BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9584
(466 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OHB|A Chain A, Myoglobin Cavity Mutant I107w
Length = 154
Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
W+ AI+ L+
Sbjct: 108 WSEAIIHVLH 117
>pdb|1NZ2|A Chain A, K45e Variant Of Horse Heart Myoglobin
Length = 153
Score = 33.1 bits (74), Expect = 0.32, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L +++E K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDEFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|3HC9|A Chain A, Ferric Horse Heart Myoglobin; H64v Mutant
pdb|3HEP|A Chain A, Ferric Horse Heart Myoglobin; H64v Mutant, Nitrite
Modified
Length = 153
Score = 33.1 bits (74), Expect = 0.35, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL ++ + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKVGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|3H57|A Chain A, Myoglobin Cavity Mutant H64lv68n Deoxy Form
pdb|3H58|A Chain A, Myoglobin Cavity Mutant H64lv68n Met Form
Length = 154
Score = 33.1 bits (74), Expect = 0.35, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL +L +L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKLGVTNLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MNK|A Chain A, Interactions Among Residues Cd3, E7, E10 And E11 In
Myoglobins: Attempts To Simulate The O2 And Co Binding
Properties Of Aplysia Myoglobin
pdb|1MNK|B Chain B, Interactions Among Residues Cd3, E7, E10 And E11 In
Myoglobins: Attempts To Simulate The O2 And Co Binding
Properties Of Aplysia Myoglobin
Length = 153
Score = 33.1 bits (74), Expect = 0.36, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL ++ + +L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKVGNTTLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|1YMA|A Chain A, Structural Characterization Of Heme Ligation In The
His64-- >tyr Variant Of Myoglobin
Length = 153
Score = 32.3 bits (72), Expect = 0.60, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKYGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|1BJE|A Chain A, H64t Variant Of Myoglobin (Horse Heart) Recombinant Wild-
Type Complexed With Azide
pdb|1HSY|A Chain A, Origin Of The Ph-Dependent Spectroscopic Properties Of
Pentacoordinate Metmyoglobin Variants
Length = 153
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKTGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|3SF4|A Chain A, Crystal Structure Of The Complex Between The Conserved
Cell Polarity Proteins Inscuteable And Lgn
pdb|3SF4|B Chain B, Crystal Structure Of The Complex Between The Conserved
Cell Polarity Proteins Inscuteable And Lgn
pdb|3SF4|C Chain C, Crystal Structure Of The Complex Between The Conserved
Cell Polarity Proteins Inscuteable And Lgn
Length = 406
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 369 LGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILN 417
LG+ + +LGNH ++M+ ++++ ++ D +L A L DL +L
Sbjct: 313 LGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLG 361
>pdb|1OFJ|A Chain A, Recombinant Sperm Whale Myoglobin L29hH64LD122N MUTANT
(With Initiator Met)
Length = 154
Score = 32.0 bits (71), Expect = 0.67, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL +L L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKLGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1NZ3|A Chain A, K45e-K63e Variant Of Horse Heart Myoglobin
pdb|1NZ4|A Chain A, The Horse Heart Myoglobin Variant K45eK63E COMPLEXED WITH
Cadmium
pdb|1NZ5|A Chain A, The Horse Heart Myoglobin Variant K45eK63E COMPLEXED WITH
Manganese
Length = 153
Score = 32.0 bits (71), Expect = 0.67, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L +++E K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDEFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKEHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|2MGC|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|2MGD|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|2MGE|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
Length = 154
Score = 32.0 bits (71), Expect = 0.68, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL +L L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKLGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1OFK|A Chain A, Recombinant Sperm Whale Myoglobin F43h, H64l Mutant (Met)
Length = 154
Score = 32.0 bits (71), Expect = 0.69, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL +L L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKLGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|3HEN|A Chain A, Ferric Horse Heart Myoglobin; H64vV67R MUTANT
pdb|3HEO|A Chain A, Ferric Horse Heart Myoglobin; H64vV67R MUTANT, NITRITE
Modified
Length = 153
Score = 32.0 bits (71), Expect = 0.73, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL ++ + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKVGTRVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|1MNI|A Chain A, Alteration Of Axial Coordination By Protein Engineering In
Myoglobin. Bis-Imidazole Ligation In The His64--
>val(Slash)val68-->his Double Mutant
pdb|1MNI|B Chain B, Alteration Of Axial Coordination By Protein Engineering In
Myoglobin. Bis-Imidazole Ligation In The His64--
>val(Slash)val68-->his Double Mutant
Length = 153
Score = 32.0 bits (71), Expect = 0.73, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL ++ + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKVGNTHLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|3RJ6|A Chain A, Crystal Structure Of Horse Heart Ferric Myoglobin;
K45eK63EK96E Mutant
pdb|3RJ6|B Chain B, Crystal Structure Of Horse Heart Ferric Myoglobin;
K45eK63EK96E Mutant
Length = 153
Score = 32.0 bits (71), Expect = 0.74, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L +++E K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDEFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKEHGTVVLTALGGILKKKGHHEAELKPLAQSHATEHKIPIKYLEFISDAIIHVLH 116
>pdb|3O89|A Chain A, Crystal Structure Of Sperm Whale Myoglobin G65t
Length = 153
Score = 32.0 bits (71), Expect = 0.77, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + T L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHTVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|4H07|A Chain A, Complex Of G65t Myoglobin With Phenol In Its Proximal
