6 1.4E-08 4.6E-13 81.1 3.5 42 100-142 15-56 (70)
161 3nix_A Flavoprotein/dehydrogen 98.6 9.1E-08 3.1E-12 107.5 10.9 137 390-544 5-166 (421)
162 2i0z_A NAD(FAD)-utilizing dehy 98.6 1.7E-07 5.8E-12 106.1 12.4 150 390-544 26-191 (447)
163 1qo8_A Flavocytochrome C3 fuma 98.6 2.7E-07 9.2E-12 107.8 14.0 35 389-423 120-154 (566)
164 1zko_A Glycine cleavage system 98.6 6.3E-08 2.2E-12 88.4 6.4 71 6-81 39-116 (136)
165 2k32_A A; NMR {Campylobacter j 98.6 6.3E-08 2.2E-12 87.4 6.0 66 16-81 8-103 (116)
166 3bg3_A Pyruvate carboxylase, m 98.5 2E-08 6.8E-13 117.4 3.1 62 17-78 657-718 (718)
167 3oz2_A Digeranylgeranylglycero 98.5 7.9E-08 2.7E-12 106.7 7.9 36 387-423 2-37 (397)
168 1y56_B Sarcosine oxidase; dehy 98.5 2.5E-07 8.4E-12 102.4 11.7 36 387-422 2-37 (382)
169 4at0_A 3-ketosteroid-delta4-5a 98.5 6E-07 2E-11 103.4 15.0 34 389-422 40-73 (510)
170 2bry_A NEDD9 interacting prote 98.5 1.9E-08 6.4E-13 115.5 2.1 144 532-679 37-234 (497)
171 3alj_A 2-methyl-3-hydroxypyrid 98.5 2.7E-07 9.2E-12 102.1 11.3 33 390-422 11-43 (379)
172 2oln_A NIKD protein; flavoprot 98.5 5.5E-07 1.9E-11 100.3 13.6 37 387-423 1-37 (397)
173 2bry_A NEDD9 interacting prote 98.5 2.5E-07 8.7E-12 106.0 10.8 128 389-546 91-232 (497)
174 1ryi_A Glycine oxidase; flavop 98.5 3.3E-07 1.1E-11 101.4 10.5 35 388-422 15-49 (382)
175 3dje_A Fructosyl amine: oxygen 98.5 4.3E-07 1.5E-11 102.5 11.4 37 387-423 3-40 (438)
176 3jsk_A Cypbp37 protein; octame 98.5 4.1E-07 1.4E-11 97.5 10.5 51 389-445 78-130 (344)
177 3cgv_A Geranylgeranyl reductas 98.5 3.5E-07 1.2E-11 101.7 10.2 33 390-422 4-36 (397)
178 3ps9_A TRNA 5-methylaminomethy 98.5 4.7E-07 1.6E-11 108.1 11.8 34 389-422 271-304 (676)
179 1yvv_A Amine oxidase, flavin-c 98.5 5.3E-07 1.8E-11 97.8 11.2 40 391-436 3-42 (336)
180 2qf7_A Pyruvate carboxylase pr 98.4 9.3E-08 3.2E-12 119.0 5.6 62 17-78 1103-1164(1165)
181 2gf3_A MSOX, monomeric sarcosi 98.4 2.1E-06 7.1E-11 95.1 16.1 72 594-676 135-206 (389)
182 3e1t_A Halogenase; flavoprotei 98.4 9.1E-07 3.1E-11 102.0 13.0 34 390-423 7-40 (512)
183 2gag_B Heterotetrameric sarcos 98.4 7.5E-07 2.6E-11 99.3 11.1 33 390-422 21-55 (405)
184 3pl8_A Pyranose 2-oxidase; sub 98.4 1.6E-08 5.5E-13 118.8 -3.1 63 622-688 271-337 (623)
185 2uzz_A N-methyl-L-tryptophan o 98.4 1.3E-06 4.5E-11 96.1 12.5 34 390-423 2-35 (372)
186 1d4d_A Flavocytochrome C fumar 98.4 1.7E-06 5.7E-11 101.0 13.7 33 390-422 126-158 (572)
187 3atr_A Conserved archaeal prot 98.4 3.5E-07 1.2E-11 103.7 7.8 37 387-423 3-39 (453)
188 3fmw_A Oxygenase; mithramycin, 98.4 1.4E-06 4.9E-11 101.3 13.0 35 390-424 49-83 (570)
189 2x3n_A Probable FAD-dependent 98.4 8.1E-07 2.8E-11 98.9 10.3 34 390-423 6-39 (399)
190 2gmh_A Electron transfer flavo 98.4 1.3E-06 4.4E-11 102.2 12.2 33 390-422 35-73 (584)
191 3pvc_A TRNA 5-methylaminomethy 98.4 1.2E-06 4E-11 104.8 12.2 33 390-422 264-296 (689)
192 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 7.6E-07 2.6E-11 96.9 9.6 39 391-435 2-43 (342)
193 3kkj_A Amine oxidase, flavin-c 98.4 2.4E-07 8.4E-12 96.7 5.2 40 391-436 3-42 (336)
194 3i3l_A Alkylhalidase CMLS; fla 98.3 1.4E-06 4.9E-11 101.5 12.0 33 390-422 23-55 (591)
195 3nrn_A Uncharacterized protein 98.3 2.9E-06 9.9E-11 95.2 13.9 41 391-437 1-41 (421)
196 3rp8_A Flavoprotein monooxygen 98.3 5.1E-07 1.8E-11 100.9 7.6 35 389-423 22-56 (407)
197 3nyc_A D-arginine dehydrogenas 98.3 1.7E-06 6E-11 95.3 11.8 33 389-422 8-40 (381)
198 1k0i_A P-hydroxybenzoate hydro 98.3 1E-06 3.5E-11 97.9 9.3 34 390-423 2-35 (394)
199 3c4n_A Uncharacterized protein 98.3 1.1E-06 3.6E-11 98.3 9.1 33 390-422 36-70 (405)
200 2h88_A Succinate dehydrogenase 98.3 4.3E-06 1.5E-10 97.8 14.3 35 389-423 17-51 (621)
201 2xdo_A TETX2 protein; tetracyc 98.3 1.7E-06 5.8E-11 96.3 10.5 36 389-424 25-60 (398)
202 3ka7_A Oxidoreductase; structu 98.3 2.8E-06 9.6E-11 95.4 12.3 41 391-437 1-41 (425)
203 3ihg_A RDME; flavoenzyme, anth 98.3 3.1E-06 1.1E-10 98.1 12.8 35 389-423 4-38 (535)
204 3c96_A Flavin-containing monoo 98.3 3.3E-06 1.1E-10 94.4 12.1 35 389-423 3-38 (410)
205 2qa1_A PGAE, polyketide oxygen 98.3 3.1E-06 1.1E-10 97.0 12.0 37 387-423 8-44 (500)
206 2wdq_A Succinate dehydrogenase 98.2 2.3E-06 7.9E-11 99.9 10.7 34 390-423 7-40 (588)
207 4a9w_A Monooxygenase; baeyer-v 98.2 8.2E-06 2.8E-10 88.8 14.4 95 571-674 4-131 (357)
208 3f8d_A Thioredoxin reductase ( 98.2 6.6E-06 2.3E-10 88.3 13.0 100 571-679 16-129 (323)
209 2vou_A 2,6-dihydroxypyridine h 98.2 1.8E-06 6.1E-11 96.1 8.5 34 390-423 5-38 (397)
210 2qa2_A CABE, polyketide oxygen 98.2 5.2E-06 1.8E-10 95.1 12.2 34 390-423 12-45 (499)
211 2gjc_A Thiazole biosynthetic e 98.2 4.8E-06 1.7E-10 88.7 10.6 41 389-435 64-106 (326)
212 2aqj_A Tryptophan halogenase, 98.2 4.5E-06 1.5E-10 96.8 11.2 34 389-422 4-40 (538)
213 3da1_A Glycerol-3-phosphate de 98.2 5.3E-06 1.8E-10 96.4 11.4 34 389-422 17-50 (561)
214 3axb_A Putative oxidoreductase 98.2 1.1E-05 3.7E-10 91.3 13.7 33 390-422 23-56 (448)
215 3lzw_A Ferredoxin--NADP reduct 98.2 7E-06 2.4E-10 88.5 11.5 100 571-679 8-130 (332)
216 1pj5_A N,N-dimethylglycine oxi 98.1 8.1E-06 2.8E-10 99.7 12.7 35 388-422 2-37 (830)
217 3itj_A Thioredoxin reductase 1 98.1 8.7E-06 3E-10 88.0 11.6 103 570-679 22-146 (338)
218 1hpc_A H protein of the glycin 98.1 1.4E-06 4.9E-11 79.1 4.2 69 6-80 30-106 (131)
219 2zbw_A Thioredoxin reductase; 98.1 1.8E-05 6E-10 85.6 13.5 96 571-674 6-120 (335)
220 3a7l_A H-protein, glycine clea 98.1 3.3E-06 1.1E-10 76.4 6.1 70 6-80 31-107 (128)
221 3nlc_A Uncharacterized protein 98.1 5.4E-06 1.8E-10 95.3 9.5 113 570-690 107-292 (549)
222 3fbs_A Oxidoreductase; structu 98.1 1.8E-05 6.1E-10 83.8 12.7 100 571-679 3-116 (297)
223 3v76_A Flavoprotein; structura 98.1 1.3E-05 4.6E-10 89.3 12.1 98 570-676 27-188 (417)
224 4hb9_A Similarities with proba 98.1 4.1E-06 1.4E-10 93.3 7.8 33 391-423 2-34 (412)
225 2q0l_A TRXR, thioredoxin reduc 98.1 2.8E-05 9.7E-10 83.0 13.7 99 572-679 3-118 (311)
226 2qcu_A Aerobic glycerol-3-phos 98.1 1.6E-05 5.3E-10 91.3 12.4 33 390-422 3-35 (501)
227 3ab1_A Ferredoxin--NADP reduct 98.0 2.4E-05 8.2E-10 85.6 12.8 98 570-675 14-131 (360)
228 1onl_A Glycine cleavage system 98.0 5.1E-06 1.7E-10 75.2 6.0 70 6-80 30-106 (128)
229 2xve_A Flavin-containing monoo 98.0 4.2E-05 1.4E-09 86.7 14.5 105 571-679 3-172 (464)
230 4gut_A Lysine-specific histone 98.0 2E-05 6.7E-10 94.5 11.7 33 390-422 336-368 (776)
231 2e4g_A Tryptophan halogenase; 98.0 2.3E-05 7.7E-10 91.1 11.8 35 389-423 24-61 (550)
232 1fl2_A Alkyl hydroperoxide red 98.0 3.7E-05 1.3E-09 82.0 12.2 99 572-678 3-118 (310)
233 2pyx_A Tryptophan halogenase; 98.0 3.4E-05 1.2E-09 89.1 12.6 35 389-423 6-52 (526)
234 2r0c_A REBC; flavin adenine di 98.0 4.2E-05 1.4E-09 88.7 13.4 34 390-423 26-59 (549)
235 1jnr_A Adenylylsulfate reducta 97.9 2.2E-05 7.4E-10 92.8 10.9 34 390-423 22-59 (643)
236 2q7v_A Thioredoxin reductase; 97.9 6.1E-05 2.1E-09 81.0 13.5 100 571-679 9-127 (325)
237 3d1c_A Flavin-containing putat 97.9 5.9E-05 2E-09 82.6 13.6 98 571-677 5-145 (369)
238 2weu_A Tryptophan 5-halogenase 97.9 2.7E-05 9.2E-10 89.7 11.2 32 391-422 3-37 (511)
239 2gv8_A Monooxygenase; FMO, FAD 97.9 4.2E-05 1.4E-09 86.4 12.3 106 570-678 6-182 (447)
240 4b1b_A TRXR, thioredoxin reduc 97.9 1.8E-05 6.1E-10 91.0 9.2 98 391-546 224-321 (542)
241 2yqu_A 2-oxoglutarate dehydrog 97.9 3.4E-05 1.2E-09 87.3 11.4 98 391-546 168-266 (455)
242 3r9u_A Thioredoxin reductase; 97.9 4.6E-05 1.6E-09 81.3 11.7 99 570-679 4-122 (315)
243 3alj_A 2-methyl-3-hydroxypyrid 97.9 5.7E-05 2E-09 83.2 12.8 97 570-677 11-162 (379)
244 4ap3_A Steroid monooxygenase; 97.9 4.5E-05 1.6E-09 88.2 12.2 101 571-679 22-165 (549)
245 2eq6_A Pyruvate dehydrogenase 97.9 3.2E-05 1.1E-09 87.8 10.7 98 391-546 170-273 (464)
246 3nix_A Flavoprotein/dehydrogen 97.9 9.6E-05 3.3E-09 82.6 14.5 101 571-675 6-166 (421)
247 3h8l_A NADH oxidase; membrane 97.9 1.1E-05 3.7E-10 90.1 6.5 102 571-679 2-117 (409)
248 2rgh_A Alpha-glycerophosphate 97.9 5.9E-05 2E-09 87.8 13.0 34 389-422 31-64 (571)
249 2gqf_A Hypothetical protein HI 97.9 5.7E-05 1.9E-09 83.8 12.3 98 571-677 5-170 (401)
250 1vdc_A NTR, NADPH dependent th 97.9 4.1E-05 1.4E-09 82.6 11.0 99 571-679 9-128 (333)
251 3sx6_A Sulfide-quinone reducta 97.9 1.6E-05 5.3E-10 89.6 7.8 98 571-679 5-116 (437)
252 3klj_A NAD(FAD)-dependent dehy 97.9 2.6E-05 8.8E-10 86.1 9.3 100 570-679 9-120 (385)
253 1trb_A Thioredoxin reductase; 97.9 7.8E-05 2.7E-09 79.8 12.9 99 571-679 6-120 (320)
254 3cty_A Thioredoxin reductase; 97.9 9.3E-05 3.2E-09 79.3 13.4 100 570-679 16-130 (319)
255 3gwf_A Cyclohexanone monooxyge 97.9 8.3E-05 2.8E-09 85.8 13.5 100 571-678 9-152 (540)
256 2dkh_A 3-hydroxybenzoate hydro 97.8 6E-05 2.1E-09 89.0 12.1 35 389-423 31-66 (639)
257 4gde_A UDP-galactopyranose mut 97.8 7.6E-06 2.6E-10 94.2 4.0 41 390-436 10-51 (513)
258 3oc4_A Oxidoreductase, pyridin 97.8 2.9E-05 9.8E-10 87.9 8.6 102 571-679 3-119 (452)
259 2x3n_A Probable FAD-dependent 97.8 6.4E-05 2.2E-09 83.5 11.2 98 571-676 7-167 (399)
260 1yvv_A Amine oxidase, flavin-c 97.8 0.00014 4.9E-09 78.3 13.5 99 571-677 3-164 (336)
261 1v0j_A UDP-galactopyranose mut 97.8 1.3E-05 4.6E-10 89.0 4.9 46 387-438 4-50 (399)
262 1lvl_A Dihydrolipoamide dehydr 97.8 2.9E-05 9.8E-10 88.0 7.6 96 391-546 172-270 (458)
263 2bcg_G Secretory pathway GDP d 97.8 1.4E-05 4.8E-10 90.4 5.0 45 387-437 8-52 (453)
264 3uox_A Otemo; baeyer-villiger 97.8 7.4E-05 2.5E-09 86.3 11.1 101 571-679 10-153 (545)
265 2v3a_A Rubredoxin reductase; a 97.7 8.1E-05 2.8E-09 82.2 10.6 100 390-546 145-245 (384)
266 4dgk_A Phytoene dehydrogenase; 97.7 1.1E-05 3.7E-10 92.7 3.5 58 610-675 220-278 (501)
267 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00014 4.6E-09 83.8 12.6 101 570-678 212-329 (521)
268 2a87_A TRXR, TR, thioredoxin r 97.7 0.00014 4.7E-09 78.6 11.9 100 570-679 14-130 (335)
269 2vou_A 2,6-dihydroxypyridine h 97.7 9.5E-05 3.2E-09 82.0 10.9 99 570-676 5-154 (397)
270 3s5w_A L-ornithine 5-monooxyge 97.7 0.00014 4.9E-09 82.3 12.6 104 572-679 32-196 (463)
271 1s3e_A Amine oxidase [flavin-c 97.7 1.7E-05 5.7E-10 91.6 4.7 45 387-437 1-45 (520)
272 2i0z_A NAD(FAD)-utilizing dehy 97.7 0.0002 6.8E-09 80.8 13.0 97 571-675 27-191 (447)
273 1xhc_A NADH oxidase /nitrite r 97.7 4.9E-05 1.7E-09 83.3 7.7 99 569-679 7-117 (367)
274 1q1r_A Putidaredoxin reductase 97.7 8.7E-05 3E-09 83.3 9.5 100 570-679 4-118 (431)
275 3ef6_A Toluene 1,2-dioxygenase 97.7 0.00013 4.4E-09 81.3 10.8 99 571-679 3-115 (410)
276 4fk1_A Putative thioredoxin re 97.7 0.00027 9.3E-09 75.1 12.9 100 572-679 8-121 (304)
277 3h28_A Sulfide-quinone reducta 97.7 2.3E-05 7.9E-10 88.1 4.5 98 571-679 3-113 (430)
278 1ebd_A E3BD, dihydrolipoamide 97.6 0.00012 4E-09 83.0 10.0 99 390-546 170-272 (455)
279 3atr_A Conserved archaeal prot 97.6 0.0003 1E-08 79.5 13.4 103 571-677 7-164 (453)
280 3kd9_A Coenzyme A disulfide re 97.6 9.5E-05 3.2E-09 83.5 9.2 101 570-679 3-118 (449)
281 2b9w_A Putative aminooxidase; 97.6 3.1E-05 1E-09 86.8 5.1 42 389-436 5-47 (424)
282 3oz2_A Digeranylgeranylglycero 97.6 0.0004 1.4E-08 76.5 14.1 100 572-675 6-162 (397)
283 3hdq_A UDP-galactopyranose mut 97.6 3E-05 1E-09 85.4 4.8 43 388-436 27-69 (397)
284 4a5l_A Thioredoxin reductase; 97.6 0.00032 1.1E-08 74.8 12.8 100 571-679 5-125 (314)
285 1y0p_A Fumarate reductase flav 97.6 0.00039 1.3E-08 81.0 14.5 102 571-676 127-318 (571)
286 4eqs_A Coenzyme A disulfide re 97.6 0.0001 3.5E-09 82.9 8.8 103 572-679 2-120 (437)
287 3ics_A Coenzyme A-disulfide re 97.6 0.00011 3.7E-09 86.1 9.4 105 570-679 36-156 (588)
288 3ntd_A FAD-dependent pyridine 97.6 9.5E-05 3.3E-09 86.2 8.8 104 571-679 2-121 (565)
289 2r9z_A Glutathione amide reduc 97.6 0.00011 3.8E-09 83.2 9.0 98 391-546 167-266 (463)
290 3cgv_A Geranylgeranyl reductas 97.6 0.00048 1.6E-08 76.0 13.9 100 571-675 5-162 (397)
291 3iwa_A FAD-dependent pyridine 97.6 0.00013 4.6E-09 82.8 9.6 105 570-679 3-129 (472)
292 3e1t_A Halogenase; flavoprotei 97.6 0.00064 2.2E-08 78.0 15.3 103 571-677 8-174 (512)
293 3dme_A Conserved exported prot 97.6 0.00046 1.6E-08 75.2 13.6 57 613-675 152-209 (369)
294 1v59_A Dihydrolipoamide dehydr 97.6 0.00014 4.8E-09 82.8 9.6 100 391-546 184-289 (478)
295 4gcm_A TRXR, thioredoxin reduc 97.6 0.00047 1.6E-08 73.5 13.1 99 571-679 7-120 (312)
296 2yg5_A Putrescine oxidase; oxi 97.6 4.2E-05 1.4E-09 86.5 4.9 42 390-437 5-46 (453)
297 3hyw_A Sulfide-quinone reducta 97.6 2.7E-05 9.2E-10 87.5 3.3 98 570-678 2-112 (430)
298 3g5s_A Methylenetetrahydrofola 97.6 6.2E-05 2.1E-09 81.0 5.7 54 391-444 2-55 (443)
299 1qo8_A Flavocytochrome C3 fuma 97.6 0.00048 1.6E-08 80.1 13.9 102 571-676 122-313 (566)
300 1i8t_A UDP-galactopyranose mut 97.5 4.4E-05 1.5E-09 83.8 4.7 42 391-438 2-43 (367)
301 3ihg_A RDME; flavoenzyme, anth 97.5 0.00052 1.8E-08 79.3 14.0 100 571-675 6-183 (535)
302 1k0i_A P-hydroxybenzoate hydro 97.5 0.00043 1.5E-08 76.5 12.8 102 571-677 3-165 (394)
303 1ges_A Glutathione reductase; 97.5 0.00013 4.4E-09 82.4 8.2 100 390-546 167-267 (450)
304 3klr_A Glycine cleavage system 97.5 0.00013 4.4E-09 65.1 6.4 49 18-66 32-81 (125)
305 3nks_A Protoporphyrinogen oxid 97.5 4.7E-05 1.6E-09 86.7 4.4 54 612-674 235-289 (477)
306 3fg2_P Putative rubredoxin red 97.5 0.00014 4.7E-09 81.0 8.1 98 571-679 2-114 (404)
307 1zmd_A Dihydrolipoyl dehydroge 97.5 0.00026 8.8E-09 80.5 10.4 100 391-546 179-284 (474)
308 1sez_A Protoporphyrinogen oxid 97.5 5.6E-05 1.9E-09 86.8 4.8 44 387-436 10-53 (504)
309 3fmw_A Oxygenase; mithramycin, 97.5 0.00026 9E-09 82.2 10.5 100 571-675 50-207 (570)
310 2cdu_A NADPH oxidase; flavoenz 97.5 0.00012 4E-09 82.8 7.3 103 572-679 2-121 (452)
311 3vrd_B FCCB subunit, flavocyto 97.5 7.8E-05 2.7E-09 82.8 5.7 99 570-679 2-112 (401)
312 1ryi_A Glycine oxidase; flavop 97.5 0.00041 1.4E-08 76.2 11.6 55 612-675 165-219 (382)
313 2jae_A L-amino acid oxidase; o 97.5 6.8E-05 2.3E-09 85.7 5.2 41 389-435 10-50 (489)
314 3lxd_A FAD-dependent pyridine 97.5 0.00015 5.3E-09 80.8 8.0 100 570-679 9-123 (415)
315 1nhp_A NADH peroxidase; oxidor 97.5 0.00023 7.9E-09 80.3 9.5 104 571-679 1-119 (447)
316 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 0.00045 1.5E-08 74.8 11.5 96 571-674 2-164 (342)
317 1rsg_A FMS1 protein; FAD bindi 97.5 5.1E-05 1.8E-09 87.4 4.2 41 390-436 8-49 (516)
318 1d4d_A Flavocytochrome C fumar 97.5 0.00081 2.8E-08 78.2 14.3 103 570-676 126-318 (572)
319 2e1m_A L-glutamate oxidase; L- 97.5 7.9E-05 2.7E-09 81.3 5.3 45 388-437 42-86 (376)
320 1pn0_A Phenol 2-monooxygenase; 97.5 0.00046 1.6E-08 81.7 12.3 34 390-423 8-46 (665)
321 3i6d_A Protoporphyrinogen oxid 97.5 4.4E-05 1.5E-09 86.7 3.4 42 390-437 5-52 (470)
322 1d5t_A Guanine nucleotide diss 97.5 7.4E-05 2.5E-09 83.9 5.1 58 611-676 234-291 (433)
323 3p1w_A Rabgdi protein; GDI RAB 97.5 7.4E-05 2.5E-09 84.0 5.0 47 386-438 16-62 (475)
324 2qa2_A CABE, polyketide oxygen 97.4 0.001 3.5E-08 75.9 14.6 102 570-676 12-167 (499)
325 2qa1_A PGAE, polyketide oxygen 97.4 0.001 3.5E-08 76.0 14.5 102 570-676 11-166 (500)
326 2vdc_G Glutamate synthase [NAD 97.4 0.00019 6.6E-09 80.8 8.3 89 569-674 121-218 (456)
327 3rp8_A Flavoprotein monooxygen 97.4 0.00066 2.2E-08 75.4 12.5 98 570-677 23-183 (407)
328 1c0p_A D-amino acid oxidase; a 97.4 7.5E-05 2.6E-09 81.7 4.7 36 387-422 3-38 (363)
329 2gqw_A Ferredoxin reductase; f 97.4 0.00032 1.1E-08 78.0 9.7 100 570-679 7-117 (408)
330 1w4x_A Phenylacetone monooxyge 97.4 0.00071 2.4E-08 78.2 12.9 99 571-677 17-158 (542)
331 2bi7_A UDP-galactopyranose mut 97.4 8.8E-05 3E-09 81.8 4.9 42 390-437 3-44 (384)
332 2xdo_A TETX2 protein; tetracyc 97.4 0.00053 1.8E-08 76.0 11.1 101 570-678 26-185 (398)
333 1onf_A GR, grase, glutathione 97.4 0.00032 1.1E-08 80.3 9.5 99 391-546 177-277 (500)
334 3mxu_A Glycine cleavage system 97.4 0.00022 7.4E-09 64.9 6.3 47 18-64 54-101 (143)
335 3i3l_A Alkylhalidase CMLS; fla 97.4 0.0012 4E-08 76.9 14.3 101 570-675 23-188 (591)
336 3cp8_A TRNA uridine 5-carboxym 97.4 0.00083 2.9E-08 77.8 12.8 98 570-676 21-175 (641)
337 2uzz_A N-methyl-L-tryptophan o 97.4 0.00088 3E-08 73.3 12.6 54 613-675 151-204 (372)
338 2hqm_A GR, grase, glutathione 97.4 0.00029 1E-08 80.2 9.0 101 390-546 185-287 (479)
339 1ojt_A Surface protein; redox- 97.4 0.00016 5.3E-09 82.5 6.7 99 390-546 185-288 (482)
340 1y56_B Sarcosine oxidase; dehy 97.4 0.0011 3.9E-08 72.6 13.4 52 615-675 153-205 (382)
341 3ne5_B Cation efflux system pr 97.4 0.00024 8.1E-09 79.0 7.8 65 16-80 128-241 (413)
342 2bc0_A NADH oxidase; flavoprot 97.4 0.00014 4.8E-09 83.1 6.1 103 570-679 35-153 (490)
343 2vvm_A Monoamine oxidase N; FA 97.4 9.3E-05 3.2E-09 84.7 4.5 56 611-674 255-311 (495)
344 3ihm_A Styrene monooxygenase A 97.4 0.00012 4E-09 82.2 5.2 50 391-443 23-72 (430)
345 4dsg_A UDP-galactopyranose mut 97.4 0.00011 3.9E-09 83.6 5.1 43 389-437 8-51 (484)
346 2ivd_A PPO, PPOX, protoporphyr 97.4 9.2E-05 3.2E-09 84.3 4.3 42 390-437 16-57 (478)
347 3lov_A Protoporphyrinogen oxid 97.3 0.00011 3.6E-09 83.7 4.8 42 390-437 4-47 (475)
348 3ps9_A TRNA 5-methylaminomethy 97.3 0.0012 4.2E-08 78.4 14.2 53 615-675 421-473 (676)
349 1xdi_A RV3303C-LPDA; reductase 97.3 0.0003 1E-08 80.6 8.5 98 391-546 183-281 (499)
350 1fec_A Trypanothione reductase 97.3 0.00039 1.3E-08 79.4 9.3 99 391-546 188-290 (490)
351 3c96_A Flavin-containing monoo 97.3 0.00081 2.8E-08 74.8 11.7 102 571-677 5-171 (410)
352 1mo9_A ORF3; nucleotide bindin 97.3 0.00037 1.3E-08 80.2 9.1 99 391-546 215-318 (523)
353 2a8x_A Dihydrolipoyl dehydroge 97.3 0.00034 1.2E-08 79.2 8.6 98 391-546 172-273 (464)
354 2wpf_A Trypanothione reductase 97.3 0.00044 1.5E-08 79.0 9.4 99 391-546 192-294 (495)
355 3tzu_A GCVH, glycine cleavage 97.3 0.00025 8.6E-09 64.2 5.8 45 18-62 49-94 (137)
356 3cgb_A Pyridine nucleotide-dis 97.3 0.00029 9.8E-09 80.3 7.8 104 571-679 37-156 (480)
357 1dxl_A Dihydrolipoamide dehydr 97.3 0.00054 1.8E-08 77.7 9.8 100 391-546 178-281 (470)
358 2gag_B Heterotetrameric sarcos 97.3 0.0014 4.6E-08 72.6 12.6 54 613-675 176-230 (405)
359 3lad_A Dihydrolipoamide dehydr 97.3 0.00084 2.9E-08 76.3 11.1 101 390-546 180-282 (476)
360 3lnn_A Membrane fusion protein 97.3 0.0003 1E-08 76.8 7.0 65 16-80 64-205 (359)
361 2f1m_A Acriflavine resistance 97.3 9.6E-05 3.3E-09 77.6 2.9 65 16-80 29-166 (277)
362 3ces_A MNMG, tRNA uridine 5-ca 97.3 0.0011 3.7E-08 76.9 11.9 97 571-676 29-182 (651)
363 2qae_A Lipoamide, dihydrolipoy 97.3 0.0008 2.7E-08 76.3 10.7 100 391-546 175-278 (468)
364 3ic9_A Dihydrolipoamide dehydr 97.2 0.00088 3E-08 76.4 10.6 98 390-546 174-276 (492)
365 2zxi_A TRNA uridine 5-carboxym 97.2 0.0018 6E-08 74.9 12.9 98 571-677 28-182 (637)
366 2iid_A L-amino-acid oxidase; f 97.2 0.00016 5.5E-09 82.8 4.3 44 387-436 30-73 (498)
367 3l8k_A Dihydrolipoyl dehydroge 97.2 0.00063 2.1E-08 77.1 9.0 100 571-679 5-148 (466)
368 3urh_A Dihydrolipoyl dehydroge 97.2 0.001 3.5E-08 75.9 10.8 101 390-546 198-302 (491)
369 3fpp_A Macrolide-specific effl 97.2 0.00034 1.2E-08 75.7 6.3 65 16-80 38-190 (341)
370 3o0h_A Glutathione reductase; 97.2 0.00053 1.8E-08 78.1 8.2 99 390-546 191-290 (484)
371 1zk7_A HGII, reductase, mercur 97.2 0.00064 2.2E-08 77.0 8.8 97 390-546 176-273 (467)
372 4g6h_A Rotenone-insensitive NA 97.2 0.00031 1.1E-08 80.3 5.8 108 571-679 43-173 (502)
373 1y56_A Hypothetical protein PH 97.2 0.00048 1.6E-08 78.7 7.3 103 570-679 108-223 (493)
374 1m6i_A Programmed cell death p 97.1 0.00084 2.9E-08 76.6 9.3 100 390-546 180-284 (493)
375 2oln_A NIKD protein; flavoprot 97.1 0.0038 1.3E-07 68.9 14.2 50 616-674 158-207 (397)
376 3nyc_A D-arginine dehydrogenas 97.1 0.0018 6.1E-08 70.9 11.4 51 615-674 158-208 (381)
377 3dk9_A Grase, GR, glutathione 97.1 0.0013 4.4E-08 74.8 10.2 100 391-546 188-295 (478)
378 1b37_A Protein (polyamine oxid 97.1 0.00027 9.3E-09 80.3 4.5 43 389-437 3-46 (472)
379 3qfa_A Thioredoxin reductase 1 97.1 0.0021 7.1E-08 73.8 11.9 32 391-422 211-242 (519)
380 3dgz_A Thioredoxin reductase 2 97.1 0.0023 7.9E-08 72.8 11.9 100 391-546 186-289 (488)
381 3hgb_A Glycine cleavage system 97.1 0.00078 2.7E-08 62.0 6.3 37 26-62 68-104 (155)
382 1cjc_A Protein (adrenodoxin re 97.0 0.00049 1.7E-08 77.7 6.0 89 570-675 6-106 (460)
383 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.0011 3.8E-08 78.7 9.3 87 570-679 373-471 (671)
384 4dna_A Probable glutathione re 97.0 0.0013 4.4E-08 74.4 9.5 99 390-546 170-270 (463)
385 3dgh_A TRXR-1, thioredoxin red 97.0 0.0026 8.9E-08 72.3 11.9 99 391-545 188-290 (483)
386 3g3e_A D-amino-acid oxidase; F 97.0 0.0003 1E-08 76.5 3.5 32 391-422 1-38 (351)
387 2gmh_A Electron transfer flavo 97.0 0.0039 1.3E-07 72.6 12.9 106 571-676 36-218 (584)
388 4hb9_A Similarities with proba 97.0 0.004 1.4E-07 68.8 12.6 97 572-676 3-167 (412)
389 2qcu_A Aerobic glycerol-3-phos 97.0 0.0061 2.1E-07 69.6 14.2 59 613-675 151-210 (501)
390 3pvc_A TRNA 5-methylaminomethy 96.9 0.0045 1.5E-07 73.7 13.4 53 616-675 417-469 (689)
391 2aqj_A Tryptophan halogenase, 96.9 0.0048 1.7E-07 71.1 13.0 56 615-677 169-224 (538)
392 3c4a_A Probable tryptophan hyd 96.9 0.00052 1.8E-08 75.6 4.5 33 391-423 1-35 (381)
393 2x8g_A Thioredoxin glutathione 96.9 0.0037 1.2E-07 73.2 11.9 32 391-422 287-318 (598)
394 2gag_A Heterotetrameric sarcos 96.9 0.0045 1.5E-07 76.4 12.9 110 570-679 128-257 (965)
395 3dje_A Fructosyl amine: oxygen 96.9 0.0076 2.6E-07 67.4 13.8 55 613-675 163-221 (438)
396 3jsk_A Cypbp37 protein; octame 96.8 0.0091 3.1E-07 63.8 13.4 166 571-737 80-332 (344)
397 1vf7_A Multidrug resistance pr 96.8 0.00043 1.5E-08 75.8 3.1 65 16-80 50-173 (369)
398 2z3y_A Lysine-specific histone 96.8 0.00065 2.2E-08 80.5 4.8 40 390-435 107-146 (662)
399 4at0_A 3-ketosteroid-delta4-5a 96.8 0.0074 2.5E-07 69.0 13.3 59 612-675 203-264 (510)
400 2r0c_A REBC; flavin adenine di 96.8 0.0056 1.9E-07 70.7 12.1 98 571-675 27-196 (549)
401 1lqt_A FPRA; NADP+ derivative, 96.8 0.0009 3.1E-08 75.4 5.0 91 570-677 3-111 (456)
402 2xag_A Lysine-specific histone 96.7 0.00087 3E-08 80.9 5.1 41 389-435 277-317 (852)
403 3c4n_A Uncharacterized protein 96.7 0.0036 1.2E-07 69.4 9.6 32 571-602 37-70 (405)
404 1gte_A Dihydropyrimidine dehyd 96.7 0.0008 2.7E-08 83.7 4.5 93 570-677 187-290 (1025)
405 2dkh_A 3-hydroxybenzoate hydro 96.7 0.0078 2.7E-07 70.9 12.7 101 571-675 33-211 (639)
406 3k30_A Histamine dehydrogenase 96.7 0.005 1.7E-07 73.2 11.0 97 390-545 523-625 (690)
407 4dgk_A Phytoene dehydrogenase; 96.7 0.0091 3.1E-07 68.1 12.7 35 571-605 2-36 (501)
408 2e5v_A L-aspartate oxidase; ar 96.7 0.0082 2.8E-07 67.9 12.1 98 572-677 1-178 (472)
409 3ka7_A Oxidoreductase; structu 96.6 0.019 6.3E-07 63.8 14.4 53 618-679 203-256 (425)
410 2gjc_A Thiazole biosynthetic e 96.5 0.017 5.9E-07 61.2 12.6 165 571-736 66-321 (326)
411 3nrn_A Uncharacterized protein 96.5 0.014 4.9E-07 64.8 12.6 51 618-678 196-246 (421)
412 3c4a_A Probable tryptophan hyd 96.5 0.0021 7.1E-08 70.7 5.6 87 571-676 1-144 (381)
413 1pj5_A N,N-dimethylglycine oxi 96.5 0.016 5.5E-07 70.5 14.0 54 613-675 153-207 (830)
414 2e4g_A Tryptophan halogenase; 96.5 0.024 8.2E-07 65.4 14.5 55 616-677 199-254 (550)
415 1ju2_A HydroxynitrIle lyase; f 96.4 0.0014 4.9E-08 75.4 3.9 34 388-422 24-57 (536)
416 3da1_A Glycerol-3-phosphate de 96.4 0.029 9.8E-07 64.9 14.5 57 615-675 174-232 (561)
417 2pyx_A Tryptophan halogenase; 96.3 0.019 6.4E-07 65.9 12.3 55 616-677 180-235 (526)
418 1o94_A Tmadh, trimethylamine d 96.3 0.012 4.1E-07 70.4 11.0 33 390-422 528-562 (729)
419 3t37_A Probable dehydrogenase; 96.2 0.0019 6.6E-08 74.3 3.5 35 390-424 17-52 (526)
420 1kdg_A CDH, cellobiose dehydro 96.2 0.0025 8.5E-08 73.7 4.1 34 390-423 7-40 (546)
421 3q9t_A Choline dehydrogenase a 96.1 0.0025 8.6E-08 73.7 3.4 34 390-423 6-40 (577)
422 1pn0_A Phenol 2-monooxygenase; 96.0 0.036 1.2E-06 65.4 13.2 33 571-603 9-46 (665)
423 2weu_A Tryptophan 5-halogenase 96.0 0.045 1.5E-06 62.5 13.5 54 615-677 177-232 (511)
424 1kf6_A Fumarate reductase flav 96.0 0.034 1.2E-06 64.7 12.5 98 572-673 7-195 (602)
425 2rgh_A Alpha-glycerophosphate 95.9 0.067 2.3E-06 61.9 14.4 34 570-603 32-65 (571)
426 4dk0_A Putative MACA; alpha-ha 95.8 0.00052 1.8E-08 75.2 -3.7 63 16-78 39-189 (369)
427 3ayj_A Pro-enzyme of L-phenyla 95.8 0.0028 9.6E-08 74.4 2.3 33 390-422 56-96 (721)
428 3qvp_A Glucose oxidase; oxidor 95.8 0.004 1.4E-07 72.0 3.4 35 389-423 18-53 (583)
429 1vg0_A RAB proteins geranylger 95.7 0.0071 2.4E-07 70.1 4.9 60 610-676 377-438 (650)
430 3fim_B ARYL-alcohol oxidase; A 95.7 0.005 1.7E-07 71.0 3.6 34 390-423 2-36 (566)
431 2dn8_A Acetyl-COA carboxylase 95.7 0.0049 1.7E-07 53.3 2.6 47 34-80 5-51 (100)
432 1coy_A Cholesterol oxidase; ox 95.6 0.0062 2.1E-07 69.6 4.0 35 389-423 10-44 (507)
433 4b63_A L-ornithine N5 monooxyg 95.6 0.072 2.5E-06 60.6 12.8 105 572-679 41-218 (501)
434 3na6_A Succinylglutamate desuc 95.5 0.027 9.2E-07 60.1 8.5 60 19-80 266-329 (331)
435 1n4w_A CHOD, cholesterol oxida 95.4 0.0077 2.6E-07 68.7 4.1 34 390-423 5-38 (504)
436 3axb_A Putative oxidoreductase 95.4 0.077 2.6E-06 59.3 12.3 31 571-601 24-55 (448)
437 3cdx_A Succinylglutamatedesucc 95.4 0.032 1.1E-06 60.2 8.5 60 20-81 277-340 (354)
438 3i6d_A Protoporphyrinogen oxid 95.4 0.055 1.9E-06 60.8 10.9 34 571-604 6-45 (470)
439 2wdq_A Succinate dehydrogenase 95.3 0.17 5.7E-06 58.7 14.9 54 617-674 149-205 (588)
440 3fmc_A Putative succinylglutam 95.2 0.039 1.3E-06 59.7 8.6 60 19-80 299-364 (368)
441 4gut_A Lysine-specific histone 95.2 0.091 3.1E-06 62.8 12.5 36 570-605 336-371 (776)
442 2h88_A Succinate dehydrogenase 95.1 0.15 5.1E-06 59.4 13.6 32 572-603 20-51 (621)
443 1chu_A Protein (L-aspartate ox 95.0 0.06 2.1E-06 61.8 9.8 33 571-604 9-41 (540)
444 1z6h_A Biotin/lipoyl attachmen 95.0 0.028 9.5E-07 45.0 5.0 33 48-80 1-33 (72)
445 2jbv_A Choline oxidase; alcoho 94.9 0.011 3.8E-07 68.1 3.4 34 390-423 13-47 (546)
446 1gpe_A Protein (glucose oxidas 94.9 0.013 4.6E-07 68.0 3.9 34 390-423 24-58 (587)
447 2bs2_A Quinol-fumarate reducta 94.8 0.2 7E-06 58.7 13.7 32 572-603 7-38 (660)
448 2d5d_A Methylmalonyl-COA decar 94.7 0.043 1.5E-06 44.1 5.4 34 47-80 6-39 (74)
449 1dcz_A Transcarboxylase 1.3S s 94.6 0.038 1.3E-06 44.9 5.0 35 46-80 8-42 (77)
450 3kkj_A Amine oxidase, flavin-c 94.4 0.032 1.1E-06 57.0 5.1 34 572-605 4-37 (336)
451 3lk7_A UDP-N-acetylmuramoylala 94.4 0.11 3.6E-06 58.3 9.5 33 390-422 9-41 (451)
452 2k32_A A; NMR {Campylobacter j 94.2 0.051 1.7E-06 48.2 5.2 34 47-80 2-35 (116)
453 2kcc_A Acetyl-COA carboxylase 93.9 0.043 1.5E-06 45.5 3.9 35 47-81 6-40 (84)
454 1f3z_A EIIA-GLC, glucose-speci 93.1 0.093 3.2E-06 49.0 5.1 60 16-79 19-117 (161)
455 1jnr_A Adenylylsulfate reducta 93.0 0.46 1.6E-05 55.6 12.2 33 571-603 23-59 (643)
456 2qj8_A MLR6093 protein; struct 92.4 0.25 8.4E-06 52.7 8.0 60 18-79 265-328 (332)
457 2gpr_A Glucose-permease IIA co 92.1 0.12 4.3E-06 47.9 4.4 60 16-79 14-112 (154)
458 1lss_A TRK system potassium up 91.8 0.13 4.6E-06 46.7 4.4 32 391-422 5-36 (140)
459 2ejm_A Methylcrotonoyl-COA car 91.8 0.15 5.1E-06 43.7 4.4 35 46-80 14-48 (99)
460 1bdo_A Acetyl-COA carboxylase; 91.6 0.14 4.8E-06 41.8 3.9 34 47-80 5-45 (80)
461 2jku_A Propionyl-COA carboxyla 91.5 0.074 2.5E-06 45.1 2.0 35 46-80 25-59 (94)
462 3gyx_A Adenylylsulfate reducta 91.4 0.56 1.9E-05 55.0 10.2 32 571-602 23-60 (662)
463 2g1u_A Hypothetical protein TM 91.3 0.17 5.7E-06 47.3 4.6 33 390-422 19-51 (155)
464 3eag_A UDP-N-acetylmuramate:L- 91.3 0.14 4.8E-06 54.6 4.5 78 570-680 4-83 (326)
465 3llv_A Exopolyphosphatase-rela 91.0 0.18 6E-06 46.2 4.4 32 391-422 7-38 (141)
466 1ax3_A Iiaglc, glucose permeas 90.9 0.14 4.8E-06 47.9 3.5 60 16-79 19-117 (162)
467 3fwz_A Inner membrane protein 90.8 0.19 6.6E-06 46.0 4.4 32 391-422 8-39 (140)
468 2f1m_A Acriflavine resistance 90.8 0.24 8.1E-06 51.3 5.6 54 26-80 3-56 (277)
469 1id1_A Putative potassium chan 90.7 0.2 6.8E-06 46.6 4.5 33 390-422 3-35 (153)
470 3lk7_A UDP-N-acetylmuramoylala 90.6 0.16 5.4E-06 56.8 4.3 80 569-679 8-88 (451)
471 3ic5_A Putative saccharopine d 90.3 0.2 6.9E-06 43.9 3.9 32 391-422 6-38 (118)
472 2iid_A L-amino-acid oxidase; f 90.2 0.22 7.7E-06 56.3 5.2 61 569-629 32-110 (498)
473 3ihm_A Styrene monooxygenase A 89.9 0.24 8.3E-06 54.9 5.0 35 569-603 21-55 (430)
474 2l5t_A Lipoamide acyltransfera 89.8 0.16 5.5E-06 41.1 2.5 31 50-80 11-41 (77)
475 3fpz_A Thiazole biosynthetic e 89.7 0.17 5.8E-06 53.8 3.4 66 570-635 65-140 (326)
476 3fwz_A Inner membrane protein 89.6 0.8 2.7E-05 41.7 7.5 35 569-603 6-40 (140)
477 2xha_A NUSG, transcription ant 89.3 0.31 1.1E-05 46.5 4.5 32 22-59 22-53 (193)
478 3k7m_X 6-hydroxy-L-nicotine ox 88.9 0.34 1.2E-05 53.6 5.3 34 572-605 3-36 (431)
479 3g5s_A Methylenetetrahydrofola 88.8 0.34 1.2E-05 52.3 4.9 33 571-603 2-34 (443)
480 3nks_A Protoporphyrinogen oxid 88.8 0.33 1.1E-05 54.4 5.2 35 571-605 3-39 (477)
481 2g1u_A Hypothetical protein TM 88.7 0.5 1.7E-05 44.0 5.5 37 568-604 17-53 (155)
482 4gde_A UDP-galactopyranose mut 88.6 0.35 1.2E-05 54.8 5.2 36 571-606 11-47 (513)
483 3lnn_A Membrane fusion protein 88.5 0.33 1.1E-05 52.4 4.7 55 26-80 36-91 (359)
484 3crk_C Dihydrolipoyllysine-res 88.4 0.43 1.5E-05 39.6 4.3 30 52-81 17-46 (87)
485 2hmt_A YUAA protein; RCK, KTN, 88.3 0.32 1.1E-05 44.3 3.8 32 391-422 7-38 (144)
486 2e1m_A L-glutamate oxidase; L- 88.2 0.44 1.5E-05 51.6 5.4 37 569-605 43-80 (376)
487 1ghj_A E2, E2, the dihydrolipo 88.2 0.28 9.5E-06 39.9 2.9 31 51-81 12-42 (79)
488 1qjo_A Dihydrolipoamide acetyl 88.1 0.63 2.1E-05 37.8 5.1 28 54-81 14-41 (80)
489 2b9w_A Putative aminooxidase; 88.0 0.42 1.5E-05 52.7 5.3 36 570-605 6-42 (424)
490 3fpp_A Macrolide-specific effl 87.8 0.54 1.9E-05 50.2 5.8 55 25-80 11-65 (341)
491 2gf3_A MSOX, monomeric sarcosi 87.7 0.42 1.4E-05 51.9 4.9 34 571-604 4-37 (389)
492 1rsg_A FMS1 protein; FAD bindi 87.5 0.45 1.6E-05 54.1 5.3 35 571-605 9-44 (516)
493 2bcg_G Secretory pathway GDP d 87.5 0.45 1.5E-05 53.2 5.1 37 571-607 12-48 (453)
494 2jae_A L-amino acid oxidase; o 87.5 0.5 1.7E-05 53.2 5.6 37 570-606 11-47 (489)
495 2dnc_A Pyruvate dehydrogenase 87.4 0.61 2.1E-05 39.7 4.7 29 53-81 20-48 (98)
496 1c0p_A D-amino acid oxidase; a 87.2 0.5 1.7E-05 50.8 5.1 33 570-602 6-38 (363)
497 3dfz_A SIRC, precorrin-2 dehyd 87.2 0.31 1.1E-05 48.5 3.1 33 390-422 31-63 (223)
498 3llv_A Exopolyphosphatase-rela 87.2 1.2 4.2E-05 40.4 7.1 33 570-602 6-38 (141)
499 1s3e_A Amine oxidase [flavin-c 87.1 0.48 1.7E-05 53.9 5.2 35 571-605 5-39 (520)
500 1k8m_A E2 component of branche 87.0 0.67 2.3E-05 39.0 4.7 30 52-81 16-45 (93)
No 1
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=5.6e-82 Score=699.97 Aligned_cols=382 Identities=34% Similarity=0.585 Sum_probs=38.8
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ ++|+||+||++|+||+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+.|++|++|+.|+.+
T Consensus 1 M~-~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~ 79 (428)
T 3dva_I 1 MA-FEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAP 79 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC-eeEEcCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 44 78999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred Cccccc--------c---cc---cc-cc-----ccc---------cccccccchhHHHhhhhCCCCcccccCCCCCCCce
Q psy9583 81 ISKLSS--------K---TE---IK-NK-----KDI---------KNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRI 131 (866)
Q Consensus 81 ~~~~~~--------~---~~---~~-~~-----~~~---------~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i 131 (866)
++..++ . +. .+ +. ++. ...+..+||+||+||+|+||||+.| +||||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~~R~lA~e~gvdl~~v-~gtG~~GrI 158 (428)
T 3dva_I 80 GYENMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLV-QGTGKNGRV 158 (428)
T ss_dssp ------------------------------------------------CCCCCHHHHHHHHHTTCCGGGS-CCCSTTSCC
T ss_pred CccccccccccccccccCCCcccCCccccccCCCccccccccccccccccccCHHHHHHHHHcCCCHHHC-CCCCCCCce
Confidence 432100 0 00 00 00 000 0123578999999999999999999 899999999
Q ss_pred eehhHHhhhhhccccccccc-cccCCCccccccccCCCccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHH
Q psy9583 132 IKEDVLKVLSSIKNINEEKQ-EKYKPYLDSISIKNNSRLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDL 210 (866)
Q Consensus 132 ~~~Dv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~ 210 (866)
+++||++|+........... ....+..............+++||++|||+||++|++||+++||||++.++|+|+|+++
T Consensus 159 ~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~ 238 (428)
T 3dva_I 159 LKEDIDAFLAGGAKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAH 238 (428)
T ss_dssp CTTTTTTTSCC---------------------------------------------------------------------
T ss_pred eHHHHHHHhhccccccccccccccccCCCCccccccCCccccccCcHHHHHHHHHHHHhcccCCeEEEEEEEeHHHHHHH
Confidence 99999999754221110000 00000000000001112357899999999999999999999999999999999999999
Q ss_pred HHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeC--CeeEEccceeEEEEEecCCceEEeEEecCCCCCHHH
Q psy9583 211 RLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDG--NNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIAD 288 (866)
Q Consensus 211 r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~--~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~ 288 (866)
|+++++.++ +.|.|+||++||+||+++||++||+||++|++ +++++++++|||+||++++||++|||++++++|+.+
T Consensus 239 rk~~~~~~~-~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~e 317 (428)
T 3dva_I 239 RKKFKAIAA-EKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFA 317 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhhhhHh-hcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEeeeccCCCCCHHH
Confidence 999987543 45899999999999999999999999999988 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecc
Q psy9583 289 IEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSY 368 (866)
Q Consensus 289 i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~ 368 (866)
|+++++++.+++|+|+|.++|++||||||||+||+|+++|+|||||||+|||++|++.++|++.+|++++|++|+++|++
T Consensus 318 ia~~~~~l~~~ar~gkL~~~e~~ggtftISnlG~~G~~~ftpIin~pq~aIl~vG~i~~~pv~~~g~i~~r~~m~lsls~ 397 (428)
T 3dva_I 318 LAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVRDGEIVAAPMLALSLSF 397 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccceEeecCCCCceEEEccccEEEEEEECCEEEEeeeEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhhhhhhh
Q psy9583 369 DHRIIDGREAVLSLMSF 385 (866)
Q Consensus 369 dhr~~dg~~a~~~~~~~ 385 (866)
|||++||.++++|+...
T Consensus 398 DHRviDG~~aa~Fl~~l 414 (428)
T 3dva_I 398 DHRMIDGATAQKALNHI 414 (428)
T ss_dssp -----------------
T ss_pred cccccchHHHHHHHHHH
Confidence 99999999999887643
No 2
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=3.3e-73 Score=655.67 Aligned_cols=456 Identities=26% Similarity=0.435 Sum_probs=383.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCC--cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDN--EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~--~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||++||||||||+.||.+++++|.+|+|||+.+.. ..+..+||+|+|+||+|+|.++..++..+........+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 499999999999999999999999999999975211 113569999999999999999999988877765567789888
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcC----CceEEEecEEEEecCCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINK----TKETITAKYIIIATGSK 543 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~----~g~~i~~d~lViATGs~ 543 (866)
....+||.++..+.+..++.+...+...+++.+|+++.|...+.+. +++.+... +++++++|++|||||++
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~-----~~v~V~~~~~~~~~~~i~a~~iiIATGs~ 196 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDK-----NTVSYYLKGDLSKEETVTGKYILIATGCR 196 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEET-----TEEEEEEC--CCCEEEEEEEEEEECCCEE
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCC-----CcceEeecccCCceEEEeeeeEEeccCCC
Confidence 7788999999999999999999999999999999999999999887 88877542 33789999999999999
Q ss_pred CcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 544 ARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
|..||..+.....++|+++++++...|++++|||||++|+|+|+.|+++|.+||++.+ +++++.+|+++.+.+.+.|++
T Consensus 197 P~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~ 275 (542)
T 4b1b_A 197 PHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEE 275 (542)
T ss_dssp ECCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHH
T ss_pred CCCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccccchhHHHHHHHHHHh
Confidence 9988877666677899999999999999999999999999999999999999999987 578899999999999999999
Q ss_pred cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCc-EEeCCCCC
Q psy9583 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF-IIVNDNCE 702 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~-i~Vd~~l~ 702 (866)
+||.++++..+.+++..++.+.+.+. ++. .+.+|.|++|+|++||++.|+++.+|+.++.+|+ |.||+++|
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~--~~~------~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~ 347 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFS--DKT------SELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSC 347 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEET--TSC------EEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSB
T ss_pred hcceeecceEEEEEEecCCeEEEEEc--CCC------eEEEEEEEEcccccCCccccCcccceeeecccCceEecccccc
Confidence 99999999999999998888877775 554 7889999999999999999999999999987665 47899999
Q ss_pred CCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEe
Q psy9583 703 TNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFP 780 (866)
Q Consensus 703 Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~ 780 (866)
|++|+|||+|||+++ |++++.|.+||+++++||++.. ...++..+|+++|++|++++||+||+||++++.++.+..++
T Consensus 348 Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~ 427 (542)
T 4b1b_A 348 TNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFL 427 (542)
T ss_dssp CSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEE
T ss_pred ccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEE
Confidence 999999999999965 6899999999999999999865 45689999999999999999999999999988776666665
Q ss_pred cCCchhh-----------------hhcCCceEEEEEEE-ECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHcccc
Q psy9583 781 FLANSRA-----------------RILGETSGMVKILS-DMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARIC 842 (866)
Q Consensus 781 ~~~~~~~-----------------~~~~~~~g~~kli~-~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~ 842 (866)
+..+.++ .+.+++.||+|+|+ ++++++|||+|++|++|.|||+.+++||++++|++||++++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i 507 (542)
T 4b1b_A 428 QEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCI 507 (542)
T ss_dssp C-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC-
T ss_pred eeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccC
Confidence 5443322 12345679999986 56789999999999999999999999999999999999999
Q ss_pred ccCCChhHHHHHHHHHh
Q psy9583 843 HVHPSLSEAMKEAAMSI 859 (866)
Q Consensus 843 ~~~Pt~~e~~~~~~~~~ 859 (866)
|+|||++|+|.++++.+
T Consensus 508 ~~HPTlsE~l~~~~~t~ 524 (542)
T 4b1b_A 508 GIHPTDAESFMNLFVTI 524 (542)
T ss_dssp -----------------
T ss_pred CcCCCHHHHHHHHHHHH
Confidence 99999999999988765
No 3
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.3e-70 Score=629.91 Aligned_cols=461 Identities=45% Similarity=0.766 Sum_probs=423.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+|||||+||++||.+|++.|++|+|||+. +.+||+|.+.||+|++.++.....+......+..+++....
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~------~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~ 98 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKR------STYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVAN 98 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS------SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC------CCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCC
Confidence 599999999999999999999999999999987 68999999999999999999988888777656788888777
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARSF 547 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~~ 547 (866)
..++|..+..+.+.....+...+..++++.+++++.+...+.+. +.+.+.+.++ ..+.||+||||||+.|..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~-----~~~~v~~~~g~~~~~~~d~lViATGs~p~~i 173 (491)
T 3urh_A 99 PKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQ-----GKVSVTNEKGEEQVLEAKNVVIATGSDVAGI 173 (491)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSS-----SEEEEECTTSCEEEEECSEEEECCCEECCCB
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC-----CEEEEEeCCCceEEEEeCEEEEccCCCCCCC
Confidence 88999999999999999988888899999999999999998766 7788877665 6899999999999998777
Q ss_pred CCCc--CCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 548 PGVK--FDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 548 p~~~--~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
|+.. ..+..++++.+...+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.|++.|
T Consensus 174 pg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~g 253 (491)
T 3urh_A 174 PGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQG 253 (491)
T ss_dssp TTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTT
T ss_pred CCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCC
Confidence 7765 45667889999988888899999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCC-CCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKS-TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~-g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
|++++++++++++.+++.+.+.+.+.+ |. ..++++|.|++|+|++|++++++++..|++++++|+|.||+++||+
T Consensus 254 V~v~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~ 329 (491)
T 3urh_A 254 IDFKLGAKVTGAVKSGDGAKVTFEPVKGGE----ATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTS 329 (491)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEETTSCC----CEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCS
T ss_pred CEEEECCeEEEEEEeCCEEEEEEEecCCCc----eEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCC
Confidence 999999999999988888777776422 32 2479999999999999999988788899999999999999999999
Q ss_pred CCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 705 IPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 705 ~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
+|+|||+|||++.|++++.|..||++||+||+|...++++..+|+++|++|+++++|+||+||++.|+++.+.++++...
T Consensus 330 ~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~ 409 (491)
T 3urh_A 330 IAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTAN 409 (491)
T ss_dssp STTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTCCCEEECSSSCEEEEECCHHHHHHTTCCEEEEEEEGGGC
T ss_pred CCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCCcccCCCCCCEEEEccCCeEEEeCCHHHHHhCCCCEEEEEEecCcc
Confidence 99999999999999999999999999999999988778889999999999999999999999999999999999999999
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhcc
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSI 864 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 864 (866)
.++.+.+++.||+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++++|||++|++.++++.+.++.+
T Consensus 410 ~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~ 489 (491)
T 3urh_A 410 GRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPI 489 (491)
T ss_dssp HHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHHHHC---
T ss_pred hhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHHhhhccc
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999998887665
Q ss_pred C
Q psy9583 865 N 865 (866)
Q Consensus 865 ~ 865 (866)
|
T Consensus 490 ~ 490 (491)
T 3urh_A 490 H 490 (491)
T ss_dssp -
T ss_pred C
Confidence 5
No 4
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=5.6e-70 Score=629.00 Aligned_cols=466 Identities=47% Similarity=0.824 Sum_probs=428.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+|||||+||++||.+|++.|++|+|||+++.+.....+||+|.+.||+|++.++.....+......+..+++....
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~ 82 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGE 82 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 59999999999999999999999999999999754444456999999999999999999888888777666788888777
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARSF 547 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~~ 547 (866)
..++|..+..+.+.+.+.+...+..++++.+++++.+...+.+. +.+.+.+.++ ..+.||+||||||+.|..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~-----~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 83 VAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAG-----KKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECST-----TCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC-----CEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 78899999999999999888888888999999999999988766 6778876666 6899999999999999888
Q ss_pred CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCE
Q psy9583 548 PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 627 (866)
|+.+.....++++.++..+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.|++.||+
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 237 (476)
T 3lad_A 158 PPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLK 237 (476)
T ss_dssp TTSCCCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEE
T ss_pred CCCCCCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCE
Confidence 77776777889999998888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
+++++++++++.+++.+.+.+.+.+| ...+++|.|++|+|++|+++.+.++..|++++++|+|.||+++||++|+
T Consensus 238 v~~~~~v~~i~~~~~~~~v~~~~~~g-----~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~ 312 (476)
T 3lad_A 238 ILLGARVTGTEVKNKQVTVKFVDAEG-----EKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPG 312 (476)
T ss_dssp EEETCEEEEEEECSSCEEEEEESSSE-----EEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTT
T ss_pred EEECCEEEEEEEcCCEEEEEEEeCCC-----cEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCC
Confidence 99999999999887777777764333 2479999999999999999987788999999999999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhh
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRA 787 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~ 787 (866)
|||+|||++.+++++.|..||++||+||+|...++++..+|+++|++|+++++|+||+||++.|+++.+..+++..+.++
T Consensus 313 Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~ 392 (476)
T 3lad_A 313 VYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRA 392 (476)
T ss_dssp EEECGGGSSSCCCHHHHHHHHHHHHHHHHHCCCCCCTTCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHH
T ss_pred EEEEEccCCCcccHHHHHHHHHHHHHHhcCCCcccCCCCCCEEEECcCCEEEeeCCHHHHHhcCCCEEEEEEeccccchh
Confidence 99999999999999999999999999999988778899999999999999999999999999999999999999999999
Q ss_pred hhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 788 RILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 788 ~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
.+.+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.+.++.+|
T Consensus 393 ~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 470 (476)
T 3lad_A 393 MAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALAVSGHAIH 470 (476)
T ss_dssp HHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHHHHTTCCTT
T ss_pred eecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHHHhccccc
Confidence 999889999999999999999999999999999999999999999999999999999999999999999998877655
No 5
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=5.2e-68 Score=612.64 Aligned_cols=460 Identities=33% Similarity=0.574 Sum_probs=411.8
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+.+|||+|||||+||++||.+|++.|++|+|||+. +.+||+|.+.+|+|++.++......+.+.. +..+|+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~------~~~GG~~~~~g~~psk~ll~~~~~~~~~~~-~~~~gi~ 75 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERY------KTLGGVCLNVGCIPSKALLHNAAVIDEVRH-LAANGIK 75 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------SCSSHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC------CCCCCceeeecccchHHHHHHHHHHHHHHH-HHhCCcc
Confidence 555699999999999999999999999999999997 679999999999999999887777766644 5667777
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc------------eEEEec
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK------------ETITAK 534 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g------------~~i~~d 534 (866)
.....+++..+..+.......+...+..++++.+++++.++.++.+. +.+.+...++ .++.||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~-----~~v~v~~~~g~~~~~~~~~g~~~~i~ad 150 (482)
T 1ojt_A 76 YPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDP-----HHLEVSLTAGDAYEQAAPTGEKKIVAFK 150 (482)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEET-----TEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccC-----CEEEEEecCCcccccccccCcceEEEcC
Confidence 66667889999988888888888888888889999999999887654 6677754334 679999
Q ss_pred EEEEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHH
Q psy9583 535 YIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIA 614 (866)
Q Consensus 535 ~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~ 614 (866)
+||+|||+.|..||+.+.+. .+++++++..+...+++++|||||++|+|+|..|+++|.+|+++++.+++++.+++++.
T Consensus 151 ~lViAtGs~p~~~~~i~~~~-~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~ 229 (482)
T 1ojt_A 151 NCIIAAGSRVTKLPFIPEDP-RIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLV 229 (482)
T ss_dssp EEEECCCEEECCCSSCCCCT-TEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHH
T ss_pred EEEECCCCCCCCCCCCCccC-cEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHH
Confidence 99999999998776444333 57889988888878999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEee-CC-CCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCC
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSN-KS-TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNEN 692 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~-~~-g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 692 (866)
+.+.+.|++.||++++++.|++++.+++.+.+.+.+ .+ |. ++++|.|++|+|++||+++++++++|++++++
T Consensus 230 ~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~------~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~ 303 (482)
T 1ojt_A 230 KVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKE------PQRYDAVLVAAGRAPNGKLISAEKAGVAVTDR 303 (482)
T ss_dssp HHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSS------CEEESCEEECCCEEECGGGTTGGGTTCCCCTT
T ss_pred HHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCce------EEEcCEEEECcCCCcCCCCCChhhcCceeCCC
Confidence 999999999999999999999999877677777652 11 43 67899999999999999987778999999888
Q ss_pred CcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCC
Q psy9583 693 NFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNI 772 (866)
Q Consensus 693 G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~ 772 (866)
|+|.||++|||++|+|||+|||++.+++++.|.+||++||+||++...++++..+|+++|++|+++++|+||+||++.|+
T Consensus 304 G~i~vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~ 383 (482)
T 1ojt_A 304 GFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASAR 383 (482)
T ss_dssp SCCCCCTTSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECSSSCEEEEECCHHHHHHHTC
T ss_pred CCEeeCCCcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCC
Confidence 99999999999999999999999989999999999999999999987778888899999999999999999999999999
Q ss_pred cEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHH
Q psy9583 773 SYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAM 852 (866)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~ 852 (866)
++.+..+++....++.+.+++.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~ 463 (482)
T 1ojt_A 384 KITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESI 463 (482)
T ss_dssp CEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTTHH
T ss_pred CEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHH
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhccC
Q psy9583 853 KEAAMSIENRSIN 865 (866)
Q Consensus 853 ~~~~~~~~~~~~~ 865 (866)
.++++.+.++.+|
T Consensus 464 ~~a~~~~~~~~~~ 476 (482)
T 1ojt_A 464 GMAAEVALGTCTD 476 (482)
T ss_dssp HHHHHHHHTCCTT
T ss_pred HHHHHHHhccccc
Confidence 9999888765544
No 6
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.2e-67 Score=608.06 Aligned_cols=461 Identities=46% Similarity=0.802 Sum_probs=413.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc-c
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT-Q 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~-~ 468 (866)
+|||+|||||+||++||.+|++.|++|+|||++ +.+||+|.+.||+|++.++......+.+...+..+|++. .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~------~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~ 75 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKR------GALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGE 75 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC------CCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 489999999999999999999999999999997 689999999999999999888777666554355667764 4
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~ 546 (866)
....+|..+..+.+.+.+.+...+..++++.+++++.++.++++. +.+.+.+.+| ..+.||+||+|||+.|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~-----~~~~v~~~~G~~~~~~~d~lviAtG~~p~~ 150 (468)
T 2qae_A 76 GVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETA-----HSIRVNGLDGKQEMLETKKTIIATGSEPTE 150 (468)
T ss_dssp GCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEET-----TEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC-----CEEEEEecCCceEEEEcCEEEECCCCCcCC
Confidence 456789999988888888888888888888999999999888765 6777776666 789999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH-HHcC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL-NKQG 625 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l-~~~G 625 (866)
|+..+.+...+++++++..+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+|+++.+.+.+.| ++.|
T Consensus 151 p~~~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~g 230 (468)
T 2qae_A 151 LPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEK 230 (468)
T ss_dssp BTTBCCCSSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCcCceechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCC
Confidence 766655555688999998888889999999999999999999999999999999999999999999999999999 9999
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
|+++++++|++++.+++++.+.+...+|. ..++++|.|++|+|++|+++++.++++|++++++|+|.||++|||++
T Consensus 231 v~i~~~~~v~~i~~~~~~~~v~~~~~~g~----~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~ 306 (468)
T 2qae_A 231 MKFMTSTKVVGGTNNGDSVSLEVEGKNGK----RETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSI 306 (468)
T ss_dssp CEEECSCEEEEEEECSSSEEEEEECC-------EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSS
T ss_pred cEEEeCCEEEEEEEcCCeEEEEEEcCCCc----eEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCC
Confidence 99999999999998766666666522342 24799999999999999999877788899998889999999999999
Q ss_pred CCEEEecccCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCc
Q psy9583 706 PNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLAN 784 (866)
Q Consensus 706 ~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 784 (866)
|+|||+|||++ .+++++.|.+||++||+||++...++++..+|+++|++|+++++|++|++|++.|+++.+..+++...
T Consensus 307 ~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~ 386 (468)
T 2qae_A 307 PDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNAN 386 (468)
T ss_dssp TTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTCCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGC
T ss_pred CCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEecccc
Confidence 99999999999 89999999999999999999987777888999999999999999999999999999999999999999
Q ss_pred hhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhcc
Q psy9583 785 SRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSI 864 (866)
Q Consensus 785 ~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 864 (866)
.++.+.+++.+|+|+++|+++++|||+|++|+.+.|+|+.+++||++++|++||.+++++|||++|++.++++.+.++.+
T Consensus 387 ~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 466 (468)
T 2qae_A 387 SRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALFAKTI 466 (468)
T ss_dssp HHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHHHHHSCCS
T ss_pred hhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHHhcccc
Confidence 99998888899999999998999999999999999999999999999999999999999999999999999988877666
Q ss_pred C
Q psy9583 865 N 865 (866)
Q Consensus 865 ~ 865 (866)
|
T Consensus 467 ~ 467 (468)
T 2qae_A 467 N 467 (468)
T ss_dssp C
T ss_pred c
Confidence 5
No 7
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=4.7e-67 Score=603.95 Aligned_cols=459 Identities=48% Similarity=0.806 Sum_probs=412.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHh-hhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVK-NSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~-~~~~~~gi~~~ 468 (866)
++||+|||||+||++||.+|++.|++|+|||++ +.+||+|.+.||+|++.++.....++.+. ..+..+|++..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~------~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~ 79 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKN------ETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS 79 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS------SSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC------CCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC
Confidence 489999999999999999999999999999997 68999999999999999988777766554 12556777755
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCC-c-eEEEecEEEEecCCCCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKT-K-ETITAKYIIIATGSKARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~-g-~~i~~d~lViATGs~p~~ 546 (866)
....+|..+..+.+.+.+.+...+..++++.+++++.++.++++. +.+.+.+.+ + .++.||+||+|||+.|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~-----~~~~v~~~~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 80 EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGK-----NQVTATKADGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEET-----TEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC-----CEEEEEecCCCcEEEEeCEEEECCCCCCCC
Confidence 567889999998888888888888888889999999999887765 677787655 4 679999999999999988
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHHHHHHHcC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~~~l~~~G 625 (866)
|+.++.+...+++++++..+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.|++.|
T Consensus 155 p~i~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 234 (474)
T 1zmd_A 155 FPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQG 234 (474)
T ss_dssp CTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCcEEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCC
Confidence 7766655556889998888877899999999999999999999999999999999999998 899999999999999999
Q ss_pred CEEEeCceEEEEEEcCCe-EEEEEee---CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 626 LNIILNTKIHDIKINKEN-VLINYSN---KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~-~~v~~~~---~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
|++++++.|++++.++++ +.+.+.. .++ .++++|.|++|+|++|+++++.++++|++++++|+|.||++|
T Consensus 235 v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~------~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 308 (474)
T 1zmd_A 235 FKFKLNTKVTGATKKSDGKIDVSIEAASGGKA------EVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRF 308 (474)
T ss_dssp CEEECSEEEEEEEECTTSCEEEEEEETTSCCC------EEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTC
T ss_pred CEEEeCceEEEEEEcCCceEEEEEEecCCCCc------eEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCC
Confidence 999999999999987655 6666532 233 379999999999999999987678889999888999999999
Q ss_pred CCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEec
Q psy9583 702 ETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPF 781 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~ 781 (866)
||++|+|||+|||++.+++++.|.+||++||+||++...++++..+|+++|++|+++++|++|+||++.|+++.+..+++
T Consensus 309 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~ 388 (474)
T 1zmd_A 309 QTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPF 388 (474)
T ss_dssp BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEG
T ss_pred ccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEEec
Confidence 99999999999999989999999999999999999987777888999999999999999999999999999999999999
Q ss_pred CCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHh-h
Q psy9583 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSI-E 860 (866)
Q Consensus 782 ~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~-~ 860 (866)
....++.+.++..+|+|+++|+++++|||+|++|+.+.|+|+.+++||++++|++||.+++++|||++|++.++++.+ +
T Consensus 389 ~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~ 468 (474)
T 1zmd_A 389 AANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASF 468 (474)
T ss_dssp GGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHHHHHH
T ss_pred ccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHHHhc
Confidence 999999888888999999999989999999999999999999999999999999999999999999999999999887 6
Q ss_pred hhccC
Q psy9583 861 NRSIN 865 (866)
Q Consensus 861 ~~~~~ 865 (866)
++.+|
T Consensus 469 ~~~~~ 473 (474)
T 1zmd_A 469 GKSIN 473 (474)
T ss_dssp SCCSC
T ss_pred CCcCC
Confidence 66555
No 8
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=3.9e-67 Score=605.75 Aligned_cols=453 Identities=25% Similarity=0.392 Sum_probs=404.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+||||||||++||.+|++.|++|+|||++ .+||+|.+.||+|+|.++..++..+.... +..+|++...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-------~~GGtc~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~~~~ 79 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-------AYGTTCARVGCMPSKLLIAAADASYHASQ-TDLFGIQVDR 79 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-------CSSCHHHHHSHHHHHHHHHHHHHHHHHTC-GGGGTEECSE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-------CCCCcccccChhcCHHHHHHHHHHHHHhh-hhhcCcCCCC
Confidence 599999999999999999999999999999995 59999999999999999999888777665 6777887666
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
..++|..+..+.......+...+...+.. .+++++.+...+.+. +++.+ .++..+.||+||||||++|..|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~-----~~v~~--~~~~~~~~d~lViATGs~p~~p~ 152 (492)
T 3ic9_A 80 ISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDE-----HTLQV--DDHSQVIAKRIVIATGSRPNYPE 152 (492)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEET-----TEEEE--TTTEEEEEEEEEECCCEECCCCH
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecC-----CEEEE--cCCcEEEeCEEEEccCCCCcCCC
Confidence 67899888888777766665555444444 367889999888766 67766 45688999999999999999776
Q ss_pred CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 549 GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
.++.....++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++. |++
T Consensus 153 ~~~~~~~~v~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i 231 (492)
T 3ic9_A 153 FLAAAGSRLLTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYF 231 (492)
T ss_dssp HHHTTGGGEECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEE
T ss_pred CCCccCCcEEcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEE
Confidence 5544566789999999888889999999999999999999999999999999999999999999999999999998 999
Q ss_pred EeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeC-CCCCCCCCC
Q psy9583 629 ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVN-DNCETNIPN 707 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd-~~l~Ts~~~ 707 (866)
++++.+++++.+++++.+.+.+.+|. ..++++|.|++|+|++|+++++.++.+|++++++|+|.|| +++||++|+
T Consensus 232 ~~~~~v~~i~~~~~~v~v~~~~~~G~----~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~ 307 (492)
T 3ic9_A 232 DAKARVISTIEKEDAVEVIYFDKSGQ----KTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDH 307 (492)
T ss_dssp ETTCEEEEEEECSSSEEEEEECTTCC----EEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTT
T ss_pred EECCEEEEEEEcCCEEEEEEEeCCCc----eEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCC
Confidence 99999999998877777777533452 2489999999999999999998889999999999999999 999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhCC--CCCCCCCCccEEEEccCceeeeecCHHHHHhcC-----CcEEEEEEe
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ--KHSINFNALPFVIYTFPEIASVGKTEQYLKKHN-----ISYNVGIFP 780 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~--~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~-----~~~~~~~~~ 780 (866)
|||+|||++.+++++.|..||++||.||++. ....++..+|+++|++|+++++|+||+||++.+ +++.+.+++
T Consensus 308 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~ 387 (492)
T 3ic9_A 308 IFVAGDANNTLTLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVS 387 (492)
T ss_dssp EEECGGGGTSSCSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEE
T ss_pred EEEEEecCCCCccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEE
Confidence 9999999999999999999999999999973 344577889999999999999999999999984 789999999
Q ss_pred cCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhh
Q psy9583 781 FLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE 860 (866)
Q Consensus 781 ~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 860 (866)
+....++.+.+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++|+|||++|++.++++.+.
T Consensus 388 ~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~ 467 (492)
T 3ic9_A 388 FEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALRDAQ 467 (492)
T ss_dssp GGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHHHHH
T ss_pred eccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHHHHH
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred hh
Q psy9583 861 NR 862 (866)
Q Consensus 861 ~~ 862 (866)
.+
T Consensus 468 ~~ 469 (492)
T 3ic9_A 468 QK 469 (492)
T ss_dssp HT
T ss_pred HH
Confidence 53
No 9
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6e-67 Score=602.90 Aligned_cols=462 Identities=47% Similarity=0.800 Sum_probs=413.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.+|||+|||||+||++||.+|++.|++|+|||++ +.+||+|.+.+|+|++.++.....++.+...+..+|++..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~------~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~ 78 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKR------GALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS 78 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS------SSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEES
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC------CCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4699999999999999999999999999999997 6799999999999999988877776665443555677655
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~ 546 (866)
....+|..+..+.+.+.+.+...+..++++.+++++.++.++++. +.+.+.+.+| ..+.||+||+|||+.|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~-----~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 79 NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSP-----SEISVDTIEGENTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEET-----TEEEECCSSSCCEEEECSEEEECCCEEECC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC-----CEEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 556789999888888888887778888888899999999887655 6777766556 789999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
|+.++.+...++++.++..+...+++++|||||++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.|++.||
T Consensus 154 p~~~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv 233 (470)
T 1dxl_A 154 LPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGM 233 (470)
T ss_dssp BTTBCCCSSSEECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSC
T ss_pred CCCCCCCcccEEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCC
Confidence 77665555568888888888778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
++++++.|.+++.+++++.+.+... +|. ..++++|.|++|+|++||++++.++++|++++++|+|.||++|||++
T Consensus 234 ~i~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~ 309 (470)
T 1dxl_A 234 KFKLKTKVVGVDTSGDGVKLTVEPSAGGE----QTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNV 309 (470)
T ss_dssp CEECSEEEEEEECSSSSEEEEEEESSSCC----CEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSS
T ss_pred EEEeCCEEEEEEEcCCeEEEEEEecCCCc----ceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCC
Confidence 9999999999987766666666521 231 23799999999999999999877788999998889999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|+|||+|||++.+++++.|.+||++||+||++...++++..+|+++|++|+++++|++|++|++.|+++.+..+++....
T Consensus 310 ~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~ 389 (470)
T 1dxl_A 310 SGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANS 389 (470)
T ss_dssp TTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCH
T ss_pred CCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCcCCCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEEEecccch
Confidence 99999999999899999999999999999999877788889999999999999999999999999999999999999999
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
++.+.+++.+|+|+++|+++++|||+|++|+.+.|+|+.+++||++++|++||.+++++|||++|++.++++.++++.+|
T Consensus 390 ~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 469 (470)
T 1dxl_A 390 RAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIH 469 (470)
T ss_dssp HHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHHHHSCCSC
T ss_pred HHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHHHhcCccc
Confidence 99888888999999999989999999999999999999999999999999999999999999999999999888776665
No 10
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.5e-66 Score=600.67 Aligned_cols=464 Identities=45% Similarity=0.779 Sum_probs=412.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+.++||+|||||+||+++|..|++.|++|+|||+. +.+||+|.+.||+|++.++.....++.+...+..+|++
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~------~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~ 75 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKR------GKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGID 75 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEE
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC------CCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 445699999999999999999999999999999997 67999999999999999998888777766446667776
Q ss_pred c-cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eE------EEecEEE
Q psy9583 467 T-QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ET------ITAKYII 537 (866)
Q Consensus 467 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~------i~~d~lV 537 (866)
. ....+++..+..+...+...+...+..++++.+++++.++.++.+. +.+.+.+.+| .. +.||+||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~-----~~v~V~~~~G~~~~~~~~~~i~~d~lV 150 (478)
T 1v59_A 76 VNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDE-----TKIRVTPVDGLEGTVKEDHILDVKNII 150 (478)
T ss_dssp ECSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSS-----SEEEEECCTTCTTCCSSCEEEEEEEEE
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CeEEEEecCCCcccccccceEEeCEEE
Confidence 5 4456789998888888888888888888888999999999887644 6777766555 46 9999999
Q ss_pred EecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHH
Q psy9583 538 IATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKA 617 (866)
Q Consensus 538 iATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l 617 (866)
+|||+.|+.+|+.+..+..+++++++..+...+++++|||||++|+|+|..|+++|.+|+++++.+++++.+++++.+.+
T Consensus 151 iAtGs~p~~~~g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l 230 (478)
T 1v59_A 151 VATGSEVTPFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKAT 230 (478)
T ss_dssp ECCCEEECCCTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHH
T ss_pred ECcCCCCCCCCCCCCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHH
Confidence 99999997777765555568899998888778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCceEEEEEE--cCCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCc
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKI--NKENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF 694 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~ 694 (866)
.+.|++.||++++++.|+++.. +++.+.+.+.+. +|. ..++++|.|++|+|++|+++.+.++++|++++++|+
T Consensus 231 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~----~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~ 306 (478)
T 1v59_A 231 QKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNK----QENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGR 306 (478)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTE----EEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSC
T ss_pred HHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCC----ceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCC
Confidence 9999999999999999999987 555666666421 111 247999999999999999985447889999998999
Q ss_pred EEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcE
Q psy9583 695 IIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISY 774 (866)
Q Consensus 695 i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~ 774 (866)
|.||++|||++|+|||+|||++.+++++.|.+||++||+||++...++++..+|+++|++|+++++|++|+||++.|+++
T Consensus 307 i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~ 386 (478)
T 1v59_A 307 LVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDY 386 (478)
T ss_dssp BCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCE
T ss_pred EeECcCCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCE
Confidence 99999999999999999999998999999999999999999987666788899999999999999999999999999999
Q ss_pred EEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHH
Q psy9583 775 NVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKE 854 (866)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~ 854 (866)
.+..+++....++.+.+++.+|+|+++++++++|||+|++|+.+.|+|+.++++|++++|++||++++++|||++|++.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~ 466 (478)
T 1v59_A 387 KIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKE 466 (478)
T ss_dssp EEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHH
T ss_pred EEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHH
Confidence 99999999999998888888999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhccC
Q psy9583 855 AAMSIENRSIN 865 (866)
Q Consensus 855 ~~~~~~~~~~~ 865 (866)
+++.++++.+|
T Consensus 467 ~~~~~~~~~~~ 477 (478)
T 1v59_A 467 ANMAAYDKAIH 477 (478)
T ss_dssp HHHHHHSCCSC
T ss_pred HHHHHhcCcCC
Confidence 99888776665
No 11
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.1e-66 Score=599.11 Aligned_cols=457 Identities=36% Similarity=0.573 Sum_probs=407.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||+||++||..|++.|++|+|||+. .+||+|.+.+|+|++.++.....++.+...+..+++. ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-------~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~ 74 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-------YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GE 74 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-EC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-------CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CC
Confidence 489999999999999999999999999999984 6899999999999999988877776665345566776 44
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARSF 547 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~~ 547 (866)
..++|..+..+...+...+...+...+++.+++++.++.++++. +.+.+.+.+| .++.||+||+|||+.|+.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~-----~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 75 VTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADA-----NTLLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSS-----SEEEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC-----CeEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 56788888888777777777777888888999999999877544 6677766666 7899999999999999877
Q ss_pred CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCE
Q psy9583 548 PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 627 (866)
+.++.+.. ++++.+...+...+++++|||||++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.|++.||+
T Consensus 150 ~~~g~~~~-~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~ 228 (464)
T 2a8x_A 150 PGTSLSAN-VVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVT 228 (464)
T ss_dssp TTCCCBTT-EECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCE
T ss_pred CCCCCCce-EEecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCE
Confidence 65554433 78888888887789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
+++++.+++++.+++.+.+.+. .+|. ..++++|.|++|+|++||++++.++++|++++++|+|.||++|||++|+
T Consensus 229 i~~~~~v~~i~~~~~~~~v~~~-~~g~----~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~ 303 (464)
T 2a8x_A 229 ILTATKVESIADGGSQVTVTVT-KDGV----AQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGH 303 (464)
T ss_dssp EECSCEEEEEEECSSCEEEEEE-SSSC----EEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTT
T ss_pred EEeCcEEEEEEEcCCeEEEEEE-cCCc----eEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCC
Confidence 9999999999987666666664 1342 2479999999999999999987778889999888999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhC-CCCC-CCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCch
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISG-QKHS-INFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANS 785 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g-~~~~-~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~ 785 (866)
|||+|||++.+++++.|.+||++||+||++ ...+ ++|..+|+++|++|+++++|++|++|++.|+++.+..+++....
T Consensus 304 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~ 383 (464)
T 2a8x_A 304 IYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANA 383 (464)
T ss_dssp EEECGGGGCSSCSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCH
T ss_pred EEEeECcCCCccCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCEEEEEEEcchhh
Confidence 999999999899999999999999999998 6666 67888999999999999999999999999999999999999999
Q ss_pred hhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 786 RARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 786 ~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
++.+.+++.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++++.++++.+|
T Consensus 384 ~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 463 (464)
T 2a8x_A 384 KAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFHGLVGHMIN 463 (464)
T ss_dssp HHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHHHHHSCCSC
T ss_pred hhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHHHHhccccc
Confidence 99888888999999999999999999999999999999999999999999999999999999999999999888776665
No 12
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-66 Score=594.70 Aligned_cols=451 Identities=41% Similarity=0.676 Sum_probs=406.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.+|+|++.++...+.++.+.. +..+|+....
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-------~~gG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~~g~~~~~ 74 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-------NLGGVCLNVGCIPSKALISASHRYEQAKH-SEEMGIKAEN 74 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------CTTHHHHHTSHHHHHHHHHHHHHHHHHHT-CGGGTEECCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-------CCCCcCcCcCchhhHHHHHHHHHHHHHHH-HHhcCcccCC
Confidence 489999999999999999999999999999984 68999999999999999888777766653 5667777655
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~~p 548 (866)
...++..++.+.+.+.+.+...+..++++.+++++.++.++++. +.+.+.+.++ .++.||+||+|||+.|..|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~-----~~v~V~~~~G~~~i~~d~lViATGs~p~~~~ 149 (455)
T 1ebd_A 75 VTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDA-----NTVRVVNGDSAQTYTFKNAIIATGSRPIELP 149 (455)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEET-----TEEEEEETTEEEEEECSEEEECCCEEECCBT
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CeEEEEeCCCcEEEEeCEEEEecCCCCCCCC
Confidence 67789999888888888888888888889999999999888655 6777776666 78999999999999998776
Q ss_pred CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 549 GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
.++.+.. ++++.+...+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.||++
T Consensus 150 ~~g~~~~-v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i 228 (455)
T 1ebd_A 150 NFKFSNR-ILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEV 228 (455)
T ss_dssp TBCCCSS-EECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCccce-EecHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 6554443 788888888777899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCE
Q psy9583 629 ILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNI 708 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~V 708 (866)
++++.|++++.+++++.+.+.. +|. ..++++|.|++|+|++|+++++.++.+|++++++|+|.||++|||++|+|
T Consensus 229 ~~~~~v~~i~~~~~~~~v~~~~-~g~----~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~I 303 (455)
T 1ebd_A 229 VTNALAKGAEEREDGVTVTYEA-NGE----TKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNI 303 (455)
T ss_dssp EESEEEEEEEEETTEEEEEEEE-TTE----EEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred EeCCEEEEEEEeCCeEEEEEEe-CCc----eeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCE
Confidence 9999999999877666666642 221 24799999999999999999877788899998889999999999999999
Q ss_pred EEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhh
Q psy9583 709 YAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRAR 788 (866)
Q Consensus 709 yA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~ 788 (866)
||+|||++.+++++.|..||++||+||++...++++..+|+++|++|+++++|++|++|++.|+++.+..+++....++.
T Consensus 304 ya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 383 (455)
T 1ebd_A 304 FAIGDIVPGPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRAL 383 (455)
T ss_dssp EECGGGSSSCCCHHHHHHHHHHHHHHHTSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEEEEGGGCHHHH
T ss_pred EEEeccCCCcccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEEcCcchHHh
Confidence 99999999899999999999999999999877788889999999999999999999999999999999999999999998
Q ss_pred hcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHh
Q psy9583 789 ILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSI 859 (866)
Q Consensus 789 ~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 859 (866)
+.+++.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|.+.++++.+
T Consensus 384 ~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 454 (455)
T 1ebd_A 384 ALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVA 454 (455)
T ss_dssp HHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHHHHT
T ss_pred hcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHh
Confidence 88888999999999999999999999999999999999999999999999999999999999999998765
No 13
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.9e-66 Score=594.82 Aligned_cols=453 Identities=39% Similarity=0.673 Sum_probs=405.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|++.++.....++.+.. ...+|+. ..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~-------~~GG~~~~~g~iP~k~l~~~~~~~~~~~~-~~~~g~~-~~ 76 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAG-------EVGGVCLNVGCIPTKALLHAAETLHHLKV-AEGFGLK-AK 76 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------CTTHHHHHTSHHHHHHHHHHHHHHHHHHH-HGGGTEE-CC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC-------CCCCCCCCcChHHHHHHHHHHHHHHHHHh-HHhcCCC-CC
Confidence 599999999999999999999999999999996 49999999999999999888777766643 5667776 45
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
...+|..++.+.+.+.+.+...+..++++.+++++.++.++++. +.+.+. +.++.||+||||||++|+.||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~-----~~v~v~---g~~~~~d~lViATGs~p~~p~g 148 (464)
T 2eq6_A 77 PELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP-----KEVEVG---GERYGAKSLILATGSEPLELKG 148 (464)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET-----TEEEET---TEEEEEEEEEECCCEEECCBTT
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC-----CEEEEc---cEEEEeCEEEEcCCCCCCCCCC
Confidence 67899999998888888888778888889999999999887655 667663 5689999999999999987764
Q ss_pred CcCCCceEecchhhhcccc-CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 550 VKFDENLILSNKGALEMIN-VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 550 ~~~~~~~~~t~~~~~~~~~-~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
.+.. ..+++++++.++.. .+++++|||||++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.||++
T Consensus 149 i~~~-~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i 227 (464)
T 2eq6_A 149 FPFG-EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRV 227 (464)
T ss_dssp BCCS-SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCC-CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEE
Confidence 4322 25788888888877 789999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 629 ILNTKIHDIKINKENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
++++.|++++.+++.+.+.+... +|+ ..++++|.|++|+|++|+++++.++.+|++++++|+|.||+++||++|+
T Consensus 228 ~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~ 303 (464)
T 2eq6_A 228 RTKTKAVGYEKKKDGLHVRLEPAEGGE----GEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPG 303 (464)
T ss_dssp ECSEEEEEEEEETTEEEEEEEETTCCS----CEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTT
T ss_pred EcCCEEEEEEEeCCEEEEEEeecCCCc----eeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCC
Confidence 99999999998777776666521 132 2478999999999999999987678889999888999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhh
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRA 787 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~ 787 (866)
|||+|||++.+++++.|..||++||+||++....+++. +|++.|++|+++++|++|++|++.|+++.+..+++....++
T Consensus 304 Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~ 382 (464)
T 2eq6_A 304 VYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRA 382 (464)
T ss_dssp EEECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCC-CCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHH
T ss_pred EEEEeccCCCcccHHHHHHHHHHHHHHhcCCCcccCCC-CCeEEECCCCEEEEeCCHHHHHhcCCCEEEEEEEcCcchhh
Confidence 99999999999999999999999999999977667788 99999999999999999999999999999999999999999
Q ss_pred hhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 788 RILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 788 ~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
.+.+++.||+|+++|+++++|||+|++|+.+.|+|+.+++||++++|++||.+++++|||++|.+.++++.+++..+|
T Consensus 383 ~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 460 (464)
T 2eq6_A 383 LTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIH 460 (464)
T ss_dssp HHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHHHHTTCCSS
T ss_pred hhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHHhcCccc
Confidence 888888999999999889999999999999999999999999999999999999999999999999999888776554
No 14
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=4.6e-66 Score=593.83 Aligned_cols=446 Identities=26% Similarity=0.457 Sum_probs=397.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+++|||+|||||+||++||.+|++.|++|+|||+. +.+||+|.+.||+|++.++......+.+.. +..
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~------~~~GG~~~~~gciPsk~l~~~a~~~~~~~~-~~~---- 69 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPK------GELGGNCLYSGCVPSKTVREVIQTAWRLTN-IAN---- 69 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTT------SSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-HHC----
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECC------CCCCCcccccCCCchHHHHHHHHHHHHHHh-ccc----
Confidence 444699999999999999999999999999999976 689999999999999999988887776554 222
Q ss_pred ccccccCHHHHHHHHHHHHHhhh--hhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceE--EEecEEEEecCC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNN--SGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKET--ITAKYIIIATGS 542 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~--i~~d~lViATGs 542 (866)
....++|..+..+.+.+.+ +. ..+..++++.+++++.++...++. +.+.+.+.++.. +.||+||+|||+
T Consensus 70 -~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~-----~~~~V~~~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 70 -VKIPLDFSTVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDP-----THVIVKTDEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp -SCCCCCHHHHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEET-----TEEEEEETTSCEEEEEEEEEEECCCE
T ss_pred -CCCCcCHHHHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecC-----CeEEEEcCCCcEEEEecCEEEECCCC
Confidence 3346789999988888877 77 777888888999999998887776 677787777777 999999999999
Q ss_pred CCcCCCCCcCCCceEecchhhh----ccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcc-cHHHHHHH
Q psy9583 543 KARSFPGVKFDENLILSNKGAL----EMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTV-DEEIAKKA 617 (866)
Q Consensus 543 ~p~~~p~~~~~~~~~~t~~~~~----~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~-d~~~~~~l 617 (866)
.|..|+.++.+ .+++++++. .+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+ ++++.+.+
T Consensus 143 ~p~~p~i~G~~--~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l 220 (466)
T 3l8k_A 143 ETAKLRLPGVE--YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTL 220 (466)
T ss_dssp EECCCCCTTGG--GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHH
T ss_pred CccCCCCCCcc--ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHH
Confidence 99877666544 578888888 566678999999999999999999999999999999999999988 99999999
Q ss_pred HHHHHHcCCEEEeCceEEEEEEcC-CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEE
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKINK-ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFII 696 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~~~-~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 696 (866)
.+.|+ |++++++.|++++.++ +++.+.+...+|+ ..++++|.|++|+|++|++. |.++.+|++++++| |.
