Query psy9584
Match_columns 466
No_of_seqs 82 out of 84
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 23:25:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9584.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9584hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sf4_A G-protein-signaling mod 99.8 2.3E-16 7.9E-21 155.6 32.0 347 19-435 8-380 (406)
2 4a1s_A PINS, partner of inscut 99.8 4.3E-15 1.5E-19 148.2 35.2 332 17-443 45-383 (411)
3 3ro2_A PINS homolog, G-protein 99.7 2E-14 6.8E-19 136.4 33.4 309 61-435 4-335 (338)
4 3sf4_A G-protein-signaling mod 99.7 3.5E-14 1.2E-18 139.9 33.7 312 59-436 6-340 (406)
5 3ro2_A PINS homolog, G-protein 99.7 1.6E-13 5.4E-18 130.2 32.8 304 21-398 6-338 (338)
6 4a1s_A PINS, partner of inscut 99.7 3.8E-14 1.3E-18 141.3 29.6 292 2-401 67-381 (411)
7 3ulq_A Response regulator aspa 99.5 1.2E-11 4.1E-16 123.7 32.5 325 32-436 23-372 (383)
8 3q15_A PSP28, response regulat 99.5 1.7E-11 5.7E-16 122.8 32.7 273 15-438 96-371 (378)
9 1hz4_A MALT regulatory protein 99.5 9.7E-10 3.3E-14 108.7 38.6 333 15-416 9-346 (373)
10 3ulq_A Response regulator aspa 99.4 1E-10 3.6E-15 116.8 28.7 268 18-398 101-374 (383)
11 3ieg_A DNAJ homolog subfamily 99.4 4.6E-09 1.6E-13 100.8 35.1 321 19-431 2-334 (359)
12 3q15_A PSP28, response regulat 99.3 8.6E-10 2.9E-14 110.3 29.2 288 33-427 24-327 (378)
13 1w3b_A UDP-N-acetylglucosamine 99.3 2.9E-09 9.9E-14 105.7 32.4 340 2-430 18-366 (388)
14 1hz4_A MALT regulatory protein 99.3 4E-09 1.4E-13 104.3 32.0 310 58-434 10-324 (373)
15 4eqf_A PEX5-related protein; a 99.3 1.3E-09 4.4E-14 107.1 24.6 289 4-424 48-348 (365)
16 2gw1_A Mitochondrial precursor 99.3 8.7E-09 3E-13 104.7 31.3 353 2-431 25-477 (514)
17 1fch_A Peroxisomal targeting s 99.2 1.4E-09 4.9E-14 106.0 24.1 301 2-427 44-354 (368)
18 2y4t_A DNAJ homolog subfamily 99.2 8.2E-08 2.8E-12 96.3 36.2 321 18-431 24-357 (450)
19 2gw1_A Mitochondrial precursor 99.2 4.5E-08 1.5E-12 99.4 34.4 348 17-431 3-443 (514)
20 3fp2_A TPR repeat-containing p 99.2 2.6E-08 9.1E-13 102.1 29.4 346 19-431 24-456 (537)
21 3ieg_A DNAJ homolog subfamily 99.2 9.2E-08 3.1E-12 91.7 31.2 319 2-417 22-354 (359)
22 3fp2_A TPR repeat-containing p 99.1 4.5E-08 1.5E-12 100.4 29.6 354 1-433 43-492 (537)
23 3edt_B KLC 2, kinesin light ch 99.1 3.7E-09 1.3E-13 98.0 19.0 258 34-392 14-281 (283)
24 2y4t_A DNAJ homolog subfamily 99.1 1.1E-07 3.9E-12 95.3 31.3 304 2-396 45-362 (450)
25 3ro3_A PINS homolog, G-protein 99.1 2.7E-09 9.3E-14 90.1 16.2 155 277-434 3-160 (164)
26 4g1t_A Interferon-induced prot 99.1 2.7E-08 9.2E-13 100.9 26.5 372 2-433 30-460 (472)
27 1w3b_A UDP-N-acetylglucosamine 99.1 2.3E-07 7.7E-12 91.9 31.7 312 32-428 10-330 (388)
28 3nf1_A KLC 1, kinesin light ch 99.1 4.6E-08 1.6E-12 92.3 25.3 266 59-432 24-307 (311)
29 3u4t_A TPR repeat-containing p 99.1 5.4E-08 1.8E-12 90.8 25.3 132 285-431 110-249 (272)
30 2xpi_A Anaphase-promoting comp 99.1 1.2E-07 4.2E-12 98.8 30.0 133 284-431 442-578 (597)
31 2xpi_A Anaphase-promoting comp 99.0 2.2E-07 7.6E-12 96.9 30.6 132 284-430 408-543 (597)
32 2ifu_A Gamma-SNAP; membrane fu 99.0 1.3E-07 4.5E-12 92.3 26.1 135 34-193 4-145 (307)
33 3hym_B Cell division cycle pro 99.0 1.3E-07 4.5E-12 89.9 25.4 265 22-428 24-295 (330)
34 3nf1_A KLC 1, kinesin light ch 99.0 1.2E-07 4E-12 89.4 24.4 199 97-395 24-227 (311)
35 3cv0_A Peroxisome targeting si 99.0 1.4E-07 4.8E-12 89.6 24.8 285 15-427 16-310 (327)
36 3uq3_A Heat shock protein STI1 99.0 4E-07 1.4E-11 83.4 26.3 229 61-398 4-242 (258)
37 3ro3_A PINS homolog, G-protein 99.0 5.7E-08 1.9E-12 81.9 18.9 124 15-140 4-129 (164)
38 3gw4_A Uncharacterized protein 98.9 5.2E-08 1.8E-12 86.8 17.3 158 276-437 19-181 (203)
39 3edt_B KLC 2, kinesin light ch 98.9 3.6E-07 1.2E-11 84.5 22.6 250 74-429 13-278 (283)
40 3gw4_A Uncharacterized protein 98.9 2.1E-07 7.1E-12 82.9 20.1 156 15-172 21-179 (203)
41 3hym_B Cell division cycle pro 98.9 2.5E-07 8.6E-12 88.0 21.2 277 2-421 41-323 (330)
42 1fch_A Peroxisomal targeting s 98.8 9.1E-08 3.1E-12 93.1 16.9 276 31-432 35-314 (368)
43 4g1t_A Interferon-induced prot 98.8 2.2E-06 7.6E-11 86.7 27.8 317 59-430 48-399 (472)
44 4eqf_A PEX5-related protein; a 98.8 7.4E-07 2.5E-11 87.3 23.2 244 61-433 64-311 (365)
45 1qqe_A Vesicular transport pro 98.8 1.7E-06 5.9E-11 83.8 24.5 104 68-193 43-148 (292)
46 3cv0_A Peroxisome targeting si 98.7 2.8E-06 9.7E-11 80.5 22.5 262 2-398 40-321 (327)
47 3u4t_A TPR repeat-containing p 98.6 3.4E-06 1.2E-10 78.4 19.9 241 21-394 4-252 (272)
48 3u3w_A Transcriptional activat 98.6 6.7E-07 2.3E-11 86.3 15.4 134 2-136 134-273 (293)
49 2qfc_A PLCR protein; TPR, HTH, 98.6 7.8E-07 2.7E-11 85.8 15.1 136 2-138 134-275 (293)
50 4b4t_Q 26S proteasome regulato 98.6 5.5E-06 1.9E-10 82.9 21.4 224 69-399 11-252 (434)
51 4b4t_Q 26S proteasome regulato 98.6 1.1E-06 3.7E-11 88.0 16.1 234 104-432 8-245 (434)
52 3uq3_A Heat shock protein STI1 98.6 5.9E-05 2E-09 68.7 26.2 232 17-355 2-239 (258)
53 2qfc_A PLCR protein; TPR, HTH, 98.5 7.4E-06 2.5E-10 78.9 20.7 173 262-437 85-271 (293)
54 1ouv_A Conserved hypothetical 98.5 1.4E-05 4.9E-10 75.2 22.3 94 20-129 6-107 (273)
55 2ifu_A Gamma-SNAP; membrane fu 98.5 2.3E-05 7.9E-10 76.3 24.2 188 15-211 30-221 (307)
56 2xm6_A Protein corresponding t 98.5 0.00056 1.9E-08 70.5 35.6 126 284-433 292-433 (490)
57 2xm6_A Protein corresponding t 98.5 0.0003 1E-08 72.6 33.0 320 19-430 38-394 (490)
58 1qqe_A Vesicular transport pro 98.5 1.7E-05 5.7E-10 76.7 21.7 187 17-210 33-224 (292)
59 1ouv_A Conserved hypothetical 98.5 3.3E-05 1.1E-09 72.7 22.9 228 62-433 6-252 (273)
60 3u3w_A Transcriptional activat 98.5 6.1E-06 2.1E-10 79.5 17.7 149 285-436 117-270 (293)
61 2ho1_A Type 4 fimbrial biogene 98.5 0.00016 5.5E-09 66.3 26.4 68 58-129 33-100 (252)
62 4abn_A Tetratricopeptide repea 98.4 9.3E-06 3.2E-10 84.7 19.9 236 39-426 79-315 (474)
63 1xnf_A Lipoprotein NLPI; TPR, 98.4 1.4E-05 5E-10 73.9 19.2 89 34-129 18-106 (275)
64 3qky_A Outer membrane assembly 98.3 2.4E-05 8.2E-10 73.4 18.1 169 2-177 34-229 (261)
65 1xnf_A Lipoprotein NLPI; TPR, 98.3 0.00016 5.3E-09 66.9 21.8 118 2-131 24-142 (275)
66 2pl2_A Hypothetical conserved 98.2 4.3E-05 1.5E-09 70.5 17.2 64 63-130 6-69 (217)
67 2q7f_A YRRB protein; TPR, prot 98.2 0.00013 4.3E-09 66.2 19.0 205 57-395 18-225 (243)
68 2ho1_A Type 4 fimbrial biogene 98.2 0.00038 1.3E-08 63.8 22.1 104 13-128 30-133 (252)
69 4gcn_A Protein STI-1; structur 98.1 5E-05 1.7E-09 64.4 12.7 104 18-129 6-112 (127)
70 2vq2_A PILW, putative fimbrial 98.0 0.0015 5E-08 58.0 22.4 127 285-429 78-208 (225)
71 3e4b_A ALGK; tetratricopeptide 98.0 0.00016 5.4E-09 74.8 18.0 105 24-151 7-119 (452)
72 4gyw_A UDP-N-acetylglucosamine 98.0 0.00011 3.9E-09 81.3 17.7 161 244-434 7-176 (723)
73 2pl2_A Hypothetical conserved 98.0 0.00021 7.3E-09 65.8 16.5 127 2-148 24-161 (217)
74 2h6f_A Protein farnesyltransfe 98.0 0.00043 1.5E-08 70.7 20.0 218 59-417 94-323 (382)
75 3mkr_A Coatomer subunit epsilo 98.0 0.0012 4.2E-08 64.0 22.3 84 32-128 10-93 (291)
76 4gcn_A Protein STI-1; structur 97.9 9.8E-05 3.4E-09 62.6 11.9 94 330-429 15-109 (127)
77 4i17_A Hypothetical protein; T 97.9 0.00052 1.8E-08 62.5 17.4 134 2-149 26-164 (228)
78 3vtx_A MAMA; tetratricopeptide 97.9 0.00066 2.2E-08 59.6 17.4 154 248-431 7-169 (184)
79 1hh8_A P67PHOX, NCF-2, neutrop 97.9 0.00026 8.9E-09 63.4 15.0 135 283-432 6-150 (213)
80 2q7f_A YRRB protein; TPR, prot 97.9 0.00092 3.2E-08 60.4 18.5 180 1-212 41-220 (243)
81 3as5_A MAMA; tetratricopeptide 97.9 0.0021 7.3E-08 54.8 19.8 128 283-431 42-172 (186)
82 3sz7_A HSC70 cochaperone (SGT) 97.9 0.0003 1E-08 61.2 14.3 110 15-136 6-115 (164)
83 3vtx_A MAMA; tetratricopeptide 97.8 0.00069 2.3E-08 59.4 16.2 113 20-148 5-117 (184)
84 1a17_A Serine/threonine protei 97.8 0.00069 2.4E-08 57.5 15.5 104 16-131 9-112 (166)
85 3as5_A MAMA; tetratricopeptide 97.8 0.00088 3E-08 57.2 16.0 137 277-431 2-138 (186)
86 1a17_A Serine/threonine protei 97.8 0.00073 2.5E-08 57.4 15.1 137 280-435 10-149 (166)
87 1elr_A TPR2A-domain of HOP; HO 97.8 0.00069 2.4E-08 54.7 14.0 104 19-130 3-109 (131)
88 3upv_A Heat shock protein STI1 97.8 0.00038 1.3E-08 57.6 12.5 102 19-132 3-104 (126)
89 4gyw_A UDP-N-acetylglucosamine 97.7 0.00022 7.4E-09 79.1 13.7 127 283-430 9-138 (723)
90 1elr_A TPR2A-domain of HOP; HO 97.7 0.00092 3.1E-08 53.9 14.1 100 327-432 8-108 (131)
91 3qky_A Outer membrane assembly 97.7 0.0023 8E-08 59.6 18.6 159 262-429 25-221 (261)
92 4i17_A Hypothetical protein; T 97.7 0.00088 3E-08 61.0 15.2 133 284-431 8-145 (228)
93 4ga2_A E3 SUMO-protein ligase 97.7 0.00016 5.5E-09 63.0 9.8 115 2-131 16-131 (150)
94 4gco_A Protein STI-1; structur 97.7 0.00045 1.6E-08 58.5 12.0 100 19-130 12-111 (126)
95 3rkv_A Putative peptidylprolyl 97.7 0.00077 2.6E-08 58.5 13.6 109 18-131 9-128 (162)
96 2e2e_A Formate-dependent nitri 97.7 0.00098 3.4E-08 58.3 14.3 118 1-133 28-148 (177)
97 2fo7_A Synthetic consensus TPR 97.6 0.003 1E-07 50.5 16.1 124 285-429 3-129 (136)
98 2vyi_A SGTA protein; chaperone 97.6 0.0021 7.2E-08 51.6 15.0 104 16-131 8-111 (131)
99 2fbn_A 70 kDa peptidylprolyl i 97.6 0.0011 3.6E-08 59.6 14.2 109 18-131 36-153 (198)
100 2h6f_A Protein farnesyltransfe 97.6 0.0048 1.6E-07 62.9 20.8 99 20-130 97-196 (382)
101 2vq2_A PILW, putative fimbrial 97.6 0.0024 8.3E-08 56.5 16.5 161 244-432 6-176 (225)
102 3upv_A Heat shock protein STI1 97.6 0.0014 4.7E-08 54.1 13.5 99 323-433 4-102 (126)
103 3q49_B STIP1 homology and U bo 97.6 0.0021 7.3E-08 53.1 14.8 102 19-132 8-109 (137)
104 4ga2_A E3 SUMO-protein ligase 97.6 0.00015 5.3E-09 63.1 7.5 53 334-392 76-129 (150)
105 4gco_A Protein STI-1; structur 97.6 0.0014 4.7E-08 55.5 13.3 93 327-431 17-109 (126)
106 1elw_A TPR1-domain of HOP; HOP 97.5 0.0011 3.9E-08 52.3 11.9 100 19-130 3-102 (118)
107 2fo7_A Synthetic consensus TPR 97.5 0.0013 4.5E-08 52.7 12.3 98 22-131 3-100 (136)
108 3sz7_A HSC70 cochaperone (SGT) 97.5 0.0021 7.3E-08 55.7 14.4 119 278-415 6-127 (164)
109 3n71_A Histone lysine methyltr 97.5 0.0026 9E-08 67.3 17.7 121 16-136 298-430 (490)
110 2lni_A Stress-induced-phosphop 97.5 0.0014 4.9E-08 53.2 12.5 105 15-131 11-115 (133)
111 3rkv_A Putative peptidylprolyl 97.5 0.0024 8.1E-08 55.3 14.3 100 327-432 15-126 (162)
112 2xev_A YBGF; tetratricopeptide 97.5 0.0019 6.4E-08 52.9 12.8 98 327-430 6-103 (129)
113 2xcb_A PCRH, regulatory protei 97.5 0.0025 8.4E-08 54.3 13.9 101 19-131 17-117 (142)
114 2vgx_A Chaperone SYCD; alterna 97.5 0.0023 7.8E-08 55.6 13.8 101 19-131 20-120 (148)
115 1hh8_A P67PHOX, NCF-2, neutrop 97.5 0.00059 2E-08 61.1 10.3 117 2-132 25-153 (213)
116 2xev_A YBGF; tetratricopeptide 97.5 0.0011 3.9E-08 54.2 11.1 102 23-130 5-106 (129)
117 2lni_A Stress-induced-phosphop 97.4 0.0033 1.1E-07 50.9 13.8 119 279-418 12-133 (133)
118 1na0_A Designed protein CTPR3; 97.4 0.0018 6.3E-08 51.5 11.8 103 16-130 5-107 (125)
119 3n71_A Histone lysine methyltr 97.4 0.0019 6.6E-08 68.3 15.2 140 286-426 312-458 (490)
120 2vsy_A XCC0866; transferase, g 97.4 0.0019 6.6E-08 67.9 15.2 132 1-151 7-138 (568)
121 2yhc_A BAMD, UPF0169 lipoprote 97.4 0.0017 5.9E-08 59.7 12.6 143 2-151 23-197 (225)
122 3mkr_A Coatomer subunit epsilo 97.4 0.042 1.4E-06 53.0 23.0 122 285-426 132-258 (291)
123 3gyz_A Chaperone protein IPGC; 97.4 0.0013 4.5E-08 58.2 11.1 101 19-131 35-135 (151)
124 2l6j_A TPR repeat-containing p 97.4 0.00086 2.9E-08 53.3 8.9 91 326-422 7-97 (111)
125 1elw_A TPR1-domain of HOP; HOP 97.3 0.0033 1.1E-07 49.5 12.3 94 325-430 6-99 (118)
126 3q49_B STIP1 homology and U bo 97.3 0.0026 9E-08 52.5 12.2 98 324-433 10-107 (137)
127 3ma5_A Tetratricopeptide repea 97.3 0.0013 4.6E-08 53.0 10.0 83 327-419 11-93 (100)
128 2dba_A Smooth muscle cell asso 97.3 0.0027 9.3E-08 52.6 12.0 106 17-131 25-130 (148)
129 4b4t_P 26S proteasome regulato 97.3 0.005 1.7E-07 64.3 16.6 121 15-137 132-255 (445)
130 1hxi_A PEX5, peroxisome target 97.3 0.00071 2.4E-08 56.8 8.3 104 15-130 12-115 (121)
131 2yhc_A BAMD, UPF0169 lipoprote 97.3 0.0018 6E-08 59.7 11.6 125 2-127 60-211 (225)
132 3qww_A SET and MYND domain-con 97.3 0.0042 1.4E-07 64.7 15.7 121 15-135 286-418 (433)
133 1p5q_A FKBP52, FK506-binding p 97.3 0.0018 6E-08 64.2 12.3 108 18-130 145-260 (336)