Cavity
pdb|4H0B|A Chain A, Complex Of G65t Myoglobin With Dmso In Its Distal Cavity
Length = 154
Score = 32.0 bits (71), Expect = 0.79, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + T L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHTVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1HRM|A Chain A, The Proximal Ligand Variant His93tyr Of Horse Heart
Myoglobin
Length = 153
Score = 32.0 bits (71), Expect = 0.84, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSYATKHKIPIKYLEFISDAIIHVLH 116
>pdb|1O16|A Chain A, Recombinant Sperm Whale Myoglobin H64dV68SD122N MUTANT
(Met)
Length = 154
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + SL LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKDGVTSLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1DWR|A Chain A, Myoglobin (Horse Heart) Wild-Type Complexed With Co
pdb|1DWS|A Chain A, Photolyzed Carbonmonoxy Myoglobin (Horse Heart)
pdb|1DWT|A Chain A, Photorelaxed Horse Heart Myoglobin Co Complex
pdb|1GJN|A Chain A, Hydrogen Peroxide Derived Myoglobin Compound Ii At Ph 5.2
pdb|1NPF|A Chain A, Myoglobin (Horse Heart) Wild-Type Complexed With Nitric
Oxide
pdb|1NPG|A Chain A, Myoglobin (Horse Heart) Wild-Type Complexed With
Nitrosoethane
pdb|2FRF|A Chain A, Horse Heart Myoglobin, Nitrite Adduct, Crystal Soak
pdb|2FRI|X Chain X, Horse Heart Myoglobin, Nitrite Adduct, Co-crystallized
pdb|2FRJ|X Chain X, Nitrosyl Horse Heart Myoglobin, NitriteDITHIONITE METHOD
pdb|2FRK|X Chain X, Nitrosyl Horse Heart Myoglobin, Nitric Oxide Gas Method
pdb|2IN4|A Chain A, Crystal Structure Of Myoglobin With Charge Neutralized
Heme, Zndmb-Dme
pdb|2V1E|A Chain A, Crystal Structure Of Radiation-Induced Myoglobin Compound
Ii - Intermediate H At Ph 6.8
pdb|2V1F|A Chain A, Crystal Structure Of Radiation-Induced Myoglobin Compound
Ii - Intermediate H At Ph 8.7
pdb|2V1G|A Chain A, Crystal Structure Of Radiation-Induced Myoglobin Compound
Ii - Intermediate H At Ph 5.2
pdb|2V1H|A Chain A, Crystal Structure Of Radiation-Induced Metmyoglobin - Aqua
Ferrous Myoglobin At Ph 5.2
pdb|2V1I|A Chain A, Crystal Structure Of Radiation-Induced Metmyoglobin - Aqua
Ferrous Myoglobin At Ph 6.8
pdb|2V1J|A Chain A, Crystal Structure Of Radiation-Induced Metmyoglobin - Aqua
Ferrous Myoglobin At Ph 8.7
pdb|2V1K|A Chain A, Crystal Structure Of Ferrous Deoxymyoglobin At Ph 6.8
pdb|1AZI|A Chain A, Myoglobin (Horse Heart) Recombinant Wild-Type Complexed
With Azide
pdb|1WLA|A Chain A, Myoglobin (horse Heart) Recombinant Wild-type
pdb|1YMB|A Chain A, High Resolution Study Of The Three-Dimensional Structure
Of Horse Heart Metmyoglobin
pdb|1YMC|A Chain A, Three-Dimensional Structure Of Cyanomet-Sulfmyoglobin C
pdb|2O58|X Chain X, Horse Heart Met Manganese Myoglobin
pdb|2O5B|X Chain X, Manganese Horse Heart Myoglobin, Reduced
pdb|2O5L|X Chain X, Manganese Horse Heart Myoglobin, Methanol Modified
pdb|2O5M|X Chain X, Manganese Horse Heart Myoglobin, Azide Modified
pdb|2O5O|X Chain X, Manganese Horse Heart Myoglobin, Nitrite Modified
pdb|2O5Q|X Chain X, Manganese Horse Heart Myoglobin, Nitric Oxide Modified
pdb|2O5S|X Chain X, Cobalt Horse Heart Myoglobin, Nitrite Modified
pdb|2O5T|X Chain X, Cobalt Horse Heart Myoglobin, Oxidized
pdb|2NSR|A Chain A, Nitromethane Modified Horse Heart Myoglobin
pdb|2NSS|A Chain A, Nitrobenzene Modified Horse Heart Myoglobin
pdb|2VLY|A Chain A, Crystal Structure Of Myoglobin Compound Iii (Radiation-
Induced)
pdb|2VLZ|A Chain A, Crystal Structure Of Peroxymyoglobin Generated By
Cryoradiolytic Reduction Of Myoglobin Compound Iii
pdb|2VM0|A Chain A, Crystal Structure Of Radiation-Induced Myoglobin Compound
Ii Generated After Annealing Of Peroxymyoglobin
pdb|3BA2|A Chain A, Cyanide Bound Chlorin Substituted Myoglobin
pdb|2VLX|A Chain A, Crystal Structure Of Peroxymyoglobin Generated By
Cryoradiolytic Reduction Of Myoglobin Compound Iii
pdb|3LR7|A Chain A, Ferric Horse Heart Myoglobin, Nitrite Adduct
pdb|3LR9|A Chain A, X-Ray Photogenerated Ferrous Horse Heart Myoglobin,
Nitrite Adduct
pdb|3VAU|A Chain A, Myoglobin Nitrite Structure: Nitriheme Modified
pdb|3VM9|A Chain A, Dimeric Horse Myoglobin
pdb|3VM9|B Chain B, Dimeric Horse Myoglobin
pdb|3V2V|A Chain A, Nitrite Bound Chlorin Substituted Myoglobin- Method 1
pdb|3V2Z|A Chain A, Nitrite Bound Chlorin Substituted Myoglobin- Method 2
Length = 153
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|1MNJ|A Chain A, Interactions Among Residues Cd3, E7, E10 And E11 In
Myoglobins: Attempts To Simulate The O2 And Co Binding
Properties Of Aplysia Myoglobin
pdb|1MNJ|B Chain B, Interactions Among Residues Cd3, E7, E10 And E11 In
Myoglobins: Attempts To Simulate The O2 And Co Binding
Properties Of Aplysia Myoglobin
Length = 153
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL ++ + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKVGNTILTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|1MYJ|A Chain A, Distal Polarity In Ligand Binding To Myoglobin: Structural
And Functional Characterization Of A Threonine68(E11)
Mutant
pdb|1MYJ|B Chain B, Distal Polarity In Ligand Binding To Myoglobin: Structural
And Functional Characterization Of A Threonine68(E11)
Mutant
pdb|1YCA|A Chain A, Distal Pocket Polarity In Ligand Binding To Myoglobin:
Deoxy And Carbonmonoxy Forms Of A Threonine68 (E11)
Mutant Investigated By X-Ray Crystallography And
Infrared Spectroscopy
pdb|1YCA|B Chain B, Distal Pocket Polarity In Ligand Binding To Myoglobin:
Deoxy And Carbonmonoxy Forms Of A Threonine68 (E11)
Mutant Investigated By X-Ray Crystallography And
Infrared Spectroscopy
pdb|1YCB|A Chain A, Distal Pocket Polarity In Ligand Binding To Myoglobin:
Deoxy And Carbonmonoxy Forms Of A Threonine68 (E11)
Mutant Investigated By X-Ray Crystallography And
Infrared Spectroscopy
pdb|1YCB|B Chain B, Distal Pocket Polarity In Ligand Binding To Myoglobin:
Deoxy And Carbonmonoxy Forms Of A Threonine68 (E11)
Mutant Investigated By X-Ray Crystallography And
Infrared Spectroscopy
Length = 153
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + + +L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKHGNTTLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|4DC7|A Chain A, Crystal Structure Of Myoglobin Exposed To Excessive Sonicc
Imaging Laser Dose.