T Consensus 221 ~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~----~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~ 291 (466)
T 3l8k_A 221 LSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGS----KKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IV 291 (466)
T ss_dssp HHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSC----CEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BC
T ss_pred HhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCc----eEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-Ee
Confidence 98887 9999999999998876 6777766532343 34799999999999999999 66789999999999 99
Q ss_pred eCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC---CCCCCCCCccEEEEccCceeeeecCHHHHHhcCCc
Q psy9583 697 VNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ---KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNIS 773 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~---~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~ 773 (866)
||+++||++|+|||+|||++.+++++.|..||++||+||++. ...+++..+|+++|++|+++++|+||+||++.|++
T Consensus 292 vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~ 371 (466)
T 3l8k_A 292 VDETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIE 371 (466)
T ss_dssp CCTTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTCC
T ss_pred ECCCccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCCC
Confidence 999999999999999999998999999999999999999976 34567889999999999999999999999999999
Q ss_pred EEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHH
Q psy9583 774 YNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMK 853 (866)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~ 853 (866)
+.+..+++....++.+.+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~ 451 (466)
T 3l8k_A 372 IVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIIS 451 (466)
T ss_dssp EEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHH
T ss_pred EEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHH
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q psy9583 854 EAAMSIEN 861 (866)
Q Consensus 854 ~~~~~~~~ 861 (866)
++++.+..
T Consensus 452 ~~~~~~~~ 459 (466)
T 3l8k_A 452 YTARKVIE 459 (466)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99988754
No 15
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.5e-66 Score=591.83 Aligned_cols=443 Identities=24% Similarity=0.402 Sum_probs=399.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+|||||++|++||.+|++.|++|+|||+. .+||+|.+.||+|++.++...+....+.. +..+++....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~-------~~GG~~~~~gcip~k~l~~~~~~~~~~~~-~~~~g~~~~~ 76 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF-------RYGGTCVIRGCVPKKLYVYASQFAEHFED-AAGFGWTVGE 76 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTEEECC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC-------CCCCcccccCchhhHHHHHHHHHHHHHHH-HHhcCcccCC
Confidence 599999999999999999999999999999994 79999999999999999988887776655 6778887666
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~p 548 (866)
..++|..+..+.+.....+...+..++++.+++++.+...+++. +.+.+. .++..+.||++|+|||+.|. .|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~-----~~v~~~-~~~~~~~~d~lviAtG~~p~~~p~ 150 (463)
T 4dna_A 77 SRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGP-----NTVKLL-ASGKTVTAERIVIAVGGHPSPHDA 150 (463)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSS-----SEEEET-TTTEEEEEEEEEECCCEEECCCTT
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC-----CEEEEe-cCCeEEEeCEEEEecCCCcccCCC
Confidence 78899999999988888888888888888999999998877755 666663 35678999999999999998 665
Q ss_pred CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEE
Q psy9583 549 GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i 628 (866)
..+.. .++++++++.+...+++++|||+|++|+|+|..+.++|.+|+++++.+++++.+++++.+.+.+.|++.||++
T Consensus 151 i~G~~--~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 228 (463)
T 4dna_A 151 LPGHE--LCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRI 228 (463)
T ss_dssp STTGG--GCBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCcc--ccccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 54432 4678888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 629 ILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
++++.|++++.++++ +.+.. ..+| ++++|.|++|+|++|++.++.++..|++++++|+|.||+++||++|+
T Consensus 229 ~~~~~v~~i~~~~~~~~~v~~-~~~g-------~i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~ 300 (463)
T 4dna_A 229 LCEDIIQSVSADADGRRVATT-MKHG-------EIVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPG 300 (463)
T ss_dssp ECSCCEEEEEECTTSCEEEEE-SSSC-------EEEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTT
T ss_pred ECCCEEEEEEEcCCCEEEEEE-cCCC-------eEEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCC
Confidence 999999999987554 44441 2244 38999999999999999988788999999999999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchh
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSR 786 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~ 786 (866)
|||+|||++.+++++.|..||++||+||++.. ...++..+|+++|++|+++++|+||+||++.|.++.+.+.++..+.+
T Consensus 301 iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~ 380 (463)
T 4dna_A 301 IYALGDVTDRVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKA 380 (463)
T ss_dssp EEECSGGGSSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEEEEEEECCTTH
T ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCCCeEEEEEeccccch
Confidence 99999999999999999999999999999864 34578889999999999999999999999999999999999999999
Q ss_pred hhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 787 ARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 787 ~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
+.+.+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||++++++|||++|++.+++
T Consensus 381 ~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 450 (463)
T 4dna_A 381 TLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMY 450 (463)
T ss_dssp HHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCCC
T ss_pred hhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHh
Confidence 9998889999999999999999999999999999999999999999999999999999999999998766
No 16
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.1e-65 Score=593.15 Aligned_cols=448 Identities=27% Similarity=0.452 Sum_probs=395.8
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.+|||+|||||+||++||..|++.|++|+|||+ ..+||+|.+.||+|++.++......+.+.. ...+++...
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~-------~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~-~~~~g~~~~ 90 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVES-------HKLGGTCVNVGCVPKKVMWNTAVHSEFMHD-HADYGFPSC 90 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEES-------SCTTHHHHHHSHHHHHHHHHHHHHHHHHTT-TTTTTSCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEec-------CCCCCcccccCccchHHHHHHHHHHHHHHH-HHhcCccCC
Confidence 469999999999999999999999999999997 479999999999999999988887766654 667787776
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC-
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF- 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~- 547 (866)
...++|..+..+.+.+.+.+...+...+++.+++++.+...+.+. ..+.+.. ++.++.||+||||||+.|..|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~-----~~~~v~~-~g~~~~~d~lviAtG~~p~~p~ 164 (478)
T 3dk9_A 91 EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSD-----PKPTIEV-SGKKYTAPHILIATGGMPSTPH 164 (478)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSC-----SSCEEEE-TTEEEECSCEEECCCEEECCCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeC-----CeEEEEE-CCEEEEeeEEEEccCCCCCCCC
Confidence 678899999999999998888888888999999999999888755 3333432 457899999999999999877
Q ss_pred --CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcC
Q psy9583 548 --PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQG 625 (866)
Q Consensus 548 --p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~G 625 (866)
+.++.. .++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.|
T Consensus 165 ~~~i~G~~--~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~g 242 (478)
T 3dk9_A 165 ESQIPGAS--LGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAG 242 (478)
T ss_dssp TTTSTTGG--GSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTT
T ss_pred cCCCCCCc--eeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCC
Confidence 444432 4578888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCceEEEEEEcCCe--EEEEEeeCC-CCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCC
Q psy9583 626 LNIILNTKIHDIKINKEN--VLINYSNKS-TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE 702 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~--~~v~~~~~~-g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~ 702 (866)
|++++++.+++++.++++ +.+.+.+.+ |. .+..++++|.|++|+|++|+++.|.++.+|++++++|+|.||+++|
T Consensus 243 v~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~--~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~ 320 (478)
T 3dk9_A 243 VEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLP--VMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQN 320 (478)
T ss_dssp CEEETTEEEEEEEECSSSEEEEEEECCTTSCC--EEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCB
T ss_pred CEEEeCCEEEEEEEcCCCcEEEEEEccCCCCc--ccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcc
Confidence 999999999999876555 455554211 21 0014799999999999999999777889999999999999999999
Q ss_pred CCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC--CCCCCCCCccEEEEccCceeeeecCHHHHHhcC--CcEEEEE
Q psy9583 703 TNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ--KHSINFNALPFVIYTFPEIASVGKTEQYLKKHN--ISYNVGI 778 (866)
Q Consensus 703 Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~--~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~--~~~~~~~ 778 (866)
|++|||||+|||++.+++++.|..||++||+||++. ....++..+|+++|++|+++++|+||+||++.+ .++.+..
T Consensus 321 t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~ 400 (478)
T 3dk9_A 321 TNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYS 400 (478)
T ss_dssp CSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEE
T ss_pred cCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEE
Confidence 999999999999999999999999999999999987 345678899999999999999999999999885 5678888
Q ss_pred EecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHH
Q psy9583 779 FPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKE 854 (866)
Q Consensus 779 ~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~ 854 (866)
.++....++...+++.||+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|+|..
T Consensus 401 ~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 476 (478)
T 3dk9_A 401 TSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVT 476 (478)
T ss_dssp EEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGS
T ss_pred eecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHh
Confidence 8888888988888899999999999999999999999999999999999999999999999999999999998753
No 17
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.4e-65 Score=590.00 Aligned_cols=456 Identities=23% Similarity=0.390 Sum_probs=403.8
Q ss_pred ccceeeecCCccHHHHHHHHHHC---CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
+|||+|||||+||++||.+|++. |++|+|||++ . +||+|.+.||+|++.++.....++.+.. +..+|++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~------~-~GG~~~~~g~~psk~l~~~a~~~~~~~~-~~~~g~~ 73 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCD------G-IGGAAVLDDCVPSKTFIASTGLRTELRR-APHLGFH 73 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESS------C-TTHHHHHTSHHHHHHHHHHHHHHHHHTT-TTTTTBC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCC------C-cCCcccCcCccchHHHHHHHHHHHHHHH-HHhCCCc
Confidence 38999999999999999999999 9999999996 4 9999999999999999888777765544 5566776
Q ss_pred --ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEecccc-CcccEEEEEcCCce--EEEecEEEEecC
Q psy9583 467 --TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQ-NNFHEIQIINKTKE--TITAKYIIIATG 541 (866)
Q Consensus 467 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~-~~~~~v~v~~~~g~--~i~~d~lViATG 541 (866)
......+|..+..+.+.....+...+..++++.+++++.++...++..+ ...+.+.+.+.++. .+.||+||+|||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATG 153 (499)
T 1xdi_A 74 IDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATG 153 (499)
T ss_dssp ------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCC
Confidence 3445678999998888888888888888889999999999876654310 01256777665565 799999999999
Q ss_pred CCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH
Q psy9583 542 SKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621 (866)
Q Consensus 542 s~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l 621 (866)
+.|..|+..+.+...++++.++..+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.|
T Consensus 154 s~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 233 (499)
T 1xdi_A 154 ASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESF 233 (499)
T ss_dssp EEECCCGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHH
Confidence 99987765555555688888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 622 NKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
++.||++++++.|++++.+++++.+.+ .+|. ++++|.||+|+|++|+++++.++++|++++++|+|.||++|
T Consensus 234 ~~~GV~i~~~~~V~~i~~~~~~v~v~~--~~g~------~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~ 305 (499)
T 1xdi_A 234 AERGVRLFKNARAASVTRTGAGVLVTM--TDGR------TVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVS 305 (499)
T ss_dssp HHTTCEEETTCCEEEEEECSSSEEEEE--TTSC------EEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSS
T ss_pred HHCCCEEEeCCEEEEEEEeCCEEEEEE--CCCc------EEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCc
Confidence 999999999999999998766665544 3565 79999999999999999987778899999988999999999
Q ss_pred CCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC-CCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEe
Q psy9583 702 ETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ-KHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFP 780 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~ 780 (866)
||++|+|||+|||++.+++++.|.+||++||+||+|. ...+++..+|+++|++|+++++|++|++|++.|+++.+..++
T Consensus 306 ~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~ 385 (499)
T 1xdi_A 306 RTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLP 385 (499)
T ss_dssp BCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSSCEEEEEEE
T ss_pred ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCCCEEEEEEe
Confidence 9999999999999999999999999999999999997 456778889999999999999999999999999999999999
Q ss_pred cCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhh
Q psy9583 781 FLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE 860 (866)
Q Consensus 781 ~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 860 (866)
+....++.+.+++.||+|+++++++++|||+|++|+.+.|+|+.+++||++++|++||.+++++|||++|.+.++++.+.
T Consensus 386 ~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 465 (499)
T 1xdi_A 386 LRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAARRLM 465 (499)
T ss_dssp STTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHHHHC
T ss_pred cCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHHHHh
Confidence 99999999888889999999998899999999999999999999999999999999999999999999999999998765
Q ss_pred h
Q psy9583 861 N 861 (866)
Q Consensus 861 ~ 861 (866)
.
T Consensus 466 ~ 466 (499)
T 1xdi_A 466 A 466 (499)
T ss_dssp C
T ss_pred c
Confidence 4
No 18
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2e-65 Score=591.59 Aligned_cols=455 Identities=27% Similarity=0.443 Sum_probs=399.9
Q ss_pred cccccceeeecCCccHHHHHHHHHH-CCCeEEEEeccC--CCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQ-LGFKTACIDEWK--DNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEY 463 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~-~g~~V~liek~~--~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~ 463 (866)
|+++|||+|||||+||++||.+|++ .|++|+|||+.. .+..+..+||+|.+.||+|+|.++......+.+.. ...+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~-~~~~ 82 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRE-SAGF 82 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHH-HHTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhH-HHhc
Confidence 6556999999999999999999999 999999999210 00111578999999999999999988877766653 5667
Q ss_pred Ccccccc--ccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEc-CC-----ceEEEec
Q psy9583 464 GINTQNV--TLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIIN-KT-----KETITAK 534 (866)
Q Consensus 464 gi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~-~~-----g~~i~~d 534 (866)
++..... .++|..+..+.+.+.+.+...+...+++. +|+++.++..+++. +.+.+.. .+ ++.+.||
T Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~-----~~v~v~~~~~~~~~~~~~~~~d 157 (495)
T 2wpf_A 83 GWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESK-----NVVVVRETADPKSAVKERLQAD 157 (495)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEET-----TEEEEESSSSTTSCEEEEEEEE
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeC-----CEEEEeecCCccCCCCeEEEcC
Confidence 7765545 68999999999988888888888888888 99999999887765 7777752 23 5789999
Q ss_pred EEEEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhc---CCcEEEEecCCcCCCcccH
Q psy9583 535 YIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRL---GSEVTILEMSSNFLNTVDE 611 (866)
Q Consensus 535 ~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~---g~~Vtli~~~~~~l~~~d~ 611 (866)
+||||||+.|+.|+.++. ..++++++++.+...+++++|||+|++|+|+|..|.++ |.+|+++++.+++++.+|+
T Consensus 158 ~lViATGs~p~~p~i~G~--~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~ 235 (495)
T 2wpf_A 158 HILLATGSWPQMPAIPGI--EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDE 235 (495)
T ss_dssp EEEECCCEEECCCCCTTG--GGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCH
T ss_pred EEEEeCCCCcCCCCCCCc--cccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCH
Confidence 999999999987765443 34678888888888899999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeec
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN 690 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~ 690 (866)
++.+.+.+.|+++||++++++.|++++.+++ .+.+.+. +|. ++++|.||+|+|++|+++.|.++.+|++++
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~--~G~------~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~ 307 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFE--SGK------TLDVDVVMMAIGRIPRTNDLQLGNVGVKLT 307 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEET--TSC------EEEESEEEECSCEEECCGGGTGGGTTCCBC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEEC--CCc------EEEcCEEEECCCCcccccccchhhcCccCC
Confidence 9999999999999999999999999987654 3555554 665 799999999999999998666788999999
Q ss_pred CCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHh
Q psy9583 691 ENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKK 769 (866)
Q Consensus 691 ~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~ 769 (866)
++|+|.||+++||++|+|||+|||++.+++++.|.+||++||+||++.. ...++..+|+++|++|+++++|++|++|++
T Consensus 308 ~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~ 387 (495)
T 2wpf_A 308 PKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAK 387 (495)
T ss_dssp TTSSBCCCTTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHHHH
T ss_pred CCCCEEECCCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHh
Confidence 8999999999999999999999999888999999999999999999853 446788899999999999999999999998
Q ss_pred cCCcEEEEEEecCCchhhhhcCCceEE-EEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCCh
Q psy9583 770 HNISYNVGIFPFLANSRARILGETSGM-VKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSL 848 (866)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~g~-~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~ 848 (866)
.+.++.+...++....++...+++.+| +|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||+
T Consensus 388 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~ 467 (495)
T 2wpf_A 388 EFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTS 467 (495)
T ss_dssp HSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCS
T ss_pred cCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCh
Confidence 888888888999988888887788999 9999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q psy9583 849 SEAMKEAAM 857 (866)
Q Consensus 849 ~e~~~~~~~ 857 (866)
+|++.+++.
T Consensus 468 ~e~~~~~~~ 476 (495)
T 2wpf_A 468 AEELCSMRT 476 (495)
T ss_dssp GGGGGSCCS
T ss_pred HHHHHHHHH
Confidence 999987663
No 19
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=6.6e-65 Score=586.87 Aligned_cols=452 Identities=25% Similarity=0.426 Sum_probs=398.6
Q ss_pred ccceeeecCCccHHHHHHHHHH-CCCeEEEEeccCC--CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-LGFKTACIDEWKD--NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-~g~~V~liek~~~--~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
+|||+|||||+||++||.+|++ .|++|+|||+... ...+..+||+|.+.||+|+|.++..+...+.+.. ...+++.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~-~~~~g~~ 81 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRE-SAGFGWE 81 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHH-HHhcCcc
Confidence 5999999999999999999999 9999999993100 0011578999999999999999988887776654 6667776
Q ss_pred cccc--ccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEc---CCc---eEEEecEEE
Q psy9583 467 TQNV--TLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIIN---KTK---ETITAKYII 537 (866)
Q Consensus 467 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~---~~g---~~i~~d~lV 537 (866)
.... .++|..+..+.++....+...+...+++. +|+++.+++.+++. +.+.+.+ .++ ..+.||+||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~-----~~v~v~~~~~~~g~~~~~~~~d~lv 156 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDN-----HTVLVRESADPNSAVLETLDTEYIL 156 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEET-----TEEEEESSSSTTSCEEEEEEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeC-----CEEEEEeeccCCCCceEEEEcCEEE
Confidence 5444 67999999999988888888888888898 99999999887765 6788764 245 689999999
Q ss_pred EecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhc---CCcEEEEecCCcCCCcccHHHH
Q psy9583 538 IATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRL---GSEVTILEMSSNFLNTVDEEIA 614 (866)
Q Consensus 538 iATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~---g~~Vtli~~~~~~l~~~d~~~~ 614 (866)
||||+.|..|+.++. ..++++++++.+...+++++|||+|++|+|+|..|.++ |.+|+++++.+++++.+|+++.
T Consensus 157 iAtGs~p~~p~i~g~--~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~ 234 (490)
T 1fec_A 157 LATGSWPQHLGIEGD--DLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 234 (490)
T ss_dssp ECCCEEECCCCSBTG--GGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHH
T ss_pred EeCCCCCCCCCCCCc--cceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHH
Confidence 999999987765443 34678888888888899999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCC
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENN 693 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G 693 (866)
+.+.+.|++.||++++++.|++++.+++ .+.+.+. +|. ++++|.||+|+|++|+++.|.++.+|++++++|
T Consensus 235 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~--~G~------~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G 306 (490)
T 1fec_A 235 KQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFE--SGA------EADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNG 306 (490)
T ss_dssp HHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEET--TSC------EEEESEEEECSCEEESCTTSCGGGGTCCBCTTS
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEC--CCc------EEEcCEEEEccCCCcCccccCchhcCccCCCCC
Confidence 9999999999999999999999987654 3555554 665 799999999999999998666788999999899
Q ss_pred cEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcCC
Q psy9583 694 FIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNI 772 (866)
Q Consensus 694 ~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~ 772 (866)
+|.||++|||++|+|||+|||++.+++++.|.+||++||+||++.. ...++..+|+++|++|+++++|++|++|++.+.
T Consensus 307 ~I~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~ 386 (490)
T 1fec_A 307 AIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYD 386 (490)
T ss_dssp CBCCCTTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHHCS
T ss_pred CEEECCCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhcCC
Confidence 9999999999999999999999888999999999999999999853 446788899999999999999999999998888
Q ss_pred cEEEEEEecCCchhhhhcCCceEEE-EEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHH
Q psy9583 773 SYNVGIFPFLANSRARILGETSGMV-KILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEA 851 (866)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~g~~-kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~ 851 (866)
++.+...++....++...+++.+|+ |+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 466 (490)
T 1fec_A 387 QVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEE 466 (490)
T ss_dssp EEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred CEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHH
Confidence 8888888998888888777889999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q psy9583 852 MKEAAM 857 (866)
Q Consensus 852 ~~~~~~ 857 (866)
+.+++.
T Consensus 467 ~~~~~~ 472 (490)
T 1fec_A 467 LCSMRT 472 (490)
T ss_dssp GGSCCS
T ss_pred HHHHHH
Confidence 987664
No 20
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2.4e-65 Score=584.86 Aligned_cols=443 Identities=27% Similarity=0.461 Sum_probs=391.8
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+++|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|++.++..+.....+......+++.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-------~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~ 73 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-------ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFD 73 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEE
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-------CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCcc
Confidence 444699999999999999999999999999999995 6899999999999999988887766665235566776
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.....++|..+..+.+.....+...+...+++.+++++.++...++. +.+.+ ++..+.||+||||||+.|..
T Consensus 74 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~-----~~v~~---~g~~~~~d~lviAtGs~p~~ 145 (450)
T 1ges_A 74 TTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA-----KTLEV---NGETITADHILIATGGRPSH 145 (450)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET-----TEEEE---TTEEEEEEEEEECCCEEECC
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC-----CEEEE---CCEEEEeCEEEECCCCCCCC
Confidence 55567899999999888888888888888899999999998877655 66666 45789999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
|+.++. ..++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.||
T Consensus 146 p~i~g~--~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv 223 (450)
T 1ges_A 146 PDIPGV--EYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGP 223 (450)
T ss_dssp CCSTTG--GGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSC
T ss_pred CCCCCc--cceecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCC
Confidence 664443 246788888888778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
++++++.|++++.++++ +.+.+. +|. ++++|.|++|+|++|+++.|.++.+|++++++|+|.||+++||++
T Consensus 224 ~i~~~~~v~~i~~~~~~~~~v~~~--~g~------~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~ 295 (450)
T 1ges_A 224 QLHTNAIPKAVVKNTDGSLTLELE--DGR------SETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNI 295 (450)
T ss_dssp EEECSCCEEEEEECTTSCEEEEET--TSC------EEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSS
T ss_pred EEEeCCEEEEEEEeCCcEEEEEEC--CCc------EEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCC
Confidence 99999999999876543 555554 665 799999999999999998765788899999899999999999999
Q ss_pred CCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CC-CCCCCccEEEEccCceeeeecCHHHHHhc-C-CcEEEEEEec
Q psy9583 706 PNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HS-INFNALPFVIYTFPEIASVGKTEQYLKKH-N-ISYNVGIFPF 781 (866)
Q Consensus 706 ~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~-~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~-~~~~~~~~~~ 781 (866)
|+|||+|||++.+++++.|.+||++||+||++.. .. .++..+|+++|++|+++++|++|++|++. | .++.+...++
T Consensus 296 ~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~ 375 (450)
T 1ges_A 296 EGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSF 375 (450)
T ss_dssp TTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEE
T ss_pred CCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEEC
Confidence 9999999999888999999999999999999854 33 57788999999999999999999999987 5 6788888888
Q ss_pred CCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHH
Q psy9583 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKE 854 (866)
Q Consensus 782 ~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~ 854 (866)
....++...+++.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||++++++|||++|++.+
T Consensus 376 ~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 448 (450)
T 1ges_A 376 TAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT 448 (450)
T ss_dssp ECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred chhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHHHh
Confidence 8888888777789999999999999999999999999999999999999999999999999999999998864
No 21
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=9.1e-65 Score=581.78 Aligned_cols=453 Identities=44% Similarity=0.737 Sum_probs=409.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
|||+|||||+||++||.+|++.|++|+|||++ +.+||+|.+.||+|++.++.....++.+.. ..+|++....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~------~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~g~~~~~~ 73 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKE------KALGGTCLRVGCIPSKALLETTERIYEAKK--GLLGAKVKGV 73 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------SSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--CCTTEEECCE
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCC------CCCCCccceecchhHHHHHHHHHHHHHHhh--hcCCcccCCC
Confidence 89999999999999999999999999999997 679999999999999999888777766643 5567765556
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPGV 550 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~~ 550 (866)
..+|..+..+.+.+.+.+...+..++++.+++++.++.++++. +.+.+.+ ++.++.||+||+|||+.|..|+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~-----~~~~v~~-~g~~~~~d~lviAtG~~p~~~~~~ 147 (455)
T 2yqu_A 74 ELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSE-----RKVLVEE-TGEELEARYILIATGSAPLIPPWA 147 (455)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSS-----SEEEETT-TCCEEEEEEEEECCCEEECCCTTB
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC-----CeEEEee-CCEEEEecEEEECCCCCCCCCCCC
Confidence 7889999988888888887778888888899999999887655 6777865 567899999999999999887766
Q ss_pred cCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEe
Q psy9583 551 KFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIIL 630 (866)
Q Consensus 551 ~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~ 630 (866)
+.+...++++.++..+...+++++|||+|++|+|+|..|++.|.+|+++++.+++++.+++++.+.+.+.+++.||++++
T Consensus 148 g~~~~~v~~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~ 227 (455)
T 2yqu_A 148 QVDYERVVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRT 227 (455)
T ss_dssp CCCSSSEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEEC
T ss_pred CCCcCcEechHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEE
Confidence 65555688888888877788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEE
Q psy9583 631 NTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYA 710 (866)
Q Consensus 631 ~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA 710 (866)
+++|++++.+++++.+.+. +|. ++++|.||+|+|++|+.+++.++.+|++++++|+|.||++++|+.|+|||
T Consensus 228 ~~~V~~i~~~~~~v~v~~~--~g~------~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya 299 (455)
T 2yqu_A 228 GVRVTAVVPEAKGARVELE--GGE------VLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYA 299 (455)
T ss_dssp SCCEEEEEEETTEEEEEET--TSC------EEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEE
T ss_pred CCEEEEEEEeCCEEEEEEC--CCe------EEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEE
Confidence 9999999987777666553 555 79999999999999999887678889999888999999999999999999
Q ss_pred ecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhhhc
Q psy9583 711 IGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARIL 790 (866)
Q Consensus 711 ~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~ 790 (866)
+|||++.+++++.|..||++||+||++....+++..+|++.|++|+++++|++++++++.|+++.+...++....++.+.
T Consensus 300 ~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~ 379 (455)
T 2yqu_A 300 IGDVVRGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAM 379 (455)
T ss_dssp CGGGSSSCCCHHHHHHHHHHHHHHHHHSCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHH
T ss_pred EecCCCCccCHHHHHHhHHHHHHHHcCCCccCCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhc
Confidence 99999999999999999999999999877667788889999999999999999999999999999999999999999888
Q ss_pred CCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 791 GETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 791 ~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
+++.+|+|+++|+++++|||++++|+.+.|+|+.++++|++++|++||.+++++|||++|++.++++.++++.+|
T Consensus 380 ~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 454 (455)
T 2yqu_A 380 GETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAALAAWERPIH 454 (455)
T ss_dssp TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHHHHHSCCSC
T ss_pred CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHHhcCccc
Confidence 888899999999989999999999999999999999999999999999999999999999999999888776665
No 22
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.5e-65 Score=581.24 Aligned_cols=450 Identities=34% Similarity=0.594 Sum_probs=403.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhh---cCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFE---YGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~---~gi~ 466 (866)
+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|+|.++...+.++.+.. +.. +|++
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-------~~GG~~~~~g~~Psk~l~~~~~~~~~~~~-~~~~~~~g~~ 76 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-------ALGGTCLNIGCIPSKALIHVAEQFHQASR-FTEPSPLGIS 76 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHH-TTSCCTTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-------CCCCcCCCcCcHhHHHHHHHHHHHHHHhh-cccccccCcc
Confidence 489999999999999999999999999999984 79999999999999999988887776653 444 6777
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.....++|..+..+.+.+.+.+...+..++++.+|+++.++.++.+. +++.+. + ..+.||+||||||++|+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~-----~~v~v~--~-~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 77 VASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDG-----KQVEVD--G-QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEET-----TEEEET--T-EEEECSEEEECCCEEECC
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccC-----CEEEEe--e-EEEEeCEEEEeCCCCCCC
Confidence 66667899999999999988888888888999999999999888655 667662 3 689999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
||+.+.+. .++++.++..+...+++++|||||++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.||
T Consensus 149 ~~~~~~~~-~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv 227 (458)
T 1lvl_A 149 LPMLPLGG-PVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGI 227 (458)
T ss_dssp BTTBCCBT-TEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTC
T ss_pred CCCCCccC-cEecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 76544333 57888888888778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIP 706 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~ 706 (866)
++++++.|++++. + .+.+. ..+|. ..++++|.|++|+|++|+.+++.++.+|++++++ +|.||++|||++|
T Consensus 228 ~i~~~~~v~~i~~-~-~v~v~--~~~G~----~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~ 298 (458)
T 1lvl_A 228 ALHLGHSVEGYEN-G-CLLAN--DGKGG----QLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMH 298 (458)
T ss_dssp EEETTCEEEEEET-T-EEEEE--CSSSC----CCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSST
T ss_pred EEEECCEEEEEEe-C-CEEEE--ECCCc----eEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCC
Confidence 9999999999986 3 34433 23341 2379999999999999999987678889999877 8999999999999
Q ss_pred CEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchh
Q psy9583 707 NIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSR 786 (866)
Q Consensus 707 ~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~ 786 (866)
+|||+|||++.+++++.|..||++||+||++....+++..+|++.|++|+++++|+++++|++.|+++.+...++....+
T Consensus 299 ~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~ 378 (458)
T 1lvl_A 299 NVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGR 378 (458)
T ss_dssp TEEECGGGGCSSCCHHHHHHHHHHHHHHHTTCCCCCCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHH
T ss_pred CEEEeeccCCCcccHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchh
Confidence 99999999999999999999999999999997767778889999999999999999999999999999999999988899
Q ss_pred hhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhhhhccC
Q psy9583 787 ARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIENRSIN 865 (866)
Q Consensus 787 ~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~ 865 (866)
+.+.+++.||+|+++|+++++|||+|++|+.+.|+|+.++++|++++|++||.+++++|||++|.+.++++.+.++.+|
T Consensus 379 ~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~~~~~~~~ 457 (458)
T 1lvl_A 379 AMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAALRALGHALH 457 (458)
T ss_dssp HHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHHHHHTTCCSC
T ss_pred hhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHHHhccccc
Confidence 8888888999999999999999999999999999999999999999999999999999999999999999988776665
No 23
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3e-64 Score=579.42 Aligned_cols=451 Identities=26% Similarity=0.431 Sum_probs=396.7
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhc-Cc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEY-GI 465 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~-gi 465 (866)
|+.++||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|++.++.....+..... ...+ |+
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-------~~GG~~~~~g~ip~k~l~~~~~~~~~~~~-~~~~~g~ 72 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-------TIGGTCVNVGCVPSKIMIRAAHIAHLRRE-SPFDGGI 72 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-------STTHHHHHHSHHHHHHHHHHHHHHHHHHC-CTTTTTS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-------CCCccccCCCccchHHHHHHHHHHHHHhh-hhhcCCc
Confidence 445699999999999999999999999999999985 68999999999999998877766544433 2333 55
Q ss_pred cccccccCHHHHHHHHHHHHHhhhh-hHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecC
Q psy9583 466 NTQNVTLNLQKMLERKNNIIKKNNS-GILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATG 541 (866)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATG 541 (866)
+......++..+..+.......+.. .+..++++. +++++.+++..++. +.+.+.+.+| ..+.||+||+|||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~-----~~~~v~~~~g~~~~~~~d~lviAtG 147 (467)
T 1zk7_A 73 AATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDD-----QSLTVRLNEGGERVVMFDRCLVATG 147 (467)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEET-----TEEEEEETTSSEEEEECSEEEECCC
T ss_pred cCCCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccC-----CEEEEEeCCCceEEEEeCEEEEeCC
Confidence 5445567888888877766666553 345667777 99999998777765 6777776666 7899999999999
Q ss_pred CCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH
Q psy9583 542 SKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621 (866)
Q Consensus 542 s~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l 621 (866)
+.|+.|+.++.+...+++++++.++...+++++|||+|++|+|+|..|.++|.+|+++++.+++++ +++++.+.+.+.|
T Consensus 148 s~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l 226 (467)
T 1zk7_A 148 ASPAVPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAF 226 (467)
T ss_dssp EEECCCCCTTTTTSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHH
Confidence 999877666555556788888888888899999999999999999999999999999999999999 9999999999999
Q ss_pred HHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 622 NKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
++.||++++++.|++++.+++.+.+.+. +. ++++|.||+|+|++|+++++.++..+++++++|+|.||+++
T Consensus 227 ~~~Gv~i~~~~~v~~i~~~~~~~~v~~~---~~------~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~ 297 (467)
T 1zk7_A 227 RAEGIEVLEHTQASQVAHMDGEFVLTTT---HG------ELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGM 297 (467)
T ss_dssp HHTTCEEETTCCEEEEEEETTEEEEEET---TE------EEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTC
T ss_pred HhCCCEEEcCCEEEEEEEeCCEEEEEEC---Cc------EEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCc
Confidence 9999999999999999887665555442 32 78999999999999999876678889999888999999999
Q ss_pred CCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEec
Q psy9583 702 ETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPF 781 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~ 781 (866)
||+.|+|||+|||++.+.+++.|..||++||.||++....+++..+|++.|++|+++++|+++++|+..|+++.+..+++
T Consensus 298 ~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~ 377 (467)
T 1zk7_A 298 RTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTL 377 (467)
T ss_dssp BCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTCCCCCCCTTCEEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEG
T ss_pred ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCCCcccCCCCCCEEEecCCceEEEecCHHHHHhcCCCeEEEEEec
Confidence 99999999999999999999999999999999999876667788899999999999999999999999999999999999
Q ss_pred CCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHHHHhh
Q psy9583 782 LANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAAMSIE 860 (866)
Q Consensus 782 ~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 860 (866)
....++...+++.+|+|+++++++++|||+|++|+++.|+|+.++++|++++|++||++++++|||++|++.++++.+.
T Consensus 378 ~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~~ 456 (467)
T 1zk7_A 378 DNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFN 456 (467)
T ss_dssp GGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHHTTT
T ss_pred ccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHHh
Confidence 9889988877889999999999899999999999999999999999999999999999999999999999999997654
No 24
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=3.9e-65 Score=588.90 Aligned_cols=444 Identities=24% Similarity=0.416 Sum_probs=402.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.+|||+|||||+||++||.+|++.|++|+|||+. .+||+|.+.||+|++.++........+.. ...+++...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-------~~GG~~~~~gcip~k~l~~~a~~~~~~~~-~~~~g~~~~ 96 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-------RIGGTCVIRGCVPKKLYFYASQYAQEFSK-SIGFGWKYA 96 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHH-HGGGTBCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-------CCCCceeccCccccHHHHHHHHHHHHHHH-HHhCCcccC
Confidence 3699999999999999999999999999999994 79999999999999999998888776665 677888776
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-CC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR-SF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~-~~ 547 (866)
...++|..+..+.......+...+...+++.+++++.+...+++. +.+.+. .++..+.||++|+|||+.|. .|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~-----~~v~v~-~~~~~~~~d~lviAtG~~p~~~p 170 (484)
T 3o0h_A 97 DPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE-----HTLELS-VTGERISAEKILIATGAKIVSNS 170 (484)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET-----TEEEET-TTCCEEEEEEEEECCCEEECCC-
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC-----CEEEEe-cCCeEEEeCEEEEccCCCcccCC
Confidence 678899999999988888888888888999999999998888766 667663 24578999999999999988 66
Q ss_pred CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCE
Q psy9583 548 PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLN 627 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~ 627 (866)
+..+.. .++++++++.+...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+.+.+.+++.||+
T Consensus 171 ~i~G~~--~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 248 (484)
T 3o0h_A 171 AIKGSD--LCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGIS 248 (484)
T ss_dssp -CBTGG--GSBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCE
T ss_pred CCCCcc--ccccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCE
Confidence 544432 467888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPN 707 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~ 707 (866)
+++++.|++++.+++++.+.+. +|. ++++|.||+|+|++|++.++.++..|++++++|+|.||+++||++|+
T Consensus 249 i~~~~~V~~i~~~~~~v~v~~~--~g~------~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~ 320 (484)
T 3o0h_A 249 IIYEATVSQVQSTENCYNVVLT--NGQ------TICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSH 320 (484)
T ss_dssp EESSCCEEEEEECSSSEEEEET--TSC------EEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTT
T ss_pred EEeCCEEEEEEeeCCEEEEEEC--CCc------EEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCC
Confidence 9999999999988777766664 665 79999999999999999988778899999999999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchh
Q psy9583 708 IYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSR 786 (866)
Q Consensus 708 VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~ 786 (866)
|||+|||++.+++++.|..||++||+||++.. ...++..+|+++|++|+++++|+||+||++.|.++.+...++..+.+
T Consensus 321 Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~ 400 (484)
T 3o0h_A 321 IWAVGDVTGHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRN 400 (484)
T ss_dssp EEECGGGGTSCCCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHH
T ss_pred EEEEEecCCCCcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchh
Confidence 99999999989999999999999999999864 44678899999999999999999999999999999999999999999
Q ss_pred hhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 787 ARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 787 ~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
+.+.+++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+++
T Consensus 401 ~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 470 (484)
T 3o0h_A 401 VLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTMY 470 (484)
T ss_dssp HHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCCC
T ss_pred hccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHh
Confidence 9988889999999999999999999999999999999999999999999999999999999999998765
No 25
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.2e-64 Score=585.33 Aligned_cols=455 Identities=27% Similarity=0.413 Sum_probs=392.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC-Ccc-cccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD-NEE-NFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~-~~~-~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+|||+|||||+||++||.+|++.|++|+|||+.+. +++ +..+||+|.+.||+|++.++......+.... ...+|+..
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~-~~~~g~~~ 84 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRD-AHHYGWEV 84 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHH-HHHTTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHH-HHhcCccc
Confidence 59999999999999999999999999999997321 111 3579999999999999999888877666554 67778775
Q ss_pred c-ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCC
Q psy9583 468 Q-NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKA 544 (866)
Q Consensus 468 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p 544 (866)
. ...++|..+..+.+.+...+...+...+++.+|+++.+...+++. +.+.+.+.++ .++.||+||||||+.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~-----~~v~v~~~~g~~~~~~~d~lViATGs~p 159 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDE-----HTVRGVDKGGKATLLSAEHIVIATGGRP 159 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSS-----SEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC-----CeEEEEeCCCceEEEECCEEEEcCCCCC
Confidence 4 457899999999999999888888888999999999999988876 7888877655 6899999999999999
Q ss_pred cCCC-CCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 545 RSFP-GVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 545 ~~~p-~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
..|+ .++. ....+++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++. .+++.+|+++.+.+.+.|++
T Consensus 160 ~~p~~i~G~-~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~ 237 (488)
T 3dgz_A 160 RYPTQVKGA-LEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMES 237 (488)
T ss_dssp CCCSSCBTH-HHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCc-ccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccccCCHHHHHHHHHHHHH
Confidence 8776 4443 2345688888888888999999999999999999999999999999986 57889999999999999999
Q ss_pred cCCEEEeCceEEEEEEc-CCeEEEEEeeCC-CCccceeEEEeccEEEEeeccccCCCCCCccccCeeec-CCCcEEeCCC
Q psy9583 624 QGLNIILNTKIHDIKIN-KENVLINYSNKS-TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN-ENNFIIVNDN 700 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~-~~~~~v~~~~~~-g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~~G~i~Vd~~ 700 (866)
.||++++++.+.+++.. ++.+.+.+.+.+ |+ ..++++|.|++|+|++|+++++.++..|++++ ++|+|.||++
T Consensus 238 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~----~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~ 313 (488)
T 3dgz_A 238 HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGK----EDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQ 313 (488)
T ss_dssp TTCEEEETEEEEEEEECTTSCEEEEEEETTTTE----EEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTT
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCe----eEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCC
Confidence 99999999999999874 345667666432 32 33589999999999999999887889999998 7899999999
Q ss_pred CCCCCCCEEEecccC-CCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhc-C-CcEEE
Q psy9583 701 CETNIPNIYAIGDVV-RGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKH-N-ISYNV 776 (866)
Q Consensus 701 l~Ts~~~VyA~GD~a-~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~-~~~~~ 776 (866)
+||++|+|||+|||+ +.+++++.|..||++||+||++.. ...++..+|+++|++|+++++|+||+||+++ + ..+.+
T Consensus 314 ~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~ 393 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEV 393 (488)
T ss_dssp SBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEE
T ss_pred CccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEE
Confidence 999999999999998 678899999999999999999865 3457888999999999999999999999986 4 45777
Q ss_pred EEEecCCchhhhhcC-CceEEEEEEEE-CCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHH
Q psy9583 777 GIFPFLANSRARILG-ETSGMVKILSD-MKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKE 854 (866)
Q Consensus 777 ~~~~~~~~~~~~~~~-~~~g~~kli~~-~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~ 854 (866)
...+|....++.... .+.||+|+++| +++++|||+|++|++|.|+|+.+++||++++|++||++++|+|||++|++..
T Consensus 394 ~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 473 (488)
T 3dgz_A 394 YHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVK 473 (488)
T ss_dssp EEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHT
T ss_pred EEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHH
Confidence 776776655554333 36899999999 5899999999999999999999999999999999999999999999999987
Q ss_pred HH
Q psy9583 855 AA 856 (866)
Q Consensus 855 ~~ 856 (866)
++
T Consensus 474 ~~ 475 (488)
T 3dgz_A 474 LH 475 (488)
T ss_dssp CC
T ss_pred HH
Confidence 64
No 26
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.3e-64 Score=588.30 Aligned_cols=459 Identities=24% Similarity=0.397 Sum_probs=394.0
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCc--ccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNE--ENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYG 464 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~--~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~g 464 (866)
|..+|||+||||||||++||.+|++.|++|+|||+.+... ....+||+|.+.||+|++.++......+.... +..+|
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~-~~~~g 107 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQD-SRNYG 107 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHH-HHHTT
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHH-HHhcC
Confidence 3446999999999999999999999999999999852111 11379999999999999998888777665544 67788
Q ss_pred ccccc-cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecC
Q psy9583 465 INTQN-VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATG 541 (866)
Q Consensus 465 i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATG 541 (866)
+.... ..++|..+..+.+.+.+.+...+...+++.+|+++.+...+++. +.+.+.+.++ .++.||+||||||
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~-----~~v~v~~~~g~~~~i~~d~lViATG 182 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGP-----HRIKATNNKGKEKIYSAERFLIATG 182 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET-----TEEEEECTTCCCCEEEEEEEEECCC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC-----CEEEEEcCCCCEEEEECCEEEEECC
Confidence 77543 57899999999999998888888888999999999999999877 7888877555 4899999999999
Q ss_pred CCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH
Q psy9583 542 SKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621 (866)
Q Consensus 542 s~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l 621 (866)
++|+.|+.++. ...++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++ +.+++.+|+++.+.+.+.|
T Consensus 183 s~p~~p~i~G~-~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~-~~~l~~~d~~~~~~~~~~l 260 (519)
T 3qfa_A 183 ERPRYLGIPGD-KEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFDQDMANKIGEHM 260 (519)
T ss_dssp EEECCCCCTTH-HHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCSSTTSCHHHHHHHHHHH
T ss_pred CCcCCCCCCCc-cCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEec-ccccccCCHHHHHHHHHHH
Confidence 99987765542 235678888888888899999999999999999999999999999998 4788999999999999999
Q ss_pred HHcCCEEEeCceEEEEEEcC----CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeec-CCCcEE
Q psy9583 622 NKQGLNIILNTKIHDIKINK----ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN-ENNFII 696 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~----~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~~G~i~ 696 (866)
++.||++++++.++++...+ +.+.+.+...++. +...+++|.|++|+|++|++++|.++.+|++++ ++|+|.
T Consensus 261 ~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~---~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~ 337 (519)
T 3qfa_A 261 EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSE---EIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIP 337 (519)
T ss_dssp HHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSS---CEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBC
T ss_pred HHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCc---EEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEe
Confidence 99999999999888887533 4566666544442 124678999999999999999887899999998 579999
Q ss_pred eCCCCCCCCCCEEEecccC-CCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhcC--C
Q psy9583 697 VNDNCETNIPNIYAIGDVV-RGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKHN--I 772 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a-~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~--~ 772 (866)
||+++||++|+|||+|||+ +.+++++.|..||++||+||++.. ...++..+|+++|++|+++++|+||+||++.+ .
T Consensus 338 Vd~~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~ 417 (519)
T 3qfa_A 338 VTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEE 417 (519)
T ss_dssp CCTTSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGG
T ss_pred eCCCCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCC
Confidence 9999999999999999998 678999999999999999999865 44578889999999999999999999999863 3
Q ss_pred cEEEEEEecCCchhhhhcC-CceEEEEEEEEC-CCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhH
Q psy9583 773 SYNVGIFPFLANSRARILG-ETSGMVKILSDM-KSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSE 850 (866)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~-~~~g~~kli~~~-~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e 850 (866)
.+.+.+.++....++.... .+.||+|+|+|+ ++++|||+|++|++|.|+|+.+++||++++|++||++++++|||++|
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E 497 (519)
T 3qfa_A 418 NIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE 497 (519)
T ss_dssp GEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGG
T ss_pred CEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHH
Confidence 6777777776666655543 468999999997 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q psy9583 851 AMKEAA 856 (866)
Q Consensus 851 ~~~~~~ 856 (866)
++.+++
T Consensus 498 ~~~~~~ 503 (519)
T 3qfa_A 498 VFTTLS 503 (519)
T ss_dssp GGGGCC
T ss_pred HHHHHH
Confidence 998765
No 27
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-64 Score=582.17 Aligned_cols=446 Identities=28% Similarity=0.460 Sum_probs=389.1
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc-
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT- 467 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~- 467 (866)
++|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|++.++........+.. ...+++..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-------~~GG~~~n~gciP~k~l~~~~~~~~~~~~-~~~~g~~~~ 81 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-------ALGGTCVNVGCVPKKVMWYASDLATRVSH-ANEYGLYQN 81 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHTT-TTTTTBSTT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-------CcCCcCcccCcHHHHHHHHHHHHHHHHHh-HHhcCcccc
Confidence 3599999999999999999999999999999995 68999999999999999887776655543 44556543
Q ss_pred ----c-ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCce--EEEecEEEEec
Q psy9583 468 ----Q-NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKE--TITAKYIIIAT 540 (866)
Q Consensus 468 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~--~i~~d~lViAT 540 (866)
. ...++|..+..+.+.+...+...+...+++.+++++.++...++. +.+.+.+.++. .+.||+||+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~-----~~~~v~~~~g~~~~~~~d~lviAt 156 (479)
T 2hqm_A 82 LPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKD-----GNVEVQKRDNTTEVYSANHILVAT 156 (479)
T ss_dssp SCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTT-----SCEEEEESSSCCEEEEEEEEEECC
T ss_pred cccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC-----CEEEEEeCCCcEEEEEeCEEEEcC
Confidence 2 356789999988888888888888888889999999998776654 56777655554 89999999999
Q ss_pred CCCCcCC-CCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHH
Q psy9583 541 GSKARSF-PGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFH 619 (866)
Q Consensus 541 Gs~p~~~-p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~ 619 (866)
|+.|..| +.++. ..++++++++.+...+++++|||||++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+
T Consensus 157 Gs~p~~p~~i~g~--~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~ 234 (479)
T 2hqm_A 157 GGKAIFPENIPGF--ELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITD 234 (479)
T ss_dssp CEEECCCTTSTTG--GGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred CCCCCCCCCCCCc--ccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHH
Confidence 9999876 54443 24577888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCe--EEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEe
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKEN--VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIV 697 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~V 697 (866)
.|++.||+++++++|++++.++++ +.+.+. +|. .++++|.|++|+|++|++ .|.++.+|++++++|+|.|
T Consensus 235 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~--~G~-----~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~v 306 (479)
T 2hqm_A 235 HYVKEGINVHKLSKIVKVEKNVETDKLKIHMN--DSK-----SIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIA 306 (479)
T ss_dssp HHHHHTCEEECSCCEEEEEECC-CCCEEEEET--TSC-----EEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCC
T ss_pred HHHhCCeEEEeCCEEEEEEEcCCCcEEEEEEC--CCc-----EEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeE
Confidence 999999999999999999876544 555554 551 279999999999999999 4446888999998999999
Q ss_pred CCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC----CCCCCCCccEEEEccCceeeeecCHHHHHhc-C-
Q psy9583 698 NDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK----HSINFNALPFVIYTFPEIASVGKTEQYLKKH-N- 771 (866)
Q Consensus 698 d~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~----~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~- 771 (866)
|++|||++|+|||+|||++.+.+++.|.+||++||+||++.. ...++..+|+++|++|+++++|++|++|++. +
T Consensus 307 d~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~ 386 (479)
T 2hqm_A 307 DEYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGK 386 (479)
T ss_dssp CTTCBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCG
T ss_pred CCCCccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCC
Confidence 999999999999999999888999999999999999999754 3456778999999999999999999999887 4
Q ss_pred CcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHH
Q psy9583 772 ISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEA 851 (866)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~ 851 (866)
.++.+...++....++...+++.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 466 (479)
T 2hqm_A 387 ENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEE 466 (479)
T ss_dssp GGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred CcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHH
Confidence 35888888999898888777889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q psy9583 852 MKEAAM 857 (866)
Q Consensus 852 ~~~~~~ 857 (866)
+.+++.
T Consensus 467 ~~~~~~ 472 (479)
T 2hqm_A 467 LVTMRG 472 (479)
T ss_dssp GGSCC-
T ss_pred HHHHHH
Confidence 976653
No 28
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=4.1e-64 Score=576.47 Aligned_cols=445 Identities=26% Similarity=0.453 Sum_probs=391.8
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+++|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|++.++........+.+ ...+++.
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-------~~GG~~~~~gciP~k~l~~~a~~~~~~~~-~~~~g~~ 72 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-------ALGGTCVNVGCVPKKVMWYASHLAEAVRD-APGFGVQ 72 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTBC
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-------CCCCcCcCcCchhHHHHHHHHHHHHHHhh-hhhcCcc
Confidence 445699999999999999999999999999999995 68999999999999999888777666543 5566776
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
......+|..+..+.+.+...+...+...+++.+++++.++...++. +.+.+ ++.++.||+||||||+.|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~-----~~v~~---~g~~~~~d~lviAtGs~p~~ 144 (463)
T 2r9z_A 73 ASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA-----HTIEV---EGQRLSADHIVIATGGRPIV 144 (463)
T ss_dssp CC---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET-----TEEEE---TTEEEEEEEEEECCCEEECC
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC-----CEEEE---CCEEEEcCEEEECCCCCCCC
Confidence 55567899999999888888888888888899999999998877655 66666 45789999999999999987
Q ss_pred CCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 547 FPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
|+.++. ..++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+.+.|++.||
T Consensus 145 p~i~G~--~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv 222 (463)
T 2r9z_A 145 PRLPGA--ELGITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGI 222 (463)
T ss_dssp CSCTTG--GGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCc--cceecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 665443 246788888887778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIP 706 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~ 706 (866)
++++++.|++++.+++++.+.+. +|. . ++++|.|++|+|++|+++.|.++++|++++++|+|.||+++||++|
T Consensus 223 ~i~~~~~v~~i~~~~~~~~v~~~--~G~----~-~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~ 295 (463)
T 2r9z_A 223 ETHLEFAVAALERDAQGTTLVAQ--DGT----R-LEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVP 295 (463)
T ss_dssp EEESSCCEEEEEEETTEEEEEET--TCC----E-EEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSST
T ss_pred EEEeCCEEEEEEEeCCeEEEEEe--CCc----E-EEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCC
Confidence 99999999999987666666554 553 1 6899999999999999987656888999998999999999999999
Q ss_pred CEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC-CC-CCCCCccEEEEccCceeeeecCHHHHHhc-CCcEEEEEEecCC
Q psy9583 707 NIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK-HS-INFNALPFVIYTFPEIASVGKTEQYLKKH-NISYNVGIFPFLA 783 (866)
Q Consensus 707 ~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~-~~-~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~~~~~~~~~~~~ 783 (866)
+|||+|||++.+.+++.|.+||+++|.||++.. .. .++..+|+++|++|+++++|++|++|++. |.++.+...++..
T Consensus 296 ~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~ 375 (463)
T 2r9z_A 296 GVYALGDITGRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLGDVLTVYETSFTP 375 (463)
T ss_dssp TEEECGGGGTSCCCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCSCEEEEEEEECC
T ss_pred CEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEEEEEEccc
Confidence 999999999889999999999999999999854 33 56788999999999999999999999987 6788888888888
Q ss_pred chhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 784 NSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 784 ~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
..++...+.+.+|+|+++++++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.+++
T Consensus 376 ~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 448 (463)
T 2r9z_A 376 MRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLK 448 (463)
T ss_dssp GGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGCCC
T ss_pred chhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHH
Confidence 8888777778999999999999999999999999999999999999999999999999999999999987654
No 29
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=7.5e-64 Score=578.36 Aligned_cols=455 Identities=26% Similarity=0.401 Sum_probs=390.2
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC-C--cccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD-N--EENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGI 465 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~-~--~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi 465 (866)
.+|||+|||||+||++||.+|++.|++|+|||+... + .....+||+|.+.||+|++.+.......+.... ...+|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~-~~~~g~ 86 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHE-AAAYGW 86 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHH-HHHTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHH-HHhcCc
Confidence 359999999999999999999999999999995311 1 111258999999999999999888877665554 667777
Q ss_pred cccc-cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc-eEEEecEEEEecCCC
Q psy9583 466 NTQN-VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK-ETITAKYIIIATGSK 543 (866)
Q Consensus 466 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~ 543 (866)
.... ..++|..+..+.+.+.+.+...+...+++.+|+++.+...+.+. +.+.+.+.++ .++.||+||||||+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~-----~~v~v~~~~g~~~~~~d~lviATGs~ 161 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDS-----HTLLAKLKSGERTITAQTFVIAVGGR 161 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET-----TEEEEECTTCCEEEEEEEEEECCCEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccC-----CEEEEEeCCCeEEEEcCEEEEeCCCC
Confidence 6543 57899999999999988888888888899999999999998877 7888877656 579999999999999
Q ss_pred CcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 544 ARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
|..|+.++.. ...+++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++ +.+++.+++++.+.+.+.|++
T Consensus 162 p~~p~i~G~~-~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~ 239 (483)
T 3dgh_A 162 PRYPDIPGAV-EYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEE 239 (483)
T ss_dssp ECCCSSTTHH-HHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHH
T ss_pred cCCCCCCCcc-cccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHh
Confidence 9877555432 34568888888888899999999999999999999999999999998 578889999999999999999
Q ss_pred cCCEEEeCceEEEEEEcCC-eEEEEEeeCC-CCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 624 QGLNIILNTKIHDIKINKE-NVLINYSNKS-TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~-g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
.||++++++.+++++.+++ .+.+.+.+.+ +. ..++++|.|++|+|++|+++++.++.+|+++++ |+|.||+++
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~----~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~ 314 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGE----ESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQE 314 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCC----EEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTC
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCc----eeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCC
Confidence 9999999999999987544 4667666432 22 347899999999999999999877999999997 999999999
Q ss_pred CCCCCCEEEecccC-CCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhc-C-CcEEEE
Q psy9583 702 ETNIPNIYAIGDVV-RGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKH-N-ISYNVG 777 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a-~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~-~~~~~~ 777 (866)
||++|+|||+|||+ +.+.+++.|..||++||+||+|.. ...++..+|+++|++|+++++|+||+||+++ + ..+.+.
T Consensus 315 ~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~ 394 (483)
T 3dgh_A 315 ATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVF 394 (483)
T ss_dssp BCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEE
T ss_pred ccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEE
Confidence 99999999999998 568999999999999999999865 3467888999999999999999999999986 3 357776
Q ss_pred EEecCCchhhhh-cCCceEEEEEEEECC-CCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHH
Q psy9583 778 IFPFLANSRARI-LGETSGMVKILSDMK-SDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEA 855 (866)
Q Consensus 778 ~~~~~~~~~~~~-~~~~~g~~kli~~~~-~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~ 855 (866)
..++....++.. .+.+.||+|+++|++ +++|||+|++|++|.|+|+.+++||++++|++||++++|+|||++|++.++
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 474 (483)
T 3dgh_A 395 HGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRL 474 (483)
T ss_dssp EEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGGC
T ss_pred EEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHH
Confidence 666655544322 235689999999986 899999999999999999999999999999999999999999999999765
Q ss_pred H
Q psy9583 856 A 856 (866)
Q Consensus 856 ~ 856 (866)
.
T Consensus 475 ~ 475 (483)
T 3dgh_A 475 A 475 (483)
T ss_dssp C
T ss_pred H
Confidence 4
No 30
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.2e-63 Score=573.66 Aligned_cols=441 Identities=28% Similarity=0.468 Sum_probs=376.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+|||||+||++||.+|++.|++|+|||++ .+||+|.+.||+|++.++........+.. ...+++...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-------~~GG~c~~~gc~P~k~l~~~a~~~~~~~~-~~~~g~~~~- 72 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-------RLGGTCVNVGCVPKKIMFNAASVHDILEN-SRHYGFDTK- 72 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------STTHHHHHTSHHHHHHHHHHHHHHHHHHH-GGGGTCCCC-
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-------CcCccccccCCcchHHHHHHHHHHHHHHh-hHhcCCccC-
Confidence 389999999999999999999999999999995 58999999999999998877766655543 555676644
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEc-----------CCceEEEecEEEE
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIIN-----------KTKETITAKYIII 538 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~-----------~~g~~i~~d~lVi 538 (866)
..++|..+..+.+.....+...+...+++.+++++.++...++. +.+.+.. .++..+.||+|||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~-----~~v~v~~~~~~~~~~~~~~~~~~~~~d~lVi 147 (500)
T 1onf_A 73 FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE-----NRILIKGTKDNNNKDNGPLNEEILEGRNILI 147 (500)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC-------------------------------CBSSEEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC-----CEEEEEeccccccccccCCCceEEEeCEEEE
Confidence 56789999988888888888888888889999999987665543 5555532 1246799999999
Q ss_pred ecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHH
Q psy9583 539 ATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF 618 (866)
Q Consensus 539 ATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~ 618 (866)
|||+.|..|+.++. ..+++++++..+.. +++++|||||++|+|+|..|+++|.+|+++++.+++++.+|+++.+.+.
T Consensus 148 AtGs~p~~p~i~G~--~~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~ 224 (500)
T 1onf_A 148 AVGNKPVFPPVKGI--ENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLE 224 (500)
T ss_dssp CCCCCBCCCSCTTG--GGCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHH
T ss_pred CCCCCCCCCCCCCC--CcccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHH
Confidence 99999987655443 24678888877766 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEE-EeccEEEEeeccccCCCCCCccccCeeecCCCcEE
Q psy9583 619 HLLNKQGLNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIIT-SIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFII 696 (866)
Q Consensus 619 ~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~-~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 696 (866)
+.|++.||++++++.|++++.+++ .+.+.+. +|. + +++|.|++|+|++|+++.|.++++|+++ ++|+|.
T Consensus 225 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~--~g~------~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~ 295 (500)
T 1onf_A 225 NDMKKNNINIVTFADVVEIKKVSDKNLSIHLS--DGR------IYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIV 295 (500)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSTTCEEEEET--TSC------EEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEE
T ss_pred HHHHhCCCEEEECCEEEEEEEcCCceEEEEEC--CCc------EEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEE
Confidence 999999999999999999987643 3555554 665 4 8999999999999999866568889999 689999
Q ss_pred eCCCCCCCCCCEEEecccC----------------------------------CCCCcHHHHHHHHHHHHHHHhCCC-CC
Q psy9583 697 VNDNCETNIPNIYAIGDVV----------------------------------RGPMLAHKAEEEGIMVAEHISGQK-HS 741 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a----------------------------------~~~~~~~~A~~~g~~aa~~i~g~~-~~ 741 (866)
||+++||++|+|||+|||+ +.+++++.|.+||++||+||++.. ..
T Consensus 296 vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~ 375 (500)
T 1onf_A 296 VDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRK 375 (500)
T ss_dssp ECTTCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCC
T ss_pred ECCCcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999 567899999999999999999854 44
Q ss_pred CCCCCccEEEEccCceeeeecCHHHHHhc-C-CcEEEEEEecCCchhhh----hcCCceEEEEEEEECCCCcEEEEEEEC
Q psy9583 742 INFNALPFVIYTFPEIASVGKTEQYLKKH-N-ISYNVGIFPFLANSRAR----ILGETSGMVKILSDMKSDEILGIHIIG 815 (866)
Q Consensus 742 ~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~-~~~~~~~~~~~~~~~~~----~~~~~~g~~kli~~~~~~~ilG~~~~g 815 (866)
+++..+|+++|++|+++++|++|++|++. | .++.+...++....++. ..+++.+|+|+++|+++++|||+|++|
T Consensus 376 ~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g 455 (500)
T 1onf_A 376 TNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIG 455 (500)
T ss_dssp CCCSSCCEEECCSSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEES
T ss_pred CCCCCCCeEEEcCcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEEC
Confidence 67788999999999999999999999987 4 68888888888888877 455678999999999999999999999
Q ss_pred CChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHHHH
Q psy9583 816 PMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKEAA 856 (866)
Q Consensus 816 ~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 856 (866)
+++.|+|+.+++||++++|++||.+++++|||++|.+.+++
T Consensus 456 ~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 456 LNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp TTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 99999999999999999999999999999999999998664
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.1e-62 Score=572.84 Aligned_cols=446 Identities=20% Similarity=0.325 Sum_probs=376.8
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|..++||+|||||+||++||.+|++.|++|+|||++ ..+||+|.+.||+|++.++.....+..+.. ...+++
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~------~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~~g~- 111 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRW------PFLGGSCPHNACVPHHLFSDCAAELMLART-FSGQYW- 111 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS------SSSSCHHHHHSHHHHHHHHHHHHHHHHHHH-TTTSTT-
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC------CCCCCcccccCcCchHHHHHHHHHHHHHhh-hhhcCc-
Confidence 444699999999999999999999999999999997 559999999999999998877776655543 344443
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHH---HHH-----HhCCcEEE-EeEEEEeccccCcccEEEEEcCCceEEEecEEE
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGIL---FLF-----KKNKIKFF-HGHAIFTGKIQNNFHEIQIINKTKETITAKYII 537 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~gV~v~-~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lV 537 (866)
.......+ ...+.....+...+. .++ ++.+++++ .+.+..++. +.+.+ . +..+.||+||
T Consensus 112 ~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~-----~~v~~--~-g~~~~~d~lV 179 (523)
T 1mo9_A 112 FPDMTEKV----VGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN-----HTVEA--A-GKVFKAKNLI 179 (523)
T ss_dssp CCCCTTCC----CCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET-----TEEEE--T-TEEEEBSCEE
T ss_pred HHHHHhhh----hhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC-----CEEEE--C-CEEEEeCEEE
Confidence 11110000 001222222222223 455 77899998 777666655 66666 2 5789999999
Q ss_pred EecCCCCcCCCCCcCCCceEecchhhh-ccccCC-CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHH
Q psy9583 538 IATGSKARSFPGVKFDENLILSNKGAL-EMINVP-KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAK 615 (866)
Q Consensus 538 iATGs~p~~~p~~~~~~~~~~t~~~~~-~~~~~~-~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~ 615 (866)
+|||+.|..|+..+.....+++++++. .+...+ ++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+
T Consensus 180 iATGs~p~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~ 259 (523)
T 1mo9_A 180 LAVGAGPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRA 259 (523)
T ss_dssp ECCCEECCCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHH
T ss_pred ECCCCCCCCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHH
Confidence 999999987765555555578888888 777777 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCe----EEEEEeeCCCCccceeEEEeccEEEEeeccccCCC-CCCccccCeeec
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKEN----VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN-NLNIDKIGLKVN 690 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~----~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~-~l~l~~~gl~~~ 690 (866)
.+.+.|++.||++++++.|++++.++++ +.+.+. +|. .++++|.||+|+|++|+++ + ++.+|++++
T Consensus 260 ~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~--~G~-----~~i~aD~Vv~A~G~~p~~~~~--l~~~gl~~~ 330 (523)
T 1mo9_A 260 YVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTP--NGE-----MRIETDFVFLGLGEQPRSAEL--AKILGLDLG 330 (523)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEET--TEE-----EEEECSCEEECCCCEECCHHH--HHHHTCCBC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEEC--CCc-----EEEEcCEEEECcCCccCCccC--HHHcCCccC
Confidence 9999999999999999999999875444 445443 441 2789999999999999997 4 688899998
Q ss_pred CCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEccCceeeeecCHHHHHhc
Q psy9583 691 ENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTFPEIASVGKTEQYLKKH 770 (866)
Q Consensus 691 ~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~ 770 (866)
++|+|.||++|||++|+|||+|||++.+++++.|..||++||+||++...++++..+|+++|++|+++++|++|++|++.
T Consensus 331 ~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~ 410 (523)
T 1mo9_A 331 PKGEVLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAA 410 (523)
T ss_dssp TTSCBCCCTTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSEEEEEECCHHHHHHT
T ss_pred CCCCEEECCCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhC
Confidence 89999999999999999999999999889999999999999999999776777888999999999999999999999999
Q ss_pred CCcEEEEEEecCC--------------chhhhhc--CCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCC
Q psy9583 771 NISYNVGIFPFLA--------------NSRARIL--GETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRAS 834 (866)
Q Consensus 771 ~~~~~~~~~~~~~--------------~~~~~~~--~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~ 834 (866)
|+++.+..+++.. ..++.+. +++.||+|+++|+++++|||+|++|+.+.|+|+.+++||++++|
T Consensus 411 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t 490 (523)
T 1mo9_A 411 GHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLT 490 (523)
T ss_dssp TCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCB
T ss_pred CCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCC
Confidence 9999999999887 7788887 77889999999999999999999999999999999999999999
Q ss_pred HHHHccc--cccCCChhHHHHHHHHHhhh
Q psy9583 835 SEDIARI--CHVHPSLSEAMKEAAMSIEN 861 (866)
Q Consensus 835 ~~~l~~~--~~~~Pt~~e~~~~~~~~~~~ 861 (866)
++||.++ +|+|||++|.+.+++....+
T Consensus 491 ~~~l~~~~~~~~~Pt~~e~~~~~~~~~~~ 519 (523)
T 1mo9_A 491 VDELGDMDELFLNPTHFIQLSRLRAGSKN 519 (523)
T ss_dssp HHHHHTSCCCSSCSCCHHHHHHHHTTCSS
T ss_pred HHHHHhCCcceECCCHHHHHHHHHHhhHh
Confidence 9999999 99999999999988866544
No 32
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=4.7e-59 Score=552.36 Aligned_cols=457 Identities=25% Similarity=0.402 Sum_probs=383.1
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc-CCCc-ccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW-KDNE-ENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~-~~~~-~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
.+|||+||||||||++||.+|++.|++|+|||+. +.+. ..+.+||+|.+.||+|++.+............ ...+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~-~~~~g~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALED-AEHFGWS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHH-HHHTTCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhh-HHhCCcc
Confidence 3599999999999999999999999999999973 2111 12358999999999999988877665554443 5566665
Q ss_pred ccc--cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCC
Q psy9583 467 TQN--VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGS 542 (866)
Q Consensus 467 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs 542 (866)
... ...+|..+..+.+..++.+...+...+++.+|+++.+...+++. +.+.+.+.+| .++.||+||||||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~-----~~v~v~~~~g~~~~~~~d~lviAtGs 259 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISP-----HEVQITDKNQKVSTITGNKIILATGE 259 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET-----TEEEEECTTCCEEEEEEEEEEECCCE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCC-----CEEEEEeCCCCeEEEEeCEEEEeCCC
Confidence 432 46789999988888888877777777888999999988887766 7777776555 57999999999999
Q ss_pred CCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHH
Q psy9583 543 KARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN 622 (866)
Q Consensus 543 ~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~ 622 (866)
.|+.|+.++.. ...+++++++.+...+++++|||||++|+|+|..|+++|.+|+++++. .+++.+++++.+.+.+.|+
T Consensus 260 ~p~~p~i~G~~-~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~ 337 (598)
T 2x8g_A 260 RPKYPEIPGAV-EYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRGFDQQMAEKVGDYME 337 (598)
T ss_dssp EECCCSSTTHH-HHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCcc-cceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCcCCHHHHHHHHHHHH
Confidence 99877654422 235677777777777899999999999999999999999999999998 7788899999999999999
Q ss_pred HcCCEEEeCceEEEEEEc------C---CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCC
Q psy9583 623 KQGLNIILNTKIHDIKIN------K---ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENN 693 (866)
Q Consensus 623 ~~GV~i~~~~~v~~i~~~------~---~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G 693 (866)
+.||++++++.+.++... + +.+.+.+...+|. ...+++|.|++|+|++||++++.++.+|++++++|
T Consensus 338 ~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~----~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G 413 (598)
T 2x8g_A 338 NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGK----KFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNG 413 (598)
T ss_dssp HTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSC----EEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTS
T ss_pred hCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCc----EEeccCCEEEEEeCCccccCccCchhcCceECCCC
Confidence 999999999988888642 2 3455554434554 23456999999999999998876788899999899
Q ss_pred cEEeCCCCCCCCCCEEEecccC-CCCCcHHHHHHHHHHHHHHHhCCC-CCCCCCCccEEEEccCceeeeecCHHHHHhc-
Q psy9583 694 FIIVNDNCETNIPNIYAIGDVV-RGPMLAHKAEEEGIMVAEHISGQK-HSINFNALPFVIYTFPEIASVGKTEQYLKKH- 770 (866)
Q Consensus 694 ~i~Vd~~l~Ts~~~VyA~GD~a-~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~- 770 (866)
+|.||+++||++|+|||+|||+ +.+.+++.|.+||++||+||++.. ...++..+|+++|++|+++++|++|++|++.
T Consensus 414 ~i~vd~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~ 493 (598)
T 2x8g_A 414 RVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKY 493 (598)
T ss_dssp CBCCCTTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHH
T ss_pred cEEeCCCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHHHHhhC
Confidence 9999999999999999999995 457899999999999999999754 4456788999999999999999999999876
Q ss_pred C-CcEEEEEEecCCchhhhhcCC-ceEEEEEEEEC-CCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCC
Q psy9583 771 N-ISYNVGIFPFLANSRARILGE-TSGMVKILSDM-KSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPS 847 (866)
Q Consensus 771 ~-~~~~~~~~~~~~~~~~~~~~~-~~g~~kli~~~-~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt 847 (866)
+ .++.+...++....++...++ ..+|+|+++++ ++++|||+|++|+++.|+|+.+++||++++|++||++++++|||
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt 573 (598)
T 2x8g_A 494 GDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPT 573 (598)
T ss_dssp CGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSC
T ss_pred CCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCC
Confidence 4 358888888887777766543 68999999995 68999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHH
Q psy9583 848 LSEAMKEAAM 857 (866)
Q Consensus 848 ~~e~~~~~~~ 857 (866)
++|++.++++
T Consensus 574 ~~e~~~~~~~ 583 (598)
T 2x8g_A 574 CSETFTTLHV 583 (598)
T ss_dssp SGGGGGSCCC
T ss_pred HHHHHHHHHH
Confidence 9999987764
No 33
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.4e-56 Score=509.28 Aligned_cols=406 Identities=21% Similarity=0.298 Sum_probs=316.0
Q ss_pred ceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccC-CCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFAL-GGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~-GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+|||||||+||++||.+|++.| .+|+|||+++ .. ++.| |+|+.. .. .....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~------~~~~~~~----~l~~~~---------------~~-~~~~~ 55 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR------DMSFANC----ALPYVI---------------GE-VVEDR 55 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS------CSSBCGG----GHHHHH---------------TT-SSCCG
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC------CCCCCcc----hhHHHH---------------cC-Cccch
Confidence 6999999999999999999988 5699999973 22 2222 333110 00 00000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc---CCceEEEecEEEEecCCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN---KTKETITAKYIIIATGSKA 544 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~---~~g~~i~~d~lViATGs~p 544 (866)
...+ ....+.++++.+++++.+..+. ++. ..+.+.+.. .++..+.||+||||||++|
T Consensus 56 ~~~~----------------~~~~~~~~~~~~i~~~~~~~V~~id~---~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 56 RYAL----------------AYTPEKFYDRKQITVKTYHEVIAIND---ERQTVSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp GGTB----------------CCCHHHHHHHHCCEEEETEEEEEEET---TTTEEEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred hhhh----------------hcCHHHHHHhcCCEEEeCCeEEEEEc---cCcEEEEEeccCCceEEEEcCEEEECCCCcc
Confidence 0000 0011334566799998887665 443 445666543 2236789999999999999
Q ss_pred cCCCCCcCCCceEecchhhhccc-----cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHH
Q psy9583 545 RSFPGVKFDENLILSNKGALEMI-----NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFH 619 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~~~~~~~~-----~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~ 619 (866)
+.|+..+.....+.+..++..+. ..+++++|||||++|+|+|..++++|.+|+++++.+++++.+|+++.+.+.+
T Consensus 117 ~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~ 196 (437)
T 4eqs_A 117 NSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILD 196 (437)
T ss_dssp CCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHH
T ss_pred ccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHH
Confidence 87654432111122334443332 2478999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
.|+++||++++++.|++++.+ . +.+. +|+ ++++|.|++|+|++||+++ ++..|++++++|+|.||+
T Consensus 197 ~l~~~gV~i~~~~~v~~~~~~--~--v~~~--~g~------~~~~D~vl~a~G~~Pn~~~--~~~~gl~~~~~G~I~vd~ 262 (437)
T 4eqs_A 197 ELDKREIPYRLNEEINAINGN--E--ITFK--SGK------VEHYDMIIEGVGTHPNSKF--IESSNIKLDRKGFIPVND 262 (437)
T ss_dssp HHHHTTCCEEESCCEEEEETT--E--EEET--TSC------EEECSEEEECCCEEESCGG--GTTSSCCCCTTSCEECCT
T ss_pred HhhccceEEEeccEEEEecCC--e--eeec--CCe------EEeeeeEEEEeceecCcHH--HHhhhhhhccCCcEecCC
Confidence 999999999999999988643 2 4443 666 8999999999999999987 688899999999999999
Q ss_pred CCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHHHHHHhCCCC-C-CCCCCccEEEEccCceeeeecCHHHH
Q psy9583 700 NCETNIPNIYAIGDVVRG----------PMLAHKAEEEGIMVAEHISGQKH-S-INFNALPFVIYTFPEIASVGKTEQYL 767 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~g~~~-~-~~~~~~p~~~~~~~~~a~vGl~e~~a 767 (866)
+|||++|||||+|||++. +++++.|.+||+++|+||+|... . .++...|.+.|++|+++++|+||+||
T Consensus 263 ~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a 342 (437)
T 4eqs_A 263 KFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNEL 342 (437)
T ss_dssp TCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGG
T ss_pred CccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHH
Confidence 999999999999999863 35799999999999999998754 2 24566788999999999999999999
Q ss_pred HhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHcccccc-C
Q psy9583 768 KKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPM-ASELIAEAVIAIEFRASSEDIARICHV-H 845 (866)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~-a~eli~~~~~~i~~~~~~~~l~~~~~~-~ 845 (866)
++.++++ ..+++....+. +.+++.||+|+++|+++++|||+|++|++ |.|+|+.+++||++++|++||+++.++ |
T Consensus 343 ~~~~~~~--~~~~~~~~~~~-~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yh 419 (437)
T 4eqs_A 343 KQFDYKM--VEVTQGAHANY-YPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFA 419 (437)
T ss_dssp GGSCEEE--EEEEEESSCTT-SSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCC
T ss_pred HhCCceE--EEEecCCchhh-cCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccC
Confidence 9877554 44444443332 34678999999999999999999999985 899999999999999999999999665 8
Q ss_pred CChhHH---HHHHHHHh
Q psy9583 846 PSLSEA---MKEAAMSI 859 (866)
Q Consensus 846 Pt~~e~---~~~~~~~~ 859 (866)
|+++++ ++.+++++
T Consensus 420 P~~s~~~d~v~~aa~~A 436 (437)
T 4eqs_A 420 PPYSHPKDLINMIGYKA 436 (437)
T ss_dssp TTTCCSSCHHHHHHHTT
T ss_pred CCCCchHHHHHHHHHhc
Confidence 999976 55666554
No 34
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=3.6e-55 Score=501.50 Aligned_cols=412 Identities=20% Similarity=0.243 Sum_probs=328.6
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+||+|||||+||++||.+|++. |.+|+|||++ +.+| +.|.............
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~------~~~g-------~~~~~~~~~~~~~~~~------------- 56 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQ------ATVG-------YLSGGLSAYFNHTINE------------- 56 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS------SCCS-------SCCC-------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC------CCCc-------ccCccchhhhcCCCCC-------------
Confidence 6899999999999999999998 8999999997 3333 1221111100000000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEE-cCCceEEEecEEEEecCCCCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQII-NKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~-~~~g~~i~~d~lViATGs~p~~ 546 (866)
+ ..+......++++.+++++.+..+. ++. ..+.+.+. ..++..+.||+||||||+.|..
T Consensus 57 -----~-----------~~~~~~~~~~~~~~gi~~~~~~~V~~id~---~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~ 117 (452)
T 3oc4_A 57 -----L-----------HEARYITEEELRRQKIQLLLNREVVAMDV---ENQLIAWTRKEEQQWYSYDKLILATGASQFS 117 (452)
T ss_dssp --------------------CCCCHHHHHHTTEEEECSCEEEEEET---TTTEEEEEETTEEEEEECSEEEECCCCCBCC
T ss_pred -----H-----------HHhhcCCHHHHHHCCCEEEECCEEEEEEC---CCCEEEEEecCceEEEEcCEEEECCCcccCC
Confidence 0 0000112234567899998766655 433 44666664 2345789999999999999998
Q ss_pred CCCCcCCCceEecchhh------hccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-ccHHHHHHHHH
Q psy9583 547 FPGVKFDENLILSNKGA------LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKKAFH 619 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~------~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-~d~~~~~~l~~ 619 (866)
|+.++.+...+++..++ ......+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +|+++.+.+.+
T Consensus 118 p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~ 197 (452)
T 3oc4_A 118 TQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQK 197 (452)
T ss_dssp CCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHH
T ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHH
Confidence 77666555566665433 223346899999999999999999999999999999999999985 89999999999
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
.|++.||++++++.|++++..++++.+.+. ++ ++++|.|++|+|++|+++++ +.. ++++++|+|.||+
T Consensus 198 ~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~--~g-------~i~aD~Vv~A~G~~p~~~~l--~~~-~~~~~~g~i~vd~ 265 (452)
T 3oc4_A 198 SLEKQAVIFHFEETVLGIEETANGIVLETS--EQ-------EISCDSGIFALNLHPQLAYL--DKK-IQRNLDQTIAVDA 265 (452)
T ss_dssp HHHTTTEEEEETCCEEEEEECSSCEEEEES--SC-------EEEESEEEECSCCBCCCSSC--CTT-SCBCTTSCBCCCT
T ss_pred HHHHcCCEEEeCCEEEEEEccCCeEEEEEC--CC-------EEEeCEEEECcCCCCChHHH--Hhh-hccCCCCCEEECc
Confidence 999999999999999999976666655442 32 68999999999999999874 443 8888899999999
Q ss_pred CCCCCCCCEEEecccCCCC----------CcHHHHHHHHHHHHHHHhCCCCCC--CCCCccEEEEccCceeeeecCHHHH
Q psy9583 700 NCETNIPNIYAIGDVVRGP----------MLAHKAEEEGIMVAEHISGQKHSI--NFNALPFVIYTFPEIASVGKTEQYL 767 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~~----------~~~~~A~~~g~~aa~~i~g~~~~~--~~~~~p~~~~~~~~~a~vGl~e~~a 767 (866)
+|||++|+|||+|||++.+ ++++.|..||++||+||++....+ .+..+|+.+| +++++++|+||+||
T Consensus 266 ~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~-~~~~a~vG~te~~a 344 (452)
T 3oc4_A 266 YLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVG-DYYLASTGLTETEG 344 (452)
T ss_dssp TCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEET-TEEEEEEECCSGGG
T ss_pred CccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEc-CeeEEEecCCHHHH
Confidence 9999999999999999753 689999999999999999876544 3566777777 57999999999999
Q ss_pred HhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECC-ChHHHHHHHHHHHHCCCCHHHHccc-cccC
Q psy9583 768 KKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGP-MASELIAEAVIAIEFRASSEDIARI-CHVH 845 (866)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~-~a~eli~~~~~~i~~~~~~~~l~~~-~~~~ 845 (866)
++.|+++.+..+++.. ++ +.+++.||+|+++|+++++|||+|++|+ +|.|+|+.+++||++++|++||+++ +++|
T Consensus 345 ~~~g~~~~~~~~~~~~--~~-~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~ 421 (452)
T 3oc4_A 345 LFFPQTLASIIVRQPA--PP-LQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQ 421 (452)
T ss_dssp GGSSSCEEEEEEEEEC--TT-TTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCC
T ss_pred HHCCCceEEEEEecCC--cc-CCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccC
Confidence 9999999998877644 33 4466789999999999999999999999 7999999999999999999999999 7899
Q ss_pred CChhH---HHHHHHHHhhhhc
Q psy9583 846 PSLSE---AMKEAAMSIENRS 863 (866)
Q Consensus 846 Pt~~e---~~~~~~~~~~~~~ 863 (866)
||++| .++.|++.++.+.
T Consensus 422 P~~~~~~~~~~~a~~~~~~~~ 442 (452)
T 3oc4_A 422 PSLTNIYDITNLMGASAYWRE 442 (452)
T ss_dssp TTTSCSSCHHHHHHHHHHHHT
T ss_pred CCCCCchhHHHHHHHHHHHhh
Confidence 99999 4678887776543
No 35
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.2e-53 Score=491.86 Aligned_cols=422 Identities=21% Similarity=0.238 Sum_probs=307.4
Q ss_pred ccceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceecc-ccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGC-IPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~-~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
++||+|||||+||++||..|++. |++|+|||+++ .++. ..| +|... ... +.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~------~~~~----~~~gl~~~~----~g~------------~~ 56 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS------RISY----GGCGIPYYV----SGE------------VS 56 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC------cccc----cccccchhh----cCC------------CC
Confidence 37999999999999999999998 89999999973 2210 000 11100 000 00
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCc--eEEEecEEEEecCC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTK--ETITAKYIIIATGS 542 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g--~~i~~d~lViATGs 542 (866)
+...+.... ..+......+.++.+++++.+..+. ++. ..+.+.+.. .++ ..+.||+||+|||+
T Consensus 57 ------~~~~~~~~~----~~~~~~~~~~~~~~gi~~~~~~~V~~id~---~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 57 ------NIESLQATP----YNVVRDPEFFRINKDVEALVETRAHAIDR---AAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ----------------------------------CEEECSEEEEEEET---TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------chHHhcccc----chhccCHHHHhhhcCcEEEECCEEEEEEC---CCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 000000000 0001112233345789988776665 433 556777764 223 48999999999999
Q ss_pred CCcCCCCCcCCCceEe---cchhhhccc-----cCCCeEEEECCcHHHHHHHHHHHhc-CCcEEEEecCCcCCC-cccHH
Q psy9583 543 KARSFPGVKFDENLIL---SNKGALEMI-----NVPKKLCIIGAGVIGLEIGSIWRRL-GSEVTILEMSSNFLN-TVDEE 612 (866)
Q Consensus 543 ~p~~~p~~~~~~~~~~---t~~~~~~~~-----~~~~~vvVIGgG~~glE~A~~l~~~-g~~Vtli~~~~~~l~-~~d~~ 612 (866)
.|..|+.++.+...++ +..+...+. ..+++++|||+|++|+|+|..|.++ |.+|+++++.+++++ .++++
T Consensus 124 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~ 203 (472)
T 3iwa_A 124 KANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKS 203 (472)
T ss_dssp EECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHH
T ss_pred CcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHH
Confidence 9887665544333333 333444333 3579999999999999999999999 999999999999998 89999
Q ss_pred HHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCC
Q psy9583 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNEN 692 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 692 (866)
+.+.+.+.+++.||++++++.|++++.+++.+.+.+. +|+ ++++|.||+|+|++|++++ ++.+|++++++
T Consensus 204 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~--~g~------~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~~~ 273 (472)
T 3iwa_A 204 LSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVIT--DKR------TLDADLVILAAGVSPNTQL--ARDAGLELDPR 273 (472)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE--SSC------EEECSEEEECSCEEECCHH--HHHHTCCBCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEe--CCC------EEEcCEEEECCCCCcCHHH--HHhCCccCCCC
Confidence 9999999999999999999999999986667666664 565 8999999999999999986 57789999989
Q ss_pred CcEEeCCCCCCCCCCEEEecccC-------CC---CCcHHHHHHHHHHHHHHHhCCCCCCCC-CCccEEEEccCceeeee
Q psy9583 693 NFIIVNDNCETNIPNIYAIGDVV-------RG---PMLAHKAEEEGIMVAEHISGQKHSINF-NALPFVIYTFPEIASVG 761 (866)
Q Consensus 693 G~i~Vd~~l~Ts~~~VyA~GD~a-------~~---~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~p~~~~~~~~~a~vG 761 (866)
|+|.||+++||++|+|||+|||+ +. +++++.|.+||++||+||+|....+.. ...+++.|++|+++++|
T Consensus 274 g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG 353 (472)
T 3iwa_A 274 GAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAG 353 (472)
T ss_dssp CCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEE
T ss_pred CCEEECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEE
Confidence 99999999999999999999998 32 358999999999999999997755422 22334568899999999
Q ss_pred cCHHHHHhcCCcEEEEEEecCCchhhhhc-CCceEEEEEEEECCCCcEEEEEEECC---ChHHHHHHHHHHHHCCCCHHH
Q psy9583 762 KTEQYLKKHNISYNVGIFPFLANSRARIL-GETSGMVKILSDMKSDEILGIHIIGP---MASELIAEAVIAIEFRASSED 837 (866)
Q Consensus 762 l~e~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~kli~~~~~~~ilG~~~~g~---~a~eli~~~~~~i~~~~~~~~ 837 (866)
++|+||++.|+++.+..+. ...++.++ +++.||+|+++|+++++|||+|++|+ .+.|+|+.+++||++++|++|
T Consensus 354 ~~e~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~ 431 (472)
T 3iwa_A 354 LTVEGALREGYDAVNVHVE--QFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVED 431 (472)
T ss_dssp CCHHHHHHTTCCEEEEEEE--C-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHH
T ss_pred CCHHHHHHcCCceEEEEEe--cCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHH
Confidence 9999999999999887664 55677766 77899999999999999999999999 458999999999999999999
Q ss_pred HccccccC-CChhHHH---HHHHHHhhhh
Q psy9583 838 IARICHVH-PSLSEAM---KEAAMSIENR 862 (866)
Q Consensus 838 l~~~~~~~-Pt~~e~~---~~~~~~~~~~ 862 (866)
|++++++| ||++|++ +.+++.+.+.
T Consensus 432 l~~~~~~~~P~~~~~~~~~~~~~~~~~~~ 460 (472)
T 3iwa_A 432 ISNAEVVYSPPFASAMDIVNVAGNVADNV 460 (472)
T ss_dssp HHTCCCC--------CCHHHHHHHHHHHH
T ss_pred HhcccccCCCCCCCcccHHHHHHHHHHHh
Confidence 99999998 9999985 4666666543
No 36
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-53 Score=488.65 Aligned_cols=410 Identities=19% Similarity=0.261 Sum_probs=322.3
Q ss_pred ccceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
++||+|||||+||++||..|++. |++|+|||++ +.+++.. .++|... . +.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~------~~~~~~~---~~~p~~~---------------~--~~-- 54 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEAT------EWVSHAP---CGIPYVV---------------E--GL-- 54 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS------SCCC-----------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECC------CccccCC---cCCcccc---------------C--CC--
Confidence 48999999999999999999998 7899999997 3332110 0111100 0 00
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc-eEEEecEEEEecCCCCc
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKAR 545 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~ 545 (866)
.+...+..+ ....+.++.+++++.++.+. ++. ....+...++ ..+.||+||+|||+.|+
T Consensus 55 ----~~~~~~~~~----------~~~~~~~~~gi~v~~~~~v~~i~~-----~~~~v~~~~g~~~~~~d~lviAtG~~p~ 115 (449)
T 3kd9_A 55 ----STPDKLMYY----------PPEVFIKKRGIDLHLNAEVIEVDT-----GYVRVRENGGEKSYEWDYLVFANGASPQ 115 (449)
T ss_dssp -------------------------CTHHHHTTCEEETTCEEEEECS-----SEEEEECSSSEEEEECSEEEECCCEEEC
T ss_pred ----CCHHHhhhc----------CHHHHHHhcCcEEEecCEEEEEec-----CCCEEEECCceEEEEcCEEEECCCCCCC
Confidence 000011100 01123367899999985444 554 4455655666 58999999999999998
Q ss_pred CCCCCcCCCceEec---chhhhcccc-----CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-ccHHHHHH
Q psy9583 546 SFPGVKFDENLILS---NKGALEMIN-----VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKK 616 (866)
Q Consensus 546 ~~p~~~~~~~~~~t---~~~~~~~~~-----~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-~d~~~~~~ 616 (866)
.|+.++.+...+++ ..+...+.. .+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +++++.+.
T Consensus 116 ~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~ 195 (449)
T 3kd9_A 116 VPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDI 195 (449)
T ss_dssp CCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHH
T ss_pred CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHH
Confidence 77655544444443 334433322 5689999999999999999999999999999999999987 99999999
Q ss_pred HHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEE
Q psy9583 617 AFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFII 696 (866)
Q Consensus 617 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 696 (866)
+.+.|++. |++++++.+.+++.++ .+..... ++. ++++|.|++|+|++|++++ ++.+|++++++|+|.
T Consensus 196 l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~--~g~------~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~~~G~i~ 263 (449)
T 3kd9_A 196 LEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVT--DAG------EYKAELVILATGIKPNIEL--AKQLGVRIGETGAIW 263 (449)
T ss_dssp HHHHHTTT-SEEEESCCEEEEECSS-SCCEEEE--TTE------EEECSEEEECSCEEECCHH--HHHTTCCBCTTSSBC
T ss_pred HHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEe--CCC------EEECCEEEEeeCCccCHHH--HHhCCccCCCCCCEE
Confidence 99999999 9999999999998654 3322232 444 7999999999999999987 688899999999999
Q ss_pred eCCCCCCCCCCEEEecccCC-------C---CCcHHHHHHHHHHHHHHHhCCCCCCCC-CCccEEEEccCceeeeecCHH
Q psy9583 697 VNDNCETNIPNIYAIGDVVR-------G---PMLAHKAEEEGIMVAEHISGQKHSINF-NALPFVIYTFPEIASVGKTEQ 765 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a~-------~---~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~p~~~~~~~~~a~vGl~e~ 765 (866)
||+++||++|+|||+|||+. . +++++.|..||++||+||+|....++. ...|++.|++|+++++|++|+
T Consensus 264 vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~ 343 (449)
T 3kd9_A 264 TNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEM 343 (449)
T ss_dssp CCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHH
T ss_pred ECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHH
Confidence 99999999999999999984 2 579999999999999999998765533 456889999999999999999
Q ss_pred HHHhcCCcEEEEEEecCCchhhhhc-CCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccc-cc
Q psy9583 766 YLKKHNISYNVGIFPFLANSRARIL-GETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARI-CH 843 (866)
Q Consensus 766 ~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~-~~ 843 (866)
||++.|+++.+..++ ...++.+. +++.||+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.++ ++
T Consensus 344 ~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~ 421 (449)
T 3kd9_A 344 EALKEGYDVRTAFIK--ASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLA 421 (449)
T ss_dssp HHHHTTCCEEEEEEE--EESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCC
T ss_pred HHHHCCCceEEEEEe--cCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccc
Confidence 999999999887765 44555555 667899999999999999999999999999999999999999999999998 56
Q ss_pred cCCChhHHH---HHHHHHhh
Q psy9583 844 VHPSLSEAM---KEAAMSIE 860 (866)
Q Consensus 844 ~~Pt~~e~~---~~~~~~~~ 860 (866)
+||++++++ +.|++.+.