134 4abn_A Tetratricopeptide repea 97.3 0.006 2.1E-07 63.3 16.8 172 18-211 100-284 (474)
135 2vyi_A SGTA protein; chaperone 97.3 0.0061 2.1E-07 48.8 13.4 93 326-430 15-107 (131)
136 2hr2_A Hypothetical protein; a 97.3 0.014 4.8E-07 52.8 16.9 118 17-135 8-137 (159)
137 3urz_A Uncharacterized protein 97.3 0.0081 2.8E-07 54.6 15.4 113 21-149 5-133 (208)
138 3gyz_A Chaperone protein IPGC; 97.2 0.0033 1.1E-07 55.5 12.3 96 325-432 38-133 (151)
139 2vgx_A Chaperone SYCD; alterna 97.2 0.0044 1.5E-07 53.7 12.6 94 327-432 25-118 (148)
140 2xcb_A PCRH, regulatory protei 97.2 0.0047 1.6E-07 52.4 12.5 95 327-433 22-116 (142)
141 2dba_A Smooth muscle cell asso 97.2 0.0052 1.8E-07 50.9 12.5 101 323-432 28-128 (148)
142 1hxi_A PEX5, peroxisome target 97.2 0.0015 5.2E-08 54.7 9.1 91 327-429 21-111 (121)
143 2fbn_A 70 kDa peptidylprolyl i 97.2 0.0047 1.6E-07 55.3 12.9 104 323-432 38-151 (198)
144 1kt0_A FKBP51, 51 kDa FK506-bi 97.2 0.0039 1.3E-07 64.6 13.9 109 18-131 266-382 (457)
145 3qww_A SET and MYND domain-con 97.2 0.0029 1E-07 65.9 12.8 102 335-436 310-415 (433)
146 1ihg_A Cyclophilin 40; ppiase 97.2 0.0049 1.7E-07 62.2 14.1 109 18-131 221-338 (370)
147 3k9i_A BH0479 protein; putativ 97.1 0.0017 5.8E-08 53.4 8.6 96 34-139 3-98 (117)
148 3ma5_A Tetratricopeptide repea 97.1 0.0022 7.6E-08 51.6 8.7 71 63-137 8-78 (100)
149 2kck_A TPR repeat; tetratricop 97.1 0.0024 8.2E-08 50.0 8.7 88 331-428 14-102 (112)
150 3e4b_A ALGK; tetratricopeptide 97.1 0.25 8.6E-06 50.6 26.2 113 283-416 283-403 (452)
151 1na0_A Designed protein CTPR3; 97.1 0.013 4.3E-07 46.4 13.1 93 327-431 13-105 (125)
152 2vsy_A XCC0866; transferase, g 97.0 0.01 3.4E-07 62.4 15.3 129 283-432 23-157 (568)
153 2kck_A TPR repeat; tetratricop 96.9 0.0037 1.3E-07 48.9 8.7 95 22-128 8-105 (112)
154 2r5s_A Uncharacterized protein 96.9 0.0072 2.5E-07 53.1 11.2 129 283-427 40-168 (176)
155 2ond_A Cleavage stimulation fa 96.9 0.076 2.6E-06 50.9 19.3 116 2-129 35-163 (308)
156 3k9i_A BH0479 protein; putativ 96.9 0.0089 3E-07 48.9 10.9 87 1-95 8-94 (117)
157 2pzi_A Probable serine/threoni 96.9 0.0068 2.3E-07 66.1 12.9 113 2-130 452-564 (681)
158 1p5q_A FKBP52, FK506-binding p 96.9 0.014 4.7E-07 57.7 14.0 131 280-423 144-284 (336)
159 2kat_A Uncharacterized protein 96.9 0.0059 2E-07 49.5 9.6 87 39-136 3-89 (115)
160 2hr2_A Hypothetical protein; a 96.9 0.035 1.2E-06 50.1 15.4 108 325-432 13-131 (159)
161 1xi4_A Clathrin heavy chain; a 96.8 0.29 9.9E-06 58.0 26.2 117 64-189 939-1075(1630)
162 1ihg_A Cyclophilin 40; ppiase 96.8 0.015 5E-07 58.7 13.8 104 323-432 223-336 (370)
163 1xi4_A Clathrin heavy chain; a 96.8 0.31 1.1E-05 57.7 26.1 84 334-429 1291-1381(1630)
164 2kat_A Uncharacterized protein 96.6 0.016 5.4E-07 46.9 10.6 80 327-412 23-102 (115)
165 2c2l_A CHIP, carboxy terminus 96.6 0.012 4.1E-07 56.4 11.3 102 20-133 4-105 (281)
166 3qwp_A SET and MYND domain-con 96.6 0.018 6.2E-07 59.7 13.1 121 72-214 297-422 (429)
167 3urz_A Uncharacterized protein 96.6 0.013 4.5E-07 53.2 10.8 96 327-428 8-113 (208)
168 3qwp_A SET and MYND domain-con 96.6 0.013 4.4E-07 60.8 11.9 103 334-436 298-404 (429)
169 2c2l_A CHIP, carboxy terminus 96.5 0.018 6.3E-07 55.1 11.8 97 325-433 6-102 (281)
170 2e2e_A Formate-dependent nitri 96.5 0.04 1.4E-06 47.7 12.8 94 327-432 48-144 (177)
171 2if4_A ATFKBP42; FKBP-like, al 96.5 0.0062 2.1E-07 60.3 8.3 108 19-131 178-295 (338)
172 2l6j_A TPR repeat-containing p 96.4 0.01 3.4E-07 46.9 7.9 86 62-151 4-91 (111)
173 1kt0_A FKBP51, 51 kDa FK506-bi 96.4 0.026 8.9E-07 58.3 13.1 128 282-422 267-404 (457)
174 1klx_A Cysteine rich protein B 96.3 0.02 6.9E-07 49.1 9.7 105 2-129 14-126 (138)
175 1na3_A Designed protein CTPR2; 96.3 0.048 1.6E-06 41.2 10.9 61 327-393 13-73 (91)
176 3mv2_B Coatomer subunit epsilo 96.2 0.23 7.8E-06 49.5 17.8 168 23-212 103-280 (310)
177 3qou_A Protein YBBN; thioredox 96.2 0.031 1.1E-06 53.6 11.1 129 283-427 151-279 (287)
178 3rjv_A Putative SEL1 repeat pr 96.2 0.017 5.9E-07 52.7 8.9 108 2-131 5-120 (212)
179 3txn_A 26S proteasome regulato 96.2 0.12 4E-06 53.3 16.0 115 20-136 97-217 (394)
180 2pzi_A Probable serine/threoni 96.1 0.021 7.1E-07 62.2 10.9 123 283-427 433-558 (681)
181 2ooe_A Cleavage stimulation fa 96.1 1.5 5.2E-05 45.1 34.5 142 272-432 347-492 (530)
182 3rjv_A Putative SEL1 repeat pr 96.0 0.035 1.2E-06 50.6 10.5 110 2-129 37-158 (212)
183 1na3_A Designed protein CTPR2; 96.0 0.048 1.7E-06 41.2 9.6 66 61-130 8-73 (91)
184 2if4_A ATFKBP42; FKBP-like, al 96.0 0.025 8.5E-07 56.0 9.9 102 323-430 179-291 (338)
185 2ond_A Cleavage stimulation fa 96.0 0.053 1.8E-06 52.1 11.9 154 2-172 118-273 (308)
186 4f3v_A ESX-1 secretion system 96.0 0.075 2.6E-06 52.3 13.0 148 285-449 104-252 (282)
187 3qou_A Protein YBBN; thioredox 95.9 0.11 3.6E-06 49.8 13.8 65 21-93 118-182 (287)
188 2r5s_A Uncharacterized protein 95.9 0.01 3.6E-07 52.1 5.8 135 2-154 25-160 (176)
189 1wao_1 Serine/threonine protei 95.9 0.028 9.7E-07 58.5 10.0 84 334-429 17-100 (477)
190 2kc7_A BFR218_protein; tetratr 95.8 0.069 2.4E-06 41.5 9.7 77 329-415 6-83 (99)
191 1wao_1 Serine/threonine protei 95.7 0.031 1.1E-06 58.2 9.4 101 19-131 5-105 (477)
192 2ooe_A Cleavage stimulation fa 95.4 2.9 9.8E-05 43.0 33.6 97 21-130 14-110 (530)
193 2v5f_A Prolyl 4-hydroxylase su 95.3 0.15 5.1E-06 41.4 10.5 89 328-419 10-99 (104)
194 3ffl_A Anaphase-promoting comp 95.2 0.094 3.2E-06 47.8 9.6 95 33-127 32-149 (167)
195 3txn_A 26S proteasome regulato 94.6 0.91 3.1E-05 46.6 16.2 148 284-435 20-171 (394)
196 2kc7_A BFR218_protein; tetratr 94.2 0.21 7.1E-06 38.7 8.3 63 66-131 4-66 (99)
197 3bee_A Putative YFRE protein; 93.4 0.3 1E-05 39.4 8.0 79 21-107 7-87 (93)
198 2v5f_A Prolyl 4-hydroxylase su 93.4 0.58 2E-05 37.8 9.9 75 20-95 5-79 (104)
199 1zu2_A Mitochondrial import re 92.7 0.3 1E-05 43.9 7.7 82 2-93 21-122 (158)
200 4f3v_A ESX-1 secretion system 92.6 0.7 2.4E-05 45.3 10.8 97 20-127 102-198 (282)
201 3mv2_B Coatomer subunit epsilo 92.5 2.5 8.6E-05 41.9 14.9 127 285-427 102-235 (310)
202 1zu2_A Mitochondrial import re 92.3 0.37 1.3E-05 43.3 7.7 85 36-131 17-122 (158)
203 3ffl_A Anaphase-promoting comp 92.0 2.1 7E-05 38.9 12.3 92 334-425 31-144 (167)
204 4b4t_P 26S proteasome regulato 91.9 7.8 0.00027 39.9 18.4 201 94-358 50-253 (445)
205 3bee_A Putative YFRE protein; 91.3 0.73 2.5E-05 37.0 7.8 65 63-131 7-74 (93)
206 3u64_A Protein TP_0956; tetrat 90.8 4 0.00014 40.4 14.0 118 7-132 141-272 (301)
207 3ly7_A Transcriptional activat 90.2 3 0.0001 42.5 12.9 83 344-433 258-340 (372)
208 3ly7_A Transcriptional activat 89.8 1.1 3.8E-05 45.6 9.4 76 323-408 277-352 (372)
209 1klx_A Cysteine rich protein B 89.5 2.9 9.8E-05 35.3 10.5 82 334-431 36-125 (138)
210 4b4t_R RPN7, 26S proteasome re 89.4 1.4 4.9E-05 45.2 10.0 101 61-162 130-230 (429)
211 3t5v_B Nuclear mRNA export pro 86.3 11 0.00037 39.3 14.4 156 37-211 142-321 (455)
212 4b4t_S RPN3, 26S proteasome re 84.6 6.1 0.00021 42.0 11.6 75 57-132 226-302 (523)
213 4b4t_R RPN7, 26S proteasome re 83.8 2.2 7.5E-05 43.8 7.7 110 20-134 131-242 (429)
214 1b89_A Protein (clathrin heavy 83.5 11 0.00037 39.3 12.8 82 27-129 9-90 (449)
215 1pc2_A Mitochondria fission pr 79.1 7.9 0.00027 34.4 8.6 28 104-131 75-102 (152)
216 3u64_A Protein TP_0956; tetrat 73.1 6.2 0.00021 39.0 6.8 76 17-98 196-277 (301)
217 4h7y_A Dual specificity protei 72.7 5.6 0.00019 35.7 5.7 68 17-93 58-125 (161)
218 2wpv_A GET4, UPF0363 protein Y 65.0 92 0.0031 30.6 13.4 145 24-195 96-257 (312)
219 2ijq_A Hypothetical protein; s 63.1 22 0.00077 31.8 7.7 89 327-415 36-127 (161)
220 2cwy_A Hypothetical protein TT 62.7 27 0.00091 28.3 7.5 84 327-412 5-88 (94)
221 4b4t_O 26S proteasome regulato 62.3 62 0.0021 32.6 11.9 101 31-131 86-200 (393)
222 2ynq_A ESSB; membrane protein, 61.8 30 0.001 31.0 8.2 112 281-420 9-121 (161)
223 4h7y_A Dual specificity protei 58.3 1E+02 0.0035 27.5 11.7 108 23-142 16-132 (161)
224 1pc2_A Mitochondria fission pr 57.7 33 0.0011 30.3 7.8 84 7-93 2-102 (152)
225 1nzn_A CGI-135 protein, fissio 51.6 69 0.0023 27.4 8.6 28 104-131 78-105 (126)
226 1b89_A Protein (clathrin heavy 50.9 26 0.00089 36.5 6.8 105 22-147 124-250 (449)
227 1nzn_A CGI-135 protein, fissio 49.4 51 0.0017 28.2 7.4 87 6-93 4-105 (126)
228 4b4t_S RPN3, 26S proteasome re 48.2 1.6E+02 0.0054 31.2 12.4 80 272-355 217-302 (523)
229 4g26_A Pentatricopeptide repea 43.6 2.9E+02 0.0098 28.4 14.2 84 334-427 116-199 (501)
230 2w2u_A Hypothetical P60 katani 43.0 24 0.00083 27.9 4.0 35 317-351 12-47 (83)
231 3dss_A Geranylgeranyl transfer 39.9 2.8E+02 0.0095 27.1 15.2 144 62-214 144-304 (331)
232 1y8m_A FIS1; mitochondria, unk 38.9 84 0.0029 27.6 7.2 28 102-129 79-106 (144)
233 2ynq_A ESSB; membrane protein, 38.7 91 0.0031 27.9 7.5 102 15-145 6-111 (161)
234 4gns_B Protein CSD3, chitin bi 37.4 1.6E+02 0.0056 32.5 10.9 61 61-126 336-397 (754)
235 4b4t_O 26S proteasome regulato 37.3 1.3E+02 0.0044 30.1 9.5 95 336-430 89-196 (393)
236 2wpv_A GET4, UPF0363 protein Y 37.1 2.6E+02 0.0088 27.4 11.3 88 34-123 46-157 (312)
237 4gns_B Protein CSD3, chitin bi 35.9 1.9E+02 0.0066 31.9 11.2 84 335-424 297-392 (754)
238 4fhn_B Nucleoporin NUP120; pro 35.8 1.4E+02 0.0048 34.3 10.5 101 325-427 844-962 (1139)
239 3o48_A Mitochondria fission 1 34.8 1E+02 0.0036 26.6 7.1 30 100-129 78-107 (134)
240 3t5v_B Nuclear mRNA export pro 32.9 1.5E+02 0.005 30.7 9.2 73 284-356 177-254 (455)
241 3mkq_A Coatomer beta'-subunit; 30.7 2.3E+02 0.008 29.7 10.6 16 334-349 692-707 (814)
242 4g26_A Pentatricopeptide repea 30.5 4.1E+02 0.014 27.2 12.2 82 336-427 83-164 (501)
243 3o48_A Mitochondria fission 1 30.2 1.1E+02 0.0038 26.4 6.5 74 15-93 35-109 (134)
244 2o8p_A 14-3-3 domain containin 30.2 2.9E+02 0.01 25.9 9.9 60 334-393 136-198 (227)
245 2cpt_A SKD1 protein, vacuolar 29.5 82 0.0028 26.4 5.4 33 319-351 13-46 (117)
246 3mkq_B Coatomer subunit alpha; 29.0 1.5E+02 0.0052 26.7 7.5 100 272-389 1-115 (177)
247 3lpz_A GET4 (YOR164C homolog); 25.3 5E+02 0.017 25.6 13.7 55 22-76 96-150 (336)
248 1y8m_A FIS1; mitochondria, unk 23.7 1.1E+02 0.0037 26.9 5.2 72 17-93 36-108 (144)
249 3mkq_A Coatomer beta'-subunit; 22.9 79 0.0027 33.4 5.1 39 347-389 669-707 (814)
250 2v6y_A AAA family ATPase, P60 22.6 1E+02 0.0034 24.1 4.4 32 320-351 7-39 (83)
251 2br9_A 14-3-3E, 14-3-3 protein 22.3 2.2E+02 0.0074 26.8 7.5 60 339-398 146-208 (234)
252 1wy6_A Hypothetical protein ST 22.0 2.9E+02 0.01 24.5 7.6 105 278-391 40-153 (172)
253 4e6h_A MRNA 3'-END-processing 22.0 7.5E+02 0.026 26.5 19.3 105 21-131 379-501 (679)
254 3dra_A Protein farnesyltransfe 21.9 4.7E+02 0.016 25.0 10.1 94 322-427 33-134 (306)
255 4e6h_A MRNA 3'-END-processing 21.8 3.4E+02 0.012 29.3 10.0 92 4-106 53-150 (679)
256 3t5x_A PCI domain-containing p 21.0 1.2E+02 0.004 27.7 5.2 38 320-357 11-48 (203)
257 2v6x_A Vacuolar protein sortin 20.9 1.2E+02 0.0042 23.5 4.6 34 318-351 7-41 (85)
258 2uy1_A Cleavage stimulation fa 20.1 4.5E+02 0.016 26.7 10.1 103 20-136 286-400 (493)
No 1
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.79 E-value=2.3e-16 Score=155.56 Aligned_cols=347 Identities=14% Similarity=0.068 Sum_probs=228.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc--hhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ--HSI 96 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~--~~~ 96 (466)
.+.+....|..+ ....+.++|..++++++.+... ..+....+...+|.+|...|.+..+...++++++... +.+
T Consensus 8 ~~~~l~~~g~~~-~~~g~~~~A~~~~~~al~~~~~---~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 83 (406)
T 3sf4_A 8 SCLELALEGERL-CKSGDCRAGVSFFEAAVQVGTE---DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQ 83 (406)
T ss_dssp CHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCCS---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHH-HHhccHHHHHHHHHHHHhcCcc---cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcccc
Confidence 455566777664 4567888888888888887444 4667778888888888888888888888888888765 555
Q ss_pred hhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccC--------------------c
Q psy9584 97 YWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKK--------------------V 156 (466)
Q Consensus 97 ~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~--------------------~ 156 (466)
......++.+|.++...||++.|++.++.+.+++...+++..........+.++....+ .