pdb|4DC8|A Chain A, Crystal Structure Of Myoglobin Unexposed To Excessive
Sonicc Imaging Laser Dose
Length = 152
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|1M6C|A Chain A, V68n Myoglobin With Co
pdb|1M6C|B Chain B, V68n Myoglobin With Co
pdb|1M6M|A Chain A, V68n Met Myoglobin
pdb|1M6M|B Chain B, V68n Met Myoglobin
pdb|1MDN|A Chain A, Wild Type Myoglobin With Co
pdb|1MDN|B Chain B, Wild Type Myoglobin With Co
pdb|1MNO|A Chain A, V68n Myoglobin Oxy Form
pdb|1MNO|B Chain B, V68n Myoglobin Oxy Form
Length = 153
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + + +L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKHGNTNLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|2MGJ|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
Length = 154
Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL ++ L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKVGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MNH|A Chain A, Interactions Among Residues Cd3, E7, E10 And E11 In
Myoglobins: Attempts To Simulate The O2 And Co Binding
Properties Of Aplysia Myoglobin
Length = 153
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL ++ + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKVGNRVLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|1CO9|A Chain A, Recombinant Sperm Whale Myoglobin L104v Mutant (Met)
Length = 154
Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +V+
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYVEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MLF|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLG|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLH|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
Length = 154
Score = 30.4 bits (67), Expect = 2.0, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + +L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTALTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|3QVQ|A Chain A, The Structure Of An Oleispira Antarctica Phosphodiesterase
Olei02445 In Complex With The Product
Sn-Glycerol-3-Phosphate
pdb|3QVQ|B Chain B, The Structure Of An Oleispira Antarctica Phosphodiesterase
Olei02445 In Complex With The Product
Sn-Glycerol-3-Phosphate
pdb|3QVQ|C Chain C, The Structure Of An Oleispira Antarctica Phosphodiesterase
Olei02445 In Complex With The Product
Sn-Glycerol-3-Phosphate
pdb|3QVQ|D Chain D, The Structure Of An Oleispira Antarctica Phosphodiesterase
Olei02445 In Complex With The Product
Sn-Glycerol-3-Phosphate
Length = 252
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 172 NWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSI---LTIMQPTWPSD 226
+W G +YQ+E + ++V G +KPC +++I + +++ WP D
Sbjct: 86 SWKGQEYQQETIPTLLEAIEVISQYGXGLNLELKPCEGLEEETIAASVEVLKQHWPQD 143
>pdb|1MLU|A Chain A, Nitric Oxide Recombination To Double Mutants Of Myoglobin:
The Role Of Ligand Diffusion In A Fluctuating Heme
Pocket
Length = 154
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + +L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKGGVTALTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1LUE|A Chain A, Recombinant Sperm Whale Myoglobin H64d/v68a/d122n Mutant
(met)
Length = 154
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + +L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKDGVTALTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1RSE|A Chain A, Myoglobin (horse Heart) Mutant With Ser 92 Replaced By Asp
(s92d)
Length = 153
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + KIP +++ + AI+ L+
Sbjct: 59 EDLKKHGTVVLTALGGILKKKGHHEAELKPLAQDHATKHKIPIKYLEFISDAIIHVLH 116
>pdb|3K9Z|A Chain A, Rational Design Of A Structural And Functional Nitric
Oxide Reductase
Length = 153
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 16/123 (13%)
Query: 291 IVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETL 350
++++ K E D A + I+ SH +L + ++L+
Sbjct: 10 VLHVWAKVEADVAGHGQDIHIRLFKSHPETLEKHDRF----------------KHLKTEA 53
Query: 351 KMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILK 410
+M +EDL + L LG I G+H + + + KIP +++ + AI+
Sbjct: 54 EMKASEDLKKHGVTELTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIH 113
Query: 411 DLY 413
L+
Sbjct: 114 VLH 116
>pdb|1WVP|A Chain A, Structure Of Chemically Modified Myoglobin With Distal N-
Tetrazolyl-Histidine E7(64)
Length = 153
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKXGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|1PMB|A Chain A, The Determination Of The Crystal Structure Of Recombinant
Pig Myoglobin By Molecular Replacement And Its
Refinement
pdb|1PMB|B Chain B, The Determination Of The Crystal Structure Of Recombinant
Pig Myoglobin By Molecular Replacement And Its
Refinement
pdb|1MYG|A Chain A, High Resolution X-Ray Structures Of Pig Metmyoglobin And
Two Cd3 Mutants Mb(Lys45-> Arg) And Mb(Lys45-> Ser)
pdb|1MYG|B Chain B, High Resolution X-Ray Structures Of Pig Metmyoglobin And
Two Cd3 Mutants Mb(Lys45-> Arg) And Mb(Lys45-> Ser)
pdb|1MWC|A Chain A, Wild Type Myoglobin With Co
pdb|1MWC|B Chain B, Wild Type Myoglobin With Co
pdb|1MWD|A Chain A, Wild Type Deoxy Myoglobin
pdb|1MWD|B Chain B, Wild Type Deoxy Myoglobin
Length = 153
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKHGNTVLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|1MYH|A Chain A, High Resolution X-ray Structures Of Pig Metmyoglobin And
Two Cd3 Mutants Mb(lys45-> Arg) And Mb(lys45-> Ser)
pdb|1MYH|B Chain B, High Resolution X-ray Structures Of Pig Metmyoglobin And
Two Cd3 Mutants Mb(lys45-> Arg) And Mb(lys45-> Ser)
Length = 153
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKHGNTVLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|3M38|A Chain A, The Roles Of Glutamates And Metal Ions In A Rationally
Designed Nitric Oxide Reductase Based On Myoglobin:
I107e Febmb (No Metal Ion Binding To Feb Site)
pdb|3M39|A Chain A, The Roles Of Glutamates And Metal Ions In A Rationally
Desig Oxide Reductase Based On Myoglobin: Fe(Ii)-I107e
Febmb (Fe( Binding To Feb Site)
pdb|3M3A|A Chain A, The Roles Of Glutamates And Metal Ions In A Rationally
Desig Oxide Reductase Based On Myoglobin: Cu(Ii)-I107e
Febmb (Cu( Binding To Feb Site)
pdb|3M3B|A Chain A, The Roles Of Glutamates And Metal Ions In A Rationally
Desig Oxide Reductase Based On Myoglobin: Zn(Ii)-I107e
Febmb (Zn( Binding To Feb Site)
Length = 153
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 16/123 (13%)