T Consensus 422 ~~p~~~~~~~~~~~~~~~~~ 441 (449)
T 3kd9_A 422 YAPPFAPVWDPLIVLARVLK 441 (449)
T ss_dssp CBTTTBCSSCHHHHHHHHHH
T ss_pred cCCCCCCchhHHHHHHHHHh
Confidence 799999874 45665554
No 37
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.7e-52 Score=479.60 Aligned_cols=416 Identities=17% Similarity=0.201 Sum_probs=326.3
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+||+|||||+||++||.+|++. |.+|+|||+++ .++. .+| ... ..... .+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~------~~~~----~~~---~~~-------~~~~g-----~~~-- 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND------NISF----LSC---GIA-------LYLGK-----EIK-- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS------CCCB----CGG---GHH-------HHHTT-----CBG--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC------CCCc----ccc---cch-------hhhcC-----Ccc--
Confidence 5899999999999999999998 99999999972 2221 111 000 00000 000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-C--CceEEEecEEEEecCCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-K--TKETITAKYIIIATGSKA 544 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~--~g~~i~~d~lViATGs~p 544 (866)
..++.. +...+..++++.+++++.+..+. ++. ..+.+.+.+ . .+.++.||+||+|||++|
T Consensus 54 --~~~~~~-----------~~~~~~~~~~~~gv~~~~~~~v~~i~~---~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 54 --NNDPRG-----------LFYSSPEELSNLGANVQMRHQVTNVDP---ETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp --GGCGGG-----------GBSCCHHHHHHTTCEEEESEEEEEEEG---GGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred --cCCHHH-----------hhhcCHHHHHHcCCEEEeCCEEEEEEc---CCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 001111 01112334567899998887655 443 346777754 1 146799999999999999
Q ss_pred cCCCCCcCCCceEecc------hhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHH
Q psy9583 545 RSFPGVKFDENLILSN------KGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKA 617 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~------~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l 617 (866)
+.|+.++.+...+++. .++......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+
T Consensus 118 ~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l 197 (452)
T 2cdu_A 118 TVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDIL 197 (452)
T ss_dssp CCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHH
T ss_pred CCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHH
Confidence 8776555443445533 23333445689999999999999999999999999999999999998 7999999999
Q ss_pred HHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEe
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIV 697 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~V 697 (866)
.+.|++.||+++++++|++++.+++.+..... +|. ++++|.|++|+|++|++++ ++.. ++++++|+|.|
T Consensus 198 ~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~--~g~------~i~~D~vv~a~G~~p~~~l--l~~~-l~~~~~G~i~V 266 (452)
T 2cdu_A 198 AKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL--DGK------EIKSDIAILCIGFRPNTEL--LKGK-VAMLDNGAIIT 266 (452)
T ss_dssp HHHHHHTTCEEEESSCEEEEEEETTEEEEEET--TSC------EEEESEEEECCCEEECCGG--GTTT-SCBCTTSCBCC
T ss_pred HHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe--CCC------EEECCEEEECcCCCCCHHH--HHHh-hhcCCCCCEEE
Confidence 99999999999999999999875555432222 554 7999999999999999986 5666 88888899999
Q ss_pred CCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHHHHHHhCCCCCC-CCCCccEEEEccCceeeeecCHHH
Q psy9583 698 NDNCETNIPNIYAIGDVVRG----------PMLAHKAEEEGIMVAEHISGQKHSI-NFNALPFVIYTFPEIASVGKTEQY 766 (866)
Q Consensus 698 d~~l~Ts~~~VyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~~~~~~a~vGl~e~~ 766 (866)
|++|||++|+|||+|||++. +++++.|.+||++||+||++....+ .+...++..+++|+++++|+++++
T Consensus 267 d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 346 (452)
T 2cdu_A 267 DEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTAL 346 (452)
T ss_dssp CTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHH
T ss_pred CCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHH
Confidence 99999999999999999973 4689999999999999999875433 234566788889999999999999
Q ss_pred HHhcCCcEEEEEEecCCchhhhhc-CCceEEEEEEEECCCCcEEEEEEECC-ChHHHHHHHHHHHHCCCCHHHHccc-cc
Q psy9583 767 LKKHNISYNVGIFPFLANSRARIL-GETSGMVKILSDMKSDEILGIHIIGP-MASELIAEAVIAIEFRASSEDIARI-CH 843 (866)
Q Consensus 767 a~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~kli~~~~~~~ilG~~~~g~-~a~eli~~~~~~i~~~~~~~~l~~~-~~ 843 (866)
|++.|+++.+.. +....++.++ +...+|+|+++++++++|||+|++|+ ++.|+|+.++++|++++|++||..+ ++
T Consensus 347 a~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~ 424 (452)
T 2cdu_A 347 AKANNLKVSEVI--IADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDML 424 (452)
T ss_dssp HHHTTCCCEEEE--EEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCC
T ss_pred HHHcCCceEEEE--EecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhc
Confidence 999999888764 4556666665 55789999999988999999999999 8999999999999999999999987 89
Q ss_pred cCCChhHHH---HHHHHHhhhh
Q psy9583 844 VHPSLSEAM---KEAAMSIENR 862 (866)
Q Consensus 844 ~~Pt~~e~~---~~~~~~~~~~ 862 (866)
+|||++|++ +.+|+.++++
T Consensus 425 ~~Pt~~e~~~~~~~aa~~~~~~ 446 (452)
T 2cdu_A 425 FQPQFDRPFNYLNILGQAAQAQ 446 (452)
T ss_dssp CCTTTCCSSCHHHHHHHHHHHH
T ss_pred cCCCCCchHHHHHHHHHHHHHh
Confidence 999999974 4566666554
No 38
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=3.4e-54 Score=442.66 Aligned_cols=217 Identities=37% Similarity=0.576 Sum_probs=210.3
Q ss_pred CccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccc
Q psy9583 168 RLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIIN 247 (866)
Q Consensus 168 ~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n 247 (866)
...+++|++++||+||++|.+|++++||+|++.++|+|+|+++|+++++.++++.|.++|+++|++||+++||++||+||
T Consensus 16 ~~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~N 95 (256)
T 3mae_A 16 AGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLN 95 (256)
T ss_dssp CSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTTS
T ss_pred CCceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHhh
Confidence 34678999999999999999999999999999999999999999999987777778999999999999999999999999
Q ss_pred eEEeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccc
Q psy9583 248 ASVDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSML 327 (866)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~ 327 (866)
++|+++++++++++|||+||++++||++|||+|++++|+.+|+++++++++++|+|+|.++|++||||||||+||+|+++
T Consensus 96 a~~~~~~i~~~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G~~~ 175 (256)
T 3mae_A 96 STWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSVQ 175 (256)
T ss_dssp EEEETTEEEECSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCHHHHSCCSEEEECGGGGTCSE
T ss_pred hEEecCEEEEcCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCchhcCCCEEEEecCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 328 STPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 328 ~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+|||||||+|||++|++.++|++.+|++++|++|++++++|||++||.++++|+..
T Consensus 176 ftpIInppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~ 232 (256)
T 3mae_A 176 SMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQA 232 (256)
T ss_dssp EECCCCTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred eEcccCCCCceEEEecccEEEEEEECCEEEEeEEEEEEEEEccccccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988754
No 39
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=2.1e-53 Score=433.61 Aligned_cols=215 Identities=60% Similarity=1.024 Sum_probs=208.5
Q ss_pred cccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceE
Q psy9583 170 EECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINAS 249 (866)
Q Consensus 170 ~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~ 249 (866)
++++|++++||+||++|++|++++||+|++.++|+|+|+++|+++++.+.++.|.++|+++|++||+++||++||+||++
T Consensus 4 ~~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 83 (233)
T 1scz_A 4 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 83 (233)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCE
T ss_pred ceeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhhEE
Confidence 46789999999999999999999999999999999999999999998776667899999999999999999999999999
Q ss_pred EeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccc
Q psy9583 250 VDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLST 329 (866)
Q Consensus 250 ~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~ 329 (866)
|+++++++++++|||+||++++||++|||++++++|+.+|+++++++.+++|+|+|.++|++||||||||+||+|+.+|+
T Consensus 84 ~~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~G~~~~t 163 (233)
T 1scz_A 84 IDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMST 163 (233)
T ss_dssp EETTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGGGTCCCCC
T ss_pred EeCCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEeCCCCCccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 330 PIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 330 ~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|||||||+|||++|++.++|++.+|++++|++|++++++|||++||.++++|...
T Consensus 164 pIin~pq~aIl~vG~~~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~ 218 (233)
T 1scz_A 164 PIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVT 218 (233)
T ss_dssp CCCCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred cccCCCCcEEEEccccEEEEEEECCEEEEEEEEEEEEEEcceeechHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988754
No 40
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=3.8e-52 Score=480.94 Aligned_cols=409 Identities=19% Similarity=0.222 Sum_probs=320.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCC---CeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG---FKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g---~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
++||+|||||+||++||..|++.| .+|+|||++ +.++. .+|. +. .. +......
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~------~~~~~----~~~~----~~------~~----~~~~~~~ 90 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQN------SNISF----LGAG----MA------LW----IGEQIAG 90 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSS------SCCSB----CGGG----HH------HH----HTTSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECC------CCCCc----cccc----cc------hh----hcCccCC
Confidence 389999999999999999999988 999999997 22221 1121 00 00 0000000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEE-cCCceEEEecEEEEecCCCC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQII-NKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~-~~~g~~i~~d~lViATGs~p 544 (866)
.... ......++++.+++++.+..+. ++. ..+.+.+. +.++.++.||+||||||++|
T Consensus 91 ~~~~------------------~~~~~~~~~~~gv~v~~~~~v~~i~~---~~~~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 91 PEGL------------------FYSDKEELESLGAKVYMESPVQSIDY---DAKTVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp SGGG------------------BSCCHHHHHHTTCEEETTCCEEEEET---TTTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred HHHh------------------hhcCHHHHHhCCCEEEeCCEEEEEEC---CCCEEEEEeCCcEEEEECCEEEECCCCCc
Confidence 0000 0111234567899998777554 443 34677775 32246799999999999999
Q ss_pred cCCCCCcCC-----------CceEecc------hhhhccc--cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 545 RSFPGVKFD-----------ENLILSN------KGALEMI--NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 545 ~~~p~~~~~-----------~~~~~t~------~~~~~~~--~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
..|+.++.. ...+++. .++.+.. ..+++++|||+|++|+|+|..|+++|.+|+++++.+++
T Consensus 150 ~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 150 ILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 877655443 3345542 2333333 56899999999999999999999999999999999999
Q ss_pred CC-cccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCcc
Q psy9583 606 LN-TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNID 683 (866)
Q Consensus 606 l~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~ 683 (866)
++ .+++++.+.+.+.|++.||++++++.|++++.+ +.+ .+.+ +|. ++++|.||+|+|++|++++ ++
T Consensus 230 l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~v~~v~~---~g~------~i~~D~Vi~a~G~~p~~~l--l~ 297 (490)
T 2bc0_A 230 LAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN-GKVEKIIT---DKN------EYDVDMVILAVGFRPNTTL--GN 297 (490)
T ss_dssp TTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECS-SSCCEEEE---SSC------EEECSEEEECCCEEECCGG--GT
T ss_pred hhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC-CcEEEEEE---CCc------EEECCEEEECCCCCcChHH--HH
Confidence 98 799999999999999999999999999999863 333 2333 444 7999999999999999987 46
Q ss_pred ccCeeecCCCcEEeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHHHHHHhCCCCCC-CCCCccEEEE
Q psy9583 684 KIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG----------PMLAHKAEEEGIMVAEHISGQKHSI-NFNALPFVIY 752 (866)
Q Consensus 684 ~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~ 752 (866)
.. ++++++|+|.||+++||++|+|||+|||++. +++++.|.+||++||+||++...++ .+...++..+
T Consensus 298 ~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~ 376 (490)
T 2bc0_A 298 GK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISI 376 (490)
T ss_dssp TC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEE
T ss_pred hh-hccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEE
Confidence 66 8888889999999999999999999999973 3689999999999999999875433 2334566677
Q ss_pred ccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhhhcC--CceEEEEEEEECCCCcEEEEEEECC-ChHHHHHHHHHHH
Q psy9583 753 TFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARILG--ETSGMVKILSDMKSDEILGIHIIGP-MASELIAEAVIAI 829 (866)
Q Consensus 753 ~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~kli~~~~~~~ilG~~~~g~-~a~eli~~~~~~i 829 (866)
++|+++++|+++++|+..|+++.+. ++....++.+.+ +..+|+|+++++++++|||+|++|+ ++.|+|+.++++|
T Consensus 377 ~~~~~~~vG~~~~~a~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai 454 (490)
T 2bc0_A 377 YGLHMVSTGLTLEKAKRLGFDAAVT--EYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAI 454 (490)
T ss_dssp TTEEEEEEECCHHHHHHTTCCEEEE--EEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHH
T ss_pred CCcEeEEeeCCHHHHHHcCCceEEE--EEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHH
Confidence 7999999999999999999998886 445566666654 6689999999998999999999999 8999999999999
Q ss_pred HCCCCHHHHccc-cccCCChhHHHHHHHHH
Q psy9583 830 EFRASSEDIARI-CHVHPSLSEAMKEAAMS 858 (866)
Q Consensus 830 ~~~~~~~~l~~~-~~~~Pt~~e~~~~~~~~ 858 (866)
++++|++||..+ +++|||++|++..+...
T Consensus 455 ~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~~ 484 (490)
T 2bc0_A 455 QEGVTIEKLALTDIFFLPHFNKPYNYITMA 484 (490)
T ss_dssp HHTCBHHHHHHSCCCCCTTTCCTTCHHHHH
T ss_pred HcCCCHHHHhhcceecCCCCCchhHHHHHH
Confidence 999999999987 89999999987644433
No 41
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.2e-51 Score=475.33 Aligned_cols=408 Identities=19% Similarity=0.274 Sum_probs=321.9
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCC-CccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALG-GTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~G-G~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||+|||||+||++||.+|++. |.+|+|||++ +..+ ..| .+|.. +. +.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~------~~~~~~~~----~~~~~---------------~~--~~-- 87 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKG------EIYSYAQC----GLPYV---------------IS--GA-- 87 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSS------SCCSBCGG----GHHHH---------------HT--TS--
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC------CCCCCCCC----Ccchh---------------hc--CC--
Confidence 7999999999999999999996 8999999997 2332 111 01100 00 00
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCce--EEEecEEEEecCCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTKE--TITAKYIIIATGSK 543 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g~--~i~~d~lViATGs~ 543 (866)
..++..+.. .....+.++.+++++.+..+. ++. ..+.+.+.. .+|+ ++.||+||+|||+.
T Consensus 88 ---~~~~~~l~~----------~~~~~~~~~~gv~~~~~~~v~~i~~---~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 88 ---IASTEKLIA----------RNVKTFRDKYGIDAKVRHEVTKVDT---EKKIVYAEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp ---SSCGGGGBS----------SCHHHHHHTTCCEEESSEEEEEEET---TTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ---cCCHHHhhh----------cCHHHHHhhcCCEEEeCCEEEEEEC---CCCEEEEEEcCCCceEEEEcCEEEECCCCc
Confidence 001111100 011222345699999876655 443 346777764 3344 79999999999999
Q ss_pred CcCCCCCcCCCceEec---chhhhcccc-----CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHH
Q psy9583 544 ARSFPGVKFDENLILS---NKGALEMIN-----VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAK 615 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t---~~~~~~~~~-----~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~ 615 (866)
|+.|+.++.+...+++ .++...+.. .+++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+
T Consensus 152 p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~ 231 (480)
T 3cgb_A 152 PVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAE 231 (480)
T ss_dssp ECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHH
T ss_pred ccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHH
Confidence 9877655444334443 455544433 68999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
.+.+.+++.||++++++.|+++..++....+.+ ++. ++++|.||+|+|++|++++ ++.+|++++++|+|
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~---~~~------~i~~D~vi~a~G~~p~~~~--l~~~g~~~~~~G~I 300 (480)
T 3cgb_A 232 YIYKEADKHHIEILTNENVKAFKGNERVEAVET---DKG------TYKADLVLVSVGVKPNTDF--LEGTNIRTNHKGAI 300 (480)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESSBEEEEEE---TTE------EEECSEEEECSCEEESCGG--GTTSCCCBCTTSCB
T ss_pred HHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEE---CCC------EEEcCEEEECcCCCcChHH--HHhCCcccCCCCCE
Confidence 999999999999999999999987642222332 332 7999999999999999987 57889999888999
Q ss_pred EeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHHHHHHhCCCCCC-CCCCccEEEEccCceeeeecCH
Q psy9583 696 IVNDNCETNIPNIYAIGDVVRG----------PMLAHKAEEEGIMVAEHISGQKHSI-NFNALPFVIYTFPEIASVGKTE 764 (866)
Q Consensus 696 ~Vd~~l~Ts~~~VyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~~~~~~a~vGl~e 764 (866)
.||+++||++|+|||+|||+.. +++++.|..||++||+||++....+ .+...|++.|++|+++++|+++
T Consensus 301 ~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 380 (480)
T 3cgb_A 301 EVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNE 380 (480)
T ss_dssp CCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCH
T ss_pred EECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCCCH
Confidence 9999999999999999999942 2679999999999999999876554 3556789999999999999999
Q ss_pred HHHHhcCCcEEEEEEecCCchhhhhc-CCceEEEEEEEECCCCcEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHccc-
Q psy9583 765 QYLKKHNISYNVGIFPFLANSRARIL-GETSGMVKILSDMKSDEILGIHIIGPM-ASELIAEAVIAIEFRASSEDIARI- 841 (866)
Q Consensus 765 ~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~kli~~~~~~~ilG~~~~g~~-a~eli~~~~~~i~~~~~~~~l~~~- 841 (866)
++|++.|+++.+..+.. ..++.+. +++.+|+|+++++++++|||+|++|+. +.|+|+.+++||++++|++||.++
T Consensus 381 ~~a~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~ 458 (480)
T 3cgb_A 381 KEAKGLHIPYKTVKVDS--TNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVD 458 (480)
T ss_dssp HHHHHTTCCEEEEEEEE--ESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCC
T ss_pred HHHHHcCCceEEEEEec--CCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcc
Confidence 99999999998877654 3344333 567899999999889999999999998 999999999999999999999997
Q ss_pred cccCCChhHHHHHHH
Q psy9583 842 CHVHPSLSEAMKEAA 856 (866)
Q Consensus 842 ~~~~Pt~~e~~~~~~ 856 (866)
+++|||++|++..+.
T Consensus 459 ~~~~Pt~~e~~~~~~ 473 (480)
T 3cgb_A 459 LSYAPPYNSVWDPIQ 473 (480)
T ss_dssp CCCCTTTCCSSCHHH
T ss_pred cccCCCCCCchhHHH
Confidence 679999999765443
No 42
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1.3e-51 Score=471.48 Aligned_cols=411 Identities=18% Similarity=0.232 Sum_probs=321.6
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+||+|||||+||++||.+|++. |.+|+|||++ +.+| +.+| .... .. .. .+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~------~~~~----~~~~---~~~~-------~~----~~-~~~-- 53 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKG------DFIS----FLSA---GMQL-------YL----EG-KVK-- 53 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESS------SSSS----BCGG---GHHH-------HH----TT-SSC--
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECC------CccC----cccc---cchh-------hh----cC-ccC--
Confidence 4799999999999999999998 8999999997 2332 1111 0000 00 00 000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCce--EEEecEEEEecCCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTKE--TITAKYIIIATGSKA 544 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g~--~i~~d~lViATGs~p 544 (866)
++.. +...+..++++.+++++.+..+. ++. ..+.+.+.+ .+|. ++.||+||||||+.|
T Consensus 54 ----~~~~-----------~~~~~~~~~~~~gv~~~~~~~v~~i~~---~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 54 ----DVNS-----------VRYMTGEKMESRGVNVFSNTEITAIQP---KEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp ----CGGG-----------SBSCCHHHHHHTTCEEEETEEEEEEET---TTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ----CHHH-----------hhcCCHHHHHHCCCEEEECCEEEEEeC---CCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 0000 01112234566799998887775 433 346777764 2343 589999999999999
Q ss_pred cCCCCCcCCCceEecc---hhhhccc---c--CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHH
Q psy9583 545 RSFPGVKFDENLILSN---KGALEMI---N--VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAK 615 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~---~~~~~~~---~--~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~ 615 (866)
..|+.++.+...+++. ++...+. . .+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+
T Consensus 116 ~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 195 (447)
T 1nhp_A 116 FELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTD 195 (447)
T ss_dssp CCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHH
T ss_pred CCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHH
Confidence 8776555444456644 3332222 2 689999999999999999999999999999999999988 68999999
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
.+.+.+++.||++++++.|++++.++....+.+ ++. ++++|.|++|+|++|+.++ ++.. ++++.+|+|
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~---~~~------~i~~d~vi~a~G~~p~~~~--~~~~-~~~~~~G~i 263 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGDGRVQKVVT---DKN------AYDADLVVVAVGVRPNTAW--LKGT-LELHPNGLI 263 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE---SSC------EEECSEEEECSCEEESCGG--GTTT-SCBCTTSCB
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE---CCC------EEECCEEEECcCCCCChHH--HHhh-hhhcCCCcE
Confidence 999999999999999999999986632212333 344 7999999999999999987 4666 788888999
Q ss_pred EeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHHHHHHhCCCCCC-CCCCccEEEEccCceeeeecCH
Q psy9583 696 IVNDNCETNIPNIYAIGDVVRG----------PMLAHKAEEEGIMVAEHISGQKHSI-NFNALPFVIYTFPEIASVGKTE 764 (866)
Q Consensus 696 ~Vd~~l~Ts~~~VyA~GD~a~~----------~~~~~~A~~~g~~aa~~i~g~~~~~-~~~~~p~~~~~~~~~a~vGl~e 764 (866)
.||++|||++|+|||+|||+.. +++++.|.+||++||+||++...++ .+...|++.|++|+++++|+++
T Consensus 264 ~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 343 (447)
T 1nhp_A 264 KTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINE 343 (447)
T ss_dssp CCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCH
T ss_pred EECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCH
Confidence 9999999999999999999962 4689999999999999999865433 2456789999999999999999
Q ss_pred HHHHhcCCcEEEEEEecCCchhhhhc-CCceEEEEEEEECCCCcEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHccc-
Q psy9583 765 QYLKKHNISYNVGIFPFLANSRARIL-GETSGMVKILSDMKSDEILGIHIIGPM-ASELIAEAVIAIEFRASSEDIARI- 841 (866)
Q Consensus 765 ~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~kli~~~~~~~ilG~~~~g~~-a~eli~~~~~~i~~~~~~~~l~~~- 841 (866)
++|+..|+++.+.. +....++.+. +++.+|+|+++++++++|||+|++|+. +.|+|+.++++|++++|++||..+
T Consensus 344 ~~a~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~ 421 (447)
T 1nhp_A 344 VMAQKLGKETKAVT--VVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYAD 421 (447)
T ss_dssp HHHHHHTCCCEEEE--EEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCC
T ss_pred HHHHHcCCceEEEE--EEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcc
Confidence 99999999887764 3455566655 567899999999889999999999998 999999999999999999999997
Q ss_pred cccCCChhHHHH---HHHHHhh
Q psy9583 842 CHVHPSLSEAMK---EAAMSIE 860 (866)
Q Consensus 842 ~~~~Pt~~e~~~---~~~~~~~ 860 (866)
+++|||++|++. .+|..+.
T Consensus 422 ~~~~Pt~~e~~~~~~~aa~~~~ 443 (447)
T 1nhp_A 422 FFFQPAFDKPWNIINTAALEAV 443 (447)
T ss_dssp CCCCTTTCCSSCHHHHHHHHHH
T ss_pred eecCCCCCCcccHHHHHHHHHh
Confidence 799999999764 4444443
No 43
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=8e-53 Score=430.91 Aligned_cols=208 Identities=27% Similarity=0.469 Sum_probs=200.9
Q ss_pred ccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEE
Q psy9583 171 ECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASV 250 (866)
Q Consensus 171 ~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~ 250 (866)
++ |+++|||+||++|++|++++||+|++.++|+|+|+++|+++++ .+.|+|+++|++||+++||++||+||++|
T Consensus 16 ~r-pls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~~~k~-----~~~kls~~~~iikAva~AL~~~P~~Na~~ 89 (250)
T 3l60_A 16 VR-PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS-----AAPEITPFALTLRLLVIALKHNVILNSTW 89 (250)
T ss_dssp CC-CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT-----TCTTCCHHHHHHHHHHHHHHHCGGGSEEE
T ss_pred CC-CCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhCHHhhEEE
Confidence 45 9999999999999999999999999999999999999999864 37899999999999999999999999999
Q ss_pred eC----CeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCcc
Q psy9583 251 DG----NNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSM 326 (866)
Q Consensus 251 ~~----~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~ 326 (866)
++ +++++++++|||+||++++||++|||+|++++|+.+|+++++++++++|+|+|.++|++||||||||+||+|++
T Consensus 90 ~~~~~~~~i~~~~~vnigvAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G~~ 169 (250)
T 3l60_A 90 VDSGEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALGVD 169 (250)
T ss_dssp ECTTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGGGGTCS
T ss_pred eccCCCCeEEEcCceeEEEEEEcCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCChhhcCCCEEEEEcCCCCCcc
Confidence 75 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 327 LSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 327 ~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
+|+|||||||+|||++|++.++|++.+|++++|++|++++++|||++||.++++|+..
T Consensus 170 ~ftpIinppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~ 227 (250)
T 3l60_A 170 DGVPVINHPEAAILGLGAIKPRPVVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCE 227 (250)
T ss_dssp SCCCCCCTTCSEEEEECCCEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred eeEeeeCCCCceEEEecceEEEeEEECCEEEEEEEeEEEEEecccccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988754
No 44
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2e-51 Score=484.65 Aligned_cols=404 Identities=21% Similarity=0.275 Sum_probs=318.3
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceecc-ccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGC-IPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~-~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||+|||||+||++||.+|++. +++|+|||+++ .++. ..| +|. .. .......
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~------~~~~----~~~~l~~-----------~~----~~~~~~~ 56 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE------YVSF----ANCGLPY-----------HI----SGEIAQR 56 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS------CSSB----CGGGHHH-----------HH----TSSSCCG
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC------Cccc----cccCchH-----------Hh----cCCcCCh
Confidence 6899999999999999999998 79999999973 3220 000 110 00 0000000
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCc--eEEEecEEEEecCCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTK--ETITAKYIIIATGSK 543 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g--~~i~~d~lViATGs~ 543 (866)
... +......+.++.+++++.+..+. ++. ..+.+.+.. .++ .++.||+||||||+.
T Consensus 57 ~~~-----------------~~~~~~~~~~~~~i~~~~~~~V~~id~---~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 57 SAL-----------------VLQTPESFKARFNVEVRVKHEVVAIDR---AAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp GGG-----------------BCCCHHHHHHHHCCEEETTEEEEEEET---TTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHh-----------------hccCHHHHHHhcCcEEEECCEEEEEEC---CCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 000 01112333445789988776665 443 556777764 223 479999999999999
Q ss_pred CcCCCCCcCCCceEecchhhh---ccc-----cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHH
Q psy9583 544 ARSFPGVKFDENLILSNKGAL---EMI-----NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAK 615 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~~~~---~~~-----~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~ 615 (866)
|+.|+.++.+...+++...+. .+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++.+
T Consensus 117 p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~ 196 (565)
T 3ntd_A 117 PIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAG 196 (565)
T ss_dssp ECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHH
Confidence 987766655445555544322 221 357899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEE-------------------cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKI-------------------NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~-------------------~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+.+.|++.||++++++.+++++. .++.+.+.+ .+|. ++++|.|++|+|++|+
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~------~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL--SNGE------LLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE--TTSC------EEEESEEEECSCEEEC
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE--cCCC------EEEcCEEEECcCCccc
Confidence 999999999999999999999987 345555555 3665 8999999999999999
Q ss_pred CCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCC-------C---CCcHHHHHHHHHHHHHHHhCCCCCCCCC-
Q psy9583 677 TNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVR-------G---PMLAHKAEEEGIMVAEHISGQKHSINFN- 745 (866)
Q Consensus 677 ~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~-------~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~- 745 (866)
+++ ++.+|++++++|+|.||+++||++|+|||+|||+. . +++++.|..||++||+||+|....+...
T Consensus 269 ~~l--~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~ 346 (565)
T 3ntd_A 269 TQL--ARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQ 346 (565)
T ss_dssp CHH--HHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBC
T ss_pred hHH--HHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcc
Confidence 986 57889999989999999999999999999999983 2 3589999999999999999977654322
Q ss_pred CccEEEEccCceeeeecCHHHHHhcCCcEEEEEEecCCchhhhhc-CCceEEEEEEEECCCCcEEEEEEECCCh-HHHHH
Q psy9583 746 ALPFVIYTFPEIASVGKTEQYLKKHNISYNVGIFPFLANSRARIL-GETSGMVKILSDMKSDEILGIHIIGPMA-SELIA 823 (866)
Q Consensus 746 ~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~kli~~~~~~~ilG~~~~g~~a-~eli~ 823 (866)
..+++.|++|+++++|++|+||++.|+++.+..+ ....++.++ +++.||+|+++|+++++|||+|++|+++ .|+|+
T Consensus 347 ~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~ 424 (565)
T 3ntd_A 347 GTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYV--HTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRID 424 (565)
T ss_dssp CCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEE--EEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHH
T ss_pred cceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEE--ecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHH
Confidence 2345678999999999999999999999887554 344566565 6788999999999999999999999998 99999
Q ss_pred HHHHHHHCCCCHHHHcccccc-CCChhHH
Q psy9583 824 EAVIAIEFRASSEDIARICHV-HPSLSEA 851 (866)
Q Consensus 824 ~~~~~i~~~~~~~~l~~~~~~-~Pt~~e~ 851 (866)
.+++||++++|++||+++.+. ||++++.
T Consensus 425 ~~~~ai~~~~~~~~l~~~~~~~~P~~~~~ 453 (565)
T 3ntd_A 425 VMAVAQRAGMTVEQLQHLELSYAPPYGSA 453 (565)
T ss_dssp HHHHHHHTTCBHHHHTTCCCCCCTTTCCS
T ss_pred HHHHHHHcCCCHHHHhhhhhccCcccCch
Confidence 999999999999999999765 5888754
No 45
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.9e-51 Score=486.44 Aligned_cols=403 Identities=22% Similarity=0.302 Sum_probs=319.0
Q ss_pred ccceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceecc-ccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGC-IPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~-~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
++||+|||||+||++||.+|++. |++|+|||+++ .++ +..| +|. .. ...-..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~------~~~----~~~~~lp~-----------~~----~g~~~~ 90 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE------YIS----FANCGLPY-----------YI----GGVITE 90 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS------CSS----BCGGGHHH-----------HH----TTSSCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC------Ccc----ccCCCCch-----------hh----cCcCCC
Confidence 48999999999999999999998 89999999973 222 0000 110 00 000000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCce--EEEecEEEEecCC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTKE--TITAKYIIIATGS 542 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g~--~i~~d~lViATGs 542 (866)
.. ..+...+..+.++.++++..+..+. ++. ..+.+.+.. .++. .+.||+||+|||+
T Consensus 91 ~~-----------------~~~~~~~~~~~~~~gi~v~~~~~V~~id~---~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 91 RQ-----------------KLLVQTVERMSKRFNLDIRVLSEVVKINK---EEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp GG-----------------GGBSSCHHHHHHHTTCEEECSEEEEEEET---TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred hH-----------------HhhccCHHHHHHhcCcEEEECCEEEEEEC---CCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 00 0011223445667899998877666 433 456777764 3343 7899999999999
Q ss_pred CCcCCCCCcC-CCceEecchhhhcc--------ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHH
Q psy9583 543 KARSFPGVKF-DENLILSNKGALEM--------INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEI 613 (866)
Q Consensus 543 ~p~~~p~~~~-~~~~~~t~~~~~~~--------~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~ 613 (866)
.|+.|+.++. +...+++..+.... ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.+++++
T Consensus 151 ~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 230 (588)
T 3ics_A 151 KPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEM 230 (588)
T ss_dssp EECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHH
T ss_pred CCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHH
Confidence 9987765554 34455655443332 14589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCC
Q psy9583 614 AKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENN 693 (866)
Q Consensus 614 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G 693 (866)
.+.+.+.|++.||++++++.|++++.+++. +.+. +|. ++++|.||+|+|++|++++ ++.+|++++++|
T Consensus 231 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~--~g~------~i~~D~Vi~a~G~~p~~~~--l~~~g~~~~~~g 298 (588)
T 3ics_A 231 AAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLK--SGS------VIQTDMLILAIGVQPESSL--AKGAGLALGVRG 298 (588)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEET--TSC------EEECSEEEECSCEEECCHH--HHHTTCCBCGGG
T ss_pred HHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEEC--CCC------EEEcCEEEEccCCCCChHH--HHhcCceEcCCC
Confidence 999999999999999999999999876543 3443 565 8999999999999999987 688899999899
Q ss_pred cEEeCCCCCCCCCCEEEecccCC-------C---CCcHHHHHHHHHHHHHHHhC-CCCCCCCCCcc--EEEEccCceeee
Q psy9583 694 FIIVNDNCETNIPNIYAIGDVVR-------G---PMLAHKAEEEGIMVAEHISG-QKHSINFNALP--FVIYTFPEIASV 760 (866)
Q Consensus 694 ~i~Vd~~l~Ts~~~VyA~GD~a~-------~---~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p--~~~~~~~~~a~v 760 (866)
+|.||+++||++|+|||+|||+. . +++++.|..||++||+||+| ....+. ...| ...|++|+++++
T Consensus 299 ~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~~~a~v 377 (588)
T 3ics_A 299 TIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYK-GTLGTSVAKVFDLTVATT 377 (588)
T ss_dssp CBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCC-CBCCCEEEEETTEEEEEE
T ss_pred CEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccC-CcccceEEEECCeEEEEe
Confidence 99999999999999999999994 2 46899999999999999999 554432 2333 345899999999
Q ss_pred ecCHHHHHhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCC-hHHHHHHHHHHHHCCCCHHHHc
Q psy9583 761 GKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPM-ASELIAEAVIAIEFRASSEDIA 839 (866)
Q Consensus 761 Gl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~-a~eli~~~~~~i~~~~~~~~l~ 839 (866)
|+||+||++.|+++.+.+++.... ...+.+++.||+|+++|+++++|||+|++|++ +.|+|+.+++||++++|++||+
T Consensus 378 Glte~~a~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~ 456 (588)
T 3ics_A 378 GLNEKILKRLNIPYEVVHVQANSH-AGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLP 456 (588)
T ss_dssp ECCHHHHHHTTCCCEEEEEEEESS-CTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGG
T ss_pred cCCHHHHHHcCCCeEEEEEecCCc-cccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhh
Confidence 999999999999999887753222 12445678999999999999999999999985 8999999999999999999999
Q ss_pred cccccC-CChhHH
Q psy9583 840 RICHVH-PSLSEA 851 (866)
Q Consensus 840 ~~~~~~-Pt~~e~ 851 (866)
+++++| |++++.
T Consensus 457 ~~~~~~~P~~~~~ 469 (588)
T 3ics_A 457 DLELSYAPPYSSA 469 (588)
T ss_dssp GCCCCCSTTTCCS
T ss_pred hhhhccCCCcccc
Confidence 999887 987754
No 46
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=1.1e-51 Score=423.67 Aligned_cols=214 Identities=33% Similarity=0.474 Sum_probs=205.4
Q ss_pred cccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceE
Q psy9583 170 EECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINAS 249 (866)
Q Consensus 170 ~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~ 249 (866)
.+.+|++++||+||++|++||+++||+|++.++|+|+|+++|+++++.+. +.|.++|+++|++||+++||++||+||++
T Consensus 15 ~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~r~~~k~~~~-~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 93 (243)
T 1dpb_A 15 IEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAE-KAGVKLTVLPLLLKACAYLLKELPDFNSS 93 (243)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHHH-HTTCCCCSHHHHHHHHHHHHHHSGGGGEE
T ss_pred ceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHHHHHHhhhhh-hccCCCChHHHHHHHHHHHHHhChHhhEE
Confidence 46789999999999999999999999999999999999999999987544 35899999999999999999999999999
Q ss_pred EeC--CeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccc
Q psy9583 250 VDG--NNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSML 327 (866)
Q Consensus 250 ~~~--~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~ 327 (866)
|++ +++++++++|||+||++++||++|||+++|++|+.+|+++++++++++|+|+|.++|++||||||||+||+|+++
T Consensus 94 ~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~~ 173 (243)
T 1dpb_A 94 LAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTA 173 (243)
T ss_dssp ECTTSSCEEECSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCCSEEEEECTTTCCSC
T ss_pred EecCCCeEEEeCceeEEEEEECCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccc
Confidence 986 499999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 328 STPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 328 ~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+|||||||+|||++|++.++|++.+|++++|++|++++++|||++||.++++|...
T Consensus 174 ~tpIin~pq~aIl~vG~~~~~pv~~~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~ 230 (243)
T 1dpb_A 174 FTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDCRVINGAAAARFTKR 230 (243)
T ss_dssp CCCCCCTTSSEEEEECCCEEEEEECSSSEEEEEEEEEEEEEETTTSCHHHHHHHHHH
T ss_pred eECccCCCCCeEEEccccEEEEEEECCeEEEEEEEEEEEEECcccccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988754
No 47
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=2.7e-51 Score=423.82 Aligned_cols=215 Identities=31% Similarity=0.476 Sum_probs=203.9
Q ss_pred CccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccc
Q psy9583 168 RLEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIIN 247 (866)
Q Consensus 168 ~~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n 247 (866)
...+++|+++|||+||++|++|+ ++||+|++.++|+|+|+++|+++++. .++.|.++|+++|++||+++||++||+||
T Consensus 29 ~~~~~~p~~~~rk~ia~~m~~S~-~~P~~~~~~evDvt~l~~~r~~~k~~-~~~~g~kls~~~~~ikAva~Al~~~P~~N 106 (262)
T 2ii3_A 29 GKDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKPI-AFARGIKLSFMPFFLKAASLGLLQFPILN 106 (262)
T ss_dssp CCCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHHHHHHHHH-HHHTTCCCCSHHHHHHHHHHHHHHCGGGS
T ss_pred CCcceecCCHHHHHHHHHHHHhh-hCCeEEEEEEEEhHHHHHHHHHHhhh-hhhccCCccHHHHHHHHHHHHHHhChHhh
Confidence 34578999999999999999997 59999999999999999999999874 33458999999999999999999999999
Q ss_pred eEEeC--CeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCc
Q psy9583 248 ASVDG--NNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGS 325 (866)
Q Consensus 248 ~~~~~--~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~ 325 (866)
++|++ +++++++++|||+||++++||++|||+|++++|+.+|+++++++++++|+|+|.++|++||||||||+||+|+
T Consensus 107 a~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggTftISNlG~~G~ 186 (262)
T 2ii3_A 107 ASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGG 186 (262)
T ss_dssp EEECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGGTCC
T ss_pred EEEeCCCCEEEEecccceEEEEEcCCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHhCCCCcccCCCCEEEEEeCCCCCc
Confidence 99985 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCceEEEEeccceeeEEEe-CCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 326 MLSTPIINPPQSAILGVHAIKKRVIVE-NNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 326 ~~~~~ii~~p~~~il~vg~~~~~~~~~-~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
++|+|||||||+|||++|++.++|++. +|++++|++|++++++|||++||.++++|+..
T Consensus 187 ~~~tPIinppq~aIL~vG~~~~~pv~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~ 246 (262)
T 2ii3_A 187 TYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNL 246 (262)
T ss_dssp SCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred cceECccCCCcceEEEcCccEEEEEEecCCcEEEEeeeEEEEEECcceecHHHHHHHHHH
Confidence 999999999999999999999999996 78999999999999999999999999988754
No 48
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-51 Score=418.18 Aligned_cols=213 Identities=31% Similarity=0.462 Sum_probs=204.1
Q ss_pred cccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceE
Q psy9583 170 EECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINAS 249 (866)
Q Consensus 170 ~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~ 249 (866)
.+++|++++||+||++|++||+++||+|++.++|+|+|+++|+++++.+++ +.++|+++|++||+++||++||+||++
T Consensus 12 ~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~--~~kls~~~~~ikAv~~Al~~~P~~Na~ 89 (239)
T 3b8k_A 12 FTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEG--RSKISVNDFIIKASALACLKVPEANSS 89 (239)
T ss_dssp CCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHHTT--SSCCCHHHHHHHHHHHHHHHCCCSCTT
T ss_pred ceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHHHHHHHhhhhc--cCCCCHHHHHHHHHHHHHHhChHhhEE
Confidence 567899999999999999999999999999999999999999999875433 369999999999999999999999999
Q ss_pred EeCCeeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccc
Q psy9583 250 VDGNNIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLST 329 (866)
Q Consensus 250 ~~~~~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~ 329 (866)
|+++++++++++|||+||++++||++|||+++|++|+.+|+++++++.+++|+|+|.++|++||||||||+||+|+++|+
T Consensus 90 ~~~~~i~~~~~v~igvAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~~ft 169 (239)
T 3b8k_A 90 WMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFS 169 (239)
T ss_dssp SCCCSSSCSCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSEEEEECCSSCCSSCC
T ss_pred EECCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEEEEeccceeeEEE--eCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 330 PIINPPQSAILGVHAIKKRVIV--ENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 330 ~ii~~p~~~il~vg~~~~~~~~--~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|||||||+|||++|++.++|++ ++|++++|++|++++++|||++||.++++|...
T Consensus 170 piin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~ 226 (239)
T 3b8k_A 170 AIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAE 226 (239)
T ss_dssp CCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHH
T ss_pred CcCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHH
Confidence 9999999999999999999999 588999999999999999999999999988754
No 49
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=2.6e-50 Score=408.30 Aligned_cols=203 Identities=38% Similarity=0.587 Sum_probs=194.9
Q ss_pred ccccccCchhHHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccce
Q psy9583 169 LEECVPMSRLRLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINA 248 (866)
Q Consensus 169 ~~~~~~~~~~r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~ 248 (866)
..+++|++++||+||++|++|++++||+|++.++|+|+|+++|+++++. |.|+|+++|++||+++||++||+||+
T Consensus 5 ~~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~-----g~kls~~~~~ikA~~~Al~~~P~~N~ 79 (224)
T 3rqc_A 5 REEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKAR-----NRKVTVTGFLARIVPSILKQYPYLNA 79 (224)
T ss_dssp -CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHHHHTTT-----TCCCCHHHHHHHHHHHHHHHSGGGSB
T ss_pred CceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHhCHHhhe
Confidence 3578999999999999999999999999999999999999999998753 78999999999999999999999999
Q ss_pred EEeCC--eeEEccceeEEEEEecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCcc
Q psy9583 249 SVDGN--NIIYHKYYDIGIAISSSRGLVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSM 326 (866)
Q Consensus 249 ~~~~~--~~~~~~~~~i~~av~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~ 326 (866)
+|+++ ++++++++|||+||++++||++|||++++++|+.+|+++++++++++|+|+|.++|++||||||||+||+|++
T Consensus 80 ~~~~~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~~~e~~ggtftISnlG~~G~~ 159 (224)
T 3rqc_A 80 IYDETRRVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEVQDSTFTITNVGTIGGI 159 (224)
T ss_dssp BCCSSTTCCCEECSCCEEEEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCCGGGSCCCSEEEEECTTTCCS
T ss_pred EEeCCCCEEEEeCccceEeEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCcCCcc
Confidence 99987 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCceEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 327 LSTPIINPPQSAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 327 ~~~~ii~~p~~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
+|+|||||||+|||++|++.++|+ |++|++++++|||++||.++++|...
T Consensus 160 ~~tpiin~pq~aIl~vG~~~~~p~--------r~~m~lsls~DHRviDGa~aa~Fl~~ 209 (224)
T 3rqc_A 160 MSTPIINYPEVAILGVHRILEREG--------RKYMYLSLSCDHRLIDGAVATRFIVD 209 (224)
T ss_dssp EEECCCCTTBSEEEEECCCEEETT--------EEECCEEEEEETTTSCHHHHHHHHHH
T ss_pred ceEeccCCCCceEEEecccEEECC--------ceEEEEEEEeccceecHHHHHHHHHH
Confidence 999999999999999999998885 89999999999999999999988754
No 50
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=7.1e-44 Score=399.29 Aligned_cols=362 Identities=18% Similarity=0.240 Sum_probs=278.3
Q ss_pred cccccceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYG 464 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~g 464 (866)
|+.++||+|||||+||++||..|++.| .+|+|||++. ||.|++.++... +. .+
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~---------------g~~~~~~~l~~~---------~~-~~ 55 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD---------------GRSYSKPMLSTG---------FS-KN 55 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC---------------CCEECGGGGGGT---------TT-TT
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC---------------CCccCcccccHH---------Hh-CC
Confidence 444699999999999999999999998 5699999861 344444332110 00 00
Q ss_pred ccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEE-EeccccCcccEEEEEcCCceEEEecEEEEecCCC
Q psy9583 465 INTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAI-FTGKIQNNFHEIQIINKTKETITAKYIIIATGSK 543 (866)
Q Consensus 465 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v-~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~ 543 (866)
.....+ ....+..++++.+++++.+..+ .++. ..+.+.+ . +..+.||+||+|||+.
T Consensus 56 -------~~~~~~----------~~~~~~~~~~~~~v~~~~~~~v~~i~~---~~~~v~~--~-~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 56 -------KDADGL----------AMAEPGAMAEQLNARILTHTRVTGIDP---GHQRIWI--G-EEEVRYRDLVLAWGAE 112 (384)
T ss_dssp -------CCHHHH----------EEECHHHHHHHTTCEEECSCCCCEEEG---GGTEEEE--T-TEEEECSEEEECCCEE
T ss_pred -------CCHHHh----------hccCHHHHHHhCCcEEEeCCEEEEEEC---CCCEEEE--C-CcEEECCEEEEeCCCC
Confidence 011111 0112344567789999876543 3443 3355555 3 3579999999999999
Q ss_pred CcCCCCCcCCCceEecchhhhccc------cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-ccHHHHHH
Q psy9583 544 ARSFPGVKFDENLILSNKGALEMI------NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKK 616 (866)
Q Consensus 544 p~~~p~~~~~~~~~~t~~~~~~~~------~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-~d~~~~~~ 616 (866)
|..|+.++.....+++.+++.+.. ..+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +++++.+.
T Consensus 113 p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~ 192 (384)
T 2v3a_A 113 PIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKA 192 (384)
T ss_dssp ECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHH
T ss_pred cCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHH
Confidence 987766554444567665554432 24899999999999999999999999999999999999886 59999999
Q ss_pred HHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEE
Q psy9583 617 AFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFII 696 (866)
Q Consensus 617 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 696 (866)
+.+.+++.||++++++.|++++.+++++.+.+. +|. ++++|.|++|+|++|+.++ ++.+|++++ +| |.
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~--~g~------~i~~d~vv~a~G~~p~~~l--~~~~g~~~~-~g-i~ 260 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLS--DGE------VIPCDLVVSAVGLRPRTEL--AFAAGLAVN-RG-IV 260 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETTEEEEEET--TSC------EEEESEEEECSCEEECCHH--HHHTTCCBS-SS-EE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCCEEEEEEC--CCC------EEECCEEEECcCCCcCHHH--HHHCCCCCC-CC-EE
Confidence 999999999999999999999987776666654 665 7999999999999999985 678899987 67 99
Q ss_pred eCCCCCCCCCCEEEecccCC--C--CCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEEEcc-CceeeeecCHHHHHhcC
Q psy9583 697 VNDNCETNIPNIYAIGDVVR--G--PMLAHKAEEEGIMVAEHISGQKHSINFNALPFVIYTF-PEIASVGKTEQYLKKHN 771 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a~--~--~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~-~~~a~vGl~e~~a~~~~ 771 (866)
||+++||++|+|||+|||+. + ..+++.|..||+++|+||+|...++++..+|+++|+. +++..+|+++.+. +
T Consensus 261 vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~---~ 337 (384)
T 2v3a_A 261 VDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGMD---G 337 (384)
T ss_dssp ECTTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECCTTSCEEEECCCTTCC---C
T ss_pred ECCCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCeeEEEecCCCCCC---c
Confidence 99999999999999999984 2 2368889999999999999988788889999999886 5899999875311 1
Q ss_pred CcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHH
Q psy9583 772 ISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAV 826 (866)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~ 826 (866)
+..+.+++.||+|++++ ++++|+|++++|+.|.|+++.+.
T Consensus 338 --------------~~~~~~~~~g~~~~~~~-~~~~i~G~~~~g~~a~e~~~~~~ 377 (384)
T 2v3a_A 338 --------------QWLVEGSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNK 377 (384)
T ss_dssp --------------EEEEEEETTEEEEEEEC-TTSCEEEEEEEGGGGGGHHHHHT
T ss_pred --------------eEEEEecCCcEEEEEEc-cCCEEEEEEEECcchHHHHHHHH
Confidence 11112235689999887 67999999999999999887654
No 51
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.2e-43 Score=393.48 Aligned_cols=363 Identities=24% Similarity=0.274 Sum_probs=280.2
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++.+|+|||||+||++||..|+..+.+|+|||+++ .++.. . | . ....+.. .....
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~------~~~y~----~--~---~-----l~~~l~g-----~~~~~ 62 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEK------YLPYY----R--P---R-----LNEIIAK-----NKSID 62 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSS------SCCBC----G--G---G-----HHHHHHS-----CCCGG
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCC------CCCcc----c--C---h-----hhHHHcC-----CCCHH
Confidence 35789999999999999999987899999999973 22210 0 0 0 0000000 00100
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
.+......++++.+++++.++.+. ++. ..+.+.+ ++++++.||+||||||+.|+.|
T Consensus 63 ------------------~l~~~~~~~~~~~~i~~~~~~~V~~id~---~~~~v~~--~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 63 ------------------DILIKKNDWYEKNNIKVITSEFATSIDP---NNKLVTL--KSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp ------------------GTBSSCHHHHHHTTCEEECSCCEEEEET---TTTEEEE--TTSCEEECSEEEECCCEEECCC
T ss_pred ------------------HccCCCHHHHHHCCCEEEeCCEEEEEEC---CCCEEEE--CCCCEEECCEEEEecCCCcCCC
Confidence 011112345677899999986555 554 3455544 5678899999999999999877
Q ss_pred CCCcCCCceEec---chhhhcccc---CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-ccHHHHHHHHHH
Q psy9583 548 PGVKFDENLILS---NKGALEMIN---VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAKKAFHL 620 (866)
Q Consensus 548 p~~~~~~~~~~t---~~~~~~~~~---~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-~d~~~~~~l~~~ 620 (866)
+.++.+ .+++ .++...+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 120 ~i~G~~--~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~ 197 (385)
T 3klj_A 120 KVPHAD--EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDK 197 (385)
T ss_dssp CCTTCS--CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHH
T ss_pred CCCCCC--CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHH
Confidence 665544 3443 445444432 2789999999999999999999999999999999999985 899999999999
Q ss_pred HHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCC
Q psy9583 621 LNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDN 700 (866)
Q Consensus 621 l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~ 700 (866)
+++.||++++++.++++ |. ++++|.|++|+|++|++++ ++.+|++.+ +| |.||++
T Consensus 198 l~~~gV~~~~~~~v~~i---------------g~------~~~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g-i~vd~~ 252 (385)
T 3klj_A 198 LDRLGIKIYTNSNFEEM---------------GD------LIRSSCVITAVGVKPNLDF--IKDTEIASK-RG-ILVNDH 252 (385)
T ss_dssp HHTTTCEEECSCCGGGC---------------HH------HHHHSEEEECCCEEECCGG--GTTSCCCBS-SS-EEECTT
T ss_pred HHhCCCEEEeCCEEEEc---------------Ce------EEecCeEEECcCcccChhh--hhhcCCCcC-CC-EEECCC
Confidence 99999999999988765 22 6889999999999999988 578888886 56 999999
Q ss_pred CCCCCCCEEEecccCC----CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE--EccCceeeeecCHHHHHhcCCcE
Q psy9583 701 CETNIPNIYAIGDVVR----GPMLAHKAEEEGIMVAEHISGQKHSINFNALPFVI--YTFPEIASVGKTEQYLKKHNISY 774 (866)
Q Consensus 701 l~Ts~~~VyA~GD~a~----~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vGl~e~~a~~~~~~~ 774 (866)
|+|++|+|||+|||+. .+.+++.|..||++||.||+|...++.. ..|+++ +++++++++|+++.+. .+.
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~----~~~ 327 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSE-IIPSPILKVSGISIISCGDIENNK----PSK 327 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCCCCC-CCCCCEEEETTEEEEEESCCTTCC----CSE
T ss_pred cccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCCcCCCC-CCCcEEEEeCCCcEEEEcCCCCCC----CeE
Confidence 9999999999999997 4678999999999999999998765432 245554 5899999999997642 121
Q ss_pred EEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHccccccCCChhHHHHH
Q psy9583 775 NVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIARICHVHPSLSEAMKE 854 (866)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~ 854 (866)
.. . ..+..+|.|++++ +|+|+|++++|+.+.++ .+..+|+++.++++| ||++|.|.+
T Consensus 328 ~~-~-----------~~~~~~~~~~~~~--~~~l~g~~~~g~~~~~~--~~~~~i~~~~~~~~~-------~~~~E~~~~ 384 (385)
T 3klj_A 328 VF-R-----------STQEDKYIVCMLK--ENKIDAAAVIGDVSLGT--KLKKAIDSSKSFDNI-------SSLDAILNN 384 (385)
T ss_dssp EE-E-----------EECSSCEEEEEEE--TTEEEEEEEESCHHHHH--HHHHHHHTTCBCSCC-------SCHHHHHTT
T ss_pred EE-E-----------ECCCCeEEEEEEE--CCEEEEEEEECCcHHHH--HHHHHHHcCCCcccc-------cCHHHHHhh
Confidence 11 1 1235679999995 68999999999986665 689999999999999 999999863
No 52
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-42 Score=385.48 Aligned_cols=333 Identities=23% Similarity=0.352 Sum_probs=249.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
-|++|||||+||++||..|++.| +|+|||+++. .+- ++.++. ..+ . +.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~------~~~---------~~~~l~-----~~~----~--g~----- 56 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV------PYY---------SKPMLS-----HYI----A--GF----- 56 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS------CCC---------CSTTHH-----HHH----T--TS-----
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC------Ccc---------ccchhH-----HHH----h--CC-----
Confidence 58999999999999999999999 9999999731 110 111110 000 0 00
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEE-EEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHA-IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~-v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
.++..+. .....++++.+++++.++. ..++. ..+.+. .++.++.||+||||||++|+.|+.
T Consensus 57 -~~~~~~~-----------~~~~~~~~~~~v~~~~g~~v~~id~---~~~~V~---~~g~~~~~d~lViATGs~p~~p~i 118 (367)
T 1xhc_A 57 -IPRNRLF-----------PYSLDWYRKRGIEIRLAEEAKLIDR---GRKVVI---TEKGEVPYDTLVLATGARAREPQI 118 (367)
T ss_dssp -SCGGGGC-----------SSCHHHHHHHTEEEECSCCEEEEET---TTTEEE---ESSCEEECSEEEECCCEEECCCCS
T ss_pred -CCHHHhc-----------cCCHHHHHhCCcEEEECCEEEEEEC---CCCEEE---ECCcEEECCEEEECCCCCCCCCCC
Confidence 1111110 1123345667999999864 44654 234443 346789999999999999987765
Q ss_pred CcCCCceEec---chhhhcccc---CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 550 VKFDENLILS---NKGALEMIN---VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 550 ~~~~~~~~~t---~~~~~~~~~---~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
++ ...+++ .+++..+.. .+++++|||+|++|+|+|..|+++|.+|+++++.+++++ +++++.+.+.+.|++
T Consensus 119 ~G--~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~ 195 (367)
T 1xhc_A 119 KG--KEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEE 195 (367)
T ss_dssp BT--GGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHH
T ss_pred CC--cCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHH
Confidence 54 233443 344444322 358999999999999999999999999999999999999 999999999999999
Q ss_pred cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCC
Q psy9583 624 QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCET 703 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~T 703 (866)
.||+++++++|++++ .+. +.+. +| . +++|.|++|+|++|++++ ++++|++.+ +| |.||++|||
T Consensus 196 ~gV~i~~~~~v~~i~--~~~--v~~~--~g------~-i~~D~vi~a~G~~p~~~l--l~~~gl~~~-~g-i~Vd~~~~t 258 (367)
T 1xhc_A 196 TGVKFFLNSELLEAN--EEG--VLTN--SG------F-IEGKVKICAIGIVPNVDL--ARRSGIHTG-RG-ILIDDNFRT 258 (367)
T ss_dssp TTEEEECSCCEEEEC--SSE--EEET--TE------E-EECSCEEEECCEEECCHH--HHHTTCCBS-SS-EECCTTSBC
T ss_pred CCCEEEcCCEEEEEE--eeE--EEEC--CC------E-EEcCEEEECcCCCcCHHH--HHhCCCCCC-CC-EEECCCccc
Confidence 999999999999987 222 3342 33 2 899999999999999985 688889886 56 999999999
Q ss_pred CCCCEEEecccCCC----CCcHHHHHHHHHHHHHHHhCCCCCCCCCCccE--EEEccCceeeeecCHHHHHhcCCcEEEE
Q psy9583 704 NIPNIYAIGDVVRG----PMLAHKAEEEGIMVAEHISGQKHSINFNALPF--VIYTFPEIASVGKTEQYLKKHNISYNVG 777 (866)
Q Consensus 704 s~~~VyA~GD~a~~----~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~a~vGl~e~~a~~~~~~~~~~ 777 (866)
+.|+|||+|||+.. +++++.|.+||++||+||++...++++ .+|+ +.|++|+++++|++++++. +
T Consensus 259 ~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~~~~vG~~~~~~~----~---- 329 (367)
T 1xhc_A 259 SAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGEPRRYNF-KFRSTVFKFGKLQIAIIGNTKGEGK----W---- 329 (367)
T ss_dssp SSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCCCCCCS-SCCEEEEEETTEEEEEEECCSSCEE----E----
T ss_pred CCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCCCccCCC-CCCceEEEECCceEEEECCCCCCCc----c----
Confidence 99999999999842 468999999999999999997666554 3343 4799999999999988532 1
Q ss_pred EEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChH
Q psy9583 778 IFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMAS 819 (866)
Q Consensus 778 ~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~ 819 (866)
+ .+|+|++++ +++|+|++++|+.+.
T Consensus 330 -~--------------~~~~k~~~~--~~~ilG~~~~g~~~~ 354 (367)
T 1xhc_A 330 -I--------------EDNTKVFYE--NGKIIGAVVFNDIRK 354 (367)
T ss_dssp -E--------------ETTEEEEC-------CEEEEESCHHH
T ss_pred -c--------------ceEEEEEEE--CCEEEEEEEECChHH
Confidence 1 578999997 489999999999743
No 53
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=9.8e-41 Score=378.84 Aligned_cols=380 Identities=18% Similarity=0.240 Sum_probs=283.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCC--eEEEEeccCC-CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGF--KTACIDEWKD-NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~--~V~liek~~~-~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
.+||+|||||+||++||..|++.|+ +|+|||+++. ||.+.. .++.++ .....
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~-----------l~~~~~--------------~~~~~ 58 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPP-----------LSKAYL--------------AGKAT 58 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGG-----------GGTTTT--------------TTCSC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCC-----------CcHHHh--------------CCCCC
Confidence 5899999999999999999999998 7999998731 111100 011000 00000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
... +......++++.+++++.++.+. ++. ..+.+.+ .++..+.||+||+|||+.|+
T Consensus 59 ~~~------------------~~~~~~~~~~~~gv~~~~~~~v~~i~~---~~~~v~~--~~g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 59 AES------------------LYLRTPDAYAAQNIQLLGGTQVTAINR---DRQQVIL--SDGRALDYDRLVLATGGRPR 115 (431)
T ss_dssp SGG------------------GBSSCHHHHHHTTEEEECSCCEEEEET---TTTEEEE--TTSCEEECSEEEECCCEEEC
T ss_pred hHH------------------hcccCHHHHHhCCCEEEeCCEEEEEEC---CCCEEEE--CCCCEEECCEEEEcCCCCcc
Confidence 000 00011234567899999987644 543 3345544 55678999999999999988
Q ss_pred CCCCCcCCCce---E---ecchhhhccc---cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-ccHHHHH
Q psy9583 546 SFPGVKFDENL---I---LSNKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-VDEEIAK 615 (866)
Q Consensus 546 ~~p~~~~~~~~---~---~t~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-~d~~~~~ 615 (866)
.++.++.+... + .+.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+
T Consensus 116 ~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~ 195 (431)
T 1q1r_A 116 PLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSA 195 (431)
T ss_dssp CCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHH
T ss_pred CCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHH
Confidence 76544332212 3 2455554443 35899999999999999999999999999999999999874 8999999
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEE--cCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCC
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKI--NKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNEN 692 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 692 (866)
.+.+.+++.||++++++.+++++. +++.+ .+.+. +|. .+++|.||+|+|++|++++ ++.+|++++ +
T Consensus 196 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~--~G~------~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~-~ 264 (431)
T 1q1r_A 196 FYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCE--DGT------RLPADLVIAGIGLIPNCEL--ASAAGLQVD-N 264 (431)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEET--TSC------EEECSEEEECCCEEECCHH--HHHTTCCBS-S
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeC--CCC------EEEcCEEEECCCCCcCcch--hhccCCCCC-C
Confidence 999999999999999999999987 44444 45443 665 7999999999999999986 678889886 5
Q ss_pred CcEEeCCCCCCCCCCEEEecccCCCC----------CcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE--EccCceeee
Q psy9583 693 NFIIVNDNCETNIPNIYAIGDVVRGP----------MLAHKAEEEGIMVAEHISGQKHSINFNALPFVI--YTFPEIASV 760 (866)
Q Consensus 693 G~i~Vd~~l~Ts~~~VyA~GD~a~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~v 760 (866)
| |.||+++||++|+|||+|||+..+ ..++.|..||++||.||+|... +|..+|+++ +.+.++.++
T Consensus 265 g-i~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~p~~~~~~~~~~~~~~ 341 (431)
T 1q1r_A 265 G-IVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP--RDEAAPWFWSDQYEIGLKMV 341 (431)
T ss_dssp S-EECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC--CCCCCCEEEEEETTEEEEEE
T ss_pred C-EEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC--CCCCCCeEEEEECCceEEEE
Confidence 6 999999999999999999999753 2578999999999999998764 356688764 345789999
Q ss_pred ecCHHHHHhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCCCHHHHcc
Q psy9583 761 GKTEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRASSEDIAR 840 (866)
Q Consensus 761 Gl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~~~~~l~~ 840 (866)
|+++.. .++.+ ... .+...|++++. ++++|+|++++|+.+.+++....++++.+++.++|.+
T Consensus 342 G~~~~~-----~~~~~-~~~----------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~~~l~~ 403 (431)
T 1q1r_A 342 GLSEGY-----DRIIV-RGS----------LAQPDFSVFYL--QGDRVLAVDTVNRPVEFNQSKQIITDRLPVEPNLLGD 403 (431)
T ss_dssp ECCTTC-----SEEEE-EEE----------TTTTEEEEEEE--ETTEEEEEEEESCHHHHHHHHHHHHTTCCCCHHHHTC
T ss_pred eCCCCC-----CEEEE-Ecc----------CCCCeEEEEEE--eCCEEEEEEEECChHHHHHHHHHHHCCCCCCHHHhhC
Confidence 998631 11211 110 12346776654 4799999999999999999999999999999999988
Q ss_pred ccccCCChh
Q psy9583 841 ICHVHPSLS 849 (866)
Q Consensus 841 ~~~~~Pt~~ 849 (866)
..+++..+.
T Consensus 404 ~~~~~~~~~ 412 (431)
T 1q1r_A 404 ESVPLKEII 412 (431)
T ss_dssp TTSCHHHHH
T ss_pred CCCCHHHHH
Confidence 877655543
No 54
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=8.4e-40 Score=368.68 Aligned_cols=364 Identities=19% Similarity=0.268 Sum_probs=270.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCC--eEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGF--KTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~--~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
++||+|||||+||++||..|++.|. +|+|||+++ .++ +..|..++.++.. .. .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~------~~~----~~~~~~~~~~~~~--------------~~-~ 61 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA------ERP----YDRPPLSKDFMAH--------------GD-A 61 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC------SCC----BCSGGGGTHHHHH--------------CC-G
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC------CCc----ccCCCCCHHHhCC--------------Cc-h
Confidence 5899999999999999999999997 499999973 221 0001111111100 00 0
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEE-EEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHA-IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~-v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.... +. ++++.+++++.++. ..++. ..+.+.+ .++..+.||+||+|||+.|..
T Consensus 62 ~~~~--------------------~~-~~~~~~v~~~~~~~v~~i~~---~~~~v~~--~~g~~~~~d~lviAtG~~~~~ 115 (408)
T 2gqw_A 62 EKIR--------------------LD-CKRAPEVEWLLGVTAQSFDP---QAHTVAL--SDGRTLPYGTLVLATGAAPRA 115 (408)
T ss_dssp GGSB--------------------CC-CTTSCSCEEEETCCEEEEET---TTTEEEE--TTSCEEECSEEEECCCEEECC
T ss_pred hhhh--------------------HH-HHHHCCCEEEcCCEEEEEEC---CCCEEEE--CCCCEEECCEEEECCCCCCCC
Confidence 0000 00 24567999999874 44554 3355554 456789999999999999887
Q ss_pred CCC-CcCCCceEe---cchhhhccc---cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHH
Q psy9583 547 FPG-VKFDENLIL---SNKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAF 618 (866)
Q Consensus 547 ~p~-~~~~~~~~~---t~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~ 618 (866)
|+. ++.+ ..++ +.+++..+. ..+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.
T Consensus 116 ~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~ 194 (408)
T 2gqw_A 116 LPTLQGAT-MPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVA 194 (408)
T ss_dssp CGGGTTCS-SCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHH
T ss_pred CCccCCCC-CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHH
Confidence 655 4433 3333 455554443 2479999999999999999999999999999999999998 58999999999
Q ss_pred HHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeC
Q psy9583 619 HLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVN 698 (866)
Q Consensus 619 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd 698 (866)
+.|++.||++++++.|++++ + + .+.+. +|. ++++|.|++|+|++|++++ ++.+|++++ +| |.||
T Consensus 195 ~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~--~g~------~i~~D~vi~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd 258 (408)
T 2gqw_A 195 RYHAAQGVDLRFERSVTGSV-D-G--VVLLD--DGT------RIAADMVVVGIGVLANDAL--ARAAGLACD-DG-IFVD 258 (408)
T ss_dssp HHHHHTTCEEEESCCEEEEE-T-T--EEEET--TSC------EEECSEEEECSCEEECCHH--HHHHTCCBS-SS-EECC
T ss_pred HHHHHcCcEEEeCCEEEEEE-C-C--EEEEC--CCC------EEEcCEEEECcCCCccHHH--HHhCCCCCC-CC-EEEC
Confidence 99999999999999999998 3 3 44443 665 8999999999999999987 678888886 56 9999
Q ss_pred CCCCCCCCCEEEecccCCCC----------CcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE--EccCceeeeecCHHH
Q psy9583 699 DNCETNIPNIYAIGDVVRGP----------MLAHKAEEEGIMVAEHISGQKHSINFNALPFVI--YTFPEIASVGKTEQY 766 (866)
Q Consensus 699 ~~l~Ts~~~VyA~GD~a~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vGl~e~~ 766 (866)
+++||++|+|||+|||+..+ .+++.|..||++||.||++.... +|..+|+++ +++++++++|+ +.
T Consensus 259 ~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~p~~~~~~~~~~~~~~G~-~~- 335 (408)
T 2gqw_A 259 AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAP-GYAELPWYWSDQGALRIQVAGL-AS- 335 (408)
T ss_dssp TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTSC-CCCCCCEEEEEETTEEEEEEEC-SC-
T ss_pred CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCCC-cCCCCCeEEEEECCceEEEECC-CC-
Confidence 99999999999999999753 26899999999999999987651 466688765 45689999998 22
Q ss_pred HHhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCC--CHHHHccc
Q psy9583 767 LKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRA--SSEDIARI 841 (866)
Q Consensus 767 a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~--~~~~l~~~ 841 (866)
..++.+ . .. ......+|++++++ +++|+|++++|+.+ .+..+..+|+++. +..+|.+.
T Consensus 336 ----~~~~~~-~---~~-----~~~~~~~~~~~~~~--~~~l~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~l~~~ 395 (408)
T 2gqw_A 336 ----GDEEIV-R---GE-----VSLDAPKFTLIELQ--KGRIVGATCVNNAR--DFAPLRRLLAVGAKPDRAALADP 395 (408)
T ss_dssp ----CSEEEE-E---SC-----CCSSSCCEEEEEEE--TTEEEEEEEESCHH--HHHHHHHHHHTTCCCCHHHHHCT
T ss_pred ----CCEEEE-E---cc-----CCCCCCeEEEEEEe--CCEEEEEEEECChH--HHHHHHHHHHCCCCCChHHhcCC
Confidence 111111 0 00 00114568888875 79999999999874 3578899999998 44555544
No 55
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3e-38 Score=357.36 Aligned_cols=371 Identities=20% Similarity=0.289 Sum_probs=273.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCe--EEEEeccCC-CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFK--TACIDEWKD-NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGI 465 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~--V~liek~~~-~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi 465 (866)
+++||+|||||+||++||.+|++.|++ |+|||+++. ||.++.+. +. +.....
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~-----------~~--------------~~~~~~ 62 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLS-----------KE--------------YLAREK 62 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGG-----------TT--------------TTTTSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCC-----------HH--------------HHcCCC
Confidence 358999999999999999999999987 999999732 11111110 00 000000
Q ss_pred cccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEE-EEeccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 466 NTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHA-IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~-v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
.... +......++++.+++++.++. ..++. ..+.+.+ .++..+.||+||+|||+.|
T Consensus 63 ~~~~------------------~~~~~~~~~~~~~i~~~~~~~v~~id~---~~~~v~~--~~g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 63 TFER------------------ICIRPAQFWEDKAVEMKLGAEVVSLDP---AAHTVKL--GDGSAIEYGKLIWATGGDP 119 (415)
T ss_dssp CSGG------------------GBSSCHHHHHHTTEEEEETCCEEEEET---TTTEEEE--TTSCEEEEEEEEECCCEEC
T ss_pred CHHH------------------hccCCHHHHHHCCcEEEeCCEEEEEEC---CCCEEEE--CCCCEEEeeEEEEccCCcc
Confidence 0000 001123456678999999844 44554 3344444 5677899999999999999
Q ss_pred cCCCCCcCCCceEe---cchhhhccc---cC-CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHH
Q psy9583 545 RSFPGVKFDENLIL---SNKGALEMI---NV-PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKK 616 (866)
Q Consensus 545 ~~~p~~~~~~~~~~---t~~~~~~~~---~~-~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~ 616 (866)
+.++.++.+...++ +.+++..+. .. +++++|||+|++|+|+|..+.+.|.+|+++++.+++++ .+++++.+.
T Consensus 120 ~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~ 199 (415)
T 3lxd_A 120 RRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEF 199 (415)
T ss_dssp CCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHH
T ss_pred CCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHH
Confidence 87765554434444 444444333 23 89999999999999999999999999999999999987 579999999
Q ss_pred HHHHHHHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 617 AFHLLNKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 617 l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
+.+.+++.||++++++.|+++..+++.+ .+.+. +|. ++++|.||+|+|++|++++ ++.+|++++ +| |
T Consensus 200 l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~--dG~------~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i 267 (415)
T 3lxd_A 200 YQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQ--DGS------VIPADIVIVGIGIVPCVGA--LISAGASGG-NG-V 267 (415)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEESSSBEEEEEES--SSC------EEECSEEEECSCCEESCHH--HHHTTCCCS-SS-E
T ss_pred HHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeC--CCC------EEEcCEEEECCCCccChHH--HHhCCCCcC-CC-E
Confidence 9999999999999999999999876554 45554 665 8999999999999999987 678889887 56 9
Q ss_pred EeCCCCCCCCCCEEEecccCCCCC-----------cHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE--EccCceeeeec
Q psy9583 696 IVNDNCETNIPNIYAIGDVVRGPM-----------LAHKAEEEGIMVAEHISGQKHSINFNALPFVI--YTFPEIASVGK 762 (866)
Q Consensus 696 ~Vd~~l~Ts~~~VyA~GD~a~~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vGl 762 (866)
.||++++|++|+|||+|||+..+. +++.|..||++||+||+|.... |..+|+++ +++..+..+|+
T Consensus 268 ~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~--~~~~p~~~~~~~~~~~~~~G~ 345 (415)
T 3lxd_A 268 DVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPVP--YKATPWFWSNQYDLKLQTVGL 345 (415)
T ss_dssp ECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCCC--CCCCCEEEEEETTEEEEEEEC
T ss_pred EECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCCC--CCCCCeeEeeeCCcEEEEEeC
Confidence 999999999999999999997543 4799999999999999998654 66777654 56788999998
Q ss_pred CHHHHHhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCC--CCHHHHcc
Q psy9583 763 TEQYLKKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFR--ASSEDIAR 840 (866)
Q Consensus 763 ~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~--~~~~~l~~ 840 (866)
++.. .++.+ ... .+...|.+++++ +++|+|+..+|.... ...+..+|..+ ++.++|++
T Consensus 346 ~~~~-----~~~~~-~~~----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 405 (415)
T 3lxd_A 346 STGH-----DNAVL-RGD----------PATRSFSVVYLK--GGKVVALDCVNMVKD--YVQGKKLVEARAQIAPEQLAD 405 (415)
T ss_dssp CTTC-----SEEEE-EEE----------GGGTEEEEEEEE--TTEEEEEEEESCHHH--HHHHHHHHHHTCCCCHHHHTC
T ss_pred CCCC-----CEEEE-Eec----------CCCCeEEEEEEE--CCEEEEEEEECChHH--HHHHHHHHHCCCCCCHHHhcC
Confidence 7431 11111 111 124578898885 689999999998632 33455566655 45566654
Q ss_pred c
Q psy9583 841 I 841 (866)
Q Consensus 841 ~ 841 (866)
.
T Consensus 406 ~ 406 (415)
T 3lxd_A 406 A 406 (415)
T ss_dssp T
T ss_pred C
Confidence 3
No 56
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=4.8e-39 Score=362.91 Aligned_cols=368 Identities=22% Similarity=0.280 Sum_probs=269.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCe--EEEEeccCC-CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFK--TACIDEWKD-NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~--V~liek~~~-~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||+|||||+||++||..|++.|++ |+|||+++. ||.++.+ ++.+ .......
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l-----------~~~~--------------~~g~~~~ 57 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSL-----------SKAV--------------LDGSLER 57 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGG-----------GTHH--------------HHTSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccc-----------cHHH--------------hCCCCCH
Confidence 6899999999999999999999987 999999732 1111100 0000 0000111
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEE-EEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHA-IFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~-v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
... .. ...++++.+++++.++. ..++. ..+.+.+ .++.++.||+||+|||+.|+.
T Consensus 58 ~~~-~~------------------~~~~~~~~~i~~~~~~~v~~id~---~~~~v~~--~~g~~~~~d~lvlAtG~~p~~ 113 (410)
T 3ef6_A 58 PPI-LA------------------EADWYGEARIDMLTGPEVTALDV---QTRTISL--DDGTTLSADAIVIATGSRART 113 (410)
T ss_dssp CCB-SS------------------CTTHHHHTTCEEEESCCEEEEET---TTTEEEE--TTSCEEECSEEEECCCEEECC
T ss_pred HHh-cC------------------CHHHHHHCCCEEEeCCEEEEEEC---CCCEEEE--CCCCEEECCEEEEccCCcccC
Confidence 000 00 12245668999999944 44554 3344444 567789999999999999987
Q ss_pred CCCCcCCCceEe---cchhhhccc---cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHHH
Q psy9583 547 FPGVKFDENLIL---SNKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAFH 619 (866)
Q Consensus 547 ~p~~~~~~~~~~---t~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~~ 619 (866)
|+.++.....++ +.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+
T Consensus 114 ~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~ 193 (410)
T 3ef6_A 114 MALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRG 193 (410)
T ss_dssp CCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHH
T ss_pred CCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHH
Confidence 755544433444 444444433 3479999999999999999999999999999999999986 589999999999
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
.+++.||++++++.|++++.++....+.+. +|+ ++++|.||+|+|++|++++ ++.+|++++ +| |.||+
T Consensus 194 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~--dg~------~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~vd~ 261 (410)
T 3ef6_A 194 LLTELGVQVELGTGVVGFSGEGQLEQVMAS--DGR------SFVADSALICVGAEPADQL--ARQAGLACD-RG-VIVDH 261 (410)
T ss_dssp HHHHHTCEEECSCCEEEEECSSSCCEEEET--TSC------EEECSEEEECSCEEECCHH--HHHTTCCBS-SS-EECCT
T ss_pred HHHHCCCEEEeCCEEEEEeccCcEEEEEEC--CCC------EEEcCEEEEeeCCeecHHH--HHhCCCccC-Ce-EEEcc
Confidence 999999999999999999876544345554 665 8999999999999999987 688899987 55 99999
Q ss_pred CCCCCCCCEEEecccCCCC---------CcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE--EccCceeeeecCHHHHH
Q psy9583 700 NCETNIPNIYAIGDVVRGP---------MLAHKAEEEGIMVAEHISGQKHSINFNALPFVI--YTFPEIASVGKTEQYLK 768 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vGl~e~~a~ 768 (866)
+++|++|+|||+|||+..+ ..++.|..||++||+||+|.... |..+|+++ +++..+..+|+++..
T Consensus 262 ~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~--~~~~p~~~~~~~~~~~~~~G~~~~~-- 337 (410)
T 3ef6_A 262 CGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNVS--APQLPVSWTEIAGHRMQMAGDIEGP-- 337 (410)
T ss_dssp TSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCCC--CCBCCEEEEEETTEEEEEESCSSSS--
T ss_pred CeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCCC--CCCCCeeEEEECCceEEEEcCCCCC--
Confidence 9999999999999999754 24899999999999999998644 56677654 567889999987541
Q ss_pred hcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCC--CCHHHHccc
Q psy9583 769 KHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFR--ASSEDIARI 841 (866)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~--~~~~~l~~~ 841 (866)
.++.+ . .+ .+...|.+++++ +++|+|++++|..... ..+..+|..+ ++.++|++.
T Consensus 338 ---~~~~~-~---~~-------~~~~~~~~~~~~--~~~l~g~~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~ 394 (410)
T 3ef6_A 338 ---GDFVS-R---GM-------PGSGAALLFRLQ--ERRIQAVVAVDAPRDF--ALATRLVEARAAIEPARLADL 394 (410)
T ss_dssp ---SEEEE-E---SC-------TTSSSEEEEEEE--TTEEEEEEEESCHHHH--HHHHHHHHHTCBCCHHHHHCT
T ss_pred ---CEEEE-E---ee-------CCCCeEEEEEEE--CCEEEEEEEECChHHH--HHHHHHHhCCCCCCHHHhcCC
Confidence 11111 0 00 123457777774 7899999999996333 3344555555 566677654
No 57
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.4e-37 Score=350.63 Aligned_cols=368 Identities=21% Similarity=0.287 Sum_probs=271.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCC--eEEEEeccCC-CcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGF--KTACIDEWKD-NEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~--~V~liek~~~-~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||+|||||+||++||.+|++.|+ +|+|||+++. ||.++.+ ++. +.......
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l-----------~~~--------------~l~~~~~~ 56 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPL-----------SKA--------------YLKSGGDP 56 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGG-----------GTG--------------GGGSCCCT
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccC-----------CHH--------------HHCCCCCH
Confidence 689999999999999999999998 8999999731 1111110 000 00000011
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
..... ....++.+.+++++......++. ..+.+.+ .++..+.||+||+|||+.|+.+
T Consensus 57 ~~~~~------------------~~~~~~~~~~i~~~~~~v~~id~---~~~~v~~--~~g~~~~~d~lvlAtG~~p~~~ 113 (404)
T 3fg2_P 57 NSLMF------------------RPEKFFQDQAIELISDRMVSIDR---EGRKLLL--ASGTAIEYGHLVLATGARNRML 113 (404)
T ss_dssp TSSBS------------------SCHHHHHHTTEEEECCCEEEEET---TTTEEEE--SSSCEEECSEEEECCCEEECCC
T ss_pred HHccC------------------CCHHHHHhCCCEEEEEEEEEEEC---CCCEEEE--CCCCEEECCEEEEeeCCCccCC
Confidence 00111 12334667899998854444554 3344444 5677899999999999998877
Q ss_pred CCCcCCCceEe---cchhhhccc---cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-cccHHHHHHHHHH
Q psy9583 548 PGVKFDENLIL---SNKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-TVDEEIAKKAFHL 620 (866)
Q Consensus 548 p~~~~~~~~~~---t~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-~~d~~~~~~l~~~ 620 (866)
+.++.+...++ +.++...+. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.
T Consensus 114 ~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~ 193 (404)
T 3fg2_P 114 DVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDR 193 (404)
T ss_dssp CSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHH
T ss_pred CCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHH
Confidence 65554444444 333433332 3579999999999999999999999999999999999987 5899999999999
Q ss_pred HHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 621 LNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 621 l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
+++.||++++++.|+++..+++.+. +.+. +|+ ++++|.||+|+|++|++++ ++.+|++++ +| |.||+
T Consensus 194 l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~--dG~------~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~G-i~vd~ 261 (404)
T 3fg2_P 194 HSGAGIRMHYGVRATEIAAEGDRVTGVVLS--DGN------TLPCDLVVVGVGVIPNVEI--AAAAGLPTA-AG-IIVDQ 261 (404)
T ss_dssp HHHTTCEEECSCCEEEEEEETTEEEEEEET--TSC------EEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EEECT
T ss_pred HHhCCcEEEECCEEEEEEecCCcEEEEEeC--CCC------EEEcCEEEECcCCccCHHH--HHhCCCCCC-CC-EEECC
Confidence 9999999999999999988765543 4443 665 8999999999999999987 678899887 56 99999
Q ss_pred CCCCCCCCEEEecccCCCCC----------cHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE--EccCceeeeecCHHHH
Q psy9583 700 NCETNIPNIYAIGDVVRGPM----------LAHKAEEEGIMVAEHISGQKHSINFNALPFVI--YTFPEIASVGKTEQYL 767 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vGl~e~~a 767 (866)
+++|++|+|||+|||+..+. .++.|..||++||+||+|.... |..+|+++ +++..+..+|++..
T Consensus 262 ~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~--~~~~p~~~~~~~~~~~~~~G~~~~-- 337 (404)
T 3fg2_P 262 QLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKP--YDGYPWFWSDQGDDKLQIVGLTAG-- 337 (404)
T ss_dssp TSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCCC--CCCCCEEEEEETTEEEEEEECCTT--
T ss_pred CcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCCC--CCCCCceEeEECCcEEEEEeCCCC--
Confidence 99999999999999997432 4899999999999999998644 66677654 66778999998742
Q ss_pred HhcCCcEEEEEEecCCchhhhhcCCceEEEEEEEECCCCcEEEEEEECCChHHHHHHHHHHHHCCC--CHHHHcc
Q psy9583 768 KKHNISYNVGIFPFLANSRARILGETSGMVKILSDMKSDEILGIHIIGPMASELIAEAVIAIEFRA--SSEDIAR 840 (866)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~eli~~~~~~i~~~~--~~~~l~~ 840 (866)
.+-.+.... .+...|.+++++ +++|+|+.++|.. .....+..+|..+. +.++|++
T Consensus 338 ----~~~~~~~~~----------~~~~~~~~~~~~--~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~ 394 (404)
T 3fg2_P 338 ----FDQVVIRGS----------VAERSFSAFCYK--AGKLIGIESVNRA--ADHVFGRKILPLDKSVTPEQAAD 394 (404)
T ss_dssp ----CCEEEEEEE----------TTTTEEEEEEEE--TTEEEEEEEESCH--HHHHHHHHHTTTTCCCCHHHHHC
T ss_pred ----CCEEEEEec----------CCCCcEEEEEEE--CCEEEEEEEeCCH--HHHHHHHHHHHcCCCCCHHHhcC
Confidence 111111111 134578999885 6899999999986 33445666776664 4455543
No 58
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=9.4e-40 Score=398.50 Aligned_cols=199 Identities=26% Similarity=0.407 Sum_probs=166.3
Q ss_pred HHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCC----eeEEccc
Q psy9583 185 RLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGN----NIIYHKY 260 (866)
Q Consensus 185 ~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~----~~~~~~~ 260 (866)
+|++|+ ++||+|++.++|+|+|+++|+++|+.+.+..|.|+|+++||+||+++||++||+||++|+++ .++++++
T Consensus 1 ~m~~S~-~~P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~ 79 (1113)
T 2xt6_A 1 GMNASL-EVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAH 79 (1113)
T ss_dssp -------CCCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSS
T ss_pred Chhhhc-cCCeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCc
Confidence 588896 79999999999999999999999987777778999999999999999999999999999854 7999999
Q ss_pred eeEEEEEecC--Cc---eEEeEEecCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCceEEEEcCCCcCccccccccCCC
Q psy9583 261 YDIGIAISSS--RG---LVVPILRNADTMSIADIEKKINEFINKAQDNKLLPEEMSGGTFTISNGGVFGSMLSTPIINPP 335 (866)
Q Consensus 261 ~~i~~av~~~--~g---l~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~gt~tisn~g~~g~~~~~~ii~~p 335 (866)
+||||||+++ +| |+|||||||+++|+.+|+++++++++++|+|+|+++|++||||||||+||+|+.+|+||||||
T Consensus 80 vnigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~~~d~~ggTftISNlG~~G~~~~tPIinpp 159 (1113)
T 2xt6_A 80 TNLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPGTLGTVHSVPRLMQG 159 (1113)
T ss_dssp CCEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCCGGGTSCCSEEEECC------------CTT
T ss_pred ccEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCEEEEeCCCcCCCcceECCCCCC
Confidence 9999999997 66 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeccceeeEEEeC------CeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 336 QSAILGVHAIKKRVIVEN------NNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 336 ~~~il~vg~~~~~~~~~~------~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+|||++|++.++|++.+ |+++++++|++++++|||++||+++++|+..
T Consensus 160 q~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~ 214 (1113)
T 2xt6_A 160 QGAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRT 214 (1113)
T ss_dssp CSEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred CceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHH
Confidence 999999999999998865 5799999999999999999999999877643
No 59
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4e-37 Score=334.66 Aligned_cols=292 Identities=22% Similarity=0.273 Sum_probs=212.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+||||||||++||.+|++.|++|+|||+. .+||+|.+.+|+|...- +.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-------~~gG~~~~~~~i~~~p~----------------~~----- 57 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-------IPGGQMANTEEVENFPG----------------FE----- 57 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------CTTGGGGGCSCBCCSTT----------------CS-----
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-------CCCCeeecccccCCcCC----------------cc-----
Confidence 599999999999999999999999999999984 78999999999864210 00
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
.....++..+ ......+.+..+..+....... ......+ ..++.++.||+||||||++|+.|+.
T Consensus 58 -~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~d~liiAtGs~~~~~~i 121 (312)
T 4gcm_A 58 -MITGPDLSTK-----------MFEHAKKFGAVYQYGDIKSVED---KGEYKVI-NFGNKELTAKAVIIATGAEYKKIGV 121 (312)
T ss_dssp -SBCHHHHHHH-----------HHHHHHHTTCEEEECCCCEEEE---CSSCEEE-ECSSCEEEEEEEEECCCEEECCCCC
T ss_pred -ccchHHHHHH-----------HHHHHhhccccccceeeeeeee---eecceee-ccCCeEEEeceeEEcccCccCcCCC
Confidence 0111122111 1223445566655554433211 1122222 2456789999999999999987755
Q ss_pred CcCCC---ceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 550 VKFDE---NLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 550 ~~~~~---~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
++... ..+............+++++|||||++|+|+|..|+++|.+||++++.+++++.... ..+.+++.++
T Consensus 122 pG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~-----~~~~~~~~~~ 196 (312)
T 4gcm_A 122 PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRIL-----QDRAFKNDKI 196 (312)
T ss_dssp TTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHH-----HHHHHHCTTE
T ss_pred CChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchhH-----HHHHHHhcCc
Confidence 54322 233333333333445799999999999999999999999999999999998764322 2456677888
Q ss_pred EEEeCceEEEEEEcCCeEEEE--EeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLIN--YSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~--~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
.+.....+..+...+...... ....++ ....+++|.|++++|++|+..+ ++..++.. ++|+|.||++||||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~v~~~~g~~~~~~~--~~~~g~~~-~~G~I~vd~~~~Ts 269 (312)
T 4gcm_A 197 DFIWSHTLKSINEKDGKVGSVTLTSTKDG----SEETHEADGVFIYIGMKPLTAP--FKDLGITN-DVGYIVTKDDMTTS 269 (312)
T ss_dssp EEECSEEEEEEEEETTEEEEEEEEETTTC----CEEEEECSEEEECSCEEESCGG--GGGGTCBC-TTSCBCCCTTSBCS
T ss_pred ceeeecceeeeeccccccccceeeeecCC----ceeEEeeeeEEeecCCCcCchh--HHhcceec-CCCeEeeCCCCccC
Confidence 888888877776655432211 111122 2458999999999999999987 56777764 58999999999999
Q ss_pred CCCEEEecccCC-CCCcHHHHHHHHHHHHHHHhC
Q psy9583 705 IPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 705 ~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g 737 (866)
+|||||+|||++ .+++++.|+.||++||.||..
T Consensus 270 ~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 270 VPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp STTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 999999999997 467999999999999999963
No 60
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.2e-36 Score=328.98 Aligned_cols=301 Identities=21% Similarity=0.295 Sum_probs=216.7
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|++.|||+||||||||++||.+|+++|++|+|||+. ..||.|.+ ||+|++.+... + .+++
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~-------~~gg~~~~-G~~~~~~~i~~----------~--~g~~ 60 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF-------MAGGVAAG-GQLTTTTIIEN----------F--PGFP 60 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-------SGGGCCTT-CGGGGSSEECC----------S--TTCT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-------CCCCcccC-CCcCChHHhhh----------c--cCCc
Confidence 666799999999999999999999999999999985 67888887 88886543211 0 0111
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..++..++..+ +...+++.++++.......... ....+.+.+.++.++.||+||||||+.|+.
T Consensus 61 ---~~i~~~~l~~~-----------~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 61 ---NGIDGNELMMN-----------MRTQSEKYGTTIITETIDHVDF---STQPFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp ---TCEEHHHHHHH-----------HHHHHHHTTCEEECCCEEEEEC---SSSSEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred ---ccCCHHHHHHH-----------HHHHHhhcCcEEEEeEEEEeec---CCCceEEEECCCeEEEEeEEEEcccccccc
Confidence 11233333322 3345667788887766555332 223344445667889999999999999987
Q ss_pred CCCCcCCC---ceEecchhhhcc--ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH
Q psy9583 547 FPGVKFDE---NLILSNKGALEM--INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621 (866)
Q Consensus 547 ~p~~~~~~---~~~~t~~~~~~~--~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l 621 (866)
|+.++.+. ..+......... ...+++++|||||++|+|+|..|+++|.+|++++|.+..... ++ ...+.+
T Consensus 124 ~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~--~~---~~~~~~ 198 (314)
T 4a5l_A 124 MHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRAS--KT---MQERVL 198 (314)
T ss_dssp CCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSC--HH---HHHHHH
T ss_pred cCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccccc--ch---hhhhhh
Confidence 66554221 222233222222 235799999999999999999999999999999998776542 22 234455
Q ss_pred HHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCC
Q psy9583 622 NKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDN 700 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~ 700 (866)
...++..+....+.++...+... .+.+.... ..+...+++|.|++|+|++||++++. .++.++++|.| ||++
T Consensus 199 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~i~~d~vi~a~G~~pn~~~l~---~~~~~~~~G~i-v~~~ 271 (314)
T 4a5l_A 199 NHPKIEVIWNSELVELEGDGDLLNGAKIHNLV---SGEYKVVPVAGLFYAIGHSPNSKFLG---GQVKTADDGYI-LTEG 271 (314)
T ss_dssp TCTTEEEECSEEEEEEEESSSSEEEEEEEETT---TCCEEEEECSEEEECSCEEESCGGGT---TSSCBCTTSCB-CCBT
T ss_pred cccceeeEeeeeeEEEEeeeeccceeEEeecc---cccceeeccccceEecccccChhHhc---ccceEcCCeeE-eCCC
Confidence 66788899999998888765432 23333211 11245899999999999999999853 35777878855 9999
Q ss_pred CCCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHHh
Q psy9583 701 CETNIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 701 l~Ts~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i~ 736 (866)
+|||+|||||+|||++.+ +++..|+.||+.||.++.
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999876 589999999999999874
No 61
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=4.6e-36 Score=302.75 Aligned_cols=181 Identities=9% Similarity=0.099 Sum_probs=160.2
Q ss_pred HHHHHHHHHHhccccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCCeeEEc
Q psy9583 179 RLCIAERLLQSQANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNNIIYH 258 (866)
Q Consensus 179 r~~ia~~m~~s~~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~ 258 (866)
||.--+.. ...++||+|++.++|+|+|+++|++. ++|+++|++||+++||++||+||++|++++++++
T Consensus 18 R~~~f~~f--~~~~~P~~t~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~ 85 (219)
T 1q23_A 18 RKEHFEAF--QSVAQCTYNQTVQLDITAFLKTVKKN----------KHKFYPAFIHILARLMNAHPEFRMAMKDGELVIW 85 (219)
T ss_dssp THHHHHHH--TTTTCEEEEEEEEEECHHHHHHHHHT----------TCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEE
T ss_pred CHHHHHHh--cCCCCcEEEEEEEEEhHHHHHHHHHc----------CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEe
Confidence 44444444 34578999999999999999998642 7999999999999999999999999999999999
Q ss_pred cceeEEEEE-ecCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcC-CCCc-cccCCceEEEEcCCCcCccccccccCCC
Q psy9583 259 KYYDIGIAI-SSSRGLVVPILRNADTMSIADIEKKINEFINKAQDN-KLLP-EEMSGGTFTISNGGVFGSMLSTPIINPP 335 (866)
Q Consensus 259 ~~~~i~~av-~~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~-~l~~-~~~~~gt~tisn~g~~g~~~~~~ii~~p 335 (866)
+++|||+|| ++++||++||++. ..+++.+|+++++++++++|+| +|.+ +|+ ||||||||+||+ .|+|++|+|
T Consensus 86 ~~v~igiAV~~t~~GL~~pvi~~-~~~~l~~i~~~~~~l~~~ar~~~kL~~~~~~-ggtftISnlG~~---~ft~i~~~~ 160 (219)
T 1q23_A 86 DSVHPCYTVFHEQTETFSSLWSE-YHDDFRQFLHIYSQDVACYGENLAYFPKGFI-ENMFFVSANPWV---SFTSFDLNV 160 (219)
T ss_dssp SCCEEEEEEEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTCCC-SSEEEEEECTTC---CCSEEEEEE
T ss_pred cccCeEEEEEecCCcEEEEEEec-CCCCHHHHHHHHHHHHHHHHccCCCCCcccc-CCEEEEEcCccc---cccccccCC
Confidence 999999999 9999999999996 5689999999999999999998 6975 889 999999999998 566777666
Q ss_pred c------eEEEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 336 Q------SAILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 336 ~------~~il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
+ ++||++|++.++ ++ |++|++++++|||++||.++++|...