T Consensus 84 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~ 163 (406)
T 3sf4_A 84 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDAL 163 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHH
Confidence 66677777888888888888888888888888888888866554444444444332211 1
Q ss_pred cHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCc
Q psy9584 157 NDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGD 236 (466)
Q Consensus 157 ~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~ 236 (466)
++....+.++-.+.+.. +. ......++... ...+...|+...+...+++.-.....
T Consensus 164 ~~A~~~~~~al~~~~~~-~~--~~~~~~~~~~l--a~~~~~~g~~~~A~~~~~~al~~~~~------------------- 219 (406)
T 3sf4_A 164 QAAVDFYEENLSLVTAL-GD--RAAQGRAFGNL--GNTHYLLGNFRDAVIAHEQRLLIAKE------------------- 219 (406)
T ss_dssp HHHHHHHHHHHHHHHHT-TC--HHHHHHHHHHH--HHHHHHHTBHHHHHHHHHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHHHHHHhc-cC--cHHHHHHHHHH--HHHHHHccCHHHHHHHHHHHHHHHHh-------------------
Confidence 11112222222222221 11 11112222221 22334455655555555444322222
Q ss_pred ccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCc
Q psy9584 237 MFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPET 313 (466)
Q Consensus 237 ~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~ 313 (466)
..++...+.+..|+|.+|...++.. ++++..-.+.+..
T Consensus 220 ---------------------------------------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 220 ---------------------------------------FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 260 (406)
T ss_dssp ---------------------------------------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------------------cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC
Confidence 1245566778999999999987433 2333332232211
Q ss_pred cccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHh
Q psy9584 314 LTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLA 393 (466)
Q Consensus 314 ~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lA 393 (466)
......+.+++.-|......|++.+|.+++++++++....+.....+.++..+|.++...|++++|.+....++.++
T Consensus 261 ---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 337 (406)
T 3sf4_A 261 ---KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 337 (406)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred ---cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 11222244444455556889999999999999999999998888889999999999999999999999999999999
Q ss_pred hcCCChhHHHHHHHHHHHHHHHcCCchHHH-HHHHHHHHHHHH
Q psy9584 394 SKIPDVHVQLWASAILKDLYKILNDPVREN-EALQMHCNFSQM 435 (466)
Q Consensus 394 kK~~D~~~qlw~~~lL~~ly~~~g~~~~~~-e~~~~~~~~s~~ 435 (466)
++++|......+...+.++|...|++.++. ....-...+.++
T Consensus 338 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 380 (406)
T 3sf4_A 338 REVGDKSGELTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSS 380 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTTSCC--------------
T ss_pred HHhcCCcchhHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999885543 333333334343
No 2
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.75 E-value=4.3e-15 Score=148.25 Aligned_cols=332 Identities=12% Similarity=0.004 Sum_probs=242.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc--h
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ--H 94 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~--~ 94 (466)
..++...+.+|..+ ....+.++|..++++++.+ .+...+....++..+|.+|...|++..+...++++++..+ +
T Consensus 45 ~~~~~~l~~~g~~~-~~~g~~~~A~~~~~~al~~---~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 45 SSMCLELALEGERL-CNAGDCRAGVAFFQAAIQA---GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHH---CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHHh---cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcc
Confidence 57788888899875 4567899999999999887 3446677889999999999999999999999999999875 3
Q ss_pred hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHH--HHHHHHHHhcccCccHHHHHHHHHhhHhhh
Q psy9584 95 SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLF--LLSRCMLLLIDKKVNDAVQLLTQAGYQVEN 172 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf--~ls~~~~ll~~~~~~~v~~al~~~~~l~~~ 172 (466)
........++.+|.++...|++..|++.++.++.++.+.+++...... .++.++..+..... ....+...+.
T Consensus 121 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~------~~~~~~~~~~ 194 (411)
T 4a1s_A 121 DRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLG------QRNPGKFGDD 194 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH------HHSTTCCCHH
T ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccc------cccchhhhhh
Confidence 456777888899999999999999999999999999998886433222 22222211111000 0000000000
Q ss_pred hccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHH
Q psy9584 173 WTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYL 252 (466)
Q Consensus 173 ~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl 252 (466)
. ...+.+.++.|-..++++ + .
T Consensus 195 a--~~~~~~A~~~~~~al~~~---------------~-------~----------------------------------- 215 (411)
T 4a1s_A 195 V--KEALTRAVEFYQENLKLM---------------R-------D----------------------------------- 215 (411)
T ss_dssp H--HHHHHHHHHHHHHHHHHH---------------H-------H-----------------------------------
T ss_pred h--hHHHHHHHHHHHHHHHHH---------------H-------H-----------------------------------
Confidence 0 000223333333333322 1 1
Q ss_pred HHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHH
Q psy9584 253 VTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQ 329 (466)
Q Consensus 253 ~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~ 329 (466)
..++.....+..|+|.+|...++.. ++++..-++.+. .......+.+++.-
T Consensus 216 -----------------------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~l 269 (411)
T 4a1s_A 216 -----------------------LGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE---FGDRAAERRANSNL 269 (411)
T ss_dssp -----------------------HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---HTCHHHHHHHHHHH
T ss_pred -----------------------cCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh---cCCcHHHHHHHHHH
Confidence 1134556678899999999987433 233333333332 01111223343445
Q ss_pred hHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHH
Q psy9584 330 GLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAIL 409 (466)
Q Consensus 330 ~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL 409 (466)
|...+.+|++.+|.+++++++++....+.....+.++..+|.++...|++++|.+....++.++.+.+|......+...+
T Consensus 270 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 349 (411)
T 4a1s_A 270 GNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSL 349 (411)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHH
Confidence 55568899999999999999999999988888899999999999999999999999999999999999998888899999
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHhhh
Q psy9584 410 KDLYKILNDPVRENEALQMHCNFSQMLLKDHFQS 443 (466)
Q Consensus 410 ~~ly~~~g~~~~~~e~~~~~~~~s~~l~~~~~~~ 443 (466)
.++|...||+++|.++++....+.+.+-....+.
T Consensus 350 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 383 (411)
T 4a1s_A 350 GNAHSAIGGHERALKYAEQHLQLAXXXXXXXXXX 383 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHhhcccchhhh
Confidence 9999999999999999999999888886655555
No 3
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.72 E-value=2e-14 Score=136.38 Aligned_cols=309 Identities=13% Similarity=0.041 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHH
Q psy9584 61 KFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRV 140 (466)
Q Consensus 61 K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~ 140 (466)
.+....+.|+++...|+++.+...++++++...+.+.+....++.+|.++...||+..|++.++.+.+++.+.+++....
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 35566788999999999999999999999998777788888999999999999999999999999999999999876544
Q ss_pred HHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhh--------------------
Q psy9584 141 LFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQ-------------------- 200 (466)
Q Consensus 141 lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~-------------------- 200 (466)
......+.++....+.++....+.++-.+.+.. +. ......++...-.+ +...|+
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~--~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-ND--KVGEARALYNLGNV--YHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TC--HHHHHHHHHHHHHH--HHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-cC--chHHHHHHHHHHHH--HHHcCcccccchhhhhhhhhhhHHHH
Confidence 444444444333333343344444444444442 22 11222233332222 222333
Q ss_pred hhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchh
Q psy9584 201 VKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERE 280 (466)
Q Consensus 201 v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~ 280 (466)
...+...+++.-... +...++.
T Consensus 159 ~~~A~~~~~~a~~~~----------------------------------------------------------~~~~~~~ 180 (338)
T 3ro2_A 159 LQAAVDLYEENLSLV----------------------------------------------------------TALGDRA 180 (338)
T ss_dssp HHHHHHHHHHHHHHH----------------------------------------------------------HHHTCHH
T ss_pred HHHHHHHHHHHHHHH----------------------------------------------------------HhcCCHH
Confidence 222222221111110 1123455
Q ss_pred hHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhh
Q psy9584 281 LWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAED 357 (466)
Q Consensus 281 ~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~ 357 (466)
....+..++|.+|...++.. ++++..-++.+. .......+.+.+.-|...+..|++.+|.+++++++++....+
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 257 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE---FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 257 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhc
Confidence 66678999999999977433 233333222221 011112233334455555889999999999999999999998
Q ss_pred hhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Q psy9584 358 LNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQM 435 (466)
Q Consensus 358 l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s~~ 435 (466)
.....+.++..+|.++...|++++|.+....++.++.+.+|......+...+.++|...|++++|.++++....+.+.
T Consensus 258 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 258 DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred chhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999999998877766554
No 4
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.71 E-value=3.5e-14 Score=139.92 Aligned_cols=312 Identities=13% Similarity=0.040 Sum_probs=221.1
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHH
Q psy9584 59 DVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYT 138 (466)
Q Consensus 59 d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~ 138 (466)
+..+.+...+|+++...|.+..+...++++++.....+.....+++.+|.++...||+..|++.++.++.++...+++..
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 85 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG 85 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHH
Confidence 44567788999999999999999999999999987777777889999999999999999999999999999999998765
Q ss_pred HHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhh------------------
Q psy9584 139 RVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQ------------------ 200 (466)
Q Consensus 139 ~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~------------------ 200 (466)
...+....+.++....+.++....+.++-.+.+.. +. ......++...-. .+...|+
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~~--~~~~~~~~~~l~~--~~~~~g~~~~~~~~~~~~~~~~~a~ 160 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-ND--KVGEARALYNLGN--VYHAKGKSFGCPGPQDVGEFPEEVR 160 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-TC--HHHHHHHHHHHHH--HHHHHHHTCC-------CCCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-cc--ccchHHHHHHHHH--HHHHcCCcccccccchhhhhhhhHH
Confidence 44444444444333333333334444444444432 22 1122223333222 2233344
Q ss_pred --hhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcc
Q psy9584 201 --VKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQE 278 (466)
Q Consensus 201 --v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~ 278 (466)
...+...+++.-.... ...+
T Consensus 161 ~~~~~A~~~~~~al~~~~----------------------------------------------------------~~~~ 182 (406)
T 3sf4_A 161 DALQAAVDFYEENLSLVT----------------------------------------------------------ALGD 182 (406)
T ss_dssp HHHHHHHHHHHHHHHHHH----------------------------------------------------------HTTC
T ss_pred HHHHHHHHHHHHHHHHHH----------------------------------------------------------hccC
Confidence 2222222211111110 1234
Q ss_pred hhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhh
Q psy9584 279 RELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355 (466)
Q Consensus 279 ~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~ 355 (466)
+...+.+..|+|.+|...++.. ++++..-++.+.. ......+.+++.-|...+..|++.+|.+++++++++...
T Consensus 183 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 259 (406)
T 3sf4_A 183 RAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 259 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 5566778999999999977432 2333332232210 111112334444555568899999999999999999999
Q ss_pred hhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Q psy9584 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQM 435 (466)
Q Consensus 356 ~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s~~ 435 (466)
.+.....+.++..+|.++...|++++|.+....++.++.+.+|......+...+..+|...|++++|.++++....+.+.
T Consensus 260 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 339 (406)
T 3sf4_A 260 LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 339 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 98888889999999999999999999999999999999999999999999999999999999999999998888777655
Q ss_pred H
Q psy9584 436 L 436 (466)
Q Consensus 436 l 436 (466)
.
T Consensus 340 ~ 340 (406)
T 3sf4_A 340 V 340 (406)
T ss_dssp T
T ss_pred h
Confidence 4
No 5
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.68 E-value=1.6e-13 Score=130.16 Aligned_cols=304 Identities=13% Similarity=0.044 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc--hhhhh
Q psy9584 21 RTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ--HSIYW 98 (466)
Q Consensus 21 ~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~--~~~~W 98 (466)
...+..|.. +....+.++|..++++++.+ .+...+....+...+|.+|...|+++.+...++++++... +.+..
T Consensus 6 ~~l~~~g~~-~~~~g~~~~A~~~~~~al~~---~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 81 (338)
T 3ro2_A 6 LELALEGER-LCKSGDCRAGVSFFEAAVQV---GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG 81 (338)
T ss_dssp HHHHHHHHH-HHHTTCHHHHHHHHHHHHHH---CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHH-HHHhccHHHHHHHHHHHHhh---CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHH
Confidence 344555655 45678999999999999887 3446677789999999999999999999999999999876 45677
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHH--HHHHHHHHhccc----CccHHHHHHHHHhhHhhh
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLF--LLSRCMLLLIDK----KVNDAVQLLTQAGYQVEN 172 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf--~ls~~~~ll~~~----~~~~v~~al~~~~~l~~~ 172 (466)
....++.+|.++...|++..|++.++.+.+++.+.+++...... .++.+...+... ..... +...+.
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~ 154 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDT-------GEFPED 154 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC-----------CCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhh-------hhhhhh
Confidence 78888999999999999999999999999999999887554333 333333322220 00000 000000
Q ss_pred hccccchHhhHHHHHHHHHHH------------------hhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCC
Q psy9584 173 WTGSQYQKEYLKVFFLVLQVC------------------HYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNV 234 (466)
Q Consensus 173 ~~g~~~~~e~L~~~~~~L~i~------------------~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~ 234 (466)
. ...+.+.++.|-..+.++ .+...|+...+...+++.-.....
T Consensus 155 a--~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~----------------- 215 (338)
T 3ro2_A 155 V--RNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE----------------- 215 (338)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-----------------
T ss_pred H--HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-----------------
Confidence 0 000222333333333332 223334443333333322211111
Q ss_pred CcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCchH---HHHHHhhhCC
Q psy9584 235 GDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREGD---FAALLERINP 311 (466)
Q Consensus 235 ~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~e---~~~~l~~i~~ 311 (466)
..++.....+..++|.+|...++..+ +++..-.+.+
T Consensus 216 -----------------------------------------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 216 -----------------------------------------FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp -----------------------------------------HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 23456667789999999999774332 3333322222
Q ss_pred CccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHH
Q psy9584 312 ETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQ 391 (466)
Q Consensus 312 ~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~ 391 (466)
. .......+.+++.-|...+.+|++.+|.+++++++++....+.....+.++..+|.++...|++++|.+....+++
T Consensus 255 ~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 331 (338)
T 3ro2_A 255 Q---LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 331 (338)
T ss_dssp H---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred h---hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 1 1112222444444555568899999999999999999999988888899999999999999999999999999999
Q ss_pred HhhcCCC
Q psy9584 392 LASKIPD 398 (466)
Q Consensus 392 lAkK~~D 398 (466)
++++++|
T Consensus 332 ~~~~~~d 338 (338)
T 3ro2_A 332 ISREVGD 338 (338)
T ss_dssp C------
T ss_pred HHHhhcC
Confidence 9998876
No 6
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.67 E-value=3.8e-14 Score=141.33 Aligned_cols=292 Identities=14% Similarity=0.093 Sum_probs=224.4
Q ss_pred cchhHHHhhcCCC-ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccc
Q psy9584 2 CIQCLQAVFNFKP-PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNL 80 (466)
Q Consensus 2 ai~CLeAvl~~~~-~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ 80 (466)
|+.+++.+++..+ .|...+.++..+|.+++ ...+.++|..++++++.+.+..+ .......+...+|.+|...|.+..