Query: 291 IVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETL 350
++++ K E D A + I+ SH +L + ++L+
Sbjct: 10 VLHVWAKVEADVAGHGQDIHIRLFKSHPETLEKHDRF----------------KHLKTEA 53
Query: 351 KMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILK 410
+M +EDL + L LG I G+H + + + KIP +++ + AI+
Sbjct: 54 EMKASEDLKKHGVTELTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEFESEAIIH 113
Query: 411 DLY 413
L+
Sbjct: 114 VLH 116
>pdb|2W6X|A Chain A, Crystal Structure Of Sperm Whale Myoglobin Mutant Yqrf In
Complex With Xenon
Length = 154
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKQGVRVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
++ AI+ L+
Sbjct: 108 FSEAIIHVLH 117
>pdb|1MYI|A Chain A, High Resolution X-Ray Structures Of Pig Metmyoglobin And
Two Cd3 Mutants Mb(Lys45-> Arg) And Mb(Lys45-> Ser)
pdb|1MYI|B Chain B, High Resolution X-Ray Structures Of Pig Metmyoglobin And
Two Cd3 Mutants Mb(Lys45-> Arg) And Mb(Lys45-> Ser)
Length = 153
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKHGNTVLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|3RGK|A Chain A, Crystal Structure Of Human Myoglobin Mutant K45r
Length = 153
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEF 106
Query: 404 WASAILKDL 412
+ AI++ L
Sbjct: 107 ISEAIIQVL 115
>pdb|3A2G|A Chain A, Crystal Structure Of K102c-Myoglobin Conjugated With
Fluorescein
Length = 154
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPICYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MGN|A Chain A, His64(E7)-> Tyr Apomyoglobin As A Reagent For Measuring
Rates Of Hemin Dissociation
Length = 154
Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKYGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MOC|A Chain A, High-Resolution Crystal Structures Of Distal Histidine
Mutants Of Sperm Whale Myoglobin
pdb|1MOD|A Chain A, High-Resolution Crystal Structures Of Distal Histidine
Mutants Of Sperm Whale Myoglobin
pdb|2MGI|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
Length = 154
Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKTGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1XCH|A Chain A, Myoglobin (Horse Heart) Mutant With Leu 104 Replaced By
Asn (L104n)
Length = 153
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 296 GKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355
GK E D A + + T H +L ++++ K +L+ +M +
Sbjct: 15 GKVEADIAGHGQEVLIRLFTGHPETLE---------------KFDKFK-HLKTEAEMKAS 58
Query: 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413
EDL + + L LG I G+H + + + KIP + + + AI+ L+
Sbjct: 59 EDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYNEFISDAIIHVLH 116
>pdb|102M|A Chain A, Sperm Whale Myoglobin H64a Aquomet At Ph 9.0
pdb|103M|A Chain A, Sperm Whale Myoglobin H64a N-Butyl Isocyanide At Ph 9.0
Length = 154
Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKAGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|3NML|A Chain A, Sperm Whale Myoglobin Mutant H64w Carbonmonoxy-Form
pdb|3OGB|A Chain A, Sperm Whale Myoglobin Mutant H64w Deoxy-Form
Length = 154
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKWGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MCY|A Chain A, Sperm Whale Myoglobin (Mutant With Initiator Met And With
His 64 Replaced By Gln, Leu 29 Replaced By Phe
Length = 154
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKQGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1FCS|A Chain A, Crystal Structure Of A Distal Site Double Mutant Of Sperm
Whale Myoglobin At 1.6 Angstroms Resolution
Length = 154
Score = 29.6 bits (65), Expect = 3.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL ++ L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKVGVRVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1DTI|A Chain A, Recombinant Sperm Whale Myoglobin H97d, D122n Mutant (Met)
Length = 154
Score = 29.6 bits (65), Expect = 3.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKDKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1CH9|A Chain A, Recombinant Sperm Whale Myoglobin H97q Mutant (Met)
Length = 154
Score = 29.6 bits (65), Expect = 3.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKQKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|3SDN|A Chain A, Structure Of G65i Sperm Whale Myoglobin Mutant
Length = 154
Score = 29.6 bits (65), Expect = 3.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHIVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2MGF|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|2MGG|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|2MGH|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
Length = 154
Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKQGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|4FWZ|A Chain A, Aquoferric Cub Myoglobin (L29h F43h Sperm Whale Myoglobin)
Length = 153
Score = 29.6 bits (65), Expect = 3.7, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 16/123 (13%)
Query: 291 IVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETL 350
++++ K E D A + I+ SH +L + ++L+
Sbjct: 10 VLHVWAKVEADVAGHGQDIHIRLFKSHPETLEKHDRF----------------KHLKTEA 53
Query: 351 KMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILK 410
+M +EDL + L LG I G+H + + + KIP +++ + AI+
Sbjct: 54 EMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIH 113
Query: 411 DLY 413
L+
Sbjct: 114 VLH 116
>pdb|1BZ6|A Chain A, Atomic Resolution Crystal Structure Aquomet-Myoglobin From
Sperm Whale At Room Temperature
pdb|1BZP|A Chain A, Atomic Resolution Crystal Structure Analysis Of Native
Deoxy And Co Myoglobin From Sperm Whale At Room
Temperature
pdb|1BZR|A Chain A, Atomic Resolution Crystal Structure Analysis Of Native
Deoxy And Co Myoglobin From Sperm Whale At Room
Temperature
pdb|1EBC|A Chain A, Sperm Whale Met-Myoglobin:cyanide Complex
pdb|1DUK|A Chain A, Wild-Type Recombinant Sperm Whale Metaquomyoglobin
pdb|1F6H|A Chain A, Combined Rietveld And Stereochemical Restraint Refinement
Of A Protein
pdb|1JP6|A Chain A, Sperm Whale Met-Myoglobin (Room Temperature; Room
Pressure)
pdb|1JP8|A Chain A, Sperm Whale Met-Myoglobin (Room Temperature; High
Pressure)
pdb|1JP9|A Chain A, Sperm Whale Met-Myoglobin (Low Temperature; High Pressure)
pdb|1JPB|A Chain A, Sperm Whale Met-Myoglobin (Low Temperature; High Pressure)
pdb|1L2K|A Chain A, Neutron Structure Determination Of Sperm Whale
Met-Myoglobin At 1.5a Resolution.