T Consensus 161 ~~~~~~~~pIi~~G~~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~ 207 (219)
T 1q23_A 161 ANMDNFFAPVFTMGKYYTQ----GD----KVLMPLAIQVHHAVCDGFHVGRMLNE 207 (219)
T ss_dssp SCCTTCCSCEEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred CCCccceeEEEecccEEEE----CC----cEEEEEEEEEEchhhChHHHHHHHHH
Confidence 5 599999999875 32 79999999999999999999988754
No 62
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=7e-36 Score=344.48 Aligned_cols=328 Identities=17% Similarity=0.226 Sum_probs=227.2
Q ss_pred cccccceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYG 464 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~g 464 (866)
|..++||+|||||+||++||..|++. |.+|+|||+++ .++ +..|.+++.++....... .......+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~------~~~----y~r~~lsk~l~~~~~~~~--~~~~~~~~ 75 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP------ELP----YMRPPLSKELWFSDDPNV--TKTLRFKQ 75 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS------SCC----BCSGGGGTGGGCC--CTH--HHHCEEEC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC------CCC----CCCCCCCHHhhcCCccch--hhcccccc
Confidence 33468999999999999999999887 89999999973 222 112334554443221100 00000011
Q ss_pred ccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCC
Q psy9583 465 INTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSK 543 (866)
Q Consensus 465 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~ 543 (866)
++.....+.+.....+. .. ..+ ..+.+.+++++.++.+. ++. ..+.+.+ .+|.++.||+||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~-----~~-~~l-~~~~~~gv~~~~g~~v~~id~---~~~~V~~--~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 76 WNGKERSIYFQPPSFYV-----SA-QDL-PHIENGGVAVLTGKKVVQLDV---RDNMVKL--NDGSQITYEKCLIATGGT 143 (493)
T ss_dssp TTSCEEESBSSCGGGSB-----CT-TTT-TTSTTCEEEEEETCCEEEEEG---GGTEEEE--TTSCEEEEEEEEECCCEE
T ss_pred cccccccccccchHhhc-----ch-hhh-hhhhcCCeEEEcCCEEEEEEC---CCCEEEE--CCCCEEECCEEEECCCCC
Confidence 11000000000000000 00 000 00235689999986555 544 3355554 567789999999999999
Q ss_pred CcCCCCCcCC------CceE-ecchhhhccc---cCCCeEEEECCcHHHHHHHHHHHh----cCCcEEEEecCCcCCC-c
Q psy9583 544 ARSFPGVKFD------ENLI-LSNKGALEMI---NVPKKLCIIGAGVIGLEIGSIWRR----LGSEVTILEMSSNFLN-T 608 (866)
Q Consensus 544 p~~~p~~~~~------~~~~-~t~~~~~~~~---~~~~~vvVIGgG~~glE~A~~l~~----~g~~Vtli~~~~~~l~-~ 608 (866)
|+.+|.++.. ..+. .+.+++..+. ..+++++|||||++|+|+|..|.+ .|.+|+++++.+.++. .
T Consensus 144 p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~ 223 (493)
T 1m6i_A 144 PRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI 223 (493)
T ss_dssp ECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT
T ss_pred CCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc
Confidence 9876543311 1111 2444444333 248999999999999999999987 5789999999887664 5
Q ss_pred ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCee
Q psy9583 609 VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLK 688 (866)
Q Consensus 609 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~ 688 (866)
+++++.+.+.+.++++||++++++.|++++.+++.+.+.+. +|. ++++|.||+|+|++||+++ ++.+|++
T Consensus 224 l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~--dG~------~i~aD~Vv~a~G~~pn~~l--~~~~gl~ 293 (493)
T 1m6i_A 224 LPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLK--DGR------KVETDHIVAAVGLEPNVEL--AKTGGLE 293 (493)
T ss_dssp SCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEET--TSC------EEEESEEEECCCEEECCTT--HHHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEEC--CCC------EEECCEEEECCCCCccHHH--HHHcCCc
Confidence 78899999999999999999999999999876666655554 665 8999999999999999987 6788898
Q ss_pred ecC-CCcEEeCCCCCCCCCCEEEecccCCCC---------CcHHHHHHHHHHHHHHHhCCCCCCCCCCccEEE
Q psy9583 689 VNE-NNFIIVNDNCETNIPNIYAIGDVVRGP---------MLAHKAEEEGIMVAEHISGQKHSINFNALPFVI 751 (866)
Q Consensus 689 ~~~-~G~i~Vd~~l~Ts~~~VyA~GD~a~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~ 751 (866)
+++ +|+|.||++||| .|+|||+|||+..+ ..+..|..||++||.||+|...+ |...|+++
T Consensus 294 ~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~~--~~~~~~~~ 363 (493)
T 1m6i_A 294 IDSDFGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKP--YWHQSMFW 363 (493)
T ss_dssp BCTTTCSEECCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCCCC--CCCCCEEE
T ss_pred cccCCCcEEECCCccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCCCC--cCCcCcee
Confidence 885 578999999998 69999999999632 25779999999999999997655 44556544
No 63
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3.5e-34 Score=313.23 Aligned_cols=299 Identities=19% Similarity=0.228 Sum_probs=216.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|.+++||+|||||+||+++|..|++.|++|+|||+. .+||.|.+..++... . +++
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-------~~gg~~~~~~~~~~~----------------~--~~~ 59 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-------MPGGQIAWSEEVENF----------------P--GFP 59 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------CTTGGGGGCSCBCCS----------------T--TCS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-------CCCcccccccccccC----------------C--CCC
Confidence 334689999999999999999999999999999995 578888654432110 0 111
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..++...+.. .+...+++.+++++.+....++........+.+.+.++..+.||+||+|||+.|..
T Consensus 60 ---~~~~~~~~~~-----------~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 60 ---EPIAGMELAQ-----------RMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp ---SCBCHHHHHH-----------HHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred ---CCCCHHHHHH-----------HHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 0112222222 23445677899998865554543100111134444456789999999999998876
Q ss_pred CCCCcCCC---ceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHH-
Q psy9583 547 FPGVKFDE---NLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN- 622 (866)
Q Consensus 547 ~p~~~~~~---~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~- 622 (866)
++.++... ..++...........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++. +.+.+.
T Consensus 126 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~~----~~~~l~~ 199 (325)
T 2q7v_A 126 LGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA--NKV----AQARAFA 199 (325)
T ss_dssp CCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS--CHH----HHHHHHT
T ss_pred CCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc--chH----HHHHHHh
Confidence 64443221 23333333333334579999999999999999999999999999999887643 333 233444
Q ss_pred HcCCEEEeCceEEEEEEcCCeEEEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 623 KQGLNIILNTKIHDIKINKENVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 623 ~~GV~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
+.||+++++++++++..++....+.+.. .+|+ ..++++|.|++|+|++|+.+++ +.. ++++++|+|.||+++
T Consensus 200 ~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~l--~~~-~~~~~~g~i~vd~~~ 272 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGE----VSELATDGVFIFIGHVPNTAFV--KDT-VSLRDDGYVDVRDEI 272 (325)
T ss_dssp CTTEEEECSEEEEEEEESSSEEEEEEEETTTCC----EEEEECSEEEECSCEEESCGGG--TTT-SCBCTTSCBCCBTTT
T ss_pred cCCceEecCCceEEEccCCcEEEEEEEECCCCc----EEEEEcCEEEEccCCCCChHHH--hhh-cccCCCccEecCCCC
Confidence 4699999999999998764333455543 2343 3478999999999999999874 555 778888999999999
Q ss_pred CCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 702 ETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
+|++|+|||+|||++. +++++.|..||++||.||..
T Consensus 273 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 273 YTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp BCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 68999999999999999975
No 64
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=4.7e-34 Score=310.16 Aligned_cols=293 Identities=17% Similarity=0.195 Sum_probs=217.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCC-eEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGF-KTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~-~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
|||+|||||+||+++|..|++.|+ +|+|||+. .+||.|.+..+.... . +++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-------~~gg~~~~~~~~~~~----------------~--~~~--- 53 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-------MPGGQITGSSEIENY----------------P--GVK--- 53 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-------STTCGGGGCSCBCCS----------------T--TCC---
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-------CCCcccccccccccC----------------C--CCc---
Confidence 799999999999999999999999 99999984 678888655432210 0 111
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
..++...+..+ +...+++.+++++......++. ..+.+.+...++..+.||+||+|||+.|..++.
T Consensus 54 ~~~~~~~~~~~-----------l~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~ 119 (311)
T 2q0l_A 54 EVVSGLDFMQP-----------WQEQCFRFGLKHEMTAVQRVSK---KDSHFVILAEDGKTFEAKSVIIATGGSPKRTGI 119 (311)
T ss_dssp SCBCHHHHHHH-----------HHHHHHTTSCEEECSCEEEEEE---ETTEEEEEETTSCEEEEEEEEECCCEEECCCCC
T ss_pred ccCCHHHHHHH-----------HHHHHHHcCCEEEEEEEEEEEE---cCCEEEEEEcCCCEEECCEEEECCCCCCCCCCC
Confidence 11222222222 3345667799988755444433 224455655566789999999999998876654
Q ss_pred CcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHH-HcC
Q psy9583 550 VKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLN-KQG 625 (866)
Q Consensus 550 ~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~-~~G 625 (866)
++.. +..+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .+++ +.+.+. +.|
T Consensus 120 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~----~~~~l~~~~g 193 (311)
T 2q0l_A 120 KGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAPI----TLEHAKNNDK 193 (311)
T ss_dssp BTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCHH----HHHHHHTCTT
T ss_pred CChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCHH----HHHHHhhCCC
Confidence 4321 12344333333334457999999999999999999999999999999988764 3443 334454 479
Q ss_pred CEEEeCceEEEEEEcCCeE-EEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCcccc----CeeecCCCcEEeCC
Q psy9583 626 LNIILNTKIHDIKINKENV-LINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKI----GLKVNENNFIIVND 699 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~-~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~----gl~~~~~G~i~Vd~ 699 (866)
|++++++.++++..+++++ .+.+.. .+|. ..++++|.|++|+|++|+++++ +.. +++++++|+|.||+
T Consensus 194 v~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~l--~~~g~~~~l~~~~~g~i~vd~ 267 (311)
T 2q0l_A 194 IEFLTPYVVEEIKGDASGVSSLSIKNTATNE----KRELVVPGFFIFVGYDVNNAVL--KQEDNSMLCKCDEYGSIVVDF 267 (311)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEEETTTCC----EEEEECSEEEECSCEEECCGGG--BCTTSCBSSCBCTTSCBCCCT
T ss_pred eEEEeCCEEEEEECCCCcEeEEEEEecCCCc----eEEEecCEEEEEecCccChhhh--hcccccceeEeccCCCEEeCC
Confidence 9999999999998775543 455542 1343 3478999999999999999874 555 38888889999999
Q ss_pred CCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 700 NCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
++||++|+|||+|||++. +++++.|..||++||.||..
T Consensus 268 ~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 268 SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVIS 306 (311)
T ss_dssp TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999986 68999999999999999864
No 65
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.8e-34 Score=309.66 Aligned_cols=295 Identities=21% Similarity=0.302 Sum_probs=217.3
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|..++||+|||||+||+++|..|++.|++|+|||+. .+||.|.+..++... . ++
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-------~~gg~~~~~~~~~~~----------------~--~~- 66 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-------VAGGLTAEAPLVENY----------------L--GF- 66 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-------STTGGGGGCSCBCCB----------------T--TB-
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-------CCCccccccchhhhc----------------C--CC-
Confidence 444699999999999999999999999999999984 578887654332110 0 00
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
...+...+.. .+...+++.+++++.+....++. ..+.+.+.+ ++..+.||+||+|||+.|..
T Consensus 67 ---~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 67 ---KSIVGSELAK-----------LFADHAANYAKIREGVEVRSIKK---TQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp ---SSBCHHHHHH-----------HHHHHHHTTSEEEETCCEEEEEE---ETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred ---cccCHHHHHH-----------HHHHHHHHcCCEEEEeeEEEEEE---eCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 0111222211 23445667799988765544433 224455554 34679999999999998876
Q ss_pred CCCCcCCC---ceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 547 FPGVKFDE---NLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 547 ~p~~~~~~---~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
++..+... ..+............+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++ .+.+.+++
T Consensus 129 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--~~----~l~~~l~~ 202 (319)
T 3cty_A 129 LGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--EN----AYVQEIKK 202 (319)
T ss_dssp CCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--CH----HHHHHHHH
T ss_pred CCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--CH----HHHHHHhc
Confidence 65433221 22333322222334579999999999999999999999999999999887643 33 34556678
Q ss_pred cCCEEEeCceEEEEEEcCCe-EEEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 624 QGLNIILNTKIHDIKINKEN-VLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~-~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
.||+++++++++++..+++. ..+.+.. .+|. ..++++|.|++|+|++|+.++ ++..|++++++|+|.||+++
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~ 276 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGE----EKLIETDGVFIYVGLIPQTSF--LKDSGVKLDERGYIVVDSRQ 276 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCC----EEEECCSEEEECCCEEECCGG--GTTSCCCBCTTSCBCCCTTC
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCc----eEEEecCEEEEeeCCccChHH--HhhccccccCCccEeCCCCC
Confidence 99999999999999887542 2355542 2343 347999999999999999988 46778999888999999999
Q ss_pred CCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 702 ETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
+|++|+|||+|||++. +++++.|+.||++||.||..
T Consensus 277 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 277 RTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp BCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 57999999999999999964
No 66
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=7.2e-35 Score=293.08 Aligned_cols=175 Identities=10% Similarity=0.112 Sum_probs=155.3
Q ss_pred cccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEeCCeeEEccceeEEEEE-ec
Q psy9583 191 ANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVDGNNIIYHKYYDIGIAI-SS 269 (866)
Q Consensus 191 ~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~~~~~~~~~~~~i~~av-~~ 269 (866)
.++||+|++.++|+|+|+++|++ .++|+++|++||+++||++||+||++|+++++++++++|||+|| ++
T Consensus 23 ~~~P~~~~~~evDvt~l~~~rk~----------~~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 23 RLPCGFSLTSKIDITTLKKSLDD----------SAYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp TSCCEEEEEEEEECHHHHHHHHT----------SSCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred CCCceEEEEEEEEHHHHHHHHHH----------hCCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 46899999999999999999853 28999999999999999999999999999999999999999999 99
Q ss_pred CCceEEeEEecCCCCCHHHHHHHHHHHHHHHhcC-CCCc-cccCCceEEEEcCCCcCccccccccCCC---ceEEEEecc
Q psy9583 270 SRGLVVPILRNADTMSIADIEKKINEFINKAQDN-KLLP-EEMSGGTFTISNGGVFGSMLSTPIINPP---QSAILGVHA 344 (866)
Q Consensus 270 ~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~~-~l~~-~~~~~gt~tisn~g~~g~~~~~~ii~~p---~~~il~vg~ 344 (866)
++||++||+++ +.+++.+|+++++++++++|+| +|.+ +|++||||||||+||++.+.++..++++ .++|+++|+
T Consensus 93 ~~GL~vpvi~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~ggtftISnlg~~~ft~i~~~~~~g~~~~~PIi~~G~ 171 (213)
T 3cla_A 93 ETETFSALSCP-YSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDYFAPIITMAK 171 (213)
T ss_dssp TTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETTCCCSCCCCCCSCCTTCCSCEEEEEC
T ss_pred CCceEEEEEec-CCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEEcCCCCCcccccccCCCCCcccccEEEeeE
Confidence 99999999987 5689999999999999999996 9988 8899999999999998655443333333 258999999
Q ss_pred ceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 345 IKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 345 ~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
+.++ ++ +++|++++++|||++||.++++|...
T Consensus 172 ~~~~----~~----~~~m~lsls~DHRvvDG~~aa~Fl~~ 203 (213)
T 3cla_A 172 YQQE----GD----RLLLPLSVQVHHAVCDGFHVARFINR 203 (213)
T ss_dssp CEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEEE----CC----eEEEEEEEEEcccccChHHHHHHHHH
Confidence 9865 33 79999999999999999999988754
No 67
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=5.1e-34 Score=311.21 Aligned_cols=293 Identities=22% Similarity=0.272 Sum_probs=219.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||+||+++|..|++.|++|+|||+ . +||.|.+.+.... ++..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-------~-~gg~~~~~~~~~~---------------------~~~~- 64 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGE-------T-PGGQLTEAGIVDD---------------------YLGL- 64 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-------S-TTGGGGGCCEECC---------------------STTS-
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEec-------c-CCCeecccccccc---------------------cCCC-
Confidence 48999999999999999999999999999998 3 7887755322110 0000
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
.......+. ..+...+++.+++++......++. ..+.+.+.+.++..+.||+||+|||+.|..++.
T Consensus 65 ~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i 130 (323)
T 3f8d_A 65 IEIQASDMI-----------KVFNKHIEKYEVPVLLDIVEKIEN---RGDEFVVKTKRKGEFKADSVILGIGVKRRKLGV 130 (323)
T ss_dssp TTEEHHHHH-----------HHHHHHHHTTTCCEEESCEEEEEE---C--CEEEEESSSCEEEEEEEEECCCCEECCCCC
T ss_pred CCCCHHHHH-----------HHHHHHHHHcCCEEEEEEEEEEEe---cCCEEEEEECCCCEEEcCEEEECcCCCCccCCC
Confidence 001112222 123455677899988855444443 334566666667789999999999999876644
Q ss_pred CcCCC---ceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 550 VKFDE---NLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 550 ~~~~~---~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
.+... ..+............+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++ ++++ +.+.+++.||
T Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~~---~~~~~~~~gv 205 (323)
T 3f8d_A 131 PGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--QPIY---VETVKKKPNV 205 (323)
T ss_dssp TTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--CHHH---HHHHHTCTTE
T ss_pred CchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHHH---HHHHHhCCCc
Confidence 43322 33333333333334579999999999999999999999999999999998876 3322 2333344599
Q ss_pred EEEeCceEEEEEEcCCeEEEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNI 705 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~ 705 (866)
++++++.++++..++....+.+.+ .+|+ ...+++|.|++|+|++|+.++ ++.++++++++|+|.||++++|++
T Consensus 206 ~~~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~~~~D~vv~a~G~~p~~~~--~~~~g~~~~~~g~i~vd~~~~t~~ 279 (323)
T 3f8d_A 206 EFVLNSVVKEIKGDKVVKQVVVENLKTGE----IKELNVNGVFIEIGFDPPTDF--AKSNGIETDTNGYIKVDEWMRTSV 279 (323)
T ss_dssp EEECSEEEEEEEESSSEEEEEEEETTTCC----EEEEECSEEEECCCEECCHHH--HHHTTCCBCTTSSBCCCTTCBCSS
T ss_pred EEEeCCEEEEEeccCceeEEEEEECCCCc----eEEEEcCEEEEEECCCCChhH--HhhcCeeecCCCcEecCCCceecC
Confidence 999999999999876555566653 2243 347999999999999999887 678899999999999999999999
Q ss_pred CCEEEecccCCC---CCcHHHHHHHHHHHHHHHhC
Q psy9583 706 PNIYAIGDVVRG---PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 706 ~~VyA~GD~a~~---~~~~~~A~~~g~~aa~~i~g 737 (866)
|||||+|||++. +++++.|+.||+.||.||+.
T Consensus 280 ~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 280 PGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp TTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEcceecCCCCcccceeehhhHHHHHHHHHHH
Confidence 999999999985 78999999999999999964
No 68
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1e-33 Score=307.77 Aligned_cols=296 Identities=18% Similarity=0.194 Sum_probs=221.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEE-EeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTAC-IDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~l-iek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++||+|||||+||++||..|++.|++|+| ||+. .+||.|.+..+++... +.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-------~~gG~~~~~~~~~~~~------------------~~~-- 56 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-------MPGGQITSSSEIENYP------------------GVA-- 56 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-------STTGGGGGCSCBCCST------------------TCC--
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-------CCCceeeeeceeccCC------------------CCC--
Confidence 58999999999999999999999999999 9984 6788876554332110 000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEE--EEcCCceEEEecEEEEecCCCCcC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQ--IINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~--v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.......+..+ +...+++.+++++.+....+ . +.....+. +.++ + .+.||+||+|||+.|..
T Consensus 57 -~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i-~-~~~~~~~~v~~~~~-~-~~~~d~lvlAtG~~~~~ 120 (315)
T 3r9u_A 57 -QVMDGISFMAP-----------WSEQCMRFGLKHEMVGVEQI-L-KNSDGSFTIKLEGG-K-TELAKAVIVCTGSAPKK 120 (315)
T ss_dssp -SCBCHHHHHHH-----------HHHHHTTTCCEEECCCEEEE-E-ECTTSCEEEEETTS-C-EEEEEEEEECCCEEECC
T ss_pred -CCCCHHHHHHH-----------HHHHHHHcCcEEEEEEEEEE-e-cCCCCcEEEEEecC-C-EEEeCEEEEeeCCCCCC
Confidence 11222222222 34556778999988855555 2 11113455 5443 3 89999999999998876
Q ss_pred CCCCcCCC---ceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH
Q psy9583 547 FPGVKFDE---NLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK 623 (866)
Q Consensus 547 ~p~~~~~~---~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~ 623 (866)
++.++... ..+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. +++ .+.+.+++
T Consensus 121 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~---~~~~~~~~ 195 (315)
T 3r9u_A 121 AGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA--APS---TVEKVKKN 195 (315)
T ss_dssp CCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS--CHH---HHHHHHHC
T ss_pred CCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC--CHH---HHHHHHhc
Confidence 65444332 34555544444455689999999999999999999999999999999988732 333 33455578
Q ss_pred cCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCc-cccC-eeecCCCcEEeCCC
Q psy9583 624 QGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNI-DKIG-LKVNENNFIIVNDN 700 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l-~~~g-l~~~~~G~i~Vd~~ 700 (866)
.||++++++.+.++..+++.+ .+.+...+|+ ..++++|.|++|+|++|+..++.. +.+| ++++++|+|.||++
T Consensus 196 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~----~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~ 271 (315)
T 3r9u_A 196 EKIELITSASVDEVYGDKMGVAGVKVKLKDGS----IRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLK 271 (315)
T ss_dssp TTEEEECSCEEEEEEEETTEEEEEEEECTTSC----EEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTT
T ss_pred CCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCC----eEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCC
Confidence 899999999999998876543 2555433453 357999999999999999988543 3465 99998899999999
Q ss_pred CCCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHHhC
Q psy9583 701 CETNIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 701 l~Ts~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~g 737 (866)
+||++|+|||+|||++ .++.+..|+.||+.||.+|..
T Consensus 272 ~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 272 MQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp CBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHH
Confidence 9999999999999986 578999999999999999863
No 69
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.2e-34 Score=313.27 Aligned_cols=301 Identities=19% Similarity=0.256 Sum_probs=220.8
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
++++||+|||||+||+++|..|++.|++|+|||+. +.+||.|.+. .|++.+.. ..+++
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~------~~~gg~~~~~--~~~~~~~~-------------~~~~~- 60 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPL------PEPGGQLTAL--YPEKYIYD-------------VAGFP- 60 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------SSSCHHHHHT--CTTSEECC-------------STTCS-
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC------CCCCCeeecc--CCCceeec-------------cCCCC-
Confidence 34689999999999999999999999999999997 6788877432 23221100 00000
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCC---
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSK--- 543 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~--- 543 (866)
......+.. .+...+++.+++++.+..+. ++. ....+.+.+.++..+.||+||+|||+.
T Consensus 61 ---~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~v~~i~~---~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 123 (335)
T 2zbw_A 61 ---KVYAKDLVK-----------GLVEQVAPFNPVYSLGERAETLER---EGDLFKVTTSQGNAYTAKAVIIAAGVGAFE 123 (335)
T ss_dssp ---SEEHHHHHH-----------HHHHHHGGGCCEEEESCCEEEEEE---ETTEEEEEETTSCEEEEEEEEECCTTSEEE
T ss_pred ---CCCHHHHHH-----------HHHHHHHHcCCEEEeCCEEEEEEE---CCCEEEEEECCCCEEEeCEEEECCCCCCCC
Confidence 112222221 23344566788887765544 332 223566766667789999999999994
Q ss_pred CcCCCCCcCC---CceEec-chhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHH
Q psy9583 544 ARSFPGVKFD---ENLILS-NKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFH 619 (866)
Q Consensus 544 p~~~p~~~~~---~~~~~t-~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~ 619 (866)
|..++..+.. ...++. ..+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .++..+.+.+
T Consensus 124 p~~~~i~g~~~~~~~~~~~~~~~~~--~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--~~~~~~~l~~ 199 (335)
T 2zbw_A 124 PRRIGAPGEREFEGRGVYYAVKSKA--EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--HEASVKELMK 199 (335)
T ss_dssp ECCCCCTTTTTTBTTTEESSCSCGG--GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--CHHHHHHHHH
T ss_pred CCCCCCCChhhccCcEEEEecCchh--hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--cHHHHHHHHh
Confidence 5544333221 111221 11111 12479999999999999999999999999999999988765 3567788889
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeC
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVN 698 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd 698 (866)
.+++.||++++++.+.++..++....+.+... +|. ..++++|.|++|+|++|+.++ ++.++++++ +|+|.||
T Consensus 200 ~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd 272 (335)
T 2zbw_A 200 AHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQE----ELALEVDAVLILAGYITKLGP--LANWGLALE-KNKIKVD 272 (335)
T ss_dssp HHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCC----EEEEECSEEEECCCEEEECGG--GGGSCCCEE-TTEEECC
T ss_pred ccccCCeEEecCCcceeEccCCCeeEEEEEECCCCc----eEEEecCEEEEeecCCCCchH--hhhcceecc-CCeeeeC
Confidence 99999999999999999998544334555432 342 347999999999999999887 577888887 7889999
Q ss_pred CCCCCCCCCEEEecccCC---CCCcHHHHHHHHHHHHHHHhCC
Q psy9583 699 DNCETNIPNIYAIGDVVR---GPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 699 ~~l~Ts~~~VyA~GD~a~---~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
+++||++|+|||+|||+. .+++++.|+.||++||+||++.
T Consensus 273 ~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 315 (335)
T 2zbw_A 273 TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAY 315 (335)
T ss_dssp TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999995 4579999999999999999753
No 70
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.5e-33 Score=306.00 Aligned_cols=294 Identities=24% Similarity=0.319 Sum_probs=216.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+|||+|||||+||+++|..|++.|++|+|||+ .+||.|....+++.. . +.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--------~~gG~~~~~~~~~~~----------------~--~~---- 50 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--------RFGGQILDTVDIENY----------------I--SV---- 50 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--------STTGGGGGCCEECCB----------------T--TB----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--------CCCceeccccccccc----------------c--Cc----
Confidence 38999999999999999999999999999975 468887543322210 0 00
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEe-EEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHG-HAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g-~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
...+...+ ...+...+++.+++++.+ ....++........+.+..+++..+.||+||+|||+.|..|+
T Consensus 51 ~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~ 119 (310)
T 1fl2_A 51 PKTEGQKL-----------AGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMN 119 (310)
T ss_dssp SSEEHHHH-----------HHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCC
T ss_pred CCCCHHHH-----------HHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCC
Confidence 00111121 122445567789999998 444454311112245665566778999999999999887654
Q ss_pred CCcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH-c
Q psy9583 549 GVKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK-Q 624 (866)
Q Consensus 549 ~~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~-~ 624 (866)
.++.. ...++...........+++++|||+|++|+|+|..|++.|.+|+++++.+.+. +++ .+.+.|++ .
T Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~----~~~~~l~~~~ 193 (310)
T 1fl2_A 120 VPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--ADQ----VLQDKLRSLK 193 (310)
T ss_dssp CTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SCH----HHHHHHHTCT
T ss_pred CCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--ccH----HHHHHHhhCC
Confidence 43322 22344443333333457999999999999999999999999999999998773 343 34556676 6
Q ss_pred CCEEEeCceEEEEEEcCCeE-EEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENV-LINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE 702 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~-~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~ 702 (866)
||++++++.++++..+++.+ .+.+.+ .+|+ ..++++|.|++|+|++||++++ ++. ++++++|+|.||+++|
T Consensus 194 gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~l--~~~-l~~~~~g~i~vd~~~~ 266 (310)
T 1fl2_A 194 NVDIILNAQTTEVKGDGSKVVGLEYRDRVSGD----IHNIELAGIFVQIGLLPNTNWL--EGA-VERNRMGEIIIDAKCE 266 (310)
T ss_dssp TEEEESSEEEEEEEESSSSEEEEEEEETTTCC----EEEEECSEEEECSCEEESCGGG--TTT-SCBCTTSCBCCCTTCB
T ss_pred CeEEecCCceEEEEcCCCcEEEEEEEECCCCc----EEEEEcCEEEEeeCCccCchHH--hcc-ccccCCCcEEcCCCCc
Confidence 99999999999998765544 455553 2232 3578999999999999999874 443 7788889999999999
Q ss_pred CCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHHhC
Q psy9583 703 TNIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 703 Ts~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i~g 737 (866)
|++|+|||+|||++.+ +.+..|+.||+.||.+|..
T Consensus 267 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 267 TNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp CSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHH
Confidence 9999999999999865 6899999999999999964
No 71
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.4e-33 Score=307.80 Aligned_cols=295 Identities=21% Similarity=0.290 Sum_probs=220.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||+||+++|..|++.|++|+|||+. .+||.|.+...... +. +++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-------~~gg~~~~~~~~~~----------------~~--~~~--- 56 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-------EKGGQLTTTTEVEN----------------WP--GDP--- 56 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-------STTGGGGGCSBCCC----------------ST--TCC---
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-------CCCceEecchhhhh----------------CC--CCC---
Confidence 589999999999999999999999999999973 67887644321110 00 010
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
..+....+.. .+...+++.+++++.++...++. ..+.+.+ ..++..+.||+||+|||+.|..++.
T Consensus 57 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~~i~~---~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~~~~ 121 (320)
T 1trb_A 57 NDLTGPLLME-----------RMHEHATKFETEIIFDHINKVDL---QNRPFRL-NGDNGEYTCDALIIATGASARYLGL 121 (320)
T ss_dssp SSCBHHHHHH-----------HHHHHHHHTTCEEECCCEEEEEC---SSSSEEE-EESSCEEEEEEEEECCCEEECCCCC
T ss_pred CCCCHHHHHH-----------HHHHHHHHCCCEEEEeeeeEEEe---cCCEEEE-EeCCCEEEcCEEEECCCCCcCCCCC
Confidence 0112222222 23345667899999887555543 2344554 3356789999999999998876554
Q ss_pred CcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 550 VKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 550 ~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
++.. ...+.+..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+.+.+++.||
T Consensus 122 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv 199 (320)
T 1trb_A 122 PSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNI 199 (320)
T ss_dssp HHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSE
T ss_pred CChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCe
Confidence 3311 22333333333333568999999999999999999999999999999988764 367788888899999999
Q ss_pred EEEeCceEEEEEEcCCeE-EEEEeeC-C-CCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC--
Q psy9583 627 NIILNTKIHDIKINKENV-LINYSNK-S-TNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC-- 701 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~-~v~~~~~-~-g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l-- 701 (866)
++++++.++++..+++.+ .+.+.+. + |. ..++++|.|++|+|++|+.+++ + .+++++ +|+|.||+++
T Consensus 200 ~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~----~~~i~~D~vv~a~G~~p~~~~~--~-~~l~~~-~G~i~vd~~~~~ 271 (320)
T 1trb_A 200 ILHTNRTLEEVTGDQMGVTGVRLRDTQNSDN----IESLDVAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHG 271 (320)
T ss_dssp EEECSCEEEEEEECSSSEEEEEEECCTTCCC----CEEEECSEEEECSCEEESCGGG--T-TTSCEE-TTEECCCCSSSS
T ss_pred EEEcCceeEEEEcCCCceEEEEEEeccCCCc----eEEEEcCEEEEEeCCCCChHHh--c-cccccc-CceEEECCCccc
Confidence 999999999998876443 3555531 1 32 3479999999999999999874 3 467888 8999999997
Q ss_pred ---CCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 702 ---ETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 702 ---~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
+|++|+|||+|||++. +..+..|..+|+.||.+|..
T Consensus 272 ~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 272 NATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAER 311 (320)
T ss_dssp CTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHH
Confidence 8999999999999986 47899999999999999963
No 72
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=3.7e-34 Score=309.92 Aligned_cols=287 Identities=18% Similarity=0.205 Sum_probs=204.6
Q ss_pred hcccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc-eeccccchhHHHhhHHHHHHhhhhhhcC
Q psy9583 386 IMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT-NVGCIPSKALLQTSHSFENVKNSFFEYG 464 (866)
Q Consensus 386 ~m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~-~~g~~P~~~~~~~~~~~~~~~~~~~~~g 464 (866)
.|+ +|||+||||||||++||.+|++.|++|+|||++ .+||.+. +..+++..
T Consensus 3 ~M~-~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-------~~gg~~~~~~~~~~~~-------------------- 54 (304)
T 4fk1_A 3 AMK-YIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-------TNRNRVTQNSHGFITR-------------------- 54 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-------CCGGGGSSCBCCSTTC--------------------
T ss_pred CCC-CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-------CCCCeeeeecCCccCC--------------------
Confidence 355 699999999999999999999999999999985 4555432 11111100
Q ss_pred ccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 465 INTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 465 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
.......+.... .....+..++.++.+........ ....+++.+.++.++.||+||||||++|
T Consensus 55 -----~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 55 -----DGIKPEEFKEIG----------LNEVMKYPSVHYYEKTVVMITKQ--STGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp -----TTBCHHHHHHHH----------HHHHTTSTTEEEEECCEEEEEEC--TTSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred -----CCCCHHHHHHHH----------HHHHHhcCCEEEEeeEEEEeeec--CCCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 011222222211 11122233566666666554322 2244566667788999999999999999
Q ss_pred cCCCCCcCC---CceEecchhhhccccCCCeEEEECCcH-HHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHH
Q psy9583 545 RSFPGVKFD---ENLILSNKGALEMINVPKKLCIIGAGV-IGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHL 620 (866)
Q Consensus 545 ~~~p~~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~-~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~ 620 (866)
+.|+.++.. +..+++..........+++++|||||. .++|+|..+.+.+.+|+++.+.+.+. +.+.+.
T Consensus 118 ~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~--------~~~~~~ 189 (304)
T 4fk1_A 118 EFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS--------QTIMDE 189 (304)
T ss_dssp ECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC--------HHHHHH
T ss_pred ccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch--------hhhhhh
Confidence 877655422 334555555544455577888888775 57899999999999999998876543 345677
Q ss_pred HHHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC
Q psy9583 621 LNKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND 699 (866)
Q Consensus 621 l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 699 (866)
|+++|+.++.+. ++.+..+++.+ .+.+ .+|. ++++|.++++.|.+|+..+ ++++|++++++|+|.||+
T Consensus 190 l~~~g~~~~~~~-v~~~~~~~~~~~~v~~--~~g~------~i~~~~~vi~~g~~~~~~~--~~~~g~~~~~~G~I~vd~ 258 (304)
T 4fk1_A 190 LSNKNIPVITES-IRTLQGEGGYLKKVEF--HSGL------RIERAGGFIVPTFFRPNQF--IEQLGCELQSNGTFVIDD 258 (304)
T ss_dssp HHTTTCCEECSC-EEEEESGGGCCCEEEE--TTSC------EECCCEEEECCEEECSSCH--HHHTTCCCCTTSSSCSST
T ss_pred hhccceeEeeee-EEEeecCCCeeeeeec--cccc------eeeecceeeeeccccCChh--hhhcCeEECCCCCEEECc
Confidence 889999998764 77777655443 2444 3665 8889988888888877776 688899999999999999
Q ss_pred CCCCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHHh
Q psy9583 700 NCETNIPNIYAIGDVVR-GPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 700 ~l~Ts~~~VyA~GD~a~-~~~~~~~A~~~g~~aa~~i~ 736 (866)
+||||+|||||+|||++ .+.++..|+.||+.||.+|.
T Consensus 259 ~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 259 FGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp TCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999996 45678999999999998874
No 73
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.8e-33 Score=303.06 Aligned_cols=280 Identities=17% Similarity=0.165 Sum_probs=208.5
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
+||+|||||+||+++|..|++.|++|+|||+. ...++.... ..+++. ..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~------~~~~~~~~~------------------------~~~~~~-~~ 51 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAG------ERRNRFASH------------------------SHGFLG-QD 51 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECC------CCGGGGCSC------------------------CCSSTT-CT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCC------Ccccccchh------------------------hcCCcC-CC
Confidence 89999999999999999999999999999986 211111000 000000 01
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
..+...+..+ +...+++. +++++.++...++. ....+.+...++.++.||+||+|||+.|+.++.
T Consensus 52 ~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~ 117 (297)
T 3fbs_A 52 GKAPGEIIAE-----------ARRQIERYPTIHWVEGRVTDAKG---SFGEFIVEIDGGRRETAGRLILAMGVTDELPEI 117 (297)
T ss_dssp TCCHHHHHHH-----------HHHHHTTCTTEEEEESCEEEEEE---ETTEEEEEETTSCEEEEEEEEECCCCEEECCCC
T ss_pred CCCHHHHHHH-----------HHHHHHhcCCeEEEEeEEEEEEE---cCCeEEEEECCCCEEEcCEEEECCCCCCCCCCC
Confidence 1222222222 23345555 78888776655544 224566766777889999999999999876544
Q ss_pred CcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCC
Q psy9583 550 VKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGL 626 (866)
Q Consensus 550 ~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV 626 (866)
++.. ...+++..........+++++|||+|.+|+|+|..|.+.| +|+++.+.+. .+ ...+.+.|++.||
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---~~----~~~~~~~l~~~gv 189 (297)
T 3fbs_A 118 AGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---EP----DADQHALLAARGV 189 (297)
T ss_dssp BTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---CC----CHHHHHHHHHTTC
T ss_pred CCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---CC----CHHHHHHHHHCCc
Confidence 4322 2344444433333445899999999999999999999999 9999998876 22 2446778889999
Q ss_pred EEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeec--CCC-cEEeCCCCCC
Q psy9583 627 NIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN--ENN-FIIVNDNCET 703 (866)
Q Consensus 627 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~--~~G-~i~Vd~~l~T 703 (866)
+++. +.++++..++ .+.+. +|. ++++|.|++|+|++|+.++ ++.++++++ ++| +|.||++++|
T Consensus 190 ~i~~-~~v~~i~~~~---~v~~~--~g~------~~~~D~vi~a~G~~p~~~~--~~~~g~~~~~~~~G~~i~vd~~~~t 255 (297)
T 3fbs_A 190 RVET-TRIREIAGHA---DVVLA--DGR------SIALAGLFTQPKLRITVDW--IEKLGCAVEEGPMGSTIVTDPMKQT 255 (297)
T ss_dssp EEEC-SCEEEEETTE---EEEET--TSC------EEEESEEEECCEEECCCSC--HHHHTCCEEEETTEEEECCCTTCBC
T ss_pred EEEc-ceeeeeecCC---eEEeC--CCC------EEEEEEEEEccCcccCchh--HHhcCCccccCCCCceEEeCCCCcc
Confidence 9995 8999987543 44443 665 8999999999999999987 677888877 357 8999999999
Q ss_pred CCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 704 NIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 704 s~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
++|+|||+|||++.+++++.|+.||+.||.+|..
T Consensus 256 ~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 256 TARGIFACGDVARPAGSVALAVGDGAMAGAAAHR 289 (297)
T ss_dssp SSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHH
Confidence 9999999999998899999999999999999863
No 74
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-33 Score=284.36 Aligned_cols=175 Identities=14% Similarity=0.108 Sum_probs=156.1
Q ss_pred cccceEEEEeeeechHHHHHHHHhhhHHHhhccCccCHHHHHHHHHHHHHHhCCccceEEe-CCeeEEccceeEEEEE-e
Q psy9583 191 ANSAILTTFNEINMQSIIDLRLKYKDKFEKEHNVKLGFMSFFVKAVVSALKQYPIINASVD-GNNIIYHKYYDIGIAI-S 268 (866)
Q Consensus 191 ~~~p~~~~~~~~d~t~l~~~r~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~P~~n~~~~-~~~~~~~~~~~i~~av-~ 268 (866)
.++||++++.++|+|+|+++|++. ++|+++|++||+++||++||+||++|+ ++++++++++|||+|| +
T Consensus 25 ~~~P~~~~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf~ 94 (217)
T 2i9d_A 25 FQNPQLSITSEVECGGARQRAKAA----------GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKI 94 (217)
T ss_dssp CSBCEEEEEEEEECHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEEC
T ss_pred CCCceEEEEEEEEhHHHHHHHHHc----------CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEEe
Confidence 578999999999999999998642 799999999999999999999999999 8999999999999999 9
Q ss_pred cCCceEEeEEecCCCCCHHHHHHHHHHHHHHHhc-CCCCcc------ccCCceEEEEcCCCcCccccccccCCC---ceE
Q psy9583 269 SSRGLVVPILRNADTMSIADIEKKINEFINKAQD-NKLLPE------EMSGGTFTISNGGVFGSMLSTPIINPP---QSA 338 (866)
Q Consensus 269 ~~~gl~~pvi~~~~~~~~~~i~~~~~~~~~~~~~-~~l~~~------~~~~gt~tisn~g~~g~~~~~~ii~~p---~~~ 338 (866)
+++||++||+.. ..+++.+|+++++++++++|+ |+|.|+ |++||||||||+||++.+.++..++++ ..+
T Consensus 95 t~~GL~~pv~~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~~~e~~ggtftISnlg~~~ft~i~~~~~~g~~~~~P 173 (217)
T 2i9d_A 95 KENGKFFTTRFP-YHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFTSITGTQEKRSGNNYP 173 (217)
T ss_dssp STTSCEEEEEEC-CCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCSEECCCBCSTTCCSSC
T ss_pred cCCceEeEEEec-CCCCHHHHHHHHHHHHHHHHhcCCCCCccccccccCCCCEEEEEcCCccccceeecCCCCCccceEE
Confidence 999999999974 568999999999999999999 599995 999999999999998665554444434 258
Q ss_pred EEEeccceeeEEEeCCeeEeeeeeeeeecccccccccchhhhhhhh
Q psy9583 339 ILGVHAIKKRVIVENNNVVIRPINYFALSYDHRIIDGREAVLSLMS 384 (866)
Q Consensus 339 il~vg~~~~~~~~~~~~~~ir~~~~~~l~~dhr~~dg~~a~~~~~~ 384 (866)
|+++|++.++ ++ |++|++++++|||++||.++++|...
T Consensus 174 Ii~~Gk~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~ 211 (217)
T 2i9d_A 174 LLNAGKAIIR----EG----RLVMPIAMTIHHGFIDGHHLSLFYKK 211 (217)
T ss_dssp EEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEecceEEEE----CC----cEEEEEEEEecchhhChHHHHHHHHH
Confidence 9999999865 32 79999999999999999999988764
No 75
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=4.5e-33 Score=309.08 Aligned_cols=303 Identities=17% Similarity=0.258 Sum_probs=219.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|+.++||+|||||+||+++|..|++.|++|+|||+. +.+||.|.+. .|.+.+. ...+++
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~------~~~gg~~~~~--~~~~~~~-------------~~~~~~ 69 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESM------PQLGGQLAAL--YPEKHIY-------------DVAGFP 69 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCHHHHHT--CTTSEEC-------------CSTTCS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecC------CCCCCccccc--CCCcccc-------------cCCCCC
Confidence 334699999999999999999999999999999997 6788877432 2221110 000110
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCC--
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSK-- 543 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-- 543 (866)
.++...+. ..+...+++.+++++.+..+. ++.. ....+.+.+.++..+.||+||+|||+.
T Consensus 70 ----~~~~~~~~-----------~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~~li~AtG~~~~ 132 (360)
T 3ab1_A 70 ----EVPAIDLV-----------ESLWAQAERYNPDVVLNETVTKYTKL--DDGTFETRTNTGNVYRSRAVLIAAGLGAF 132 (360)
T ss_dssp ----SEEHHHHH-----------HHHHHHHHTTCCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEEEEEEECCTTCSC
T ss_pred ----CCCHHHHH-----------HHHHHHHHHhCCEEEcCCEEEEEEEC--CCceEEEEECCCcEEEeeEEEEccCCCcC
Confidence 11222222 123445667789888765544 3321 112566666667789999999999994
Q ss_pred -CcCCCCCc-C---CCceEec-chhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHH
Q psy9583 544 -ARSFPGVK-F---DENLILS-NKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKA 617 (866)
Q Consensus 544 -p~~~p~~~-~---~~~~~~t-~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l 617 (866)
|..++..+ . .+..++. ..+... ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+. ++..+.+
T Consensus 133 ~~~~~~i~g~~~~~~~~~v~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~l 208 (360)
T 3ab1_A 133 EPRKLPQLGNIDHLTGSSVYYAVKSVED--FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHEV 208 (360)
T ss_dssp CBCCCGGGCCCTTTBTTTEESSCSCGGG--GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHSS
T ss_pred CCCCCCCCCchhhCcCceEEEecCCHHH--cCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHHH
Confidence 44333222 1 1112222 111111 24789999999999999999999999999999999887653 3566778
Q ss_pred HHHHHHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEE
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFII 696 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 696 (866)
.+.+++.||++++++.++++..+++.+ .+.+...+|. ...+++|.|++|+|++|+.++ ++..+++++ +|+|.
T Consensus 209 ~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~ 281 (360)
T 3ab1_A 209 ERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGS----KWTVEADRLLILIGFKSNLGP--LARWDLELY-ENALV 281 (360)
T ss_dssp HHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCC----EEEEECSEEEECCCBCCSCGG--GGGSSCCEE-TTEEE
T ss_pred HHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCC----eEEEeCCEEEECCCCCCCHHH--HHhhccccc-cCeee
Confidence 888899999999999999998876543 3444433442 347999999999999999987 577888887 78999
Q ss_pred eCCCCCCCCCCEEEecccCC---CCCcHHHHHHHHHHHHHHHhCC
Q psy9583 697 VNDNCETNIPNIYAIGDVVR---GPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a~---~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
||+++||++|+|||+|||+. .+++++.|..||++||+||++.
T Consensus 282 vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 326 (360)
T 3ab1_A 282 VDSHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSY 326 (360)
T ss_dssp CCTTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhh
Confidence 99999999999999999995 4679999999999999999753
No 76
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.1e-32 Score=302.91 Aligned_cols=299 Identities=21% Similarity=0.219 Sum_probs=220.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.++||+|||||+||+++|..|++.|++|+|||+.+ .....+||.|.+....... .+++.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~--~~~~~~gg~~~~~~~~~~~------------------~~~~~- 79 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM--ANGIAAGGQLTTTTEIENF------------------PGFPD- 79 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS--BTTBCTTCGGGGSSEECCS------------------TTCTT-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC--CCCCCcCcccccchhhccc------------------CCCcc-
Confidence 35899999999999999999999999999999952 2235788877543211100 01100
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEc---CCceEEEecEEEEecCCCCc
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIIN---KTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~---~~g~~i~~d~lViATGs~p~ 545 (866)
......+. ..+...+++.+++++.++...++. ..+.+.+.. .++..+.||+||+|||+.|.
T Consensus 80 --~~~~~~~~-----------~~~~~~~~~~gv~i~~~~v~~i~~---~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 80 --GLTGSELM-----------DRMREQSTKFGTEIITETVSKVDL---SSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp --CEEHHHHH-----------HHHHHHHHHTTCEEECSCEEEEEC---SSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred --cCCHHHHH-----------HHHHHHHHHcCCEEEEeEEEEEEE---cCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 01111221 224456777899999988444543 335566654 35578999999999999887
Q ss_pred CCCCCcCC---CceEecchhhhcc--ccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHH
Q psy9583 546 SFPGVKFD---ENLILSNKGALEM--INVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHL 620 (866)
Q Consensus 546 ~~p~~~~~---~~~~~t~~~~~~~--~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~ 620 (866)
.++.++.. ...+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.++. ...+.+.
T Consensus 144 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~~~ 217 (338)
T 3itj_A 144 RMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQKR 217 (338)
T ss_dssp CCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHHHH
T ss_pred CCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHHHH
Confidence 66544321 2233333333322 34579999999999999999999999999999999988765 3445566
Q ss_pred HHHc-CCEEEeCceEEEEEEcCCeEE-EEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEe
Q psy9583 621 LNKQ-GLNIILNTKIHDIKINKENVL-INYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIV 697 (866)
Q Consensus 621 l~~~-GV~i~~~~~v~~i~~~~~~~~-v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~V 697 (866)
+.+. ||++++++.+++++.+++.+. +.+.+. +|. ..++++|.||+|+|++|+..++ +. +++++++|+|.|
T Consensus 218 l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~~--~~-~l~~~~~G~i~v 290 (338)
T 3itj_A 218 AEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNE----ETDLPVSGLFYAIGHTPATKIV--AG-QVDTDEAGYIKT 290 (338)
T ss_dssp HHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTE----EEEEECSEEEECSCEEECCGGG--BT-TBCBCTTSCBCC
T ss_pred HHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCc----eEEEEeCEEEEEeCCCCChhHh--hC-ceEecCCCcEEE
Confidence 6555 999999999999998776443 666531 221 3579999999999999999874 44 899998999985
Q ss_pred -CCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 698 -NDNCETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 698 -d~~l~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
|++++|++|+|||+|||++. ++.+..|+.||+.||.+|..
T Consensus 291 ~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 291 VPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp CTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHH
Confidence 88999999999999999974 68899999999999999864
No 77
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.1e-32 Score=302.11 Aligned_cols=294 Identities=17% Similarity=0.240 Sum_probs=216.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||+||++||..|++.|++|+|||+. +.+||.|.+ +.|...+. .++..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~------~~~gG~~~~--~~~~~~~~----------------~~~~~- 61 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESL------PQLGGQLSA--LYPEKYIY----------------DVAGF- 61 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCHHHHH--HCTTSEEC----------------CSTTC-
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC------CCCCceehh--cCCCceEe----------------ccCCC-
Confidence 489999999999999999999999999999998 678887732 22221110 01000
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCC---CCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGS---KAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs---~p~ 545 (866)
.......+. ..+...+++.+++++.+..+. ++.. ....+.+.+.+++ +.||+||+|||+ .|.
T Consensus 62 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 62 PKIRAQELI-----------NNLKEQMAKFDQTICLEQAVESVEKQ--ADGVFKLVTNEET-HYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp SSEEHHHHH-----------HHHHHHHTTSCCEEECSCCEEEEEEC--TTSCEEEEESSEE-EEEEEEEECCTTSCCEEC
T ss_pred CCCCHHHHH-----------HHHHHHHHHhCCcEEccCEEEEEEEC--CCCcEEEEECCCE-EEeCEEEECCCCCcCCCC
Confidence 011122222 224455667799998766555 4331 1124566666665 999999999999 676
Q ss_pred CCCCCcCCC---ceEecchhhhcccc-CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHH
Q psy9583 546 SFPGVKFDE---NLILSNKGALEMIN-VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLL 621 (866)
Q Consensus 546 ~~p~~~~~~---~~~~t~~~~~~~~~-~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l 621 (866)
.++.++... ..++. ...+... .+++++|||+|.+|+|+|..|.+.+.+|+++++.+++.+ .+.. .+.|
T Consensus 128 ~~~~~g~~~~~g~~~~~--~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-~~~~-----~~~l 199 (332)
T 3lzw_A 128 KLELENAEQYEGKNLHY--FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-HEHS-----VENL 199 (332)
T ss_dssp CCCCTTGGGGBTTTEES--SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-CHHH-----HHHH
T ss_pred CCCCCChhhccCceEEE--ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-cHHH-----HHHH
Confidence 554433221 22222 2222222 378999999999999999999999999999999988754 2222 3457
Q ss_pred HHcCCEEEeCceEEEEEEcCCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCC
Q psy9583 622 NKQGLNIILNTKIHDIKINKENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDN 700 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~ 700 (866)
++.||++++++.+.++..+++...+.+.+. ++. ..++++|.|++|+|++|+.++ ++.+++++ ++|+|.||++
T Consensus 200 ~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~~~~D~vv~a~G~~p~~~~--~~~~~~~~-~~g~i~vd~~ 272 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDR----KEILEIDDLIVNYGFVSSLGP--IKNWGLDI-EKNSIVVKST 272 (332)
T ss_dssp HHSSCEEETTEEEEEEECSSSCCEEEEEETTSCC----EEEEECSEEEECCCEECCCGG--GGGSSCCE-ETTEEECCTT
T ss_pred hcCCeEEEeCceeeEEecCCceEEEEEEecCCCc----eEEEECCEEEEeeccCCCchH--HhhcCccc-cCCeEEeCCC
Confidence 889999999999999988766555666542 222 357999999999999999987 67888888 5899999999
Q ss_pred CCCCCCCEEEecccC---CCCCcHHHHHHHHHHHHHHHhC
Q psy9583 701 CETNIPNIYAIGDVV---RGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 701 l~Ts~~~VyA~GD~a---~~~~~~~~A~~~g~~aa~~i~g 737 (866)
++|++|+|||+|||+ +.+++++.|+.||+.||.+|+.
T Consensus 273 ~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 273 METNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp SBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 999999999999999 5678999999999999999974
No 78
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.6e-33 Score=320.42 Aligned_cols=299 Identities=17% Similarity=0.220 Sum_probs=215.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
+.+|||||||+||+++|.+|++.+++|+|||++++.+..+.+ +......++...
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL--------------------------~~va~G~l~~~~ 95 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLL--------------------------PSAPVGTVDEKS 95 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGG--------------------------GGTTTTSSCGGG
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccch--------------------------hHHhhccccHHH
Confidence 468999999999999999999999999999997321111110 000000111111
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEc------------------CCceEE
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIIN------------------KTKETI 531 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~------------------~~g~~i 531 (866)
...++..+ ...++.+++++.+++..+|. +.+++.+.. .++.++
T Consensus 96 i~~p~~~~----------------~~~~~~~v~~~~~~v~~ID~---~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i 156 (502)
T 4g6h_A 96 IIEPIVNF----------------ALKKKGNVTYYEAEATSINP---DRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEI 156 (502)
T ss_dssp GEEEHHHH----------------HTTCSSCEEEEEEEEEEEEG---GGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEE
T ss_pred hhhhHHHH----------------HHhhcCCeEEEEEEEEEEEh---hhCEEEEeecccceeecccccccccccCCceEE
Confidence 11111111 01234579999998877765 556666542 235789
Q ss_pred EecEEEEecCCCCcCCCCCcCC--CceEecchhhhcccc--------------------CCCeEEEECCcHHHHHHHHHH
Q psy9583 532 TAKYIIIATGSKARSFPGVKFD--ENLILSNKGALEMIN--------------------VPKKLCIIGAGVIGLEIGSIW 589 (866)
Q Consensus 532 ~~d~lViATGs~p~~~p~~~~~--~~~~~t~~~~~~~~~--------------------~~~~vvVIGgG~~glE~A~~l 589 (866)
.||+||||||+.|..++.++.. ...+.+..++..+.. ...+++|||||++|+|+|..|
T Consensus 157 ~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l 236 (502)
T 4g6h_A 157 KYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGEL 236 (502)
T ss_dssp ECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHH
T ss_pred eCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHH
Confidence 9999999999998866544422 112223333332210 124799999999999999998
Q ss_pred HhcC--------------CcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCc
Q psy9583 590 RRLG--------------SEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNV 655 (866)
Q Consensus 590 ~~~g--------------~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~ 655 (866)
.+++ .+|+++++.+++++.+++++++.+++.|+++||++++++.|++++. +++.+.....+|.
T Consensus 237 ~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~- 313 (502)
T 4g6h_A 237 QDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGK- 313 (502)
T ss_dssp HHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSC-
T ss_pred HHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcc-
Confidence 8653 5799999999999999999999999999999999999999999864 4455554444553
Q ss_pred cceeEEEeccEEEEeeccccCCCCCC-ccccCeeecCCCcEEeCCCCCC-CCCCEEEecccCC--CCCcHHHHHHHHHHH
Q psy9583 656 KTEIITSIFDKLLIAIGRIPNTNNLN-IDKIGLKVNENNFIIVNDNCET-NIPNIYAIGDVVR--GPMLAHKAEEEGIMV 731 (866)
Q Consensus 656 ~~~~~~~~~D~vi~a~G~~p~~~~l~-l~~~gl~~~~~G~i~Vd~~l~T-s~~~VyA~GD~a~--~~~~~~~A~~~g~~a 731 (866)
....++++|.||||+|++|+..... ....+...+.+|+|.||++||| ++|||||+|||+. .|++++.|.+||+++
T Consensus 314 -~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~ 392 (502)
T 4g6h_A 314 -ITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYL 392 (502)
T ss_dssp -EEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHH
T ss_pred -cceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHH
Confidence 1234799999999999999842111 2445666777899999999998 8999999999985 467999999999999
Q ss_pred HHHHhC
Q psy9583 732 AEHISG 737 (866)
Q Consensus 732 a~~i~g 737 (866)
|+||.+
T Consensus 393 A~ni~~ 398 (502)
T 4g6h_A 393 AKNFDK 398 (502)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999953
No 79
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-32 Score=302.90 Aligned_cols=295 Identities=17% Similarity=0.250 Sum_probs=213.4
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN 466 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~ 466 (866)
|..++||+|||||+||+++|..|++.|++|+|||+. .+||.|........ +. +++
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-------~~gg~~~~~~~~~~----------------~~--~~~ 65 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-------SFGGALMTTTDVEN----------------YP--GFR 65 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-------SCSCGGGSCSCBCC----------------ST--TCT
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-------CCCCceeccchhhh----------------cC--CCC
Confidence 334689999999999999999999999999999974 67887754321110 00 000
Q ss_pred ccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEE-EcCCceEEEecEEEEecCCCCc
Q psy9583 467 TQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQI-INKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v-~~~~g~~i~~d~lViATGs~p~ 545 (866)
..+....+.. .+...+++.+++++.++...++. .+.+.+ .+.++..+.||+||+|||+.|.
T Consensus 66 ---~~~~~~~~~~-----------~l~~~~~~~~v~~~~~~v~~i~~----~~~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 66 ---NGITGPELMD-----------EMREQALRFGADLRMEDVESVSL----HGPLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp ---TCBCHHHHHH-----------HHHHHHHHTTCEEECCCEEEEEC----SSSSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred ---CCCCHHHHHH-----------HHHHHHHHcCCEEEEeeEEEEEe----CCcEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 0112222222 23345667899999887444443 122333 4456678999999999999887
Q ss_pred CCCCCcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHH-HHH
Q psy9583 546 SFPGVKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF-HLL 621 (866)
Q Consensus 546 ~~p~~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~-~~l 621 (866)
.++.++.. ...+++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+... +.+. +.+
T Consensus 128 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~------~~~~~~~~ 201 (335)
T 2a87_A 128 YLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS------KIMLDRAR 201 (335)
T ss_dssp CCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC------TTHHHHHH
T ss_pred CCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc------HHHHHHHh
Confidence 66544321 1234433333333346899999999999999999999999999999999877531 1222 445
Q ss_pred HHcCCEEEeCceEEEEEEcCCeEEEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCC
Q psy9583 622 NKQGLNIILNTKIHDIKINKENVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDN 700 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~ 700 (866)
++.||++++++.++++..+++...+.+.. .+|. ..++++|.|++|+|++|+++++ + .+++++++|+|.||++
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~ 274 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGA----ETTLPVTGVFVAIGHEPRSGLV--R-EAIDVDPDGYVLVQGR 274 (335)
T ss_dssp HCTTEEEECSEEEEEEECSSSCCEEEEEEETTSC----CEEECCSCEEECSCEEECCTTT--B-TTBCBCTTSCBCCSTT
T ss_pred ccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCc----eEEeecCEEEEccCCccChhHh--h-cccccCCCccEEeCCC
Confidence 67899999999999998765322344432 1332 2479999999999999999884 3 4788888999999996
Q ss_pred -CCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 701 -CETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 701 -l~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
++|++|+|||+|||++. ++.+..|..+|+.||.+|..
T Consensus 275 ~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 275 TTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp SSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHH
Confidence 68999999999999976 57899999999999999863
No 80
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=4e-32 Score=297.95 Aligned_cols=297 Identities=21% Similarity=0.281 Sum_probs=213.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||++|+++|..|++.|++|+|||+. ......+||.|........ +. +++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~--~~~~~~~gg~~~~~~~~~~----------------~~--~~~--- 64 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGW--MANDIAPGGQLTTTTDVEN----------------FP--GFP--- 64 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS--SBTTBCTTCGGGGCSEECC----------------ST--TCT---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEecc--CccccCCCceeeecccccc----------------CC--CCc---
Confidence 589999999999999999999999999999982 0011456776643221100 00 000
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFPG 549 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p~ 549 (866)
..++...+. ..+...+++.+++++.++...++. ..+.+.+.+ ++..+.||+||+|||+.|..++.
T Consensus 65 ~~~~~~~~~-----------~~l~~~~~~~gv~~~~~~v~~i~~---~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~ 129 (333)
T 1vdc_A 65 EGILGVELT-----------DKFRKQSERFGTTIFTETVTKVDF---SSKPFKLFT-DSKAILADAVILAIGAVAKRLSF 129 (333)
T ss_dssp TCEEHHHHH-----------HHHHHHHHHTTCEEECCCCCEEEC---SSSSEEEEC-SSEEEEEEEEEECCCEEECCCCC
T ss_pred cCCCHHHHH-----------HHHHHHHHHCCCEEEEeEEEEEEE---cCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCC
Confidence 011122222 123445667899998887444433 234455655 56789999999999999876654
Q ss_pred CcCCC-------ceEecchhhhccc--cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHH-H
Q psy9583 550 VKFDE-------NLILSNKGALEMI--NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAF-H 619 (866)
Q Consensus 550 ~~~~~-------~~~~t~~~~~~~~--~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~-~ 619 (866)
++... ..+.+........ ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . +.+. +
T Consensus 130 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~----~~~~~~ 203 (333)
T 1vdc_A 130 VGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--S----KIMQQR 203 (333)
T ss_dssp BTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--C----HHHHHH
T ss_pred CCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--c----HHHHHH
Confidence 43222 2233332222222 4579999999999999999999999999999999987643 2 2233 4
Q ss_pred HHHHcCCEEEeCceEEEEEEcCC--eE-EEEEeeC-CCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKE--NV-LINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~--~~-~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
.+++.||++++++.+.++..+++ .+ .+.+.+. +|. ..++++|.|++|+|++|+.+++ + .+++++++|+|
T Consensus 204 ~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~----~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i 276 (333)
T 1vdc_A 204 ALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGD----VSDLKVSGLFFAIGHEPATKFL--D-GGVELDSDGYV 276 (333)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCC----EEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCB
T ss_pred HHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCc----eEEEecCEEEEEeCCccchHHh--h-ccccccCCCCE
Confidence 45678999999999999998764 33 3555431 332 3479999999999999999874 3 47888888999
Q ss_pred EeCCC-CCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHHhC
Q psy9583 696 IVNDN-CETNIPNIYAIGDVVRG-PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 696 ~Vd~~-l~Ts~~~VyA~GD~a~~-~~~~~~A~~~g~~aa~~i~g 737 (866)
.||++ ++|+.|+|||+|||++. ++.+..|..+|+.||.+|..
T Consensus 277 ~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 277 VTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp CCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHH
Confidence 99997 68999999999999986 47899999999999999963
No 81
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.4e-31 Score=310.54 Aligned_cols=295 Identities=23% Similarity=0.321 Sum_probs=217.2
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
..+||+||||||||++||.+|++.|++|+|||+ .+||.|....+++.. . +.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--------~~GG~~~~~~~~~~~----------------~--~~~-- 262 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--------RFGGQVLDTVDIENY----------------I--SVP-- 262 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--------STTGGGTTCSCBCCB----------------T--TBS--
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--------CCCCccccccccccc----------------C--CCC--
Confidence 368999999999999999999999999999985 468887543322210 0 000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEE-EeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAI-FTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v-~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
......+ ...+...+++.+++++.++.+ .++........+.+..++|..+.||+||+|||+.|+.+
T Consensus 263 --~~~~~~l-----------~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 263 --KTEGQKL-----------AGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp --SBCHHHH-----------HHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred --CCCHHHH-----------HHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCC
Confidence 1112222 122445567889999998444 35321111234566656777899999999999988765
Q ss_pred CCCcCC---CceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHH-
Q psy9583 548 PGVKFD---ENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNK- 623 (866)
Q Consensus 548 p~~~~~---~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~- 623 (866)
+.++.. ...++...........+++++|||+|++|+|+|..|++.|.+|+++++.+.+.. + ..+.+.|++
T Consensus 330 ~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~~~l~~~ 403 (521)
T 1hyu_A 330 NVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQDKVRSL 403 (521)
T ss_dssp CCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHHHHHTTC
T ss_pred CCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHHHHHhcC
Confidence 433321 223333332222223579999999999999999999999999999999988764 2 345666777
Q ss_pred cCCEEEeCceEEEEEEcCCeE-EEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCC
Q psy9583 624 QGLNIILNTKIHDIKINKENV-LINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNC 701 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~~~~-~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l 701 (866)
.||++++++.++++..+++.+ .+.+.+ .+|. ..++++|.|++|+|++||++++ +. .++++++|+|.||+++
T Consensus 404 ~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~----~~~i~~D~vi~a~G~~pn~~~l--~~-~l~~~~~G~I~Vd~~~ 476 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGD----IHSVALAGIFVQIGLLPNTHWL--EG-ALERNRMGEIIIDAKC 476 (521)
T ss_dssp TTEEEECSEEEEEEEECSSSEEEEEEEETTTCC----EEEEECSEEEECCCEEESCGGG--TT-TSCBCTTSCBCCCTTC
T ss_pred CCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCc----eEEEEcCEEEECcCCCCCchHH--hh-hhccCCCCcEEeCCCC
Confidence 699999999999998865544 455653 2232 3578999999999999999874 44 4788889999999999
Q ss_pred CCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHHhC
Q psy9583 702 ETNIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 702 ~Ts~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i~g 737 (866)
+|++|+|||+|||++.+ +.+..|+.+|+.||.+|..
T Consensus 477 ~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 477 ETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp BCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHH
Confidence 99999999999999865 6899999999999999864
No 82
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=1.6e-31 Score=297.58 Aligned_cols=316 Identities=15% Similarity=0.197 Sum_probs=211.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCC-eEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcc-c
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGF-KTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGIN-T 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~-~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~-~ 467 (866)
++||+|||||+||+++|..|++.|+ +|+|||+. + +||.|.+... +......... ...+++. .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~------~-~Gg~~~~~~~---~~~~~~~~~~------~~~~g~~~~ 67 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKG------T-VGHSFKHWPK---STRTITPSFT------SNGFGMPDM 67 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSS------S-TTHHHHTSCT---TCBCSSCCCC------CGGGTCCCT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecC------C-CCCccccCcc---cccccCcchh------cccCCchhh
Confidence 4899999999999999999999999 99999997 4 8888765321 1100000000 0111210 0
Q ss_pred cccccCHHHHHHHHHHH--HHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 468 QNVTLNLQKMLERKNNI--IKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
.....++...+...... ...+...+..++++.+++++.++.+. ++. ..+.+.+.+.++ .+.||+||+|||+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 68 NAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISA---DDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp TCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---CSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred hhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEE---CCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 00000110000000000 01112234556677899999887555 443 212455655555 689999999999976
Q ss_pred cCCCCCcCCCceEecchhhhcccc-CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------cccHHHHHH
Q psy9583 545 RSFPGVKFDENLILSNKGALEMIN-VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-------TVDEEIAKK 616 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~~~~~~~~~-~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-------~~d~~~~~~ 616 (866)
. |..++ ..++++..+..... ..++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .+++...+.
T Consensus 144 ~-p~ip~---~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~ 219 (369)
T 3d1c_A 144 F-PKKPF---KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQR 219 (369)
T ss_dssp S-BCCCS---SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHH
T ss_pred c-cCCCC---CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHH
Confidence 4 11111 23344444444333 357999999999999999999999999999999988774 256777889
Q ss_pred HHHHHHHcC-CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 617 AFHLLNKQG-LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 617 l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
+.+.|++.| |++++++.|.+++.+++...+.+. +|. ....+|.||+|+|++|+.+++ .+.+++ +++|++
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~--~g~-----~~~~~d~vi~a~G~~~~~~~~--~~~~~~-~~~g~i 289 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFD--SGQ-----SVHTPHEPILATGFDATKNPI--VQQLFV-TTNQDI 289 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEETTEEEEEES--SSC-----CEEESSCCEECCCBCGGGSHH--HHHHSC-CTTSCC
T ss_pred HHHHHhhCCcEEEecCcEEEEEEecCCceEEEec--CCe-----EeccCCceEEeeccCCccchh--hhhhcc-CCCCCE
Confidence 999999997 999999999999876666666664 554 133469999999999999763 444566 678999
Q ss_pred EeCCC-CCCCCCCEEEecccCCCCC----cHHHHHHHHHHHHHHHhCCC
Q psy9583 696 IVNDN-CETNIPNIYAIGDVVRGPM----LAHKAEEEGIMVAEHISGQK 739 (866)
Q Consensus 696 ~Vd~~-l~Ts~~~VyA~GD~a~~~~----~~~~A~~~g~~aa~~i~g~~ 739 (866)
.||++ ++|++|+|||+|||+..+. .++.+.+||+++|++|.+..
T Consensus 290 ~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 290 KLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp CBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHT
T ss_pred EechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhccc
Confidence 99986 6799999999999997432 35678889999999998753
No 83
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=1.5e-31 Score=303.71 Aligned_cols=285 Identities=21% Similarity=0.275 Sum_probs=205.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
.+||+||||||||++||..|++.|++|+|||+. +.+||.+.+ +++...
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~------~~~GG~l~~--------------------------gip~~~ 169 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRY------DRMGGLLVY--------------------------GIPGFK 169 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSS------SSCSTHHHH--------------------------TSCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEecc------CCCCCeeee--------------------------cCCCcc
Confidence 489999999999999999999999999999997 577886421 221110
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC-CcCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK-ARSFP 548 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~-p~~~p 548 (866)
.+ ..++. ....++++.|++++.++.+. ..+.+ ++. .+.||+||||||+. |+.++
T Consensus 170 --~~-~~~~~-----------~~~~~l~~~gv~~~~~~~v~--------~~v~~--~~~-~~~~d~vvlAtG~~~~~~~~ 224 (456)
T 2vdc_G 170 --LE-KSVVE-----------RRVKLLADAGVIYHPNFEVG--------RDASL--PEL-RRKHVAVLVATGVYKARDIK 224 (456)
T ss_dssp --SC-HHHHH-----------HHHHHHHHTTCEEETTCCBT--------TTBCH--HHH-HSSCSEEEECCCCCEECCTT
T ss_pred --CC-HHHHH-----------HHHHHHHHCCcEEEeCCEec--------cEEEh--hHh-HhhCCEEEEecCCCCCCCCC
Confidence 00 11111 12345677899988776432 11111 112 35699999999996 55444
Q ss_pred CCcCCCceEecchhhhc------------------cccCCCeEEEECCcHHHHHHHHHHHhcCCc-EEEEecCCcC-CCc
Q psy9583 549 GVKFDENLILSNKGALE------------------MINVPKKLCIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNF-LNT 608 (866)
Q Consensus 549 ~~~~~~~~~~t~~~~~~------------------~~~~~~~vvVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~-l~~ 608 (866)
.++.+...+++..+++. ....+++|+|||||.+|+|+|..+.+.|.+ |++++|++.. ++.
T Consensus 225 ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~ 304 (456)
T 2vdc_G 225 APGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG 304 (456)
T ss_dssp CSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS
T ss_pred CCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC
Confidence 44433344554322211 113578999999999999999999999984 9999999876 666
Q ss_pred ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEe-------eCCCCc-----cceeEEEeccEEEEeecccc
Q psy9583 609 VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYS-------NKSTNV-----KTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 609 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~-------~~~g~~-----~~~~~~~~~D~vi~a~G~~p 675 (866)
.+.+ .+.+++.||++++++.++++..++ .+. +.+. +.+|+. .++..++++|.||+|+|+.|
T Consensus 305 ~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~g-~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 305 SQRE-----VAHAEEEGVEFIWQAAPEGFTGDT-VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEP 378 (456)
T ss_dssp CHHH-----HHHHHHTTCEEECCSSSCCEEEEE-EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred CHHH-----HHHHHHCCCEEEeCCCceEEeCCC-cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCC
Confidence 5544 345778899999999998887532 221 1111 112321 12345799999999999999
Q ss_pred CCCCCCccccCeeecCCCcEEeCCC-CCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 676 NTNNLNIDKIGLKVNENNFIIVNDN-CETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 676 ~~~~l~l~~~gl~~~~~G~i~Vd~~-l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+...+.++.++++++++|+|.||++ ++|++|+|||+|||+.++.++..|+.+|+.||.+|..
T Consensus 379 ~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 379 EDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp CCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHH
Confidence 8762115778999999999999998 9999999999999999999999999999999999974
No 84
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=5.2e-31 Score=291.57 Aligned_cols=304 Identities=15% Similarity=0.175 Sum_probs=203.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||++|+++|..|++.|++|+|||+. +.+||.|.+ +.|...+....... .+..+..+...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~------~~~gg~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~ 69 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAE------ASPGGAWQH--AWHSLHLFSPAGWS-----SIPGWPMPASQ 69 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCS------SSSSGGGGG--SCTTCBCSSCGGGS-----CCSSSCCCCCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC------CCCCCcccC--CCCCcEecCchhhh-----hCCCCCCCCCc
Confidence 489999999999999999999999999999998 678998864 23322211111100 01111111100
Q ss_pred c-ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEE-EEcCCceEEEecEEEEecCC--CC
Q psy9583 470 V-TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQ-IINKTKETITAKYIIIATGS--KA 544 (866)
Q Consensus 470 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~-v~~~~g~~i~~d~lViATGs--~p 544 (866)
. ......+ ...+...+++.+++++.++.+. ++. ..+.+. +.++++ ++.||+||+|||. .|
T Consensus 70 ~~~~~~~~~-----------~~~l~~~~~~~~~~~~~~~~v~~i~~---~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 70 GPYPARAEV-----------LAYLAQYEQKYALPVLRPIRVQRVSH---FGERLRVVARDGR-QWLARAVISATGTWGEA 134 (357)
T ss_dssp SSSCBHHHH-----------HHHHHHHHHHTTCCEECSCCEEEEEE---ETTEEEEEETTSC-EEEEEEEEECCCSGGGB
T ss_pred cCCCCHHHH-----------HHHHHHHHHHcCCEEEcCCEEEEEEE---CCCcEEEEEeCCC-EEEeCEEEECCCCCCCC
Confidence 0 1111222 2224556777899988876555 332 335677 777666 8999999999995 45
Q ss_pred cCCCCCcCC--CceEecchhhhc-cccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecC-CcCCCcc--cHHHHHHHH
Q psy9583 545 RSFPGVKFD--ENLILSNKGALE-MINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS-SNFLNTV--DEEIAKKAF 618 (866)
Q Consensus 545 ~~~p~~~~~--~~~~~t~~~~~~-~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~-~~~l~~~--d~~~~~~l~ 618 (866)
..++.++.. ....++..+... ....+++++|||+|.+|+|+|..|.+.| +|+++.+. +.+++.. ...+...+.
T Consensus 135 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~ 213 (357)
T 4a9w_A 135 YTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERAT 213 (357)
T ss_dssp CCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC--
T ss_pred CCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHH
Confidence 444433321 112333322222 2335799999999999999999999998 69999988 4555532 344444333
Q ss_pred HHHH----------------------------HcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEe
Q psy9583 619 HLLN----------------------------KQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIA 670 (866)
Q Consensus 619 ~~l~----------------------------~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a 670 (866)
+.+. +.|+ +..+..+.++..+ + +.+ .+|. ++++|.|++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~--~--v~~--~~g~------~i~~D~vi~a 280 (357)
T 4a9w_A 214 ERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPT--G--MQW--ADGT------ERAFDAVIWC 280 (357)
T ss_dssp --------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETT--E--EEC--TTSC------EEECSEEEEC
T ss_pred HHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCC--e--eEE--CCCC------EecCCEEEEC
Confidence 3333 3344 4455566665532 2 333 3665 8999999999
Q ss_pred eccccCCCCCCccccCeeecCCCcEEeCCC--CCCCCCCEEEec--ccCC-CCCcHHHHHHHHHHHHHHHhCC
Q psy9583 671 IGRIPNTNNLNIDKIGLKVNENNFIIVNDN--CETNIPNIYAIG--DVVR-GPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 671 ~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~--l~Ts~~~VyA~G--D~a~-~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
+|++|++++ +++.++. +++|+|.||++ ++|++|+|||+| ||++ .+..+..|..||+.+|++|...
T Consensus 281 ~G~~p~~~~--l~~~gl~-~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 281 TGFRPALSH--LKGLDLV-TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp CCBCCCCGG--GTTTTCB-CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHH
T ss_pred CCcCCCCcc--cCccccc-CCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHH
Confidence 999999987 5788888 77899999999 899999999999 6665 5678888999999999999753
No 85
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=7.7e-32 Score=335.23 Aligned_cols=315 Identities=17% Similarity=0.238 Sum_probs=225.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCC-eEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGF-KTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~-~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.+||+||||||||++||.+|++.|+ +|+|||+. +.+||.+. .++|.. +++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~------~~~GG~~~--~~ip~~-------------------~~~-- 237 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQ------EYVGGLST--SEIPQF-------------------RLP-- 237 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS------SSCSTHHH--HTSCTT-------------------TSC--
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCC------CCCCcccc--ccCCcc-------------------cCC--
Confidence 4899999999999999999999999 79999997 67888642 122211 110
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCC-CCcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGS-KARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs-~p~~~ 547 (866)
.....+ ...++++.||+++.++.+.. +.+.+ +++..+.||+||||||+ .|+.+
T Consensus 238 ------~~~~~~-----------~~~~~~~~gv~~~~~~~v~~-------~~v~~--~~~~~~~~d~vvlAtGa~~p~~l 291 (1025)
T 1gte_A 238 ------YDVVNF-----------EIELMKDLGVKIICGKSLSE-------NEITL--NTLKEEGYKAAFIGIGLPEPKTD 291 (1025)
T ss_dssp ------HHHHHH-----------HHHHHHTTTCEEEESCCBST-------TSBCH--HHHHHTTCCEEEECCCCCEECCC
T ss_pred ------HHHHHH-----------HHHHHHHCCcEEEcccEecc-------ceEEh--hhcCccCCCEEEEecCCCCCCCC
Confidence 011111 13456778999988876521 12222 22345789999999999 47765
Q ss_pred CCC-cCC-CceEecchhhhc----------------cccCCCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCC-cCCC
Q psy9583 548 PGV-KFD-ENLILSNKGALE----------------MINVPKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSS-NFLN 607 (866)
Q Consensus 548 p~~-~~~-~~~~~t~~~~~~----------------~~~~~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~-~~l~ 607 (866)
+.+ +.. ...+++..+++. +...+++|+|||||++|+|+|..+.++|. +|+++++.+ .+++
T Consensus 292 ~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~ 371 (1025)
T 1gte_A 292 DIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR 371 (1025)
T ss_dssp GGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC
T ss_pred CCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC
Confidence 432 222 245676655443 12346799999999999999999999996 899999988 4567
Q ss_pred cccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEee----CCCC---ccceeEEEeccEEEEeeccccCCCC
Q psy9583 608 TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSN----KSTN---VKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 608 ~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~----~~g~---~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+++++ +.+++.||++++++.+.++..+++.+. +.+.. .+|. ..++..++++|.||+|+|++|+...
T Consensus 372 ~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~ 446 (1025)
T 1gte_A 372 AVPEEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPK 446 (1025)
T ss_dssp SCHHHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHH
T ss_pred CCHHHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchh
Confidence 776664 457788999999999999987555442 33321 1231 0122357999999999999875433
Q ss_pred CCccc-cCeeecCCCcEEeCC-CCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC---CCCCCCCccEEEEcc
Q psy9583 680 LNIDK-IGLKVNENNFIIVND-NCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK---HSINFNALPFVIYTF 754 (866)
Q Consensus 680 l~l~~-~gl~~~~~G~i~Vd~-~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~~~ 754 (866)
+ ++. .|++++++|+|.||+ ++||++|+|||+|||++++.+++.|+.||+.||++|.+.. ...++...|.+.|+.
T Consensus 447 l-~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~ 525 (1025)
T 1gte_A 447 V-KEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFY 525 (1025)
T ss_dssp H-HHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCC
T ss_pred h-hhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccc
Confidence 3 333 589999899999997 8999999999999999989999999999999999997421 122344556666777
Q ss_pred CceeeeecCHH
Q psy9583 755 PEIASVGKTEQ 765 (866)
Q Consensus 755 ~~~a~vGl~e~ 765 (866)
|+++.++++.+
T Consensus 526 ~ev~~v~ls~~ 536 (1025)
T 1gte_A 526 TPVDLVDISVE 536 (1025)
T ss_dssp CGGGGCCCCEE
T ss_pred cccccccceee
Confidence 77766665543
No 86
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=8.3e-30 Score=289.95 Aligned_cols=295 Identities=18% Similarity=0.200 Sum_probs=205.1
Q ss_pred cccccceeeecCCccHHHHHHHHHH---CCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQ---LGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEY 463 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~---~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~ 463 (866)
|+.++||+|||||+||++||..|++ .|++|+|||+.+ .+. ..|..... . .
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~------~~~-------~~~~~~~~--------~------~ 53 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND------YFQ-------FVPSNPWV--------G------V 53 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS------EEE-------CGGGHHHH--------H------H
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC------CCc-------ccCCcccc--------c------c
Confidence 3335799999999999999999999 799999999972 110 11111000 0 0
Q ss_pred CccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCC
Q psy9583 464 GINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSK 543 (866)
Q Consensus 464 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~ 543 (866)
+.. +. +.+...+..++++.+++++.+.+..++. ..+.+.+ ++++++.||+||+|||+.
T Consensus 54 g~~------~~-----------~~~~~~l~~~~~~~gv~~~~~~v~~id~---~~~~V~~--~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 54 GWK------ER-----------DDIAFPIRHYVERKGIHFIAQSAEQIDA---EAQNITL--ADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp TSS------CH-----------HHHEEECHHHHHTTTCEEECSCEEEEET---TTTEEEE--TTSCEEECSEEEECCCCE
T ss_pred Ccc------CH-----------HHHHHHHHHHHHHCCCEEEEeEEEEEEc---CCCEEEE--CCCCEEECCEEEECCCCC
Confidence 000 00 1111223455677899999887776655 3344444 567789999999999999
Q ss_pred CcCCCCCcCCC--c---eEecchhhhcccc------CCCeEEEECCcHH----H--HHHH----HHHHhcCCc-----EE
Q psy9583 544 ARSFPGVKFDE--N---LILSNKGALEMIN------VPKKLCIIGAGVI----G--LEIG----SIWRRLGSE-----VT 597 (866)
Q Consensus 544 p~~~p~~~~~~--~---~~~t~~~~~~~~~------~~~~vvVIGgG~~----g--lE~A----~~l~~~g~~-----Vt 597 (866)
|..++.++... . .+.+..++..+.. ..++++|||+|.. | +|+| ..+.+.|.+ |+
T Consensus 112 ~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vt 191 (437)
T 3sx6_A 112 LAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFT 191 (437)
T ss_dssp ECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEE
T ss_pred cCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEE
Confidence 87543333221 1 2345555444321 1456788888554 3 7777 666677875 99
Q ss_pred EEecCCcCC----CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 598 ILEMSSNFL----NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 598 li~~~~~~l----~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
++++.+.+. +.+ ++....+++.|++.||++++++.|++++. +++.+.....+|. ..+..++++|.+++++|+
T Consensus 192 lv~~~~~~~~~~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~-~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 192 FITSEPYIGHLGIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGE-TIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp EEESSSSTTCTTTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSC-EEEEEEEECSEEEEECCE
T ss_pred EEcCCccccccccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCc-cccceEEEEeEEEEcCCC
Confidence 999998873 333 35788899999999999999999999974 3444433223332 111347999999999999
Q ss_pred ccCCCCCCccccCeeecCCCcEEeCCCCCC-CCCCEEEecccCCC------------CCcHHHHHHHHHHHHHHHhC
Q psy9583 674 IPNTNNLNIDKIGLKVNENNFIIVNDNCET-NIPNIYAIGDVVRG------------PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 674 ~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~T-s~~~VyA~GD~a~~------------~~~~~~A~~~g~~aa~~i~g 737 (866)
+|+..+ .+..++ .+++|+|.||+++|| ++|||||+|||+.. |++++.|..||++||+||..
T Consensus 268 ~~~~~~--~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 268 KGVPAV--AGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp ECCHHH--HTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCchhh--hccccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 887654 233566 577899999999998 99999999999973 56899999999999999973
No 87
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=3.8e-28 Score=277.68 Aligned_cols=302 Identities=15% Similarity=0.164 Sum_probs=202.5
Q ss_pred cceeeecCCccHHHHHHHHHH---CCCe---EEEEeccCCCcccccCCCcccee---ccccchhHHHhhHHHHHHhhhhh
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQ---LGFK---TACIDEWKDNEENFALGGTCTNV---GCIPSKALLQTSHSFENVKNSFF 461 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~---~g~~---V~liek~~~~~~~~~~GG~~~~~---g~~P~~~~~~~~~~~~~~~~~~~ 461 (866)
+||+|||||+||++||..|++ .|++ |+|||+. +.+||+|.+. ||.|...... ...+..+..+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~------~~~GG~w~~~~~~g~~~~g~~~~-~~~y~~l~~~~~ 75 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQ------ADWGGQWNYTWRTGLDENGEPVH-SSMYRYLWSNGP 75 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSS------SSSCGGGSCCSCCSBCTTSSBCC-CCCCTTCBCSSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcC------CCCCCEeecCCCCCccccCCCCc-CccccchhhcCC
Confidence 799999999999999999999 9999 9999997 6799999763 4433110000 000000000000
Q ss_pred --hcCcccc----------ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcE--EEEeEEEE-eccccC-cccEEEEEc
Q psy9583 462 --EYGINTQ----------NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIK--FFHGHAIF-TGKIQN-NFHEIQIIN 525 (866)
Q Consensus 462 --~~gi~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~--v~~g~~v~-~~~~~~-~~~~v~v~~ 525 (866)
.++++.. ........+. ..+...+++.+++ +.+++.+. ++..+. ..+.+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~ 144 (464)
T 2xve_A 76 KECLEFADYTFDEHFGKPIASYPPREVLW-----------DYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQD 144 (464)
T ss_dssp GGGTCBTTBCHHHHHSSCCCSSCBHHHHH-----------HHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEE
T ss_pred hhhcccCCCCCCcccCCCCCCCCCHHHHH-----------HHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEE
Confidence 0000000 0011122222 2234455666776 77666555 332111 123444433
Q ss_pred -CCc--eEEEecEEEEecC--CCCcCCCCCcCCC--ceEecchhhhccc-cCCCeEEEECCcHHHHHHHHHHHhcCCcEE
Q psy9583 526 -KTK--ETITAKYIIIATG--SKARSFPGVKFDE--NLILSNKGALEMI-NVPKKLCIIGAGVIGLEIGSIWRRLGSEVT 597 (866)
Q Consensus 526 -~~g--~~i~~d~lViATG--s~p~~~p~~~~~~--~~~~t~~~~~~~~-~~~~~vvVIGgG~~glE~A~~l~~~g~~Vt 597 (866)
.++ .++.||+||+||| +.|+.|+.++.+. ..++++.++.... ..+++|+|||+|.+|+|+|..|++.|.+|+
T Consensus 145 ~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~ 224 (464)
T 2xve_A 145 HTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKL 224 (464)
T ss_dssp TTTTEEEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEE
T ss_pred cCCCceEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEE
Confidence 123 6789999999999 7888665444332 2345555554433 358999999999999999999999999999
Q ss_pred EEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 598 ILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 598 li~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
++++++.+++..- ..||+++ ..|++++. ++ +.+. +|. ++++|.||+|+|++|+.
T Consensus 225 li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~--~~--V~~~--dG~------~i~~D~Vi~atG~~p~~ 278 (464)
T 2xve_A 225 ISCYRTAPMGYKW------------PENWDER--PNLVRVDT--EN--AYFA--DGS------SEKVDAIILCTGYIHHF 278 (464)
T ss_dssp EEECSSCCCCCCC------------CTTEEEC--SCEEEECS--SE--EEET--TSC------EEECSEEEECCCBCCCC
T ss_pred EEEECCCCCCCCC------------CCceEEc--CCeEEEeC--CE--EEEC--CCC------EEeCCEEEECCCCCCCC
Confidence 9999988765321 2478877 78888853 33 4454 675 78999999999999999
Q ss_pred CCCCccccCeeecCCCcEEeCCC---CCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCC
Q psy9583 678 NNLNIDKIGLKVNENNFIIVNDN---CETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQK 739 (866)
Q Consensus 678 ~~l~l~~~gl~~~~~G~i~Vd~~---l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~ 739 (866)
++|. +.+++.++++|++ +|.+ ++|+.|+|||+|||+.. ..++.|..||+.+|+++.|..
T Consensus 279 ~~l~-~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 279 PFLN-DDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp TTBC-TTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHHTTSS
T ss_pred CCcC-cccccccCCCccc-ccccceEecCCCCCEEEEeCcccc-cchHHHHHHHHHHHHHHcCCC
Confidence 9863 3468888766565 4533 57999999999999864 578999999999999999863
No 88
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.96 E-value=1.5e-29 Score=286.97 Aligned_cols=287 Identities=20% Similarity=0.205 Sum_probs=193.5
Q ss_pred cceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++|||||||+||++||.+|++.+ ++|+|||++++ . ...|.. +.-. ...+...
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~------~-------~~~p~l--------~~v~-----~g~~~~~ 56 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY------F-------GFTPAF--------PHLA-----MGWRKFE 56 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE------E-------ECGGGH--------HHHH-----HTCSCGG
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC------C-------ccCccH--------HHHh-----cCCCCHH
Confidence 57999999999999999999875 78999998731 1 011110 0000 0011111
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC-C
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS-F 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~-~ 547 (866)
....+ +..++++.+|+++.+++..+|. +.+++.+ ++|+++.||+||||||+++.. +
T Consensus 57 ~i~~~------------------~~~~~~~~gv~~i~~~v~~Id~---~~~~V~~--~~g~~i~YD~LViAtG~~~~~~i 113 (430)
T 3hyw_A 57 DISVP------------------LAPLLPKFNIEFINEKAESIDP---DANTVTT--QSGKKIEYDYLVIATGPKLVFGA 113 (430)
T ss_dssp GSEEE------------------STTTGGGGTEEEECSCEEEEET---TTTEEEE--TTCCEEECSEEEECCCCEEECCS
T ss_pred Hhhhc------------------HHHHHHHCCcEEEEeEEEEEEC---CCCEEEE--CCCCEEECCEEEEeCCCCccCCc
Confidence 11111 1224566799999998877766 4455544 677899999999999997541 2
Q ss_pred CCCcCCCceEecchhhhcccc------CCCeEEEECCcH------HHHHH----HHHHHhcC----CcEEEEecCCcCC-
Q psy9583 548 PGVKFDENLILSNKGALEMIN------VPKKLCIIGAGV------IGLEI----GSIWRRLG----SEVTILEMSSNFL- 606 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~~~------~~~~vvVIGgG~------~glE~----A~~l~~~g----~~Vtli~~~~~~l- 606 (866)
|+.......+.+.+++.++.+ ..+.++|+||+. .+.|+ +..+.+.| .+|++++..+.+.
T Consensus 114 ~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~ 193 (430)
T 3hyw_A 114 EGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGH 193 (430)
T ss_dssp BTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTC
T ss_pred cCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhh
Confidence 332222233445555543321 133455555542 22344 34455555 4688888877653
Q ss_pred --CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccc
Q psy9583 607 --NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDK 684 (866)
Q Consensus 607 --~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~ 684 (866)
+..++...+.+++.|+++||++++++.|++++. +.+ .++..+|. ..++++|.+++++|++|+... ..
T Consensus 194 ~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~~--~~~~~~g~----~~~i~~d~vi~~~G~~~~~~~---~~ 262 (430)
T 3hyw_A 194 FGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DKV--IYEDLNGN----THEVPAKFTMFMPSFQGPEVV---AS 262 (430)
T ss_dssp TTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SEE--EEECTTSC----EEEEECSEEEEECEEECCHHH---HT
T ss_pred ccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--Cce--EEEeeCCC----ceEeecceEEEeccCCCchHH---Hh
Confidence 345677788899999999999999999999864 333 34433443 458999999999999997432 33
Q ss_pred c--CeeecCCCcEEeCCCCC-CCCCCEEEecccCCC------------CCcHHHHHHHHHHHHHHHhC
Q psy9583 685 I--GLKVNENNFIIVNDNCE-TNIPNIYAIGDVVRG------------PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 685 ~--gl~~~~~G~i~Vd~~l~-Ts~~~VyA~GD~a~~------------~~~~~~A~~~g~~aa~~i~g 737 (866)
+ .+..+.+|+|.||++|| |++|||||+|||+.. |++++.|.+||+++|+||+.