T Consensus 67 A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~ 144 (411)
T 4a1s_A 67 GVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMN-DRLGEAKSSGNLGNTLKVMGRFDE 144 (411)
T ss_dssp HHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHcc-CchHHHHHHHHHHHHHHHCCCHHH
Confidence 6788888887655 57778899999999865 57899999999999999988865 567888999999999999999999
Q ss_pred hhHHHHHHHHhhc--hhhhhHHHHHHHHHHHhccccc-----------------HHHHHHHHHhHHHHHHHhcChHHHHH
Q psy9584 81 SKPILRRAIELSQ--HSIYWHCRLIFQLAQIHAGEKD-----------------YELASSLLGVGVDYANISNAQYTRVL 141 (466)
Q Consensus 81 ak~~l~k~i~~s~--~~~~W~~~~~fqLA~i~~~~~D-----------------~~~A~~~L~~g~~~A~~~~d~~~~~l 141 (466)
+...++++++... +........++.+|.++...|+ +..|++.++.+.+++...+++...
T Consensus 145 A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~-- 222 (411)
T 4a1s_A 145 AAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQ-- 222 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH--
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHH--
Confidence 9999999999976 3456778888899999999999 999999999999999888776221
Q ss_pred HHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCC
Q psy9584 142 FLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQP 221 (466)
Q Consensus 142 f~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~ 221 (466)
..++...+.++-. .|. +.+.++.|-.+++++ +..
T Consensus 223 ------------------~~~~~~la~~~~~-~g~--~~~A~~~~~~al~~~---------------~~~---------- 256 (411)
T 4a1s_A 223 ------------------GRACGNLGNTYYL-LGD--FQAAIEHHQERLRIA---------------REF---------- 256 (411)
T ss_dssp ------------------HHHHHHHHHHHHH-TTC--HHHHHHHHHHHHHHH---------------HHH----------
T ss_pred ------------------HHHHHHHHHHHHH-cCC--hHHHHHHHHHHHHHH---------------Hhc----------
Confidence 2233334444433 344 556777776666655 111
Q ss_pred CCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCchH
Q psy9584 222 TWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREGD 301 (466)
Q Consensus 222 ~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~e 301 (466)
.++.....+..|+|.+|...++..+
T Consensus 257 -------------------------------------------------------~~~~~~~~~~~~la~~~~~~g~~~~ 281 (411)
T 4a1s_A 257 -------------------------------------------------------GDRAAERRANSNLGNSHIFLGQFED 281 (411)
T ss_dssp -------------------------------------------------------TCHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred -------------------------------------------------------CCcHHHHHHHHHHHHHHHHCcCHHH
Confidence 1344556788999999999874332
Q ss_pred ---HHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCC
Q psy9584 302 ---FAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGN 378 (466)
Q Consensus 302 ---~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~ 378 (466)
+++..-.+.+.. ......+.+++.-|.....+|++.+|.++++++++++...+.....+.++..+|.++...|+
T Consensus 282 A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 358 (411)
T 4a1s_A 282 AAEHYKRTLALAVEL---GEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGG 358 (411)
T ss_dssp HHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhcc
Confidence 333332222211 11122244445555556889999999999999999999998888889999999999999999
Q ss_pred hHHHHHhhHHHHHHhhcCCChhH
Q psy9584 379 HRESMNMVTPAMQLASKIPDVHV 401 (466)
Q Consensus 379 ~~ea~~~~~~a~~lAkK~~D~~~ 401 (466)
+++|.+....++.+++++.|...
T Consensus 359 ~~~A~~~~~~al~~~~~~~~~~~ 381 (411)
T 4a1s_A 359 HERALKYAEQHLQLAXXXXXXXX 381 (411)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccchh
Confidence 99999999999999999988644
No 7
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.54 E-value=1.2e-11 Score=123.69 Aligned_cols=325 Identities=8% Similarity=-0.022 Sum_probs=215.0
Q ss_pred HhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchh-----------HHHHHHHHhhc-hhhhhH
Q psy9584 32 THTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSK-----------PILRRAIELSQ-HSIYWH 99 (466)
Q Consensus 32 ~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak-----------~~l~k~i~~s~-~~~~W~ 99 (466)
-...|+++|+..++........+..-.++..--..+..+.....+.....+ ..+.+.-.... ......
T Consensus 23 i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~l~ 102 (383)
T 3ulq_A 23 IRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEIDKKQARLTGLLE 102 (383)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHhhcCcccccccccccchhhHHHHHHhcCCCchhHHH
Confidence 468899999999999766555443334444322233344444444444444 65555322222 233455
Q ss_pred HHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccch
Q psy9584 100 CRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQ 179 (466)
Q Consensus 100 ~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~ 179 (466)
+.++|.+|.++...|||+.|++.++++..++.+.+|+.. ...++...|.++-. .|. +
T Consensus 103 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--------------------~a~~~~~lg~~~~~-~~~--~ 159 (383)
T 3ulq_A 103 YYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIE--------------------KAEFFFKMSESYYY-MKQ--T 159 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHH--------------------HHHHHHHHHHHHHH-TTC--H
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHH--------------------HHHHHHHHHHHHHH-cCC--H
Confidence 677888999999999999999999999999998888622 23334444444444 344 5
Q ss_pred HhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhh
Q psy9584 180 KEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHL 259 (466)
Q Consensus 180 ~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~l 259 (466)
.+++..|.+.++++. +... -+.....++..++.+
T Consensus 160 ~~A~~~~~~al~~~~---------------~~~~---------------------------~~~~~~~~~~~lg~~---- 193 (383)
T 3ulq_A 160 YFSMDYARQAYEIYK---------------EHEA---------------------------YNIRLLQCHSLFATN---- 193 (383)
T ss_dssp HHHHHHHHHHHHHHH---------------TCST---------------------------THHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHH---------------hCcc---------------------------chHHHHHHHHHHHHH----
Confidence 556666666665551 1000 001112234444444
Q ss_pred hHHHhcCchhh------HHhhh---hcchhhHHHHHHHHHHHHHhCCCc--h-HHHHHHhhhCCC-ccccccchhhHHHH
Q psy9584 260 KFFGVTGTAGT------EVERL---SQERELWTFANLNLAIVYLRGKRE--G-DFAALLERINPE-TLTSHSHSLRAAAY 326 (466)
Q Consensus 260 k~Flv~G~~~~------eAl~~---~~~~~~~~~~~lNlai~Yl~~~~~--~-e~~~~l~~i~~~-~~~~~~~~L~a~~~ 326 (466)
|..+|++.. +|++. ..++...+.+..|+|.+|...++- + ++++..-++.+. ... ... +.++
T Consensus 194 --~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~---~~~-~~~~ 267 (383)
T 3ulq_A 194 --FLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNIL---PSL-PQAY 267 (383)
T ss_dssp --HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCG---GGH-HHHH
T ss_pred --HHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccc---hhH-HHHH
Confidence 555666544 35544 345677778999999999998743 2 233333222111 000 111 2222
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
+.-|...+..|++++|.++++++++++...+....... +..+|.++...|+. +....|+...++.++......+.
T Consensus 268 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~l~~~~~~~~~~----~~~~~al~~~~~~~~~~~~~~~~ 342 (383)
T 3ulq_A 268 FLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSE-FEFLKSLYLSGPDE----EAIQGFFDFLESKMLYADLEDFA 342 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHTSSCCH----HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHhCCCcH----HHHHHHHHHHHHCcCHHHHHHHH
Confidence 34444457899999999999999999998887777665 77899999999996 67788888889999988888889
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMHCNFSQML 436 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~~~~s~~l 436 (466)
..|.++|...||+++|.++++....+.+++
T Consensus 343 ~~la~~y~~~g~~~~A~~~~~~al~~~~~i 372 (383)
T 3ulq_A 343 IDVAKYYHERKNFQKASAYFLKVEQVRQLI 372 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999888877765
No 8
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.54 E-value=1.7e-11 Score=122.83 Aligned_cols=273 Identities=12% Similarity=0.026 Sum_probs=210.2
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH 94 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~ 94 (466)
.+..+...++..|.. +....|.++|..++++|+.+++..+ -......+++.||.+|...|++..+...+++++++...
T Consensus 96 ~~~l~~~~~~~~g~~-~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 96 TGLLKYYSLFFRGMY-EFDQKEYVEAIGYYREAEKELPFVS-DDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp HHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHTTGGGCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHhhCC-ChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHh
Confidence 455666677777765 4667899999999999999988865 56788999999999999999999999999999999872
Q ss_pred ---hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhh
Q psy9584 95 ---SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVE 171 (466)
Q Consensus 95 ---~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~ 171 (466)
........++.+|.++...|+++.|++.++++++++.+.+++. . +..++...|.++.
T Consensus 174 ~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~-------------------~-~~~~~~~lg~~y~ 233 (378)
T 3q15_A 174 HPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDR-------------------F-IAISLLNIANSYD 233 (378)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH-------------------H-HHHHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHH-------------------H-HHHHHHHHHHHHH
Confidence 3557788889999999999999999999999999999988872 1 3445566666666
Q ss_pred hhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHH
Q psy9584 172 NWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVY 251 (466)
Q Consensus 172 ~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvy 251 (466)
. .|. +.++++.|-.+++++ ++. .
T Consensus 234 ~-~~~--~~~A~~~~~~al~~~---------------~~~--------~------------------------------- 256 (378)
T 3q15_A 234 R-SGD--DQMAVEHFQKAAKVS---------------REK--------V------------------------------- 256 (378)
T ss_dssp H-HTC--HHHHHHHHHHHHHHH---------------HHH--------C-------------------------------
T ss_pred H-CCC--HHHHHHHHHHHHHHH---------------Hhh--------C-------------------------------
Confidence 5 455 677888888877766 211 1
Q ss_pred HHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhH
Q psy9584 252 LVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGL 331 (466)
Q Consensus 252 l~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~ 331 (466)
++.. ..+..|+|.+|.
T Consensus 257 --------------------------~~~~-~~~~~~la~~~~------------------------------------- 272 (378)
T 3q15_A 257 --------------------------PDLL-PKVLFGLSWTLC------------------------------------- 272 (378)
T ss_dssp --------------------------GGGH-HHHHHHHHHHHH-------------------------------------
T ss_pred --------------------------ChhH-HHHHHHHHHHHH-------------------------------------
Confidence 2333 556666665544
Q ss_pred HHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHH
Q psy9584 332 QSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKD 411 (466)
Q Consensus 332 ~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ 411 (466)
..|++++|..+++++++++...+...... .+..++.++...++. +....|+...++.++..........|.+
T Consensus 273 ---~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~l~~ly~~~~~~----~~~~~al~~~~~~~~~~~~~~~~~~la~ 344 (378)
T 3q15_A 273 ---KAGQTQKAFQFIEEGLDHITARSHKFYKE-LFLFLQAVYKETVDE----RKIHDLLSYFEKKNLHAYIEACARSAAA 344 (378)
T ss_dssp ---HTTCHHHHHHHHHHHHHHCCTTCCSCHHH-HHHHHHHHHSSSCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ---HCCCHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHhCCCcH----HHHHHHHHHHHhCCChhHHHHHHHHHHH
Confidence 44566777778888888877766555444 457788888887774 5566677777777777767777788999
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHH
Q psy9584 412 LYKILNDPVRENEALQMHCNFSQMLLK 438 (466)
Q Consensus 412 ly~~~g~~~~~~e~~~~~~~~s~~l~~ 438 (466)
+|...||+++|.++++......+++..
T Consensus 345 ~y~~~g~~~~A~~~~~~al~~~~~~~~ 371 (378)
T 3q15_A 345 VFESSCHFEQAAAFYRKVLKAQEDILK 371 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999988888887754
No 9
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.46 E-value=9.7e-10 Score=108.74 Aligned_cols=333 Identities=14% Similarity=0.110 Sum_probs=220.9
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc-
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ- 93 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~- 93 (466)
.|...+.++.-.|.+++ ...++++|..++++++...... -......+...++.+|...|.++.+...++++++...
T Consensus 9 ~~~~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 85 (373)
T 1hz4_A 9 EDTMHAEFNALRAQVAI-NDGNPDEAERLAKLALEELPPG--WFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQ 85 (373)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTCCTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHcCCCC--chhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh
Confidence 46667777777887654 6788999999999998865321 2346778899999999999999999999999999886
Q ss_pred -hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcCh--HHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHh
Q psy9584 94 -HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQ--YTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQV 170 (466)
Q Consensus 94 -~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~--~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~ 170 (466)
+.+......++.+|.++...||+..|++.++.++..+.+.+++ ..........+.++....+.++....+.++-.+.
T Consensus 86 ~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 86 HDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 4445566677889999999999999999999999999998875 2232222223333333334444444455554444
Q ss_pred hhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHH
Q psy9584 171 ENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVV 250 (466)
Q Consensus 171 ~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLv 250 (466)
+. .|.+ .....+... ...+...|+...+...+++.-.... .++
T Consensus 166 ~~-~~~~---~~~~~~~~l--a~~~~~~g~~~~A~~~l~~a~~~~~---~~~---------------------------- 208 (373)
T 1hz4_A 166 SS-YQPQ---QQLQCLAML--IQCSLARGDLDNARSQLNRLENLLG---NGK---------------------------- 208 (373)
T ss_dssp TT-SCGG---GGHHHHHHH--HHHHHHHTCHHHHHHHHHHHHHHHT---TSC----------------------------
T ss_pred hc-cCcH---HHHHHHHHH--HHHHHHcCCHHHHHHHHHHHHHHHh---ccC----------------------------
Confidence 44 2332 123333332 2234567887777777765533221 111
Q ss_pred HHHHHhhhhhHHHhcCchhhHHhhhhcch-hhHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHH
Q psy9584 251 YLVTVIGHLKFFGVTGTAGTEVERLSQER-ELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQ 329 (466)
Q Consensus 251 yl~tv~~~lk~Flv~G~~~~eAl~~~~~~-~~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~ 329 (466)
.+ ..........+.+|+..|+..+....+++.-... +...... .......
T Consensus 209 ---------------------------~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~-~~~~~~~-~~~~~~l 259 (373)
T 1hz4_A 209 ---------------------------YHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPE-FANNHFL-QGQWRNI 259 (373)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCC-CTTCGGG-HHHHHHH
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCC-CCcchhh-HHHHHHH
Confidence 11 1112233345566878775554444443333211 1111111 1111233
Q ss_pred hHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHH
Q psy9584 330 GLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAIL 409 (466)
Q Consensus 330 ~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL 409 (466)
|-....+|++.+|..++++++......+...-....+..+|.++...|+.++|......++.++...+.+...+....-+
T Consensus 260 a~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~~~~~g~~~~~~~~g~~~ 339 (373)
T 1hz4_A 260 ARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAM 339 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCHHHHTTHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccccHHHHHHHccHHH
Confidence 44447789999999999999999888776666666889999999999999999999999999999988877666655545
Q ss_pred HHHHHHc
Q psy9584 410 KDLYKIL 416 (466)
Q Consensus 410 ~~ly~~~ 416 (466)
.++.+.+
T Consensus 340 ~~ll~~~ 346 (373)
T 1hz4_A 340 AQQLRQL 346 (373)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 10
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.42 E-value=1e-10 Score=116.79 Aligned_cols=268 Identities=10% Similarity=-0.038 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch---
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH--- 94 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~--- 94 (466)
.+...++-.|.. +....+.++|..++++|+.+++..+ -......++..+|.+|...|++..|...+++++++...
T Consensus 101 l~~~~~~~~g~~-~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 178 (383)
T 3ulq_A 101 LEYYFNFFRGMY-ELDQREYLSAIKFFKKAESKLIFVK-DRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA 178 (383)
T ss_dssp HHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHTTGGGCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST
T ss_pred HHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHhhCC-CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc
Confidence 344455556765 4567899999999999999988865 56678899999999999999999999999999999872
Q ss_pred hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhc
Q psy9584 95 SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWT 174 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~ 174 (466)
+.......++.+|.++...|+++.|++.++++++++.+.+++ .. ...++...|.++.. .
T Consensus 179 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------------------~~-~~~~~~~lg~~y~~-~ 237 (383)
T 3ulq_A 179 YNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQP-------------------QL-MGRTLYNIGLCKNS-Q 237 (383)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-------------------HH-HHHHHHHHHHHHHH-T
T ss_pred chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCCh-------------------HH-HHHHHHHHHHHHHH-C
Confidence 256778888999999999999999999999999999998887 22 34455666666666 4
Q ss_pred cccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHH
Q psy9584 175 GSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVT 254 (466)
Q Consensus 175 g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~t 254 (466)
|. +.++++.|-.+++++ ++.