pdb|1U7R|A Chain A, Crystal Structure Of Native Sperm Whale Myoglobin From Low
Ionic Strength Enviroment (form2 )
pdb|1U7S|A Chain A, Crystal Structure Of Native Sperm Whale Myoglobin From Low
Ionic Strength Enviroment (form 1)
pdb|2D6C|A Chain A, Crystal Structure Of Myoglobin Reconstituted With Iron
Porphycene
pdb|2D6C|B Chain B, Crystal Structure Of Myoglobin Reconstituted With Iron
Porphycene
pdb|104M|A Chain A, Sperm Whale Myoglobin N-Butyl Isocyanide At Ph 7.0
pdb|105M|A Chain A, Sperm Whale Myoglobin N-Butyl Isocyanide At Ph 9.0
pdb|1AJG|A Chain A, Carbonmonoxy Myoglobin At 40 K
pdb|1AJH|A Chain A, Photoproduct Of Carbonmonoxy Myoglobin At 40 K
pdb|1BVC|A Chain A, Structure Of A Biliverdin Apomyoglobin Complex (Form D) At
118 K
pdb|1BVD|A Chain A, Structure Of A Biliverdin Apomyoglobin Complex (Form B) At
98 K
pdb|1HJT|A Chain A, Sperm Whale Myoglobin (Ferrous, Nitric Oxide Bound)
pdb|1IOP|A Chain A, Incorporation Of A Hemin With The Shortest Acid
Side-Chains Into Myoglobin
pdb|1MBC|A Chain A, X-Ray Structure And Refinement Of Carbon-Monoxy (Fe Ii)-
Myoglobin At 1.5 Angstroms Resolution
pdb|1MBD|A Chain A, Neutron Diffraction Reveals Oxygen-Histidine Hydrogen Bond
In Oxymyoglobin
pdb|1MBI|A Chain A, X-Ray Crystal Structure Of The Ferric Sperm Whale
Myoglobin: Imidazole Complex At 2.0 Angstroms Resolution
pdb|1MBN|A Chain A, The Stereochemistry Of The Protein Myoglobin
pdb|1MBO|A Chain A, Structure And Refinement Of Oxymyoglobin At 1.6 Angstroms
Resolution
pdb|1SPE|A Chain A, Sperm Whale Native Co Myoglobin At Ph 4.0, Temp 4c
pdb|1SWM|A Chain A, X-Ray Crystal Structure Of The Ferric Sperm Whale
Myoglobin: Imidazole Complex At 2.0 Angstroms Resolution
pdb|1VXA|A Chain A, Native Sperm Whale Myoglobin
pdb|1VXB|A Chain A, Native Sperm Whale Myoglobin
pdb|1VXC|A Chain A, Native Sperm Whale Myoglobin
pdb|1VXD|A Chain A, Native Sperm Whale Myoglobin
pdb|1VXE|A Chain A, Native Sperm Whale Myoglobin
pdb|1VXF|A Chain A, Native Sperm Whale Myoglobin
pdb|1VXG|A Chain A, Native Sperm Whale Myoglobin
pdb|1VXH|A Chain A, Native Sperm Whale Myoglobin
pdb|1YOG|A Chain A, Cobalt Myoglobin (Deoxy)
pdb|1YOH|A Chain A, Cobalt Myoglobin (Met)
pdb|1YOI|A Chain A, Cobalt Myoglobin (Oxy)
pdb|2CMM|A Chain A, Structural Analysis Of The Myoglobin Reconstituted With
Iron Porphine
pdb|2EKT|A Chain A, Crystal Structure Of Myoglobin Reconstituted With
6-Methyl-6- Depropionatehemin
pdb|2EKU|A Chain A, Crystal Structure Of Myoglobin Reconstituted With
7-Methyl-7- Depropionatehemin
pdb|2MYA|A Chain A, High Resolution X-Ray Structures Of Myoglobin-And
Hemoglobin-Alkyl Isocyanide Complexes
pdb|2MYB|A Chain A, High Resolution X-Ray Structures Of Myoglobin-And
Hemoglobin-Alkyl Isocyanide Complexes
pdb|2MYC|A Chain A, High Resolution X-Ray Structures Of Myoglobin-And
Hemoglobin-Alkyl Isocyanide Complexes
pdb|2MYD|A Chain A, High Resolution X-ray Structures Of Myoglobin-and
Hemoglobin-alkyl Isocyanide Complexes
pdb|2MYE|A Chain A, High Resolution X-Ray Structures Of Myoglobin-And
Hemoglobin-Alkyl Isocyanide Complexes
pdb|4MBN|A Chain A, Refinement Of Myoglobin And Cytochrome C
pdb|5MBN|A Chain A, Refinement Of Myoglobin And Cytochrome C
pdb|1MYF|A Chain A, Solution Structure Of Carbonmonoxy Myoglobin Determined
From Nmr Distance And Chemical Shift Constraints
pdb|2Z6S|A Chain A, Crystal Structure Of The Oxy Myoglobin Free From X-ray-
Induced Photoreduction
pdb|2Z6T|A Chain A, Crystal Structure Of The Ferric Peroxo Myoglobin
pdb|2ZSN|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser On [300
Min]
pdb|2ZSO|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser On [450
Min]
pdb|2ZSP|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser On [300
Min]
pdb|2ZSQ|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 140 K: Laser On [150
Min]
pdb|2ZSR|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser On [450
Min]
pdb|2ZSS|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 140 K: Laser On [300
Min]
pdb|2ZST|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 140 K: Laser On [450
Min]
pdb|2ZSX|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 140 K: Laser On [600
Min]
pdb|2ZSY|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 140 K: Laser On [750
Min]
pdb|2ZSZ|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser On [600
Min]
pdb|2ZT0|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser On [750
Min]
pdb|2ZT1|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser On [810
Min]
pdb|2ZT2|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser On [600
Min]
pdb|2ZT3|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser On [750
Min]
pdb|2ZT4|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser On [810
Min]
pdb|3E4N|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 40 K: Laser Off
pdb|3E55|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser Off
pdb|3E5I|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser Off
pdb|3E5O|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 140 K: Laser Off
pdb|3ECL|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 40 K: Laser On
pdb|3ECX|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser On [30
Min]
pdb|3ECZ|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser On [30
Min]