T Consensus 263 ~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 263 AGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 3 34555678899999999 899999999999963 56889999999999999974
No 89
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=1.2e-29 Score=288.70 Aligned_cols=287 Identities=16% Similarity=0.196 Sum_probs=201.9
Q ss_pred ccceeeecCCccHHHHHHHHHH-C------CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhh
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-L------GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFE 462 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-~------g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~ 462 (866)
.+||+||||||||++||..|++ . |++|+|||+. +.+||.| +.||.|.+...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~------~~~gg~~-~~gv~p~~~~~--------------- 60 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEML------PTPWGLV-RSGVAPDHPKI--------------- 60 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESS------SSCSTHH-HHTSCTTCTGG---------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecC------CCCCCcc-ccccCCCCCCH---------------
Confidence 4899999999999999999999 7 9999999997 5678877 34555532110
Q ss_pred cCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCC
Q psy9583 463 YGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGS 542 (866)
Q Consensus 463 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs 542 (866)
.. +...+..++++.+++++.+.. ++ +.+.+ +++ .+.||+||+|||+
T Consensus 61 ------------~~-----------~~~~~~~~~~~~~v~~~~~v~--v~------~~v~~--~~~-~~~~d~lViAtG~ 106 (456)
T 1lqt_A 61 ------------KS-----------ISKQFEKTAEDPRFRFFGNVV--VG------EHVQP--GEL-SERYDAVIYAVGA 106 (456)
T ss_dssp ------------GG-----------GHHHHHHHHTSTTEEEEESCC--BT------TTBCH--HHH-HHHSSEEEECCCC
T ss_pred ------------HH-----------HHHHHHHHHhcCCCEEEeeEE--EC------CEEEE--CCC-eEeCCEEEEeeCC
Confidence 00 011123345677888887632 21 22222 223 4789999999999
Q ss_pred C-CcCCCCCcCCCceEecchhhh-----------cccc-CCCeEEEECCcHHHHHHHHHHHhc-----------------
Q psy9583 543 K-ARSFPGVKFDENLILSNKGAL-----------EMIN-VPKKLCIIGAGVIGLEIGSIWRRL----------------- 592 (866)
Q Consensus 543 ~-p~~~p~~~~~~~~~~t~~~~~-----------~~~~-~~~~vvVIGgG~~glE~A~~l~~~----------------- 592 (866)
. |+.++.++.+...+++..++. ++.. .+++++|||+|++|+|+|..|.+.
T Consensus 107 ~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l 186 (456)
T 1lqt_A 107 QSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESL 186 (456)
T ss_dssp CEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHH
Confidence 7 565444443334566665542 1211 478999999999999999999974
Q ss_pred ---C-CcEEEEecCCcCCCcccH-------------------HH------------------HHHHHHHHHH------cC
Q psy9583 593 ---G-SEVTILEMSSNFLNTVDE-------------------EI------------------AKKAFHLLNK------QG 625 (866)
Q Consensus 593 ---g-~~Vtli~~~~~~l~~~d~-------------------~~------------------~~~l~~~l~~------~G 625 (866)
| .+|+++.|++.+...|++ ++ .+.+.+.+++ +|
T Consensus 187 ~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 266 (456)
T 1lqt_A 187 RPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRR 266 (456)
T ss_dssp TTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEE
T ss_pred HHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCce
Confidence 5 489999998876543321 11 2344455555 79
Q ss_pred CEEEeCceEEEEEEcCCeEEEEEee----CCC------CccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcE
Q psy9583 626 LNIILNTKIHDIKINKENVLINYSN----KST------NVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFI 695 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~v~~~~----~~g------~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 695 (866)
|++++++.+.++..++....+.+.. .++ ...++..++++|.|++|+|++|+. + .+++++++|+|
T Consensus 267 v~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-----~gl~~d~~g~i 340 (456)
T 1lqt_A 267 MVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-----PGLPFDDQSGT 340 (456)
T ss_dssp EEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-----TTSCCBTTTTB
T ss_pred EEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-----CCCcccCCCCe
Confidence 9999999999998653211133321 011 001223579999999999999998 2 36778888899
Q ss_pred EeCCCCC-CCCCCEEEecccCCCCC-cHHHHHHHHHHHHHHHhCC
Q psy9583 696 IVNDNCE-TNIPNIYAIGDVVRGPM-LAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 696 ~Vd~~l~-Ts~~~VyA~GD~a~~~~-~~~~A~~~g~~aa~~i~g~ 738 (866)
.+|+++| |++|+|||+|||+.+|. .+..|+.+|+.+|.+|++.
T Consensus 341 ~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~ 385 (456)
T 1lqt_A 341 IPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKN 385 (456)
T ss_dssp CCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHH
T ss_pred eECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 9999999 89999999999997665 5778999999999999753
No 90
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=3.2e-29 Score=285.50 Aligned_cols=287 Identities=11% Similarity=0.184 Sum_probs=201.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
.+||+|||||+||++||..|++.| ++|+|||+. +.+||.+ +.+|.|.+...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~------~~~gg~~-~~g~~p~~~~~-------------------- 58 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQ------LVPFGLV-RFGVAPDHPEV-------------------- 58 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSS------SSSCTHH-HHTSCTTCGGG--------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCC------CcCCcee-ecccCCCCccH--------------------
Confidence 489999999999999999999998 999999997 5566644 34454432110
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCC-cC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA-RS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p-~~ 546 (866)
..+. ..+..++++.+++++.+..+ . ..+.+ ++ ..+.||+||+|||+.| +.
T Consensus 59 -------~~~~-----------~~~~~~~~~~gv~~~~~~~v--~------~~V~~--~~-~~~~~d~lVlAtGs~~~~~ 109 (460)
T 1cjc_A 59 -------KNVI-----------NTFTQTARSDRCAFYGNVEV--G------RDVTV--QE-LQDAYHAVVLSYGAEDHQA 109 (460)
T ss_dssp -------GGHH-----------HHHHHHHTSTTEEEEBSCCB--T------TTBCH--HH-HHHHSSEEEECCCCCEECC
T ss_pred -------HHHH-----------HHHHHHHHhCCcEEEeeeEE--e------eEEEe--cc-ceEEcCEEEEecCcCCCCC
Confidence 0011 11234566778888776433 1 11222 12 2468999999999996 55
Q ss_pred CCCCcCCCceEecchhhhcc----------c-c-CCCeEEEECCcHHHHHHHHHHH--------------------hcCC
Q psy9583 547 FPGVKFDENLILSNKGALEM----------I-N-VPKKLCIIGAGVIGLEIGSIWR--------------------RLGS 594 (866)
Q Consensus 547 ~p~~~~~~~~~~t~~~~~~~----------~-~-~~~~vvVIGgG~~glE~A~~l~--------------------~~g~ 594 (866)
++.++.+...+++..++..+ . . .+++++|||+|++|+|+|..|. +.|.
T Consensus 110 ~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~ 189 (460)
T 1cjc_A 110 LDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRV 189 (460)
T ss_dssp CCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCC
T ss_pred CCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCC
Confidence 55554444557766655321 1 1 3789999999999999999999 5677
Q ss_pred -cEEEEecCCcCC--------------Ccc-------------------cHH---HHHHHHHHHHH--------------
Q psy9583 595 -EVTILEMSSNFL--------------NTV-------------------DEE---IAKKAFHLLNK-------------- 623 (866)
Q Consensus 595 -~Vtli~~~~~~l--------------~~~-------------------d~~---~~~~l~~~l~~-------------- 623 (866)
+|+++.|++.+. +.. +.. +.+.+.+.+++
T Consensus 190 ~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 269 (460)
T 1cjc_A 190 KTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASAS 269 (460)
T ss_dssp CEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCS
T ss_pred cEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCC
Confidence 799999988652 211 010 23444455555
Q ss_pred cCCEEEeCceEEEEEEcC-C-eE-EEEEeeC---C--C--C--ccceeEEEeccEEEEeeccccCCCCCCccccCe-eec
Q psy9583 624 QGLNIILNTKIHDIKINK-E-NV-LINYSNK---S--T--N--VKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGL-KVN 690 (866)
Q Consensus 624 ~GV~i~~~~~v~~i~~~~-~-~~-~v~~~~~---~--g--~--~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl-~~~ 690 (866)
+||++++++.+.++..++ + .+ .+.+... . + . ..++..++++|.|++|+|++|+. + .|+ +++
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d 343 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I-----DPSVPFD 343 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C-----CTTSCCB
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C-----CCCcccc
Confidence 899999999999998763 3 22 2333210 0 0 0 01223589999999999999997 2 467 788
Q ss_pred CCCcEEeCCCCCCC-CCCEEEecccCCCCC-cHHHHHHHHHHHHHHHhCC
Q psy9583 691 ENNFIIVNDNCETN-IPNIYAIGDVVRGPM-LAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 691 ~~G~i~Vd~~l~Ts-~~~VyA~GD~a~~~~-~~~~A~~~g~~aa~~i~g~ 738 (866)
++|+|.||+++||+ +|+|||+|||+.+|. .+..|+.+|+.+|.+|++.
T Consensus 344 ~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~ 393 (460)
T 1cjc_A 344 PKLGVVPNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQD 393 (460)
T ss_dssp TTTTBCCEETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeECCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHH
Confidence 88889999999999 799999999997665 5789999999999999753
No 91
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.96 E-value=7.6e-28 Score=271.66 Aligned_cols=284 Identities=18% Similarity=0.219 Sum_probs=204.9
Q ss_pred cceeeecCCccHHHHHHHHHH---CCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQ---LGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~---~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
+||+|||||+||+++|..|++ .|++|+|||+++ .++... +.+. ........
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~------~~~~~~----~~~~----------------~~~~~~~~ 55 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR------FSYFRP----ALPH----------------VAIGVRDV 55 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS------EEEECC----SSCC----------------CCSSCCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC------Cceecc----chhh----------------cccCCcCH
Confidence 579999999999999999999 899999999973 221100 0110 00000000
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCc--eEEEecEEEEecCCCCc
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~ 545 (866)
.. +...+...+++.+++++.+....++. ..+.+.+....+ .++.||+||+|||+.|.
T Consensus 56 ~~------------------~~~~~~~~~~~~gv~~~~~~v~~i~~---~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 56 DE------------------LKVDLSEALPEKGIQFQEGTVEKIDA---KSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CC------------------EEEEHHHHTGGGTCEEEECEEEEEET---TTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred HH------------------HHHHHHHHHhhCCeEEEEeeEEEEeC---CCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 00 11123445667799999986666654 345666654332 45999999999999887
Q ss_pred CCCCCcCC--CceEecchhhhcccc----CCCeEEEECCcH-------------------------HHHHHH----HHHH
Q psy9583 546 SFPGVKFD--ENLILSNKGALEMIN----VPKKLCIIGAGV-------------------------IGLEIG----SIWR 590 (866)
Q Consensus 546 ~~p~~~~~--~~~~~t~~~~~~~~~----~~~~vvVIGgG~-------------------------~glE~A----~~l~ 590 (866)
.++.++.. ...+.+.++...+.. ..++++|||+|+ .++|+| ..+.
T Consensus 115 ~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~ 194 (409)
T 3h8l_A 115 TELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFK 194 (409)
T ss_dssp GGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHH
T ss_pred ccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHH
Confidence 54333222 223334444433322 336677999992 466776 4566
Q ss_pred hcCC----cEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 591 RLGS----EVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 591 ~~g~----~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
+.|. +|+++++.+ +++.+++++.+.+.+.|++.||++++++.|++++.+ + +.+. +|+ ++++|.
T Consensus 195 ~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~--~g~------~~~~D~ 261 (409)
T 3h8l_A 195 KKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDE--KGN------TIPADI 261 (409)
T ss_dssp TTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEET--TSC------EEECSE
T ss_pred HcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEEC--CCC------EEeeeE
Confidence 7774 899999988 788899999999999999999999999999999753 2 4443 665 899999
Q ss_pred EEEeeccccCCCCCCcccc--CeeecCCCcEEeCCCCCC-CCCCEEEecccCC--CCCcHHHHHHHHHHHHHHHhCC
Q psy9583 667 LLIAIGRIPNTNNLNIDKI--GLKVNENNFIIVNDNCET-NIPNIYAIGDVVR--GPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 667 vi~a~G~~p~~~~l~l~~~--gl~~~~~G~i~Vd~~l~T-s~~~VyA~GD~a~--~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
+++++|++|+. + ++++ ++ .+++|+|.||+++|| ++|||||+|||++ .+++++.|..||++||+||.+.
T Consensus 262 vi~a~G~~~~~-~--l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 262 TILLPPYTGNP-A--LKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp EEEECCEECCH-H--HHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCccH-H--HHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999984 3 4555 44 356899999999999 8999999999996 4789999999999999999753
No 92
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=5.1e-28 Score=298.77 Aligned_cols=284 Identities=16% Similarity=0.168 Sum_probs=203.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.++||+||||||||++||..|++.|++|+|||++ +.+||+|.+ | | +..+. +..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~------~~~GG~~~~--~-~-k~~i~---------------~~~-- 179 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDER------AEAGGTLLD--T-A-GEQID---------------GMD-- 179 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSSGGGGG--S-S-CCEET---------------TEE--
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC------CCCCceecc--C-C-ccccC---------------CCC--
Confidence 3589999999999999999999999999999997 678999862 2 2 10000 000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEE-eccccCcccEE---------EEEc------CCceEE
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIF-TGKIQNNFHEI---------QIIN------KTKETI 531 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~-~~~~~~~~~~v---------~v~~------~~g~~i 531 (866)
..+| . ..+...+.+ .+++++.++.+. ++. ..... .+.. .++..+
T Consensus 180 --~~~~---~-----------~~~~~~l~~~~~v~~~~~~~V~~i~~---~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i 240 (965)
T 2gag_A 180 --SSAW---I-----------EQVTSELAEAEETTHLQRTTVFGSYD---ANYLIAAQRRTVHLDGPSGPGVSRERIWHI 240 (965)
T ss_dssp --HHHH---H-----------HHHHHHHHHSTTEEEESSEEEEEEET---TTEEEEEEECSTTCSSCCCTTCCSEEEEEE
T ss_pred --HHHH---H-----------HHHHHHHhhcCCcEEEeCCEEEeeec---CCceeeeEeecccccccccccCCCCceEEE
Confidence 0001 0 011222334 489988877665 322 11111 1111 112479
Q ss_pred EecEEEEecCCCCcCCCCCcCCCceEecchhhhcc----c-cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC
Q psy9583 532 TAKYIIIATGSKARSFPGVKFDENLILSNKGALEM----I-NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL 606 (866)
Q Consensus 532 ~~d~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~----~-~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l 606 (866)
.||+||||||+.|+.++.++.+...+++...+..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.++
T Consensus 241 ~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 241 RAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp EEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred ECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 99999999999988776655555567766443221 1 235899999999999999999999999999999998875
Q ss_pred CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc-CCeE-EEEEee--CCCCccceeEEEeccEEEEeeccccCCCCCCc
Q psy9583 607 NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN-KENV-LINYSN--KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNI 682 (866)
Q Consensus 607 ~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~-~v~~~~--~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l 682 (866)
+. .+.|++.||++++++.++++..+ ++.+ .+.+.+ ..+. .++..++++|.|++++|++|+++++
T Consensus 321 ~~---------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~-~G~~~~i~~D~Vv~a~G~~P~~~l~-- 388 (965)
T 2gag_A 321 AA---------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARE-LGGTQRFEADVLAVAGGFNPVVHLH-- 388 (965)
T ss_dssp HH---------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCC-EEEEEEEECSEEEEECCEEECCHHH--
T ss_pred hh---------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCC-CCceEEEEcCEEEECCCcCcChHHH--
Confidence 31 56788999999999999999874 3332 455543 1100 0113589999999999999999873
Q ss_pred cccCeeecCCCcEEeCCCCC-----CCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 683 DKIGLKVNENNFIIVNDNCE-----TNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 683 ~~~gl~~~~~G~i~Vd~~l~-----Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+. .+|+|.+|++++ |++|+|||+|||++.+.+. .|+.||++||.+|++
T Consensus 389 ~~------~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 389 SQ------RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp HH------TTCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHH-HHHHHHHHHHHHHHH
T ss_pred Hh------CCCcEEEcCcccccccCCCCCCEEEEEecCCchhHH-HHHHHHHHHHHHHHH
Confidence 32 246799999887 8999999999999877665 899999999999975
No 93
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.95 E-value=2.2e-28 Score=277.75 Aligned_cols=284 Identities=19% Similarity=0.197 Sum_probs=198.6
Q ss_pred cceeeecCCccHHHHHHHHHH--CCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQ--LGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~--~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
+||+|||||+||+++|..|++ .|++|+|||++ +.+++. |.... .... .....
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~------~~~~~~-------~~~~~--------~~~g-----~~~~~ 56 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR------PYFGFT-------PAFPH--------LAMG-----WRKFE 56 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS------SEEECG-------GGHHH--------HHHT-----CSCGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC------CCCCcC-------CCcch--------hccC-----ccCHH
Confidence 789999999999999999999 78999999997 333321 11000 0000 00000
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
. +...+..++++.+++++.+....++. ..+.+.+ +++.++.||+||+|||+.|..+
T Consensus 57 ~------------------~~~~~~~~~~~~gv~~~~~~v~~id~---~~~~v~~--~~g~~i~~d~liiAtG~~~~~p- 112 (430)
T 3h28_A 57 D------------------ISVPLAPLLPKFNIEFINEKAESIDP---DANTVTT--QSGKKIEYDYLVIATGPKLVFG- 112 (430)
T ss_dssp G------------------SEEESTTTGGGGTEEEECSCEEEEET---TTTEEEE--TTCCEEECSEEEECCCCEEECC-
T ss_pred H------------------HHHHHHHHHHhcCCEEEEEEEEEEEC---CCCEEEE--CCCcEEECCEEEEcCCcccccC-
Confidence 0 01112223556799999887666655 3344444 5667899999999999987754
Q ss_pred CCcC--CCceEecchhhhcccc------CCCeEEEECCcHHH------HHHH----HHHHhcC----CcEEEEecCCcCC
Q psy9583 549 GVKF--DENLILSNKGALEMIN------VPKKLCIIGAGVIG------LEIG----SIWRRLG----SEVTILEMSSNFL 606 (866)
Q Consensus 549 ~~~~--~~~~~~t~~~~~~~~~------~~~~vvVIGgG~~g------lE~A----~~l~~~g----~~Vtli~~~~~~l 606 (866)
+.+. ....+.+.++...+.. ..++++|||+|..+ +|+| ..+.+.| .+|+++++.+.+.
T Consensus 113 g~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~ 192 (430)
T 3h28_A 113 AEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLG 192 (430)
T ss_dssp SBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTT
T ss_pred CCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcccc
Confidence 3321 1123445555544322 14567888987543 7777 5555667 4799999988763
Q ss_pred ----CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCc
Q psy9583 607 ----NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNI 682 (866)
Q Consensus 607 ----~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l 682 (866)
..+ ++..+.+++.|++.||++++++.|++++.+ . +.++..++. ..++++|.+++++|++|+..+
T Consensus 193 ~~~l~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~--~--v~~~~~~~~----g~~i~~D~vv~a~G~~~~~~l--- 260 (430)
T 3h28_A 193 HFGVGGI-GASKRLVEDLFAERNIDWIANVAVKAIEPD--K--VIYEDLNGN----THEVPAKFTMFMPSFQGPEVV--- 260 (430)
T ss_dssp CTTTTCS-TTHHHHHHHHHHHTTCEEECSCEEEEECSS--E--EEEECTTSC----EEEEECSEEEEECEEECCHHH---
T ss_pred ccccCcc-hHHHHHHHHHHHHCCCEEEeCCEEEEEeCC--e--EEEEecCCC----ceEEeeeEEEECCCCccchhH---
Confidence 222 357888999999999999999999999643 3 334421221 348999999999999987543
Q ss_pred cc--cCeeecCCC-cEEeCCCCCC-CCCCEEEecccCCC------------CCcHHHHHHHHHHHHHHHhC
Q psy9583 683 DK--IGLKVNENN-FIIVNDNCET-NIPNIYAIGDVVRG------------PMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 683 ~~--~gl~~~~~G-~i~Vd~~l~T-s~~~VyA~GD~a~~------------~~~~~~A~~~g~~aa~~i~g 737 (866)
.+ .++ .+++| +|.||+++|| ++|||||+|||+.. |++++.|..||++||+||..
T Consensus 261 ~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 261 ASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp HTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred hhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 33 467 57789 9999999998 99999999999973 56899999999999999974
No 94
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.95 E-value=9.5e-29 Score=278.37 Aligned_cols=284 Identities=14% Similarity=0.121 Sum_probs=197.7
Q ss_pred cceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++|||||||+||++||.+|++.+ .+|+|||+++ .... |...+.+. ....+..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~------~~~~------~p~~~~v~--------------~g~~~~~ 56 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE------TYYT------CYMSNEVI--------------GGDRELA 56 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS------SEEC------STTHHHHH--------------HTSSCGG
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC------CCCC------ccCHHHHh--------------cCCCCHH
Confidence 57999999999999999999875 6899999862 1111 10000000 0000111
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSFP 548 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~p 548 (866)
....++. .+.+.|++++.+++..++. +.+.+. +.++.++.||+||+|||+.+..++
T Consensus 57 ~~~~~~~-------------------~~~~~gv~~i~~~v~~id~---~~~~v~--~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 57 SLRVGYD-------------------GLRAHGIQVVHDSALGIDP---DKKLVK--TAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp GGEECSH-------------------HHHHTTCEEECSCEEEEET---TTTEEE--ETTSCEEECSEEEECCCEEECGGG
T ss_pred HHhhCHH-------------------HHHHCCCEEEEeEEEEEEc---cCcEEE--ecccceeecceeeeccCCccccCC
Confidence 1111111 2345799999998887766 334444 467789999999999999877543
Q ss_pred CCcCCC------ce-Eecchhhhccc------cCCCeEEEECCc----------HHHHHHHHHHHhcC--CcEEEEecCC
Q psy9583 549 GVKFDE------NL-ILSNKGALEMI------NVPKKLCIIGAG----------VIGLEIGSIWRRLG--SEVTILEMSS 603 (866)
Q Consensus 549 ~~~~~~------~~-~~t~~~~~~~~------~~~~~vvVIGgG----------~~glE~A~~l~~~g--~~Vtli~~~~ 603 (866)
.++... .+ ..+.++...+. .....+++.+++ ..+++++..+.+.+ .+|+++++.+
T Consensus 113 i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~ 192 (401)
T 3vrd_B 113 IEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQ 192 (401)
T ss_dssp SBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred ccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccc
Confidence 333221 11 11233332221 123334443321 24567777777665 6799999988
Q ss_pred cCC--CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCC
Q psy9583 604 NFL--NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLN 681 (866)
Q Consensus 604 ~~l--~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~ 681 (866)
.+. +.+++.+.+.+.+.+++.||++++++.+..++.+.+...+.+. +|+ ++++|.+++++|.+|+. +
T Consensus 193 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~--~g~------~i~~D~vi~~~g~~~~~-~-- 261 (401)
T 3vrd_B 193 TFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETS--FGE------TFKAAVINLIPPQRAGK-I-- 261 (401)
T ss_dssp SCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEET--TSC------EEECSEEEECCCEEECH-H--
T ss_pred cccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcC--CCc------EEEeeEEEEecCcCCch-h--
Confidence 874 3578888888888899999999999999998877666555554 676 89999999999999974 3
Q ss_pred ccccCeeecCCCcEEeCCC-CC-CCCCCEEEecccCCC---CCcHHHHHHHHHHHHHHHh
Q psy9583 682 IDKIGLKVNENNFIIVNDN-CE-TNIPNIYAIGDVVRG---PMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 682 l~~~gl~~~~~G~i~Vd~~-l~-Ts~~~VyA~GD~a~~---~~~~~~A~~~g~~aa~~i~ 736 (866)
++++++. +++|+|.||++ || |++|||||+|||+.. |++++.|.+||+++|+||+
T Consensus 262 ~~~~gl~-~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 262 AQSASLT-NDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp HHHTTCC-CTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred Hhhcccc-ccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 5777884 67899999987 65 899999999999863 5789999999999999997
No 95
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.95 E-value=1.8e-27 Score=273.32 Aligned_cols=321 Identities=12% Similarity=0.152 Sum_probs=201.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCC-----CeEEEEeccCCCcccccCCCccceeccc-cchhHHHhhHHHHHHhhhhhhc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG-----FKTACIDEWKDNEENFALGGTCTNVGCI-PSKALLQTSHSFENVKNSFFEY 463 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g-----~~V~liek~~~~~~~~~~GG~~~~~g~~-P~~~~~~~~~~~~~~~~~~~~~ 463 (866)
.+||+|||||+||+++|..|++.| .+|+|||+. +.+|... ++. |...+. .. . ...+...
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~------~~~g~~~---~~~~~~~~~~-~~-~----~~~l~~~ 94 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQ------GDYRWHG---NTLVSQSELQ-IS-F----LKDLVSL 94 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESC------SSCCSSG---GGCCSSCBCS-SC-T----TSSSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecC------CCCCCcC---CCCCCCCcCC-cc-h----hhccccc
Confidence 589999999999999999999999 999999998 3333110 110 000000 00 0 0000000
Q ss_pred CccccccccCHHHHHHHHHH------------HHHhhhhhHHHHHHhCCcEEEEeEEEE-ecccc--CcccEEEEEcCCc
Q psy9583 464 GINTQNVTLNLQKMLERKNN------------IIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQ--NNFHEIQIINKTK 528 (866)
Q Consensus 464 gi~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~--~~~~~v~v~~~~g 528 (866)
..+ ...+.+...+..... ....+...+....++.++++.+++.+. ++..+ ...+.+.|.+.++
T Consensus 95 ~~p--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g 172 (463)
T 3s5w_A 95 RNP--TSPYSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNA 172 (463)
T ss_dssp TCT--TCTTSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEET
T ss_pred cCC--CCCCChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecC
Confidence 000 000001000000000 001122234455666788898887665 43311 1112245554333
Q ss_pred e----EEEecEEEEecCCCCcCCCCC-cCCCc-eEecchhhhc-ccc------CCCeEEEECCcHHHHHHHHHHHhc--C
Q psy9583 529 E----TITAKYIIIATGSKARSFPGV-KFDEN-LILSNKGALE-MIN------VPKKLCIIGAGVIGLEIGSIWRRL--G 593 (866)
Q Consensus 529 ~----~i~~d~lViATGs~p~~~p~~-~~~~~-~~~t~~~~~~-~~~------~~~~vvVIGgG~~glE~A~~l~~~--g 593 (866)
. ++.||+||+|||+.|..|++. ...+. .++++.+... ... .+++|+|||+|.+|+|+|..|.+. +
T Consensus 173 ~g~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~ 252 (463)
T 3s5w_A 173 DGEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPS 252 (463)
T ss_dssp TSCEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTT
T ss_pred CCceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCC
Confidence 2 899999999999988876533 23332 3444433322 222 478999999999999999999999 9
Q ss_pred CcEEEEecCCcCCCc--------------------ccHHHHHHHHHHHHH--------------------------cCCE
Q psy9583 594 SEVTILEMSSNFLNT--------------------VDEEIAKKAFHLLNK--------------------------QGLN 627 (866)
Q Consensus 594 ~~Vtli~~~~~~l~~--------------------~d~~~~~~l~~~l~~--------------------------~GV~ 627 (866)
.+|++++|.+.+++. ++++....+.+.+.. .||+
T Consensus 253 ~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 332 (463)
T 3s5w_A 253 VQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHA 332 (463)
T ss_dssp EEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSE
T ss_pred CeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeE
Confidence 999999999987552 222223333333222 5999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccC--CCCCCccccCeeecCCCcEEeCCCCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPN--TNNLNIDKIGLKVNENNFIIVNDNCETN 704 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~--~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts 704 (866)
+++++.|++++.+++++.+.+.+. +|+ ..++++|.||+|+|++|+ .++ ++.+...+ |++.||+++++.
T Consensus 333 i~~~~~v~~v~~~~~~~~v~~~~~~~g~----~~~~~~D~Vv~AtG~~p~~~~~~--l~~l~~~~---g~i~v~~~~~~~ 403 (463)
T 3s5w_A 333 FRCMTTVERATATAQGIELALRDAGSGE----LSVETYDAVILATGYERQLHRQL--LEPLAEYL---GDHEIGRDYRLQ 403 (463)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCC----EEEEEESEEEECCCEECCC-CTT--TGGGGGGB---C--CCCTTSBCC
T ss_pred EEeCCEEEEEEecCCEEEEEEEEcCCCC----eEEEECCEEEEeeCCCCCCccch--hHHHHHHh---CCcccCcccccc
Confidence 999999999998888888877643 343 346999999999999999 555 34443332 779999999974
Q ss_pred -----CCCEEEecccCC-----CCCcHHHHHHHHHHHHHHHh
Q psy9583 705 -----IPNIYAIGDVVR-----GPMLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 705 -----~~~VyA~GD~a~-----~~~~~~~A~~~g~~aa~~i~ 736 (866)
.|+|||+|||.. .+.+...|++++++++..+-
T Consensus 404 ~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 404 TDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp BCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 567999999984 45678899999998877664
No 96
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=2.7e-28 Score=293.51 Aligned_cols=289 Identities=21% Similarity=0.227 Sum_probs=202.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
..+||+|||||+||++||..|++.|++|+|||+. +.+||.|.+..+.|.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~------~~~GG~~~~~~~~pg~~----------------------- 438 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTA------EKIGGHLNQVAALPGLG----------------------- 438 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS------SSTTTTHHHHTTSTTCG-----------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCC------CCcCCeeeecccCCChH-----------------------
Confidence 3589999999999999999999999999999997 67899886655555321
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHH--HhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCC--
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLF--KKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKA-- 544 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p-- 544 (866)
+|..+..+.... +.... ...++++..++. +..+++..+.||+||||||+.|
T Consensus 439 ----~~~~~~~~~~~~-------i~~~~~~~~~~v~i~~~~~--------------v~~~~~~~~~~d~vviAtG~~~~~ 493 (729)
T 1o94_A 439 ----EWSYHRDYRETQ-------ITKLLKKNKESQLALGQKP--------------MTADDVLQYGADKVIIATGARWNT 493 (729)
T ss_dssp ----GGHHHHHHHHHH-------HHHHHHHSTTCEEECSCCC--------------CCHHHHHTSCCSEEEECCCEEECS
T ss_pred ----HHHHHHHHHHHH-------HHHhhcccCCceEEEeCeE--------------EehhhccccCCCEEEEcCCCCccc
Confidence 111111111111 11111 123455433211 1112334578999999999984
Q ss_pred ------cCCCCCcCC--CceEecchhhhccc-cCCCeEEEEC--CcHHHHHHHHHHHhcCCcEEEEecCCcCCCc--ccH
Q psy9583 545 ------RSFPGVKFD--ENLILSNKGALEMI-NVPKKLCIIG--AGVIGLEIGSIWRRLGSEVTILEMSSNFLNT--VDE 611 (866)
Q Consensus 545 ------~~~p~~~~~--~~~~~t~~~~~~~~-~~~~~vvVIG--gG~~glE~A~~l~~~g~~Vtli~~~~~~l~~--~d~ 611 (866)
..++.++.+ ...+++..+++... ..+++|+||| ||++|+|+|..|+++|.+|+++++.+ +++. ++.
T Consensus 494 ~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~ 572 (729)
T 1o94_A 494 DGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTL 572 (729)
T ss_dssp SCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTT
T ss_pred ccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccccc
Confidence 344444433 44677777765543 3468999999 99999999999999999999999998 6542 333
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCc-------------cceeEEEeccEEEEeeccccCCC
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNV-------------KTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~-------------~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
. ...+.+.|++.||++++++.++++.. +++.+.....++.. .+...++++|.||+|+|++|+++
T Consensus 573 ~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~ 649 (729)
T 1o94_A 573 E-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECT 649 (729)
T ss_dssp C-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCH
T ss_pred c-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChH
Confidence 3 56778889999999999999999974 34444332112210 01223599999999999999988
Q ss_pred CCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCccE
Q psy9583 679 NLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQKHSINFNALPF 749 (866)
Q Consensus 679 ~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~ 749 (866)
+ ++.++ ..+|++++|++|+|||+|||++ +..+..|+.||+.||.+|.+.. .+..+|+
T Consensus 650 l--~~~l~--------~~vd~~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA~~i~~~l---~~~~~p~ 706 (729)
T 1o94_A 650 L--WNELK--------ARESEWAENDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEEAN---PQIAIPY 706 (729)
T ss_dssp H--HHHHH--------HTGGGTGGGTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTSSC---TTSCCCC
T ss_pred H--HHHHh--------hhcccccccCCCCeEEEeCccc-hhhHHHHHHHHHHHHHHhhhhc---ccCCCCe
Confidence 6 33321 1368899999999999999996 6678899999999999998653 2445565
No 97
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.95 E-value=1.6e-27 Score=271.95 Aligned_cols=304 Identities=13% Similarity=0.106 Sum_probs=196.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCC--eEEEEeccCCCcccccCCCccceeccc------cchhHH-------H-----
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGF--KTACIDEWKDNEENFALGGTCTNVGCI------PSKALL-------Q----- 448 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~--~V~liek~~~~~~~~~~GG~~~~~g~~------P~~~~~-------~----- 448 (866)
..+||+|||||++|+++|..|++.|. +|+|||+. +.+||.|.+.++. |..... .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~------~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR------GSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS------SSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC------CCCCCeecCCCCCCcccccccccccccccccccccccC
Confidence 35899999999999999999999999 99999997 6789999877652 211000 0
Q ss_pred --hhHHHHHHhh----hhhhc-Ccccc---ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCc
Q psy9583 449 --TSHSFENVKN----SFFEY-GINTQ---NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNN 517 (866)
Q Consensus 449 --~~~~~~~~~~----~~~~~-gi~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~ 517 (866)
....+..+.. .+..+ +++.. ........+..+ +..+.++.+..+.+++.+. ++. +..
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------l~~~~~~~~~~i~~~t~V~~v~~-~~~ 146 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEY-----------QRIYAQPLLPFIKLATDVLDIEK-KDG 146 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHH-----------HHHHHGGGGGGEECSEEEEEEEE-ETT
T ss_pred CccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHH-----------HHHHHHHhhCeEEeCCEEEEEEe-CCC
Confidence 0000000000 00000 11100 011112222222 3334444466676666655 322 112
Q ss_pred ccEEEEEc-CCce---EEEecEEEEecCC--CCcCCCCCcCCC------ceEecchhhhcccc-CCCeEEEECCcHHHHH
Q psy9583 518 FHEIQIIN-KTKE---TITAKYIIIATGS--KARSFPGVKFDE------NLILSNKGALEMIN-VPKKLCIIGAGVIGLE 584 (866)
Q Consensus 518 ~~~v~v~~-~~g~---~i~~d~lViATGs--~p~~~p~~~~~~------~~~~t~~~~~~~~~-~~~~vvVIGgG~~glE 584 (866)
.+.+++.. .+|. ++.||+||+|||+ .|+.|+.++... ..++++.++.+... .+++|+|||+|++|+|
T Consensus 147 ~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e 226 (447)
T 2gv8_A 147 SWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSAND 226 (447)
T ss_dssp EEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHH
T ss_pred eEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHH
Confidence 23344432 1244 7999999999998 666654443221 12555555444332 5799999999999999
Q ss_pred HHHHHHhcCCc-EEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 585 IGSIWRRLGSE-VTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 585 ~A~~l~~~g~~-Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
+|..|++.|.+ |++++|.+.+ +++.||.+ +..|+++..++.. +.+. +|. ..++
T Consensus 227 ~A~~l~~~~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~~--v~~~--dG~-----~~~~ 280 (447)
T 2gv8_A 227 LVRHLTPVAKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTTRE--IYLK--GGK-----VLSN 280 (447)
T ss_dssp HHHHHTTTSCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETTTTE--EEET--TTE-----EECC
T ss_pred HHHHHHHHhCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCCCE--EEEC--CCC-----Eecc
Confidence 99999999999 9999998876 33456664 5788888654433 4443 564 2378
Q ss_pred ccEEEEeeccccCCCC-----CCccccCeeecCCCcEEeCCCCC---CCCCCEEEecccCCCCCcHHHHHHHHHHHHHHH
Q psy9583 664 FDKLLIAIGRIPNTNN-----LNIDKIGLKVNENNFIIVNDNCE---TNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHI 735 (866)
Q Consensus 664 ~D~vi~a~G~~p~~~~-----l~l~~~gl~~~~~G~i~Vd~~l~---Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i 735 (866)
+|.||+|+|++|++++ +.....++.. ++.+.++.+.+ +++|+||++||+.... +++.|..||+.+|+++
T Consensus 281 ~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~--~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-~~~~a~~qa~~~a~~~ 357 (447)
T 2gv8_A 281 IDRVIYCTGYLYSVPFPSLAKLKSPETKLID--DGSHVHNVYQHIFYIPDPTLAFVGLALHVV-PFPTSQAQAAFLARVW 357 (447)
T ss_dssp CSEEEECCCBCCCCCCHHHHSCCSTTTCCCS--SSSSCCSEETTTEETTCTTEEESSCCBSSC-HHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCcCCCCCcccccccccCceec--CCCcccccccccccCCCCcEEEEecccccc-CchHHHHHHHHHHHHH
Confidence 9999999999999998 5311123333 45566676665 7999999999998654 7899999999999999
Q ss_pred hCCC
Q psy9583 736 SGQK 739 (866)
Q Consensus 736 ~g~~ 739 (866)
.|..
T Consensus 358 ~g~~ 361 (447)
T 2gv8_A 358 SGRL 361 (447)
T ss_dssp TTSS
T ss_pred cCCC
Confidence 9853
No 98
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=5.7e-28 Score=289.74 Aligned_cols=272 Identities=16% Similarity=0.184 Sum_probs=204.0
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
...+||+|||||+||++||..|++.|++|+|||+. +.+||.|.+..+.|.+.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~------~~~GG~~~~~~~~p~~~---------------------- 440 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAG------RDLGGRVTQESALPGLS---------------------- 440 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS------SSSCTHHHHHHTSTTCG----------------------
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecC------CCCCCEeeeccCCCchh----------------------
Confidence 44689999999999999999999999999999997 67899875443333211
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc-
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR- 545 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~- 545 (866)
++..+..+ +...+.+. +++++.++.+.. .++..+.||+||+|||+.|+
T Consensus 441 -----~~~~~~~~-----------~~~~~~~~~gv~~~~~~~v~~--------------~~~~~~~~d~lvlAtG~~~~~ 490 (690)
T 3k30_A 441 -----AWGRVKEY-----------REAVLAELPNVEIYRESPMTG--------------DDIVEFGFEHVITATGATWRT 490 (690)
T ss_dssp -----GGGHHHHH-----------HHHHHHTCTTEEEESSCCCCH--------------HHHHHTTCCEEEECCCEEECS
T ss_pred -----HHHHHHHH-----------HHHHHHHcCCCEEEECCeecH--------------HHHhhcCCCEEEEcCCCcccc
Confidence 12222222 23345555 888776643221 12345789999999999843
Q ss_pred -------CCCCCcCCCceEecchhhhccc-cCCCeEEEEC--CcHHHHHHHHHHHhcCCcEEEEecCCcCCCcc-cHHHH
Q psy9583 546 -------SFPGVKFDENLILSNKGALEMI-NVPKKLCIIG--AGVIGLEIGSIWRRLGSEVTILEMSSNFLNTV-DEEIA 614 (866)
Q Consensus 546 -------~~p~~~~~~~~~~t~~~~~~~~-~~~~~vvVIG--gG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~-d~~~~ 614 (866)
.++.++.+...+++..+..... ..+++++||| +|++|+|+|..|.+.|.+|+++++.+.+++.. ++...
T Consensus 491 ~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~ 570 (690)
T 3k30_A 491 DGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEV 570 (690)
T ss_dssp SCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCH
T ss_pred ccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhH
Confidence 4555555556778877766543 3467899999 99999999999999999999999999888754 35667
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCc
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNF 694 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~ 694 (866)
..+.+.|++.||+++++++|++++.+ ++.+.... ++. ..++++|.||+|+|++|+..++ +.++. .+.
T Consensus 571 ~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~v~~~~-~~~----~~~i~aD~VV~A~G~~p~~~l~--~~l~~----~~~ 637 (690)
T 3k30_A 571 NRIQRRLIENGVARVTDHAVVAVGAG--GVTVRDTY-ASI----ERELECDAVVMVTARLPREELY--LDLVA----RRD 637 (690)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEETT--EEEEEETT-TCC----EEEEECSEEEEESCEEECCHHH--HHHHH----HHH
T ss_pred HHHHHHHHHCCCEEEcCcEEEEEECC--eEEEEEcc-CCe----EEEEECCEEEECCCCCCChHHH--HHHhh----hhc
Confidence 88899999999999999999999743 34443321 111 3479999999999999998863 33221 221
Q ss_pred EEeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC
Q psy9583 695 IIVNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 695 i~Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
+|++|+|||+|||++ ++.+..|+.||+.||.||.+.
T Consensus 638 -------~t~~~~VyaiGD~~~-~~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 638 -------AGEIASVRGIGDAWA-PGTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp -------HTSCSEEEECGGGTS-CBCHHHHHHHHHHHHHHTTCC
T ss_pred -------ccCCCCEEEEeCCCc-hhhHHHHHHHHHHHHHHHHhh
Confidence 789999999999996 456667999999999999876
No 99
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.94 E-value=1.6e-28 Score=247.34 Aligned_cols=139 Identities=32% Similarity=0.535 Sum_probs=38.0
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCE-EecCCEEEEEecCC
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSI-VTSNQVIALIDTDI 81 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~-v~~g~~l~~~~~~~ 81 (866)
.++|+||+||++|++|+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+. |.+|++|++|+.++
T Consensus 3 ~~ei~mP~lGesm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~~~ 82 (229)
T 1zy8_K 3 PIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEG 82 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEecCCCCCCCCcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEeccC
Confidence 46899999999999999999999999999999999999999999999999999999999999997 99999999997432
Q ss_pred cccc---------ccc--c--cccc--------ccc------cccccccchhHHHhhhhCCCCcccccCCCCCCCceeeh
Q psy9583 82 SKLS---------SKT--E--IKNK--------KDI------KNLNTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKE 134 (866)
Q Consensus 82 ~~~~---------~~~--~--~~~~--------~~~------~~~~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~ 134 (866)
+... ... . ..+. .+. ...+..+||++||||+|+||||+.| +|||++|||+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~vRklAre~gVDL~~V-~GTGp~GRItk~ 161 (229)
T 1zy8_K 83 EDWKHVEIPKDVGPPPPVSKPSEPRPSPEPQISIPVKKEHIPGTLRFRLSPAARNILEKHSLDASQG-TATGPRGIFTKE 161 (229)
T ss_dssp -----------------------------------------------CBCHHHHHHHHHTTCCSSSS-CCCSTTSCBCHH
T ss_pred ccccccccccccccccccccCCCcccccccccCCCcccccccccccccCChHHHHHHHHcCCCcccc-CCCCCCCceehH
Confidence 2100 000 0 0000 000 0123468999999999999999999 899999999999
Q ss_pred hHHhhhhh
Q psy9583 135 DVLKVLSS 142 (866)
Q Consensus 135 Dv~~~~~~ 142 (866)
||++|++.
T Consensus 162 DV~~~~~~ 169 (229)
T 1zy8_K 162 DALKLVQL 169 (229)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999864
No 100
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.94 E-value=1.9e-26 Score=265.62 Aligned_cols=257 Identities=21% Similarity=0.246 Sum_probs=186.0
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
.++||+|||||+||++||.+|++. ++|+|||++ +.+||.+.+... ..++++.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~------~~~GG~~~~~~~--------------------~~~g~~~- 158 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEER------GWLGGDMWLKGI--------------------KQEGFNK- 158 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTT------SSSSCSGGGTCS--------------------EETTTTE-
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCC------CCCCCeeecccc--------------------ccCCCCC-
Confidence 458999999999999999999999 999999998 677887643110 0011110
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCc--eEEEecEEEEecCCCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTK--ETITAKYIIIATGSKA 544 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g--~~i~~d~lViATGs~p 544 (866)
+..++..+ +...+ +.+++++.+..+. ++. ....+.+.. +++ ..+.||+||+|||+.|
T Consensus 159 ----~~~~~~~~-----------l~~~l-~~~v~~~~~~~v~~i~~---~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 159 ----DSRKVVEE-----------LVGKL-NENTKIYLETSALGVFD---KGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp ----EHHHHHHH-----------HHHTC-CTTEEEETTEEECCCEE---CSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred ----CHHHHHHH-----------HHHHH-hcCCEEEcCCEEEEEEc---CCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 11111111 11112 5688888777665 222 223333322 233 3799999999999998
Q ss_pred cCCCCCcCCCceEecchhhhccc-----cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHH
Q psy9583 545 RSFPGVKFDENLILSNKGALEMI-----NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFH 619 (866)
Q Consensus 545 ~~~p~~~~~~~~~~t~~~~~~~~-----~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~ 619 (866)
+.++..+.+...+++..++..+. ..+++++|+|+|++|+| +
T Consensus 220 ~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle----------------------------------~ 265 (493)
T 1y56_A 220 STMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI----------------------------------Q 265 (493)
T ss_dssp CCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH----------------------------------H
T ss_pred cCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH----------------------------------H
Confidence 87665554555577666554332 23589999999999998 4
Q ss_pred HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCee--ecCCCcEE-
Q psy9583 620 LLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLK--VNENNFII- 696 (866)
Q Consensus 620 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~--~~~~G~i~- 696 (866)
.+++.||++++++.|+++..++....+.+ .+|. ++++|.|++|+|++|+.++ ++.+|++ ++++|+|.
T Consensus 266 ~l~~~GV~v~~~~~v~~i~~~~~v~~v~~--~~g~------~i~aD~Vv~a~G~~p~~~l--~~~~g~~~~~~~~g~i~~ 335 (493)
T 1y56_A 266 ELERWGIDYVHIPNVKRVEGNEKVERVID--MNNH------EYKVDALIFADGRRPDINP--ITQAGGKLRFRRGYYSPV 335 (493)
T ss_dssp HHHHHTCEEEECSSEEEEECSSSCCEEEE--TTCC------EEECSEEEECCCEEECCHH--HHHTTCCEEEETTEEEEC
T ss_pred HHHhCCcEEEeCCeeEEEecCCceEEEEe--CCCe------EEEeCEEEECCCcCcCchH--HHhcCCCccccCCceeec
Confidence 56788999999999999986654333333 3565 8999999999999999987 4666654 45788887
Q ss_pred eCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhCC
Q psy9583 697 VNDNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 697 Vd~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g~ 738 (866)
||++++ +.|+|||+|||++. .++..|+.||++||.+|++.
T Consensus 336 vd~~~~-s~~~vya~GD~~~~-~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 336 LDEYHR-IKDGIYVAGSAVSI-KPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp CCTTSE-EETTEEECSTTTCC-CCHHHHHHHHHHHHHHHHHH
T ss_pred cccccC-cCCCEEEEeccCCc-cCHHHHHHHHHHHHHHHHHH
Confidence 899999 99999999999964 57899999999999999864
No 101
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=7e-26 Score=270.93 Aligned_cols=259 Identities=20% Similarity=0.271 Sum_probs=192.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
..+||+|||||+||++||..|++.|++|+|||++ +.+||.+.+.+++|.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~------~~~gg~~~~~~~~~~~~----------------------- 422 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAH------SEIGGQFNIAKQIPGKE----------------------- 422 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS------SSSCTTHHHHTTSTTCT-----------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCC------CCCCCeeeccccCCCHH-----------------------
Confidence 3589999999999999999999999999999997 67888775444433211
Q ss_pred ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEE-EecEEEEecCCCCcCC
Q psy9583 469 NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETI-TAKYIIIATGSKARSF 547 (866)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i-~~d~lViATGs~p~~~ 547 (866)
++..+.. .+...+++.+++++.++.+.. ..+ .||+||||||+.|+.|
T Consensus 423 ----~~~~~~~-----------~~~~~~~~~gv~~~~~~~v~~-----------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 423 ----EFYETLR-----------YYRRMIEVTGVTLKLNHTVTA-----------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ----THHHHHH-----------HHHHHHHHHTCEEEESCCCCS-----------------SSSCCSSEEEECCCEEECCC
T ss_pred ----HHHHHHH-----------HHHHHHHHcCCEEEeCcEecH-----------------HHhhcCCEEEEccCCCcCCC
Confidence 1111111 123445667899887764321 113 7999999999999877
Q ss_pred CCCcCCCceEecchhhhccc-cCCCeEEEECCcHHHHHHHHHHHhcCC--------------------------------
Q psy9583 548 PGVKFDENLILSNKGALEMI-NVPKKLCIIGAGVIGLEIGSIWRRLGS-------------------------------- 594 (866)
Q Consensus 548 p~~~~~~~~~~t~~~~~~~~-~~~~~vvVIGgG~~glE~A~~l~~~g~-------------------------------- 594 (866)
+..+.+...+++..+..... ..+++|+|||||++|+|+|..|++.|.
T Consensus 471 ~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 550 (671)
T 1ps9_A 471 PIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQI 550 (671)
T ss_dssp CCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCC
T ss_pred CCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccccccccccccc
Confidence 66555555677776665443 357999999999999999999998874
Q ss_pred -----cEEEEecCCcCC-CcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEE
Q psy9583 595 -----EVTILEMSSNFL-NTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLL 668 (866)
Q Consensus 595 -----~Vtli~~~~~~l-~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi 668 (866)
+|+++++.+..+ ..+++.....+.+.|++.||++++++.++++.. +++.+. . +|. ..++++|.||
T Consensus 551 ~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~v~~~-~--~G~----~~~i~~D~Vi 621 (671)
T 1ps9_A 551 PRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DGLHVV-I--NGE----TQVLAVDNVV 621 (671)
T ss_dssp CCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET--TEEEEE-E--TTE----EEEECCSEEE
T ss_pred CCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC--CeEEEe-c--CCe----EEEEeCCEEE
Confidence 456677766555 356777778888999999999999999999973 344443 2 442 3479999999
Q ss_pred EeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHH
Q psy9583 669 IAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRGP-MLAHKAEEEGIMVAEHI 735 (866)
Q Consensus 669 ~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~~-~~~~~A~~~g~~aa~~i 735 (866)
+|+|++||++++ +.+ +.. .++||++|||+... ..+..|++||..+|.||
T Consensus 622 ~a~G~~p~~~l~--~~l----~~~------------g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 622 ICAGQEPNRALA--QPL----IDS------------GKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp ECCCEEECCTTH--HHH----HTT------------TCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred ECCCccccHHHH--HHH----Hhc------------CCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 999999999873 321 112 26899999998643 46999999999999986
No 102
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.93 E-value=3.4e-25 Score=256.96 Aligned_cols=307 Identities=18% Similarity=0.219 Sum_probs=200.0
Q ss_pred ccceeeecCCccHHHHHHHHH-HCCCeEEEEeccCCCcccccCCCcccee---cc---ccchhHHHhhHHHHHHhhhhhh
Q psy9583 390 NFDVIVIGAGPGGYVASIRLA-QLGFKTACIDEWKDNEENFALGGTCTNV---GC---IPSKALLQTSHSFENVKNSFFE 462 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~-~~g~~V~liek~~~~~~~~~~GG~~~~~---g~---~P~~~~~~~~~~~~~~~~~~~~ 462 (866)
++||+|||||+||+++|..|+ +.|++|+|||+. +.+||+|... || +|++.+...... .. ...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~------~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~--~~---~~~ 76 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKA------DGPGGTWYWNRYPGALSDTESHLYRFSFDR--DL---LQE 76 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESS------SSSCTHHHHCCCTTCEEEEEGGGSSCCSCH--HH---HHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECC------CCCCCcccccCCCCceecCCcceeeecccc--cc---ccC
Confidence 489999999999999999999 899999999998 6899998543 43 344333222100 00 011
Q ss_pred cCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCc--EEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEec
Q psy9583 463 YGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKI--KFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIAT 540 (866)
Q Consensus 463 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV--~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViAT 540 (866)
+.+. ....+...+.. .+....++.++ ++..++.+..-..+.....+.|.+.+|+++.||+||+||
T Consensus 77 ~~~~--~~~~~~~ei~~-----------~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~At 143 (540)
T 3gwf_A 77 STWK--TTYITQPEILE-----------YLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAV 143 (540)
T ss_dssp CCCS--BSEEEHHHHHH-----------HHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECC
T ss_pred CCCc--ccCCCHHHHHH-----------HHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECC
Confidence 1111 11122222222 24445666777 677766555211222334677777778889999999999
Q ss_pred C--CCCcCCCCCc---CCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC-CCccc----
Q psy9583 541 G--SKARSFPGVK---FDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF-LNTVD---- 610 (866)
Q Consensus 541 G--s~p~~~p~~~---~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~-l~~~d---- 610 (866)
| +.|..|+.++ +.+..+++..........+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+ ++.++
T Consensus 144 G~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~ 223 (540)
T 3gwf_A 144 GLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVN 223 (540)
T ss_dssp CSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCC
T ss_pred cccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCC
Confidence 9 5777654443 234445555555555567899999999999999999999999999999999984 33322
Q ss_pred HHHHHHHH------------------------------------------------------------------------
Q psy9583 611 EEIAKKAF------------------------------------------------------------------------ 618 (866)
Q Consensus 611 ~~~~~~l~------------------------------------------------------------------------ 618 (866)
+...+.++
T Consensus 224 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (540)
T 3gwf_A 224 PEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFI 303 (540)
T ss_dssp HHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHH
Confidence 22222211
Q ss_pred -HH---------------------------------HHHcCCEEEe--CceEEEEEEcCCeEEEEEeeCCCCccceeEEE
Q psy9583 619 -HL---------------------------------LNKQGLNIIL--NTKIHDIKINKENVLINYSNKSTNVKTEIITS 662 (866)
Q Consensus 619 -~~---------------------------------l~~~GV~i~~--~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~ 662 (866)
+. |.+.+|+++. ...|+++..++ +.+ .+|. .+
T Consensus 304 ~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g----v~~--~dG~------~~ 371 (540)
T 3gwf_A 304 RAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG----VVT--EDGV------LH 371 (540)
T ss_dssp HHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE----EEE--TTCC------EE
T ss_pred HHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe----EEc--CCCC------EE
Confidence 00 1134778875 67888886543 333 3776 89
Q ss_pred eccEEEEeeccccCCCCCCccccCeeecCCCcEEeCC--------C--CC-CCCCCEEEe-cccCCCCCcHHHHHHHHHH
Q psy9583 663 IFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND--------N--CE-TNIPNIYAI-GDVVRGPMLAHKAEEEGIM 730 (866)
Q Consensus 663 ~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~--------~--l~-Ts~~~VyA~-GD~a~~~~~~~~A~~~g~~ 730 (866)
++|.||+|||++++..++ .. +.+..++++.+++ + +. .+.||+|++ |..+........+-.|+++
T Consensus 372 ~~DvIV~ATGf~~~~~~~--~~--~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~ 447 (540)
T 3gwf_A 372 ELDVLVFATGFDAVDGNY--RR--IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEW 447 (540)
T ss_dssp ECSEEEECCCBSCSSHHH--HT--SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHH
T ss_pred ECCEEEECCccCccccCc--Cc--ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHH
Confidence 999999999999987442 22 2222222244432 2 22 378999999 8876544567778889999
Q ss_pred HHHHHh
Q psy9583 731 VAEHIS 736 (866)
Q Consensus 731 aa~~i~ 736 (866)
+++.|.
T Consensus 448 i~~~i~ 453 (540)
T 3gwf_A 448 ISDTIG 453 (540)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888774
No 103
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.91 E-value=6e-24 Score=246.76 Aligned_cols=198 Identities=20% Similarity=0.219 Sum_probs=127.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||+||+++|.+|++.|++|+|||++ +.+||+|. .++.|..........+..........+.....
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~------~~~GGtw~-~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~ 81 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAG------EDVGGTWY-WNRYPGCRLDTESYAYGYFALKGIIPEWEWSE 81 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCTHHH-HCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSB
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCC------CCCCCccc-cCCCCceeecCchhhcccccCcccccCCCccc
Confidence 589999999999999999999999999999998 78999984 45666433222222221110000000011111
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCc--EEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecC--CCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKI--KFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATG--SKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV--~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATG--s~p~ 545 (866)
...+...+..+ +....++.++ ++.+++.+..-..+.....+.|.+.+|+++.||+||+||| +.|.
T Consensus 82 ~~~~~~ei~~y-----------l~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 82 NFASQPEMLRY-----------VNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp SSCBHHHHHHH-----------HHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred cCCCHHHHHHH-----------HHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 12223333222 2334445555 4555544442112223356777777888999999999999 7777
Q ss_pred CCCCCc---CCCceEecchhhhc-------cccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 546 SFPGVK---FDENLILSNKGALE-------MINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 546 ~~p~~~---~~~~~~~t~~~~~~-------~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
.|+.++ +.+..+++...... ....+++|+|||+|.+|+|+|..|++.+.+|+++.|.+.+
T Consensus 151 ~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 151 MPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp -CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 654443 23344555554444 4446899999999999999999999999999999999985
No 104
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.90 E-value=6.1e-23 Score=238.49 Aligned_cols=193 Identities=15% Similarity=0.242 Sum_probs=129.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcccee---cc---ccchhHHHhhHHHHHHhhhhhh
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNV---GC---IPSKALLQTSHSFENVKNSFFE 462 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~---g~---~P~~~~~~~~~~~~~~~~~~~~ 462 (866)
.++||+|||||+||+++|.+|++.|++|+|||+. +.+||+|... || +|++.+...... .. ...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~------~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~--~~---~~~ 88 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAA------SGVGGVWYWNRYPGARCDVESIDYSYSFSP--EL---EQE 88 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCTHHHHCCCTTCBCSSCTTTSSCCSCH--HH---HHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCC------CCCCCccccCCCCCceeCCCchhccccccc--cc---ccC
Confidence 3589999999999999999999999999999998 7899998632 44 454433322110 00 001
Q ss_pred cCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCc--EEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEec
Q psy9583 463 YGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKI--KFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIAT 540 (866)
Q Consensus 463 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV--~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViAT 540 (866)
+.+. ....+...+.. .+...+++.++ ++..++.+..-..+.....+.|.+.+|+++.||+||+||
T Consensus 89 ~~~~--~~~~~~~ei~~-----------yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~At 155 (549)
T 4ap3_A 89 WNWS--EKYATQPEILA-----------YLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAA 155 (549)
T ss_dssp CCCS--SSSCBHHHHHH-----------HHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECC
T ss_pred CCCc--cCCCCHHHHHH-----------HHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECc
Confidence 1111 11122222222 23445666776 666665554211222334677777778889999999999
Q ss_pred C--CCCcCCCCCcC---CCceEecchhh-hccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 541 G--SKARSFPGVKF---DENLILSNKGA-LEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 541 G--s~p~~~p~~~~---~~~~~~t~~~~-~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
| +.|..|+.++. .+..+++.... ......+++|+|||+|.+|+|+|..|++.+.+|+++.|.+.+
T Consensus 156 G~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 156 GPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 9 77776654432 23344554433 233346899999999999999999999999999999999985
No 105
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.89 E-value=8.5e-23 Score=238.20 Aligned_cols=311 Identities=19% Similarity=0.260 Sum_probs=187.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHH--hhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENV--KNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~--~~~~~~~gi~~ 467 (866)
++||+|||||++|+++|..|++.|++|+|||+. +.+||+|. .+|.|..........+... ......+.+.
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~------~~~GG~w~-~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~- 87 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETA------GDVGGVWY-WNRYPGARCDIESIEYCYSFSEEVLQEWNWT- 87 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCTHHH-HCCCTTCBCSSCTTTSSCCSCHHHHHHCCCC-
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCC------CCCCCccc-ccCCCceeecccccccccccChhhhhccCcc-
Confidence 589999999999999999999999999999998 67899984 3355532211110000000 0000011111
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCC--cEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCC--C
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNK--IKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGS--K 543 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--V~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs--~ 543 (866)
....+...+..+ +....++.+ +++.+++.+..-..+.....+.|.+++|.++.||+||+|||. .
T Consensus 88 -~~~~~~~~i~~y-----------l~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 88 -ERYASQPEILRY-----------INFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp -BSSCBHHHHHHH-----------HHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCC
T ss_pred -cccCCHHHHHHH-----------HHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCC
Confidence 111122222222 233344444 456655554421111222456676667778999999999994 5
Q ss_pred CcCCCCCc---CCCceEecchhhhc-cccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-Cc----ccHHHH
Q psy9583 544 ARSFPGVK---FDENLILSNKGALE-MINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-NT----VDEEIA 614 (866)
Q Consensus 544 p~~~p~~~---~~~~~~~t~~~~~~-~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-~~----~d~~~~ 614 (866)
|..|+.++ +.+..+++.....+ ....+++|+|||+|.+|+|++..+++.+.+|+++.|.+.+. +. +.++..
T Consensus 156 p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~ 235 (542)
T 1w4x_A 156 PQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFL 235 (542)
T ss_dssp CCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHH
T ss_pred CCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHH
Confidence 66554333 23333555443312 33458999999999999999999999999999999988762 21 111111
Q ss_pred H-----------------------------------------------------------------------HHHHHHH-
Q psy9583 615 K-----------------------------------------------------------------------KAFHLLN- 622 (866)
Q Consensus 615 ~-----------------------------------------------------------------------~l~~~l~- 622 (866)
. .+.+.++
T Consensus 236 ~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (542)
T 1w4x_A 236 ADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRN 315 (542)
T ss_dssp HHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 1 0111111
Q ss_pred ----------------------------------HcCCEEE--eCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 623 ----------------------------------KQGLNII--LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 623 ----------------------------------~~GV~i~--~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
+.+|+++ .+..|+++..+ + +.+. + . ++++|.
T Consensus 316 ~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~--g--v~~~--d-~------~~~~D~ 382 (542)
T 1w4x_A 316 TVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPR--G--VRTS--E-R------EYELDS 382 (542)
T ss_dssp HCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSS--E--EEES--S-C------EEECSE
T ss_pred HcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCC--e--EEeC--C-e------EEecCE
Confidence 1234554 25566666532 2 3333 3 4 899999
Q ss_pred EEEeeccccCCCCCCccccCeeecCCCcEEeCC--------C--CC-CCCCCEEEe-cccCC--CCCcHHHHHHHHHHHH
Q psy9583 667 LLIAIGRIPNTNNLNIDKIGLKVNENNFIIVND--------N--CE-TNIPNIYAI-GDVVR--GPMLAHKAEEEGIMVA 732 (866)
Q Consensus 667 vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~--------~--l~-Ts~~~VyA~-GD~a~--~~~~~~~A~~~g~~aa 732 (866)
||+|||+++++.+ +...++. ..+| +.+++ + +. ...||+|++ |+.+. .+.....|..|+++++
T Consensus 383 ii~atG~~~~~~~--~~~~~i~-g~~G-~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia 458 (542)
T 1w4x_A 383 LVLATGFDALTGA--LFKIDIR-GVGN-VALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVT 458 (542)
T ss_dssp EEECCCCCCTTHH--HHTSEEE-CGGG-CBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHH
T ss_pred EEEcCCccccccC--cCceeeE-CCCC-CCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHH
Confidence 9999999998765 3333332 2234 44443 2 22 368999998 99863 3456689999999999
Q ss_pred HHHhC
Q psy9583 733 EHISG 737 (866)
Q Consensus 733 ~~i~g 737 (866)
++|..
T Consensus 459 ~~i~~ 463 (542)
T 1w4x_A 459 DHIAY 463 (542)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99863
No 106
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.85 E-value=9.1e-21 Score=187.89 Aligned_cols=152 Identities=18% Similarity=0.269 Sum_probs=132.9
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------cc-----cHHHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------TV-----DEEIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------~~-----d~~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
+++|||||++|+++|..|++.|.+|+++++.+.++. .+ ++++.+.+.+.+++.|++++++ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 689999999999999999999999999999886662 23 5788999999999999999999 99999
Q ss_pred EEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCCC
Q psy9583 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVRG 717 (866)
Q Consensus 638 ~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~~ 717 (866)
+.+++.+.+.+. +| ++++|.||+|+|..|+. ++.+|++++ +|+|.||+++||+.|+|||+|||++.
T Consensus 82 ~~~~~~~~v~~~--~g-------~i~ad~vI~A~G~~~~~----~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~ 147 (180)
T 2ywl_A 82 RDMGGVFEVETE--EG-------VEKAERLLLCTHKDPTL----PSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGK 147 (180)
T ss_dssp EECSSSEEEECS--SC-------EEEEEEEEECCTTCCHH----HHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTC
T ss_pred EEcCCEEEEEEC--CC-------EEEECEEEECCCCCCCc----cccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCc
Confidence 887666655443 33 68999999999999853 356788888 89999999999999999999999987
Q ss_pred CC-cHHHHHHHHHHHHHHHhCC
Q psy9583 718 PM-LAHKAEEEGIMVAEHISGQ 738 (866)
Q Consensus 718 ~~-~~~~A~~~g~~aa~~i~g~ 738 (866)
+. +++.|..||++||.||.+.
T Consensus 148 ~~~~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 148 VPGHAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHhHHHHHHHHHHH
Confidence 76 9999999999999999863
No 107
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.77 E-value=2.9e-20 Score=212.57 Aligned_cols=314 Identities=18% Similarity=0.197 Sum_probs=174.6
Q ss_pred ceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccc--cCCCc--cceeccccchhHHHhh----------------H
Q psy9583 392 DVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENF--ALGGT--CTNVGCIPSKALLQTS----------------H 451 (866)
Q Consensus 392 dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~--~~GG~--~~~~g~~P~~~~~~~~----------------~ 451 (866)
||+|||||+||++||..|++.|.+|+||||. ...... .-||. |.+.++.|.+.+.... .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999996 111111 12332 2222334433222110 0
Q ss_pred HHHHHhhhhhhcCcccccc-----ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcC
Q psy9583 452 SFENVKNSFFEYGINTQNV-----TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINK 526 (866)
Q Consensus 452 ~~~~~~~~~~~~gi~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~ 526 (866)
.......++..+|+++... ...+...+...+.....+...+...+++.|++++.++.+.+...+.....+.+.+.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v~l~~~~~~v~Gv~v~~~ 159 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLVEIRVKDGKVTGFVTEKR 159 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEEEEEEETTEEEEEEETTT
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEeCCEEEEEEEEeC
Confidence 0111122344455543220 00000000000000112223344445678999998874432211111112244333
Q ss_pred CceEEEecEEEEecCCCCcCCCCCcCCCceEecchhh----------hcccc--CCCeEEEECCcHHHHHHHHHHHhcCC
Q psy9583 527 TKETITAKYIIIATGSKARSFPGVKFDENLILSNKGA----------LEMIN--VPKKLCIIGAGVIGLEIGSIWRRLGS 594 (866)
Q Consensus 527 ~g~~i~~d~lViATGs~p~~~p~~~~~~~~~~t~~~~----------~~~~~--~~~~vvVIGgG~~glE~A~~l~~~g~ 594 (866)
+ ..+.+|.||+|||+.+..++.... ....+.+.. .++.. .....+++|+| +++++..+...|.
T Consensus 160 ~-g~~~a~~VVlAtGg~~~~~~~~~~--~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~ 234 (472)
T 2e5v_A 160 G-LVEDVDKLVLATGGYSYLYEYSST--QSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGA 234 (472)
T ss_dssp E-EECCCSEEEECCCCCGGGSSSBSS--CTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTC
T ss_pred C-CeEEeeeEEECCCCCcccCccccC--CCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCce
Confidence 3 357899999999998875543211 111122221 11111 11234456766 8888888988898
Q ss_pred cEEEEecCCcCCCcccHHH--------HHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe-cc
Q psy9583 595 EVTILEMSSNFLNTVDEEI--------AKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI-FD 665 (866)
Q Consensus 595 ~Vtli~~~~~~l~~~d~~~--------~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~-~D 665 (866)
.+ +..+++++++.++++. ...+.+.+++.|. ++++... + +. +. ..++ .|
T Consensus 235 ~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~---~~-----~~----------~~~~~~~ 292 (472)
T 2e5v_A 235 QI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I---ED-----FE----------RKFPVVA 292 (472)
T ss_dssp EE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C---TT-----HH----------HHCHHHH
T ss_pred EE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h---HH-----HH----------HHhHHHH
Confidence 87 7888889987665543 5666777776653 3322110 0 00 00 1222 46
Q ss_pred EEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCC-CC----CcHHHHHHHHHHHHHHHh
Q psy9583 666 KLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVR-GP----MLAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 666 ~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~-~~----~~~~~A~~~g~~aa~~i~ 736 (866)
.++++.|.+|+ +.+..... .....|+|.||+++||++|||||+|||++ +. ++.++|..+|.+.++.+.
T Consensus 293 ~~~~~~G~dp~-~~i~v~p~--~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~ 365 (472)
T 2e5v_A 293 KYLARHGHNYK-VKIPIFPA--AHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLP 365 (472)
T ss_dssp HHHHHTTCCTT-SCEECEEE--EEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGG
T ss_pred HHHHHhCcCcc-cceEeehh--hceeCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHH
Confidence 77888999999 66433222 23336889999999999999999999987 33 677778777666655543
No 108
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.76 E-value=4.2e-17 Score=187.78 Aligned_cols=246 Identities=17% Similarity=0.182 Sum_probs=145.0
Q ss_pred HHHHHHhCCcEEEEeEEEE-eccccCc-----ccEEEEEc---CCc--eEEEecEEEEecCCCCcCCCCCcCCCceEecc
Q psy9583 492 ILFLFKKNKIKFFHGHAIF-TGKIQNN-----FHEIQIIN---KTK--ETITAKYIIIATGSKARSFPGVKFDENLILSN 560 (866)
Q Consensus 492 ~~~~~~~~gV~v~~g~~v~-~~~~~~~-----~~~v~v~~---~~g--~~i~~d~lViATGs~p~~~p~~~~~~~~~~t~ 560 (866)
++...++.+..+.+++.+. +...+.+ ...+.|.. ..+ .++.+++||+|||..|..|...+..+..+++.
T Consensus 151 l~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss 230 (501)
T 4b63_A 151 MRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSS 230 (501)
T ss_dssp HHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGG
T ss_pred HHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceeecc
Confidence 4445556666777877766 3221111 12344443 222 67899999999999988776665555444443
Q ss_pred hhhhcc------ccCCCeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCCCc---------ccHHHH---------
Q psy9583 561 KGALEM------INVPKKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFLNT---------VDEEIA--------- 614 (866)
Q Consensus 561 ~~~~~~------~~~~~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l~~---------~d~~~~--------- 614 (866)
+..... ...+|+|+|||+|.+|+|++..|++. +.+|+++.|.+.+.+. +.++..
T Consensus 231 ~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~ 310 (501)
T 4b63_A 231 KYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAA 310 (501)
T ss_dssp GHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHH
T ss_pred ccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHH
Confidence 332211 23579999999999999999999875 6899999998766431 111111
Q ss_pred ----------------------HHHHHHHHH----------cCCEEEeCceEEEEEEcC--CeEEEEEeeC----CCCcc
Q psy9583 615 ----------------------KKAFHLLNK----------QGLNIILNTKIHDIKINK--ENVLINYSNK----STNVK 656 (866)
Q Consensus 615 ----------------------~~l~~~l~~----------~GV~i~~~~~v~~i~~~~--~~~~v~~~~~----~g~~~ 656 (866)
..+.+.+.+ ....+..+..+..+.... +.+.+..... ++...
T Consensus 311 ~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~ 390 (501)
T 4b63_A 311 ERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAAN 390 (501)
T ss_dssp HHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC-------
T ss_pred HHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEe
Confidence 111111111 123466666776666533 2333332211 11111
Q ss_pred ceeEEEeccEEEEeeccccCCCCCCccc-cCeeecCCCcEEeCCCCCC--------CCCCEEEecccC-----CCCCcHH
Q psy9583 657 TEIITSIFDKLLIAIGRIPNTNNLNIDK-IGLKVNENNFIIVNDNCET--------NIPNIYAIGDVV-----RGPMLAH 722 (866)
Q Consensus 657 ~~~~~~~~D~vi~a~G~~p~~~~l~l~~-~gl~~~~~G~i~Vd~~l~T--------s~~~VyA~GD~a-----~~~~~~~ 722 (866)
.+..++++|.||+|||++|+.....+.. ..+..+.+|.+.|+..++. ..++||+.|-+- +.+.+..
T Consensus 391 ~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~ 470 (501)
T 4b63_A 391 DVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSV 470 (501)
T ss_dssp -CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTT
T ss_pred CCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHH
Confidence 2234899999999999999864210111 1355566777888876542 246799999543 2355667
Q ss_pred HHHHHHHHHHHHHhCC
Q psy9583 723 KAEEEGIMVAEHISGQ 738 (866)
Q Consensus 723 ~A~~~g~~aa~~i~g~ 738 (866)
.|++.|+++ +.|+|+
T Consensus 471 ~a~R~~~I~-~~l~g~ 485 (501)
T 4b63_A 471 LAVRGGEMV-QSIFGE 485 (501)
T ss_dssp HHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHH-HHHhcc
Confidence 888888765 455553
No 109
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.73 E-value=1.2e-17 Score=144.30 Aligned_cols=81 Identities=25% Similarity=0.486 Sum_probs=77.6
Q ss_pred Cc-cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEec
Q psy9583 1 MA-LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 1 m~-~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~ 79 (866)
|+ +++|+||++|+++.+|+|.+|+|++||.|++||+|++||++|+..+|+||.+|+|.++++++|+.|.+|++|+.++.
T Consensus 1 m~~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 1 MGQVVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIET 80 (93)
T ss_dssp CCCCEEEECCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEEC
T ss_pred CCcceEEEcCCCCCCCCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEec
Confidence 55 68999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CC
Q psy9583 80 DI 81 (866)
Q Consensus 80 ~~ 81 (866)
.+
T Consensus 81 ~~ 82 (93)
T 1k8m_A 81 EA 82 (93)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 110
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.72 E-value=2.4e-17 Score=141.07 Aligned_cols=79 Identities=27% Similarity=0.489 Sum_probs=75.8
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC-EEecCCEEEEEecCC
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS-IVTSNQVIALIDTDI 81 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~-~v~~g~~l~~~~~~~ 81 (866)
.++|+||++|+++.+|+|.+|+|++||.|++||+|++||+||+.++|+||.+|+|.++++++|+ .|++|++|+.++...
T Consensus 5 ~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~~~ 84 (87)
T 3crk_C 5 HMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE 84 (87)
T ss_dssp EEEEECCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEESSS
T ss_pred ceEEeCCCCCCCCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEEccc
Confidence 4789999999999999999999999999999999999999999999999999999999999999 899999999998644
No 111
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=145.00 Aligned_cols=81 Identities=37% Similarity=0.621 Sum_probs=77.0
Q ss_pred ccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEE-ecCCEEEEEecC
Q psy9583 2 ALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIV-TSNQVIALIDTD 80 (866)
Q Consensus 2 ~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v-~~g~~l~~~~~~ 80 (866)
|.++|+||++|++|.+|+|.+|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+.| .+|++|+.++..
T Consensus 6 ~~~~i~~P~lg~~~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~ 85 (98)
T 2dnc_A 6 SGIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEE 85 (98)
T ss_dssp CCEEEECCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEECT
T ss_pred ccEEEECCCCCCCCccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEecC
Confidence 3478999999999999999999999999999999999999999999999999999999999999998 999999999875
Q ss_pred Cc
Q psy9583 81 IS 82 (866)
Q Consensus 81 ~~ 82 (866)
.+
T Consensus 86 ~~ 87 (98)
T 2dnc_A 86 GE 87 (98)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 112
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.72 E-value=2.3e-17 Score=149.67 Aligned_cols=80 Identities=28% Similarity=0.503 Sum_probs=76.4
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC-EEecCCEEEEEecCC
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS-IVTSNQVIALIDTDI 81 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~-~v~~g~~l~~~~~~~ 81 (866)
.++|+||++|++|++|+|++|+|++||.|++||+|++||+||+.++|+||.+|+|.++++++|+ .|.+|++|+.++...
T Consensus 27 ~~~i~~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~~ 106 (128)
T 1y8o_B 27 HMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE 106 (128)
T ss_dssp EEEEECCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEESSG
T ss_pred ceeEEcCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEecCc
Confidence 4789999999999999999999999999999999999999999999999999999999999998 899999999998654
Q ss_pred c
Q psy9583 82 S 82 (866)
Q Consensus 82 ~ 82 (866)
+
T Consensus 107 ~ 107 (128)
T 1y8o_B 107 A 107 (128)
T ss_dssp G
T ss_pred c
Confidence 3
No 113
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=147.42 Aligned_cols=79 Identities=24% Similarity=0.461 Sum_probs=76.0
Q ss_pred cEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC-EEecCCEEEEEecCC
Q psy9583 3 LIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS-IVTSNQVIALIDTDI 81 (866)
Q Consensus 3 ~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~-~v~~g~~l~~~~~~~ 81 (866)
.++|+||++|++|.+|+|++|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+ .|.+|++|+.++...
T Consensus 7 ~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~~~ 86 (108)
T 2dne_A 7 GQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGKP 86 (108)
T ss_dssp CEEEECCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEESCH
T ss_pred ceEEecCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEecCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999 899999999998654
No 114
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.68 E-value=1.8e-17 Score=185.23 Aligned_cols=211 Identities=20% Similarity=0.266 Sum_probs=116.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccc--cCCCcc--ceeccccchhHHHhhHH---------HHH
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENF--ALGGTC--TNVGCIPSKALLQTSHS---------FEN 455 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~--~~GG~~--~~~g~~P~~~~~~~~~~---------~~~ 455 (866)
+++||+|||||++|++||..|++.|.+|+|||+.+.+.... .-||.| .+.+|.|.+.+....+. ...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 36999999999999999999999999999999973221111 014666 45555554322111110 111
Q ss_pred HhhhhhhcCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-ecccc-CcccEEEEEcCCceEEEe
Q psy9583 456 VKNSFFEYGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQ-NNFHEIQIINKTKETITA 533 (866)
Q Consensus 456 ~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~-~~~~~v~v~~~~g~~i~~ 533 (866)
...++..+|++.... ++..++... ....+...+...+++.|++++.++.+. +...+ .....+.+.++++ ++.+
T Consensus 83 ~~~~~~~~Gi~~~~~--~~g~~~p~~--~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~a 157 (401)
T 2gqf_A 83 FISLVAEQGITYHEK--ELGQLFCDE--GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQC 157 (401)
T ss_dssp HHHHHHHTTCCEEEC--STTEEEETT--CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEE
T ss_pred HHHHHHhCCCceEEC--cCCEEccCC--CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEEC
Confidence 122233445442210 000000000 011122234556677899999987764 32110 0023466666555 7999
Q ss_pred cEEEEecCCCCcCCC--------------------CCcCCCceEecchh-h-hcc--ccCCCeEEEEC------------
Q psy9583 534 KYIIIATGSKARSFP--------------------GVKFDENLILSNKG-A-LEM--INVPKKLCIIG------------ 577 (866)
Q Consensus 534 d~lViATGs~p~~~p--------------------~~~~~~~~~~t~~~-~-~~~--~~~~~~vvVIG------------ 577 (866)
|+||+|||+.+.... .+.. ....++..+ + ..+ ...+.++.|+|
T Consensus 158 d~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l-~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~~l~t~ 236 (401)
T 2gqf_A 158 KNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASL-VPFTYRETDKFLTALSGISLPVTITALCGKSFYNQLLFTH 236 (401)
T ss_dssp SEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEES-CCEECCGGGGGGGGGTTCEEEEEEEETTSCEEEEEEEECS
T ss_pred CEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCccee-eceecCCchhhcccCCCeeeeeEEEEcCCceEEeCEEEEC
Confidence 999999998874211 1111 111122322 2 112 22345666668
Q ss_pred ---CcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccH
Q psy9583 578 ---AGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDE 611 (866)
Q Consensus 578 ---gG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~ 611 (866)
+|+++++++..+.+ |.++++ .++|.++.
T Consensus 237 ~g~sG~~~l~~s~~~~~-~~~~~i-----~~~p~~~~ 267 (401)
T 2gqf_A 237 RGISGPAVLQISNYWQP-TESVEI-----DLLPNHNV 267 (401)
T ss_dssp SEEESHHHHHHTTTCCT-TCCEEE-----ESCSSSCH
T ss_pred CCccHHHHHHHHHHHhc-CCEEEE-----ECCCCCCH
Confidence 89999999988866 777776 36666653
No 115
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.66 E-value=2.2e-16 Score=132.78 Aligned_cols=76 Identities=42% Similarity=0.759 Sum_probs=74.0
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEec
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~ 79 (866)
++++||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.|.+|++|+.++.
T Consensus 2 ~~i~~P~~g~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 2 IDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred cEEECCCCCCCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999975
No 116
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.62 E-value=7.3e-16 Score=128.89 Aligned_cols=75 Identities=33% Similarity=0.729 Sum_probs=73.4
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
++++||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++++++|+.|..|++|+.++
T Consensus 2 ~~i~~P~~g~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 2 YEFKLPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp EEEECCCCSSSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred eEEECCCCCCCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999986
No 117
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.62 E-value=2.8e-17 Score=138.46 Aligned_cols=78 Identities=44% Similarity=0.833 Sum_probs=74.8
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEec
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~ 79 (866)
|+ ++++||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.|.+|++|+.++.
T Consensus 1 m~-~~i~~P~~g~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 1 SS-VDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CC-CCEECCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred CC-cEEEcCCCCCCCccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 44 5799999999999999999999999999999999999999999999999999999999999999999999998864
No 118
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.61 E-value=1.4e-15 Score=128.24 Aligned_cols=78 Identities=27% Similarity=0.504 Sum_probs=74.1
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ ++|+||++|++ +|+|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++++++|+.|.+|++|+.++..
T Consensus 1 m~-~~i~~p~~g~~--~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 77 (80)
T 1qjo_A 1 MV-KEVNVPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp CE-EEECCCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEESC
T ss_pred CC-eEEECCCCCCC--CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEcc
Confidence 44 68999999998 9999999999999999999999999999999999999999999999999999999999999864
Q ss_pred C
Q psy9583 81 I 81 (866)
Q Consensus 81 ~ 81 (866)
.
T Consensus 78 ~ 78 (80)
T 1qjo_A 78 G 78 (80)
T ss_dssp C
T ss_pred C
Confidence 3
No 119
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.6e-17 Score=181.05 Aligned_cols=243 Identities=14% Similarity=0.078 Sum_probs=143.4
Q ss_pred ccceeeecCCccHHHHHHHHHH--CCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ--LGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~--~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
.+||+||||||||++||++|++ .|++|+|||+. +.+||.|.+.+|.+++..+...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~------~~~GG~~~~~~~~~~~~~l~~~----------------- 121 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS------VAPGGGSWLGGQLFSAMVMRKP----------------- 121 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS------SSCCTTTTCCSTTCCCEEEETT-----------------
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECC------CCCCceEEeCCccCCHHHHHHH-----------------
Confidence 5899999999999999999975 59999999998 6899999888887755432110
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARSF 547 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~~ 547 (866)
...++++.|+++... +......+.++++++..+..+
T Consensus 122 ------------------------~~~~~~e~Gv~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 157 (326)
T 3fpz_A 122 ------------------------AHLFLQELEIPYEDE--------------------GDYVVVKHAALFISTVLSKVL 157 (326)
T ss_dssp ------------------------THHHHHHTTCCCEEC--------------------SSEEEESCHHHHHHHHHHHHH
T ss_pred ------------------------HHHHHHHcCCEEEEC--------------------CcceecceeEEEEcchhhhcc
Confidence 111234455554321 112223334444555444422
Q ss_pred CCCc---CCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHc
Q psy9583 548 PGVK---FDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQ 624 (866)
Q Consensus 548 p~~~---~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~ 624 (866)
+..+ .....+.............++++++|+|.++++.|..+...+.++++..+.........
T Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~-------------- 223 (326)
T 3fpz_A 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRD-------------- 223 (326)
T ss_dssp TSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBC--------------
T ss_pred ccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeeccccccccc--------------
Confidence 2211 11111111111112223578999999999999999999999999999887665432111
Q ss_pred CCEEEeCceEEEEEEcCCeEEEEEeeCCCC--ccceeEEEeccEEEEeeccccCCCCCCccccCeeecCCCcEEeCCCCC
Q psy9583 625 GLNIILNTKIHDIKINKENVLINYSNKSTN--VKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVNENNFIIVNDNCE 702 (866)
Q Consensus 625 GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~--~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~ 702 (866)
.... ...+...... ++. .......+.+|.+..+.|.+|. .+... .+.|.+|+.++
T Consensus 224 -~~~~-~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~~~~~-e~~iv~~~~~~ 280 (326)
T 3fpz_A 224 -LSQK-HGVILSTTGH-----------DGPFGAFCAKRIVDIDQNQKLGGMKGL---------DMNHA-EHDVVIHSGAY 280 (326)
T ss_dssp -TTSC-CCEEEECCCS-----------CSSSCSHHHHHHHHHCTTCCCCCCCCB---------CHHHH-HHHHHHHCEEC
T ss_pred -ceee-cceEEEEecc-----------eeeEeecceeEEEecCceeeecceecc---------ccccc-CCeEEECCCeE
Confidence 0000 0011111100 111 0001112344555555554442 22232 35688899999
Q ss_pred CCCCCEEEecccCC--------CCCcHHHHHHHHHHHHHHHhC
Q psy9583 703 TNIPNIYAIGDVVR--------GPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 703 Ts~~~VyA~GD~a~--------~~~~~~~A~~~g~~aa~~i~g 737 (866)
|++|||||+||+++ +| ....++.+|+.||+.|+.
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp-~~g~mi~SG~~AAe~I~~ 322 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGP-TFGAMALSGVHAAEQILK 322 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCS-CCHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEchHhccccCCCcCch-HHHHHHHHHHHHHHHHHH
Confidence 99999999999974 22 334567889999998863
No 120
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.56 E-value=1.4e-14 Score=121.61 Aligned_cols=75 Identities=17% Similarity=0.446 Sum_probs=71.4
Q ss_pred EEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 4 IEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 4 ~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
++++||++|++ + +|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++++++|+.|..|++|+.++...
T Consensus 2 ~~i~~P~~g~~--~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~~~ 76 (79)
T 1iyu_A 2 EIIRVPDIGGD--G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPAA 76 (79)
T ss_dssp EEEECCCCSSE--E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEECCC
T ss_pred cEEECCCCCCC--C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEecCC
Confidence 47999999997 7 999999999999999999999999999999999999999999999999999999999998543
No 121
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.53 E-value=3.9e-15 Score=125.79 Aligned_cols=78 Identities=22% Similarity=0.549 Sum_probs=74.0
Q ss_pred ccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 2 ALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 2 ~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
++++|+||++| ++.+|+|.+|++++||.|++||+|+++|++|+..+|+||.+|+|.++++++|+.|..|++|+.+...
T Consensus 1 ~~~~i~~p~~g-~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (81)
T 1gjx_A 1 ALVELKVPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAE 78 (81)
T ss_dssp CCEECCCCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECCS
T ss_pred CcEEEEcCCCC-CCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEec
Confidence 35789999999 6899999999999999999999999999999999999999999999999999999999999999754
No 122
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.47 E-value=1.7e-13 Score=141.17 Aligned_cols=157 Identities=20% Similarity=0.275 Sum_probs=112.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-----------------CCCcc-------cHHHHHHHHHHHHHc-C
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-----------------FLNTV-------DEEIAKKAFHLLNKQ-G 625 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-----------------~l~~~-------d~~~~~~l~~~l~~~-G 625 (866)
.+|+|||||+.|+++|..|++.|.+|+++++... +...+ ...+...+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999999999998721 11111 136677888888887 9
Q ss_pred CEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeeccccCCCCC---------------------Ccc
Q psy9583 626 LNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNNL---------------------NID 683 (866)
Q Consensus 626 V~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l---------------------~l~ 683 (866)
++++ +++|+++..+++.+. +.+ .+|. ++.+|.||+|+|..++...+ .+.
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~--~~g~------~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~ 154 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRT--WEGP------PARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLS 154 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEE--TTSC------CEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHH
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEE--CCCC------EEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHH
Confidence 9999 579999987766643 433 3564 78999999999995543210 012
Q ss_pred ccCeeecCCCc---------------EEeC-------CCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 684 KIGLKVNENNF---------------IIVN-------DNCETNIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 684 ~~gl~~~~~G~---------------i~Vd-------~~l~Ts~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
+.+++++...+ ..+. ...+|++|+|||+|||+ .......|+.||+.+|.+|..
T Consensus 155 ~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 155 RLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp HTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHH
T ss_pred hCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHh
Confidence 23333321110 0011 01237999999999999 778899999999999999964
No 123
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.46 E-value=1.5e-12 Score=150.63 Aligned_cols=173 Identities=18% Similarity=0.217 Sum_probs=96.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhh-------hh
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNS-------FF 461 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~-------~~ 461 (866)
.+|||+|||||+||++||..|++.|.+|+|||+.. ..+|. .+|.|+............+... ..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~-----~~iG~----~~Cnps~ggia~~~lv~ei~algg~~~~~~d 97 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI-----DTLGQ----MSCNPAIGGIGKGHLVKEVDALGGLMAKAID 97 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG-----GGTTC----CSSSSEEESTTHHHHHHHHHHTTCSHHHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc-----ccccc----ccccccccchhhHHHHHHHHHhccHHHHHhh
Confidence 35999999999999999999999999999999862 13332 3455543222111121111110 00
Q ss_pred hcCccccc------c-------ccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcCC
Q psy9583 462 EYGINTQN------V-------TLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINKT 527 (866)
Q Consensus 462 ~~gi~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~~ 527 (866)
..++.... . ..+-. .+...+...+++ .|++++.+.+..+.. .+...+.|.+.+
T Consensus 98 ~~gi~f~~l~~~kgpav~~~r~~~Dr~-----------~~~~~L~e~Le~~~GV~I~~~~V~~L~~--e~g~V~GV~t~d 164 (651)
T 3ces_A 98 QAGIQFRILNASKGPAVRATRAQADRV-----------LYRQAVRTALENQPNLMIFQQAVEDLIV--ENDRVVGAVTQM 164 (651)
T ss_dssp HHEEEEEEESTTSCGGGCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEE--SSSBEEEEEETT
T ss_pred hcccchhhhhcccCcccccchhhCCHH-----------HHHHHHHHHHHhCCCCEEEEEEEEEEEe--cCCEEEEEEECC
Confidence 00111000 0 01111 122234455666 699997665555422 112233455566
Q ss_pred ceEEEecEEEEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEe
Q psy9583 528 KETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILE 600 (866)
Q Consensus 528 g~~i~~d~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~ 600 (866)
|..+.+|.||+|||+.+..+..++... + .+.+ +| |.++++++..|.++|.+|+.+.
T Consensus 165 G~~I~Ad~VVLATGt~s~~~~i~G~~~---~----------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 165 GLKFRAKAVVLTVGTFLDGKIHIGLDN---Y----------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp SEEEEEEEEEECCSTTTCCEEECC------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred CCEEECCEEEEcCCCCccCccccCccc---C----------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 788999999999998876432222111 0 1233 46 7899999999999999998874
No 124
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.42 E-value=1.5e-14 Score=163.95 Aligned_cols=122 Identities=11% Similarity=-0.003 Sum_probs=83.0
Q ss_pred HHHHHHHHHhcCCcEEE-EecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeE
Q psy9583 582 GLEIGSIWRRLGSEVTI-LEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEII 660 (866)
Q Consensus 582 glE~A~~l~~~g~~Vtl-i~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~ 660 (866)
..+++..+...+..++. +..... .++..+...+.+.+++.| +++++++|++|+.+++++.+.+. +|.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~--~g~------ 244 (431)
T 3k7m_X 177 ALWMLQLVAAHHYSILGVVLSLDE---VFSNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVK--DGH------ 244 (431)
T ss_dssp HHHHHHHHHHTTSCHHHHHHTCCE---EETTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEET--TSC------
T ss_pred HHHHHHHHHhcCCccceeecchhh---hcCCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEEC--CCC------
Confidence 34455555555444332 211111 234444566666667778 99999999999988777776654 564
Q ss_pred EEeccEEEEeec--------cccCCCCCCccccCeeecCCCcEEeCCCCCCCCCCEEEecccCC
Q psy9583 661 TSIFDKLLIAIG--------RIPNTNNLNIDKIGLKVNENNFIIVNDNCETNIPNIYAIGDVVR 716 (866)
Q Consensus 661 ~~~~D~vi~a~G--------~~p~~~~l~l~~~gl~~~~~G~i~Vd~~l~Ts~~~VyA~GD~a~ 716 (866)
++.+|.||+|+| +.|+.+.+.++..+.... ...++|+.+++|+.+++|+.||+..
T Consensus 245 ~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~-~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 245 AFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHG-GQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCC-CCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred EEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCC-cceEEEEEEECCCCcCceEcCCCCE
Confidence 689999999999 888887643333333222 3349999999999999999999864
No 125
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.38 E-value=4.3e-14 Score=120.27 Aligned_cols=74 Identities=27% Similarity=0.515 Sum_probs=70.0
Q ss_pred CccEEEecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 1 MALIEVKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 1 m~~~~~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|+ ++|++|++ |+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.+...