T Consensus 238 g~--~~~A~~~~~~al~~~---------------~~~------------------------------------------- 257 (383)
T 3ulq_A 238 SQ--YEDAIPYFKRAIAVF---------------EES------------------------------------------- 257 (383)
T ss_dssp TC--HHHHHHHHHHHHHHH---------------HHT-------------------------------------------
T ss_pred CC--HHHHHHHHHHHHHHH---------------Hhh-------------------------------------------
Confidence 65 778888888877766 111
Q ss_pred HhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhH
Q psy9584 255 VIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGL 331 (466)
Q Consensus 255 v~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~ 331 (466)
.++...+.+..|+|.+|...|+.. ++++..-.+.++. ......+.+ ..-|.
T Consensus 258 ----------------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~-~~l~~ 311 (383)
T 3ulq_A 258 ----------------------NILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA---GDVIYLSEF-EFLKS 311 (383)
T ss_dssp ----------------------TCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHH-HHHHH
T ss_pred ----------------------ccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHH-HHHHH
Confidence 122334778899999999977432 2333332222110 000111111 11122
Q ss_pred HHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCC
Q psy9584 332 QSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPD 398 (466)
Q Consensus 332 ~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D 398 (466)
.....+++ ..+.+++...+..+...-...++..+|.+|...|++++|.+....++.+.+++.+
T Consensus 312 ~~~~~~~~----~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~~ 374 (383)
T 3ulq_A 312 LYLSGPDE----EAIQGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQG 374 (383)
T ss_dssp HHTSSCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCSS
T ss_pred HHhCCCcH----HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhc
Confidence 22456664 4566666666666777777778889999999999999999999999999999876
No 11
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.37 E-value=4.6e-09 Score=100.83 Aligned_cols=321 Identities=13% Similarity=0.068 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
++..++.+|..++ ...+.++|..++++++..... . ..+...+|.+|...|.+..+...++++++.....+
T Consensus 2 ~~~~~~~~~~~~~-~~g~~~~A~~~~~~~l~~~p~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-- 71 (359)
T 3ieg_A 2 DVEKHLELGKKLL-AAGQLADALSQFHAAVDGDPD---N----YIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFT-- 71 (359)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH--
T ss_pred cHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcc---c----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcc--
Confidence 5678899998864 467899999999999875322 2 36889999999999999999999999999875442
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccc
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQY 178 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~ 178 (466)
..++.+|.++...||++.|++.++.+++.....+ ....+...+..... .
T Consensus 72 --~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~----------------------~------ 120 (359)
T 3ieg_A 72 --AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQ-EEKEAESQLVKADE----------------------M------ 120 (359)
T ss_dssp --HHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHH-HHHHHHHHHHHHHH----------------------H------
T ss_pred --hHHHHHHHHHHHcCChHHHHHHHHHHHhcCCccc-ChHHHHHHHHHHHH----------------------H------
Confidence 5567899999999999999999998876532000 22222222221100 0
Q ss_pred hHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhh
Q psy9584 179 QKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGH 258 (466)
Q Consensus 179 ~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~ 258 (466)
..++ .....+...|+...+...+++.- +. .|. ...++..+..+
T Consensus 121 -----~~~~--~~a~~~~~~~~~~~A~~~~~~~~---~~--~~~----------------------~~~~~~~~~~~--- 163 (359)
T 3ieg_A 121 -----QRLR--SQALDAFDGADYTAAITFLDKIL---EV--CVW----------------------DAELRELRAEC--- 163 (359)
T ss_dssp -----HHHH--HHHHHHHHTTCHHHHHHHHHHHH---HH--CTT----------------------CHHHHHHHHHH---
T ss_pred -----HHHH--HHHHHHHHccCHHHHHHHHHHHH---Hh--CCC----------------------chHHHHHHHHH---
Confidence 0000 01112233333333333332221 11 110 01123333333
Q ss_pred hhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCcccc--ccchh-hHHHH
Q psy9584 259 LKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTS--HSHSL-RAAAY 326 (466)
Q Consensus 259 lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~--~~~~L-~a~~~ 326 (466)
+..+|++.. ++++.. |+. ..+..++|.+|...++.. ++++.+-++.|..... ....+ +....
T Consensus 164 ---~~~~~~~~~A~~~~~~~~~~~--~~~-~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
T 3ieg_A 164 ---FIKEGEPRKAISDLKAASKLK--SDN-TEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKL 237 (359)
T ss_dssp ---HHHTTCHHHHHHHHHHHHTTC--SCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred ---HHHCCCHHHHHHHHHHHHHhC--CCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHH
Confidence 444555433 133221 221 246678999999977433 3444455566642210 00000 01111
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
+..|...+..|++.+|..+++++++.... ........+..+|.++...|++++|.+....++.+ .|+. ..+.
T Consensus 238 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---~~~~---~~~~ 309 (359)
T 3ieg_A 238 IESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM---EPDN---VNAL 309 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTC---HHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---Cccc---HHHH
Confidence 22344458899999999999999997654 45566667889999999999999999999999887 3432 3456
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
..+..+|...|++++|.+.++.-..
T Consensus 310 ~~~~~~~~~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 310 KDRAEAYLIEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 6788999999999999887775443
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.34 E-value=8.6e-10 Score=110.30 Aligned_cols=288 Identities=9% Similarity=-0.026 Sum_probs=197.5
Q ss_pred hcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchh---------HHHHHHHHhhc-hhhhhHHHH
Q psy9584 33 HTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSK---------PILRRAIELSQ-HSIYWHCRL 102 (466)
Q Consensus 33 ~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak---------~~l~k~i~~s~-~~~~W~~~~ 102 (466)
...|++.|+..++..-...+.+....++.+--..+..+.....+.....+ ..+.+.-.... ....-.+.+
T Consensus 24 ~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~l~~~~ 103 (378)
T 3q15_A 24 RQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLETIETPQKKLTGLLKYYS 103 (378)
T ss_dssp HTTCHHHHHHHHHHHHHHGGGBCCCHHHHHHHHHHHHHHHHHHHTCCC--------CHHHHHHHHHGGGHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcCcccccccccchHHHHHHHhccCCCCccHHHHHH
Confidence 47899999999998766555554455555333333444444455555555 66655322222 234556778
Q ss_pred HHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhh
Q psy9584 103 IFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEY 182 (466)
Q Consensus 103 ~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~ 182 (466)
+|.+|..+...||+..|++.++++.+++...+++ .. ...++...|.++-. .|. +.++
T Consensus 104 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------------------~~-~a~~~~~lg~~y~~-~~~--~~~A 160 (378)
T 3q15_A 104 LFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDD-------------------IE-KAEFHFKVAEAYYH-MKQ--THVS 160 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCH-------------------HH-HHHHHHHHHHHHHH-TTC--HHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCCh-------------------HH-HHHHHHHHHHHHHH-cCC--cHHH
Confidence 8889999999999999999999999999887776 22 23445555666555 354 5677
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHH
Q psy9584 183 LKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFF 262 (466)
Q Consensus 183 L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~F 262 (466)
+..|-..+++. + . .+
T Consensus 161 ~~~~~~al~~~---------------~-------~--~~----------------------------------------- 175 (378)
T 3q15_A 161 MYHILQALDIY---------------Q-------N--HP----------------------------------------- 175 (378)
T ss_dssp HHHHHHHHHHH---------------H-------T--ST-----------------------------------------
T ss_pred HHHHHHHHHHH---------------H-------h--CC-----------------------------------------
Confidence 77777766655 1 0 10
Q ss_pred HhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCc--h-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcH
Q psy9584 263 GVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKRE--G-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARY 339 (466)
Q Consensus 263 lv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~--~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~ 339 (466)
..+...+.+..|+|.+|...++- + ++++.+-.+.++ . ......+.+++--|.....+|++
T Consensus 176 --------------~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~lg~~y~~~~~~ 238 (378)
T 3q15_A 176 --------------LYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMD-I--QNDRFIAISLLNIANSYDRSGDD 238 (378)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHHTCH
T ss_pred --------------CchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHCCCH
Confidence 01334667899999999997742 3 333333222111 0 01112233333345555789999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCC-
Q psy9584 340 NEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILND- 418 (466)
Q Consensus 340 ~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~- 418 (466)
++|.+++++++++....+.... +.++..+|.++...|++++|.+....|+.++++.+|..... ...+|..+|...|+
T Consensus 239 ~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~l~~ly~~~~~~ 316 (378)
T 3q15_A 239 QMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKE-LFLFLQAVYKETVDE 316 (378)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHH-HHHHHHHHHSSSCCH
T ss_pred HHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHhCCCcH
Confidence 9999999999999988887777 88999999999999999999999999999999999876655 45889999999998
Q ss_pred --chHHHHHHH
Q psy9584 419 --PVRENEALQ 427 (466)
Q Consensus 419 --~~~~~e~~~ 427 (466)
..++.++++
T Consensus 317 ~~~~~al~~~~ 327 (378)
T 3q15_A 317 RKIHDLLSYFE 327 (378)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 555555444
No 13
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.34 E-value=2.9e-09 Score=105.67 Aligned_cols=340 Identities=16% Similarity=0.106 Sum_probs=208.3
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.+++..|.. . .++..+|.++ ....+.+.|..++++++..... ..+++..||.+|...|.+..+
T Consensus 18 A~~~~~~~~~~~p~~-~--~~~~~l~~~~-~~~~~~~~a~~~~~~a~~~~p~-------~~~~~~~lg~~~~~~g~~~~A 86 (388)
T 1w3b_A 18 AERHCMQLWRQEPDN-T--GVLLLLSSIH-FQCRRLDRSAHFSTLAIKQNPL-------LAEAYSNLGNVYKERGQLQEA 86 (388)
T ss_dssp HHHHHHHHHHHCTTC-H--HHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHhCCCC-H--HHHHHHHHHH-HHcCCHHHHHHHHHHHHhcCCC-------chHHHHHHHHHHHHCCCHHHH
Confidence 556666666554422 2 2345566653 4567788888888888664221 245788889999999988888
Q ss_pred hHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHH
Q psy9584 82 KPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQ 161 (466)
Q Consensus 82 k~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~ 161 (466)
...++++++...+.+ ..++.+|.++...|+++.|++.++.++...- ....+...+..+.. ...+.++...
T Consensus 87 ~~~~~~al~~~p~~~----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p----~~~~~~~~l~~~~~--~~g~~~~A~~ 156 (388)
T 1w3b_A 87 IEHYRHALRLKPDFI----DGYINLAAALVAAGDMEGAVQAYVSALQYNP----DLYCVRSDLGNLLK--ALGRLEEAKA 156 (388)
T ss_dssp HHHHHHHHHHCTTCH----HHHHHHHHHHHHHSCSSHHHHHHHHHHHHCT----TCTHHHHHHHHHHH--TTSCHHHHHH
T ss_pred HHHHHHHHHcCcchH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CcHHHHHHHHHHHH--HccCHHHHHH
Confidence 888888888765442 2345688888888999999888888776532 11222333333221 1122222222
Q ss_pred HHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccC
Q psy9584 162 LLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWM 241 (466)
Q Consensus 162 al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WL 241 (466)
.+.+ +.+. .| .....+.. -...+...|+...+...+++.- +. .|+
T Consensus 157 ~~~~---al~~---~p---~~~~~~~~--l~~~~~~~g~~~~A~~~~~~al---~~--~p~------------------- 201 (388)
T 1w3b_A 157 CYLK---AIET---QP---NFAVAWSN--LGCVFNAQGEIWLAIHHFEKAV---TL--DPN------------------- 201 (388)
T ss_dssp HHHH---HHHH---CT---TCHHHHHH--HHHHHHTTTCHHHHHHHHHHHH---HH--CTT-------------------
T ss_pred HHHH---HHHh---CC---CCHHHHHH--HHHHHHHcCCHHHHHHHHHHHH---hc--CCC-------------------
Confidence 2222 2221 11 11122222 1234556777766666664442 22 221
Q ss_pred cchhHHHHHHHHHHhhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCC
Q psy9584 242 PKEHLYVVVYLVTVIGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPE 312 (466)
Q Consensus 242 pk~~l~aLvyl~tv~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~ 312 (466)
...++..+..+ +...|.... +|++.. |+. ..+..|+|.+|...++.. ++++.+-+++|.
T Consensus 202 ---~~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~--p~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 269 (388)
T 1w3b_A 202 ---FLDAYINLGNV------LKEARIFDRAVAAYLRALSLS--PNH-AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH 269 (388)
T ss_dssp ---CHHHHHHHHHH------HHTTTCTTHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred ---cHHHHHHHHHH------HHHcCCHHHHHHHHHHHHhhC--cCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 12344555555 566666544 244432 222 456789999999988543 355555556664
Q ss_pred ccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHH
Q psy9584 313 TLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQL 392 (466)
Q Consensus 313 ~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~l 392 (466)
.. ... +.-|......|++++|.++++++++..... ..++..+|.++...|++++|.+....++.+
T Consensus 270 ~~-~~~--------~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 334 (388)
T 1w3b_A 270 FP-DAY--------CNLANALKEKGSVAEAEDCYNTALRLCPTH------ADSLNNLANIKREQGNIEEAVRLYRKALEV 334 (388)
T ss_dssp CH-HHH--------HHHHHHHHHHSCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHTTTCHHHHHHHHHHHTTS
T ss_pred CH-HHH--------HHHHHHHHHcCCHHHHHHHHHHHHhhCccc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 21 111 222333377899999999999999875432 346778999999999999999999988765
Q ss_pred hhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 393 ASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 393 AkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
.|+. ..+...+..+|...|++++|.+.++.-.
T Consensus 335 ---~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 366 (388)
T 1w3b_A 335 ---FPEF---AAAHSNLASVLQQQGKLQEALMHYKEAI 366 (388)
T ss_dssp ---CTTC---HHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred ---CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3553 3455678899999999999988776543
No 14
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.32 E-value=4e-09 Score=104.27 Aligned_cols=310 Identities=11% Similarity=0.006 Sum_probs=205.3
Q ss_pred hHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch-hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcCh
Q psy9584 58 DDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH-SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQ 136 (466)
Q Consensus 58 ~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~-~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~ 136 (466)
.+++.++..++|.++...|+++.+...++++++.... .+.+....++.++.++...||++.|.+.++.+..++...|++
T Consensus 10 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 89 (373)
T 1hz4_A 10 DTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW 89 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH
Confidence 4567788899999999999999999999999998753 334566778889999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHH
Q psy9584 137 YTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSIL 216 (466)
Q Consensus 137 ~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q 216 (466)
...+......+.+++...+.++....+.++-.+.+.. +.+........+.. ....+...|+...+...+++.-....
T Consensus 90 ~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~--la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 90 HYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ-HLEQLPMHEFLVRI--RAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCTTSTHHHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-ccccCcHHHHHHHH--HHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 7665554444444443333443344444444444432 22100111111111 12223455666666665543321110
Q ss_pred HhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhC
Q psy9584 217 TIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRG 296 (466)
Q Consensus 217 ~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~ 296 (466)
. .+++. ...+..++|.+|...
T Consensus 167 ---~-------------------------------------------------------~~~~~-~~~~~~~la~~~~~~ 187 (373)
T 1hz4_A 167 ---S-------------------------------------------------------YQPQQ-QLQCLAMLIQCSLAR 187 (373)
T ss_dssp ---T-------------------------------------------------------SCGGG-GHHHHHHHHHHHHHH
T ss_pred ---c-------------------------------------------------------cCcHH-HHHHHHHHHHHHHHc
Confidence 0 11223 446788999999997
Q ss_pred CCchH---HHHHHhhhCCC-ccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHH
Q psy9584 297 KREGD---FAALLERINPE-TLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHI 372 (466)
Q Consensus 297 ~~~~e---~~~~l~~i~~~-~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i 372 (466)
|+..+ +.+....+.+. ..+ ....+......+.....+|++.+|.+++++++...... .......+..+|.+
T Consensus 188 g~~~~A~~~l~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~la~~ 262 (373)
T 1hz4_A 188 GDLDNARSQLNRLENLLGNGKYH---SDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFAN--NHFLQGQWRNIARA 262 (373)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCCC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTT--CGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccCcc---hhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCc--chhhHHHHHHHHHH
Confidence 75433 33333333222 221 11112222233333467999999999999998865432 12223356788999
Q ss_pred HHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Q psy9584 373 FLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQ 434 (466)
Q Consensus 373 ~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s~ 434 (466)
++..|++++|...+..+...+.+.++......+...+..+|...|++++|.+.++.-.....
T Consensus 263 ~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~~~ 324 (373)
T 1hz4_A 263 QILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLAN 324 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998766666778889999999999999987776655543
No 15
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.26 E-value=1.3e-09 Score=107.09 Aligned_cols=289 Identities=15% Similarity=0.088 Sum_probs=185.8
Q ss_pred hhHHHhhcCCC-ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchh
Q psy9584 4 QCLQAVFNFKP-PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSK 82 (466)
Q Consensus 4 ~CLeAvl~~~~-~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak 82 (466)
.+.+..+...+ .|..++...+.+|..++. ..+.++|..++++++.+... . ..+...+|.+|...|.+..+.