pdb|3ED9|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 140 K: Laser On [30
Min]
pdb|3EDA|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 100 K: Laser On [150
Min]
pdb|3EDB|A Chain A, Carbonmonoxy Sperm Whale Myoglobin At 120 K: Laser On [150
Min]
pdb|1CQ2|A Chain A, Neutron Struture Of Fully Deuterated Sperm Whale Myoglobin
At 2.0 Angstrom
Length = 153
Score = 29.6 bits (65), Expect = 4.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|101M|A Chain A, Sperm Whale Myoglobin F46v N-Butyl Isocyanide At Ph 9.0
pdb|1MTJ|A Chain A, Phe46(Cd4) Orients The Distal Histidine For Hydrogen
Bonding To Bound Ligands In Sperm Whale Myoglobin
pdb|1MTK|A Chain A, Phe46(cd4) Orients The Distal Histidine For Hydrogen
Bonding To Bound Ligands In Sperm Whale Myoglobin
pdb|1MYM|A Chain A, Structural Determinants Of Co Stretching Vibration
Frequencies In Myoglobin
Length = 154
Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1A6G|A Chain A, Carbonmonoxy-Myoglobin, Atomic Resolution
Length = 151
Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|1JW8|A Chain A, 1.3 Angstrom Resolution Crystal Structure Of P6 Form Of
Myoglobin
pdb|1J52|A Chain A, Recombinant Sperm Whale Myoglobin In The Presence Of 7atm
Xenon
pdb|109M|A Chain A, Sperm Whale Myoglobin D122n Ethyl Isocyanide At Ph 9.0
pdb|110M|A Chain A, Sperm Whale Myoglobin D122n Methyl Isocyanide At Ph 9.0
pdb|111M|A Chain A, Sperm Whale Myoglobin D122n N-Butyl Isocyanide At Ph 9.0
pdb|112M|A Chain A, Sperm Whale Myoglobin D122n N-Propyl Isocyanide At Ph 9.0
pdb|1ABS|A Chain A, Photolysed Carbonmonoxy-Myoglobin At 20 K
pdb|1TES|A Chain A, Oxygen Binding Muscle Protein
pdb|2MBW|A Chain A, Recombinant Sperm Whale Myoglobin (Met)
pdb|2MGK|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|2MGL|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|2MGM|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|3ASE|A Chain A, Crystal Structure Of Zinc Myoglobin Soaked With Ru3o
Cluster
Length = 154
Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2MB5|A Chain A, Hydration In Protein Crystals. A Neutron Diffraction
Analysis Of Carbonmonoxymyoglobin
Length = 153
Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|2OH8|A Chain A, Myoglobin Cavity Mutant I28w
Length = 154
Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2OHA|A Chain A, Myoglobin Cavity Mutant F138w
Length = 154
Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|4FWX|A Chain A, Aquoferric F33y Cub Myoglobin (F33y L29h F43h Sperm Whale
Myoglobin)
pdb|4FWY|A Chain A, F33y Cub Myoglobin (F33y L29h F43h Sperm Whale Myoglobin)
With Copper Bound
Length = 153
Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|1UFP|A Chain A, Crystal Structure Of An Artificial
Metalloprotein:fe(Iii)(3, 3'-Me2-Salophen)APO-Wild Type
Myoglobin
pdb|2JHO|A Chain A, Cyanomet Sperm Whale Myoglobin At 1.4a Resolution
pdb|2EB8|A Chain A, Crystal Structure Of Cu(Ii)(Sal-Phe)APO-Myoglobin
pdb|2EB9|A Chain A, Crystal Structure Of Cu(ii)(sal-leu)/apo-myoglobin
pdb|2W6W|A Chain A, Crystal Structure Of Recombinant Sperm Whale Myoglobin
Under 1atm Of Xenon
pdb|3U3E|A Chain A, Complex Of Wild Type Myoglobin With Phenol In Its Proximal
Cavity
Length = 154
Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MTI|A Chain A, Phe46(Cd4) Orients The Distal Histidine For Hydrogen
Bonding To Bound Ligands In Sperm Whale Myoglobin
Length = 154
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1LTW|A Chain A, Recombinant Sperm Whale Myoglobin 29w Mutant (oxy)
Length = 154
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2BLH|A Chain A, Ligand Migration And Protein Fluctuations In Myoglobin
Mutant L29w
pdb|2BLI|A Chain A, L29w Mb Deoxy
pdb|2BLJ|M Chain M, Structure Of L29w Mbco
pdb|2BW9|M Chain M, Laue Structure Of L29w Mbco
pdb|2BWH|A Chain A, Laue Structure Of A Short Lived State Of L29w Myoglobin
Length = 153
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|2G0R|A Chain A, Unphotolyzed Co-bound L29f Myoglobin
pdb|2G0S|A Chain A, Unphotolyzed Co-Bound L29f Myoglobin, Crystal 2
pdb|2G0V|A Chain A, Photolyzed Co L29f Myoglobin: 100ps
pdb|2G0X|A Chain A, Photolyzed Co L29f Myoglobin: 316ps
pdb|2G0Z|A Chain A, Photolyzed Co L29f Myoglobin: 1ns
pdb|2G10|A Chain A, Photolyzed Co L29f Myoglobin: 3.16ns
pdb|2G11|A Chain A, Photolyzed Co L29f Myoglobin: 31.6ns
pdb|2G12|A Chain A, Photolyzed Co L29f Myoglobin: 316ns
pdb|2G14|A Chain A, Photolyzed Co L29f Myoglobin: 3.16us
pdb|1JDO|A Chain A, Sperm Whale Myoglobin (Ferrous, Nitric Oxide Bound)
pdb|1MOA|A Chain A, A Novel Site-Directed Mutant Of Myoglobin With An
Unusually High O2 Affinity And Low Autooxidation Rate
pdb|2SPL|A Chain A, A Novel Site-Directed Mutant Of Myoglobin With An
Unusually High O2 Affinity And Low Autooxidation Rate
pdb|2SPM|A Chain A, A Novel Site-Directed Mutant Of Myoglobin With An
Unusually High O2 Affinity And Low Autooxidation Rate
pdb|2SPN|A Chain A, A Novel Site-Directed Mutant Of Myoglobin With An
Unusually High O2 Affinity And Low Autooxidation Rate
Length = 154
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1DO1|A Chain A, Carbonmonoxy-Myoglobin Mutant L29w At 105k
pdb|1DO3|A Chain A, Carbonmonoxy-Myoglobin (Mutant L29w) After Photolysis At
T>180k
pdb|1DO4|A Chain A, Carbonmonoxy-Myoglobin (Mutant L29w) After Photolysis At