T Consensus 1 m~-~~i~~p~~------G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 1 MV-KEVNVPDI------VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp CC-SCCCCCSC------CCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECC
T ss_pred CC-cEEECCCe------EEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcC
Confidence 55 57999988 899999999999999999999999999999999999999999999999999999999999865
Q ss_pred C
Q psy9583 81 I 81 (866)
Q Consensus 81 ~ 81 (866)
+
T Consensus 74 ~ 74 (85)
T 2k7v_A 74 G 74 (85)
T ss_dssp S
T ss_pred C
Confidence 4
No 126
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.34 E-value=2.3e-11 Score=140.14 Aligned_cols=173 Identities=14% Similarity=0.186 Sum_probs=98.0
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhh-------hhh
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKN-------SFF 461 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~-------~~~ 461 (866)
.+|||+|||||+||++||..|++.|.+|+|||+.. ..+|+ .+|.|+..........+.+.. ...
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~-----~~iG~----~~Cnps~GGia~g~lv~eldalgg~~~~~~d 96 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA-----DTIGQ----MSCNPAIGGIAKGIVVREIDALGGEMGKAID 96 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG-----GGTTC----CCSCSEEECTTHHHHHHHHHHHTCSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc-----cccCC----cCccccccccchHHHHHHHHHhhhHHHHHhh
Confidence 35999999999999999999999999999999862 13442 245554321111111111110 000
Q ss_pred hcCccccc------c-------ccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEEEEcCC
Q psy9583 462 EYGINTQN------V-------TLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQIINKT 527 (866)
Q Consensus 462 ~~gi~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~v~~~~ 527 (866)
..++.... . ..+-. .+...+...+++ .+++++.+.+..+.. .+.....|.+.+
T Consensus 97 ~~gi~f~~l~~~kGpav~~~r~~~Dr~-----------~~~~~L~~~Le~~~GVeI~~~~Vt~L~~--e~g~V~GV~t~d 163 (637)
T 2zxi_A 97 QTGIQFKMLNTRKGKAVQSPRAQADKK-----------RYREYMKKVCENQENLYIKQEEVVDIIV--KNNQVVGVRTNL 163 (637)
T ss_dssp HHEEEEEEESTTSCGGGCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEESCEEEEEE--SSSBEEEEEETT
T ss_pred hcccceeecccccCccccchhhhCCHH-----------HHHHHHHHHHHhCCCCEEEEeEEEEEEe--cCCEEEEEEECC
Confidence 11111100 0 01111 122234445666 599997665544422 112223355566
Q ss_pred ceEEEecEEEEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEe
Q psy9583 528 KETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILE 600 (866)
Q Consensus 528 g~~i~~d~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~ 600 (866)
|..+.+|.||+|||+.+..+..++. ..+. +.+ .|+.++++++..|.++|.++..+.
T Consensus 164 G~~i~AdaVVLATG~~s~~~~~~G~---~~~~----------~Gr----~G~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 164 GVEYKTKAVVVTTGTFLNGVIYIGD---KMIP----------GGR----LGEPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp SCEEECSEEEECCTTCBTCEEEETT---EEEE----------CSB----TTBCCBCTHHHHHHHTTCCCEEEE
T ss_pred CcEEEeCEEEEccCCCccCceeccc---eecC----------CCC----CCchhHHHHHHHHHhcCCceEEec
Confidence 7889999999999987653321111 0010 122 246678999999999998876653
No 127
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.26 E-value=2e-11 Score=100.42 Aligned_cols=64 Identities=19% Similarity=0.373 Sum_probs=61.8
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEec
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~ 79 (866)
.+|+|.+|++++||.|++||+|+++|++|...+|.||.+|+|.++++++|+.|..|++|+.+..
T Consensus 6 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 6 MAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSN 69 (72)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEGG
T ss_pred ccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEeC
Confidence 4699999999999999999999999999999999999999999999999999999999999874
No 128
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.25 E-value=1.1e-10 Score=135.19 Aligned_cols=172 Identities=17% Similarity=0.178 Sum_probs=98.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhh-------hhhh
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKN-------SFFE 462 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~-------~~~~ 462 (866)
+|||+|||||+||++||..|++.|.+|+|||+.. ..+|+. +|.|+.......+..+.+.. ....
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~-----~~iG~~----~c~ps~gGia~~~lv~el~al~g~~~~~~d~ 91 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL-----SAVARM----SCNPAIGGVAKGQITREIDALGGEMGKAIDA 91 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG-----GGTTCC----SSCSEEECHHHHHHHHHHHHHTCSHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc-----cccCCC----ccccchhhhhHHHHHHHHHhcccHHHHHHHh
Confidence 5999999999999999999999999999999862 135542 35554322221222221111 0001
Q ss_pred cCccccc-------------cccCHHHHHHHHHHHHHhhhhhHHHHHHh-CCcEEEEeEEEEeccccCcccEEE-EEcCC
Q psy9583 463 YGINTQN-------------VTLNLQKMLERKNNIIKKNNSGILFLFKK-NKIKFFHGHAIFTGKIQNNFHEIQ-IINKT 527 (866)
Q Consensus 463 ~gi~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~v~~g~~v~~~~~~~~~~~v~-v~~~~ 527 (866)
.++.... ...+-.. +...+...+++ .+++++.+.+..+.. +.+.+. |.+.+
T Consensus 92 ~gi~f~~l~~~kgpav~~~r~~~Dr~~-----------l~~~L~~~l~~~~GV~I~~~~V~~L~~---d~g~V~GV~t~~ 157 (641)
T 3cp8_A 92 TGIQFRMLNRSKGPAMHSPRAQADKTQ-----------YSLYMRRIVEHEPNIDLLQDTVIGVSA---NSGKFSSVTVRS 157 (641)
T ss_dssp HEEEEEEECSSSCTTTCEEEEEECHHH-----------HHHHHHHHHHTCTTEEEEECCEEEEEE---ETTEEEEEEETT
T ss_pred cCCchhhcccccCccccchhhhcCHHH-----------HHHHHHHHHHhCCCCEEEeeEEEEEEe---cCCEEEEEEECC
Confidence 1111100 0111111 12233445566 499997775554422 123443 55566
Q ss_pred ceEEEecEEEEecCCCCcCCCCCcCCCceEecchhhhccccCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEe
Q psy9583 528 KETITAKYIIIATGSKARSFPGVKFDENLILSNKGALEMINVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILE 600 (866)
Q Consensus 528 g~~i~~d~lViATGs~p~~~p~~~~~~~~~~t~~~~~~~~~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~ 600 (866)
|..+.+|.||+|||+.+..+..++ ..-+. ..+++ |+.++++++..|.+.|.+|..+.
T Consensus 158 G~~i~Ad~VVLATG~~s~~~i~~G---~~~~~----------~g~~v---G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 158 GRAIQAKAAILACGTFLNGLIHIG---MDHFP----------GGRST---AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp SCEEEEEEEEECCTTCBTCEEEET---TEEEE----------CSSST---TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred CcEEEeCEEEECcCCCCCccceee---eeeec----------ccccc---CCchhhhhHHHHHhCCceEEeec
Confidence 778999999999998765322111 00000 11211 46788899999999999987653
No 129
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.24 E-value=1.9e-12 Score=112.14 Aligned_cols=76 Identities=14% Similarity=0.260 Sum_probs=29.4
Q ss_pred cEEEecCCCCCCC----CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 3 LIEVKIPKLSESI----SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 3 ~~~~~~p~~g~~~----~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
..+|++|+.++.. ..|+|.+|++++||.|++||+|+++|++|+..+|+||.+|+|.++.+++|+.|.+|++|+.++
T Consensus 15 ~~~v~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 15 TENLYFQSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp ---------CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC------------------------------------
T ss_pred CEEEEcCCCCceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEEEEEC
Confidence 4578999998875 589999999999999999999999999999999999999999999999999999999998874
No 130
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.24 E-value=6.9e-12 Score=106.12 Aligned_cols=65 Identities=22% Similarity=0.359 Sum_probs=62.0
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
.+|+|.+|++++||.|++||+|++||++|+..+|+||.+|+|.++. ++|+.|.+|++|+.++...
T Consensus 12 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~~~ 76 (84)
T 2kcc_A 12 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLELDD 76 (84)
T ss_dssp SSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEECSC
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeCCC
Confidence 5699999999999999999999999999999999999999999999 9999999999999998654
No 131
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=5.1e-11 Score=104.49 Aligned_cols=65 Identities=22% Similarity=0.366 Sum_probs=61.9
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
.+|+|.+|++++||.|++||+|+++|++|+..+|+||.+|+|. +++++|+.|..|++|+.+....
T Consensus 24 ~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~~~ 88 (100)
T 2dn8_A 24 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLELDD 88 (100)
T ss_dssp SCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEECCSC
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEcCC
Confidence 5799999999999999999999999999999999999999999 9999999999999999997543
No 132
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.17 E-value=1.3e-10 Score=134.60 Aligned_cols=33 Identities=27% Similarity=0.536 Sum_probs=31.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||+|||||+||++||+.|++ |.+|+||||.+
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 5899999999999999999999 99999999973
No 133
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.15 E-value=1.3e-10 Score=133.70 Aligned_cols=43 Identities=23% Similarity=0.262 Sum_probs=39.0
Q ss_pred EEeCCCCCC-CCCCEEEecccCCCCCcHHHHHHHHHHHHHHHhC
Q psy9583 695 IIVNDNCET-NIPNIYAIGDVVRGPMLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 695 i~Vd~~l~T-s~~~VyA~GD~a~~~~~~~~A~~~g~~aa~~i~g 737 (866)
|.+|+.|+| +++|+|+|||+++...-...|..+|..+|+.|+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~ 540 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVAR 540 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCChhhHHHHHHHHHHHHHHHHHH
Confidence 678899998 8999999999999888889999999999998864
No 134
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.14 E-value=1.7e-10 Score=95.35 Aligned_cols=63 Identities=24% Similarity=0.464 Sum_probs=60.6
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
..|+|.+|++++||.|++||+|++++++|...+|.||.+|+|.++.+++|+.|..|++|+.++
T Consensus 12 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 12 MPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 469999999999999999999999999999999999999999999999999999999999874
No 135
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.13 E-value=3.4e-10 Score=132.72 Aligned_cols=34 Identities=35% Similarity=0.409 Sum_probs=32.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCC--CeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~ 423 (866)
.+||||||||+||++||+.|++.| .+|+||||..
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 589999999999999999999999 9999999973
No 136
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.11 E-value=1.7e-10 Score=96.12 Aligned_cols=63 Identities=25% Similarity=0.377 Sum_probs=60.7
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.+|+|.+|++++||.|++||+|++++++|+..+|.||.+|+|.++.+++|+.|..|++|+.++
T Consensus 15 ~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 15 LAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 569999999999999999999999999999999999999999999999999999999999874
No 137
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.10 E-value=1.8e-10 Score=100.67 Aligned_cols=67 Identities=18% Similarity=0.310 Sum_probs=63.5
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCCc
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDIS 82 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~~ 82 (866)
..|+|.+|++++||.|++||+|++++++|+..+|.||.+|+|.++.+++|+.|..|++|+.+.....
T Consensus 21 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~~~~ 87 (99)
T 2ejm_A 21 MTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEES 87 (99)
T ss_dssp SSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEECCCCS
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEECCCc
Confidence 4799999999999999999999999999999999999999999999999999999999999986543
No 138
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.09 E-value=1.8e-10 Score=96.69 Aligned_cols=62 Identities=19% Similarity=0.320 Sum_probs=58.0
Q ss_pred eEEEEE-------EEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLN-------WHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~-------w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|.+ |++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.|..|++|+.++
T Consensus 12 ~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 12 VGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp SEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred CeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 366665 69999999999999999999999999999999999999999999999999999874
No 139
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.04 E-value=8e-10 Score=117.31 Aligned_cols=166 Identities=13% Similarity=0.094 Sum_probs=113.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhc-CCcEEEEecCCcCCCc--------------------------------------ccH
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL-GSEVTILEMSSNFLNT--------------------------------------VDE 611 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~-g~~Vtli~~~~~~l~~--------------------------------------~d~ 611 (866)
.+|+|||||++|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999998754210 224
Q ss_pred HHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeE-EEEEee-------CCCCccceeEEEeccEEEEeeccccCCCCCCc
Q psy9583 612 EIAKKAFHLLNK-QGLNIILNTKIHDIKINKENV-LINYSN-------KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNI 682 (866)
Q Consensus 612 ~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~-~v~~~~-------~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l 682 (866)
++...+.+.+.+ .|+++++++.|+++..+++.+ .+.+.. .++ ..++...+.+|.||+|+|..++...+..
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g-~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQ-SCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTS-SCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCcc-ccCceEEEECCEEEECCCCchHHHHHHH
Confidence 555566666765 699999999999998776654 233321 011 0011347999999999998877643211
Q ss_pred cc---cC--eeecCCCcEEeCC-------CCCCCCCCEEEecccCC----CC---CcHHHHHHHHHHHHHHHhC
Q psy9583 683 DK---IG--LKVNENNFIIVND-------NCETNIPNIYAIGDVVR----GP---MLAHKAEEEGIMVAEHISG 737 (866)
Q Consensus 683 ~~---~g--l~~~~~G~i~Vd~-------~l~Ts~~~VyA~GD~a~----~~---~~~~~A~~~g~~aa~~i~g 737 (866)
+. .+ +.+.....+.+|. +.+|+.|++|++||++. .| +.+..+..+|+.+|.++..
T Consensus 199 ~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 11 11 1111122244442 34677899999999973 11 2467889999999999975
No 140
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.00 E-value=1.4e-09 Score=128.17 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=32.0
Q ss_pred ccceeeecCCccHHHHHHHHHHC------CCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL------GFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~------g~~V~liek~~ 423 (866)
++||||||||+||++||+.|++. |.+|+||||..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 58999999999999999999997 99999999973
No 141
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=98.93 E-value=1.3e-09 Score=128.68 Aligned_cols=62 Identities=23% Similarity=0.301 Sum_probs=60.4
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.++
T Consensus 620 ~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 620 PGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp CEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred cEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 49999999999999999999999999999999999999999999999999999999999885
No 142
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.92 E-value=1.5e-09 Score=121.43 Aligned_cols=149 Identities=20% Similarity=0.285 Sum_probs=80.5
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCccccc--CCCccceec--cccchhHHHhhH---------HH
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFA--LGGTCTNVG--CIPSKALLQTSH---------SF 453 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~--~GG~~~~~g--~~P~~~~~~~~~---------~~ 453 (866)
|+.++||+|||||+||++||..|++.|.+|+|||+.+.+..... -||.|.... +.+...+..... ..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 44569999999999999999999999999999999832211111 134443222 222111000000 01
Q ss_pred HHHhhhhhhcCcccccccc--CHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceE
Q psy9583 454 ENVKNSFFEYGINTQNVTL--NLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKET 530 (866)
Q Consensus 454 ~~~~~~~~~~gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~ 530 (866)
.....++...|+....... -+.. .. ...+...+...+++.|++++.++.+. +.. ....+.|.+.++ +
T Consensus 104 ~~~~~~~~~~Gi~~~~~~~g~~~~~--~~----~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~---~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 104 QDFVALVERHGIGWHEKTLGQLFCD--HS----AKDIIRMLMAEMKEAGVQLRLETSIGEVER---TASGFRVTTSAG-T 173 (417)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEES--SC----HHHHHHHHHHHHHHHTCEEECSCCEEEEEE---ETTEEEEEETTE-E
T ss_pred HHHHHHHHHcCCCcEEeeCCEEeeC--CC----HHHHHHHHHHHHHHCCCEEEECCEEEEEEE---eCCEEEEEECCc-E
Confidence 1122223334443211000 0000 00 01122234555667799999887665 322 224577776666 8
Q ss_pred EEecEEEEecCCCCc
Q psy9583 531 ITAKYIIIATGSKAR 545 (866)
Q Consensus 531 i~~d~lViATGs~p~ 545 (866)
+.+|+||+|||+.+.
T Consensus 174 i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 174 VDAASLVVASGGKSI 188 (417)
T ss_dssp EEESEEEECCCCSSC
T ss_pred EEeeEEEECCCCccC
Confidence 999999999998763
No 143
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=98.92 E-value=3.2e-10 Score=86.45 Aligned_cols=42 Identities=40% Similarity=0.816 Sum_probs=38.5
Q ss_pred ccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhh
Q psy9583 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSS 142 (866)
Q Consensus 100 ~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~ 142 (866)
++.+||+||++|+|+|||++.| +|||++|||+++||++|++.
T Consensus 7 ~v~aSPaaRrlA~e~gIdl~~V-~GTG~~GRItk~DV~~~~~~ 48 (58)
T 3rnm_E 7 KTLATPAVRNLAMENNIKLSEV-VGSGKDGRILKEDILNYLEK 48 (58)
T ss_dssp -CCCCHHHHHHHHHTTCCGGGC-CCCSGGGCCCHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHcCCCHHHC-CCCCCCCceeHHHHHHHHhh
Confidence 4678999999999999999999 89999999999999999753
No 144
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=98.91 E-value=5.6e-10 Score=79.88 Aligned_cols=38 Identities=29% Similarity=0.528 Sum_probs=36.0
Q ss_pred ccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhh
Q psy9583 102 IVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140 (866)
Q Consensus 102 ~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~ 140 (866)
.+||++|++|+|+|+|++.| +|||++|||+++||++|+
T Consensus 2 ~asP~ar~la~e~gidl~~v-~gtG~~gri~k~Dv~~~~ 39 (41)
T 2eq9_C 2 LAVPAARKLARELGIPIEEV-PGSGPLGRVRVEDVRAYA 39 (41)
T ss_dssp CBCHHHHHHHHHTTCCGGGS-CCCSTTCCBCHHHHHHHH
T ss_pred CCChHHHHHHHHcCCChhhc-CCCCCCCcccHHHHHHHh
Confidence 46999999999999999999 899999999999999886
No 145
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.89 E-value=4.7e-09 Score=123.76 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=32.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
..+||||||||.||++||+.|++.|.+|+||||..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 35899999999999999999999999999999973
No 146
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=98.87 E-value=6.3e-10 Score=79.13 Aligned_cols=37 Identities=30% Similarity=0.633 Sum_probs=35.4
Q ss_pred cchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhh
Q psy9583 103 VMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140 (866)
Q Consensus 103 ~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~ 140 (866)
+||++|++|+++|+|++.| +|||++|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v-~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq8_C 2 AAPSIRRLARELGVDLTRL-RGTGLAGRITEEDVRRAA 38 (40)
T ss_dssp CCHHHHHHHHHHTCCGGGC-CCCSTTSCCCHHHHHHHH
T ss_pred CChHHHHHHHHhCCChhhc-CCCCCCCceeHHHHHHHh
Confidence 5899999999999999999 899999999999999886
No 147
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=98.87 E-value=6e-10 Score=79.25 Aligned_cols=37 Identities=38% Similarity=0.800 Sum_probs=34.7
Q ss_pred cchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhh
Q psy9583 103 VMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVL 140 (866)
Q Consensus 103 ~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~ 140 (866)
+||++|++|+++|+|++.| .|||++|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v-~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPAEV-QGTGLGGRILKEDVMRHL 38 (40)
T ss_dssp CCHHHHHHHHHTTCCTTTS-CCCSSSSCCCHHHHTTC-
T ss_pred CCcHHHHHHHHhCCChhhc-CCCCCCCcccHHHHHHHh
Confidence 5899999999999999999 899999999999999875
No 148
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=98.86 E-value=3.1e-09 Score=132.07 Aligned_cols=61 Identities=23% Similarity=0.342 Sum_probs=59.7
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEE
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALI 77 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~ 77 (866)
.|+|.+|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|
T Consensus 1175 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1175 TGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp CEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 3999999999999999999999999999999999999999999999999999999999987
No 149
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=98.81 E-value=4.9e-09 Score=130.02 Aligned_cols=64 Identities=22% Similarity=0.396 Sum_probs=61.0
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|+.+
T Consensus 1085 ~G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G~~V~~g~~l~~i~~~ 1148 (1150)
T 3hbl_A 1085 PGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEKA 1148 (1150)
T ss_dssp SEEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTTCEECTTBEEEEEC--
T ss_pred eEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 5999999999999999999999999999999999999999999999999999999999999754
No 150
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=98.80 E-value=5e-10 Score=132.12 Aligned_cols=64 Identities=17% Similarity=0.378 Sum_probs=0.0
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.++++
T Consensus 610 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~~ 673 (675)
T 3u9t_A 610 NGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDEN 673 (675)
T ss_dssp ----------------------------------------------------------------
T ss_pred CEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEecC
Confidence 4999999999999999999999999999999999999999999999999999999999999754
No 151
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=98.80 E-value=1.6e-09 Score=81.12 Aligned_cols=41 Identities=41% Similarity=0.734 Sum_probs=37.6
Q ss_pred ccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhh
Q psy9583 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLS 141 (866)
Q Consensus 100 ~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~ 141 (866)
...+||.+|++|+++|||++.| .|||++|||+++||++|+.
T Consensus 9 ~~~asP~aR~lA~e~gidl~~V-~gtG~~GrI~k~DV~~~~~ 49 (51)
T 1bal_A 9 NDALSPAIRRLLAEHNLDASAI-KGTGVGGRLTREDVEKHLA 49 (51)
T ss_dssp SCCCCGGGTTHHHHTTCCTTSS-CCCSTTSCCCHHHHTTTSC
T ss_pred CCCCChHHHHHHHHcCCCcccc-CCCCCCCcccHHHHHHHhc
Confidence 3567999999999999999999 8999999999999998864
No 152
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=98.76 E-value=2.3e-09 Score=79.70 Aligned_cols=40 Identities=40% Similarity=0.748 Sum_probs=37.4
Q ss_pred cccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhh
Q psy9583 101 TIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLS 141 (866)
Q Consensus 101 ~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~ 141 (866)
..+||++|++|+++|+|++.| .|||++|||+++||++|+.
T Consensus 7 ~~asP~ar~la~e~gidl~~v-~gtG~~Gri~k~Dv~~~~~ 46 (49)
T 1w85_I 7 VIAMPSVRKYAREKGVDIRLV-QGTGKNGRVLKEDIDAFLA 46 (49)
T ss_dssp CCCCHHHHHHHHHTTCCTTTS-CCCSGGGCCCHHHHHHHHC
T ss_pred ccCChHHHHHHHHcCCCcccc-CCCCCCCcccHHHHHHHHh
Confidence 457999999999999999999 8999999999999999874
No 153
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.75 E-value=2.7e-08 Score=109.37 Aligned_cols=36 Identities=33% Similarity=0.424 Sum_probs=32.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|+.++||+|||||++|+++|+.|++.|++|+|||+.
T Consensus 1 M~~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 444699999999999999999999999999999997
No 154
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.74 E-value=3.9e-08 Score=104.21 Aligned_cols=134 Identities=19% Similarity=0.246 Sum_probs=75.9
Q ss_pred ccceeeecCCccHHHHHHHHHHC-CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQ 468 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~ 468 (866)
++||+|||||++|+++|..|++. |.+|+|||+. +.+||.+...++.......... .. ..+..+|++..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~------~~~gg~~~~~~~~~~~~~~~~~-~~----~~l~~~G~~~~ 107 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS------VSPGGGAWLGGQLFSAMIVRKP-AH----LFLDEIGVAYD 107 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESS------SSCCTTTTCCSTTCCCEEEETT-TH----HHHHHHTCCCE
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECC------CCCCCceecCCcchHHHHcCcH-HH----HHHHHcCCCcc
Confidence 58999999999999999999997 9999999998 4556554444433322111110 11 11223344332
Q ss_pred cc---cc--CHHHHHHHHHHHHHhhhhhHHHHH-HhCCcEEEEeEEEE-eccccCcccEEEEEc-----C--C-----ce
Q psy9583 469 NV---TL--NLQKMLERKNNIIKKNNSGILFLF-KKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-----K--T-----KE 529 (866)
Q Consensus 469 ~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-----~--~-----g~ 529 (866)
.. .. +...+ ...+...+ ++.|++++.++.+. +...+.....+.+.. . + ..
T Consensus 108 ~~~~~~~~~~~~~~-----------~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~ 176 (284)
T 1rp0_A 108 EQDTYVVVKHAALF-----------TSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPN 176 (284)
T ss_dssp ECSSEEEESCHHHH-----------HHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCE
T ss_pred cCCCEEEecCHHHH-----------HHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceE
Confidence 10 00 11111 11122233 34699999987765 322111111233321 1 2 16
Q ss_pred EEEecEEEEecCCCCc
Q psy9583 530 TITAKYIIIATGSKAR 545 (866)
Q Consensus 530 ~i~~d~lViATGs~p~ 545 (866)
.+.+|.||+|+|..+.
T Consensus 177 ~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 177 VMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EEEEEEEEECCCSSST
T ss_pred EEECCEEEECCCCchH
Confidence 7999999999998664
No 155
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.73 E-value=5.9e-08 Score=95.15 Aligned_cols=110 Identities=19% Similarity=0.269 Sum_probs=69.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
||++|||||++|+.+|..|++.|.+|+|||+.+. .+.... . +. . + .+++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~-----~~~~~~-~---~~---------------~-~--~~~~~--- 51 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRS-----KVKGVS-R---VP---------------N-Y--PGLLD--- 51 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-----TTTTCS-C---CC---------------C-S--TTCTT---
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC-----cccCch-h---hh---------------c-c--CCCcC---
Confidence 7999999999999999999999999999998621 010000 0 00 0 0 01100
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
...-.. +...+...+++.|++++.+....+.. ....+.+.++++ ++.+|.||+|+|..|.
T Consensus 52 ~~~~~~-----------~~~~l~~~~~~~gv~v~~~~v~~i~~---~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 52 EPSGEE-----------LLRRLEAHARRYGAEVRPGVVKGVRD---MGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp CCCHHH-----------HHHHHHHHHHHTTCEEEECCCCEEEE---CSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred CCCHHH-----------HHHHHHHHHHHcCCEEEeCEEEEEEE---cCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 011111 12234556778899999883222322 223456666666 8999999999999874
No 156
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.70 E-value=4.2e-08 Score=100.64 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=71.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
++||+|||||++|+++|..|++.|.+|+|||+.. ...| .+ |.|........+....+.. ..+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~-----~~~G-~~----~~~~~~~~~~~~~~~~~~d---~~g----- 64 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL-----DAVM-MP----FLPPKPPFPPGSLLERAYD---PKD----- 64 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG-----GGTT-CC----SSCCCSCCCTTCHHHHHCC---TTC-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC-----CcCC-cc----cCccccccchhhHHhhhcc---CCC-----
Confidence 5999999999999999999999999999999962 2233 22 2221100000011111100 000
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhC-CcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKN-KIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~ 545 (866)
.+- ..+...+...+++. +++++......+.. .+...+.+.+.++.++.+|+||+|||..+.
T Consensus 65 --~~~-----------~~~~~~l~~~~~~~~gv~i~~~~v~~i~~--~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 65 --ERV-----------WAFHARAKYLLEGLRPLHLFQATATGLLL--EGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp --CCH-----------HHHHHHHHHHHHTCTTEEEEECCEEEEEE--ETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred --CCH-----------HHHHHHHHHHHHcCCCcEEEEeEEEEEEE--eCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 000 11223345556676 99988554333322 111223455566778999999999998644
No 157
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=98.67 E-value=8.1e-09 Score=80.49 Aligned_cols=41 Identities=32% Similarity=0.581 Sum_probs=38.1
Q ss_pred cccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhh
Q psy9583 101 TIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSS 142 (866)
Q Consensus 101 ~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~ 142 (866)
..+||++|++|+++|||++.| .|||++|||+++||++|+..
T Consensus 5 ~~asPaaRklA~e~gidl~~V-~gtG~~GrItk~DV~~~~~~ 45 (62)
T 1w4i_A 5 VAAMPAARRLAKELGIDLSKV-KGTGPGGVITVEDVKRYAEE 45 (62)
T ss_dssp SEECHHHHHHHHHHTCCGGGS-CCCSTTSEECHHHHHHHHHH
T ss_pred ccCChHHHHHHHHhCCChhhc-CCCCCCCcccHHHHHHHHhc
Confidence 457999999999999999999 89999999999999999863
No 158
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.64 E-value=1.7e-07 Score=109.56 Aligned_cols=33 Identities=33% Similarity=0.571 Sum_probs=32.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||||+||++||+.|++.|.+|+||||.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~ 158 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKE 158 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 589999999999999999999999999999998
No 159
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=98.64 E-value=8.8e-09 Score=80.57 Aligned_cols=41 Identities=34% Similarity=0.494 Sum_probs=38.0
Q ss_pred cccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhh
Q psy9583 101 TIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSS 142 (866)
Q Consensus 101 ~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~ 142 (866)
..+||+||++|+++|+|++.| +|||++|||+++||++|+..
T Consensus 10 ~~asPaaRklA~e~gidl~~V-~GTG~~GRItk~DV~~~~~~ 50 (64)
T 2f60_K 10 FRLSPAARNILEKHSLDASQG-TATGPRGIFTKEDALKLVQL 50 (64)
T ss_dssp HHBCHHHHHHHHHTTCCGGGS-CCCSGGGCBCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHcCCChhhc-CCCCCCCcccHHHHHHHHhc
Confidence 457999999999999999999 89999999999999999853
No 160
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=98.64 E-value=1.4e-08 Score=81.06 Aligned_cols=42 Identities=40% Similarity=0.831 Sum_probs=38.6
Q ss_pred ccccchhHHHhhhhCCCCcccccCCCCCCCceeehhHHhhhhh
Q psy9583 100 NTIVMPSAKKILSDNNLEISKINNGTGKDGRIIKEDVLKVLSS 142 (866)
Q Consensus 100 ~~~~~p~~r~~a~~~~~d~~~v~~gtg~~g~i~~~Dv~~~~~~ 142 (866)
...++|++|+||+++|||++.| .|||++|||+++||++|+..
T Consensus 15 ~~~aSPaaRklA~e~gidl~~V-~GTG~~GRItk~DV~~~~~~ 56 (70)
T 2coo_A 15 KTLATPAVRRLAMENNIKLSEV-VGSGKDGRILKEDILNYLEK 56 (70)
T ss_dssp SCCSCHHHHHHHHHHTCCGGGS-CCCSTTSCCCHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHhCCCcccc-CCCCCCCceeHHHHHHHHhc
Confidence 3568999999999999999999 89999999999999999753
No 161
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.61 E-value=9.1e-08 Score=107.49 Aligned_cols=137 Identities=20% Similarity=0.217 Sum_probs=77.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhh--hhcCcc-
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSF--FEYGIN- 466 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~--~~~gi~- 466 (866)
++||+|||||++|+++|..|++.|++|+|+|+.+.+. ...|.+....|.+ ++......+.+.... ...++.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~---~~~g~~~~~~~~~---~l~~~g~~~~~~~~~~~~~~~~~~ 78 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR---FVIGESLLPRCME---HLDEAGFLDAVKAQGFQQKFGAKF 78 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC---CCSCCBCCGGGHH---HHHHTTCHHHHHHTTCEEECEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC---CcccCcccHhHHH---HHHHcCChHHHHHcCCcccCCcEE
Confidence 4899999999999999999999999999999973221 1223343333332 111111111111100 000000
Q ss_pred ----------cc---------ccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcC
Q psy9583 467 ----------TQ---------NVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINK 526 (866)
Q Consensus 467 ----------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~ 526 (866)
.. ...++-.. +...+...+++.|++++.++.+. +.. +.+...+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-----------~~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~~~v~v~~~ 146 (421)
T 3nix_A 79 VRGKEIADFNFSDQFSNGWNWTWQVPRGN-----------FDKTLADEAARQGVDVEYEVGVTDIKF-FGTDSVTTIEDI 146 (421)
T ss_dssp EETTEEEEEETTSCSSCSCCCEEECCHHH-----------HHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEET
T ss_pred EeCCeeEEEeehhhcCCCCCceeEECHHH-----------HHHHHHHHHHhCCCEEEcCCEEEEEEE-eCCEEEEEEEcC
Confidence 00 00111111 12224444556699999987765 322 122334666666
Q ss_pred Cce--EEEecEEEEecCCCC
Q psy9583 527 TKE--TITAKYIIIATGSKA 544 (866)
Q Consensus 527 ~g~--~i~~d~lViATGs~p 544 (866)
+|. ++.+|.||.|+|...
T Consensus 147 ~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 147 NGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp TSCEEEEEEEEEEECCGGGC
T ss_pred CCCEEEEEcCEEEECCCCch
Confidence 665 799999999999765
No 162
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.59 E-value=1.7e-07 Score=106.14 Aligned_cols=150 Identities=23% Similarity=0.361 Sum_probs=77.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCccccc--CCCccceecccc-chhHHH---hhH---------HHH
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFA--LGGTCTNVGCIP-SKALLQ---TSH---------SFE 454 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~--~GG~~~~~g~~P-~~~~~~---~~~---------~~~ 454 (866)
++||+|||||++|++||..|++.|.+|+|||+.+.+..... -||.|......+ ...+.. ... ...
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 48999999999999999999999999999999732211100 123332221111 000000 000 001
Q ss_pred HHhhhhhhcCccccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEe
Q psy9583 455 NVKNSFFEYGINTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITA 533 (866)
Q Consensus 455 ~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~ 533 (866)
....++...|++...... ..++.. ......+...+...+++.||+++.++.+. +.. + +...+.|...++.++.+
T Consensus 106 ~~~~~~~~~G~~~~~~~~--g~~~p~-~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~-~~~v~~V~~~~G~~i~A 180 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDH--GRMFPV-SNKAQSVVDALLTRLKDLGVKIRTNTPVETIEY-E-NGQTKAVILQTGEVLET 180 (447)
T ss_dssp HHHHHHHHTTCCEEECGG--GEEEET-TCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-E-TTEEEEEEETTCCEEEC
T ss_pred HHHHHHHhcCCceEEeeC--CEEECC-CCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-c-CCcEEEEEECCCCEEEC
Confidence 111122333432210000 000000 00001122334555677899999887665 322 1 12225565566667999
Q ss_pred cEEEEecCCCC
Q psy9583 534 KYIIIATGSKA 544 (866)
Q Consensus 534 d~lViATGs~p 544 (866)
|.||+|||+.+
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999876
No 163
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.58 E-value=2.7e-07 Score=107.75 Aligned_cols=35 Identities=29% Similarity=0.498 Sum_probs=32.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
..+||+|||||++|++||+.|++.|.+|+||||.+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45899999999999999999999999999999983
No 164
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.57 E-value=6.3e-08 Score=88.38 Aligned_cols=71 Identities=17% Similarity=0.273 Sum_probs=59.3
Q ss_pred EecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEE---eecCCCEEe---cCC-EEEEEe
Q psy9583 6 VKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKI---IITDGSIVT---SNQ-VIALID 78 (866)
Q Consensus 6 ~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~---~~~~g~~v~---~g~-~l~~~~ 78 (866)
+.+|.+|+ + .-++| +++||.|++||+|++||++|+..+|.||.+|+|.++ +++.++.|. .|+ .|+.+.
T Consensus 39 ~a~~~lG~-i---~~V~l-p~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~ 113 (136)
T 1zko_A 39 HAQEQLGD-V---VYVDL-PEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKME 113 (136)
T ss_dssp HHHHHHCS-E---EEEEC-CCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEE
T ss_pred hhcccCCC-c---EEEEe-cCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEE
Confidence 44566655 2 22333 499999999999999999999999999999999999 888999998 888 999998
Q ss_pred cCC
Q psy9583 79 TDI 81 (866)
Q Consensus 79 ~~~ 81 (866)
...
T Consensus 114 ~~~ 116 (136)
T 1zko_A 114 ISD 116 (136)
T ss_dssp ESC
T ss_pred ECC
Confidence 543
No 165
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.55 E-value=6.3e-08 Score=87.43 Aligned_cols=66 Identities=24% Similarity=0.346 Sum_probs=60.4
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEeccee-----------------------------eEEecCCCeEEEEEeecCCC
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKVI-----------------------------LELPAPQDGIINKIIITDGS 66 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~-----------------------------~~i~~~~~G~~~~~~~~~g~ 66 (866)
.+|+|.+|++++||.|++||+|+++++.++. ..|.||.+|+|.++.+++|+
T Consensus 8 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~ 87 (116)
T 2k32_A 8 VSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIGD 87 (116)
T ss_dssp SCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTTC
T ss_pred CCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEECCCCC
Confidence 4799999999999999999999999987554 48999999999999999999
Q ss_pred EEecC-CEEEEEecCC
Q psy9583 67 IVTSN-QVIALIDTDI 81 (866)
Q Consensus 67 ~v~~g-~~l~~~~~~~ 81 (866)
.|..| ++|+.|....
T Consensus 88 ~v~~g~~~l~~i~~~~ 103 (116)
T 2k32_A 88 YVSASTTELVRVTNLN 103 (116)
T ss_dssp EECTTTSCCEEEECSC
T ss_pred EEcCCCcEEEEEECCC
Confidence 99999 9999998654
No 166
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.55 E-value=2e-08 Score=117.42 Aligned_cols=62 Identities=16% Similarity=0.310 Sum_probs=60.0
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
+|+|++|+|++||.|++||+|++||+||+..+|+||.+|+|.++.+++|+.|.+|++|+.++
T Consensus 657 ~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i~ 718 (718)
T 3bg3_A 657 PGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEIE 718 (718)
T ss_dssp CEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECBC
T ss_pred CeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999998763
No 167
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.55 E-value=7.9e-08 Score=106.68 Aligned_cols=36 Identities=42% Similarity=0.747 Sum_probs=33.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|+ +|||+||||||||+++|..|++.|++|+||||.+
T Consensus 2 Me-~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 2 ME-TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EE-EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CC-CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 54 5999999999999999999999999999999974
No 168
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.54 E-value=2.5e-07 Score=102.45 Aligned_cols=36 Identities=25% Similarity=0.424 Sum_probs=33.6
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|+.++||+|||||++|+++|++|++.|++|+|||+.
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 555699999999999999999999999999999996
No 169
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.53 E-value=6e-07 Score=103.43 Aligned_cols=34 Identities=32% Similarity=0.406 Sum_probs=32.5
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.++||||||+|+||++||+.|++.|.+|+||||.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~ 73 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERT 73 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3599999999999999999999999999999998
No 170
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.53 E-value=1.9e-08 Score=115.45 Aligned_cols=144 Identities=17% Similarity=0.140 Sum_probs=100.1
Q ss_pred EecEEEEecCCCCcCCCCCcCCCceEe---cchhhhcc--------------ccCCCeEEEECCcHHHHHHHHHHHhcCC
Q psy9583 532 TAKYIIIATGSKARSFPGVKFDENLIL---SNKGALEM--------------INVPKKLCIIGAGVIGLEIGSIWRRLGS 594 (866)
Q Consensus 532 ~~d~lViATGs~p~~~p~~~~~~~~~~---t~~~~~~~--------------~~~~~~vvVIGgG~~glE~A~~l~~~g~ 594 (866)
.||++++++|++|..+|........++ ...+.... .....+|+|||||+.|+.+|..|++.|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 368899999999875432211111111 11222222 1235789999999999999999999999
Q ss_pred cEEEEecCCcCCCc-----cc----------------------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEc-
Q psy9583 595 EVTILEMSSNFLNT-----VD----------------------------EEIAKKAFHLLNKQGLNIILNTKIHDIKIN- 640 (866)
Q Consensus 595 ~Vtli~~~~~~l~~-----~d----------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~- 640 (866)
+|+++++.+.+... .+ .++.+.+.+.+++.|+++++++.|+++..+
T Consensus 117 ~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~ 196 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPP 196 (497)
T ss_dssp EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCC
T ss_pred eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEec
Confidence 99999998765310 01 566677788888899999999999999864
Q ss_pred --CCeEEEEEeeC-CCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 641 --KENVLINYSNK-STNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 641 --~~~~~v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
++.+.+.+... +|. ..++.+|.||+|+|..+....
T Consensus 197 ~~~~~~~v~~~~~~~g~----~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 197 RKGSGWRAQLQPNPPAQ----LASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp STTCCBEEEEESCCCHH----HHTCCBSEEEECCCTTCCCTT
T ss_pred CCCCEEEEEEEECCCCC----EEEEEcCEEEECCCCCccccc
Confidence 23556666432 341 126889999999999887643
No 171
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.52 E-value=2.7e-07 Score=102.12 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||||++|+++|..|++.|.+|+|||+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 589999999999999999999999999999997
No 172
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.51 E-value=5.5e-07 Score=100.25 Aligned_cols=37 Identities=27% Similarity=0.655 Sum_probs=32.9
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|+.++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 1 M~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 1 MTESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4445899999999999999999999999999999973
No 173
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.50 E-value=2.5e-07 Score=105.99 Aligned_cols=128 Identities=16% Similarity=0.200 Sum_probs=76.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc-
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT- 467 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~- 467 (866)
..+||+|||||++|+++|..|++.|++|+|||+. +.+|+ |...++.|... +. +..+|+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~------~~~g~-~~~~~~~~~~~--------~~----l~~~g~~~~ 151 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKR------IKFSR-HNVLHLWPFTI--------HD----LRALGAKKF 151 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC------SSCCC-CCEEECCHHHH--------HH----HHTTTHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEec------cccCC-CCcccCChhHH--------HH----HHHcCCccc
Confidence 3589999999999999999999999999999997 44543 33333333110 00 11112110
Q ss_pred ------cc-cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-ecccc--CcccEEEEEcC-Cc--eEEEec
Q psy9583 468 ------QN-VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQ--NNFHEIQIINK-TK--ETITAK 534 (866)
Q Consensus 468 ------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~--~~~~~v~v~~~-~g--~~i~~d 534 (866)
.. ..++.. .+...+...+++.|++++.++.+. +...+ .....+.+... +| .++.+|
T Consensus 152 ~~~~~~~~~~~~~~~-----------~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad 220 (497)
T 2bry_A 152 YGRFCTGTLDHISIR-----------QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFD 220 (497)
T ss_dssp CTTTTCTTCCEEEHH-----------HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBS
T ss_pred cccccccccccCCHH-----------HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcC
Confidence 00 001111 122234455667899999987766 32211 12234444333 55 579999
Q ss_pred EEEEecCCCCcC
Q psy9583 535 YIIIATGSKARS 546 (866)
Q Consensus 535 ~lViATGs~p~~ 546 (866)
+||+|+|+.+..
T Consensus 221 ~VV~A~G~~S~~ 232 (497)
T 2bry_A 221 VLISAAGGKFVP 232 (497)
T ss_dssp EEEECCCTTCCC
T ss_pred EEEECCCCCccc
Confidence 999999987653
No 174
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.48 E-value=3.3e-07 Score=101.38 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=32.8
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..++||+|||||++|+++|+.|++.|++|+|||+.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 34699999999999999999999999999999997
No 175
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.47 E-value=4.3e-07 Score=102.53 Aligned_cols=37 Identities=24% Similarity=0.582 Sum_probs=33.9
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCC-eEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGF-KTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~-~V~liek~~ 423 (866)
|.+++||+|||||++|+++|++|++.|+ +|+|+|+.+
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4456999999999999999999999999 999999973
No 176
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.47 E-value=4.1e-07 Score=97.48 Aligned_cols=51 Identities=25% Similarity=0.378 Sum_probs=42.0
Q ss_pred cccceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCccceeccccchh
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTCTNVGCIPSKA 445 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~ 445 (866)
..+||+|||||++|+++|+.|++. |++|+|||+. ..+||.|...++.+.+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~------~~~GGg~~~~g~~~~~~ 130 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAG------VAPGGGAWLGGQLFSAM 130 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESS------SSCCTTTTCCBTTCCCE
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCC------CccCCccccCCccchhh
Confidence 359999999999999999999997 9999999997 56676665656655443
No 177
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.46 E-value=3.5e-07 Score=101.71 Aligned_cols=33 Identities=42% Similarity=0.769 Sum_probs=32.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 499999999999999999999999999999997
No 178
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.46 E-value=4.7e-07 Score=108.11 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=32.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..+||+|||||++|+++|+.|++.|++|+|||+.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 304 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCAD 304 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4589999999999999999999999999999996
No 179
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.45 E-value=5.3e-07 Score=97.77 Aligned_cols=40 Identities=25% Similarity=0.404 Sum_probs=35.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+||+|||||++|+++|..|++.|.+|+|||+. ...||.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~------~~~gg~~~ 42 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS------RGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCGGGC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECC------CCCcccce
Confidence 89999999999999999999999999999997 45666543
No 180
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.45 E-value=9.3e-08 Score=118.99 Aligned_cols=62 Identities=19% Similarity=0.366 Sum_probs=53.9
Q ss_pred eEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEe
Q psy9583 17 EATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALID 78 (866)
Q Consensus 17 ~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~ 78 (866)
.|+|++|+|++||.|++||+|++||+||++.+|+||.+|+|.++.+++|+.|.+|++|+.++
T Consensus 1103 ~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1103 PGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp CEEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred CeEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 69999999999999999999999999999999999999999999999999999999999875
No 181
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.45 E-value=2.1e-06 Score=95.12 Aligned_cols=72 Identities=22% Similarity=0.345 Sum_probs=53.4
Q ss_pred CcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 594 SEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 594 ~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
....++......+. +..+...+.+.+++.|++++.++.|++++.+++++.+.. .++ ++.+|.||+|+|.
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~--~~g-------~~~a~~vV~A~G~ 203 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIET--ANG-------SYTADKLIVSMGA 203 (389)
T ss_dssp TEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEE--TTE-------EEEEEEEEECCGG
T ss_pred CceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEe--CCC-------EEEeCEEEEecCc
Confidence 44566655544332 457778888999999999999999999998776665543 232 6899999999997
Q ss_pred ccC
Q psy9583 674 IPN 676 (866)
Q Consensus 674 ~p~ 676 (866)
..+
T Consensus 204 ~~~ 206 (389)
T 2gf3_A 204 WNS 206 (389)
T ss_dssp GHH
T ss_pred cHH
Confidence 643
No 182
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.43 E-value=9.1e-07 Score=101.97 Aligned_cols=34 Identities=35% Similarity=0.578 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 5899999999999999999999999999999973
No 183
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.40 E-value=7.5e-07 Score=99.30 Aligned_cols=33 Identities=27% Similarity=0.531 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHH-CC-CeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-LG-FKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-~g-~~V~liek~ 422 (866)
++||+|||||++|+++|++|++ .| ++|+|||+.
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~ 55 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKG 55 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 5899999999999999999999 99 999999997
No 184
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.39 E-value=1.6e-08 Score=118.85 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=45.9
Q ss_pred HHcCCEEEeCceEEEEEEcCC--e-EEEEEee-CCCCccceeEEEeccEEEEeeccccCCCCCCccccCee
Q psy9583 622 NKQGLNIILNTKIHDIKINKE--N-VLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNNLNIDKIGLK 688 (866)
Q Consensus 622 ~~~GV~i~~~~~v~~i~~~~~--~-~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~ 688 (866)
++.|+++++++.|+++..+++ . .-+.+.+ .+|+ ..++.+|.||+|+|..|+..+|.+...|..
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~----~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~ 337 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGD----RFEIKADVYVLTAGAVHNTQLLVNSGFGQL 337 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCC----EEEECEEEEEECSCTTHHHHHHHTTTSSCC
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCc----EEEEECCEEEEcCCCcCCHHHHHhcCCCcc
Confidence 345899999999999987643 2 3355553 2343 457899999999999999988655555554
No 185
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.39 E-value=1.3e-06 Score=96.12 Aligned_cols=34 Identities=26% Similarity=0.477 Sum_probs=32.2
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+|||||++|+++|++|++.|++|+|||+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3899999999999999999999999999999973
No 186
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.38 E-value=1.7e-06 Score=100.99 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||+|++|+++|..|++.|++|+|+|+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~ 158 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKE 158 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence 589999999999999999999999999999998
No 187
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.38 E-value=3.5e-07 Score=103.75 Aligned_cols=37 Identities=30% Similarity=0.510 Sum_probs=33.8
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
|+.++||+|||||+||+++|..|++.|++|+|||+.+
T Consensus 3 m~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 3 KELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4446999999999999999999999999999999973
No 188
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.38 E-value=1.4e-06 Score=101.29 Aligned_cols=35 Identities=26% Similarity=0.466 Sum_probs=31.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
++||+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 48999999999999999999999999999999743
No 189
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.37 E-value=8.1e-07 Score=98.93 Aligned_cols=34 Identities=24% Similarity=0.534 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999999999999999999999999999973
No 190
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.37 E-value=1.3e-06 Score=102.15 Aligned_cols=33 Identities=36% Similarity=0.711 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHC------CCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL------GFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~------g~~V~liek~ 422 (866)
.+||+|||||+||+++|..|++. |.+|+||||.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~ 73 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 73 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence 48999999999999999999999 9999999998
No 191
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.37 E-value=1.2e-06 Score=104.78 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||||++|+++|+.|++.|++|+|||+.
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 296 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCAD 296 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCC
Confidence 589999999999999999999999999999996
No 192
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.36 E-value=7.6e-07 Score=96.95 Aligned_cols=39 Identities=26% Similarity=0.290 Sum_probs=35.0
Q ss_pred cceeeecCCccHHHHHHHHHH---CCCeEEEEeccCCCcccccCCCcc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQ---LGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~---~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
+||+|||||++|+++|..|++ .|++|+||||. ...||.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~------~~~gg~~ 43 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKA------DDSGGRM 43 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSS------SSSCGGG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECC------CCCccce
Confidence 689999999999999999999 89999999997 4566654
No 193
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.35 E-value=2.4e-07 Score=96.69 Aligned_cols=40 Identities=25% Similarity=0.404 Sum_probs=37.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+||+|||||||||+||..|++.|++|+||||. +.+||.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~------~~~GG~~~ 42 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS------RGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC------CCCCCccc
Confidence 89999999999999999999999999999998 67788764
No 194
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.35 E-value=1.4e-06 Score=101.53 Aligned_cols=33 Identities=33% Similarity=0.579 Sum_probs=32.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||||+||+++|..|++.|++|+|||+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCC
Confidence 699999999999999999999999999999997
No 195
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.34 E-value=2.9e-06 Score=95.18 Aligned_cols=41 Identities=34% Similarity=0.578 Sum_probs=37.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
+||+|||||++|++||++|++.|++|+|+|++ +.+||.|..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~------~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKS------AMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSS------SSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCC------CCCCceeEE
Confidence 48999999999999999999999999999998 677887754
No 196
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.33 E-value=5.1e-07 Score=100.88 Aligned_cols=35 Identities=37% Similarity=0.563 Sum_probs=32.5
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46999999999999999999999999999999973
No 197
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.33 E-value=1.7e-06 Score=95.35 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.++||+|||||++|+++|++|+ .|++|+|+|+.
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~ 40 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLERE 40 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECC
Confidence 3589999999999999999999 59999999997
No 198
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.31 E-value=1e-06 Score=97.93 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=32.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3899999999999999999999999999999973
No 199
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.30 E-value=1.1e-06 Score=98.26 Aligned_cols=33 Identities=39% Similarity=0.571 Sum_probs=31.7
Q ss_pred ccceeeecCCccHHHHHHHHHHC--CCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~ 422 (866)
++||+|||||++|+++|+.|++. |++|+|||+.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 48999999999999999999999 9999999996
No 200
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.29 E-value=4.3e-06 Score=97.80 Aligned_cols=35 Identities=40% Similarity=0.783 Sum_probs=32.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
..+||||||||+||++||+.|++.|.+|+||||..
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 35899999999999999999999999999999973
No 201
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.29 E-value=1.7e-06 Score=96.34 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=33.2
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKD 424 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~ 424 (866)
..+||+|||||++|+++|..|++.|.+|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 358999999999999999999999999999999743
No 202
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.29 E-value=2.8e-06 Score=95.35 Aligned_cols=41 Identities=34% Similarity=0.619 Sum_probs=36.6
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
+||+|||||++|++||++|++.|++|+|+|++ +.+||.+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~------~~~GG~~~~ 41 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERL------PITGGRFTN 41 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSS------SSSBTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCC------CCCCCceee
Confidence 58999999999999999999999999999998 567776643
No 203
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.28 E-value=3.1e-06 Score=98.15 Aligned_cols=35 Identities=31% Similarity=0.610 Sum_probs=32.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.++||+|||||++|+++|..|++.|.+|+|||+.+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 35899999999999999999999999999999974
No 204
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.26 E-value=3.3e-06 Score=94.41 Aligned_cols=35 Identities=26% Similarity=0.534 Sum_probs=32.4
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCe-EEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFK-TACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~-V~liek~~ 423 (866)
..+||+|||||++|+++|..|++.|.+ |+|||+.+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 358999999999999999999999999 99999973
No 205
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.26 E-value=3.1e-06 Score=96.97 Aligned_cols=37 Identities=27% Similarity=0.471 Sum_probs=33.9
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
+.+++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3446999999999999999999999999999999974
No 206
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.25 E-value=2.3e-06 Score=99.91 Aligned_cols=34 Identities=35% Similarity=0.564 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||||||||+||++||+.|++.|.+|+||||.+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 5899999999999999999999999999999973
No 207
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.24 E-value=8.2e-06 Score=88.85 Aligned_cols=95 Identities=18% Similarity=0.224 Sum_probs=78.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---------------------Ccc-----------cHHHHHHHH
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---------------------NTV-----------DEEIAKKAF 618 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---------------------~~~-----------d~~~~~~l~ 618 (866)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 379999999999999999999999999999886531 111 167888888
Q ss_pred HHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 619 HLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 619 ~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
+.+++.|++++++++|+++..+++.+. +... ++ ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~--~g-------~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARD--GR-------QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETT--SC-------EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeC--CC-------EEEeCEEEECCCCC
Confidence 999999999999999999998877765 5432 33 78999999999953
No 208
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.22 E-value=6.6e-06 Score=88.26 Aligned_cols=100 Identities=11% Similarity=0.144 Sum_probs=79.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecC--CcC--------CCc----ccHHHHHHHHHHHHHcCCEEEeCceEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS--SNF--------LNT----VDEEIAKKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~--~~~--------l~~----~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+ .+. ...++.+.+.+.+++.|++++. ..+.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999986 111 011 2367788888889999999999 99999
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+..+++.+.+... ++. .+.+|.+++|+|..|....
T Consensus 95 i~~~~~~~~v~~~--~g~------~~~~d~lvlAtG~~~~~~~ 129 (323)
T 3f8d_A 95 IENRGDEFVVKTK--RKG------EFKADSVILGIGVKRRKLG 129 (323)
T ss_dssp EEEC--CEEEEES--SSC------EEEEEEEEECCCCEECCCC
T ss_pred EEecCCEEEEEEC--CCC------EEEcCEEEECcCCCCccCC
Confidence 9887766666554 554 8999999999999887653
No 209
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.21 E-value=1.8e-06 Score=96.08 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 5899999999999999999999999999999973
No 210
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.20 E-value=5.2e-06 Score=95.08 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=32.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5899999999999999999999999999999974
No 211
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.18 E-value=4.8e-06 Score=88.68 Aligned_cols=41 Identities=34% Similarity=0.489 Sum_probs=35.6
Q ss_pred cccceeeecCCccHHHHHHHHHHC--CCeEEEEeccCCCcccccCCCcc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~~~~~~~~~GG~~ 435 (866)
..+||+|||||++|++||..|++. |++|+|+|+. ..+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~------~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS------VAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS------SSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecC------ccccccc
Confidence 357999999999999999999998 9999999997 5566444
No 212
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.18 E-value=4.5e-06 Score=96.83 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=32.2
Q ss_pred cccceeeecCCccHHHHHHHHHH---CCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQ---LGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~---~g~~V~liek~ 422 (866)
+.+||+|||||++|+++|..|++ .|.+|+|||+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 40 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESA 40 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 35899999999999999999999 99999999996
No 213
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.17 E-value=5.3e-06 Score=96.43 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=32.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..+||+|||||++|+++|..|+++|++|+|+|++
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~ 50 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMN 50 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4699999999999999999999999999999997
No 214
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.17 E-value=1.1e-05 Score=91.32 Aligned_cols=33 Identities=30% Similarity=0.385 Sum_probs=31.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCC-CeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~ 422 (866)
++||+|||||++|+++|++|++.| .+|+|||+.
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 599999999999999999999999 999999993
No 215
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.16 E-value=7e-06 Score=88.50 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=81.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---------------Cc----ccHHHHHHHHHHHHHcCCEEEeC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---------------NT----VDEEIAKKAFHLLNKQGLNIILN 631 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---------------~~----~d~~~~~~l~~~l~~~GV~i~~~ 631 (866)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999987432 11 13677888888888899999999
Q ss_pred ceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeecc---ccCCCC
Q psy9583 632 TKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGR---IPNTNN 679 (866)
Q Consensus 632 ~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~---~p~~~~ 679 (866)
+.|+++...++ .+.+.+. ++ ++.+|.+|+|+|. .|....
T Consensus 88 ~~v~~i~~~~~~~~~v~~~--~g-------~~~~d~vVlAtG~~~~~p~~~~ 130 (332)
T 3lzw_A 88 QAVESVEKQADGVFKLVTN--EE-------THYSKTVIITAGNGAFKPRKLE 130 (332)
T ss_dssp CCEEEEEECTTSCEEEEES--SE-------EEEEEEEEECCTTSCCEECCCC
T ss_pred CEEEEEEECCCCcEEEEEC--CC-------EEEeCEEEECCCCCcCCCCCCC
Confidence 99999988765 5566553 33 4899999999999 776543
No 216
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.13 E-value=8.1e-06 Score=99.74 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=31.9
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCC-eEEEEecc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGF-KTACIDEW 422 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~-~V~liek~ 422 (866)
..++||+|||||++|+++|++|++.|. +|+|||+.
T Consensus 2 ~~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~ 37 (830)
T 1pj5_A 2 ASTPRIVIIGAGIVGTNLADELVTRGWNNITVLDQG 37 (830)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCC
Confidence 346999999999999999999999998 99999997
No 217
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.13 E-value=8.7e-06 Score=88.00 Aligned_cols=103 Identities=16% Similarity=0.185 Sum_probs=82.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC----cC------------CCc-----ccHHHHHHHHHHHHHcCCEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS----NF------------LNT-----VDEEIAKKAFHLLNKQGLNI 628 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~----~~------------l~~-----~d~~~~~~l~~~l~~~GV~i 628 (866)
.++|+|||||+.|+.+|..|++.|.+|+++++.+ .+ .+. ...++...+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 4789999999999999999999999999999954 11 111 24578888999999999999
Q ss_pred EeCceEEEEEEcCCeEEEEEee-CCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 629 ILNTKIHDIKINKENVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 629 ~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+.++ +.++..+++.+.+.... .++. .+.+|.+|+|+|.+|....
T Consensus 102 ~~~~-v~~i~~~~~~~~v~~~~~~~~~------~~~~d~vvlAtG~~~~~~~ 146 (338)
T 3itj_A 102 ITET-VSKVDLSSKPFKLWTEFNEDAE------PVTTDAIILATGASAKRMH 146 (338)
T ss_dssp ECSC-EEEEECSSSSEEEEETTCSSSC------CEEEEEEEECCCEEECCCC
T ss_pred EEeE-EEEEEEcCCEEEEEEEecCCCc------EEEeCEEEECcCCCcCCCC
Confidence 9988 99998877777666532 1333 7899999999999887654
No 218
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.12 E-value=1.4e-06 Score=79.05 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=53.2
Q ss_pred EecCCCCCCCCeEEEEEEEe-CCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC---EEe---cCC-EEEEE
Q psy9583 6 VKIPKLSESISEATLLNWHK-KEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS---IVT---SNQ-VIALI 77 (866)
Q Consensus 6 ~~~p~~g~~~~~g~i~~w~~-~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~---~v~---~g~-~l~~~ 77 (866)
+.+|.+|+ |+...+ ++||.|++||++++||++|+..+|.||.+|+|.+++.+.++ .|. -|+ -|+.+
T Consensus 30 ~a~~~lG~------i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i 103 (131)
T 1hpc_A 30 HAQDHLGE------VVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKI 103 (131)
T ss_dssp HHHHHHCS------EEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCEEE
T ss_pred hhcccCCC------ceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEEEE
Confidence 34555555 444444 99999999999999999999999999999999999865544 453 454 67777
Q ss_pred ecC
Q psy9583 78 DTD 80 (866)
Q Consensus 78 ~~~ 80 (866)
...
T Consensus 104 ~~~ 106 (131)
T 1hpc_A 104 KPT 106 (131)
T ss_dssp EES
T ss_pred EEC
Confidence 643
No 219
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.11 E-value=1.8e-05 Score=85.60 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=78.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---------------Cc----ccHHHHHHHHHHHHHcCCEEEeC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---------------NT----VDEEIAKKAFHLLNKQGLNIILN 631 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---------------~~----~d~~~~~~l~~~l~~~GV~i~~~ 631 (866)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.+++++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999876541 11 12567777888888889999999
Q ss_pred ceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 632 TKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 632 ~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
+.|+++..+++.+.+.+ .++. ++.+|.+|+|+|..
T Consensus 86 ~~v~~i~~~~~~~~v~~--~~g~------~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGDLFKVTT--SQGN------AYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETTEEEEEE--TTSC------EEEEEEEEECCTTS
T ss_pred CEEEEEEECCCEEEEEE--CCCC------EEEeCEEEECCCCC
Confidence 99999988766555554 3554 78999999999983
No 220
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.10 E-value=3.3e-06 Score=76.42 Aligned_cols=70 Identities=19% Similarity=0.128 Sum_probs=52.9
Q ss_pred EecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC---EEe---cCC-EEEEEe
Q psy9583 6 VKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS---IVT---SNQ-VIALID 78 (866)
Q Consensus 6 ~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~---~v~---~g~-~l~~~~ 78 (866)
+.+|.+|+ +...++ .++|++|++||++|+||++|+..+|.||.+|+|.+++.+.++ .+. -|+ -|+.+.
T Consensus 31 ~a~~~lG~-i~~v~l----p~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl~~i~ 105 (128)
T 3a7l_A 31 HAQELLGD-MVFVDL----PEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIK 105 (128)
T ss_dssp HHHHHHCS-EEEEEC----CCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCCEEEE
T ss_pred HHhccCCc-eEEEEe----cCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccEEEEE
Confidence 34555655 333333 499999999999999999999999999999999999865544 344 455 677776
Q ss_pred cC
Q psy9583 79 TD 80 (866)
Q Consensus 79 ~~ 80 (866)
..
T Consensus 106 ~~ 107 (128)
T 3a7l_A 106 AS 107 (128)
T ss_dssp ES
T ss_pred EC
Confidence 43
No 221
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.10 E-value=5.4e-06 Score=95.27 Aligned_cols=113 Identities=17% Similarity=0.274 Sum_probs=85.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC------------------------------------C------C
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF------------------------------------L------N 607 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~------------------------------------l------~ 607 (866)
..+|+|||||+.|+.+|..|++.|.+|+++++++.+ + +
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987532 0 0
Q ss_pred cc------------------------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCcc
Q psy9583 608 TV------------------------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVK 656 (866)
Q Consensus 608 ~~------------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~ 656 (866)
.+ ...+.+.+.+.+++.|++++++++|+++..+++.+. +.+. +|.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~--~G~-- 262 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS--NGE-- 262 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEET--TSC--
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEEC--CCC--
Confidence 00 145666777888889999999999999988776544 5443 665
Q ss_pred ceeEEEeccEEEEeeccccCCCCCCccccCeeec
Q psy9583 657 TEIITSIFDKLLIAIGRIPNTNNLNIDKIGLKVN 690 (866)
Q Consensus 657 ~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~ 690 (866)
++.+|.||+|+|..+...+..+...|+.+.
T Consensus 263 ----~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 263 ----EIKSRHVVLAVGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp ----EEECSCEEECCCTTCHHHHHHHHHTTCCCE
T ss_pred ----EEECCEEEECCCCChhhHHHHHHHcCCCcc
Confidence 799999999999987532211344455543
No 222
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.09 E-value=1.8e-05 Score=83.78 Aligned_cols=100 Identities=14% Similarity=0.194 Sum_probs=78.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---------Cc----ccHHHHHHHHHHHHHc-CCEEEeCceEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---------NT----VDEEIAKKAFHLLNKQ-GLNIILNTKIHD 636 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---------~~----~d~~~~~~l~~~l~~~-GV~i~~~~~v~~ 636 (866)
.+|+|||||+.|+.+|..|++.|.+|+++++.+... +. ...++...+.+.+++. ++.++. .+++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEE
Confidence 479999999999999999999999999999743211 11 1356777788888876 788875 58999
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+..+++.+.+.+. ++. ++.+|.+|+|+|..|....
T Consensus 82 i~~~~~~~~v~~~--~g~------~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 82 AKGSFGEFIVEID--GGR------RETAGRLILAMGVTDELPE 116 (297)
T ss_dssp EEEETTEEEEEET--TSC------EEEEEEEEECCCCEEECCC
T ss_pred EEEcCCeEEEEEC--CCC------EEEcCEEEECCCCCCCCCC
Confidence 9888777766664 555 7999999999999887643
No 223
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.08 E-value=1.3e-05 Score=89.28 Aligned_cols=98 Identities=18% Similarity=0.256 Sum_probs=79.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-----------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT----------------------------------------- 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 608 (866)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+...
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 458999999999999999999999999999987753100
Q ss_pred -----------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEecc
Q psy9583 609 -----------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFD 665 (866)
Q Consensus 609 -----------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D 665 (866)
...++.+.+.+.+++.|++++++++|+++..+++++.+... +| ++.+|
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~--~g-------~i~ad 177 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTS--AG-------TVDAA 177 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEET--TE-------EEEES
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEEC--Cc-------EEEee
Confidence 01256677788888899999999999999988777666543 33 68999
Q ss_pred EEEEeeccccC
Q psy9583 666 KLLIAIGRIPN 676 (866)
Q Consensus 666 ~vi~a~G~~p~ 676 (866)
.||+|+|..+.
T Consensus 178 ~VIlAtG~~S~ 188 (417)
T 3v76_A 178 SLVVASGGKSI 188 (417)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999998763
No 224
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.08 E-value=4.1e-06 Score=93.31 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=31.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++|+||||||+|+++|..|++.|++|+||||.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 579999999999999999999999999999974
No 225
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.06 E-value=2.8e-05 Score=82.96 Aligned_cols=99 Identities=19% Similarity=0.213 Sum_probs=78.8
Q ss_pred eEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCc-----------CCCc-----ccHHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSN-----------FLNT-----VDEEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~-----------~l~~-----~d~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
+++|||+|+.|+.+|..|++.|. +|+++++... ..+. ...++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999998531 0111 1256777888888889999998 789
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.++..+++.+.+.+. ++. ++.+|.+|+|+|..|....
T Consensus 82 ~~i~~~~~~~~v~~~--~g~------~~~~~~vv~AtG~~~~~~~ 118 (311)
T 2q0l_A 82 QRVSKKDSHFVILAE--DGK------TFEAKSVIIATGGSPKRTG 118 (311)
T ss_dssp EEEEEETTEEEEEET--TSC------EEEEEEEEECCCEEECCCC
T ss_pred EEEEEcCCEEEEEEc--CCC------EEECCEEEECCCCCCCCCC
Confidence 999887776666553 555 7999999999999886544
No 226
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.06 E-value=1.6e-05 Score=91.31 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=32.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~ 35 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQ 35 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECC
Confidence 589999999999999999999999999999997
No 227
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.03 E-value=2.4e-05 Score=85.58 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=79.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---------------Cc----ccHHHHHHHHHHHHHcCCEEEe
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---------------NT----VDEEIAKKAFHLLNKQGLNIIL 630 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---------------~~----~d~~~~~~l~~~l~~~GV~i~~ 630 (866)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 3589999999999999999999999999999876531 11 1267778888888889999999
Q ss_pred CceEEEEEEcCC-eEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 631 NTKIHDIKINKE-NVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 631 ~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
++.|+.+..+++ .+.+.+. +|. .+.+|.+|+|+|..+
T Consensus 94 ~~~v~~i~~~~~~~~~v~~~--~g~------~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 94 NETVTKYTKLDDGTFETRTN--TGN------VYRSRAVLIAAGLGA 131 (360)
T ss_dssp SCCEEEEEECTTSCEEEEET--TSC------EEEEEEEEECCTTCS
T ss_pred CCEEEEEEECCCceEEEEEC--CCc------EEEeeEEEEccCCCc
Confidence 999999988654 5555553 555 799999999999843
No 228
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.03 E-value=5.1e-06 Score=75.16 Aligned_cols=70 Identities=19% Similarity=0.246 Sum_probs=54.0
Q ss_pred EecCCCCCCCCeEEEEEEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeec---CCCEE---ecCC-EEEEEe
Q psy9583 6 VKIPKLSESISEATLLNWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIIT---DGSIV---TSNQ-VIALID 78 (866)
Q Consensus 6 ~~~p~~g~~~~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~---~g~~v---~~g~-~l~~~~ 78 (866)
+..|.+|+ +...++ .++|++|++||++|+||++|+..+|.||.+|+|.+++.+ ..+.+ +-|+ -|+.+.
T Consensus 30 ~a~~~lG~-i~~v~l----p~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~ 104 (128)
T 1onl_A 30 YAQDALGD-VVYVEL----PEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLK 104 (128)
T ss_dssp HHHHHHCS-EEEEEC----BCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCEEEE
T ss_pred HHhhcCCC-ceEEEe----cCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccEEEEE
Confidence 34555655 333333 599999999999999999999999999999999999754 44445 5666 777777
Q ss_pred cC
Q psy9583 79 TD 80 (866)
Q Consensus 79 ~~ 80 (866)
..
T Consensus 105 ~~ 106 (128)
T 1onl_A 105 PR 106 (128)
T ss_dssp ES
T ss_pred EC
Confidence 54
No 229
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.01 E-value=4.2e-05 Score=86.75 Aligned_cols=105 Identities=19% Similarity=0.361 Sum_probs=80.9
Q ss_pred CeEEEECCcHHHHHHHHHHHh---cCCc---EEEEecCCcCCC-------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRR---LGSE---VTILEMSSNFLN------------------------------------- 607 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~---~g~~---Vtli~~~~~~l~------------------------------------- 607 (866)
++|+|||||+.|+.+|..|.+ .|.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 999998764310
Q ss_pred cc---------------cHHHHHHHHHHHHHcCCE--EEeCceEEEEEEcCC--eEEEEEeeC-CCCccceeEEEeccEE
Q psy9583 608 TV---------------DEEIAKKAFHLLNKQGLN--IILNTKIHDIKINKE--NVLINYSNK-STNVKTEIITSIFDKL 667 (866)
Q Consensus 608 ~~---------------d~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~--~~~v~~~~~-~g~~~~~~~~~~~D~v 667 (866)
.+ ..++.+.+.+.+++.|++ +++++.|+++...++ .+.+++.+. +|. ..++.+|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~----~~~~~~d~V 158 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDT----IYSEEFDYV 158 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTE----EEEEEESEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCc----eEEEEcCEE
Confidence 00 145667777778888998 999999999987665 667776532 231 247899999
Q ss_pred EEeec--cccCCCC
Q psy9583 668 LIAIG--RIPNTNN 679 (866)
Q Consensus 668 i~a~G--~~p~~~~ 679 (866)
|+|+| ..|+...
T Consensus 159 VvAtG~~s~p~~p~ 172 (464)
T 2xve_A 159 VCCTGHFSTPYVPE 172 (464)
T ss_dssp EECCCSSSSBCCCC
T ss_pred EECCCCCCCCccCC
Confidence 99999 6776543
No 230
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.99 E-value=2e-05 Score=94.52 Aligned_cols=33 Identities=39% Similarity=0.685 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~ 368 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAK 368 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 489999999999999999999999999999997
No 231
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.98 E-value=2.3e-05 Score=91.06 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=32.6
Q ss_pred cccceeeecCCccHHHHHHHHHH---CCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQ---LGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~---~g~~V~liek~~ 423 (866)
..+||+|||||+||+++|..|++ .|.+|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 46899999999999999999999 999999999963
No 232
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.96 E-value=3.7e-05 Score=82.03 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=77.0
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCC--cC---------C--C-cccHHHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS--NF---------L--N-TVDEEIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~--~~---------l--~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
+|+|||+|+.|+.+|..|++.|.+|+++++.. .+ . + ...+++...+.+.+++.|++++.+++++.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999996531 11 0 0 113577788888889999999999999999
Q ss_pred EEcC---CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCC
Q psy9583 638 KINK---ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 638 ~~~~---~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
..+. +.+.+.+. +|. ++.+|.+|+|+|..|...
T Consensus 83 ~~~~~~~~~~~v~~~--~g~------~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 83 IPAAVEGGLHQIETA--SGA------VLKARSIIVATGAKWRNM 118 (310)
T ss_dssp ECCSSTTCCEEEEET--TSC------EEEEEEEEECCCEEECCC
T ss_pred EecccCCceEEEEEC--CCC------EEEeCEEEECcCCCcCCC
Confidence 7542 24555553 554 789999999999987654
No 233
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.95 E-value=3.4e-05 Score=89.09 Aligned_cols=35 Identities=20% Similarity=0.382 Sum_probs=32.4
Q ss_pred cccceeeecCCccHHHHHHHHHH------------CCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQ------------LGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~------------~g~~V~liek~~ 423 (866)
..+||+|||||+||+++|..|++ .|.+|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 35899999999999999999999 899999999863
No 234
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.95 E-value=4.2e-05 Score=88.73 Aligned_cols=34 Identities=24% Similarity=0.479 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++.|.+|+||||.+
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5899999999999999999999999999999974
No 235
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.94 E-value=2.2e-05 Score=92.75 Aligned_cols=34 Identities=26% Similarity=0.441 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHH---H-CCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLA---Q-LGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~---~-~g~~V~liek~~ 423 (866)
.+||||||||+||++||+.|+ + .|.+|+||||..
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 589999999999999999999 6 899999999974
No 236
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.94 E-value=6.1e-05 Score=80.97 Aligned_cols=100 Identities=17% Similarity=0.208 Sum_probs=77.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-----------CCCcc-----cHHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-----------FLNTV-----DEEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-----------~l~~~-----d~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++.|++++. ..+
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 5799999999999999999999999999998721 01111 356777888888999999997 688
Q ss_pred EEEEEc--CCe-EEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKIN--KEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~--~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.++..+ ++. +.+... +|. ++.+|.+|+|+|..|....
T Consensus 88 ~~i~~~~~~~~~~~v~~~--~g~------~~~~~~vv~AtG~~~~~~~ 127 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRG--YNG------EYRAKAVILATGADPRKLG 127 (325)
T ss_dssp EEEEECTTSSSCCEEEEE--SSC------EEEEEEEEECCCEEECCCC
T ss_pred EEEEeccCCCceEEEEEC--CCC------EEEeCEEEECcCCCcCCCC
Confidence 888876 433 445443 554 7999999999999886543
No 237
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.93 E-value=5.9e-05 Score=82.63 Aligned_cols=98 Identities=27% Similarity=0.344 Sum_probs=76.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCC------c------CC-C-------c---------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSS------N------FL-N-------T--------------------- 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~------~------~l-~-------~--------------------- 608 (866)
.+|+|||||+.|+.+|..|++.|. +|+++++.+ . ++ + .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 0 00 0 0
Q ss_pred -ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 609 -VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 609 -~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
...++...+.+.+++.|++++.++.|+++..+++.+.+... ++ ++.+|.||+|+|..+..
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~--~g-------~~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATT--TE-------TYHADYIFVATGDYNFP 145 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEES--SC-------CEEEEEEEECCCSTTSB
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeC--CC-------EEEeCEEEECCCCCCcc
Confidence 01345666777788899999999999999887666666543 33 47899999999987653
No 238
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.93 E-value=2.7e-05 Score=89.66 Aligned_cols=32 Identities=16% Similarity=0.373 Sum_probs=30.4
Q ss_pred cceeeecCCccHHHHHHHHHH---CCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQ---LGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~---~g~~V~liek~ 422 (866)
+||+|||||++|+++|..|++ .|.+|+|||+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~ 37 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESG 37 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecC
Confidence 899999999999999999999 99999999996
No 239
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.92 E-value=4.2e-05 Score=86.36 Aligned_cols=106 Identities=24% Similarity=0.265 Sum_probs=79.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcCCC-----c----------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNFLN-----T---------------------------------- 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~l~-----~---------------------------------- 608 (866)
..+|+|||||+.|+.+|..|++.|. +|+++++.+.+.. .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999999 9999998753310 0
Q ss_pred ---------------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeC-CCCccceeE
Q psy9583 609 ---------------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNK-STNVKTEII 660 (866)
Q Consensus 609 ---------------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~-~g~~~~~~~ 660 (866)
...++.+.+.+..++.+..++++++|++++..++.+.+++.+. +|.. ..
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~---~~ 162 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSP---IS 162 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCC---EE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCe---eE
Confidence 0124556666666666788999999999998877777777641 1210 13
Q ss_pred EEeccEEEEeecc--ccCCC
Q psy9583 661 TSIFDKLLIAIGR--IPNTN 678 (866)
Q Consensus 661 ~~~~D~vi~a~G~--~p~~~ 678 (866)
++.+|.||+|+|. .|+..
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp EEEESEEEECCCSSSSBCBC
T ss_pred EEEeCEEEECCCCCCCCCCC
Confidence 6899999999998 66654
No 240
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.92 E-value=1.8e-05 Score=91.03 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=70.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+..|..+++.|.+|+|+++. ..+.+ .
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~------~~L~~------------------------------------~ 261 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRS------IVLRG------------------------------------F 261 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESS------CSSTT------------------------------------S
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccc------ccccc------------------------------------c
Confidence 67999999999999999999999999999875 11110 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEEeccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIFTGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
+.+. ...+...+++.|++++.+..+.. .......+.+...++..+.+|.|++|+|-+|+.
T Consensus 262 D~ei--------------~~~l~~~l~~~gi~~~~~~~v~~--~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 262 DQQC--------------AVKVKLYMEEQGVMFKNGILPKK--LTKMDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp CHHH--------------HHHHHHHHHHTTCEEEETCCEEE--EEEETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred chhH--------------HHHHHHHHHhhcceeecceEEEE--EEecCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 0011 11234467888999998876552 112335666666667788999999999998873
No 241
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.91 E-value=3.4e-05 Score=87.31 Aligned_cols=98 Identities=17% Similarity=0.268 Sum_probs=68.8
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||++|+.+|..|++.|.+|+++|+.+ .+. |. .
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~------~~l---------~~---------------------~----- 206 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD------RIL---------PT---------------------M----- 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSC---------TT---------------------S-----
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC------ccc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 210 10 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.+..+. ++. ..+.+.+...++.++.+|.||+|+|.+|..
T Consensus 207 ~~~--------------~~~~l~~~l~~~Gv~i~~~~~V~~i~~---~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 207 DLE--------------VSRAAERVFKKQGLTIRTGVRVTAVVP---EAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp CHH--------------HHHHHHHHHHHHTCEEECSCCEEEEEE---ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred CHH--------------HHHHHHHHHHHCCCEEEECCEEEEEEE---eCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 000 01112344666799999886655 322 223466655567789999999999998874
No 242
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.90 E-value=4.6e-05 Score=81.29 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=77.1
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEE-EecCCcC------------CCcc-----cHHHHHHHHHHHHHcCCEEEeC
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTI-LEMSSNF------------LNTV-----DEEIAKKAFHLLNKQGLNIILN 631 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtl-i~~~~~~------------l~~~-----d~~~~~~l~~~l~~~GV~i~~~ 631 (866)
..+|+|||||+.|+.+|..|++.|.+|++ +++. .+ .+.+ ..++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 35899999999999999999999999999 8873 21 1222 2678888889999999999988
Q ss_pred ceEEEEEEcC--CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 632 TKIHDIKINK--ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 632 ~~v~~i~~~~--~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+.++ .++ +.+.+.+. .+ . ++.+|.+++|+|.+|+...
T Consensus 83 -~v~~i-~~~~~~~~~v~~~--~~-----~-~~~~d~lvlAtG~~~~~~~ 122 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSFTIKLE--GG-----K-TELAKAVIVCTGSAPKKAG 122 (315)
T ss_dssp -CEEEE-EECTTSCEEEEET--TS-----C-EEEEEEEEECCCEEECCCC
T ss_pred -EEEEE-ecCCCCcEEEEEe--cC-----C-EEEeCEEEEeeCCCCCCCC
Confidence 88888 555 55554343 22 1 6889999999999887654
No 243
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.90 E-value=5.7e-05 Score=83.22 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=77.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-----------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT----------------------------------------- 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 608 (866)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.....
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred ---c-----------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 609 ---V-----------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 609 ---~-----------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
+ ...+...+.+.+.+.|++++++++|++++. + + .+++. +|. ++.+|.||.|+|..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~--~g~------~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQ--TGE------VLEADLIVGADGVG 159 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEET--TSC------EEECSEEEECCCTT
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEEC--CCC------EEEcCEEEECCCcc
Confidence 0 044567777888889999999999999987 3 3 55553 565 79999999999987
Q ss_pred cCC
Q psy9583 675 PNT 677 (866)
Q Consensus 675 p~~ 677 (866)
+..
T Consensus 160 s~v 162 (379)
T 3alj_A 160 SKV 162 (379)
T ss_dssp CHH
T ss_pred HHH
Confidence 654
No 244
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.89 E-value=4.5e-05 Score=88.17 Aligned_cols=101 Identities=22% Similarity=0.298 Sum_probs=80.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---------------------c----------------ccHHH
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---------------------T----------------VDEEI 613 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---------------------~----------------~d~~~ 613 (866)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -.+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 5799999999999999999999999999999654320 0 12567
Q ss_pred HHHHHHHHHHcCC--EEEeCceEEEEEEcCC--eEEEEEeeCCCCccceeEEEeccEEEEeec--cccCCCC
Q psy9583 614 AKKAFHLLNKQGL--NIILNTKIHDIKINKE--NVLINYSNKSTNVKTEIITSIFDKLLIAIG--RIPNTNN 679 (866)
Q Consensus 614 ~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~--~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G--~~p~~~~ 679 (866)
.+.+.+.+++.|+ .++++++|+++..+++ .+.+.+. +|. ++.+|.||+|+| .+|....
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~--~G~------~i~ad~lV~AtG~~s~p~~p~ 165 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD--RGD------EVSARFLVVAAGPLSNANTPA 165 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEET--TCC------EEEEEEEEECCCSEEECCCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEEC--CCC------EEEeCEEEECcCCCCCCCCCC
Confidence 7888888889998 8999999999987665 5556553 665 799999999999 5666543
No 245
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.89 E-value=3.2e-05 Score=87.80 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=67.5
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+|+|+.+ .+... .
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------~~l~~------------------------------~----- 208 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP------EILPQ------------------------------G----- 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSSTT------------------------------S-----
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC------ccccc------------------------------c-----
Confidence 679999999999999999999999999999862 21100 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcC-C--ce--EEEecEEEEecCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINK-T--KE--TITAKYIIIATGSKA 544 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~-~--g~--~i~~d~lViATGs~p 544 (866)
..+ +...+...+++.||+++.+..+. +.. ....+.+... + |+ ++.+|.||+|+|..|
T Consensus 209 ~~~--------------~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 209 DPE--------------TAALLRRALEKEGIRVRTKTKAVGYEK---KKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp CHH--------------HHHHHHHHHHHTTCEEECSEEEEEEEE---ETTEEEEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred CHH--------------HHHHHHHHHHhcCCEEEcCCEEEEEEE---eCCEEEEEEeecCCCceeEEEcCEEEECCCccc
Confidence 000 01123445677899999987765 322 1233444332 3 54 899999999999988
Q ss_pred cC
Q psy9583 545 RS 546 (866)
Q Consensus 545 ~~ 546 (866)
..
T Consensus 272 ~~ 273 (464)
T 2eq6_A 272 RT 273 (464)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 246
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.89 E-value=9.6e-05 Score=82.57 Aligned_cols=101 Identities=20% Similarity=0.175 Sum_probs=79.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--------Cc----------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--------NT---------------------------------- 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--------~~---------------------------------- 608 (866)
.+|+|||||..|+-+|..|++.|.+|+++++.+... +.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 479999999999999999999999999999864110 00
Q ss_pred -----------------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEe
Q psy9583 609 -----------------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIA 670 (866)
Q Consensus 609 -----------------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a 670 (866)
+ ...+...+.+.+++.|++++.+++|+++..++++..+.+...+|. ..++.+|.||.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~----~~~~~a~~vV~A 161 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGN----KREIEARFIIDA 161 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSC----EEEEEEEEEEEC
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCC----EEEEEcCEEEEC
Confidence 0 124456667777778999999999999998877776667655664 346999999999
Q ss_pred ecccc
Q psy9583 671 IGRIP 675 (866)
Q Consensus 671 ~G~~p 675 (866)
+|..+
T Consensus 162 ~G~~s 166 (421)
T 3nix_A 162 SGYGR 166 (421)
T ss_dssp CGGGC
T ss_pred CCCch
Confidence 99875
No 247
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.88 E-value=1.1e-05 Score=90.15 Aligned_cols=102 Identities=15% Similarity=0.241 Sum_probs=76.3
Q ss_pred CeEEEECCcHHHHHHHHHHHh---cCCcEEEEecCCcCC--Cc---------ccHHHHHHHHHHHHHcCCEEEeCceEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRR---LGSEVTILEMSSNFL--NT---------VDEEIAKKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~---~g~~Vtli~~~~~~l--~~---------~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
++|+|||||+.|+.+|..|++ .|.+|+++++++.+. +. ...++...+.+.+++.|++++.+ ++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 899999999887542 10 12233445667777889999987 8988
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+..++.. +.+...++. ..++.+|.+|+|+|.+|+...
T Consensus 81 i~~~~~~--V~~~~g~~~----~~~~~~d~lViAtG~~~~~~~ 117 (409)
T 3h8l_A 81 IDAKSSM--VYYTKPDGS----MAEEEYDYVIVGIGAHLATEL 117 (409)
T ss_dssp EETTTTE--EEEECTTSC----EEEEECSEEEECCCCEECGGG
T ss_pred EeCCCCE--EEEccCCcc----cceeeCCEEEECCCCCcCccC
Confidence 8866554 444432222 346899999999999987653
No 248
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.88 E-value=5.9e-05 Score=87.75 Aligned_cols=34 Identities=29% Similarity=0.497 Sum_probs=32.5
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.++||+|||||++|+++|+.|+++|++|+|||+.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~ 64 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQ 64 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4699999999999999999999999999999997
No 249
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.88 E-value=5.7e-05 Score=83.83 Aligned_cols=98 Identities=24% Similarity=0.335 Sum_probs=76.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-----------------c-------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-----------------T------------------------- 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-----------------~------------------------- 608 (866)
.+|+|||||+.|+.+|..+++.|.+|+++++.+.+.. .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 3699999999999999999999999999998764310 0
Q ss_pred ----------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc----CCeEEEEEeeCCCCccceeEEE
Q psy9583 609 ----------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN----KENVLINYSNKSTNVKTEIITS 662 (866)
Q Consensus 609 ----------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~----~~~~~v~~~~~~g~~~~~~~~~ 662 (866)
...++.+.+.+.+++.|+++++++.++++..+ ++.+.+.. .++ ++
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~--~~g-------~i 155 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV--NST-------QW 155 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE--TTE-------EE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE--CCC-------EE
Confidence 12345567778888899999999999999876 45555443 232 68
Q ss_pred eccEEEEeeccccCC
Q psy9583 663 IFDKLLIAIGRIPNT 677 (866)
Q Consensus 663 ~~D~vi~a~G~~p~~ 677 (866)
.+|.||+|+|..+..
T Consensus 156 ~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 156 QCKNLIVATGGLSMP 170 (401)
T ss_dssp EESEEEECCCCSSCG
T ss_pred ECCEEEECCCCccCC
Confidence 999999999988753
No 250
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.88 E-value=4.1e-05 Score=82.63 Aligned_cols=99 Identities=16% Similarity=0.257 Sum_probs=77.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEec----CCcC------------CCc-----ccHHHHHHHHHHHHHcCCEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEM----SSNF------------LNT-----VDEEIAKKAFHLLNKQGLNII 629 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~----~~~~------------l~~-----~d~~~~~~l~~~l~~~GV~i~ 629 (866)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+. ...++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999998 2211 111 135677888888899999999
Q ss_pred eCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 630 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.++ +..+..+++.+.+.+ ++. ++.+|.+|+|+|..|....
T Consensus 89 ~~~-v~~i~~~~~~~~v~~---~~~------~~~~~~vv~A~G~~~~~~~ 128 (333)
T 1vdc_A 89 TET-VTKVDFSSKPFKLFT---DSK------AILADAVILAIGAVAKRLS 128 (333)
T ss_dssp CCC-CCEEECSSSSEEEEC---SSE------EEEEEEEEECCCEEECCCC
T ss_pred EeE-EEEEEEcCCEEEEEE---CCc------EEEcCEEEECCCCCcCCCC
Confidence 987 888887666655544 443 7899999999999876543
No 251
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.88 E-value=1.6e-05 Score=89.65 Aligned_cols=98 Identities=26% Similarity=0.396 Sum_probs=75.7
Q ss_pred CeEEEECCcHHHHHHHHHHHh---cCCcEEEEecCCcCC--Cc---------ccHHHHHHHHHHHHHcCCEEEeCceEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRR---LGSEVTILEMSSNFL--NT---------VDEEIAKKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~---~g~~Vtli~~~~~~l--~~---------~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. +. ...++...+.+.+++.||+++ ...++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~-~~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFI-AQSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEE-CSCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEE-EeEEEE
Confidence 689999999999999999999 799999999988652 11 123344445677888999998 468999
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+..++. .+.+. ++. ++.+|.+|+|+|.+|+...
T Consensus 84 id~~~~--~V~~~--~g~------~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQ--NITLA--DGN------TVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTT--EEEET--TSC------EEECSEEEECCCCEECGGG
T ss_pred EEcCCC--EEEEC--CCC------EEECCEEEECCCCCcCccc
Confidence 886654 33343 555 7999999999999987643
No 252
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.88 E-value=2.6e-05 Score=86.12 Aligned_cols=100 Identities=23% Similarity=0.333 Sum_probs=76.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC---CcccH---------HHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL---NTVDE---------EIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l---~~~d~---------~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
..+|+|||||+.|+.+|..|...+.+|+++++.+.+. +.+.. ++.....+.+++.|++++++++|+++
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~i 88 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSI 88 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEE
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEE
Confidence 3579999999999999999988889999999987642 12211 11122356678899999999999999
Q ss_pred EEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 638 ~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..++.. +++ .+|. ++.+|.+|+|||.+|....
T Consensus 89 d~~~~~--v~~--~~g~------~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 89 DPNNKL--VTL--KSGE------KIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp ETTTTE--EEE--TTSC------EEECSEEEECCCEEECCCC
T ss_pred ECCCCE--EEE--CCCC------EEECCEEEEecCCCcCCCC
Confidence 876653 334 3665 8999999999999987654
No 253
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.87 E-value=7.8e-05 Score=79.81 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=77.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-----------CCCc-----ccHHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-----------FLNT-----VDEEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-----------~l~~-----~d~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+. ..+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999986320 0111 235777888888999999999886 8
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+..+++.+.+ .. ++. .+.+|.+++|+|.+|....
T Consensus 85 ~~i~~~~~~~~v-~~--~~~------~~~~~~lv~AtG~~~~~~~ 120 (320)
T 1trb_A 85 NKVDLQNRPFRL-NG--DNG------EYTCDALIIATGASARYLG 120 (320)
T ss_dssp EEEECSSSSEEE-EE--SSC------EEEEEEEEECCCEEECCCC
T ss_pred eEEEecCCEEEE-Ee--CCC------EEEcCEEEECCCCCcCCCC
Confidence 888876666665 33 454 7899999999999886643
No 254
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.87 E-value=9.3e-05 Score=79.28 Aligned_cols=100 Identities=20% Similarity=0.157 Sum_probs=78.1
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-----------CCCc----ccHHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-----------FLNT----VDEEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-----------~l~~----~d~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
..+|+|||+|+.|+.+|..|++.|.+|+++++... ..+. ...++...+.+.+++.|++++. ..+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 35799999999999999999999999999998421 0111 1356777788888889999988 789
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+..+++.+.+.. ++. ++.+|.+|+|+|..|....
T Consensus 95 ~~i~~~~~~~~v~~---~~~------~~~~~~li~AtG~~~~~~~ 130 (319)
T 3cty_A 95 RSIKKTQGGFDIET---NDD------TYHAKYVIITTGTTHKHLG 130 (319)
T ss_dssp EEEEEETTEEEEEE---SSS------EEEEEEEEECCCEEECCCC
T ss_pred EEEEEeCCEEEEEE---CCC------EEEeCEEEECCCCCcccCC
Confidence 99887766665544 344 7899999999999876543
No 255
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.85 E-value=8.3e-05 Score=85.79 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=79.8
Q ss_pred CeEEEECCcHHHHHHHHHHH-hcCCcEEEEecCCcCCC--------c-----------------------------ccHH
Q psy9583 571 KKLCIIGAGVIGLEIGSIWR-RLGSEVTILEMSSNFLN--------T-----------------------------VDEE 612 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~-~~g~~Vtli~~~~~~l~--------~-----------------------------~d~~ 612 (866)
.+|+|||||+.|+.+|..|+ +.|.+|+++++.+.+.. . ..++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 99999999999764320 0 1346
Q ss_pred HHHHHHHHHHHcCC--EEEeCceEEEEEEcCC--eEEEEEeeCCCCccceeEEEeccEEEEeecc--ccCCC
Q psy9583 613 IAKKAFHLLNKQGL--NIILNTKIHDIKINKE--NVLINYSNKSTNVKTEIITSIFDKLLIAIGR--IPNTN 678 (866)
Q Consensus 613 ~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~--~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~--~p~~~ 678 (866)
+.+.+.+.+++.|+ .++++++|+++..+++ .+.+.+. +|. ++.+|.||+|+|. +|...