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~A~~~~~~al~~~p~---~----~~~~~~lg~~~~~~g~~~~A~ 119 (365)
T 4eqf_A 48 SASEKGYYFHTENPFKDWPGAFEEGLKRLK-EGDLPVTILFMEAAILQDPG---D----AEAWQFLGITQAENENEQAAI 119 (365)
T ss_dssp -----CCCCCSSCTTTTCTTHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhhhcccCCcccchhHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCcC---C----HHHHHHHHHHHHHCCCHHHHH
Confidence 34444444433 455667778888887654 57899999999999876322 2 567899999999999999999
Q ss_pred HHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHH
Q psy9584 83 PILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQL 162 (466)
Q Consensus 83 ~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~a 162 (466)
..++++++...+. ...++.+|.++...|++..|++.++.++.......+..... ......
T Consensus 120 ~~~~~al~~~p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~----------------~~~~~~ 179 (365)
T 4eqf_A 120 VALQRCLELQPNN----LKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNK----------------KGSPGL 179 (365)
T ss_dssp HHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC--------------------------
T ss_pred HHHHHHHhcCCCC----HHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhh----------------ccchHH
Confidence 9999999987544 34566889999999999999999999988654332220000 000011
Q ss_pred HHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCc
Q psy9584 163 LTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMP 242 (466)
Q Consensus 163 l~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLp 242 (466)
....+.+ +...|+...+...+++.- +. .|.
T Consensus 180 ~~~l~~~-------------------------~~~~g~~~~A~~~~~~al---~~--~p~-------------------- 209 (365)
T 4eqf_A 180 TRRMSKS-------------------------PVDSSVLEGVKELYLEAA---HQ--NGD-------------------- 209 (365)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHH---HH--SCS--------------------
T ss_pred HHHHHHH-------------------------HhhhhhHHHHHHHHHHHH---Hh--CcC--------------------
Confidence 1111111 222333333333332221 11 211
Q ss_pred chhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccc
Q psy9584 243 KEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSH 319 (466)
Q Consensus 243 k~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~ 319 (466)
.....+..++|.+|...++-. ++++.+-++.|... ...
T Consensus 210 -------------------------------------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~- 250 (365)
T 4eqf_A 210 -------------------------------------MIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDY-SLW- 250 (365)
T ss_dssp -------------------------------------SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH-HHH-
T ss_pred -------------------------------------ccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH-HHH-
Confidence 001235678999999977433 35555555666421 111
Q ss_pred hhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCCh
Q psy9584 320 SLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDV 399 (466)
Q Consensus 320 ~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~ 399 (466)
+.-|......|++.+|.+++++++++.... ..++..+|.++...|++++|.+....++.+..+..+.
T Consensus 251 -------~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 317 (365)
T 4eqf_A 251 -------NRLGATLANGDRSEEAVEAYTRALEIQPGF------IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQ 317 (365)
T ss_dssp -------HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC---
T ss_pred -------HHHHHHHHHcCCHHHHHHHHHHHHhcCCCc------hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCC
Confidence 223333378999999999999999975443 5578899999999999999999999999999887653
Q ss_pred --------hHHHHHHHHHHHHHHHcCCchHHHH
Q psy9584 400 --------HVQLWASAILKDLYKILNDPVRENE 424 (466)
Q Consensus 400 --------~~qlw~~~lL~~ly~~~g~~~~~~e 424 (466)
...+| ..|..+|...|+++.+.+
T Consensus 318 ~~~~~~~~~~~~~--~~l~~~~~~~g~~~~a~~ 348 (365)
T 4eqf_A 318 QQVPHPAISGNIW--AALRIALSLMDQPELFQA 348 (365)
T ss_dssp ---------CHHH--HHHHHHHHHHTCHHHHHH
T ss_pred cccchhhhHHHHH--HHHHHHHHHcCcHHHHHH
Confidence 12344 467888999999887743
No 16
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.25 E-value=8.7e-09 Score=104.66 Aligned_cols=353 Identities=10% Similarity=-0.019 Sum_probs=211.6
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.+++..| . +.++..+|.+++ ...+.++|..++++++.+. |.. ..+...+|.+|...|.+..+
T Consensus 25 A~~~~~~al~~~p--~--~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~---p~~----~~~~~~l~~~~~~~g~~~~A 92 (514)
T 2gw1_A 25 AIKYYNWALELKE--D--PVFYSNLSACYV-SVGDLKKVVEMSTKALELK---PDY----SKVLLRRASANEGLGKFADA 92 (514)
T ss_dssp HHHHHHHHHHHCC--C--HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHC---SCC----HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCc--c--HHHHHhHHHHHH-HHhhHHHHHHHHHHHhccC---hHH----HHHHHHHHHHHHHHhhHHHH
Confidence 6677777776553 1 456777777654 4677888888888877652 222 25677788888888888888
Q ss_pred hHHHHHHHHhhchhhhhH--------------------------------------------------------------
Q psy9584 82 KPILRRAIELSQHSIYWH-------------------------------------------------------------- 99 (466)
Q Consensus 82 k~~l~k~i~~s~~~~~W~-------------------------------------------------------------- 99 (466)
...++++++.......+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
T 2gw1_A 93 MFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFK 172 (514)
T ss_dssp HHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHHHHHHHTTSC
T ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcC
Confidence 887777766553110000
Q ss_pred -------------HHHHHHHHHHhcc---cccHHHHHHHHHhHHHHHHHh-----c-----ChHHHHHHHHHHHHHHhcc
Q psy9584 100 -------------CRLIFQLAQIHAG---EKDYELASSLLGVGVDYANIS-----N-----AQYTRVLFLLSRCMLLLID 153 (466)
Q Consensus 100 -------------~~~~fqLA~i~~~---~~D~~~A~~~L~~g~~~A~~~-----~-----d~~~~~lf~ls~~~~ll~~ 153 (466)
....+.++..+.. .|++..|++.++.+.+..... + .....+++.++.+....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 250 (514)
T 2gw1_A 173 PELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLK-- 250 (514)
T ss_dssp CCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHC--
Confidence 2233344444443 788888888888877732111 1 22233444444433222
Q ss_pred cCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCC
Q psy9584 154 KKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPN 233 (466)
Q Consensus 154 ~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~ 233 (466)
.+ .+.++....++.+. .|. ..+++. ....+...|+...+...+++.- +. .|.
T Consensus 251 ~~---~~~A~~~~~~~l~~---~~~----~~~~~~--l~~~~~~~~~~~~A~~~~~~~~---~~--~~~----------- 302 (514)
T 2gw1_A 251 ND---PLGAHEDIKKAIEL---FPR----VNSYIY--MALIMADRNDSTEYYNYFDKAL---KL--DSN----------- 302 (514)
T ss_dssp SC---HHHHHHHHHHHHHH---CCC----HHHHHH--HHHHHHTSSCCTTGGGHHHHHH---TT--CTT-----------
T ss_pred CC---HHHHHHHHHHHHhh---Ccc----HHHHHH--HHHHHHHCCCHHHHHHHHHHHh---hc--CcC-----------
Confidence 11 22233333333322 121 222322 2334556677777666664442 11 111
Q ss_pred CCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHH
Q psy9584 234 VGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAA 304 (466)
Q Consensus 234 ~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~ 304 (466)
...++..+..+ +..+|+... ++++...+ ...+..++|.+|...++.. ++++
T Consensus 303 -----------~~~~~~~l~~~------~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~ 362 (514)
T 2gw1_A 303 -----------NSSVYYHRGQM------NFILQNYDQAGKDFDKAKELDPE---NIFPYIQLACLAYRENKFDDCETLFS 362 (514)
T ss_dssp -----------CTHHHHHHHHH------HHHTTCTTHHHHHHHHHHHTCSS---CSHHHHHHHHHTTTTTCHHHHHHHHH
T ss_pred -----------CHHHHHHHHHH------HHHhCCHHHHHHHHHHHHHhChh---hHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 11234444445 667777654 34444222 1347788999999977443 2444
Q ss_pred HHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHh---cCChHH
Q psy9584 305 LLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLS---LGNHRE 381 (466)
Q Consensus 305 ~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~---~~~~~e 381 (466)
.+-++.|... .+++..|...+..|++.+|.++++++++.............++..+|.+++. .|++++
T Consensus 363 ~~~~~~~~~~---------~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 433 (514)
T 2gw1_A 363 EAKRKFPEAP---------EVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIE 433 (514)
T ss_dssp HHHHHSTTCS---------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHH
T ss_pred HHHHHcccCH---------HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHH
Confidence 4444555321 1123334444789999999999999999877665544445578899999999 999999
Q ss_pred HHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 382 SMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 382 a~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
|.+....++.+. |+. ..+...+..+|...|++++|.++++.-..
T Consensus 434 A~~~~~~a~~~~---~~~---~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 477 (514)
T 2gw1_A 434 ATNLLEKASKLD---PRS---EQAKIGLAQMKLQQEDIDEAITLFEESAD 477 (514)
T ss_dssp HHHHHHHHHHHC---TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC---ccc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999874 332 24556788999999999999987765544
No 17
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.25 E-value=1.4e-09 Score=105.98 Aligned_cols=301 Identities=17% Similarity=0.101 Sum_probs=189.5
Q ss_pred cch-hHHHhhcCCC-ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCcc
Q psy9584 2 CIQ-CLQAVFNFKP-PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSN 79 (466)
Q Consensus 2 ai~-CLeAvl~~~~-~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~ 79 (466)
|+. +++.+++..+ .|...+.+.+.+|..++ ...+.++|..++++++.+. +.. ..+...+|.+|...|.+.
T Consensus 44 a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~A~~~~~~al~~~---p~~----~~~~~~l~~~~~~~g~~~ 115 (368)
T 1fch_A 44 LTSATYDKGYQFEEENPLRDHPQPFEEGLRRL-QEGDLPNAVLLFEAAVQQD---PKH----MEAWQYLGTTQAENEQEL 115 (368)
T ss_dssp --CHHHHCCCCCCSSCTTTTCSSHHHHHHHHH-HTTCHHHHHHHHHHHHHSC---TTC----HHHHHHHHHHHHHTTCHH
T ss_pred HHhhhhhHHHhcCCCCcccchHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhC---CCC----HHHHHHHHHHHHHCcCHH
Confidence 455 6666665554 45556677778887754 4668899999999987652 212 457778899999999998
Q ss_pred chhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHH
Q psy9584 80 LSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDA 159 (466)
Q Consensus 80 ~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v 159 (466)
.+...++++++..... ...++.+|.++...|++..|++.++.++........... ....+
T Consensus 116 ~A~~~~~~al~~~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~----------------~~~~~ 175 (368)
T 1fch_A 116 LAISALRRCLELKPDN----QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVT----------------PAEEG 175 (368)
T ss_dssp HHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------------
T ss_pred HHHHHHHHHHhcCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH----------------HHHHH
Confidence 8999999998887544 234567888888899999999998887765432211100 00000
Q ss_pred HHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccc
Q psy9584 160 VQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFI 239 (466)
Q Consensus 160 ~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~ 239 (466)
.+.. ........+..+. ..|+...+...+++.- .. .|.
T Consensus 176 --------------~~~~----~~~~~~~~~~~~~--~~~~~~~A~~~~~~a~---~~--~p~----------------- 213 (368)
T 1fch_A 176 --------------AGGA----GLGPSKRILGSLL--SDSLFLEVKELFLAAV---RL--DPT----------------- 213 (368)
T ss_dssp ----------------------------CTTHHHH--HHHHHHHHHHHHHHHH---HH--STT-----------------
T ss_pred --------------hhhh----cccHHHHHHHHHh--hcccHHHHHHHHHHHH---Hh--CcC-----------------
Confidence 0000 0000000111111 3455555544443331 11 111
Q ss_pred cCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCcccc
Q psy9584 240 WMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTS 316 (466)
Q Consensus 240 WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~ 316 (466)
+. ...+..++|.+|.+.++-. ++++.+-.+.|...
T Consensus 214 --------------------------------------~~--~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-- 251 (368)
T 1fch_A 214 --------------------------------------SI--DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDY-- 251 (368)
T ss_dssp --------------------------------------SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--
T ss_pred --------------------------------------cc--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCH--
Confidence 00 2346678999999977433 35555555666421
Q ss_pred ccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC
Q psy9584 317 HSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKI 396 (466)
Q Consensus 317 ~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~ 396 (466)
.+++.-|......|++.+|.+++++++++.... ..++..+|.++...|++++|.+....++.+..+.
T Consensus 252 -------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 252 -------LLWNKLGATLANGNQSEEAVAAYRRALELQPGY------IRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp -------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred -------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 122333444478999999999999999975432 3467899999999999999999999999998887
Q ss_pred CChhHH-----HHHHHHHHHHHHHcCCchHHHHHHH
Q psy9584 397 PDVHVQ-----LWASAILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 397 ~D~~~q-----lw~~~lL~~ly~~~g~~~~~~e~~~ 427 (466)
.+.... ..+...|..+|...|+++.|...+.
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 354 (368)
T 1fch_A 319 RGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADA 354 (368)
T ss_dssp ------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHT
T ss_pred CCccccccchhhHHHHHHHHHHHHhCChHhHHHhHH
Confidence 433211 2334567899999999999977655
No 18
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.22 E-value=8.2e-08 Score=96.30 Aligned_cols=321 Identities=14% Similarity=0.085 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhh
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIY 97 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~ 97 (466)
..+.+++.+|..++ ...+.++|..++++++..... . ..+...+|.+|...|.+..+...++++++.....
T Consensus 24 ~~~~~~~~~~~~~~-~~g~~~~A~~~~~~~l~~~p~---~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-- 93 (450)
T 2y4t_A 24 ADVEKHLELGKKLL-AAGQLADALSQFHAAVDGDPD---N----YIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDF-- 93 (450)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred HHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCc---c----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc--
Confidence 35677888898755 467899999999999765221 2 6788899999999999999999999999987544
Q ss_pred hHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhcccc
Q psy9584 98 WHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQ 177 (466)
Q Consensus 98 W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~ 177 (466)
...++.+|.++...|+++.|++.++.+........ ....+...+..+. ..
T Consensus 94 --~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~~l~~~~----------------------~~----- 143 (450)
T 2y4t_A 94 --TAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEN-EEKEAQSQLIKSD----------------------EM----- 143 (450)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHH-HHHHHHHHHHHHH----------------------HH-----
T ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh-hhHHHHHHHHHHH----------------------HH-----
Confidence 35567789999999999999999988765322100 0001222111110 00
Q ss_pred chHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhh
Q psy9584 178 YQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIG 257 (466)
Q Consensus 178 ~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~ 257 (466)
.. ++ .....+...|+...+...++++-. . .|. ...++..+..+
T Consensus 144 -----~~-~~--~~a~~~~~~~~~~~A~~~~~~~~~---~--~~~----------------------~~~~~~~l~~~-- 186 (450)
T 2y4t_A 144 -----QR-LR--SQALNAFGSGDYTAAIAFLDKILE---V--CVW----------------------DAELRELRAEC-- 186 (450)
T ss_dssp -----HH-HH--HHHHHHHHHTCHHHHHHHHHHHHH---H--CTT----------------------CHHHHHHHHHH--
T ss_pred -----HH-HH--HHHHHHHHcCCHHHHHHHHHHHHH---h--CCC----------------------ChHHHHHHHHH--
Confidence 00 00 001112223333333333322211 1 110 11223333333
Q ss_pred hhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchh----hHH
Q psy9584 258 HLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSL----RAA 324 (466)
Q Consensus 258 ~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L----~a~ 324 (466)
+...|+... ++++.. ++ ...+..++|.+|...++.. ++++.+-.+.|.... ....+ +..
T Consensus 187 ----~~~~g~~~~A~~~~~~~~~~~--~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~-~~~~~~~~~~~~ 258 (450)
T 2y4t_A 187 ----FIKEGEPRKAISDLKAASKLK--ND-NTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKR-CFAHYKQVKKLN 258 (450)
T ss_dssp ----HHHTTCGGGGHHHHHHHHHHH--CS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHH
T ss_pred ----HHHCCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHH-HHHHHHHHHHHH
Confidence 455555533 133321 11 1356778899999977433 344444556664221 11111 000
Q ss_pred HHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHH
Q psy9584 325 AYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLW 404 (466)
Q Consensus 325 ~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw 404 (466)
..+..|...+..|++.+|.+++++++++... ........+..+|.++...|++++|.+....++.+. |+. ..
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~---p~~---~~ 330 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME---PDN---VN 330 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC---TTC---HH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC---ccc---HH
Confidence 0011244447899999999999999996544 344455678899999999999999999999998873 432 24
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 405 ASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 405 ~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
+...+..+|...|++++|.++++.-..
T Consensus 331 ~~~~l~~~~~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 331 ALKDRAEAYLIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 455688899999999999988776543
No 19
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.22 E-value=4.5e-08 Score=99.41 Aligned_cols=348 Identities=11% Similarity=0.065 Sum_probs=220.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhh
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSI 96 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~ 96 (466)
.-+|.++...|..++ ...+.++|...+++++.+. | + ..+...+|.+|...|.+..+...++++++...+.