T<180k
pdb|1DO7|A Chain A, Carbonmonoxy-Myoglobin (Mutant L29w) Rebinding Structure
After Photolysis At T< 180k
Length = 154
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|3MN0|A Chain A, Introducing A 2-His-1-Glu Non-Heme Iron Center Into
Myoglobin Confers Nitric Oxide Reductase Activity:
Cu(Ii)-Cn-Febmb(-His) Form
Length = 153
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|1A6K|A Chain A, Aquomet-Myoglobin, Atomic Resolution
pdb|1A6M|A Chain A, Oxy-Myoglobin, Atomic Resolution
pdb|1A6N|A Chain A, Deoxy-Myoglobin, Atomic Resolution
Length = 151
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|2SPO|A Chain A, A Novel Site-directed Mutant Of Myoglobin With An
Unusually High O2 Affinity And Low Autooxidation Rate
Length = 154
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1OBM|A Chain A, Recombinant Sperm Whale Myoglobin 29f64Q68F122N MUTANT
(Met)
Length = 154
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKQGVTFLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MBS|A Chain A, X-Ray Crystallographic Studies Of Seal Myoglobin. The
Molecule At 2.5 Angstroms Resolution
Length = 153
Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ M +EDL + + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKSEDDMRRSEDLRKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|1MOB|A Chain A, High-Resolution Crystal Structures Of Distal Histidine
Mutants Of Sperm Whale Myoglobin
pdb|2MGA|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
pdb|2MGB|A Chain A, High Resolution Crystal Structures Of Five Distal
Histidine Mutants Of Sperm Whale Myoglobin
Length = 154
Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKGGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1DTM|A Chain A, Crystal Structure Of The Sperm-Whale Myoglobin Mutant H93g
Complexed With 4-Methylimidazole, Metaquo Form
pdb|1DUO|A Chain A, Sperm Whale Metaquomyoglobin Proximal Histidine Mutant
H93g With 1-Methylimidazole As Proximal Ligand.
pdb|2EVP|A Chain A, The Structures Of Thiolate- And Carboxylate-Ligated Ferric
H93g Myoglobin: Models For Cytochrome P450 And For
Oxyanion-Bound Heme Proteins
pdb|2EVK|A Chain A, The Structures Of Thiolate- And Carboxylate-Ligated Ferric
H93g Myoglobin: Models For Cytochrome P450 And For
Oxyanion-Bound Heme Proteins
Length = 153
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 47 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSGATKHKIPIKYLEF 106
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 107 ISEAIIHVLH 116
>pdb|1IRC|A Chain A, Cysteine Rich Intestinal Protein
Length = 154
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSGATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MLM|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLN|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLO|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
Length = 154
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTILTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|106M|A Chain A, Sperm Whale Myoglobin V68f Ethyl Isocyanide At Ph 9.0
pdb|107M|A Chain A, Sperm Whale Myoglobin V68f N-Butyl Isocyanide At Ph 9.0
pdb|108M|A Chain A, Sperm Whale Myoglobin V68f N-Butyl Isocyanide At Ph 7.0
pdb|1MLJ|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLK|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLL|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
Length = 154
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTFLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1CH5|A Chain A, Recombinant Sperm Whale Myoglobin H97v Mutant (Met)
Length = 154
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKVKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1MLQ|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLR|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
pdb|1MLS|A Chain A, Structural And Functional Effects Of Apolar Mutations Of
Val68(E11) In Myoglobin
Length = 154
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTLLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2OH9|A Chain A, Myoglobin Cavity Mutant V68w
Length = 154
Score = 28.9 bits (63), Expect = 5.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTWLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1CO8|A Chain A, Recombinant Sperm Whale Myoglobin L104a Mutant (Met)
Length = 154
Score = 28.9 bits (63), Expect = 5.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP + +
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYAEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2E2Y|A Chain A, Crystal Structure Of F43wH64DV68I MYOGLOBIN
Length = 154
Score = 28.9 bits (63), Expect = 6.1, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKDGVTILTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1CIO|A Chain A, Recombinant Sperm Whale Myoglobin I99v Mutant (Met)
Length = 154
Score = 28.9 bits (63), Expect = 6.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + K+P +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKVPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1CH7|A Chain A, Recombinant Sperm Whale Myoglobin H97f Mutant (Met)
Length = 154
Score = 28.9 bits (63), Expect = 6.7, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKFKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2W6Y|A Chain A, Crystal Structure Of Sperm Whale Myoglobin Mutant Yqr In