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~--~G~------~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTD--HGE------VYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEET--TSC------EEEEEEEEECCCSCCSBCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEc--CCC------EEEeCEEEECCcccccCCCC
Confidence 77788888888998 8999999999987765 5566554 665 7899999999994 55543
No 256
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.83 E-value=6e-05 Score=89.02 Aligned_cols=35 Identities=26% Similarity=0.589 Sum_probs=32.7
Q ss_pred cccceeeecCCccHHHHHHHHHH-CCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQ-LGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~-~g~~V~liek~~ 423 (866)
.++||+||||||+|+++|..|++ .|.+|+||||.+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 45899999999999999999999 999999999974
No 257
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.82 E-value=7.6e-06 Score=94.23 Aligned_cols=41 Identities=41% Similarity=0.517 Sum_probs=37.7
Q ss_pred ccceeeecCCccHHHHHHHHHH-CCCeEEEEeccCCCcccccCCCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-LGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
++||+|||||++||+||.+|++ .|++|+|+|++ +.+||.|.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~------~~~GG~~~ 51 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSN------ETPGGLAS 51 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESS------SSCCGGGC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECC------CCCcCCee
Confidence 4899999999999999999987 49999999998 78999874
No 258
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.81 E-value=2.9e-05 Score=87.90 Aligned_cols=102 Identities=18% Similarity=0.294 Sum_probs=76.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCC--C-cc----c------HHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFL--N-TV----D------EEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l--~-~~----d------~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
++|+|||||+.|+.+|..|++. |.+|+++++.+.+. + .+ . .++.....+.+++.|++++++++|+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999988653 1 11 0 1111113467788999999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
++..+...+.+... .+ ...+.+|.+++|+|.+|....
T Consensus 83 ~id~~~~~v~v~~~-~~------~~~~~~d~lviAtG~~p~~p~ 119 (452)
T 3oc4_A 83 AMDVENQLIAWTRK-EE------QQWYSYDKLILATGASQFSTQ 119 (452)
T ss_dssp EEETTTTEEEEEET-TE------EEEEECSEEEECCCCCBCCCC
T ss_pred EEECCCCEEEEEec-Cc------eEEEEcCEEEECCCcccCCCC
Confidence 99887776666521 12 348999999999999987653
No 259
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.81 E-value=6.4e-05 Score=83.46 Aligned_cols=98 Identities=13% Similarity=0.206 Sum_probs=77.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------------------------------- 607 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------- 607 (866)
.+|+|||||+.|+.+|..|++.|.+|+++++.+....
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998754300
Q ss_pred --cc---------------cHHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeE--EEEEeeCCCCccceeEEEeccEE
Q psy9583 608 --TV---------------DEEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENV--LINYSNKSTNVKTEIITSIFDKL 667 (866)
Q Consensus 608 --~~---------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~v~~~~~~g~~~~~~~~~~~D~v 667 (866)
.+ ...+.+.+.+.+++. |++++++++|++++.+++++ .+++. +|. ++.+|.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~--~g~------~~~ad~v 158 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLN--DGR------VLRPRVV 158 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEET--TSC------EEEEEEE
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEEC--CCC------EEECCEE
Confidence 00 124456666677776 99999999999999887776 66654 665 7899999
Q ss_pred EEeeccccC
Q psy9583 668 LIAIGRIPN 676 (866)
Q Consensus 668 i~a~G~~p~ 676 (866)
|.|.|..+.
T Consensus 159 V~AdG~~s~ 167 (399)
T 2x3n_A 159 VGADGIASY 167 (399)
T ss_dssp EECCCTTCH
T ss_pred EECCCCChH
Confidence 999998764
No 260
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.79 E-value=0.00014 Score=78.33 Aligned_cols=99 Identities=16% Similarity=0.243 Sum_probs=72.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--------------------CcccHHHHHHHHH-----------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--------------------NTVDEEIAKKAFH----------- 619 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--------------------~~~d~~~~~~l~~----------- 619 (866)
.+|+|||||++|+.+|..|++.|.+|+++++.+... ....+.+.+.+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 479999999999999999999999999999886431 1112333333222
Q ss_pred --------------------------------HHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEE
Q psy9583 620 --------------------------------LLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKL 667 (866)
Q Consensus 620 --------------------------------~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~v 667 (866)
.|. .|++++++++|++++.+++++.+++. +|. ....+|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~--~g~-----~~~~a~~v 154 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDA--EGQ-----NHGPFSHV 154 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEET--TSC-----EEEEESEE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeC--CCc-----CccccCEE
Confidence 222 27899999999999988888777653 564 23359999
Q ss_pred EEeeccccCC
Q psy9583 668 LIAIGRIPNT 677 (866)
Q Consensus 668 i~a~G~~p~~ 677 (866)
|+|+|.....
T Consensus 155 V~a~g~~~~~ 164 (336)
T 1yvv_A 155 IIATPAPQAS 164 (336)
T ss_dssp EECSCHHHHG
T ss_pred EEcCCHHHHH
Confidence 9999975433
No 261
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.77 E-value=1.3e-05 Score=88.97 Aligned_cols=46 Identities=24% Similarity=0.397 Sum_probs=41.4
Q ss_pred cccccceeeecCCccHHHHHHHHHHC-CCeEEEEeccCCCcccccCCCcccee
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWKDNEENFALGGTCTNV 438 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~~~~~~~~~GG~~~~~ 438 (866)
|+.++||+|||||++|++||..|++. |++|+|+|++ +.+||.|...
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~------~~~GG~~~~~ 50 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERR------PHIGGNAYSE 50 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSS------SSSSGGGCEE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCC------CCCCCeeeec
Confidence 55569999999999999999999999 9999999998 7899988654
No 262
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=2.9e-05 Score=88.02 Aligned_cols=96 Identities=19% Similarity=0.260 Sum_probs=67.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||++|+.+|..|++.|.+|+|+++.+ .+... .
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------~~l~~------~----------------------------- 210 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE------RILPT------Y----------------------------- 210 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS------SSSTT------S-----------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC------ccccc------c-----------------------------
Confidence 679999999999999999999999999999862 22100 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~ 546 (866)
..++ ...+...+++.||+++.+..+. ++. .. +.+...+| .++.+|.||+|+|.+|..
T Consensus 211 ~~~~--------------~~~l~~~l~~~gv~i~~~~~v~~i~~----~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 211 DSEL--------------TAPVAESLKKLGIALHLGHSVEGYEN----GC-LLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp CHHH--------------HHHHHHHHHHHTCEEETTCEEEEEET----TE-EEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred CHHH--------------HHHHHHHHHHCCCEEEECCEEEEEEe----CC-EEEEECCCceEEEECCEEEECcCCCcCC
Confidence 0000 1112334667799999887665 322 12 55554344 689999999999998874
No 263
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.76 E-value=1.4e-05 Score=90.42 Aligned_cols=45 Identities=31% Similarity=0.425 Sum_probs=40.5
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
|...+||+|||||++|++||..|++.|++|+|+|++ +.+||.|..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~------~~~GG~~~t 52 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQ------DHYGGEAAS 52 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCGGGCE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC------CCCCccccc
Confidence 445699999999999999999999999999999998 789998754
No 264
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.76 E-value=7.4e-05 Score=86.30 Aligned_cols=101 Identities=15% Similarity=0.189 Sum_probs=78.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------------------------------------cccHHH
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-------------------------------------TVDEEI 613 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-------------------------------------~~d~~~ 613 (866)
.+|+|||||+.|+.+|..|.+.|.+|+++++++.+.. .-.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 4799999999999999999999999999999864310 113677
Q ss_pred HHHHHHHHHHcCC--EEEeCceEEEEEEcCC--eEEEEEeeCCCCccceeEEEeccEEEEeec--cccCCCC
Q psy9583 614 AKKAFHLLNKQGL--NIILNTKIHDIKINKE--NVLINYSNKSTNVKTEIITSIFDKLLIAIG--RIPNTNN 679 (866)
Q Consensus 614 ~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~--~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G--~~p~~~~ 679 (866)
...+.+..++.|+ .++++++|+++..+++ .+.+.+. +|. ++.+|.||+|+| .+|+...
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~--~G~------~~~ad~lV~AtG~~s~p~~p~ 153 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLD--NEE------VVTCRFLISATGPLSASRMPD 153 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEET--TTE------EEEEEEEEECCCSCBC---CC
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC--CCC------EEEeCEEEECcCCCCCCcCCC
Confidence 7888888888888 7999999999986544 4555554 664 789999999999 5666543
No 265
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.74 E-value=8.1e-05 Score=82.19 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=69.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+ .+.... .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------~~~~~~-----~~--------------------------- 186 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE------QVMPGL-----LH--------------------------- 186 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS------SSSTTT-----SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc------chhhcc-----cC---------------------------
Confidence 4789999999999999999999999999999862 211100 00
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
. .+...+...+++.|++++.+..+. +.. ....+.+...+|+++.+|.||+|+|..|..
T Consensus 187 --~--------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 187 --P--------------AAAKAVQAGLEGLGVRFHLGPVLASLKK---AGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp --H--------------HHHHHHHHHHHTTTCEEEESCCEEEEEE---ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred --H--------------HHHHHHHHHHHHcCCEEEeCCEEEEEEe---cCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 0 001123445677899999887554 322 223455655677889999999999988763
No 266
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.74 E-value=1.1e-05 Score=92.67 Aligned_cols=58 Identities=7% Similarity=0.222 Sum_probs=46.4
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
...+.+.+.+.+++.|++|+++++|++|..+++++. |++ .+|+ ++.+|.||.+++...
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~--~~g~------~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHL--EDGR------RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE--TTSC------EEECSCEEECCC---
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEe--cCCc------EEEcCEEEECCCHHH
Confidence 356788889999999999999999999998887765 444 3776 899999999887543
No 267
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.73 E-value=0.00014 Score=83.81 Aligned_cols=101 Identities=15% Similarity=0.122 Sum_probs=79.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC--cCC------------CcccHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS--NFL------------NTVDEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~--~~l------------~~~d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
..+|+|||||+.|+.+|..+++.|.+|+++++.. .+. ....+++...+.+.+++.|++++.+++++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4579999999999999999999999999997531 111 01245778888888999999999999999
Q ss_pred EEEEcC---CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCC
Q psy9583 636 DIKINK---ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 636 ~i~~~~---~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
.+..+. +.+.+.+. +|. .+.+|.+|+|+|.+|...
T Consensus 292 ~i~~~~~~~~~~~V~~~--~g~------~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETA--SGA------VLKARSIIIATGAKWRNM 329 (521)
T ss_dssp EEECCSSTTSCEEEEET--TSC------EEEEEEEEECCCEEECCC
T ss_pred EEEeccCCCceEEEEEC--CCC------EEEcCEEEECCCCCcCCC
Confidence 997542 24555553 565 789999999999887653
No 268
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.73 E-value=0.00014 Score=78.62 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=76.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-----------CCCcc-----cHHHHHHHHHHHHHcCCEEEeCce
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-----------FLNTV-----DEEIAKKAFHLLNKQGLNIILNTK 633 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-----------~l~~~-----d~~~~~~l~~~l~~~GV~i~~~~~ 633 (866)
..+++|||+|+.|+.+|..|.+.|.+|+++++... ..+.+ .+++...+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 46899999999999999999999999999985311 01111 35677788888889999999987
Q ss_pred EEEEEEcCCeEEE-EEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 634 IHDIKINKENVLI-NYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 634 v~~i~~~~~~~~v-~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+.++.. .+.+.+ .+ .++. ++.+|.+|+|+|..|....
T Consensus 93 v~~i~~-~~~~~v~~~--~~g~------~~~~d~lviAtG~~~~~~~ 130 (335)
T 2a87_A 93 VESVSL-HGPLKSVVT--ADGQ------THRARAVILAMGAAARYLQ 130 (335)
T ss_dssp EEEEEC-SSSSEEEEE--TTSC------EEEEEEEEECCCEEECCCC
T ss_pred EEEEEe-CCcEEEEEe--CCCC------EEEeCEEEECCCCCccCCC
Confidence 888876 334444 33 3554 7999999999999886543
No 269
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.72 E-value=9.5e-05 Score=82.02 Aligned_cols=99 Identities=17% Similarity=0.250 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------ccHHHHH----------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------VDEEIAK---------------------------- 615 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------~d~~~~~---------------------------- 615 (866)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... +.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987764211 2222211
Q ss_pred ---------------HHHHHHHH--cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 616 ---------------KAFHLLNK--QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 616 ---------------~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+.+.|.+ .|++++++++|++++.+++++.+++. +|. ++.+|.||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g~------~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFS--DGT------KAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEET--TSC------EEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEEC--CCC------EEECCEEEECCCcchh
Confidence 12222322 38899999999999988888777664 565 7999999999998754
No 270
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.72 E-value=0.00014 Score=82.33 Aligned_cols=104 Identities=12% Similarity=0.100 Sum_probs=76.8
Q ss_pred eEEEECCcHHHHHHHHHHHhcC-----CcEEEEecCCcCCC---------c-----------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLG-----SEVTILEMSSNFLN---------T----------------------------- 608 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g-----~~Vtli~~~~~~l~---------~----------------------------- 608 (866)
+|+|||+|+.|+.+|..|++.| .+|+++++.+.+.- .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 89999998874210 0
Q ss_pred -------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEc---CCe--EEEEEeeCCCCccceeEEEeccEEEEe
Q psy9583 609 -------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKIN---KEN--VLINYSNKSTNVKTEIITSIFDKLLIA 670 (866)
Q Consensus 609 -------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~--~~v~~~~~~g~~~~~~~~~~~D~vi~a 670 (866)
...++.+++....++.+++++++++|++++.+ ++. +.+...+.+|. ..++.+|.||+|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~----~~~~~~d~lVlA 187 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGE----ELVRTTRALVVS 187 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSC----EEEEEESEEEEC
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCc----eEEEEeCEEEEC
Confidence 02344555556666678999999999999876 333 24554433332 347899999999
Q ss_pred eccccCCCC
Q psy9583 671 IGRIPNTNN 679 (866)
Q Consensus 671 ~G~~p~~~~ 679 (866)
+|..|..+.
T Consensus 188 tG~~p~~p~ 196 (463)
T 3s5w_A 188 PGGTPRIPQ 196 (463)
T ss_dssp CCCEECCCG
T ss_pred CCCCCCCcc
Confidence 999887543
No 271
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.72 E-value=1.7e-05 Score=91.62 Aligned_cols=45 Identities=27% Similarity=0.476 Sum_probs=38.9
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
|..++||+|||||+||++||..|++.|++|+|+|++ +.+||.|..
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~------~~~GGr~~t 45 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEAR------DRVGGRTYT 45 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSS------SSSBTTCCE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCC------CCCCCceee
Confidence 344689999999999999999999999999999998 688887643
No 272
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.69 E-value=0.0002 Score=80.77 Aligned_cols=97 Identities=18% Similarity=0.256 Sum_probs=76.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------------------c-----------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-------------------T----------------------- 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-------------------~----------------------- 608 (866)
.+|+|||||..|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 4799999999999999999999999999998764310 0
Q ss_pred --------------------c-----cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEE
Q psy9583 609 --------------------V-----DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITS 662 (866)
Q Consensus 609 --------------------~-----d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~ 662 (866)
+ ...+.+.+.+.+++.||+++++++|+++..+++. +.+.+. +|. .+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~--~G~------~i 178 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ--TGE------VL 178 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET--TCC------EE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC--CCC------EE
Confidence 0 1344556677788899999999999999876665 445443 554 68
Q ss_pred eccEEEEeecccc
Q psy9583 663 IFDKLLIAIGRIP 675 (866)
Q Consensus 663 ~~D~vi~a~G~~p 675 (866)
.+|.||+|+|..+
T Consensus 179 ~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 179 ETNHVVIAVGGKS 191 (447)
T ss_dssp ECSCEEECCCCSS
T ss_pred ECCEEEECCCCCc
Confidence 9999999999876
No 273
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.69 E-value=4.9e-05 Score=83.33 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=73.1
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---cc--------c-HHHHHHHHHHHHHcCCEEEeCceEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---TV--------D-EEIAKKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---~~--------d-~~~~~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
.+.+++|||||+.|+.+|..|++.| +|+++++.+.... .+ + .++.....+.+++.|++++.++.++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 3678999999999999999999999 9999998875321 11 1 11112234567788999999999998
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+..+... +. . ++. ++.+|.+|+|||.+|+...
T Consensus 86 id~~~~~--V~-~--~g~------~~~~d~lViATGs~p~~p~ 117 (367)
T 1xhc_A 86 IDRGRKV--VI-T--EKG------EVPYDTLVLATGARAREPQ 117 (367)
T ss_dssp EETTTTE--EE-E--SSC------EEECSEEEECCCEEECCCC
T ss_pred EECCCCE--EE-E--CCc------EEECCEEEECCCCCCCCCC
Confidence 8765432 33 2 454 7999999999999987654
No 274
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.67 E-value=8.7e-05 Score=83.30 Aligned_cols=100 Identities=16% Similarity=0.314 Sum_probs=74.3
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcCCC---cccH----------HHHHHHHHHHHHcCCEEEeCceE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNFLN---TVDE----------EIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~l~---~~d~----------~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
..+++|||||+.|+.+|..|++.|. +|+++++.+.+.- .+.. .+.....+.+++.|++++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999998 7999998765320 1111 11111245677889999999999
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+.+..++.. +.+. +|. ++.+|.+|+|+|.+|+...
T Consensus 84 ~~i~~~~~~--v~~~--~g~------~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINRDRQQ--VILS--DGR------ALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEETTTTE--EEET--TSC------EEECSEEEECCCEEECCCG
T ss_pred EEEECCCCE--EEEC--CCC------EEECCEEEEcCCCCccCCC
Confidence 999865543 3443 555 7999999999999987654
No 275
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.66 E-value=0.00013 Score=81.31 Aligned_cols=99 Identities=16% Similarity=0.303 Sum_probs=74.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCc--EEEEecCCcCCC---cccHHHH---------HHHHHHHHHcCCEEEeCceEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSE--VTILEMSSNFLN---TVDEEIA---------KKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~--Vtli~~~~~~l~---~~d~~~~---------~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
++++|||+|+.|+.+|..|++.|.+ |+++++.+.+.- .+...+. ....+.+++.|++++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999987 999998876421 2222111 1123456788999999999999
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+...... +.+ .+|. ++.+|.+++|||.+|....
T Consensus 83 id~~~~~--v~~--~~g~------~~~~d~lvlAtG~~p~~~~ 115 (410)
T 3ef6_A 83 LDVQTRT--ISL--DDGT------TLSADAIVIATGSRARTMA 115 (410)
T ss_dssp EETTTTE--EEE--TTSC------EEECSEEEECCCEEECCCC
T ss_pred EECCCCE--EEE--CCCC------EEECCEEEEccCCcccCCC
Confidence 9866543 333 3565 7999999999999887653
No 276
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.66 E-value=0.00027 Score=75.11 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=70.4
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc----------CCC---cccHHHHHHHHHHHHHcCCEEEeCceEEEEE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN----------FLN---TVDEEIAKKAFHLLNKQGLNIILNTKIHDIK 638 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~----------~l~---~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 638 (866)
.|+|||+|+.|+.+|..+++.|.+|+++++... +.. ...+++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 589999999999999999999999999997532 111 1235666666666666654444455555555
Q ss_pred EcC-CeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 639 INK-ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 639 ~~~-~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+ +...+... +|. ++.+|.+|+|||.+|....
T Consensus 88 ~~~~~~~~v~~~--~g~------~~~a~~liiATGs~p~~p~ 121 (304)
T 4fk1_A 88 KQSTGLFEIVTK--DHT------KYLAERVLLATGMQEEFPS 121 (304)
T ss_dssp ECTTSCEEEEET--TCC------EEEEEEEEECCCCEEECCS
T ss_pred ecCCCcEEEEEC--CCC------EEEeCEEEEccCCcccccc
Confidence 443 34455443 665 8999999999999887544
No 277
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.65 E-value=2.3e-05 Score=88.07 Aligned_cols=98 Identities=24% Similarity=0.262 Sum_probs=72.6
Q ss_pred CeEEEECCcHHHHHHHHHHHh--cCCcEEEEecCCcCCCc--c---------cHHHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRR--LGSEVTILEMSSNFLNT--V---------DEEIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~--~g~~Vtli~~~~~~l~~--~---------d~~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+... + ..++...+.+.+++.|++++. ..++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~-~~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFIN-EKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEEC-SCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEE-EEEEEE
Confidence 689999999999999999999 78899999998865321 0 111222234556678999986 488888
Q ss_pred EEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 638 ~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+.. .+.+. ++. ++.+|.+++|+|.+|+.+.
T Consensus 82 d~~~~--~v~~~--~g~------~i~~d~liiAtG~~~~~pg 113 (430)
T 3h28_A 82 DPDAN--TVTTQ--SGK------KIEYDYLVIATGPKLVFGA 113 (430)
T ss_dssp ETTTT--EEEET--TCC------EEECSEEEECCCCEEECCS
T ss_pred ECCCC--EEEEC--CCc------EEECCEEEEcCCcccccCC
Confidence 76654 33333 554 7999999999999987653
No 278
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00012 Score=82.95 Aligned_cols=99 Identities=16% Similarity=0.224 Sum_probs=67.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~---- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG------EIL---------SG---------------------F---- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS------SSS---------TT---------------------S----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC------ccc---------cc---------------------c----
Confidence 3689999999999999999999999999999862 211 00 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc--C-CceEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN--K-TKETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~--~-~g~~i~~d~lViATGs~p~ 545 (866)
..+ +...+...+++.||+++.+..+. +.. ....+.+.. . ++.++.+|.||+|+|..|.
T Consensus 210 -~~~--------------~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 210 -EKQ--------------MAAIIKKRLKKKGVEVVTNALAKGAEE---REDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp -CHH--------------HHHHHHHHHHHTTCEEEESEEEEEEEE---ETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred -CHH--------------HHHHHHHHHHHCCCEEEeCCEEEEEEE---eCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 000 01113345677899999987765 322 112344432 2 3468999999999999886
Q ss_pred C
Q psy9583 546 S 546 (866)
Q Consensus 546 ~ 546 (866)
.
T Consensus 272 ~ 272 (455)
T 1ebd_A 272 T 272 (455)
T ss_dssp C
T ss_pred c
Confidence 4
No 279
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.64 E-value=0.0003 Score=79.49 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=79.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-----c-------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-----T------------------------------------- 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-----~------------------------------------- 608 (866)
-+|+|||||+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998653200 0
Q ss_pred ----------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeC-CCCccceeEEEeccEEEEeecccc
Q psy9583 609 ----------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNK-STNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 609 ----------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+ ...+.+.+.+.+.+.|++++++++|+++..+++.+. +.+... +|. ..++.+|.||.|+|..+
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~----~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNE----ELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTE----EEEEECSEEEECCGGGC
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCc----eEEEEcCEEEECcCCch
Confidence 0 024566677777888999999999999988777654 555533 442 34789999999999876
Q ss_pred CC
Q psy9583 676 NT 677 (866)
Q Consensus 676 ~~ 677 (866)
..
T Consensus 163 ~v 164 (453)
T 3atr_A 163 SF 164 (453)
T ss_dssp TT
T ss_pred hh
Confidence 54
No 280
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.63 E-value=9.5e-05 Score=83.51 Aligned_cols=101 Identities=23% Similarity=0.346 Sum_probs=69.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCC------Ccc------cHHHHHHHHHHH-HHcCCEEEeCceE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFL------NTV------DEEIAKKAFHLL-NKQGLNIILNTKI 634 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l------~~~------d~~~~~~l~~~l-~~~GV~i~~~~~v 634 (866)
.++|+|||||+.|+.+|..|++. +.+|+++++.+.+. +.+ ..++.....+.+ ++.|+++++++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 36899999999999999999998 78999999987542 110 111222222334 6789999999999
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+.+..+ ...+.. .++ ...+.+|.+++|||.+|....
T Consensus 83 ~~i~~~--~~~v~~--~~g-----~~~~~~d~lviAtG~~p~~p~ 118 (449)
T 3kd9_A 83 IEVDTG--YVRVRE--NGG-----EKSYEWDYLVFANGASPQVPA 118 (449)
T ss_dssp EEECSS--EEEEEC--SSS-----EEEEECSEEEECCCEEECCCS
T ss_pred EEEecC--CCEEEE--CCc-----eEEEEcCEEEECCCCCCCCCC
Confidence 988543 333332 233 237899999999999887543
No 281
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.63 E-value=3.1e-05 Score=86.81 Aligned_cols=42 Identities=33% Similarity=0.628 Sum_probs=38.1
Q ss_pred cccceeeecCCccHHHHHHHHHHCC-CeEEEEeccCCCcccccCCCccc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+++||+|||||++|++||..|++.| ++|+|+|+. +.+||.+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~------~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERT------DHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSS------SCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECC------CCCCCccc
Confidence 4589999999999999999999999 999999998 67888763
No 282
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.63 E-value=0.0004 Score=76.46 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=76.1
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------c------------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------V------------------------------------ 609 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------~------------------------------------ 609 (866)
.|+|||||+.|+-+|..|++.|.+|+++++.+.+... +
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 4899999999999999999999999999986543110 0
Q ss_pred ---------------cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 610 ---------------DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 610 ---------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
-..+...+.+...+.|++++.+++++.+..+++.+.......++. ..++.+|.||.|.|..
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~----~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNE----IVDVRAKMVIAADGFE 161 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTE----EEEEEEEEEEECCCTT
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeeccccc----ceEEEEeEEEeCCccc
Confidence 023455666777788999999999999988877665443322333 4578999999999976
Q ss_pred c
Q psy9583 675 P 675 (866)
Q Consensus 675 p 675 (866)
.
T Consensus 162 S 162 (397)
T 3oz2_A 162 S 162 (397)
T ss_dssp C
T ss_pred c
Confidence 4
No 283
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.63 E-value=3e-05 Score=85.36 Aligned_cols=43 Identities=35% Similarity=0.562 Sum_probs=39.4
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
...+||+|||||++|++||..|++.|.+|+|+|+. +.+||.|.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~------~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRR------PHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEecc------CCCCCccc
Confidence 34699999999999999999999999999999997 78999885
No 284
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.62 E-value=0.00032 Score=74.79 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=74.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc----CC------------Cc-----ccHHHHHHHHHHHHHcCCEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN----FL------------NT-----VDEEIAKKAFHLLNKQGLNII 629 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~----~l------------~~-----~d~~~~~~l~~~l~~~GV~i~ 629 (866)
..|+|||+|+.|+.+|..++++|.+|+++++... +. +. ..+++...+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 3699999999999999999999999999987542 10 11 136778888888999999887
Q ss_pred eCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 630 LNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 630 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.. .+.......+...+... ++. ++.+|.+|+|||.+|....
T Consensus 85 ~~-~v~~~~~~~~~~~~~~~--~~~------~~~~~~liiATG~~~~~~~ 125 (314)
T 4a5l_A 85 TE-TIDHVDFSTQPFKLFTE--EGK------EVLTKSVIIATGATAKRMH 125 (314)
T ss_dssp CC-CEEEEECSSSSEEEEET--TCC------EEEEEEEEECCCEEECCCC
T ss_pred Ee-EEEEeecCCCceEEEEC--CCe------EEEEeEEEEcccccccccC
Confidence 54 45555544444444432 454 8999999999999887654
No 285
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.62 E-value=0.00039 Score=81.04 Aligned_cols=102 Identities=15% Similarity=0.215 Sum_probs=76.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 608 (866)
.+|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 47999999999999999999999999999987643210
Q ss_pred ----------------------------------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC-
Q psy9583 609 ----------------------------------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINK- 641 (866)
Q Consensus 609 ----------------------------------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~- 641 (866)
....+...+.+.+++.||+++++++++++..++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 012345566677788899999999999998765
Q ss_pred CeEE-EEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 642 ENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 642 ~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
+.+. +.+...+|. ...+.+|.||+|+|....
T Consensus 287 g~v~Gv~~~~~~g~----~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 287 GTVKGILVKGMYKG----YYWVKADAVILATGGFAK 318 (571)
T ss_dssp SCEEEEEEEETTTE----EEEEECSEEEECCCCCTT
T ss_pred CeEEEEEEEeCCCc----EEEEECCeEEEeCCCccc
Confidence 5443 444433443 347899999999997543
No 286
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.60 E-value=0.0001 Score=82.87 Aligned_cols=103 Identities=19% Similarity=0.297 Sum_probs=73.6
Q ss_pred eEEEECCcHHHHHHHHHHHhcC--CcEEEEecCCcCCC---cccHH-----------HHHHHHHHHHHcCCEEEeCceEE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLG--SEVTILEMSSNFLN---TVDEE-----------IAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g--~~Vtli~~~~~~l~---~~d~~-----------~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
||+|||||+.|+.+|..|+++| .+|+++++.+...- .++.- +.....+.+++.|++++.++.++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 5999999999999999999988 46999998765421 11100 11112345677899999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+......+.+.... .+ +..++.+|.+|+|||.+|+...
T Consensus 82 ~id~~~~~~~~~~~~-~~----~~~~~~yd~lVIATGs~p~~p~ 120 (437)
T 4eqs_A 82 AINDERQTVSVLNRK-TN----EQFEESYDKLILSPGASANSLG 120 (437)
T ss_dssp EEETTTTEEEEEETT-TT----EEEEEECSEEEECCCEEECCCC
T ss_pred EEEccCcEEEEEecc-CC----ceEEEEcCEEEECCCCcccccc
Confidence 998766555544321 12 2357899999999999987654
No 287
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.60 E-value=0.00011 Score=86.12 Aligned_cols=105 Identities=15% Similarity=0.299 Sum_probs=78.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCCC---cc-----------cHHHHHHHHHHHHHcCCEEEeCce
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFLN---TV-----------DEEIAKKAFHLLNKQGLNIILNTK 633 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l~---~~-----------d~~~~~~l~~~l~~~GV~i~~~~~ 633 (866)
.++|+|||||+.|+.+|..|++. |.+|+++++.+.+.- .+ +..+...+....++.|+++++++.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 57899999999999999999998 889999999887421 00 111233455666788999999999
Q ss_pred EEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 634 v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
|+++..++..+.+... .+|. ...+.+|.+++|+|.+|....
T Consensus 116 V~~id~~~~~v~v~~~-~~g~----~~~~~~d~lviAtG~~p~~p~ 156 (588)
T 3ics_A 116 VVKINKEEKTITIKNV-TTNE----TYNEAYDVLILSPGAKPIVPS 156 (588)
T ss_dssp EEEEETTTTEEEEEET-TTCC----EEEEECSEEEECCCEEECCCC
T ss_pred EEEEECCCCEEEEeec-CCCC----EEEEeCCEEEECCCCCCCCCC
Confidence 9999877766655432 1332 347899999999999887653
No 288
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.60 E-value=9.5e-05 Score=86.18 Aligned_cols=104 Identities=17% Similarity=0.201 Sum_probs=75.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCCC---ccc-----------HHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFLN---TVD-----------EEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l~---~~d-----------~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
++|+|||||+.|+.+|..|++. +.+|+++++.+.+.- .++ ..+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999998 789999999887521 011 011112233344579999999999
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+++..++..+.+... .+|. ..++.+|.+++|||.+|....
T Consensus 82 ~~id~~~~~v~~~~~-~~g~----~~~~~~d~lviAtG~~p~~p~ 121 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRL-LDGS----EYQESYDTLLLSPGAAPIVPP 121 (565)
T ss_dssp EEEETTTTEEEEEET-TTCC----EEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCEEEEEec-CCCC----eEEEECCEEEECCCCCCCCCC
Confidence 999877766554431 1232 347899999999999887654
No 289
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.59 E-value=0.00011 Score=83.21 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=68.6
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. +
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~------~~l---------~~---------------------~----- 205 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALED------RLL---------FQ---------------------F----- 205 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSS---------TT---------------------S-----
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC------ccc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCce-EEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKE-TITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~-~i~~d~lViATGs~p~~ 546 (866)
..++ ...+...+++.||+++.+..+. +.. ....+.+...+|+ ++.+|.||+|+|..|..
T Consensus 206 ~~~~--------------~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 206 DPLL--------------SATLAENMHAQGIETHLEFAVAALER---DAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp CHHH--------------HHHHHHHHHHTTCEEESSCCEEEEEE---ETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred CHHH--------------HHHHHHHHHHCCCEEEeCCEEEEEEE---eCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 0000 0113345677899999887554 322 1123556556777 89999999999998874
No 290
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.58 E-value=0.00048 Score=76.03 Aligned_cols=100 Identities=13% Similarity=0.184 Sum_probs=77.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------------------------------- 607 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------- 607 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3699999999999999999999999999998763210
Q ss_pred ccc--------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeec
Q psy9583 608 TVD--------------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIG 672 (866)
Q Consensus 608 ~~d--------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G 672 (866)
.++ ..+...+.+.+++.|++++.+++|+++..+++.+. +.+...++ ..++.+|.||.|.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~-----~~~~~a~~vV~A~G 159 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNE-----IVDVRAKMVIAADG 159 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTE-----EEEEEEEEEEECCC
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCe-----EEEEEcCEEEECCC
Confidence 000 12446667777788999999999999998877766 66643221 34899999999999
Q ss_pred ccc
Q psy9583 673 RIP 675 (866)
Q Consensus 673 ~~p 675 (866)
...
T Consensus 160 ~~s 162 (397)
T 3cgv_A 160 FES 162 (397)
T ss_dssp TTC
T ss_pred cch
Confidence 765
No 291
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.58 E-value=0.00013 Score=82.85 Aligned_cols=105 Identities=23% Similarity=0.344 Sum_probs=67.2
Q ss_pred CCeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCC------Cc-c------cHHH-------HHHHHHHHHHcCCE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFL------NT-V------DEEI-------AKKAFHLLNKQGLN 627 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l------~~-~------d~~~-------~~~l~~~l~~~GV~ 627 (866)
.++|+|||||+.|+.+|..|++. |.+|+++++.+.+. +. + ..++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 89999999988741 11 1 1111 12222223357999
Q ss_pred EEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 628 IILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 628 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
++++++++++..++..+.+... .+|. ...+.+|.+++|+|.+|....
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~-~~g~----~~~~~~d~lviAtG~~p~~p~ 129 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENL-RTGE----RRTLKYDKLVLALGSKANRPP 129 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEET-TTCC----EEEEECSEEEECCCEEECCCS
T ss_pred EEECCEEEEEECCCCEEEEeec-CCCC----EEEEECCEEEEeCCCCcCCCC
Confidence 9999999999877766554431 1232 347899999999999887643
No 292
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.58 E-value=0.00064 Score=78.02 Aligned_cols=103 Identities=18% Similarity=0.230 Sum_probs=78.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC--------CC----------c------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF--------LN----------T------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~--------l~----------~------------------------ 608 (866)
.+|+|||||..|+-+|..|++.|.+|+++++.+.. .+ .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 47999999999999999999999999999987510 00 0
Q ss_pred --------------------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccE
Q psy9583 609 --------------------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 609 --------------------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~ 666 (866)
+ ...+...+.+.+++.|++++.+++|+++..+++.+. +.+...+|. ..++.+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~----~~~i~ad~ 163 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGV----ELMAHARF 163 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSC----EEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCC----EEEEEcCE
Confidence 0 123455667777789999999999999998877654 555544553 34799999
Q ss_pred EEEeeccccCC
Q psy9583 667 LLIAIGRIPNT 677 (866)
Q Consensus 667 vi~a~G~~p~~ 677 (866)
||.|+|.....
T Consensus 164 VI~AdG~~S~v 174 (512)
T 3e1t_A 164 IVDASGNRTRV 174 (512)
T ss_dssp EEECCCTTCSS
T ss_pred EEECCCcchHH
Confidence 99999987543
No 293
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.58 E-value=0.00046 Score=75.22 Aligned_cols=57 Identities=12% Similarity=0.154 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCCEEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+...+.+.+++.|++++++++|+++..++++ +.+.+. +|+ ..++.+|.||+|+|...
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~--~g~----~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 152 LMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFG--GAE----PMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEEC--TTS----CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEEC--CCc----eeEEEeCEEEECCCcch
Confidence 3445566778889999999999999987655 665553 442 24799999999999764
No 294
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.57 E-value=0.00014 Score=82.84 Aligned_cols=100 Identities=16% Similarity=0.282 Sum_probs=67.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++. +.+....
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~------~~~l~~~----------------------------------- 222 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQ------PQIGASM----------------------------------- 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS------SSSSSSS-----------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeC------Ccccccc-----------------------------------
Confidence 67999999999999999999999999999986 2221100
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcC-----CceEEEecEEEEecCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINK-----TKETITAKYIIIATGSKA 544 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~-----~g~~i~~d~lViATGs~p 544 (866)
+ ..+...+...+++.||+++.++.+. +... ...+.+.+... ++.++.+|.||+|+|.+|
T Consensus 223 --~------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 223 --D------------GEVAKATQKFLKKQGLDFKLSTKVISAKRN-DDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp --C------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred --C------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-cCCCeEEEEEEEcCCCCceEEECCEEEECCCCCc
Confidence 0 0011123445778899999987665 3210 01122333322 346899999999999988
Q ss_pred cC
Q psy9583 545 RS 546 (866)
Q Consensus 545 ~~ 546 (866)
..
T Consensus 288 ~~ 289 (478)
T 1v59_A 288 YI 289 (478)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 295
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.57 E-value=0.00047 Score=73.49 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=73.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc---C--------CCc----ccHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN---F--------LNT----VDEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~---~--------l~~----~d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
-.|+|||+|+.|+.+|..+++.|.+|+++++... + .+. ..+++.........+.+..+..+....
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKS 86 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeee
Confidence 3689999999999999999999999999987531 0 011 236777777888888888888877766
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
....... ..+ . .++. ++.+|.+|+|||.+|....
T Consensus 87 ~~~~~~~-~~~-~--~~~~------~~~~d~liiAtGs~~~~~~ 120 (312)
T 4gcm_A 87 VEDKGEY-KVI-N--FGNK------ELTAKAVIIATGAEYKKIG 120 (312)
T ss_dssp EEECSSC-EEE-E--CSSC------EEEEEEEEECCCEEECCCC
T ss_pred eeeeecc-eee-c--cCCe------EEEeceeEEcccCccCcCC
Confidence 5543332 111 1 2444 8999999999999887644
No 296
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.56 E-value=4.2e-05 Score=86.54 Aligned_cols=42 Identities=33% Similarity=0.554 Sum_probs=38.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
++||+|||||++|++||..|++.|++|+|+|++ +.+||.|..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~------~~~GG~~~~ 46 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEAR------DRVGGRTWT 46 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC------CCCCCceec
Confidence 589999999999999999999999999999998 688988743
No 297
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.56 E-value=2.7e-05 Score=87.46 Aligned_cols=98 Identities=24% Similarity=0.300 Sum_probs=71.1
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcC--CcEEEEecCCcCC--Cccc---------HHHHHHHHHHHHHcCCEEEeCceEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLG--SEVTILEMSSNFL--NTVD---------EEIAKKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g--~~Vtli~~~~~~l--~~~d---------~~~~~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
.|+|+|||||+.|+.+|..|++++ .+||++++++.+. +.+. .++...+.+.+++.||+++.+ ++++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 478999999999999999999876 6899999987643 1111 111112234566789999865 6888
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
|..++.. +++ .+|+ ++.+|.+|+|+|.++...
T Consensus 81 Id~~~~~--V~~--~~g~------~i~YD~LViAtG~~~~~~ 112 (430)
T 3hyw_A 81 IDPDANT--VTT--QSGK------KIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETTTTE--EEE--TTCC------EEECSEEEECCCCEEECC
T ss_pred EECCCCE--EEE--CCCC------EEECCEEEEeCCCCccCC
Confidence 8876654 333 3666 899999999999876543
No 298
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.55 E-value=6.2e-05 Score=81.00 Aligned_cols=54 Identities=22% Similarity=0.195 Sum_probs=40.6
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccch
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSK 444 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~ 444 (866)
+||+|||||+||+.||..|++.|++|+|||+.+.+....+..+.+.+..|.|+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSi 55 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSL 55 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEE
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCC
Confidence 799999999999999999999999999999874322222233445555566653
No 299
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.55 E-value=0.00048 Score=80.14 Aligned_cols=102 Identities=18% Similarity=0.267 Sum_probs=76.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT------------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 608 (866)
-.|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 37999999999999999999999999999987643210
Q ss_pred ----------------------------------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC-
Q psy9583 609 ----------------------------------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINK- 641 (866)
Q Consensus 609 ----------------------------------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~- 641 (866)
....+...+.+.+++.||++++++.++++..++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 012344556677788899999999999998776
Q ss_pred CeEE-EEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 642 ENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 642 ~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
+.+. +.+...+|. ...+.+|.||+|+|....
T Consensus 282 g~v~Gv~~~~~~g~----~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 282 HSVVGAVVHGKHTG----YYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SBEEEEEEEETTTE----EEEEEEEEEEECCCCCTT
T ss_pred CcEEEEEEEeCCCc----EEEEEcCEEEEecCCccc
Confidence 5543 445433443 346899999999997554
No 300
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.55 E-value=4.4e-05 Score=83.75 Aligned_cols=42 Identities=29% Similarity=0.453 Sum_probs=38.8
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcccee
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNV 438 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~ 438 (866)
+||+|||||++|+++|.+|++.|++|+|+|++ +.+||.|...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~------~~~GG~~~~~ 43 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKR------NHIGGNAYTE 43 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSS------SSSSGGGCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecC------CCCCcceEee
Confidence 79999999999999999999999999999998 6899988653
No 301
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.54 E-value=0.00052 Score=79.31 Aligned_cols=100 Identities=17% Similarity=0.234 Sum_probs=79.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------------------------------------------- 606 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------------------------------------------- 606 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999875320
Q ss_pred -------C----c------------------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCC----eEEEEEeeCC
Q psy9583 607 -------N----T------------------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKE----NVLINYSNKS 652 (866)
Q Consensus 607 -------~----~------------------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----~~~v~~~~~~ 652 (866)
. . + ...+...+.+.+++.|+++++++++++++.+++ ++.+.+.+.+
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 0 0 0 134556667778888999999999999999887 8888887543
Q ss_pred CCccceeEEEeccEEEEeecccc
Q psy9583 653 TNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 653 g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+ ..++.+|.||.|.|...
T Consensus 166 ~-----~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 G-----EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp E-----EEEEEEEEEEECCCTTC
T ss_pred C-----eEEEEeCEEEECCCCcc
Confidence 3 24799999999999754
No 302
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.54 E-value=0.00043 Score=76.47 Aligned_cols=102 Identities=17% Similarity=0.195 Sum_probs=77.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC------CCc------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF------LNT------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~------l~~------------------------------------ 608 (866)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.. ...
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987631 000
Q ss_pred ------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC-CeEEEEEeeCCCCccceeEEEeccEEEE
Q psy9583 609 ------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINK-ENVLINYSNKSTNVKTEIITSIFDKLLI 669 (866)
Q Consensus 609 ------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~v~~~~~~g~~~~~~~~~~~D~vi~ 669 (866)
...++...+.+.+.+.|++++++++|++++.++ +.+.+++.. +|. ..++.+|.||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~-~g~----~~~~~a~~vV~ 157 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFER-DGE----RLRLDCDYIAG 157 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEE-TTE----EEEEECSEEEE
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEec-CCc----EEEEEeCEEEE
Confidence 013345566677777899999999999998763 456666632 443 23689999999
Q ss_pred eeccccCC
Q psy9583 670 AIGRIPNT 677 (866)
Q Consensus 670 a~G~~p~~ 677 (866)
|.|.....
T Consensus 158 AdG~~S~v 165 (394)
T 1k0i_A 158 CDGFHGIS 165 (394)
T ss_dssp CCCTTCST
T ss_pred CCCCCcHH
Confidence 99987664
No 303
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.52 E-value=0.00013 Score=82.38 Aligned_cols=100 Identities=17% Similarity=0.101 Sum_probs=68.5
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+++++.+ .+... +
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------~~l~~------~---------------------------- 206 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD------APLPS------F---------------------------- 206 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC------chhhh------h----------------------------
Confidence 3689999999999999999999999999999862 21100 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.+..+. +.. .....+.+...+|+++.+|.||+|+|..|..
T Consensus 207 -~~~--------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 207 -DPM--------------ISETLVEVMNAEGPQLHTNAIPKAVVK--NTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp -CHH--------------HHHHHHHHHHHHSCEEECSCCEEEEEE--CTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -hHH--------------HHHHHHHHHHHCCCEEEeCCEEEEEEE--eCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 000 01112344667799999886554 322 1112245555667789999999999998874
No 304
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.51 E-value=0.00013 Score=65.15 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=41.6
Q ss_pred EEEEEEEe-CCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCC
Q psy9583 18 ATLLNWHK-KEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGS 66 (866)
Q Consensus 18 g~i~~w~~-~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~ 66 (866)
|.|+.... ++|+.|++||+++.||++|+..+|.||.+|+|.+++..-.+
T Consensus 32 Gdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l~~ 81 (125)
T 3klr_A 32 GDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAE 81 (125)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGTT
T ss_pred CCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhhhh
Confidence 45555544 79999999999999999999999999999999988755443
No 305
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.50 E-value=4.7e-05 Score=86.66 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCCe-EEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKEN-VLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
.+.+.+.+.+++.|++|++++.|++|+.++++ +.+.. ++. ++.+|.||+|++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~---~~~------~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL---RDS------SLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC---SSC------EEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE---CCe------EEEcCEEEECCCHH
Confidence 56778888899999999999999999887655 55533 343 78999999999753
No 306
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.50 E-value=0.00014 Score=80.96 Aligned_cols=98 Identities=13% Similarity=0.265 Sum_probs=73.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcCCC---cc----------cHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNFLN---TV----------DEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~l~---~~----------d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
++++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .+ ..++.....+.+.+.|++++. ++++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 8999998774311 11 111222345667788999999 9999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+..+... +.+. +|. .+.+|.+++|||.+|....
T Consensus 81 ~id~~~~~--v~~~--~g~------~~~~d~lvlAtG~~p~~~~ 114 (404)
T 3fg2_P 81 SIDREGRK--LLLA--SGT------AIEYGHLVLATGARNRMLD 114 (404)
T ss_dssp EEETTTTE--EEES--SSC------EEECSEEEECCCEEECCCC
T ss_pred EEECCCCE--EEEC--CCC------EEECCEEEEeeCCCccCCC
Confidence 99866543 3333 555 8999999999999887543
No 307
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.50 E-value=0.00026 Score=80.52 Aligned_cols=100 Identities=20% Similarity=0.309 Sum_probs=68.0
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+... . +
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~~l~~--------~---------------------~----- 218 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG------HVGGV--------G---------------------I----- 218 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSSCS--------S---------------------C-----
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC------ccCCc--------c---------------------c-----
Confidence 679999999999999999999999999999862 21100 0 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEE-----cCCceEEEecEEEEecCCCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQII-----NKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~-----~~~g~~i~~d~lViATGs~p 544 (866)
..+ +...+...+++.||+++.++.+. +.. + ....+.+. +.++.++.+|.||+|+|.+|
T Consensus 219 ~~~--------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~-~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 219 DME--------------ISKNFQRILQKQGFKFKLNTKVTGATK-K-SDGKIDVSIEAASGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp CHH--------------HHHHHHHHHHHTTCEEECSEEEEEEEE-C-TTSCEEEEEEETTSCCCEEEEESEEEECSCEEE
T ss_pred CHH--------------HHHHHHHHHHHCCCEEEeCceEEEEEE-c-CCceEEEEEEecCCCCceEEEcCEEEECcCCCc
Confidence 000 01123445778899999987766 322 1 11114443 34557899999999999988
Q ss_pred cC
Q psy9583 545 RS 546 (866)
Q Consensus 545 ~~ 546 (866)
..
T Consensus 283 ~~ 284 (474)
T 1zmd_A 283 FT 284 (474)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 308
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.49 E-value=5.6e-05 Score=86.80 Aligned_cols=44 Identities=27% Similarity=0.351 Sum_probs=38.0
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
|.+.+||+|||||++|++||..|++.|++|+|+|+. +.+||.+.
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~------~~~GG~~~ 53 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE------GKAGGKLR 53 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS------SSSCSSCC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeC------CCCCCcee
Confidence 445689999999999999999999999999999998 78888763
No 309
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.49 E-value=0.00026 Score=82.16 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=79.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------------------------------------C-----c
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL-------------------------------------N-----T 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l-------------------------------------~-----~ 608 (866)
..|+|||||+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999754210 0 0
Q ss_pred ---------------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeec
Q psy9583 609 ---------------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIG 672 (866)
Q Consensus 609 ---------------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G 672 (866)
+ ...+...+.+.+++.|++++++++|++++.+++++.+++...+|. .++.+|+||.|.|
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-----~~~~a~~vV~ADG 204 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-----YPVRARYGVGCDG 204 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-----EEEEESEEEECSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-----EEEEeCEEEEcCC
Confidence 0 134566677778888999999999999998888888887644551 3799999999999
Q ss_pred ccc
Q psy9583 673 RIP 675 (866)
Q Consensus 673 ~~p 675 (866)
...
T Consensus 205 ~~S 207 (570)
T 3fmw_A 205 GRS 207 (570)
T ss_dssp SSC
T ss_pred CCc
Confidence 765
No 310
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.49 E-value=0.00012 Score=82.84 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=74.9
Q ss_pred eEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCCC-----------cc---c-HHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFLN-----------TV---D-EEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l~-----------~~---d-~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
+++|||||+.|+.+|..|++. |.+|+++++.+.+.. .. + .++...+.+.+++.|++++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 689999999999999999998 999999999875311 00 1 111122346677889999999999
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+..+++.+.+... .++. ..++.+|.+++|+|.+|....
T Consensus 82 ~~i~~~~~~v~v~~~-~~g~----~~~~~~d~lviAtGs~p~~p~ 121 (452)
T 2cdu_A 82 TNVDPETKTIKVKDL-ITNE----EKTEAYDKLIMTTGSKPTVPP 121 (452)
T ss_dssp EEEEGGGTEEEEEET-TTCC----EEEEECSEEEECCCEEECCCC
T ss_pred EEEEcCCCEEEEEec-CCCc----eEEEECCEEEEccCCCcCCCC
Confidence 998766665554321 1221 247999999999999887654
No 311
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.48 E-value=7.8e-05 Score=82.83 Aligned_cols=99 Identities=16% Similarity=0.298 Sum_probs=70.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcC--CcEEEEecCCcCCC-cccHHH---------HHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLG--SEVTILEMSSNFLN-TVDEEI---------AKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g--~~Vtli~~~~~~l~-~~d~~~---------~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
+|+|+|||||+.|+.+|..|++.+ .+|+++++++.+.. .+...+ ...-.+.+.++||+++.+ +++.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 689999999999999999998876 48999998875421 111111 111124566789999854 68888
Q ss_pred EEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 638 ~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+... +.+ .+|. ++.+|.+++|+|.+++...
T Consensus 81 d~~~~~--v~~--~~g~------~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DPDKKL--VKT--AGGA------EFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ETTTTE--EEE--TTSC------EEECSEEEECCCEEECGGG
T ss_pred EccCcE--EEe--cccc------eeecceeeeccCCccccCC
Confidence 766543 233 3665 8999999999999887643
No 312
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.48 E-value=0.00041 Score=76.19 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
.+...+.+.+++.|++++.++.|+++..+++++.+.. .+| ++.+|.||+|+|...
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~--~~g-------~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKT--PSG-------DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEE--TTE-------EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEc--CCc-------eEEcCEEEECCChhH
Confidence 3556677788889999999999999987776664433 232 689999999999854
No 313
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.47 E-value=6.8e-05 Score=85.71 Aligned_cols=41 Identities=27% Similarity=0.621 Sum_probs=37.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
+.+||+|||||++||+||..|++.|++|+|+|+. +.+||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~------~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEAR------TRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS------SSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecc------CCCCCce
Confidence 3589999999999999999999999999999998 6778864
No 314
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.47 E-value=0.00015 Score=80.83 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=75.1
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCc--EEEEecCCcCCC---cc----------cHHHHHHHHHHHHHcCCEEEeCceE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSE--VTILEMSSNFLN---TV----------DEEIAKKAFHLLNKQGLNIILNTKI 634 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~--Vtli~~~~~~l~---~~----------d~~~~~~l~~~l~~~GV~i~~~~~v 634 (866)
..+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.- .+ ...+.....+.+++.|++++.++++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 35899999999999999999999987 999998765311 11 1122223356677899999999999
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+.+...... +.+ .++. .+.+|.+++|+|.+|....
T Consensus 89 ~~id~~~~~--v~~--~~g~------~~~~d~lvlAtG~~~~~~~ 123 (415)
T 3lxd_A 89 VSLDPAAHT--VKL--GDGS------AIEYGKLIWATGGDPRRLS 123 (415)
T ss_dssp EEEETTTTE--EEE--TTSC------EEEEEEEEECCCEECCCCB
T ss_pred EEEECCCCE--EEE--CCCC------EEEeeEEEEccCCccCCCC
Confidence 999766543 333 3565 8999999999999887643
No 315
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.47 E-value=0.00023 Score=80.26 Aligned_cols=104 Identities=20% Similarity=0.250 Sum_probs=75.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCC--C-cc----------cHHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFL--N-TV----------DEEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l--~-~~----------d~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+. + .+ ..++.....+.+++.|++++.++.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 3699999999999999999998 89999999987542 1 00 01112223466778899999999999
Q ss_pred EEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 636 DIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 636 ~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+..+++.+.+... .+|. ..++.+|.+++|+|.+|....
T Consensus 81 ~i~~~~~~v~~~~~-~~g~----~~~~~~d~lviAtG~~p~~p~ 119 (447)
T 1nhp_A 81 AIQPKEHQVTVKDL-VSGE----ERVENYDKLIISPGAVPFELD 119 (447)
T ss_dssp EEETTTTEEEEEET-TTCC----EEEEECSEEEECCCEEECCCC
T ss_pred EEeCCCCEEEEEec-CCCc----eEEEeCCEEEEcCCCCcCCCC
Confidence 98776665544321 2343 235899999999999987654
No 316
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.47 E-value=0.00045 Score=74.76 Aligned_cols=96 Identities=14% Similarity=0.266 Sum_probs=69.6
Q ss_pred CeEEEECCcHHHHHHHHHHHh---cCCcEEEEecCCcCCC--------------------cc---cH---HHH-------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRR---LGSEVTILEMSSNFLN--------------------TV---DE---EIA------- 614 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~---~g~~Vtli~~~~~~l~--------------------~~---d~---~~~------- 614 (866)
.+|+|||||..|+-+|..|++ .|.+|+++++.+.+.. .+ +. .+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 369999999999999999999 8999999998653211 00 00 111
Q ss_pred -------------------------------HHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEe
Q psy9583 615 -------------------------------KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 615 -------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~ 663 (866)
..+....++.|++++++++|++++.+++++.+.+. +|. .+.
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~--~g~------~~~ 153 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQ--TGS------PEQ 153 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEES--SSC------CEE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEEC--CCC------EEE
Confidence 11122223348999999999999998888776664 554 578
Q ss_pred ccEEEEeeccc
Q psy9583 664 FDKLLIAIGRI 674 (866)
Q Consensus 664 ~D~vi~a~G~~ 674 (866)
+|.||+|+...
T Consensus 154 ad~vV~A~p~~ 164 (342)
T 3qj4_A 154 FDLIVLTMPVP 164 (342)
T ss_dssp ESEEEECSCHH
T ss_pred cCEEEECCCHH
Confidence 99999999753
No 317
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.47 E-value=5.1e-05 Score=87.37 Aligned_cols=41 Identities=32% Similarity=0.409 Sum_probs=37.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCC-CeEEEEeccCCCcccccCCCccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~~~~~~~~~GG~~~ 436 (866)
.+||+|||||++||+||..|++.| ++|+|+|+. +.+||.+.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~------~riGGr~~ 49 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEAR------DRVGGRLQ 49 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSS------SSSBTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCC------CCCCCcee
Confidence 489999999999999999999999 999999998 78898763
No 318
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.47 E-value=0.00081 Score=78.20 Aligned_cols=103 Identities=24% Similarity=0.292 Sum_probs=76.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-----------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT----------------------------------------- 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 608 (866)
..+|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999986643200
Q ss_pred -----------------------------------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC
Q psy9583 609 -----------------------------------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINK 641 (866)
Q Consensus 609 -----------------------------------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~ 641 (866)
....+...+.+.+++.||++++++.++++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 012344566677788899999999999997665
Q ss_pred -CeEE-EEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 642 -ENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 642 -~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
+.+. +.+.+.+|. ...+.+|.||+|+|..++
T Consensus 286 ~g~v~GV~~~~~~G~----~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKGEYTG----YYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEETTTE----EEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeCCCc----EEEEEcCEEEEeCCCCcc
Confidence 4433 444433443 347899999999997664
No 319
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.47 E-value=7.9e-05 Score=81.30 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=38.9
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
.+.+||+|||||++|++||..|++.|++|+|+|+.+ +.+||.|..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~-----~~vGGr~~t 86 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANA-----NRVGGRIKT 86 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCS-----SCCBTTCCE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccc-----cccCCceee
Confidence 346899999999999999999999999999999851 368888753
No 320
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.46 E-value=0.00046 Score=81.70 Aligned_cols=34 Identities=35% Similarity=0.612 Sum_probs=32.2
Q ss_pred ccceeeecCCccHHHHHHHHHH-----CCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-----LGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-----~g~~V~liek~~ 423 (866)
++||+||||||+|+++|..|++ .|++|+|||+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 5899999999999999999999 999999999974
No 321
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.46 E-value=4.4e-05 Score=86.66 Aligned_cols=42 Identities=19% Similarity=0.331 Sum_probs=37.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCC------CeEEEEeccCCCcccccCCCccce
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG------FKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g------~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
++||+|||||++||+||++|++.| ++|+|+|+. +.+||.+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~------~~~GG~~~s 52 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEAS------PRVGGKIQT 52 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSS------SSSCTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECC------CCCCceEEE
Confidence 489999999999999999999999 999999997 678886543
No 322
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.45 E-value=7.4e-05 Score=83.90 Aligned_cols=58 Identities=19% Similarity=0.226 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 611 EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 611 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
..+.+.+.+.+++.|+++++++.|++|..+++++..... +|. ++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~--~g~------~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS--EGE------VARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE--TTE------EEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE--CCe------EEECCEEEECCCCCcc
Confidence 467788888888999999999999999887776654333 554 7899999999998764
No 323
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.45 E-value=7.4e-05 Score=83.96 Aligned_cols=47 Identities=26% Similarity=0.410 Sum_probs=41.6
Q ss_pred hcccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcccee
Q psy9583 386 IMNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNV 438 (866)
Q Consensus 386 ~m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~ 438 (866)
.|...+||+|||+|.+|+.+|..|++.|++|+++|++ +.+||.|...
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~------~~~Gg~~~s~ 62 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRN------PYYGGETASL 62 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS------SSSCGGGCEE
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEecc------CCCCCCcccc
Confidence 4555799999999999999999999999999999998 7899988654
No 324
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.45 E-value=0.001 Score=75.91 Aligned_cols=102 Identities=14% Similarity=0.159 Sum_probs=80.2
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC------------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------------------------------ 607 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------ 607 (866)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 45799999999999999999999999999987543210
Q ss_pred -----c------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 608 -----T------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 608 -----~------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
. + ...+...+.+.+++.|+++++++++++++.+++++.+++.+.+| ..++.+|.||.|.|...
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g-----~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDG-----PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSC-----EEEEEEEEEEECCCTTC
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCC-----cEEEEeCEEEEccCccc
Confidence 0 0 13455666777778899999999999999988888888764333 24789999999999865
Q ss_pred C
Q psy9583 676 N 676 (866)
Q Consensus 676 ~ 676 (866)
.
T Consensus 167 ~ 167 (499)
T 2qa2_A 167 T 167 (499)
T ss_dssp H
T ss_pred H
Confidence 3
No 325
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.44 E-value=0.001 Score=75.97 Aligned_cols=102 Identities=17% Similarity=0.145 Sum_probs=79.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC------------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------------------------------ 607 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------ 607 (866)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 90 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDF 90 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceeccc
Confidence 35799999999999999999999999999987543210
Q ss_pred -----c------c-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 608 -----T------V-DEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 608 -----~------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
. + -..+...+.+.+++.|+++++++++++++.+++++.+++.+.+| ..++.+|.||.|.|...
T Consensus 91 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g-----~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 91 GVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEG-----KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTE-----EEEEEESEEEECCCTTC
T ss_pred ccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCC-----CEEEEeCEEEECCCcch
Confidence 0 0 13455666677778899999999999999988888888774433 24789999999999865
Q ss_pred C
Q psy9583 676 N 676 (866)
Q Consensus 676 ~ 676 (866)
.
T Consensus 166 ~ 166 (500)
T 2qa1_A 166 S 166 (500)
T ss_dssp H
T ss_pred H
Confidence 3
No 326
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.44 E-value=0.00019 Score=80.84 Aligned_cols=89 Identities=19% Similarity=0.312 Sum_probs=70.1
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC-------CCc--ccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF-------LNT--VDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~-------l~~--~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .+. ++.++.....+.+++.||++++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 3578999999999999999999999999999998765 222 366778888889999999999988762
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
. . +.+. ++ ...+|.|++|+|..
T Consensus 197 -~-~--v~~~--~~-------~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 -R-D--ASLP--EL-------RRKHVAVLVATGVY 218 (456)
T ss_dssp -T-T--BCHH--HH-------HSSCSEEEECCCCC
T ss_pred -c-E--EEhh--Hh-------HhhCCEEEEecCCC
Confidence 0 1 1111 11 35699999999986
No 327
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.43 E-value=0.00066 Score=75.41 Aligned_cols=98 Identities=15% Similarity=0.269 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC------------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------------------------------ 607 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------ 607 (866)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~g 102 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSG 102 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCCC
Confidence 45899999999999999999999999999998764310
Q ss_pred ----ccc-----------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccE
Q psy9583 608 ----TVD-----------------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDK 666 (866)
Q Consensus 608 ----~~d-----------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~ 666 (866)
.++ ..+.+.+.+.+.+ ++++++++|++++.+++++.+.+. +|. ++.+|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~--~g~------~~~a~~ 172 (407)
T 3rp8_A 103 ENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFT--DGS------SASGDL 172 (407)
T ss_dssp CEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEET--TSC------EEEESE
T ss_pred CEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEc--CCC------EEeeCE
Confidence 000 1233344444444 789999999999998888777664 665 899999
Q ss_pred EEEeeccccCC
Q psy9583 667 LLIAIGRIPNT 677 (866)
Q Consensus 667 vi~a~G~~p~~ 677 (866)
||.|.|.....
T Consensus 173 vV~AdG~~S~v 183 (407)
T 3rp8_A 173 LIAADGSHSAL 183 (407)
T ss_dssp EEECCCTTCSS
T ss_pred EEECCCcChHH
Confidence 99999987544
No 328
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.43 E-value=7.5e-05 Score=81.71 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=33.7
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
|+.++||+|||||++|+++|++|++.|++|+|||+.
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 555799999999999999999999999999999996
No 329
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.42 E-value=0.00032 Score=78.04 Aligned_cols=100 Identities=13% Similarity=0.238 Sum_probs=72.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcCCC---cccHHHHHH-H-----HHHHHHcCCEEEeCceEEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNFLN---TVDEEIAKK-A-----FHLLNKQGLNIILNTKIHDIK 638 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~l~---~~d~~~~~~-l-----~~~l~~~GV~i~~~~~v~~i~ 638 (866)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .+...+... . .+.+++.|++++.++.++.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 4679999999999999999999987 4999999876431 222222110 0 003556799999999999987
Q ss_pred EcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 639 INKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 639 ~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+... +.+. +|. ++.+|.+|+|+|.+|....
T Consensus 87 ~~~~~--v~~~--~g~------~~~~d~lviAtG~~~~~~~ 117 (408)
T 2gqw_A 87 PQAHT--VALS--DGR------TLPYGTLVLATGAAPRALP 117 (408)
T ss_dssp TTTTE--EEET--TSC------EEECSEEEECCCEEECCCG
T ss_pred CCCCE--EEEC--CCC------EEECCEEEECCCCCCCCCC
Confidence 65433 3343 555 7999999999999887643
No 330
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.41 E-value=0.00071 Score=78.20 Aligned_cols=99 Identities=19% Similarity=0.290 Sum_probs=74.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--------C-------------cc----------------cHHH
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--------N-------------TV----------------DEEI 613 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--------~-------------~~----------------d~~~ 613 (866)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .+ .+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999876431 0 01 1345
Q ss_pred HHHHHHHHHHcC--CEEEeCceEEEEEEcCC--eEEEEEeeCCCCccceeEEEeccEEEEeecc--ccCC
Q psy9583 614 AKKAFHLLNKQG--LNIILNTKIHDIKINKE--NVLINYSNKSTNVKTEIITSIFDKLLIAIGR--IPNT 677 (866)
Q Consensus 614 ~~~l~~~l~~~G--V~i~~~~~v~~i~~~~~--~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~--~p~~ 677 (866)
.+++....++.+ +.++++++|++++.+++ .+.+.+. +|. ++.+|.||+|+|. .|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~--~G~------~~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTN--HGD------RIRARYLIMASGQLSVPQL 158 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEET--TCC------EEEEEEEEECCCSCCCCCC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEEC--CCC------EEEeCEEEECcCCCCCCCC
Confidence 555666566655 67899999999987653 5566553 565 7899999999995 4543
No 331
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.41 E-value=8.8e-05 Score=81.81 Aligned_cols=42 Identities=29% Similarity=0.488 Sum_probs=38.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
++||+|||||++|+++|..|++.|++|+|+|++ +.+||.|..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~------~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQR------DHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS------SSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEec------CCcCCcccc
Confidence 489999999999999999999999999999998 788988743
No 332
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.39 E-value=0.00053 Score=75.96 Aligned_cols=101 Identities=19% Similarity=0.347 Sum_probs=73.1
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-----cc---c---HH----------H---------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-----TV---D---EE----------I--------------- 613 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-----~~---d---~~----------~--------------- 613 (866)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... .+ . .. +
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 46899999999999999999999999999998764321 00 0 00 0
Q ss_pred ---------------------HHHHHHHHHHc--CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEe
Q psy9583 614 ---------------------AKKAFHLLNKQ--GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIA 670 (866)
Q Consensus 614 ---------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a 670 (866)
...+.+.|.+. +++++++++|++++.+++++.+++. +|. ++.+|.||.|
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g~------~~~ad~vV~A 177 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFE--NKP------SETADLVILA 177 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEET--TSC------CEEESEEEEC
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEEC--CCc------EEecCEEEEC
Confidence 01122233221 3578999999999988777777664 565 6899999999
Q ss_pred eccccCCC
Q psy9583 671 IGRIPNTN 678 (866)
Q Consensus 671 ~G~~p~~~ 678 (866)
.|......
T Consensus 178 dG~~S~vR 185 (398)
T 2xdo_A 178 NGGMSKVR 185 (398)
T ss_dssp SCTTCSCC
T ss_pred CCcchhHH
Confidence 99876543
No 333
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.39 E-value=0.00032 Score=80.32 Aligned_cols=99 Identities=12% Similarity=0.048 Sum_probs=68.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. +
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~----- 215 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGN------RIL---------RK---------------------F----- 215 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS------SSC---------TT---------------------S-----
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCC------ccC---------cc---------------------c-----
Confidence 679999999999999999999999999999862 210 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceE-EEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKET-ITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~-i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.+..+. +.. + ....+.+...+|++ +.+|.||+|+|..|..
T Consensus 216 d~~--------------~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 216 DES--------------VINVLENDMKKNNINIVTFADVVEIKK-V-SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp CHH--------------HHHHHHHHHHHTTCEEECSCCEEEEEE-S-STTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred chh--------------hHHHHHHHHHhCCCEEEECCEEEEEEE-c-CCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 000 01113445778899999887655 322 1 11224555556766 9999999999998874
No 334
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.39 E-value=0.00022 Score=64.88 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=39.4
Q ss_pred EEEEEEEe-CCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecC
Q psy9583 18 ATLLNWHK-KEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITD 64 (866)
Q Consensus 18 g~i~~w~~-~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~ 64 (866)
|.|+-... ++|+.|++||+++.||++|+..+|.||.+|+|.+++-.-
T Consensus 54 GdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~L 101 (143)
T 3mxu_A 54 GDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAAL 101 (143)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGG
T ss_pred CCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhhh
Confidence 34444333 899999999999999999999999999999999886544
No 335
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.39 E-value=0.0012 Score=76.86 Aligned_cols=101 Identities=26% Similarity=0.325 Sum_probs=78.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC-------------------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL------------------------------------------- 606 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l------------------------------------------- 606 (866)
..+|+|||||+.|+-+|..|++.|.+|+++++.+...
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 4689999999999999999999999999999863110
Q ss_pred -----------------C---cc-cHHHHHHHHHHHHHcCCEEEeCceEEEEEEc-CCeEEEEEeeCCCCccceeEEEec
Q psy9583 607 -----------------N---TV-DEEIAKKAFHLLNKQGLNIILNTKIHDIKIN-KENVLINYSNKSTNVKTEIITSIF 664 (866)
Q Consensus 607 -----------------~---~~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~~~~~g~~~~~~~~~~~ 664 (866)
+ .+ ...+...+.+.+++.|++++.+++|+++..+ ++.+.+.+.. +|. ..++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~-~G~----~~~i~A 177 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR-GGE----SVTVES 177 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE-TTE----EEEEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec-CCc----eEEEEc
Confidence 0 01 1345666777888899999999999999875 4456666653 442 247999
Q ss_pred cEEEEeecccc
Q psy9583 665 DKLLIAIGRIP 675 (866)
Q Consensus 665 D~vi~a~G~~p 675 (866)
|.||.|+|...
T Consensus 178 dlVV~AdG~~S 188 (591)
T 3i3l_A 178 DFVIDAGGSGG 188 (591)
T ss_dssp SEEEECCGGGC
T ss_pred CEEEECCCCcc
Confidence 99999999865
No 336
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.39 E-value=0.00083 Score=77.80 Aligned_cols=98 Identities=13% Similarity=0.220 Sum_probs=72.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-CC-----Cc-----------------------------------
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-FL-----NT----------------------------------- 608 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-~l-----~~----------------------------------- 608 (866)
.-.|+|||||..|+++|..+++.|.+|.++++.+. +. +.
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 45899999999999999999999999999998741 10 00
Q ss_pred -------------cc-HHHHHHHHHHHHHc-CCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeec
Q psy9583 609 -------------VD-EEIAKKAFHLLNKQ-GLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIG 672 (866)
Q Consensus 609 -------------~d-~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G 672 (866)
.| ..+...+.+.+++. |++++ +..|+.+..+++.+. +.+ .+|. .+.+|.||+|+|
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t--~~G~------~i~Ad~VVLATG 171 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTV--RSGR------AIQAKAAILACG 171 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEE--TTSC------EEEEEEEEECCT
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEE--CCCc------EEEeCEEEECcC
Confidence 01 13455666677774 99996 458888877666655 444 3565 799999999999
Q ss_pred cccC
Q psy9583 673 RIPN 676 (866)
Q Consensus 673 ~~p~ 676 (866)
..++
T Consensus 172 ~~s~ 175 (641)
T 3cp8_A 172 TFLN 175 (641)
T ss_dssp TCBT
T ss_pred CCCC
Confidence 7654
No 337
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.38 E-value=0.00088 Score=73.26 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+...+.+.+++.|++++.+++|++++.+++++.+.. .+| ++.+|.||+|+|...
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~--~~g-------~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIET--ADG-------EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE--SSC-------EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEE--CCC-------eEEcCEEEEcCCccH
Confidence 344556677788999999999999998776655543 233 589999999999654
No 338
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.00029 Score=80.16 Aligned_cols=101 Identities=18% Similarity=0.131 Sum_probs=68.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~---- 224 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE------TVL---------RK---------------------F---- 224 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS------SSC---------TT---------------------S----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC------ccc---------cc---------------------c----
Confidence 3679999999999999999999999999999862 210 00 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~ 546 (866)
..++ ...+...+++.||+++.+..+. +.. +.+...+.+...+| .++.+|.||+|+|.+|..
T Consensus 225 -d~~~--------------~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 225 -DECI--------------QNTITDHYVKEGINVHKLSKIVKVEK-NVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp -CHHH--------------HHHHHHHHHHHTCEEECSCCEEEEEE-CC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred -CHHH--------------HHHHHHHHHhCCeEEEeCCEEEEEEE-cCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 0000 0113345667799999887655 321 11111245555667 789999999999998875
No 339
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.38 E-value=0.00016 Score=82.53 Aligned_cols=99 Identities=11% Similarity=0.060 Sum_probs=67.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+|+++.+ .+- |. .
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~------~~l---------~~---------------------~---- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD------GLM---------QG---------------------A---- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS------SSS---------TT---------------------S----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC------ccc---------cc---------------------c----
Confidence 3689999999999999999999999999999862 210 00 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCC----ceEEEecEEEEecCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKT----KETITAKYIIIATGSKA 544 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~----g~~i~~d~lViATGs~p 544 (866)
..+ +...+...+++.||+++.+..+. +.. ....+.+...+ ++++.+|.||+|+|..|
T Consensus 225 -~~~--------------~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 225 -DRD--------------LVKVWQKQNEYRFDNIMVNTKTVAVEP---KEDGVYVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp -CHH--------------HHHHHHHHHGGGEEEEECSCEEEEEEE---ETTEEEEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred -CHH--------------HHHHHHHHHHhcCCEEEECCEEEEEEE---cCCeEEEEEeccCCCceEEEcCEEEECcCCCc
Confidence 000 01113445677899999886655 322 11233343333 56789999999999988
Q ss_pred cC
Q psy9583 545 RS 546 (866)
Q Consensus 545 ~~ 546 (866)
..
T Consensus 287 ~~ 288 (482)
T 1ojt_A 287 NG 288 (482)
T ss_dssp CG
T ss_pred CC
Confidence 63
No 340
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.37 E-value=0.0011 Score=72.64 Aligned_cols=52 Identities=8% Similarity=0.045 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
..+.+.+++.|++++.+++|+++..+++.+. +.. .+| ++.+|.||+|+|...
T Consensus 153 ~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~--~~g-------~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 153 TAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKT--NKG-------IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE--TTE-------EEECSEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEE--CCc-------EEECCEEEECcchhH
Confidence 3456677788999999999999998776665 443 233 689999999999764
No 341
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=97.37 E-value=0.00024 Score=79.04 Aligned_cols=65 Identities=22% Similarity=0.325 Sum_probs=58.2
Q ss_pred CeEEEEEEEe-CCCCeeeCCCeEEEEEec------------------------------------------------cee
Q psy9583 16 SEATLLNWHK-KEGELVVRNENLIDIETD------------------------------------------------KVI 46 (866)
Q Consensus 16 ~~g~i~~w~~-~~G~~v~~g~~l~~ve~~------------------------------------------------k~~ 46 (866)
.+|.|.+++| ++||.|++||+|+++++. ...
T Consensus 128 ~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~~~~~~~ 207 (413)
T 3ne5_B 128 AAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTR 207 (413)
T ss_dssp SCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCCCE
T ss_pred cCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccc
Confidence 5699999998 999999999999999952 235
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
..|.||++|+|.++.+++|+.|..|++|+.|...
T Consensus 208 ~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~~~ 241 (413)
T 3ne5_B 208 FTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGM 241 (413)
T ss_dssp EEEECSSSEEEEECCCCTTCEECTTSCSEEEEEE
T ss_pred EEEEcCCCeEEEEEEcCCCCEECCCCcEEEEeCC
Confidence 6899999999999999999999999999999743
No 342
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.37 E-value=0.00014 Score=83.05 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=75.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcC---CcEEEEecCCcCC--C-cc----------cHHHHHHHHHHHHHcCCEEEeCce
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLG---SEVTILEMSSNFL--N-TV----------DEEIAKKAFHLLNKQGLNIILNTK 633 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g---~~Vtli~~~~~~l--~-~~----------d~~~~~~l~~~l~~~GV~i~~~~~ 633 (866)
..+++|||+|+.|+.+|..|++.| .+|+++++.+.+. + .+ ..++.....+.+++.|++++.++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 368999999999999999999988 9999999987532 1 00 111111224567788999999999
Q ss_pred EEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 634 IHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 634 v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+..+..+++.+.+.. ++. ..++.+|.+|+|+|.+|....
T Consensus 115 v~~i~~~~~~v~v~~---~g~----~~~~~~d~lviAtG~~p~~p~ 153 (490)
T 2bc0_A 115 VQSIDYDAKTVTALV---DGK----NHVETYDKLIFATGSQPILPP 153 (490)
T ss_dssp EEEEETTTTEEEEEE---TTE----EEEEECSEEEECCCEEECCCS
T ss_pred EEEEECCCCEEEEEe---CCc----EEEEECCEEEECCCCCcCCCC
Confidence 999987666555432 221 237999999999999887653
No 343
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.36 E-value=9.3e-05 Score=84.71 Aligned_cols=56 Identities=7% Similarity=0.176 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHcC-CEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 611 EEIAKKAFHLLNKQG-LNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 611 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
..+.+.+.+.+.+.| +++++++.|++|+.+++++.+... +|. ++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~--~g~------~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTAR--DGR------EFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEET--TCC------EEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEEC--CCC------EEEcCEEEECCCHH
Confidence 467788888888888 999999999999987777766553 554 78999999999964
No 344
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.36 E-value=0.00012 Score=82.21 Aligned_cols=50 Identities=18% Similarity=0.145 Sum_probs=38.2
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPS 443 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~ 443 (866)
+||+|||||++|+++|..|++.|++|+|||+.+.+ ...+|.+...+|...
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~---~~~~g~~~~~~~~~~ 72 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPD---EYSGLRLLNTVAHNA 72 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGG---GSTTSCCCCCCCBCH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChH---hhcccccccchhccc
Confidence 79999999999999999999999999999997321 112344444455443
No 345
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.35 E-value=0.00011 Score=83.60 Aligned_cols=43 Identities=30% Similarity=0.432 Sum_probs=38.9
Q ss_pred cccceeeecCCccHHHHHHHHHHCC-CeEEEEeccCCCcccccCCCccce
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
+++||+|||||++|++||..|++.| .+|+|+|+. +.+||.|..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~------~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECN------DTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESS------SSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCC------CCCCCeeee
Confidence 4589999999999999999999998 799999998 688988754
No 346
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.35 E-value=9.2e-05 Score=84.30 Aligned_cols=42 Identities=24% Similarity=0.424 Sum_probs=37.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccce
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
.+||+|||||++|++||..|++.|++|+|+|+. +.+||.+..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~------~~~GGr~~t 57 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESS------ARLGGAVGT 57 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSS------SSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcC------CCCCceeee
Confidence 589999999999999999999999999999998 788987643
No 347
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.35 E-value=0.00011 Score=83.72 Aligned_cols=42 Identities=17% Similarity=0.293 Sum_probs=37.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCC--CeEEEEeccCCCcccccCCCccce
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG--FKTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g--~~V~liek~~~~~~~~~~GG~~~~ 437 (866)
++||+|||||++|++||.+|++.| ++|+|+|+. +.+||.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~------~~~GG~~~~ 47 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAG------ERLGGKVAT 47 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSS------SSSBTTCCE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECC------CCCCceeEE
Confidence 489999999999999999999999 999999997 678887644
No 348
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.34 E-value=0.0012 Score=78.41 Aligned_cols=53 Identities=17% Similarity=0.362 Sum_probs=41.8
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
..+.+.+++.|++++++++|+++..+++++.+.. .+|. ++.+|.||+|+|...
T Consensus 421 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t--~~G~------~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 421 RNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNF--AGDQ------QATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE--TTSC------EEEESEEEECCGGGG
T ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEE--CCCC------EEECCEEEECCCcch
Confidence 3445566678999999999999998887765544 3555 789999999999764
No 349
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.34 E-value=0.0003 Score=80.55 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=69.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..+++.|.+|+++++.+ .+. |. +
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~----- 221 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD------HVL---------PY---------------------E----- 221 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS------SSS---------CC---------------------S-----
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC------ccc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 211 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.++.+. +.. ....+.+...++.++.+|.||+|+|.+|..
T Consensus 222 d~~--------------~~~~l~~~l~~~GV~i~~~~~V~~i~~---~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 222 DAD--------------AALVLEESFAERGVRLFKNARAASVTR---TGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp SHH--------------HHHHHHHHHHHTTCEEETTCCEEEEEE---CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CHH--------------HHHHHHHHHHHCCCEEEeCCEEEEEEE---eCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 000 01123445778899999886655 322 122356666667789999999999998874
No 350
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.34 E-value=0.00039 Score=79.37 Aligned_cols=99 Identities=10% Similarity=0.028 Sum_probs=69.1
Q ss_pred cceeeecCCccHHHHHHHHHHC---CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
.+++|||||+.|+.+|..|++. |.+|+++++.+ .+. |.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~------~~l---------~~------------------------ 228 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD------MIL---------RG------------------------ 228 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS------SSS---------TT------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC------Ccc---------cc------------------------
Confidence 6799999999999999999999 99999999862 211 00
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
++. .+...+...+++.||+++.+..+. +.. + ....+.+...+|+++.+|.||+|+|.+|..
T Consensus 229 ----~d~------------~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~-~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 229 ----FDS------------ELRKQLTEQLRANGINVRTHENPAKVTK-N-ADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp ----SCH------------HHHHHHHHHHHHTTEEEEETCCEEEEEE-C-TTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred ----cCH------------HHHHHHHHHHHhCCCEEEeCCEEEEEEE-c-CCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 000 011123445778899999987655 322 1 112355555667789999999999998874
No 351
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.33 E-value=0.00081 Score=74.77 Aligned_cols=102 Identities=20% Similarity=0.172 Sum_probs=75.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCc-EEEEecCCcCCCc-----c-----------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSE-VTILEMSSNFLNT-----V----------------------------------- 609 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~-Vtli~~~~~~l~~-----~----------------------------------- 609 (866)
.+|+|||||+.|+-+|..|++.|.+ |+++++.+.+.+. +
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g~ 84 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGA 84 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCCC
Confidence 5799999999999999999999999 9999987653110 0
Q ss_pred ---------------------cHHHHHHHHHHHHH-cC-CEEEeCceEEEEEEcCCeEEEEEee-CCCCccceeEEEecc
Q psy9583 610 ---------------------DEEIAKKAFHLLNK-QG-LNIILNTKIHDIKINKENVLINYSN-KSTNVKTEIITSIFD 665 (866)
Q Consensus 610 ---------------------d~~~~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~~~~D 665 (866)
...+...+.+.+.+ .| ++++++++|++++. ++++.+.+.+ .+|. ..++.+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~----~~~~~ad 159 (410)
T 3c96_A 85 TVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGK----PQALGAD 159 (410)
T ss_dssp EEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSC----EEEEEES
T ss_pred EEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCC----ceEEecC
Confidence 01344555666665 35 68999999999988 6667777753 1242 2478999
Q ss_pred EEEEeeccccCC
Q psy9583 666 KLLIAIGRIPNT 677 (866)
Q Consensus 666 ~vi~a~G~~p~~ 677 (866)
.||.|.|.....
T Consensus 160 ~vV~AdG~~S~v 171 (410)
T 3c96_A 160 VLVGADGIHSAV 171 (410)
T ss_dssp EEEECCCTTCHH
T ss_pred EEEECCCccchh
Confidence 999999986543
No 352
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.33 E-value=0.00037 Score=80.23 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=69.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||..|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~------~~l---------~~---------------------~----- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE------PLK---------LI---------------------K----- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC------TTT---------TC---------------------C-----
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC------ccc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 110 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccE---EEEEcCCce-EEEecEEEEecCCCCc
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHE---IQIINKTKE-TITAKYIIIATGSKAR 545 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~---v~v~~~~g~-~i~~d~lViATGs~p~ 545 (866)
..+ +...+...+++.||+++.+..+. +.. + .... +.+...+|+ ++.+|.||+|+|.+|.
T Consensus 254 ~~~--------------~~~~l~~~l~~~GV~i~~~~~V~~i~~-~-~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 254 DNE--------------TRAYVLDRMKEQGMEIISGSNVTRIEE-D-ANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp SHH--------------HHHHHHHHHHHTTCEEESSCEEEEEEE-C-TTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred cHH--------------HHHHHHHHHHhCCcEEEECCEEEEEEE-c-CCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 000 01123445778899999887665 321 1 1121 556656676 8999999999999886
Q ss_pred C
Q psy9583 546 S 546 (866)
Q Consensus 546 ~ 546 (866)
.
T Consensus 318 ~ 318 (523)
T 1mo9_A 318 S 318 (523)
T ss_dssp C
T ss_pred C
Confidence 4
No 353
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.32 E-value=0.00034 Score=79.24 Aligned_cols=98 Identities=15% Similarity=0.195 Sum_probs=66.3
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~----- 210 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP------RAL---------PN---------------------E----- 210 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSS---------TT---------------------S-----
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC------ccc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 210 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcC-Cc--eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINK-TK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~-~g--~~i~~d~lViATGs~p~~ 546 (866)
..++ ...+...+++.||+++.+..+. +.. ....+.+... ++ .++.+|.||+|+|..|..
T Consensus 211 ~~~~--------------~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 211 DADV--------------SKEIEKQFKKLGVTILTATKVESIAD---GGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp CHHH--------------HHHHHHHHHHHTCEEECSCEEEEEEE---CSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred CHHH--------------HHHHHHHHHHcCCEEEeCcEEEEEEE---cCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 0000 1113345667799999987665 322 1122334321 34 689999999999998864
No 354
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.32 E-value=0.00044 Score=79.02 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=68.8
Q ss_pred cceeeecCCccHHHHHHHHHHC---CCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL---GFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~---g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
.+++|||||+.|+.+|..|++. |.+|++|++.+ .+- |. +
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~------~~l---------~~---------------------~-- 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN------LIL---------RG---------------------F-- 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS------SSC---------TT---------------------S--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC------ccc---------cc---------------------c--
Confidence 6799999999999999999999 99999999862 110 00 0
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.+..+. +.. + ....+.+...+|+++.+|.||+|+|.+|..
T Consensus 234 ---d~~--------------~~~~l~~~l~~~GV~i~~~~~v~~i~~-~-~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 234 ---DET--------------IREEVTKQLTANGIEIMTNENPAKVSL-N-TDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp ---CHH--------------HHHHHHHHHHHTTCEEEESCCEEEEEE-C-TTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ---CHH--------------HHHHHHHHHHhCCCEEEeCCEEEEEEE-c-CCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 000 01123445778899999987655 322 1 112345555667789999999999988764
No 355
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.32 E-value=0.00025 Score=64.22 Aligned_cols=45 Identities=27% Similarity=0.338 Sum_probs=38.5
Q ss_pred EEEEEEEe-CCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEee
Q psy9583 18 ATLLNWHK-KEGELVVRNENLIDIETDKVILELPAPQDGIINKIII 62 (866)
Q Consensus 18 g~i~~w~~-~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~ 62 (866)
|.|+-... ++|++|++||+++.||++|+..+|.||.+|+|.+++-
T Consensus 49 Gdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN~ 94 (137)
T 3tzu_A 49 GDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNT 94 (137)
T ss_dssp CSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEECH
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEehh
Confidence 34444433 8999999999999999999999999999999998853
No 356
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.31 E-value=0.00029 Score=80.26 Aligned_cols=104 Identities=19% Similarity=0.332 Sum_probs=73.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCC--C-ccc----------HHHHHHHHHHHHH-cCCEEEeCceE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFL--N-TVD----------EEIAKKAFHLLNK-QGLNIILNTKI 634 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l--~-~~d----------~~~~~~l~~~l~~-~GV~i~~~~~v 634 (866)
.+++|||+|+.|+.+|..|++. |.+|+++++.+.+. + .++ .++.....+.+.+ .|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999986 88999999987542 1 111 1111122344544 49999999999
Q ss_pred EEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 635 HDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 635 ~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+..+++.+.+... .+|. ..++.+|.+|+|+|.+|....
T Consensus 117 ~~i~~~~~~v~v~~~-~~g~----~~~~~~d~lviAtG~~p~~p~ 156 (480)
T 3cgb_A 117 TKVDTEKKIVYAEHT-KTKD----VFEFSYDRLLIATGVRPVMPE 156 (480)
T ss_dssp EEEETTTTEEEEEET-TTCC----EEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCEEEEEEc-CCCc----eEEEEcCEEEECCCCcccCCC
Confidence 999876665554321 2332 236899999999999887653
No 357
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.29 E-value=0.00054 Score=77.74 Aligned_cols=100 Identities=14% Similarity=0.212 Sum_probs=67.0
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~------~~l---------~~---------------------~----- 216 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS------EIV---------PT---------------------M----- 216 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS------SSS---------TT---------------------S-----
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC------ccc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 211 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcC-C--ceEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINK-T--KETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~-~--g~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.++.+. +.. +.....+.+... + +.++.+|.||+|+|..|..
T Consensus 217 ~~~--------------~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 217 DAE--------------IRKQFQRSLEKQGMKFKLKTKVVGVDT-SGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp CHH--------------HHHHHHHHHHHSSCCEECSEEEEEEEC-SSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred cHH--------------HHHHHHHHHHHcCCEEEeCCEEEEEEE-cCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 000 01113445778899999987766 322 111122333321 2 3689999999999998863
No 358
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.27 E-value=0.0014 Score=72.61 Aligned_cols=54 Identities=20% Similarity=0.146 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+...+.+.+++.|++++++++|+++..+++.+ .+.. .+| ++.+|.||+|+|...
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~--~~g-------~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKT--TRG-------TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE--TTC-------CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEe--CCc-------eEECCEEEECCchhH
Confidence 44456667788899999999999998876553 3433 233 588999999999754
No 359
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.27 E-value=0.00084 Score=76.27 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=68.0
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||+|+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~---- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD------KFL---------PA---------------------V---- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS------SSS---------TT---------------------S----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC------CcC---------cc---------------------c----
Confidence 3679999999999999999999999999999862 211 00 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCc-eEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK-ETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g-~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.+..+. +.. +.....+.+.+.++ ..+.+|.||+|+|..|..
T Consensus 220 -~~~--------------~~~~l~~~l~~~Gv~v~~~~~v~~i~~-~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 220 -DEQ--------------VAKEAQKILTKQGLKILLGARVTGTEV-KNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp -CHH--------------HHHHHHHHHHHTTEEEEETCEEEEEEE-CSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred -CHH--------------HHHHHHHHHHhCCCEEEECCEEEEEEE-cCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 000 11123445778899999886655 322 11222344443334 679999999999988864
No 360
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=97.26 E-value=0.0003 Score=76.78 Aligned_cols=65 Identities=15% Similarity=0.296 Sum_probs=58.5
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecce--------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDKV-------------------------------------------------- 45 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k~-------------------------------------------------- 45 (866)
..|+|.++++++||.|++||+|+++++...
T Consensus 64 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a 143 (359)
T 3lnn_A 64 LAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAAS 143 (359)
T ss_dssp SCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999987531
Q ss_pred --------------------------eeEEecCCCeEEEEEeecCCCEEec-CCEEEEEecC
Q psy9583 46 --------------------------ILELPAPQDGIINKIIITDGSIVTS-NQVIALIDTD 80 (866)
Q Consensus 46 --------------------------~~~i~~~~~G~~~~~~~~~g~~v~~-g~~l~~~~~~ 80 (866)
...|.||++|+|.++.+.+|+.|.. |++|+.+...
T Consensus 144 ~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~~~ 205 (359)
T 3lnn_A 144 ESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVADL 205 (359)
T ss_dssp HHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEECC
T ss_pred HHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEecC
Confidence 3579999999999999999999999 9999999754
No 361
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=97.26 E-value=9.6e-05 Score=77.58 Aligned_cols=65 Identities=22% Similarity=0.343 Sum_probs=57.4
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecc---------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDK--------------------------------------------------- 44 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k--------------------------------------------------- 44 (866)
..|+|.+++|++||.|++||+|+++++..
T Consensus 29 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~ 108 (277)
T 2f1m_A 29 VSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQ 108 (277)
T ss_dssp SCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 46999999999999999999999998741
Q ss_pred --------------------eeeEEecCCCeEEEEEeecCCCEEecC--CEEEEEecC
Q psy9583 45 --------------------VILELPAPQDGIINKIIITDGSIVTSN--QVIALIDTD 80 (866)
Q Consensus 45 --------------------~~~~i~~~~~G~~~~~~~~~g~~v~~g--~~l~~~~~~ 80 (866)
....|.||++|+|.++.+++|+.|..| ++|+.|...
T Consensus 109 ~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~~ 166 (277)
T 2f1m_A 109 QANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQL 166 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEecC
Confidence 124799999999999999999999999 689998754
No 362
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.26 E-value=0.0011 Score=76.89 Aligned_cols=97 Identities=16% Similarity=0.212 Sum_probs=72.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-CC-----C------------------c------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-FL-----N------------------T------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-~l-----~------------------~------------------ 608 (866)
-.|+|||||..|+++|..+++.|.+|.++++.+. +. + .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999998631 10 0 0
Q ss_pred ------------cc-HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeE-EEEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 609 ------------VD-EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENV-LINYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 609 ------------~d-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
.| ..+...+.+.+++ .|++++ +..|+.+..+++.+ .+.+ .+|. .+.+|.||+|+|.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t--~dG~------~I~Ad~VVLATGt 179 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVT--QMGL------KFRAKAVVLTVGT 179 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEE--TTSE------EEEEEEEEECCST
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEE--CCCC------EEECCEEEEcCCC
Confidence 01 1345566677777 699994 67899998766654 3433 2554 7999999999998
Q ss_pred ccC
Q psy9583 674 IPN 676 (866)
Q Consensus 674 ~p~ 676 (866)
.+.