T Consensus 3 ~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~---p---~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~- 72 (514)
T 2gw1_A 3 DKYALALKDKGNQFF-RNKKYDDAIKYYNWALELK---E---D--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDY- 72 (514)
T ss_dssp HHHHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHC---C---C--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCC-
T ss_pred chhHHHHHHHHHHHH-HhccHHHHHHHHHHHHhcC---c---c--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHH-
Confidence 457888999998865 4578999999999998863 2 1 5689999999999999999999999999987544
Q ss_pred hhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHH--------------------------------
Q psy9584 97 YWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLL-------------------------------- 144 (466)
Q Consensus 97 ~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~l-------------------------------- 144 (466)
...++.+|.++...|++..|++.++.+..............+-.+
T Consensus 73 ---~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 149 (514)
T 2gw1_A 73 ---SKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAK 149 (514)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC--------------------
T ss_pred ---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhh
Confidence 356678999999999999999999988765431111111111111
Q ss_pred -----------------------------------------HHHHHHhcccCccHHHHHHHHHhhHhhh----hccccch
Q psy9584 145 -----------------------------------------SRCMLLLIDKKVNDAVQLLTQAGYQVEN----WTGSQYQ 179 (466)
Q Consensus 145 -----------------------------------------s~~~~ll~~~~~~~v~~al~~~~~l~~~----~~g~~~~ 179 (466)
..+...+.....+..+.++....++.+. ..+.|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 229 (514)
T 2gw1_A 150 ERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNED 229 (514)
T ss_dssp -------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTC
T ss_pred HHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccc
Confidence 1111111100111122222222222220 0001111
Q ss_pred ----HhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHH
Q psy9584 180 ----KEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTV 255 (466)
Q Consensus 180 ----~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv 255 (466)
.....+++ .....+...|+...+...+++.- +. . |. ..++..+..+
T Consensus 230 ~~~~~~~~~~~~--~~~~~~~~~~~~~~A~~~~~~~l---~~--~---------------------~~--~~~~~~l~~~ 279 (514)
T 2gw1_A 230 EKLKEKLAISLE--HTGIFKFLKNDPLGAHEDIKKAI---EL--F---------------------PR--VNSYIYMALI 279 (514)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHSSCHHHHHHHHHHHH---HH--C---------------------CC--HHHHHHHHHH
T ss_pred cccChHHHHHHH--HHHHHHHHCCCHHHHHHHHHHHH---hh--C---------------------cc--HHHHHHHHHH
Confidence 11122222 22334555677666666654442 22 1 11 3345555555
Q ss_pred hhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHH
Q psy9584 256 IGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAY 326 (466)
Q Consensus 256 ~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~ 326 (466)
+...|+... ++++.. ++. ..+..++|.+|...++.. +++..+-++.|... . +.
T Consensus 280 ------~~~~~~~~~A~~~~~~~~~~~--~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~--------~~ 341 (514)
T 2gw1_A 280 ------MADRNDSTEYYNYFDKALKLD--SNN-SSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENI-F--------PY 341 (514)
T ss_dssp ------HHTSSCCTTGGGHHHHHHTTC--TTC-THHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS-H--------HH
T ss_pred ------HHHCCCHHHHHHHHHHHhhcC--cCC-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH-H--------HH
Confidence 677777654 244432 111 236788999999977433 35554545566421 1 12
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
+..|...+..|++.+|.++++++++..... ..++..+|.++...|++++|.+....++.+..+.++......+.
T Consensus 342 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 415 (514)
T 2gw1_A 342 IQLACLAYRENKFDDCETLFSEAKRKFPEA------PEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPL 415 (514)
T ss_dssp HHHHHHTTTTTCHHHHHHHHHHHHHHSTTC------SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHcccC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHH
Confidence 333444478999999999999999865432 24677899999999999999999999999999888754444466
Q ss_pred HHHHHHHHH---cCCchHHHHHHHHHHH
Q psy9584 407 AILKDLYKI---LNDPVRENEALQMHCN 431 (466)
Q Consensus 407 ~lL~~ly~~---~g~~~~~~e~~~~~~~ 431 (466)
..+..+|.. .|++++|.+.++.-..
T Consensus 416 ~~l~~~~~~~~~~~~~~~A~~~~~~a~~ 443 (514)
T 2gw1_A 416 VGKATLLTRNPTVENFIEATNLLEKASK 443 (514)
T ss_dssp HHHHHHHHTSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 777889999 9999999887765443
No 20
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.16 E-value=2.6e-08 Score=102.10 Aligned_cols=346 Identities=12% Similarity=0.067 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
.+.....+|..++ ...+.++|..++++++.+... . ..+...+|.+|...|.+..+...++++++...+.
T Consensus 24 ~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~---~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~--- 92 (537)
T 3fp2_A 24 YAVQLKNRGNHFF-TAKNFNEAIKYYQYAIELDPN---E----PVFYSNISACYISTGDLEKVIEFTTKALEIKPDH--- 92 (537)
T ss_dssp HHHHHHHHHHHHH-HTTCCC-CHHHHHHHHHHCTT---C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhCCC---C----cHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCch---
Confidence 5788888998754 467899999999999876322 2 4788999999999999999999999999987544
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHH-----------------------------------
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFL----------------------------------- 143 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~----------------------------------- 143 (466)
...++.+|.++...|++..|++.++ .+.......+..+..+..
T Consensus 93 -~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 170 (537)
T 3fp2_A 93 -SKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASF 170 (537)
T ss_dssp -HHHHHHHHHHHHHHTCHHHHHHHHH-HHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHH
Confidence 3456789999999999999999995 443322222211110000
Q ss_pred -------------------------HHHHHHHhcccCcc-------HHHHHHHHHhhHhhhhccccchHh-hHHHHHHHH
Q psy9584 144 -------------------------LSRCMLLLIDKKVN-------DAVQLLTQAGYQVENWTGSQYQKE-YLKVFFLVL 190 (466)
Q Consensus 144 -------------------------ls~~~~ll~~~~~~-------~v~~al~~~~~l~~~~~g~~~~~e-~L~~~~~~L 190 (466)
+...+..+.....+ ....++....++.+.-+..+.... ....++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~-- 248 (537)
T 3fp2_A 171 FGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCY-- 248 (537)
T ss_dssp HHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHH--
T ss_pred HHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHH--
Confidence 11111111000000 111222222222222111110000 0111221
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhh
Q psy9584 191 QVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGT 270 (466)
Q Consensus 191 ~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~ 270 (466)
....+...|+...+...+++.-. . .| . ..++..+..+ +...|+...
T Consensus 249 ~g~~~~~~~~~~~A~~~~~~~~~---~--~~---------------------~--~~~~~~l~~~------~~~~~~~~~ 294 (537)
T 3fp2_A 249 TGIFHFLKNNLLDAQVLLQESIN---L--HP---------------------T--PNSYIFLALT------LADKENSQE 294 (537)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH---H--CC---------------------C--HHHHHHHHHH------TCCSSCCHH
T ss_pred HHHHHHhcccHHHHHHHHHHHHh---c--CC---------------------C--chHHHHHHHH------HHHhcCHHH
Confidence 22344556777666666654432 2 21 1 2335555555 666776654
Q ss_pred ------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHH
Q psy9584 271 ------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNE 341 (466)
Q Consensus 271 ------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~e 341 (466)
++++.. ++ ...+..++|.+|...++.. ++++.+-++.|... .. ++.-|...+..|++.+
T Consensus 295 A~~~~~~~~~~~--~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~-~~--------~~~la~~~~~~g~~~~ 362 (537)
T 3fp2_A 295 FFKFFQKAVDLN--PE-YPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENV-YP--------YIQLACLLYKQGKFTE 362 (537)
T ss_dssp HHHHHHHHHHHC--TT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCS-HH--------HHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhccC--CC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HH--------HHHHHHHHHHcCCHHH
Confidence 244432 22 2346788999999977433 35555555666422 11 1223333478999999
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHc-----
Q psy9584 342 AKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKIL----- 416 (466)
Q Consensus 342 Ak~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~----- 416 (466)
|..+++++++..... ..++..+|.++...|++++|.+....++.+....++....+-....+..+|...
T Consensus 363 A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 436 (537)
T 3fp2_A 363 SEAFFNETKLKFPTL------PEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDP 436 (537)
T ss_dssp HHHHHHHHHHHCTTC------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhCCCC------hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999875433 235678899999999999999999999999988888765554455566788888
Q ss_pred -----CCchHHHHHHHHHHH
Q psy9584 417 -----NDPVRENEALQMHCN 431 (466)
Q Consensus 417 -----g~~~~~~e~~~~~~~ 431 (466)
|++++|.++++.-..
T Consensus 437 ~~~~~~~~~~A~~~~~~a~~ 456 (537)
T 3fp2_A 437 TQLDEEKFNAAIKLLTKACE 456 (537)
T ss_dssp --CCHHHHHHHHHHHHHHHH
T ss_pred hhhhHhHHHHHHHHHHHHHH
Confidence 999999887765443
No 21
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.15 E-value=9.2e-08 Score=91.69 Aligned_cols=319 Identities=12% Similarity=0.021 Sum_probs=199.8
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.+++..|.. +.++..+|.++ ....+.++|..++++++.+. +... .+...+|.+|...|.+..+
T Consensus 22 A~~~~~~~l~~~p~~---~~~~~~~a~~~-~~~~~~~~A~~~~~~~~~~~---~~~~----~~~~~l~~~~~~~~~~~~A 90 (359)
T 3ieg_A 22 ALSQFHAAVDGDPDN---YIAYYRRATVF-LAMGKSKAALPDLTKVIALK---MDFT----AARLQRGHLLLKQGKLDEA 90 (359)
T ss_dssp HHHHHHHHHHHCTTC---HHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHC---TTCH----HHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHhhCccc---HHHHHHHHHHH-HHccCHHHHHHHHHHHHHhC---CCcc----hHHHHHHHHHHHcCChHHH
Confidence 678888888765532 35778888775 45788999999999998762 2222 6789999999999999999
Q ss_pred hHHHHHHHHhhc---hhhhhHHHH--------HHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy9584 82 KPILRRAIELSQ---HSIYWHCRL--------IFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLL 150 (466)
Q Consensus 82 k~~l~k~i~~s~---~~~~W~~~~--------~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~l 150 (466)
...++++++... ..+.....+ .+.+|.++...|++..|++.++.+.+... + ...+++.++.++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--~--~~~~~~~~~~~~~~ 166 (359)
T 3ieg_A 91 EDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCV--W--DAELRELRAECFIK 166 (359)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--T--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--C--chHHHHHHHHHHHH
Confidence 999999998765 332222222 34568999999999999999999887643 2 23555555555544
Q ss_pred hcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccC
Q psy9584 151 LIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVS 230 (466)
Q Consensus 151 l~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~ 230 (466)
+.. .+.++.......+..+.. ..+++..- ..+...|+...+...+++.- +. .|.
T Consensus 167 ~~~-----~~~A~~~~~~~~~~~~~~------~~~~~~la--~~~~~~~~~~~A~~~~~~a~---~~--~~~-------- 220 (359)
T 3ieg_A 167 EGE-----PRKAISDLKAASKLKSDN------TEAFYKIS--TLYYQLGDHELSLSEVRECL---KL--DQD-------- 220 (359)
T ss_dssp TTC-----HHHHHHHHHHHHTTCSCC------HHHHHHHH--HHHHHHTCHHHHHHHHHHHH---HH--CTT--------
T ss_pred CCC-----HHHHHHHHHHHHHhCCCC------HHHHHHHH--HHHHHcCCHHHHHHHHHHHH---hh--Ccc--------
Confidence 322 223333333333321111 12333322 23445677766666554442 22 221
Q ss_pred CCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHh
Q psy9584 231 GPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLE 307 (466)
Q Consensus 231 ~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~ 307 (466)
. ..+..++..+ ......+++|.+|.+.++.. ++++.+-
T Consensus 221 -----~---------~~~~~~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 261 (359)
T 3ieg_A 221 -----H---------KRCFAHYKQV-------------------------KKLNKLIESAEELIRDGRYTDATSKYESVM 261 (359)
T ss_dssp -----C---------HHHHHHHHHH-------------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----c---------hHHHHHHHHH-------------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 0 0001111111 12234567899999977433 3455455
Q ss_pred hhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhH
Q psy9584 308 RINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVT 387 (466)
Q Consensus 308 ~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~ 387 (466)
.+.|.. ......+++..|...+..|++.+|.++++++++..... ..++..+|.++...|++++|.+...
T Consensus 262 ~~~~~~-----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~A~~~~~ 330 (359)
T 3ieg_A 262 KTEPSV-----AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDN------VNALKDRAEAYLIEEMYDEAIQDYE 330 (359)
T ss_dssp HHCCSS-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCCCc-----hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 556641 11222222334445578999999999999999974322 3478899999999999999999999
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHHHHcC
Q psy9584 388 PAMQLASKIPDVHVQLWASAILKDLYKILN 417 (466)
Q Consensus 388 ~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g 417 (466)
.+..+..+.+ .+...|.+++...+
T Consensus 331 ~a~~~~p~~~------~~~~~l~~~~~~~~ 354 (359)
T 3ieg_A 331 AAQEHNENDQ------QIREGLEKAQRLLK 354 (359)
T ss_dssp HHHTTCTTCH------HHHHHHHHHHHHHH
T ss_pred HHHhcCCCCh------HHHHHHHHHHHHHH
Confidence 9998754332 23445555555443
No 22
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.13 E-value=4.5e-08 Score=100.38 Aligned_cols=354 Identities=8% Similarity=-0.012 Sum_probs=213.2
Q ss_pred CcchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccc
Q psy9584 1 MCIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNL 80 (466)
Q Consensus 1 ~ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ 80 (466)
.|+.+++.+++..|.. +.++..+|.+++ ...+.++|...+++++.+. +.. ..+...+|.+|...|.+..
T Consensus 43 ~A~~~~~~al~~~p~~---~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~---p~~----~~~~~~la~~~~~~g~~~~ 111 (537)
T 3fp2_A 43 EAIKYYQYAIELDPNE---PVFYSNISACYI-STGDLEKVIEFTTKALEIK---PDH----SKALLRRASANESLGNFTD 111 (537)
T ss_dssp -CHHHHHHHHHHCTTC---HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHC---TTC----HHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHhhCCCC---cHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcC---Cch----HHHHHHHHHHHHHcCCHHH
Confidence 3788998888766532 467888888754 5789999999999998763 222 3578899999999999988
Q ss_pred hhHHHHHHHHhhchhh-hh-------------------------------------------------------------
Q psy9584 81 SKPILRRAIELSQHSI-YW------------------------------------------------------------- 98 (466)
Q Consensus 81 ak~~l~k~i~~s~~~~-~W------------------------------------------------------------- 98 (466)
+...++ ++....+.. .|
T Consensus 112 A~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (537)
T 3fp2_A 112 AMFDLS-VLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYD 190 (537)
T ss_dssp HHHHHH-HHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSC
T ss_pred HHHHHH-HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHHHhhccccc
Confidence 888774 443221100 00
Q ss_pred --HHHHHHHHHHHhcc--------cccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHH-----HhcccCccHHHHHH
Q psy9584 99 --HCRLIFQLAQIHAG--------EKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCML-----LLIDKKVNDAVQLL 163 (466)
Q Consensus 99 --~~~~~fqLA~i~~~--------~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~-----ll~~~~~~~v~~al 163 (466)
...+...++.++.. .+++..|++.++..++... +++. +...++.++. +....+. +.++
T Consensus 191 ~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p--~~~~--~~~~~~~~~~~~g~~~~~~~~~---~~A~ 263 (537)
T 3fp2_A 191 TAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANT--VDDP--LRENAALALCYTGIFHFLKNNL---LDAQ 263 (537)
T ss_dssp SSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--C--CCHH--HHHHHHHHHHHHHHHHHHTTCH---HHHH
T ss_pred cHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCC--Ccch--hhHHHHHHHHHHHHHHHhcccH---HHHH
Confidence 00022333444322 2467777777766665443 2222 2222222222 1122222 2333
Q ss_pred HHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcc
Q psy9584 164 TQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPK 243 (466)
Q Consensus 164 ~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk 243 (466)
......++. .|. ...++.. ...+...|+...+...+++.- +. .|.
T Consensus 264 ~~~~~~~~~---~~~----~~~~~~l--~~~~~~~~~~~~A~~~~~~~~---~~--~~~--------------------- 308 (537)
T 3fp2_A 264 VLLQESINL---HPT----PNSYIFL--ALTLADKENSQEFFKFFQKAV---DL--NPE--------------------- 308 (537)
T ss_dssp HHHHHHHHH---CCC----HHHHHHH--HHHTCCSSCCHHHHHHHHHHH---HH--CTT---------------------
T ss_pred HHHHHHHhc---CCC----chHHHHH--HHHHHHhcCHHHHHHHHHHHh---cc--CCC---------------------
Confidence 333333332 121 2333332 223466777777776665542 22 221
Q ss_pred hhHHHHHHHHHHhhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCcc
Q psy9584 244 EHLYVVVYLVTVIGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETL 314 (466)
Q Consensus 244 ~~l~aLvyl~tv~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~ 314 (466)
...++..+..+ +..+|++.. +|++.. |+. ..+..++|.+|...++.. ++++.+-++.|...