Complex With Xenon
Length = 154
Score = 28.9 bits (63), Expect = 7.1, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKQGVRVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1QBB|A Chain A, Bacterial Chitobiase Complexed With Chitobiose (Dinag)
pdb|1QBA|A Chain A, Bacterial Chitobiase, Glycosyl Hydrolase Family 20
Length = 858
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 69 AELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVD 128
A+ + +++ + P RA +S + Y ++HA K+ E L D
Sbjct: 409 AQARQIEVIPEIDMPAHARAAVVSMEARY---------KKLHAAGKEQEANEFRLVDPTD 459
Query: 129 YANISNAQYTRVLFLLSRCM---LLLIDKKVNDAVQLLTQAGYQVENW 173
+N ++ Q+ L+ C+ +DK + + Q+ +AG ++ W
Sbjct: 460 TSNTTSVQFFNRQSYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTW 507
>pdb|1CP5|A Chain A, Recombinant Sperm Whale Myoglobin L104f Mutant (Met)
Length = 154
Score = 28.9 bits (63), Expect = 7.2, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP + +
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYFEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1CH2|A Chain A, Recombinant Sperm Whale Myoglobin L89f Mutant (Met)
Length = 154
Score = 28.9 bits (63), Expect = 7.2, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPFAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 331 LQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAM 390
L ++ + L L + ED +RLTS L+ + HI L G H ++N++ M
Sbjct: 218 LSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAG-HETTVNLIANGM 276
Query: 391 QLASKIPDVHVQLWASAILKD 411
PD L A L D
Sbjct: 277 YALLSHPDQLAALRADMTLLD 297
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 331 LQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAM 390
L ++ + L L + ED +RLTS L+ + HI L G H ++N++ M
Sbjct: 218 LSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAG-HETTVNLIANGM 276
Query: 391 QLASKIPDVHVQLWASAILKD 411
PD L A L D
Sbjct: 277 YALLSHPDQLAALRADMTLLD 297
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 331 LQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAM 390
L ++ + L L + ED +RLTS L+ + HI L G H ++N++ M
Sbjct: 218 LSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAG-HETTVNLIANGM 276
Query: 391 QLASKIPDVHVQLWASAILKD 411
PD L A L D
Sbjct: 277 YALLSHPDQLAALRADMTLLD 297
>pdb|1DXC|A Chain A, Co Complex Of Myoglobin Mb-Yqr At 100k
pdb|1DXD|A Chain A, Photolyzed Co Complex Of Myoglobin Mb-Yqr At 20k
pdb|1F63|A Chain A, Crystal Structure Of Deoxy Sperm Whale Myoglobin Mutant
Y(B10)q(E7)r(E10)
pdb|1F65|A Chain A, Crystal Structure Of Oxy Sperm Whale Myoglobin Mutant
Y(B10)q(E7)r(E10)
pdb|1N9F|A Chain A, Structure Of Earth-Grown Oxidized Myoglobin Mutant Yqr
(Iss6a)
pdb|1N9H|A Chain A, Structure Of Microgravity-Grown Oxidized Myoglobin Mutant
Yqr (Iss6a)
pdb|1N9I|A Chain A, Structure Of Earth-Grown Oxidized Myoglobin Mutant Yqr
(Iss8a)
pdb|1N9X|A Chain A, Structure Of Microgravity-Grown Oxidized Myoglobin Mutant
Yqr (Iss8a)
pdb|1NAZ|A Chain A, Structure Of Microgravity-Grown Oxidized Myoglobin Mutant
Yqr (Iss8a)
pdb|1MYZ|A Chain A, Co Complex Of Myoglobin Mb-yqr At Rt Solved From Laue
Data.
pdb|1MZ0|A Chain A, Structure Of Myoglobin Mb-yqr 316 Ns After Photolysis Of
Carbon Monoxide Solved From Laue Data At Rt
Length = 154
Score = 28.5 bits (62), Expect = 7.7, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403
++L+ +M +EDL + L LG I G+H + + + KIP +++
Sbjct: 48 KHLKTEAEMKASEDLKKQGVRVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEF 107
Query: 404 WASAILKDLY 413
+ AI+ L+
Sbjct: 108 ISEAIIHVLH 117
>pdb|1C7S|A Chain A, Beta-N-Acetylhexosaminidase Mutant D539a Complexed With
Di- N-Acetyl-Beta-D-Glucosamine (Chitobiase)
Length = 858
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 69 AELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVD 128
A+ + +++ + P RA +S + Y ++HA K+ E L D
Sbjct: 409 AQARQIEVIPEIDMPAHARAAVVSMEARY---------KKLHAAGKEQEANEFRLVDQTD 459
Query: 129 YANISNAQYTRVLFLLSRCM---LLLIDKKVNDAVQLLTQAGYQVENW 173
+N ++ Q+ L+ C+ +DK + + Q+ +AG ++ W
Sbjct: 460 TSNTTSVQFFNRQSYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTW 507
>pdb|1C7T|A Chain A, Beta-N-Acetylhexosaminidase Mutant E540d Complexed With
Di- N Acetyl-D-Glucosamine (Chitobiase)
Length = 858
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 69 AELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVD 128
A+ + +++ + P RA +S + Y ++HA K+ E L D
Sbjct: 409 AQARQIEVIPEIDMPAHARAAVVSMEARY---------KKLHAAGKEQEANEFRLVDQTD 459
Query: 129 YANISNAQYTRVLFLLSRCM---LLLIDKKVNDAVQLLTQAGYQVENW 173
+N ++ Q+ L+ C+ +DK + + Q+ +AG ++ W
Sbjct: 460 TSNTTSVQFFNRQSYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTW 507
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,680,498
Number of Sequences: 62578
Number of extensions: 473214
Number of successful extensions: 1171
Number of sequences better than 100.0: 95
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1084
Number of HSP's gapped (non-prelim): 98
length of query: 466
length of database: 14,973,337
effective HSP length: 102
effective length of query: 364
effective length of database: 8,590,381
effective search space: 3126898684
effective search space used: 3126898684
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)