T Consensus 180 ~s~ 182 (651)
T 3ces_A 180 FLD 182 (651)
T ss_dssp TTC
T ss_pred Ccc
Confidence 654
No 363
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.26 E-value=0.0008 Score=76.29 Aligned_cols=100 Identities=18% Similarity=0.321 Sum_probs=65.8
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. +
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~----- 213 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP------RCA---------PT---------------------L----- 213 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSS---------TT---------------------S-----
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC------ccc---------cc---------------------C-----
Confidence 679999999999999999999999999999862 211 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHH-HhCCcEEEEeEEEE-eccccCcccEEEEEcCCc--eEEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLF-KKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTK--ETITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g--~~i~~d~lViATGs~p~~ 546 (866)
+.+ +...+...+ ++.||+++.+..+. +.. +.....+.+...+| .++.+|.||+|+|..|..
T Consensus 214 d~~--------------~~~~l~~~l~~~~gv~i~~~~~v~~i~~-~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 214 DED--------------VTNALVGALAKNEKMKFMTSTKVVGGTN-NGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp CHH--------------HHHHHHHHHHHHTCCEEECSCEEEEEEE-CSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred CHH--------------HHHHHHHHHhhcCCcEEEeCCEEEEEEE-cCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 000 011234456 78899999986665 322 11112233322244 679999999999998864
No 364
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.23 E-value=0.00088 Score=76.41 Aligned_cols=98 Identities=20% Similarity=0.224 Sum_probs=65.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+++++.+ .+....
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~------~~l~~~---------------------------------- 213 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG------SVANLQ---------------------------------- 213 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT------CCTTCC----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC------cccccC----------------------------------
Confidence 3679999999999999999999999999999862 221000
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc--CCc--eEEEecEEEEecCCCC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN--KTK--ETITAKYIIIATGSKA 544 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~--~~g--~~i~~d~lViATGs~p 544 (866)
..++ ...+...+++. |+++.+..+. +.. ....+.+.. .+| .++.+|.||+|+|..|
T Consensus 214 -d~~~--------------~~~l~~~l~~~-V~i~~~~~v~~i~~---~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 214 -DEEM--------------KRYAEKTFNEE-FYFDAKARVISTIE---KEDAVEVIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp -CHHH--------------HHHHHHHHHTT-SEEETTCEEEEEEE---CSSSEEEEEECTTCCEEEEEESEEEECSCCEE
T ss_pred -CHHH--------------HHHHHHHHhhC-cEEEECCEEEEEEE---cCCEEEEEEEeCCCceEEEECCEEEEeeCCcc
Confidence 0000 11123345556 8888876655 221 112333433 245 6899999999999988
Q ss_pred cC
Q psy9583 545 RS 546 (866)
Q Consensus 545 ~~ 546 (866)
..
T Consensus 275 ~~ 276 (492)
T 3ic9_A 275 NV 276 (492)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 365
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.22 E-value=0.0018 Score=74.86 Aligned_cols=98 Identities=15% Similarity=0.272 Sum_probs=72.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc-CC-----C------------------c------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN-FL-----N------------------T------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~-~l-----~------------------~------------------ 608 (866)
-.|+|||||..|+++|..+++.|.+|.++++... +. + .
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999998631 10 0 0
Q ss_pred ------------cc-HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 609 ------------VD-EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 609 ------------~d-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
.| ..+...+.+.+++ .|++++ +..|+++..+++.+. +.+ .+|. .+.+|.||+|+|.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t--~dG~------~i~AdaVVLATG~ 178 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRT--NLGV------EYKTKAVVVTTGT 178 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEE--TTSC------EEECSEEEECCTT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEE--CCCc------EEEeCEEEEccCC
Confidence 00 1345556677777 599995 678999887766553 443 3565 7999999999998
Q ss_pred ccCC
Q psy9583 674 IPNT 677 (866)
Q Consensus 674 ~p~~ 677 (866)
.++.
T Consensus 179 ~s~~ 182 (637)
T 2zxi_A 179 FLNG 182 (637)
T ss_dssp CBTC
T ss_pred CccC
Confidence 6654
No 366
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.21 E-value=0.00016 Score=82.77 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=39.0
Q ss_pred cccccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccc
Q psy9583 387 MNKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCT 436 (866)
Q Consensus 387 m~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~ 436 (866)
+...+||+|||||++|++||..|++.|++|+|+|+. +.+||.+.
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~------~~~gg~~~ 73 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS------ERPGGRVR 73 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS------SSSBTTCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC------CCCCCcee
Confidence 334689999999999999999999999999999998 68888763
No 367
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.20 E-value=0.00063 Score=77.11 Aligned_cols=100 Identities=13% Similarity=0.116 Sum_probs=69.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------------------------------ccH--------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-------------------------------VDE-------- 611 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-------------------------------~d~-------- 611 (866)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++.
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 36999999999999999999999999999977654211 000
Q ss_pred H---HH--HHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 612 E---IA--KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 612 ~---~~--~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
. +. ..+.+.+++.|++++.+ .+..+. .+.+.+.. .+|. ..++.+|.+++|+|.+|....
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~~~~~V~~--~~g~----~~~~~~d~lviAtG~~p~~p~ 148 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--PTHVIVKT--DEGK----EIEAETRYMIIASGAETAKLR 148 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--TTEEEEEE--TTSC----EEEEEEEEEEECCCEEECCCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEec--CCeEEEEc--CCCc----EEEEecCEEEECCCCCccCCC
Confidence 0 01 33444556679999877 565554 34444444 3554 123999999999999887654
No 368
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.20 E-value=0.001 Score=75.90 Aligned_cols=101 Identities=23% Similarity=0.286 Sum_probs=67.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+++++.+ .+... .
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~~l~~------~---------------------------- 237 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD------TILGG------M---------------------------- 237 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS------SSSSS------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc------ccccc------C----------------------------
Confidence 3679999999999999999999999999999862 21100 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCc--eEEEecEEEEecCCCCc
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTK--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g--~~i~~d~lViATGs~p~ 545 (866)
.. .+...+...+++.||+++.+..+. +.. +.....+.+.. .+| .++.+|.||+|+|..|.
T Consensus 238 -d~--------------~~~~~l~~~l~~~gV~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 238 -DG--------------EVAKQLQRMLTKQGIDFKLGAKVTGAVK-SGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp -CH--------------HHHHHHHHHHHHTTCEEECSEEEEEEEE-ETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred -CH--------------HHHHHHHHHHHhCCCEEEECCeEEEEEE-eCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 00 001123445777899999887665 322 11122344432 113 68999999999998876
Q ss_pred C
Q psy9583 546 S 546 (866)
Q Consensus 546 ~ 546 (866)
.
T Consensus 302 ~ 302 (491)
T 3urh_A 302 T 302 (491)
T ss_dssp C
T ss_pred C
Confidence 4
No 369
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=97.18 E-value=0.00034 Score=75.73 Aligned_cols=65 Identities=20% Similarity=0.233 Sum_probs=56.8
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecc---------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDK--------------------------------------------------- 44 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k--------------------------------------------------- 44 (866)
..|+|.+++|++||.|++||+|+++++..
T Consensus 38 ~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 117 (341)
T 3fpp_A 38 VSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLD 117 (341)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHH
T ss_pred CCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHH
Confidence 46999999999999999999999998741
Q ss_pred ----------------------------------eeeEEecCCCeEEEEEeecCCCEEecCCE---EEEEecC
Q psy9583 45 ----------------------------------VILELPAPQDGIINKIIITDGSIVTSNQV---IALIDTD 80 (866)
Q Consensus 45 ----------------------------------~~~~i~~~~~G~~~~~~~~~g~~v~~g~~---l~~~~~~ 80 (866)
....|.||++|+|.++.+.+|+.|..|++ |+.+...
T Consensus 118 ~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~~ 190 (341)
T 3fpp_A 118 NAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADM 190 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEEecC
Confidence 01459999999999999999999999987 8888643
No 370
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.18 E-value=0.00053 Score=78.14 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=68.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||+|+.|+..|..+++.|.+|+++++.+ .+. |. +
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~------~~l---------~~---------------------~---- 230 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD------LIL---------RN---------------------F---- 230 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSS---------TT---------------------S----
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC------ccc---------cc---------------------c----
Confidence 3689999999999999999999999999999862 110 00 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
.. .+...+...+++.||+++.+..+. +.. ....+.+...+++++.+|.||+|+|..|..
T Consensus 231 -~~--------------~~~~~l~~~l~~~Gv~i~~~~~V~~i~~---~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 231 -DY--------------DLRQLLNDAMVAKGISIIYEATVSQVQS---TENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp -CH--------------HHHHHHHHHHHHHTCEEESSCCEEEEEE---CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred -CH--------------HHHHHHHHHHHHCCCEEEeCCEEEEEEe---eCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 00 001113345667799999876555 322 223355666677889999999999988764
No 371
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.18 E-value=0.00064 Score=77.04 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=67.1
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||||+.|+.+|..|++.|.+|+++++.+ .+- | .
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~~l---------~----------------------~---- 214 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNT------LFF---------R----------------------E---- 214 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC------TTT---------T----------------------S----
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC------ccC---------C----------------------C----
Confidence 3689999999999999999999999999999862 110 0 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p~~ 546 (866)
+ . .+...+...+++.||+++.+..+. +.. ....+.+..+ +.++.+|.||+|+|.+|..
T Consensus 215 ---~-~-----------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 ---D-P-----------AIGEAVTAAFRAEGIEVLEHTQASQVAH---MDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp ---C-H-----------HHHHHHHHHHHHTTCEEETTCCEEEEEE---ETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred ---C-H-----------HHHHHHHHHHHhCCCEEEcCCEEEEEEE---eCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 0 0 011123445777899999876554 322 2233445444 4579999999999998763
No 372
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.15 E-value=0.00031 Score=80.27 Aligned_cols=108 Identities=22% Similarity=0.246 Sum_probs=71.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC--Cc--------ccH-HHHHHHHHHH--HHcCCEEEeCceEEEE
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL--NT--------VDE-EIAKKAFHLL--NKQGLNIILNTKIHDI 637 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l--~~--------~d~-~~~~~l~~~l--~~~GV~i~~~~~v~~i 637 (866)
++|+|||||+.|+.+|..|.+.+.+|++|++++.+. |. +++ ++...+.+.+ .+.+++++. ..+++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~-~~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYE-AEATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEE-EEEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEE-EEEEEE
Confidence 589999999999999999999999999999987542 11 111 1111222322 234677775 467888
Q ss_pred EEcCCeEEEEEeeC----------CCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 638 KINKENVLINYSNK----------STNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 638 ~~~~~~~~v~~~~~----------~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..+...+.+..... .+....+..++.+|.+|+|+|.+|+...
T Consensus 122 D~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ 173 (502)
T 4g6h_A 122 NPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG 173 (502)
T ss_dssp EGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT
T ss_pred EhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC
Confidence 77666655432110 0111123458999999999999998754
No 373
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.15 E-value=0.00048 Score=78.66 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=74.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC----------cc---cHHHHHHHHHHHHHcCCEEEeCceEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN----------TV---DEEIAKKAFHLLNKQGLNIILNTKIHD 636 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~----------~~---d~~~~~~l~~~l~~~GV~i~~~~~v~~ 636 (866)
..+|+|||+|+.|+.+|..|++. .+|+++++.+.+.. .+ ..++...+.+.+ +.|+++++++.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~ 185 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALG 185 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEE
Confidence 35799999999999999999999 99999999876521 11 223334444444 56999999999988
Q ss_pred EEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+..++..+.+.... ++. ...+.+|.+++|+|..|....
T Consensus 186 i~~~~~~~~~~~~~-~~~----~~~~~~d~lvlAtGa~~~~~~ 223 (493)
T 1y56_A 186 VFDKGEYFLVPVVR-GDK----LIEILAKRVVLATGAIDSTML 223 (493)
T ss_dssp CEECSSSEEEEEEE-TTE----EEEEEESCEEECCCEEECCCC
T ss_pred EEcCCcEEEEEEec-CCe----EEEEECCEEEECCCCCccCCC
Confidence 88766555443321 332 236899999999999887643
No 374
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.15 E-value=0.00084 Score=76.60 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=67.5
Q ss_pred ccceeeecCCccHHHHHHHHHH----CCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ----LGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGI 465 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~----~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi 465 (866)
..+|+|||||+.|+.+|..|++ .|.+|+++++.+ .+-+. .+|.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~------~~~~~-----~l~~---------------------- 226 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK------GNMGK-----ILPE---------------------- 226 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS------STTTT-----TSCH----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc------ccccc-----cCCH----------------------
Confidence 3689999999999999999887 478999998751 11000 0000
Q ss_pred cccccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCCceEEEecEEEEecCCCC
Q psy9583 466 NTQNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKTKETITAKYIIIATGSKA 544 (866)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~g~~i~~d~lViATGs~p 544 (866)
.+...+...+++.||+++.+..+. +.. ....+.+...+|+++.+|.||+|+|..|
T Consensus 227 ---------------------~~~~~~~~~l~~~GV~v~~~~~V~~i~~---~~~~~~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 227 ---------------------YLSNWTMEKVRREGVKVMPNAIVQSVGV---SSGKLLIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp ---------------------HHHHHHHHHHHTTTCEEECSCCEEEEEE---ETTEEEEEETTSCEEEESEEEECCCEEE
T ss_pred ---------------------HHHHHHHHHHHhcCCEEEeCCEEEEEEe---cCCeEEEEECCCCEEECCEEEECCCCCc
Confidence 001112345778899999886554 321 1234456556778899999999999887
Q ss_pred cC
Q psy9583 545 RS 546 (866)
Q Consensus 545 ~~ 546 (866)
..
T Consensus 283 n~ 284 (493)
T 1m6i_A 283 NV 284 (493)
T ss_dssp CC
T ss_pred cH
Confidence 63
No 375
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.13 E-value=0.0038 Score=68.91 Aligned_cols=50 Identities=16% Similarity=0.245 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
.+.+.+++.|++++++++|+++..+++++.+.. .++ ++.+|.||+|+|..
T Consensus 158 ~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t--~~g-------~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 158 ALFTLAQAAGATLRAGETVTELVPDADGVSVTT--DRG-------TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE--SSC-------EEEEEEEEECCGGG
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEE--CCC-------EEEcCEEEEcCCcC
Confidence 344556678999999999999998777765533 233 68999999999975
No 376
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.12 E-value=0.0018 Score=70.88 Aligned_cols=51 Identities=10% Similarity=0.058 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
..+.+.+++.|++++++++|+++..+++++.+.. .+| ++.+|.||+|+|..
T Consensus 158 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t--~~g-------~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 158 QGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRC--DAG-------SYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHHTTCEEESSCCCCEEEEETTEEEEEC--SSE-------EEEESEEEECCGGG
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEe--CCC-------EEEcCEEEECCChh
Confidence 3455666778999999999999998877755443 233 68999999999964
No 377
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.09 E-value=0.0013 Score=74.82 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=66.9
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.+ .+. |. .
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~~l---------~~---------------------~----- 226 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD------KVL---------RS---------------------F----- 226 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSC---------TT---------------------S-----
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC------ccc---------cc---------------------c-----
Confidence 679999999999999999999999999999862 210 00 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCC-------ceEEEecEEEEecCC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKT-------KETITAKYIIIATGS 542 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~-------g~~i~~d~lViATGs 542 (866)
..++ ...+...+++.||+++.+..+. +.. +.+...+.+...+ +..+.+|.||+|+|.
T Consensus 227 d~~~--------------~~~~~~~l~~~gv~i~~~~~v~~i~~-~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 227 DSMI--------------STNCTEELENAGVEVLKFSQVKEVKK-TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp CHHH--------------HHHHHHHHHHTTCEEETTEEEEEEEE-CSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred CHHH--------------HHHHHHHHHHCCCEEEeCCEEEEEEE-cCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 0000 1123445778899999887665 321 1111134444332 267999999999998
Q ss_pred CCcC
Q psy9583 543 KARS 546 (866)
Q Consensus 543 ~p~~ 546 (866)
.|..
T Consensus 292 ~p~~ 295 (478)
T 3dk9_A 292 VPNT 295 (478)
T ss_dssp EESC
T ss_pred ccCC
Confidence 8764
No 378
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.09 E-value=0.00027 Score=80.29 Aligned_cols=43 Identities=30% Similarity=0.430 Sum_probs=37.3
Q ss_pred cccceeeecCCccHHHHHHHHHHCCC-eEEEEeccCCCcccccCCCccce
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGF-KTACIDEWKDNEENFALGGTCTN 437 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~-~V~liek~~~~~~~~~~GG~~~~ 437 (866)
+.+||+|||||++|+++|..|++.|+ +|+|+|+. +.+||.|..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~------~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEAT------DHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSS------SSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCC------CCCCCceee
Confidence 35899999999999999999999998 89999998 678887743
No 379
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.09 E-value=0.0021 Score=73.81 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=30.0
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 56999999999999999999999999999874
No 380
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.06 E-value=0.0023 Score=72.85 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=65.7
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++. ..+.. +
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~------~~l~~-------------------------------~----- 223 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRS------IPLRG-------------------------------F----- 223 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS------CSSTT-------------------------------S-----
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcC------ccccc-------------------------------C-----
Confidence 57999999999999999999999999999875 11100 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEc-CCce--EEEecEEEEecCCCCcC
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIIN-KTKE--TITAKYIIIATGSKARS 546 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~-~~g~--~i~~d~lViATGs~p~~ 546 (866)
+.+ +...+...+++.||+++.+..+. +...+.....+.+.. .+++ ++.+|.||+|+|..|..
T Consensus 224 d~~--------------~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 224 DQQ--------------MSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp CHH--------------HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESC
T ss_pred CHH--------------HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCccc
Confidence 000 11123445778899999987655 321111112344433 2243 58999999999988763
No 381
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.06 E-value=0.00078 Score=61.97 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=35.0
Q ss_pred CCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEee
Q psy9583 26 KEGELVVRNENLIDIETDKVILELPAPQDGIINKIII 62 (866)
Q Consensus 26 ~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~ 62 (866)
++|+.|++||+++.||+.|+..+|.||.+|+|.+++-
T Consensus 68 ~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN~ 104 (155)
T 3hgb_A 68 VIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNS 104 (155)
T ss_dssp CTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECT
T ss_pred CCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEhh
Confidence 7999999999999999999999999999999987753
No 382
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.05 E-value=0.00049 Score=77.70 Aligned_cols=89 Identities=10% Similarity=0.212 Sum_probs=68.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcC--CcEEEEecCCcCC--------Cc--ccHHHHHHHHHHHHHcCCEEEeCceEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLG--SEVTILEMSSNFL--------NT--VDEEIAKKAFHLLNKQGLNIILNTKIHDI 637 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g--~~Vtli~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~v~~i 637 (866)
+++++|||+|+.|+.+|..|.+.| .+|+++++.+.+. +. ...++...+.+.+++.|++++.++.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-- 83 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG-- 83 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT--
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe--
Confidence 578999999999999999999998 8999999987764 22 234566777888888999999987662
Q ss_pred EEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 638 KINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 638 ~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
.. +.+. + ..+.+|.||+|||..|
T Consensus 84 ----~~--V~~~--~-------~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ----RD--VTVQ--E-------LQDAYHAVVLSYGAED 106 (460)
T ss_dssp ----TT--BCHH--H-------HHHHSSEEEECCCCCE
T ss_pred ----eE--EEec--c-------ceEEcCEEEEecCcCC
Confidence 11 2121 1 1467999999999885
No 383
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.04 E-value=0.0011 Score=78.68 Aligned_cols=87 Identities=24% Similarity=0.363 Sum_probs=68.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc---------c--cHHHHHHHHHHHHHcCCEEEeCceEEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT---------V--DEEIAKKAFHLLNKQGLNIILNTKIHDIK 638 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~---------~--d~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 638 (866)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... . ..+....+.+.+++.||++++++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 578999999999999999999999999999998765211 1 124455667778889999998876521
Q ss_pred EcCCeEEEEEeeCCCCccceeEEE-eccEEEEeeccccCCCC
Q psy9583 639 INKENVLINYSNKSTNVKTEIITS-IFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 639 ~~~~~~~v~~~~~~g~~~~~~~~~-~~D~vi~a~G~~p~~~~ 679 (866)
. .+ .+|.+|+|||.+|....
T Consensus 451 ---------------~------~~~~~d~lviAtG~~p~~~~ 471 (671)
T 1ps9_A 451 ---------------D------QLQAFDETILASGIVPRTPP 471 (671)
T ss_dssp ---------------S------SSCCSSEEEECCCEEECCCC
T ss_pred ---------------H------HhhcCCEEEEccCCCcCCCC
Confidence 0 23 78999999999987654
No 384
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.04 E-value=0.0013 Score=74.43 Aligned_cols=99 Identities=17% Similarity=0.164 Sum_probs=68.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccccc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQN 469 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~ 469 (866)
..+++|||+|+.|+..|..+++.|.+|+++++.+ .+. |. +
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~------~~l---------~~---------------------~---- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK------EIL---------SR---------------------F---- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS------SSS---------TT---------------------S----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC------ccc---------cc---------------------c----
Confidence 3679999999999999999999999999999862 110 00 0
Q ss_pred cccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEE-cCCceEEEecEEEEecCCCCcC
Q psy9583 470 VTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQII-NKTKETITAKYIIIATGSKARS 546 (866)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~-~~~g~~i~~d~lViATGs~p~~ 546 (866)
..+ +...+...+++.||+++.+..+. +.. .....+.+. .++|+ +.+|.||+|+|..|..
T Consensus 210 -~~~--------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 210 -DQD--------------MRRGLHAAMEEKGIRILCEDIIQSVSA--DADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp -CHH--------------HHHHHHHHHHHTTCEEECSCCEEEEEE--CTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred -CHH--------------HHHHHHHHHHHCCCEEECCCEEEEEEE--cCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 000 01123445778899999876555 322 112335666 66777 9999999999988764
No 385
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.02 E-value=0.0026 Score=72.33 Aligned_cols=99 Identities=17% Similarity=0.168 Sum_probs=65.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCcccccc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINTQNV 470 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 470 (866)
.+++|||||+.|+.+|..|++.|.+|+++++. ..+.+ .
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~------~~l~~-------~----------------------------- 225 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS------IVLRG-------F----------------------------- 225 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS------CSSTT-------S-----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC------CCCcc-------c-----------------------------
Confidence 57999999999999999999999999999874 11100 0
Q ss_pred ccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEEcCC-c--eEEEecEEEEecCCCCc
Q psy9583 471 TLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQIINKT-K--ETITAKYIIIATGSKAR 545 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~~~~-g--~~i~~d~lViATGs~p~ 545 (866)
..+ +...+...+++.||+++.+..+. +...+.....+.+.... + .++.+|.||+|+|..|.
T Consensus 226 d~~--------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 226 DQQ--------------MAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp CHH--------------HHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred CHH--------------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 000 11123445778899999987665 32111111223333221 2 47999999999998876
No 386
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.99 E-value=0.0003 Score=76.48 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=30.4
Q ss_pred cceeeecCCccHHHHHHHHHHCC------CeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLG------FKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g------~~V~liek~ 422 (866)
+||+|||||++|+++|++|++.| .+|+|+|+.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~ 38 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADR 38 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECC
Confidence 48999999999999999999998 999999997
No 387
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.97 E-value=0.0039 Score=72.59 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=76.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhc------CCcEEEEecCCcCCCc------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL------GSEVTILEMSSNFLNT------------------------------------ 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~------g~~Vtli~~~~~~l~~------------------------------------ 608 (866)
-+|+|||||+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999999 9999999986542100
Q ss_pred ---------c---c--------------HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCC-eEE-EEEee----CCCCcc
Q psy9583 609 ---------V---D--------------EEIAKKAFHLLNKQGLNIILNTKIHDIKINKE-NVL-INYSN----KSTNVK 656 (866)
Q Consensus 609 ---------~---d--------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-v~~~~----~~g~~~ 656 (866)
+ + ..+...+.+.+++.|+++++++.++++..+++ .+. +.+.+ .+|...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 0 14556677778888999999999999987654 343 55432 133200
Q ss_pred ---ceeEEEeccEEEEeeccccC
Q psy9583 657 ---TEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 657 ---~~~~~~~~D~vi~a~G~~p~ 676 (866)
.+..++.+|.||.|.|....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCceEEECCEEEEeeCCCch
Confidence 00137999999999998764
No 388
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.97 E-value=0.004 Score=68.76 Aligned_cols=97 Identities=24% Similarity=0.223 Sum_probs=69.3
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCc-------ccHHHH------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNT-------VDEEIA------------------------------ 614 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~-------~d~~~~------------------------------ 614 (866)
+|+|||||+.|+-+|..|++.|.+|+++++.+.+... +.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999987654210 111111
Q ss_pred -----------------------------HHHHHHHHH-cCCEEEeCceEEEEEEcCC-eEEEEEeeCCCCccceeEEEe
Q psy9583 615 -----------------------------KKAFHLLNK-QGLNIILNTKIHDIKINKE-NVLINYSNKSTNVKTEIITSI 663 (866)
Q Consensus 615 -----------------------------~~l~~~l~~-~GV~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~~~~~ 663 (866)
..+.+.|.+ .+..+++++++++++..++ .+.+.+. +|. ++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~--dG~------~~~ 154 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFA--DGS------HEN 154 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEET--TSC------EEE
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEEC--CCC------EEE
Confidence 112222222 2346788999999987554 5666665 776 889
Q ss_pred ccEEEEeeccccC
Q psy9583 664 FDKLLIAIGRIPN 676 (866)
Q Consensus 664 ~D~vi~a~G~~p~ 676 (866)
+|+||-|-|....
T Consensus 155 adlvVgADG~~S~ 167 (412)
T 4hb9_A 155 VDVLVGADGSNSK 167 (412)
T ss_dssp ESEEEECCCTTCH
T ss_pred eeEEEECCCCCcc
Confidence 9999999997653
No 389
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.95 E-value=0.0061 Score=69.56 Aligned_cols=59 Identities=8% Similarity=0.106 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEee-CCCCccceeEEEeccEEEEeecccc
Q psy9583 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSN-KSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+...+.+.+.+.|++++.+++|+++..+++.+.+.+.+ .+|. ..++.+|.||.|+|...
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~----~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGK----KYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCC----EEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCC----EEEEECCEEEECCChhH
Confidence 34456667778899999999999998876655566543 2342 34789999999999654
No 390
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.94 E-value=0.0045 Score=73.68 Aligned_cols=53 Identities=9% Similarity=0.219 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 616 KAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 616 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
.+.+.+++.|++++++++|+++..+++++.+... +|. .++.+|.||+|+|...
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~--~G~-----~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFG--QSQ-----AAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC---CC-----CCEEESEEEECCGGGT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeC--CCc-----EEEECCEEEECCCcch
Confidence 3445566789999999999999988777665543 331 1578999999999764
No 391
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.91 E-value=0.0048 Score=71.13 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
..+.+.+++.|++++.+ +|+++..++++..+.+...+|. ++.+|.||.|+|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~------~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGR------TLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSC------EECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCc------EEEeCEEEECCCCchhh
Confidence 34455666789999999 8999987654422223333564 79999999999987654
No 392
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.91 E-value=0.00052 Score=75.57 Aligned_cols=33 Identities=30% Similarity=0.540 Sum_probs=31.0
Q ss_pred cceeeecCCccHHHHHHHHHHC--CCeEEEEeccC
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQL--GFKTACIDEWK 423 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~--g~~V~liek~~ 423 (866)
+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 4799999999999999999999 99999999974
No 393
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.89 E-value=0.0037 Score=73.20 Aligned_cols=32 Identities=25% Similarity=0.115 Sum_probs=30.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+++|||||+.|+.+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999974
No 394
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.87 E-value=0.0045 Score=76.39 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC---c-----c----cHHHHHHHHHHHHHc-CCEEEeCceEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN---T-----V----DEEIAKKAFHLLNKQ-GLNIILNTKIHD 636 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~---~-----~----d~~~~~~l~~~l~~~-GV~i~~~~~v~~ 636 (866)
..+|+|||+|+.|+.+|..+++.|.+|+++++.+.+.. . + ..+....+.+.+.+. +++++.++.+..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 35799999999999999999999999999998765421 0 1 234455566667774 999999999988
Q ss_pred EEEcCCeEEEEEeeCCCCc-------cceeEEEeccEEEEeeccccCCCC
Q psy9583 637 IKINKENVLINYSNKSTNV-------KTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 637 i~~~~~~~~v~~~~~~g~~-------~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
+...+....+......-.. ..+...+.+|.+|+|||..|....
T Consensus 208 i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ 257 (965)
T 2gag_A 208 SYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIV 257 (965)
T ss_dssp EETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCC
T ss_pred eecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCC
Confidence 8643321111111000000 011247899999999999886543
No 395
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.86 E-value=0.0076 Score=67.39 Aligned_cols=55 Identities=9% Similarity=0.138 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcCCEEEeCc---eEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 613 IAKKAFHLLNKQGLNIILNT---KIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~---~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+...+.+.+++.|++|++++ +|+++..+++.+. +.+. +|. ++.+|.||+|+|...
T Consensus 163 ~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~--~G~------~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 163 ALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTA--DGK------IWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEET--TTE------EEECSEEEECCGGGG
T ss_pred HHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEEC--CCC------EEECCEEEECCCCCh
Confidence 34455566777899999999 9999988777765 5543 564 799999999999754
No 396
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.85 E-value=0.0091 Score=63.77 Aligned_cols=166 Identities=14% Similarity=0.178 Sum_probs=100.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCCC--------------------------------------ccc
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFLN--------------------------------------TVD 610 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l~--------------------------------------~~d 610 (866)
..|+|||+|+.|+-+|..|++. |.+|+++++.+.+.. ...
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 4799999999999999999997 999999998764320 002
Q ss_pred HHHHHHHHHHHHH-cCCEEEeCceEEEEEEcCC-------------------eEE-EEEe----eCCCC--ccceeEEEe
Q psy9583 611 EEIAKKAFHLLNK-QGLNIILNTKIHDIKINKE-------------------NVL-INYS----NKSTN--VKTEIITSI 663 (866)
Q Consensus 611 ~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~-------------------~~~-v~~~----~~~g~--~~~~~~~~~ 663 (866)
.++.+.+.+.+.+ .|++++.++.++++..+++ .+. +.+. ..++. ...+..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 3445666667777 5999999999998876542 221 1111 11221 111345899
Q ss_pred ccEEEEeeccccCCCCCC---ccccCee--ecCCCcEEeC-------CCCCCCCCCEEEecccCC--------CCCcHHH
Q psy9583 664 FDKLLIAIGRIPNTNNLN---IDKIGLK--VNENNFIIVN-------DNCETNIPNIYAIGDVVR--------GPMLAHK 723 (866)
Q Consensus 664 ~D~vi~a~G~~p~~~~l~---l~~~gl~--~~~~G~i~Vd-------~~l~Ts~~~VyA~GD~a~--------~~~~~~~ 723 (866)
++.||.|+|......-.. +...++. +...+..+.+ ++-+--+||+|++|=.+. +|-+. .
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg-~ 318 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEIDGANRMGPTFG-A 318 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHHTCEECCSCCH-H
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhcCCCCCCcccc-e
Confidence 999999999876532110 1122221 1101112111 011113699999998763 33222 3
Q ss_pred HHHHHHHHHHHHhC
Q psy9583 724 AEEEGIMVAEHISG 737 (866)
Q Consensus 724 A~~~g~~aa~~i~g 737 (866)
=+..|+.||+.|+.
T Consensus 319 m~~sg~~~a~~~~~ 332 (344)
T 3jsk_A 319 MALSGVKAAHEAIR 332 (344)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHH
Confidence 34678888887763
No 397
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=96.84 E-value=0.00043 Score=75.82 Aligned_cols=65 Identities=23% Similarity=0.350 Sum_probs=57.1
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecc---------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDK--------------------------------------------------- 44 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k--------------------------------------------------- 44 (866)
..|+|.++++++||.|++||+|+++++..
T Consensus 50 v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~ 129 (369)
T 1vf7_A 50 VNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVE 129 (369)
T ss_dssp SCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999998632
Q ss_pred ------eeeEEecCCCeEEEEEeecCCCEEecC--CEEEEEecC
Q psy9583 45 ------VILELPAPQDGIINKIIITDGSIVTSN--QVIALIDTD 80 (866)
Q Consensus 45 ------~~~~i~~~~~G~~~~~~~~~g~~v~~g--~~l~~~~~~ 80 (866)
....|.||++|+|.++.+++|+.|..| ++|+.|...
T Consensus 130 ~a~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~~~ 173 (369)
T 1vf7_A 130 QARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQL 173 (369)
T ss_dssp HHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEEECC
T ss_pred HHHHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEecC
Confidence 125799999999999999999999995 899998753
No 398
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.83 E-value=0.00065 Score=80.48 Aligned_cols=40 Identities=28% Similarity=0.500 Sum_probs=36.6
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
.+||+|||||++|++||..|++.|++|+|+|+. +.+||.+
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~------~~~gg~~ 146 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR------DRVGGRV 146 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS------SSSBTTC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecC------CCCCCcc
Confidence 489999999999999999999999999999998 6777765
No 399
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.80 E-value=0.0074 Score=69.03 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHcCCEEEeCceEEEEEEc-CCeEE-EEEeeCCCCccceeEEEecc-EEEEeecccc
Q psy9583 612 EIAKKAFHLLNKQGLNIILNTKIHDIKIN-KENVL-INYSNKSTNVKTEIITSIFD-KLLIAIGRIP 675 (866)
Q Consensus 612 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~-v~~~~~~g~~~~~~~~~~~D-~vi~a~G~~p 675 (866)
.+...+.+.+++.|+++++++.++++..+ ++.+. +.+.. ++. ..++.+| .||+|+|--.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~----~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGK----EVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-TTE----EEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-CCc----EEEEEeCCeEEEeCCChh
Confidence 44556667777889999999999999887 44443 44443 332 3578996 9999999654
No 400
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.78 E-value=0.0056 Score=70.72 Aligned_cols=98 Identities=9% Similarity=0.162 Sum_probs=72.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN------------------------------------------- 607 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------- 607 (866)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 4799999999999999999999999999987643210
Q ss_pred -c-----c---------------------c-HHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEee-CCCCccce
Q psy9583 608 -T-----V---------------------D-EEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSN-KSTNVKTE 658 (866)
Q Consensus 608 -~-----~---------------------d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~-~~g~~~~~ 658 (866)
. + + ..+.+.+.+.+++. +++++++++++.+++++.+++.+ .+|.
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~---- 179 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGA---- 179 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCC----
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCC----
Confidence 0 0 0 12334444445444 88899999999888888887764 2242
Q ss_pred eEEEeccEEEEeecccc
Q psy9583 659 IITSIFDKLLIAIGRIP 675 (866)
Q Consensus 659 ~~~~~~D~vi~a~G~~p 675 (866)
..++.+|.||.|.|...
T Consensus 180 ~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 180 TRAVHARYLVACDGASS 196 (549)
T ss_dssp EEEEEEEEEEECCCTTC
T ss_pred EEEEEeCEEEECCCCCc
Confidence 34799999999999754
No 401
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.75 E-value=0.0009 Score=75.41 Aligned_cols=91 Identities=16% Similarity=0.221 Sum_probs=68.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHh-c------CCcEEEEecCCcCCC----------cccHHHHHHHHHHHHHcCCEEEeCc
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRR-L------GSEVTILEMSSNFLN----------TVDEEIAKKAFHLLNKQGLNIILNT 632 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~-~------g~~Vtli~~~~~~l~----------~~d~~~~~~l~~~l~~~GV~i~~~~ 632 (866)
+++|+|||+|+.|+.+|..|.+ . |.+|+++++.+.+.. ....++...+.+.+++.|++++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 999999999876532 1234567777788888899999885
Q ss_pred eEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccc-cCC
Q psy9583 633 KIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRI-PNT 677 (866)
Q Consensus 633 ~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~-p~~ 677 (866)
.+ +.. +.+. ++ .+.+|.||+|+|.. |..
T Consensus 83 ~v------~~~--v~~~--~~-------~~~~d~lViAtG~~~~~~ 111 (456)
T 1lqt_A 83 VV------GEH--VQPG--EL-------SERYDAVIYAVGAQSDRM 111 (456)
T ss_dssp CB------TTT--BCHH--HH-------HHHSSEEEECCCCCEECC
T ss_pred EE------CCE--EEEC--CC-------eEeCCEEEEeeCCCCCCC
Confidence 53 111 2221 22 46899999999996 443
No 402
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.75 E-value=0.00087 Score=80.86 Aligned_cols=41 Identities=29% Similarity=0.514 Sum_probs=36.6
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCcc
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTC 435 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~ 435 (866)
..+||+|||||++||+||..|++.|++|+|+|+. +.+||.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~------~~~GG~~ 317 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR------DRVGGRV 317 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS------SSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEec------CcCCCce
Confidence 3589999999999999999999999999999997 5677754
No 403
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.72 E-value=0.0036 Score=69.35 Aligned_cols=32 Identities=28% Similarity=0.498 Sum_probs=29.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMS 602 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~ 602 (866)
.+|+|||||.+|+-+|..|++. |.+|+++++.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4799999999999999999999 9999999875
No 404
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.71 E-value=0.0008 Score=83.67 Aligned_cols=93 Identities=23% Similarity=0.420 Sum_probs=70.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCC-cEEEEecCCcCCC---------cccHHHHHHHHHHHHHcCCEEEeCceEEEEEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGS-EVTILEMSSNFLN---------TVDEEIAKKAFHLLNKQGLNIILNTKIHDIKI 639 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~-~Vtli~~~~~~l~---------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 639 (866)
.++|+|||||+.|+.+|..|++.|. +|+++++.+.+.. .++.+..++..+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 5789999999999999999999999 7999999876531 23556677777889999999999887731
Q ss_pred cCCeEEEEEeeCCCCccceeEEEeccEEEEeecc-ccCC
Q psy9583 640 NKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR-IPNT 677 (866)
Q Consensus 640 ~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~-~p~~ 677 (866)
.. +++. ++. .+.+|.|++|||. +|..
T Consensus 264 --~~--v~~~--~~~------~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 --NE--ITLN--TLK------EEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp --TS--BCHH--HHH------HTTCCEEEECCCCCEECC
T ss_pred --ce--EEhh--hcC------ccCCCEEEEecCCCCCCC
Confidence 11 1221 221 4679999999998 5764
No 405
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.70 E-value=0.0078 Score=70.90 Aligned_cols=101 Identities=13% Similarity=0.189 Sum_probs=76.0
Q ss_pred CeEEEECCcHHHHHHHHHHHh-cCCcEEEEecCCcCCC------------------------------------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRR-LGSEVTILEMSSNFLN------------------------------------------ 607 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~-~g~~Vtli~~~~~~l~------------------------------------------ 607 (866)
-+|+|||||+.|+-+|..|++ .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 469999999999999999999 9999999987543210
Q ss_pred ----------------c--------cc-HHHHHHHHHHHHHcCC--EEEeCceEEEEEEcCC----eEEEEEee----CC
Q psy9583 608 ----------------T--------VD-EEIAKKAFHLLNKQGL--NIILNTKIHDIKINKE----NVLINYSN----KS 652 (866)
Q Consensus 608 ----------------~--------~d-~~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~----~~~v~~~~----~~ 652 (866)
. ++ ..+...+.+.+++.|+ ++++++++++++.+++ .+.+++.+ .+
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 00 2455666777888877 9999999999988753 57777764 23
Q ss_pred CCccceeEEEeccEEEEeecccc
Q psy9583 653 TNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 653 g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
|. ..++.+|.||.|.|...
T Consensus 193 G~----~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQ----IETVQARYVVGCDGARS 211 (639)
T ss_dssp TC----EEEEEEEEEEECCCTTC
T ss_pred CC----eEEEEeCEEEECCCcch
Confidence 42 34789999999998653
No 406
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.67 E-value=0.005 Score=73.24 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=67.1
Q ss_pred ccceeeec--CCccHHHHHHHHHHCCCeEEEEeccCCCcccccCCCccceeccccchhHHHhhHHHHHHhhhhhhcCccc
Q psy9583 390 NFDVIVIG--AGPGGYVASIRLAQLGFKTACIDEWKDNEENFALGGTCTNVGCIPSKALLQTSHSFENVKNSFFEYGINT 467 (866)
Q Consensus 390 ~~dVvIIG--gG~AGl~aA~~L~~~g~~V~liek~~~~~~~~~~GG~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~gi~~ 467 (866)
..+|+||| +|..|+.+|..|++.|.+|+++++. +.+.... . .
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~------~~l~~~~-----~------------------------~- 566 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPG------AQVSSWT-----N------------------------N- 566 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESS------SSTTGGG-----G------------------------G-
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecc------ccccccc-----c------------------------c-
Confidence 35699999 9999999999999999999999986 2221100 0 0
Q ss_pred cccccCHHHHHHHHHHHHHhhhhhHHHHHHhCCcEEEEeEEEE-eccccCcccEEEEE---cCCceEEEecEEEEecCCC
Q psy9583 468 QNVTLNLQKMLERKNNIIKKNNSGILFLFKKNKIKFFHGHAIF-TGKIQNNFHEIQII---NKTKETITAKYIIIATGSK 543 (866)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~v~~g~~v~-~~~~~~~~~~v~v~---~~~g~~i~~d~lViATGs~ 543 (866)
.. ....+...+++.||+++.++.+. +.. ..+.+. +.++.++.+|.||+|+|..
T Consensus 567 ----~~--------------~~~~l~~~l~~~GV~i~~~~~V~~i~~-----~~~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 567 ----TF--------------EVNRIQRRLIENGVARVTDHAVVAVGA-----GGVTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp ----GT--------------CHHHHHHHHHHTTCEEEESEEEEEEET-----TEEEEEETTTCCEEEEECSEEEEESCEE
T ss_pred ----ch--------------hHHHHHHHHHHCCCEEEcCcEEEEEEC-----CeEEEEEccCCeEEEEECCEEEECCCCC
Confidence 00 01123445778899999998776 433 334443 2345789999999999988
Q ss_pred Cc
Q psy9583 544 AR 545 (866)
Q Consensus 544 p~ 545 (866)
|.
T Consensus 624 p~ 625 (690)
T 3k30_A 624 PR 625 (690)
T ss_dssp EC
T ss_pred CC
Confidence 75
No 407
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.66 E-value=0.0091 Score=68.07 Aligned_cols=35 Identities=31% Similarity=0.391 Sum_probs=30.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
|+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 68999999999999999999999999999886543
No 408
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.66 E-value=0.0082 Score=67.88 Aligned_cols=98 Identities=26% Similarity=0.407 Sum_probs=69.7
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC-------------c------------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN-------------T------------------------------ 608 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~-------------~------------------------------ 608 (866)
.|+|||+|..|+-+|..+++.|.+|+++++...-.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 489999999999999999999999999988610000 0
Q ss_pred ------------------------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeC
Q psy9583 609 ------------------------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNK 651 (866)
Q Consensus 609 ------------------------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~ 651 (866)
....+...+.+.+++.|++++.++.+ ++..+++.+. +.+...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~ 159 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKR 159 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeC
Confidence 01133455556667789999999999 9876665543 333321
Q ss_pred CCCccceeEEEeccEEEEeeccccCC
Q psy9583 652 STNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 652 ~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
+| ++.+|.||+|+|..+..
T Consensus 160 ~g-------~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 160 GL-------VEDVDKLVLATGGYSYL 178 (472)
T ss_dssp EE-------ECCCSEEEECCCCCGGG
T ss_pred CC-------eEEeeeEEECCCCCccc
Confidence 22 46799999999987644
No 409
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.60 E-value=0.019 Score=63.84 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=40.4
Q ss_pred HHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeeccccCCCC
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~~ 679 (866)
.+.+++.|++|++++.|++|..+++++. +.+ +|. ++.+|.||+|+|......+
T Consensus 203 ~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~---~g~------~~~ad~VV~a~~~~~~~~l 256 (425)
T 3ka7_A 203 ETVISANGGKIHTGQEVSKILIENGKAAGIIA---DDR------IHDADLVISNLGHAATAVL 256 (425)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEEE---TTE------EEECSEEEECSCHHHHHHH
T ss_pred HHHHHHcCCEEEECCceeEEEEECCEEEEEEE---CCE------EEECCEEEECCCHHHHHHh
Confidence 4556678999999999999998877765 433 354 7999999999987544333
No 410
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.52 E-value=0.017 Score=61.24 Aligned_cols=165 Identities=16% Similarity=0.165 Sum_probs=99.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCCCc--------------------------------------cc
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFLNT--------------------------------------VD 610 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l~~--------------------------------------~d 610 (866)
-+|+|||+|+.|+.+|..|++. |.+|+++++.+..... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4799999999999999999998 9999999986544200 12
Q ss_pred HHHHHHHHHHHHHc-CCEEEeCceEEEEEEcC----C--eEE-EEEe----eCCC--CccceeEEEec------------
Q psy9583 611 EEIAKKAFHLLNKQ-GLNIILNTKIHDIKINK----E--NVL-INYS----NKST--NVKTEIITSIF------------ 664 (866)
Q Consensus 611 ~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~----~--~~~-v~~~----~~~g--~~~~~~~~~~~------------ 664 (866)
.++...+.+.+.+. |++++.++.++++..++ + .+. +.+. ..++ ....+...+.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 34455666666664 99999999999998763 2 222 2221 1112 01112357889
Q ss_pred ---cEEEEeeccccCCCCCCccccCeeecCCCc------E--------EeCCCCC-CCCCCEEEecccC----CCCC---
Q psy9583 665 ---DKLLIAIGRIPNTNNLNIDKIGLKVNENNF------I--------IVNDNCE-TNIPNIYAIGDVV----RGPM--- 719 (866)
Q Consensus 665 ---D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~------i--------~Vd~~l~-Ts~~~VyA~GD~a----~~~~--- 719 (866)
+.||.|+|.......+..+.. ..++..+. . +|+..-+ +-+|++|++|-.+ +.++
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~ 304 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRI-VDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP 304 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHH-HHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCS
T ss_pred ccCCEEEECcCCCchHHHHHHhhc-cccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCCh
Confidence 999999998764433211111 01111110 1 1111112 2679999999887 3331
Q ss_pred cHHHHHHHHHHHHHHHh
Q psy9583 720 LAHKAEEEGIMVAEHIS 736 (866)
Q Consensus 720 ~~~~A~~~g~~aa~~i~ 736 (866)
..-.-..+|+.||+.|+
T Consensus 305 ~fg~m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 305 TFGAMALSGVHAAEQIL 321 (326)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHH
Confidence 22233467888888775
No 411
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.50 E-value=0.014 Score=64.81 Aligned_cols=51 Identities=14% Similarity=0.274 Sum_probs=39.1
Q ss_pred HHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCCC
Q psy9583 618 FHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNTN 678 (866)
Q Consensus 618 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~~ 678 (866)
.+.+++.|++|++++.|++|..+++++ + . .+|. ++.+|.||+|+|......
T Consensus 196 ~~~~~~~G~~i~~~~~V~~i~~~~~~v-V--~-~~g~------~~~ad~Vv~a~~~~~~~~ 246 (421)
T 3nrn_A 196 ERIIMENKGKILTRKEVVEINIEEKKV-Y--T-RDNE------EYSFDVAISNVGVRETVK 246 (421)
T ss_dssp HHHHHTTTCEEESSCCEEEEETTTTEE-E--E-TTCC------EEECSEEEECSCHHHHHH
T ss_pred HHHHHHCCCEEEcCCeEEEEEEECCEE-E--E-eCCc------EEEeCEEEECCCHHHHHH
Confidence 344566799999999999999877776 3 2 3555 799999999999754433
No 412
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.49 E-value=0.0021 Score=70.68 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=67.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhc--CCcEEEEecCCcCC-----------------------Cc-----------------
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL--GSEVTILEMSSNFL-----------------------NT----------------- 608 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~--g~~Vtli~~~~~~l-----------------------~~----------------- 608 (866)
.+|+|||||+.|+.+|..|++. |.+|+++++.+.+. ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3699999999999999999999 99999999875440 00
Q ss_pred ---------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeecc
Q psy9583 609 ---------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 609 ---------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
...++.+.+.+.+++.|++++++++|++++.. . ++.+|.||.|.|.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~------~~~ad~vV~AdG~ 141 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------P------LADYDLVVLANGV 141 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------------C------GGGCSEEEECCGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------------c------cccCCEEEECCCC
Confidence 01456677777788889999999988766421 0 2568999999998
Q ss_pred ccC
Q psy9583 674 IPN 676 (866)
Q Consensus 674 ~p~ 676 (866)
...
T Consensus 142 ~S~ 144 (381)
T 3c4a_A 142 NHK 144 (381)
T ss_dssp GGG
T ss_pred Cch
Confidence 765
No 413
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.49 E-value=0.016 Score=70.46 Aligned_cols=54 Identities=11% Similarity=0.047 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeCCCCccceeEEEeccEEEEeecccc
Q psy9583 613 IAKKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNKSTNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 613 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
+...+.+.+++.|++++.++.|+++..+++++. +.. .+| ++.+|.||+|+|...
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t--~~G-------~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQT--ADG-------VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE--TTE-------EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEE--CCc-------EEECCEEEECCccch
Confidence 334556667788999999999999988766653 332 233 689999999999753
No 414
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.45 E-value=0.024 Score=65.40 Aligned_cols=55 Identities=5% Similarity=0.024 Sum_probs=39.0
Q ss_pred HHHHHHHHc-CCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 616 KAFHLLNKQ-GLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 616 ~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
.+.+.+++. |++++.+ +|+++..++++..+.+...+|. ++.+|.||.|+|.....
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~------~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGR------VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSC------EEECSEEEECCGGGCCC
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCC------EEECCEEEECCCCchhh
Confidence 344555666 9999999 9999987654422223333565 79999999999987654
No 415
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.43 E-value=0.0014 Score=75.37 Aligned_cols=34 Identities=18% Similarity=0.499 Sum_probs=31.9
Q ss_pred ccccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 388 NKNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 388 ~~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
...||+||||||+||+.+|.+|++ |.+|+|+|++
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG 57 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERG 57 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSS
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecC
Confidence 346999999999999999999999 9999999997
No 416
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.38 E-value=0.029 Score=64.86 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCeEE-EEEeeC-CCCccceeEEEeccEEEEeecccc
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKENVL-INYSNK-STNVKTEIITSIFDKLLIAIGRIP 675 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-v~~~~~-~g~~~~~~~~~~~D~vi~a~G~~p 675 (866)
..+.+.+++.|++++++++|+++..+++++. +.+.+. +|. ...+.+|.||.|+|...
T Consensus 174 ~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~----~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 174 LEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDT----THTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCC----EEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCc----eEEEECCEEEECCCcch
Confidence 3444566778999999999999998877643 555431 232 35799999999999643
No 417
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.30 E-value=0.019 Score=65.94 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=38.9
Q ss_pred HHHHHHHH-cCCEEEeCceEEEEEEcCCeEEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 616 KAFHLLNK-QGLNIILNTKIHDIKINKENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 616 ~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
.+.+.+++ .|++++.+ +|+++..++++..+.+...+|. ++.+|.||.|+|.....
T Consensus 180 ~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~------~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 180 LLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNG------EISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSC------EEECSEEEECSGGGCCC
T ss_pred HHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCC------EEEcCEEEECCCcchHH
Confidence 34455566 79999999 6999987655433333333554 69999999999997654
No 418
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.29 E-value=0.012 Score=70.37 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=30.7
Q ss_pred ccceeeec--CCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIG--AGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIG--gG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..+|+||| ||..|+.+|..|++.|.+|+++++.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~ 562 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV 562 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecc
Confidence 36899999 9999999999999999999999986
No 419
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.22 E-value=0.0019 Score=74.27 Aligned_cols=35 Identities=23% Similarity=0.509 Sum_probs=32.1
Q ss_pred ccceeeecCCccHHHHHHHHHH-CCCeEEEEeccCC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-LGFKTACIDEWKD 424 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-~g~~V~liek~~~ 424 (866)
+||+||||||+||+.+|.+|++ .|++|+|+|+++.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6999999999999999999998 5799999999843
No 420
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.18 E-value=0.0025 Score=73.71 Aligned_cols=34 Identities=38% Similarity=0.700 Sum_probs=32.4
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.||++|||+|++|+.+|.+|++.|++|+|+|++.
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5999999999999999999999999999999974
No 421
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.07 E-value=0.0025 Score=73.73 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=31.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCC-CeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG-FKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~~ 423 (866)
.||+||||||.||+.+|.+|++.+ .+|+|||++.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~ 40 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGI 40 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 599999999999999999999997 7999999984
No 422
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.05 E-value=0.036 Score=65.44 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=30.0
Q ss_pred CeEEEECCcHHHHHHHHHHHh-----cCCcEEEEecCC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRR-----LGSEVTILEMSS 603 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~-----~g~~Vtli~~~~ 603 (866)
-.|+|||||+.|+-+|..|++ .|.+|+++++.+
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 369999999999999999999 999999998754
No 423
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.00 E-value=0.045 Score=62.48 Aligned_cols=54 Identities=7% Similarity=0.042 Sum_probs=39.4
Q ss_pred HHHHHHHHHcCCEEEeCceEEEEEEcCCe--EEEEEeeCCCCccceeEEEeccEEEEeeccccCC
Q psy9583 615 KKAFHLLNKQGLNIILNTKIHDIKINKEN--VLINYSNKSTNVKTEIITSIFDKLLIAIGRIPNT 677 (866)
Q Consensus 615 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~~ 677 (866)
..+.+.+++.|++++.+ +|+++..++++ +.+.+ .+|. ++.+|.||.|+|.....
T Consensus 177 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~--~~g~------~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT--KQHG------EISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE--SSSC------EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE--CCCC------EEEcCEEEECCCcchHH
Confidence 33445566679999999 99999875544 33444 3564 79999999999987654
No 424
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.98 E-value=0.034 Score=64.71 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=69.4
Q ss_pred eEEEECCcHHHHHHHHHHHhcC--CcEEEEecCCcCCC-----------cc-----------------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLG--SEVTILEMSSNFLN-----------TV----------------------------- 609 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g--~~Vtli~~~~~~l~-----------~~----------------------------- 609 (866)
.|+|||+|..|+-+|..|++.| .+|+++++.+.... .+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 86 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYF 86 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 6999999999999999999999 99999987532100 00
Q ss_pred ----------------------------------------------cHHHHHHHHHHHHHcC-CEEEeCceEEEEEEcCC
Q psy9583 610 ----------------------------------------------DEEIAKKAFHLLNKQG-LNIILNTKIHDIKINKE 642 (866)
Q Consensus 610 ----------------------------------------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~ 642 (866)
...+...+.+.+.+.| |+++.++.++++..+++
T Consensus 87 ~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g 166 (602)
T 1kf6_A 87 VHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDG 166 (602)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCC
Confidence 0123344445556677 99999999999987766
Q ss_pred eEE-EEEee-CCCCccceeEEEeccEEEEeecc
Q psy9583 643 NVL-INYSN-KSTNVKTEIITSIFDKLLIAIGR 673 (866)
Q Consensus 643 ~~~-v~~~~-~~g~~~~~~~~~~~D~vi~a~G~ 673 (866)
.+. +.+.+ .+|. ...+.++.||+|+|.
T Consensus 167 ~v~Gv~~~~~~~G~----~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 167 HVRGLVAMNMMEGT----LVQIRANAVVMATGG 195 (602)
T ss_dssp EEEEEEEEETTTTE----EEEEECSCEEECCCC
T ss_pred EEEEEEEEEcCCCc----EEEEEcCeEEECCCC
Confidence 443 22322 3443 347899999999985
No 425
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=95.88 E-value=0.067 Score=61.87 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS 603 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~ 603 (866)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999998653
No 426
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=95.82 E-value=0.00052 Score=75.22 Aligned_cols=63 Identities=22% Similarity=0.355 Sum_probs=54.3
Q ss_pred CeEEEEEEEeCCCCeeeCCCeEEEEEecc---------------------------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVRNENLIDIETDK--------------------------------------------------- 44 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~g~~l~~ve~~k--------------------------------------------------- 44 (866)
..|+|.+++|++||.|++||+|+++++..
T Consensus 39 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 118 (369)
T 4dk0_A 39 VSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLN 118 (369)
T ss_dssp SCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHH
T ss_pred CCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHH
Confidence 46999999999999999999999998642
Q ss_pred ----------------------------------eeeEEecCCCeEEEEEeecCCCEEecCCE---EEEEe
Q psy9583 45 ----------------------------------VILELPAPQDGIINKIIITDGSIVTSNQV---IALID 78 (866)
Q Consensus 45 ----------------------------------~~~~i~~~~~G~~~~~~~~~g~~v~~g~~---l~~~~ 78 (866)
....|.||++|+|.++.+++|+.|..|++ |+.+.
T Consensus 119 ~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~ 189 (369)
T 4dk0_A 119 TAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVA 189 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTSCCCCBBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCCcceEEEEc
Confidence 01359999999999999999999999998 65554
No 427
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.82 E-value=0.0028 Score=74.42 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=31.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCC--------CeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLG--------FKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g--------~~V~liek~ 422 (866)
.++|+|||||++||+||..|++.| ++|+|+|+.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~ 96 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEAD 96 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEecc
Confidence 478999999999999999999998 999999997
No 428
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.78 E-value=0.004 Score=72.00 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=32.1
Q ss_pred cccceeeecCCccHHHHHHHHHHC-CCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~ 423 (866)
..||+||||||.||+.+|.+|++. +.+|+|+|++.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 359999999999999999999985 79999999985
No 429
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.69 E-value=0.0071 Score=70.08 Aligned_cols=60 Identities=10% Similarity=0.091 Sum_probs=46.7
Q ss_pred cHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC--CeEEEEEeeCCCCccceeEEEeccEEEEeeccccC
Q psy9583 610 DEEIAKKAFHLLNKQGLNIILNTKIHDIKINK--ENVLINYSNKSTNVKTEIITSIFDKLLIAIGRIPN 676 (866)
Q Consensus 610 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~~~~g~~~~~~~~~~~D~vi~a~G~~p~ 676 (866)
...+.+.+.+.++..|..+++++.|.+|..++ +.+.... ..+|+ .+.+|.||.....-|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~-~~~Ge------~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVI-DQFGQ------RIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEE-ETTSC------EEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEE-eCCCC------EEEcCEEEEChhhcCH
Confidence 35778888899999999999999999998766 4454433 34676 8899999997776654
No 430
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.66 E-value=0.005 Score=71.04 Aligned_cols=34 Identities=29% Similarity=0.532 Sum_probs=31.8
Q ss_pred ccceeeecCCccHHHHHHHHHH-CCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-LGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-~g~~V~liek~~ 423 (866)
.||+||||||.||+.+|.+|++ .+.+|+|+|++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 4999999999999999999999 689999999984
No 431
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.65 E-value=0.0049 Score=53.32 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=41.8
Q ss_pred CCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 34 NENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 34 g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
|..+|.+|.++-...|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~ 51 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVM 51 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEET
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEec
Confidence 45567778888888999999999999999999999999999999853
No 432
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.59 E-value=0.0062 Score=69.60 Aligned_cols=35 Identities=37% Similarity=0.609 Sum_probs=32.7
Q ss_pred cccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 389 KNFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 389 ~~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.+||++|||+|++|+.+|.+|++.|.+|+|+|++.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 35999999999999999999999999999999973
No 433
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.57 E-value=0.072 Score=60.56 Aligned_cols=105 Identities=18% Similarity=0.162 Sum_probs=73.2
Q ss_pred eEEEECCcHHHHHHHHHHHhcC--------------CcEEEEecCCcCC-------Cc----------------------
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLG--------------SEVTILEMSSNFL-------NT---------------------- 608 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g--------------~~Vtli~~~~~~l-------~~---------------------- 608 (866)
.|+|||+|+.|+-+|..|.+.| ....++++.+.+. +.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5899999999999999988753 2456677665321 10
Q ss_pred ----------------------ccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCC--------eEEEEEeeCCCCccce
Q psy9583 609 ----------------------VDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKE--------NVLINYSNKSTNVKTE 658 (866)
Q Consensus 609 ----------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--------~~~v~~~~~~g~~~~~ 658 (866)
.-.++.++++...++.+..+.++++|++++..+. .+.|+..+... ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~---g~ 197 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET---GE 197 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT---CC
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCC---ce
Confidence 0135566666666666777999999999986432 36666654221 22
Q ss_pred eEEEeccEEEEeeccccCCCC
Q psy9583 659 IITSIFDKLLIAIGRIPNTNN 679 (866)
Q Consensus 659 ~~~~~~D~vi~a~G~~p~~~~ 679 (866)
..++.++.|++|+|..|+.+.
T Consensus 198 ~~~~~ar~vVlatG~~P~iP~ 218 (501)
T 4b63_A 198 ISARRTRKVVIAIGGTAKMPS 218 (501)
T ss_dssp EEEEEEEEEEECCCCEECCCT
T ss_pred EEEEEeCEEEECcCCCCCCCC
Confidence 457899999999999888764
No 434
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=95.54 E-value=0.027 Score=60.11 Aligned_cols=60 Identities=17% Similarity=0.178 Sum_probs=50.7
Q ss_pred EEEEEEeCCCCeeeCCCeEEEEEe----cceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 19 TLLNWHKKEGELVVRNENLIDIET----DKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 19 ~i~~w~~~~G~~v~~g~~l~~ve~----~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
=+++.+++.||.|++||+|++|.. .....+|.||.+|+|... ...-.|..|+.|+.|...
T Consensus 266 Gl~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~--~~~~~V~~G~~l~~Ia~~ 329 (331)
T 3na6_A 266 GLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISR--HFPGMIKSGDCAAVIGVV 329 (331)
T ss_dssp EEEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEE--ECSSEECTTCEEEEEECB
T ss_pred eEEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEE--eCCCccCCCCEEEEEecc
Confidence 377788999999999999999986 356789999999999654 456789999999998753
No 435
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.44 E-value=0.0077 Score=68.73 Aligned_cols=34 Identities=29% Similarity=0.510 Sum_probs=32.3
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~~ 423 (866)
.||++|||+|++|+.+|.+|++.|.+|+|||++.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4999999999999999999999999999999973
No 436
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=95.42 E-value=0.077 Score=59.30 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=29.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcC-CcEEEEec
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLG-SEVTILEM 601 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g-~~Vtli~~ 601 (866)
.+|+|||||..|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 437
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=95.38 E-value=0.032 Score=60.18 Aligned_cols=60 Identities=28% Similarity=0.197 Sum_probs=52.6
Q ss_pred EEEEEeCCCCeeeCCCeEEEEEe----cceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 20 LLNWHKKEGELVVRNENLIDIET----DKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 20 i~~w~~~~G~~v~~g~~l~~ve~----~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
+++..++.||.|++||+|++|+. .+...+|.||.+|+|... .....|..|+.|+.|....
T Consensus 277 ~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~--~~~~~V~~Gd~l~~ia~~~ 340 (354)
T 3cdx_A 277 LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFG--AGPGRVTRGDAVAVVMEDY 340 (354)
T ss_dssp EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEE--ECSSEECTTCEEEEEEEEC
T ss_pred EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEE--eCCCccCCCCEEEEEeeec
Confidence 77888999999999999999997 488899999999999754 5788999999999997543
No 438
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.37 E-value=0.055 Score=60.78 Aligned_cols=34 Identities=32% Similarity=0.468 Sum_probs=31.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhcC------CcEEEEecCCc
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLG------SEVTILEMSSN 604 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g------~~Vtli~~~~~ 604 (866)
++|+|||||.+|+-+|..|++.| .+|+++++.++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~ 45 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPR 45 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCC
Confidence 58999999999999999999999 89999988653
No 439
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.30 E-value=0.17 Score=58.72 Aligned_cols=54 Identities=13% Similarity=0.057 Sum_probs=37.6
Q ss_pred HHHHHHHcCCEEEeCceEEEEEEc-CCeEE-EEEee-CCCCccceeEEEeccEEEEeeccc
Q psy9583 617 AFHLLNKQGLNIILNTKIHDIKIN-KENVL-INYSN-KSTNVKTEIITSIFDKLLIAIGRI 674 (866)
Q Consensus 617 l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~-v~~~~-~~g~~~~~~~~~~~D~vi~a~G~~ 674 (866)
+.+.+++.||++++++.++++..+ ++.+. +.+.+ .+|. ...+.++.||+|+|.-
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~----~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGE----VVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCC----EEEEEEEEEEECCCCC
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCe----EEEEEcCEEEECCCCC
Confidence 445556679999999999999875 44432 33332 3443 3468999999999963
No 440
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=95.23 E-value=0.039 Score=59.69 Aligned_cols=60 Identities=15% Similarity=0.226 Sum_probs=51.1
Q ss_pred EEEEEEeCCCCeeeCCCeEEEEEe------cceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 19 TLLNWHKKEGELVVRNENLIDIET------DKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 19 ~i~~w~~~~G~~v~~g~~l~~ve~------~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
=|.+.+++.||.|++||+|++|-. .....+|.||.+|+|. .....-.|..|+.|+.|..+
T Consensus 299 Gl~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi--~~~~~p~V~~G~~l~~i~~~ 364 (368)
T 3fmc_A 299 GMVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPI--LHFASASVHQGTELYKVMTK 364 (368)
T ss_dssp EEEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEE--EECSSSEECTTCEEEEEEES
T ss_pred EEEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEE--EEeCCCccCCCCEEEEEeee
Confidence 456788999999999999999987 4578899999999995 55666899999999998753
No 441
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.21 E-value=0.091 Score=62.82 Aligned_cols=36 Identities=36% Similarity=0.541 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
..+|+|||+|..|+-.|..|++.|.+|+++++.+++
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 468999999999999999999999999999986543
No 442
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.10 E-value=0.15 Score=59.38 Aligned_cols=32 Identities=19% Similarity=0.193 Sum_probs=27.8
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCC
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS 603 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~ 603 (866)
.|+|||+|..|+-.|..+++.|.+|.++++.+
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 68999999999999999999999999987653
No 443
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.00 E-value=0.06 Score=61.80 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=29.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~ 604 (866)
-.|+|||+|..|+-+|..+++ |.+|+++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 369999999999999999999 999999988754
No 444
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=94.99 E-value=0.028 Score=45.02 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=30.6
Q ss_pred EEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 48 ELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 48 ~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
+|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 33 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESM 33 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECC
Confidence 378999999999999999999999999999864
No 445
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.95 E-value=0.011 Score=68.10 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=32.1
Q ss_pred ccceeeecCCccHHHHHHHHHHC-CCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQL-GFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~-g~~V~liek~~ 423 (866)
.||++|||+|++|+.+|.+|++. |.+|+|+|++.
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 59999999999999999999998 89999999984
No 446
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=94.86 E-value=0.013 Score=67.98 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=32.2
Q ss_pred ccceeeecCCccHHHHHHHHHH-CCCeEEEEeccC
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQ-LGFKTACIDEWK 423 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~-~g~~V~liek~~ 423 (866)
.||++|||+|++|+.+|.+|++ .|.+|+|+|++.
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 5999999999999999999999 799999999984
No 447
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.79 E-value=0.2 Score=58.70 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=27.8
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCC
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS 603 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~ 603 (866)
.|+|||+|..|+-.|..+++.|.+|+++++.+
T Consensus 7 DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp SEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 58999999999999999999999999987653
No 448
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=94.66 E-value=0.043 Score=44.11 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=31.6
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
..|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 39 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAM 39 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred eEEecCCCEEEEEEEcCCCCEeCCCCEEEEEecc
Confidence 4688999999999999999999999999999854
No 449
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=94.62 E-value=0.038 Score=44.88 Aligned_cols=35 Identities=29% Similarity=0.590 Sum_probs=32.1
Q ss_pred eeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 46 ILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 46 ~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
...|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 8 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~ 42 (77)
T 1dcz_A 8 EGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAM 42 (77)
T ss_dssp SSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEET
T ss_pred CeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEcc
Confidence 35789999999999999999999999999999854
No 450
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.39 E-value=0.032 Score=56.99 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=31.9
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999998765
No 451
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.36 E-value=0.11 Score=58.29 Aligned_cols=33 Identities=33% Similarity=0.345 Sum_probs=30.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..+|+|||.|.+|+++|..|+++|++|++.|+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 367999999999999999999999999999985
No 452
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=94.19 E-value=0.051 Score=48.20 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=32.1
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
+.|.|+.+|+|.++++++|+.|..|++|+.++..
T Consensus 2 ~~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 35 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQD 35 (116)
T ss_dssp EEECCSSCEEEEEECSCTTSEECTTCEEEEEECT
T ss_pred eEEeCcCCEEEEEEECCCcCEECCCCEEEEECHH
Confidence 5799999999999999999999999999999865
No 453
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=93.93 E-value=0.043 Score=45.52 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=32.1
Q ss_pred eEEecCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 47 LELPAPQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 47 ~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
.+|.||.+|+|.++++++|+.|..|++|+.++...
T Consensus 6 ~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 40 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMK 40 (84)
T ss_dssp TEECCSSSCCEEEESSCTTEEECTTCEEEEEECSS
T ss_pred ceEECCCCEEEEEEECCCCCEECCCCEEEEEEecc
Confidence 47999999999999999999999999999998543
No 454
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=93.15 E-value=0.093 Score=49.05 Aligned_cols=60 Identities=23% Similarity=0.332 Sum_probs=51.9
Q ss_pred CeEEEEEEEeCCCCeeeC----CCeEEEEEecceeeEEecCCCeEEEEE-------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVR----NENLIDIETDKVILELPAPQDGIINKI------------------------------- 60 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~----g~~l~~ve~~k~~~~i~~~~~G~~~~~------------------------------- 60 (866)
-.|+|+.+. ++.|.|-. |+-++...++ ..+.||.+|+|..+
T Consensus 19 ~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~ 94 (161)
T 1f3z_A 19 LSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE 94 (161)
T ss_dssp SCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTT
T ss_pred CCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCC
Confidence 469999975 78888766 8889887776 57899999999988
Q ss_pred ----eecCCCEEecCCEEEEEec
Q psy9583 61 ----IITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 61 ----~~~~g~~v~~g~~l~~~~~ 79 (866)
++++||.|..|++|+.++.
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d~ 117 (161)
T 1f3z_A 95 GFKRIAEEGQRVKVGDTVIEFDL 117 (161)
T ss_dssp TEEECSCTTCEECTTCEEEEECH
T ss_pred ccEEEEeCcCEECCCCEEEEECH
Confidence 8999999999999999974
No 455
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=93.04 E-value=0.46 Score=55.65 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=29.3
Q ss_pred CeEEEECCcHHHHHHHHHHH---h-cCCcEEEEecCC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWR---R-LGSEVTILEMSS 603 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~---~-~g~~Vtli~~~~ 603 (866)
-.|+|||+|..|+-+|..++ + .|.+|.++++.+
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 36999999999999999999 5 899999998765
No 456
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=92.43 E-value=0.25 Score=52.73 Aligned_cols=60 Identities=10% Similarity=0.128 Sum_probs=48.6
Q ss_pred EEEEEEEeCCCCeeeCCCeEEEEEe----cceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEec
Q psy9583 18 ATLLNWHKKEGELVVRNENLIDIET----DKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 18 g~i~~w~~~~G~~v~~g~~l~~ve~----~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~ 79 (866)
+-+....++.|+.|++||+|+++-. .+...+|.||.+|+|.- ....-.|..|+.|+.+..
T Consensus 265 ~G~~~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~--~~~~p~V~~Gd~l~~ia~ 328 (332)
T 2qj8_A 265 PGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFA--IRSAMYVQGNEEVAILAR 328 (332)
T ss_dssp SEEEEECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEE--EECSEEECTTCEEEEEEE
T ss_pred CeEEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEE--EeCCCeeCCCCEEEEEee
Confidence 3455677899999999999999954 46778999999999954 446677889999988864
No 457
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=92.07 E-value=0.12 Score=47.86 Aligned_cols=60 Identities=13% Similarity=0.253 Sum_probs=51.3
Q ss_pred CeEEEEEEEeCCCCeeeC----CCeEEEEEecceeeEEecCCCeEEEE--------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVR----NENLIDIETDKVILELPAPQDGIINK-------------------------------- 59 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~----g~~l~~ve~~k~~~~i~~~~~G~~~~-------------------------------- 59 (866)
-.|+|+... ++.|.|-. |+-++...++ ..+.||.+|+|..
T Consensus 14 ~~G~vv~l~-~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidTv~l~G~ 89 (154)
T 2gpr_A 14 CDGTIITLD-EVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGN 89 (154)
T ss_dssp SSEEEECGG-GSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTC
T ss_pred CCeEEEEee-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcchhhcCCC
Confidence 458999874 88888766 8889988776 5899999999987
Q ss_pred ---EeecCCCEEecCCEEEEEec
Q psy9583 60 ---IIITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 60 ---~~~~~g~~v~~g~~l~~~~~ 79 (866)
+++++||.|..|++|+.++.
T Consensus 90 gF~~~V~~Gd~V~~G~~L~~~d~ 112 (154)
T 2gpr_A 90 GFESFVTQDQEVNAGDKLVTVDL 112 (154)
T ss_dssp SEEECCCTTCEECTTCEEEEECH
T ss_pred ceEEEEcCCCEEcCCCEEEEECH
Confidence 48999999999999999974
No 458
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.79 E-value=0.13 Score=46.67 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=30.1
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
++|+|||+|..|...|..|.+.|++|+++|+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999999999999999999999999985
No 459
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=91.77 E-value=0.15 Score=43.68 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=32.2
Q ss_pred eeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 46 ILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 46 ~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
...|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 14 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~ 48 (99)
T 2ejm_A 14 QGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAM 48 (99)
T ss_dssp CSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESS
T ss_pred ceEEecCCCEEEEEEECCCCCEECCCCEEEEEEcc
Confidence 45689999999999999999999999999999864
No 460
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=91.64 E-value=0.14 Score=41.83 Aligned_cols=34 Identities=15% Similarity=0.288 Sum_probs=31.3
Q ss_pred eEEecCCCeEEEEE-------eecCCCEEecCCEEEEEecC
Q psy9583 47 LELPAPQDGIINKI-------IITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 47 ~~i~~~~~G~~~~~-------~~~~g~~v~~g~~l~~~~~~ 80 (866)
..|.||..|++.++ ++++|+.|..|++|+.++..
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~ 45 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAM 45 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEET
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEec
Confidence 46899999999998 89999999999999999864
No 461
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=91.47 E-value=0.074 Score=45.15 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=31.7
Q ss_pred eeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 46 ILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 46 ~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
...|.||.+|+|.++.+++|+.|..|++|+.++..
T Consensus 25 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~ 59 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAM 59 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC-
T ss_pred ceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecc
Confidence 45689999999999999999999999999999854
No 462
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=91.44 E-value=0.56 Score=54.97 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=28.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhc------CCcEEEEecC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL------GSEVTILEMS 602 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~------g~~Vtli~~~ 602 (866)
-.|+|||+|..|+-+|..+++. |.+|+++++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3699999999999999999987 9999999874
No 463
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.32 E-value=0.17 Score=47.33 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=30.8
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
..+|+|+|+|.-|...|..|++.|++|+++|+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 367999999999999999999999999999986
No 464
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.27 E-value=0.14 Score=54.56 Aligned_cols=78 Identities=17% Similarity=0.120 Sum_probs=57.7
Q ss_pred CCeEEEECCcHHHHH-HHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEE
Q psy9583 570 PKKLCIIGAGVIGLE-IGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINY 648 (866)
Q Consensus 570 ~~~vvVIGgG~~glE-~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~ 648 (866)
.+++.|||.|-+|+. +|..|.++|.+|++.++.+.. . ..+.|++.|++++.+.....+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~------~----~~~~L~~~gi~v~~g~~~~~l----------- 62 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP------P----MSTQLEALGIDVYEGFDAAQL----------- 62 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT------T----HHHHHHHTTCEEEESCCGGGG-----------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc------H----HHHHHHhCCCEEECCCCHHHc-----------
Confidence 578999999999997 899999999999999886541 1 235677889988754321000
Q ss_pred eeCCCCccceeEE-EeccEEEEeeccccCCCCC
Q psy9583 649 SNKSTNVKTEIIT-SIFDKLLIAIGRIPNTNNL 680 (866)
Q Consensus 649 ~~~~g~~~~~~~~-~~~D~vi~a~G~~p~~~~l 680 (866)
. ..+|.||++.|..|+.+.+
T Consensus 63 ------------~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 63 ------------DEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ------------GSCCCSEEEECTTCCTTCHHH
T ss_pred ------------CCCCCCEEEECCCcCCCCHHH
Confidence 1 1479999999998877653
No 465
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.04 E-value=0.18 Score=46.18 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=30.4
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+++|+|+|.-|...|..|.+.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 57999999999999999999999999999985
No 466
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=90.86 E-value=0.14 Score=47.90 Aligned_cols=60 Identities=13% Similarity=0.214 Sum_probs=51.3
Q ss_pred CeEEEEEEEeCCCCeeeC----CCeEEEEEecceeeEEecCCCeEEEEE-------------------------------
Q psy9583 16 SEATLLNWHKKEGELVVR----NENLIDIETDKVILELPAPQDGIINKI------------------------------- 60 (866)
Q Consensus 16 ~~g~i~~w~~~~G~~v~~----g~~l~~ve~~k~~~~i~~~~~G~~~~~------------------------------- 60 (866)
-.|+|+.+ .++.|.|-. |+-++...++ ..+.||.+|+|..+
T Consensus 19 ~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGidTV~l~G~ 94 (162)
T 1ax3_A 19 ITGEIHPI-TDVPDQVFSGKMMGDGFAILPSE---GIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGE 94 (162)
T ss_dssp CSEEEEEG-GGSSSHHHHTCTTSEEEEEEECS---SEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSSSTTTTTTT
T ss_pred CceEEEEe-EECCCccccccceeceEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECccchhcCCC
Confidence 36999997 778888766 8888877763 57899999999988
Q ss_pred ----eecCCCEEecCCEEEEEec
Q psy9583 61 ----IITDGSIVTSNQVIALIDT 79 (866)
Q Consensus 61 ----~~~~g~~v~~g~~l~~~~~ 79 (866)
++++||.|..|++|+.++.
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d~ 117 (162)
T 1ax3_A 95 GFTSFVSEGDRVEPGQKLLEVDL 117 (162)
T ss_dssp TEEESCCCCSEECSEEEEEEECH
T ss_pred ccEEEEeCCCEEcCCCEEEEECH
Confidence 8899999999999999974
No 467
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.80 E-value=0.19 Score=46.00 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=30.6
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+++|+|.|.-|...|..|.+.|++|+++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 57999999999999999999999999999986
No 468
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=90.78 E-value=0.24 Score=51.35 Aligned_cols=54 Identities=24% Similarity=0.193 Sum_probs=39.9
Q ss_pred CCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 26 KEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 26 ~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
+.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|..|++|+.++..
T Consensus 3 ~~~~~~~~v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~ 56 (277)
T 2f1m_A 3 KTEPLQITTELPGRTSAY-RIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPA 56 (277)
T ss_dssp -------CCEEEEEEECS-EEEEECCSSCEEEEEECSCTTCEECTTSCSEEECCH
T ss_pred eeeccceEEEEEEEEEee-eEEEEEccccEEEEEEEcCCCCEecCCCEEEEECcH
Confidence 334444444556677764 467899999999999999999999999999999853
No 469
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.73 E-value=0.2 Score=46.63 Aligned_cols=33 Identities=21% Similarity=0.177 Sum_probs=30.7
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
+.+++|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 367999999999999999999999999999985
No 470
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.60 E-value=0.16 Score=56.81 Aligned_cols=80 Identities=16% Similarity=0.159 Sum_probs=59.3
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcccHHHHHHHHHHHHHcCCEEEeCceEEEEEEcCCeEEEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTVDEEIAKKAFHLLNKQGLNIILNTKIHDIKINKENVLINY 648 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~ 648 (866)
.++++.|||.|.+|+-+|..|.++|.+|++.+.++... + ...+.|++.|++++.+.....
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~---~-----~~~~~L~~~gi~~~~g~~~~~------------ 67 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE---N-----PTAQSLLEEGIKVVCGSHPLE------------ 67 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG---C-----HHHHHHHHTTCEEEESCCCGG------------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC---C-----hHHHHHHhCCCEEEECCChHH------------
Confidence 36899999999999999999999999999998865311 1 223567788999886553110
Q ss_pred eeCCCCccceeEEEe-ccEEEEeeccccCCCC
Q psy9583 649 SNKSTNVKTEIITSI-FDKLLIAIGRIPNTNN 679 (866)
Q Consensus 649 ~~~~g~~~~~~~~~~-~D~vi~a~G~~p~~~~ 679 (866)
. .-. +|.||++.|..++.+.
T Consensus 68 -----~------~~~~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 68 -----L------LDEDFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp -----G------GGSCEEEEEECTTSCTTSHH
T ss_pred -----h------hcCCCCEEEECCcCCCCChh
Confidence 0 012 6999999999887654
No 471
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.29 E-value=0.2 Score=43.87 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=30.0
Q ss_pred cceeeecCCccHHHHHHHHHHCC-CeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLG-FKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g-~~V~liek~ 422 (866)
.+|+|+|+|..|...+..|.+.| ++|+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 57999999999999999999999 999999985
No 472
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=90.25 E-value=0.22 Score=56.34 Aligned_cols=61 Identities=28% Similarity=0.362 Sum_probs=46.9
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCCcc----------cHH--------HHHHHHHHHHHcCCEEE
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLNTV----------DEE--------IAKKAFHLLNKQGLNII 629 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~~~----------d~~--------~~~~l~~~l~~~GV~i~ 629 (866)
.+++|+|||+|.+|+.+|..|.+.|.+|+++++++++.... ..+ ....+.+.+++.|+++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 36789999999999999999999999999999987764321 001 13456777888888653
No 473
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=89.92 E-value=0.24 Score=54.94 Aligned_cols=35 Identities=31% Similarity=0.573 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS 603 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~ 603 (866)
..++|+|||||+.|+-+|..|++.|.+|+++++.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34689999999999999999999999999999876
No 474
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=89.77 E-value=0.16 Score=41.14 Aligned_cols=31 Identities=23% Similarity=0.346 Sum_probs=28.2
Q ss_pred ecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 50 PAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 50 ~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
+++.+|+|.++++++|+.|..|++|+.++..
T Consensus 11 ~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~ 41 (77)
T 2l5t_A 11 EGVTEGEIVRWDVKEGDMVEKDQDLVEVMTD 41 (77)
T ss_dssp SSCCCEEEEECSCCTTCEECSCCCCCEEESS
T ss_pred CCCccEEEEEEEeCCCCEECCCCEEEEEEcc
Confidence 3578999999999999999999999999864
No 475
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=89.71 E-value=0.17 Score=53.82 Aligned_cols=66 Identities=20% Similarity=0.161 Sum_probs=46.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHh--cCCcEEEEecCCcCCCc-------cc-HHHHHHHHHHHHHcCCEEEeCceEE
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRR--LGSEVTILEMSSNFLNT-------VD-EEIAKKAFHLLNKQGLNIILNTKIH 635 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~--~g~~Vtli~~~~~~l~~-------~d-~~~~~~l~~~l~~~GV~i~~~~~v~ 635 (866)
...|+|||+|+.|+-+|..|++ .|.+|+++++.+.+... ++ ..+...+.+.+++.|+++..+....
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~ 140 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYV 140 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCcce
Confidence 4579999999999999999974 59999999987754211 00 1112234556778899887765443
No 476
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=89.59 E-value=0.8 Score=41.75 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS 603 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~ 603 (866)
..++++|+|.|..|..+|..|.+.|.+|+++++.+
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 45789999999999999999999999999998853
No 477
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=89.34 E-value=0.31 Score=46.48 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=26.1
Q ss_pred EEEeCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEE
Q psy9583 22 NWHKKEGELVVRNENLIDIETDKVILELPAPQDGIINK 59 (866)
Q Consensus 22 ~w~~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~ 59 (866)
..+|++|+.|++||.||+-. .|-|..+|++.+
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d 53 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVD 53 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEE
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEEe
Confidence 56899999999999999753 677777787743
No 478
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=88.92 E-value=0.34 Score=53.58 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.6
Q ss_pred eEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 572 KLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 572 ~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
+|+|||||..|+-+|..|++.|.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999987654
No 479
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=88.83 E-value=0.34 Score=52.27 Aligned_cols=33 Identities=33% Similarity=0.582 Sum_probs=30.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSS 603 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~ 603 (866)
++|+|||||..|++.|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 480
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=88.77 E-value=0.33 Score=54.45 Aligned_cols=35 Identities=23% Similarity=0.466 Sum_probs=32.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCC--cEEEEecCCcC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGS--EVTILEMSSNF 605 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~--~Vtli~~~~~~ 605 (866)
++|+|||||.+|+-+|..|++.|. +|+++++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999987765
No 481
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.67 E-value=0.5 Score=43.97 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=33.1
Q ss_pred cCCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc
Q psy9583 568 NVPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604 (866)
Q Consensus 568 ~~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~ 604 (866)
...++++|+|+|.+|..++..|.+.|.+|+++.+.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3468999999999999999999999999999988654
No 482
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=88.56 E-value=0.35 Score=54.79 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=31.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhc-CCcEEEEecCCcCC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRL-GSEVTILEMSSNFL 606 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~-g~~Vtli~~~~~~l 606 (866)
-.|+|||||.+|+-+|..|++. |.+|+++++++++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 3699999999999999999874 99999999887764
No 483
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=88.52 E-value=0.33 Score=52.41 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=43.9
Q ss_pred CCCCeeeCCCeEEEEEec-ceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 26 KEGELVVRNENLIDIETD-KVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 26 ~~G~~v~~g~~l~~ve~~-k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
+.|+.-..-..-+.|+.+ .-...|.++.+|+|.++++++|+.|..|++|+.++..
T Consensus 36 ~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~ 91 (359)
T 3lnn_A 36 TRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSA 91 (359)
T ss_dssp EEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEECS
T ss_pred eecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChH
Confidence 333333344455677765 6678999999999999999999999999999999854
No 484
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=88.38 E-value=0.43 Score=39.63 Aligned_cols=30 Identities=20% Similarity=0.269 Sum_probs=27.3
Q ss_pred CCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 52 PQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 52 ~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
+.+|+|.++++++|+.|..|++|+.++...
T Consensus 17 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 46 (87)
T 3crk_C 17 MTMGTVQRWEKKVGEKLSEGDLLAEIETDX 46 (87)
T ss_dssp CCEEEEEEECSCTTCEECTTCEEEEEECSS
T ss_pred CCcEEEEEEEcCCCCEEcCCCEEEEEECCc
Confidence 468999999999999999999999999654
No 485
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.27 E-value=0.32 Score=44.25 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=30.0
Q ss_pred cceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 391 FDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 391 ~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
.+|+|+|+|..|...|..|.+.|++|+++|+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999985
No 486
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=88.23 E-value=0.44 Score=51.58 Aligned_cols=37 Identities=43% Similarity=0.779 Sum_probs=33.5
Q ss_pred CCCeEEEECCcHHHHHHHHHHHhcCCcEEEEecC-CcC
Q psy9583 569 VPKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS-SNF 605 (866)
Q Consensus 569 ~~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~-~~~ 605 (866)
.+.+|+|||+|..|+-+|..|.+.|.+|++++++ +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3578999999999999999999999999999998 554
No 487
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=88.18 E-value=0.28 Score=39.92 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=27.8
Q ss_pred cCCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 51 APQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 51 ~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
++.+|+|.++++++|+.|..|++|+.++...
T Consensus 12 ~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (79)
T 1ghj_A 12 SIADGTVATWHKKPGEAVKRDELIVDIETDK 42 (79)
T ss_dssp SCSCEEECCCSSCTTSEECSSCEEEEEECSS
T ss_pred CCCCEEEEEEEcCCCCEECCCCEEEEEEccc
Confidence 3579999999999999999999999998643
No 488
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=88.13 E-value=0.63 Score=37.81 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=26.1
Q ss_pred CeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 54 DGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 54 ~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
+|+|.++++++|+.|..|++|+.++...
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~ 41 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDK 41 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSS
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCC
Confidence 8999999999999999999999998643
No 489
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=88.01 E-value=0.42 Score=52.66 Aligned_cols=36 Identities=36% Similarity=0.597 Sum_probs=33.3
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcC-CcEEEEecCCcC
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLG-SEVTILEMSSNF 605 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g-~~Vtli~~~~~~ 605 (866)
..+|+|||+|..|+-+|..|++.| .+|+++++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 468999999999999999999999 899999998776
No 490
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=87.80 E-value=0.54 Score=50.21 Aligned_cols=55 Identities=16% Similarity=0.275 Sum_probs=42.6
Q ss_pred eCCCCeeeCCCeEEEEEecceeeEEecCCCeEEEEEeecCCCEEecCCEEEEEecC
Q psy9583 25 KKEGELVVRNENLIDIETDKVILELPAPQDGIINKIIITDGSIVTSNQVIALIDTD 80 (866)
Q Consensus 25 ~~~G~~v~~g~~l~~ve~~k~~~~i~~~~~G~~~~~~~~~g~~v~~g~~l~~~~~~ 80 (866)
++.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|..|++|+.++..
T Consensus 11 v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~ 65 (341)
T 3fpp_A 11 VRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPE 65 (341)
T ss_dssp --CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTCEECTTCEEEEECCH
T ss_pred EEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChH
Confidence 4455544444455677665 467899999999999999999999999999999853
No 491
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=87.68 E-value=0.42 Score=51.86 Aligned_cols=34 Identities=18% Similarity=0.406 Sum_probs=31.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCc
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSN 604 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~ 604 (866)
.+|+|||||..|+-+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3699999999999999999999999999998754
No 492
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=87.54 E-value=0.45 Score=54.10 Aligned_cols=35 Identities=37% Similarity=0.604 Sum_probs=32.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhcC-CcEEEEecCCcC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLG-SEVTILEMSSNF 605 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g-~~Vtli~~~~~~ 605 (866)
.+|+|||+|..|+-+|..|.+.| .+|+++++++++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 57999999999999999999999 999999987654
No 493
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=87.53 E-value=0.45 Score=53.16 Aligned_cols=37 Identities=11% Similarity=0.278 Sum_probs=34.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCCC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFLN 607 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l~ 607 (866)
.+|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 5799999999999999999999999999999988753
No 494
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=87.49 E-value=0.5 Score=53.23 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=33.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcCC
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNFL 606 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~l 606 (866)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 5689999999999999999999999999999887653
No 495
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.39 E-value=0.61 Score=39.70 Aligned_cols=29 Identities=28% Similarity=0.468 Sum_probs=26.7
Q ss_pred CCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 53 QDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 53 ~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
..|+|.++++++||.|..|++|+.++...
T Consensus 20 ~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K 48 (98)
T 2dnc_A 20 EEGNIVKWLKKEGEAVSAGDALCEIETDK 48 (98)
T ss_dssp SEECEEEESSCTTCEECTTSEEEEEECSS
T ss_pred ccEEEEEEEcCCCCEeCCCCEEEEEEccc
Confidence 58999999999999999999999999654
No 496
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=87.19 E-value=0.5 Score=50.84 Aligned_cols=33 Identities=39% Similarity=0.633 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecC
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS 602 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~ 602 (866)
..+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 357999999999999999999999999999975
No 497
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.19 E-value=0.31 Score=48.46 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=30.9
Q ss_pred ccceeeecCCccHHHHHHHHHHCCCeEEEEecc
Q psy9583 390 NFDVIVIGAGPGGYVASIRLAQLGFKTACIDEW 422 (866)
Q Consensus 390 ~~dVvIIGgG~AGl~aA~~L~~~g~~V~liek~ 422 (866)
...|+|||||..|...+..|.+.|.+|+||++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 478999999999999999999999999999875
No 498
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.19 E-value=1.2 Score=40.37 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhcCCcEEEEecC
Q psy9583 570 PKKLCIIGAGVIGLEIGSIWRRLGSEVTILEMS 602 (866)
Q Consensus 570 ~~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~ 602 (866)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 368999999999999999999999999999874
No 499
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=87.10 E-value=0.48 Score=53.90 Aligned_cols=35 Identities=20% Similarity=0.474 Sum_probs=32.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhcCCcEEEEecCCcC
Q psy9583 571 KKLCIIGAGVIGLEIGSIWRRLGSEVTILEMSSNF 605 (866)
Q Consensus 571 ~~vvVIGgG~~glE~A~~l~~~g~~Vtli~~~~~~ 605 (866)
.+|+|||||..|+-+|..|++.|.+|+++++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 57999999999999999999999999999998766
No 500
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=87.01 E-value=0.67 Score=39.01 Aligned_cols=30 Identities=13% Similarity=0.273 Sum_probs=27.2
Q ss_pred CCCeEEEEEeecCCCEEecCCEEEEEecCC
Q psy9583 52 PQDGIINKIIITDGSIVTSNQVIALIDTDI 81 (866)
Q Consensus 52 ~~~G~~~~~~~~~g~~v~~g~~l~~~~~~~ 81 (866)
..+|+|.++++++|+.|..|++|+.++...
T Consensus 16 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K 45 (93)
T 1k8m_A 16 IREVTVKEWYVKEGDTVSQFDSICEVQSDK 45 (93)
T ss_dssp SCCEEEEEECCCTTCEECSSSCCEEEECSS
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEEcCC
Confidence 368999999999999999999999998653
Done!