T Consensus 309 -~~~~~~~l~~~------~~~~~~~~~A~~~~~~a~~~~--~~~-~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~ 378 (537)
T 3fp2_A 309 -YPPTYYHRGQM------YFILQDYKNAKEDFQKAQSLN--PEN-VYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLP 378 (537)
T ss_dssp -CHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHC--TTC-SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred -CHHHHHHHHHH------HHhcCCHHHHHHHHHHHHHhC--CCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 12335555555 677777754 244442 211 246788999999987543 34444445555321
Q ss_pred ccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhc----------CChHHHHH
Q psy9584 315 TSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSL----------GNHRESMN 384 (466)
Q Consensus 315 ~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~----------~~~~ea~~ 384 (466)
. +++..|......|++.+|.+++++++++.............+..+|.++... |++++|.+
T Consensus 379 -~--------~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~ 449 (537)
T 3fp2_A 379 -E--------VPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIK 449 (537)
T ss_dssp -H--------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHH
T ss_pred -H--------HHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHH
Confidence 1 1122344447899999999999999999877665554444567788899988 99999999
Q ss_pred hhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q psy9584 385 MVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFS 433 (466)
Q Consensus 385 ~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s 433 (466)
....++.+.. +. .++...+..+|...|++++|.++++.-..+.
T Consensus 450 ~~~~a~~~~p---~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 450 LLTKACELDP---RS---EQAKIGLAQLKLQMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHCT---TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCC---CC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 9999998753 32 2456778899999999999999888766553
No 23
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.12 E-value=3.7e-09 Score=97.96 Aligned_cols=258 Identities=14% Similarity=0.068 Sum_probs=161.4
Q ss_pred cCCHHHHHHHHHHHHHHHhccccch-HHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch----hhhhHHHHHHHHHH
Q psy9584 34 TKNIDLARNHLEQAWHLSQSINAFD-DVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH----SIYWHCRLIFQLAQ 108 (466)
Q Consensus 34 T~N~~~A~~hLeka~~L~~~~~~~~-d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~----~~~W~~~~~fqLA~ 108 (466)
+.+++.|..++++|+.+.++...-+ .....+...||.+|...|.+..+...++++++..+. ........+..+|.
T Consensus 14 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 93 (283)
T 3edt_B 14 LVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAV 93 (283)
T ss_dssp CSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 5678999999999999887654333 567889999999999999999999999999999742 24567888889999
Q ss_pred HhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHH
Q psy9584 109 IHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFL 188 (466)
Q Consensus 109 i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~ 188 (466)
++...||++.|++.++++++++.+.+++ +......++...+.+.-. .|. +.+++..|-.
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~~~~~~~------------------~~~~~~~~~~~la~~~~~-~g~--~~~A~~~~~~ 152 (283)
T 3edt_B 94 LYGKRGKYKEAEPLCKRALEIREKVLGK------------------FHPDVAKQLNNLALLCQN-QGK--AEEVEYYYRR 152 (283)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHCT------------------TCHHHHHHHHHHHHHHHT-TTC--HHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHcCC------------------CChHHHHHHHHHHHHHHH-cCC--HHHHHHHHHH
Confidence 9999999999999999999999876543 012223444455555544 344 5667777777
Q ss_pred HHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCch
Q psy9584 189 VLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTA 268 (466)
Q Consensus 189 ~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~ 268 (466)
+++++ +. . ..+
T Consensus 153 al~~~---------------~~------~-~~~----------------------------------------------- 163 (283)
T 3edt_B 153 ALEIY---------------AT------R-LGP----------------------------------------------- 163 (283)
T ss_dssp HHHHH---------------HH------H-SCT-----------------------------------------------
T ss_pred HHHHH---------------HH------h-cCC-----------------------------------------------
Confidence 66655 11 1 121
Q ss_pred hhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCC-ccccccchhhHHHHHHHhHHHhhhhcHHHHHH
Q psy9584 269 GTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPE-TLTSHSHSLRAAAYYVQGLQSFFQARYNEAKR 344 (466)
Q Consensus 269 ~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~-~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~ 344 (466)
+......+..|+|.+|...++.. ++++..-.+.++ ......... ..+....+......+.+.++..
T Consensus 164 ---------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T 3edt_B 164 ---------DDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDN-KPIWMHAEEREESKDKRRDSAP 233 (283)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSC-CCHHHHHHHHHHTTCCCCC---
T ss_pred ---------CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhH-HHHHHHHHHHHhcCCchhHHHH
Confidence 23344567889999999977433 233333222211 111101111 1111111111122222222222
Q ss_pred HHHHHHHhhhhh-hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHH
Q psy9584 345 YLRETLKMANAE-DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQL 392 (466)
Q Consensus 345 ~lre~lk~a~~~-~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~l 392 (466)
+.++....... ....-...++..+|.+|...|++++|.++...++.+
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 234 -YGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp ----------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 22222222222 234556667889999999999999999999888765
No 24
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.12 E-value=1.1e-07 Score=95.26 Aligned_cols=304 Identities=13% Similarity=0.035 Sum_probs=189.6
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.+++..|.. +.++..+|.+++ ...+.++|..++++++.+... . ..++..+|.+|...|.+..+
T Consensus 45 A~~~~~~~l~~~p~~---~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~---~----~~~~~~l~~~~~~~g~~~~A 113 (450)
T 2y4t_A 45 ALSQFHAAVDGDPDN---YIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMD---F----TAARLQRGHLLLKQGKLDEA 113 (450)
T ss_dssp HHHHHHHHHHHCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhCCcc---HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCC---c----HHHHHHHHHHHHHcCCHHHH
Confidence 677787777654432 667788888754 467899999999999876322 2 46788999999999999999
Q ss_pred hHHHHHHHHhhchhh----hhHH-------HHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy9584 82 KPILRRAIELSQHSI----YWHC-------RLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLL 150 (466)
Q Consensus 82 k~~l~k~i~~s~~~~----~W~~-------~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~l 150 (466)
...++++++.....+ .|.. .-.+.+|.++...|++..|++.++.+.+... ....+++.++.+...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~----~~~~~~~~l~~~~~~ 189 (450)
T 2y4t_A 114 EDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV----WDAELRELRAECFIK 189 (450)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHH
Confidence 999999998775432 2221 1245678889999999999999999886532 233455555555443
Q ss_pred hcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccC
Q psy9584 151 LIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVS 230 (466)
Q Consensus 151 l~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~ 230 (466)
+.. .++....+.++-.+.+ . ...+++.. ...+...|+...+...+++.- +. .|+
T Consensus 190 ~g~--~~~A~~~~~~~~~~~~---~------~~~~~~~l--~~~~~~~g~~~~A~~~~~~~~---~~--~p~-------- 243 (450)
T 2y4t_A 190 EGE--PRKAISDLKAASKLKN---D------NTEAFYKI--STLYYQLGDHELSLSEVRECL---KL--DQD-------- 243 (450)
T ss_dssp TTC--GGGGHHHHHHHHHHHC---S------CHHHHHHH--HHHHHHTTCHHHHHHHHHHHH---HH--CTT--------
T ss_pred CCC--HHHHHHHHHHHHHhCC---C------CHHHHHHH--HHHHHHcCCHHHHHHHHHHHH---Hh--CCC--------
Confidence 322 2222233333322211 1 12233332 223445677776666665543 11 221
Q ss_pred CCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHh
Q psy9584 231 GPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLE 307 (466)
Q Consensus 231 ~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~ 307 (466)
...+...+..+ ......+++|.+|...++-. ++++.+-
T Consensus 244 --------------~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l 284 (450)
T 2y4t_A 244 --------------HKRCFAHYKQV-------------------------KKLNKLIESAEELIRDGRYTDATSKYESVM 284 (450)
T ss_dssp --------------CHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred --------------hHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 00001000000 01123466788998877433 3555555
Q ss_pred hhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhH
Q psy9584 308 RINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVT 387 (466)
Q Consensus 308 ~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~ 387 (466)
.+.|. +.......++.-|......|++.+|.+++++++++.... ..++..+|.++...|++++|.+...
T Consensus 285 ~~~p~-----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~------~~~~~~l~~~~~~~~~~~~A~~~~~ 353 (450)
T 2y4t_A 285 KTEPS-----IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDN------VNALKDRAEAYLIEEMYDEAIQDYE 353 (450)
T ss_dssp HHCCS-----SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCCc-----chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 56664 111112233334444478999999999999999874432 3567889999999999999999999
Q ss_pred HHHHHhhcC
Q psy9584 388 PAMQLASKI 396 (466)
Q Consensus 388 ~a~~lAkK~ 396 (466)
.++.+....
T Consensus 354 ~al~~~p~~ 362 (450)
T 2y4t_A 354 TAQEHNEND 362 (450)
T ss_dssp HHHTTSSSC
T ss_pred HHHHhCcch
Confidence 999865443
No 25
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.11 E-value=2.7e-09 Score=90.10 Aligned_cols=155 Identities=17% Similarity=0.095 Sum_probs=124.7
Q ss_pred cchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhh
Q psy9584 277 QERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMA 353 (466)
Q Consensus 277 ~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a 353 (466)
+|+...+.+..++|.+|...++-. +++...-++.+. .......+.+++.-|...+..+++++|.+++++++++.
T Consensus 3 ~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 79 (164)
T 3ro3_A 3 GSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE---FGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLA 79 (164)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH---hCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 567788889999999999977433 233333222221 11122234444556666689999999999999999999
Q ss_pred hhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q psy9584 354 NAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFS 433 (466)
Q Consensus 354 ~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s 433 (466)
...+.....+.++..+|.++...|++++|.+....++.++++.+|.....++...+..+|...|++++|.++++....+.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 80 RQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 99888888899999999999999999999999999999999999999999999999999999999999988887766554
Q ss_pred H
Q psy9584 434 Q 434 (466)
Q Consensus 434 ~ 434 (466)
+
T Consensus 160 ~ 160 (164)
T 3ro3_A 160 R 160 (164)
T ss_dssp T
T ss_pred H
Confidence 3
No 26
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.11 E-value=2.7e-08 Score=100.91 Aligned_cols=372 Identities=11% Similarity=0.030 Sum_probs=199.1
Q ss_pred cchhHHHhhc--C-CCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHhC
Q psy9584 2 CIQCLQAVFN--F-KPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAF--DDVKFEAASVLAELYETQL 76 (466)
Q Consensus 2 ai~CLeAvl~--~-~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~--~d~K~~a~slLa~~y~~~~ 76 (466)
++.+++..+. . ..++...|.+++-||.+++ .-.+.++|..++++|+.+.+....- +--...+++.||.+|...|
T Consensus 30 ~l~~~e~~~~~~~~~~~~~~~a~~yn~Lg~~~~-~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g 108 (472)
T 4g1t_A 30 SLDDFEDKVFYRTEFQNREFKATMCNLLAYLKH-LKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMG 108 (472)
T ss_dssp CHHHHHHHHHHHTTSCC---CCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcC
Confidence 3556644432 1 2255667888999998843 3467999999999999987654321 1233567889999999999
Q ss_pred CccchhHHHHHHHHhhchh----hhhHHHHHHHHH--HHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy9584 77 LSNLSKPILRRAIELSQHS----IYWHCRLIFQLA--QIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLL 150 (466)
Q Consensus 77 ~~~~ak~~l~k~i~~s~~~----~~W~~~~~fqLA--~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~l 150 (466)
.+..|...+++++++.+.. ..-....+..++ -+....++|+.|++.+++++.+.- +++ .+...++.+...
T Consensus 109 ~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p--~~~--~~~~~~~~~~~~ 184 (472)
T 4g1t_A 109 RLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP--KNP--EFTSGLAIASYR 184 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST--TCH--HHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC--CCH--HHHHHHHHHHHH
Confidence 9999999999999887521 011123334443 344567899999999999887743 233 334444444433
Q ss_pred hcc-cCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCcc
Q psy9584 151 LID-KKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVV 229 (466)
Q Consensus 151 l~~-~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~ 229 (466)
+.. .+..+.-..+.++-++.+. . . ......-..-.-.+...|+...+..++++. ... .|.
T Consensus 185 l~~~~~~~~al~~~~~al~l~p~---~---~-~~~~~l~~~~~~~~~~~~~~~~a~~~~~~a---l~~--~~~------- 245 (472)
T 4g1t_A 185 LDNWPPSQNAIDPLRQAIRLNPD---N---Q-YLKVLLALKLHKMREEGEEEGEGEKLVEEA---LEK--APG------- 245 (472)
T ss_dssp HHHSCCCCCTHHHHHHHHHHCSS---C---H-HHHHHHHHHHHHCC------CHHHHHHHHH---HHH--CSS-------
T ss_pred hcCchHHHHHHHHHHHHhhcCCc---c---h-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---HHh--Ccc-------
Confidence 321 1111112223333222221 1 1 111111100001112234455555554433 222 221
Q ss_pred CCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCC-----
Q psy9584 230 SGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKR----- 298 (466)
Q Consensus 230 ~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~----- 298 (466)
...++..+..+ |...|.... +|++.. |+ .+.++.|+|.+|...+.
T Consensus 246 ---------------~~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~~lg~~y~~~~~~~~~~ 301 (472)
T 4g1t_A 246 ---------------VTDVLRSAAKF------YRRKDEPDKAIELLKKALEYI--PN-NAYLHCQIGCCYRAKVFQVMNL 301 (472)
T ss_dssp ---------------CHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHS--TT-CHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------HHHHHHHHHHH------HHHcCchHHHHHHHHHHHHhC--CC-hHHHHHHHHHHHHHHHHHhhhH
Confidence 23345566666 777777755 355442 22 23567788888865320
Q ss_pred ----------------ch-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhH
Q psy9584 299 ----------------EG-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRL 361 (466)
Q Consensus 299 ----------------~~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l 361 (466)
.+ +.++..-.++|.. +.....+ |.+ | ...+++.+|..++++++++....+....
T Consensus 302 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l-g~~-~------~~~~~~~~A~~~~~kaL~~~~~~~~~~~ 372 (472)
T 4g1t_A 302 RENGMYGKRKLLELIGHAVAHLKKADEANDNL-FRVCSIL-ASL-H------ALADQYEEAEYYFQKEFSKELTPVAKQL 372 (472)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHCTTT-CCCHHHH-HHH-H------HHTTCHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhcCCch-hhhhhhH-HHH-H------HHhccHHHHHHHHHHHHhcCCCChHHHH
Confidence 00 1233333445532 1222223 433 3 7899999999999999987544333222
Q ss_pred HHhHHHHHHHH-HHhcCChHHHHHhhHHHHHHhhcCCChhH------------------HHHHHHHHHHHHHHcCCchHH
Q psy9584 362 TSCSLVLLGHI-FLSLGNHRESMNMVTPAMQLASKIPDVHV------------------QLWASAILKDLYKILNDPVRE 422 (466)
Q Consensus 362 ~~~~l~llg~i-~l~~~~~~ea~~~~~~a~~lAkK~~D~~~------------------qlw~~~lL~~ly~~~g~~~~~ 422 (466)
.+..+|.+ ....|++++|......|+.+..++.+..- ..++...|..+|...||+++|
T Consensus 373 ---~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A 449 (472)
T 4g1t_A 373 ---LHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQA 449 (472)
T ss_dssp ---HHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC--
T ss_pred ---HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 22334443 45789999999998888876544322110 134566788999999999999
Q ss_pred HHHHHHHHHHH
Q psy9584 423 NEALQMHCNFS 433 (466)
Q Consensus 423 ~e~~~~~~~~s 433 (466)
.++|+.-..+.
T Consensus 450 ~~~y~kALe~~ 460 (472)
T 4g1t_A 450 DEDSERGLESG 460 (472)
T ss_dssp -----------
T ss_pred HHHHHHHHhcC
Confidence 99887655443
No 27
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.09 E-value=2.3e-07 Score=91.95 Aligned_cols=312 Identities=13% Similarity=0.054 Sum_probs=201.5
Q ss_pred HhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhc
Q psy9584 32 THTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHA 111 (466)
Q Consensus 32 ~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~ 111 (466)
....+.++|..++++++... |.. ..+..+++.++...|.+..+...++++++..... ...++.+|.++.
T Consensus 10 ~~~g~~~~A~~~~~~~~~~~---p~~----~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~----~~~~~~lg~~~~ 78 (388)
T 1w3b_A 10 YQAGDFEAAERHCMQLWRQE---PDN----TGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLL----AEAYSNLGNVYK 78 (388)
T ss_dssp HHHTCHHHHHHHHHHHHHHC---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhC---CCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc----hHHHHHHHHHHH
Confidence 44678999999999976652 322 2567899999999999999999999999876433 446678999999
Q ss_pred ccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHH
Q psy9584 112 GEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQ 191 (466)
Q Consensus 112 ~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~ 191 (466)
..|+++.|++.+++++... ......+..++.++..+. +.++....+.++-.+.+. ...++...-
T Consensus 79 ~~g~~~~A~~~~~~al~~~----p~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~p~---------~~~~~~~l~- 142 (388)
T 1w3b_A 79 ERGQLQEAIEHYRHALRLK----PDFIDGYINLAAALVAAG--DMEGAVQAYVSALQYNPD---------LYCVRSDLG- 142 (388)
T ss_dssp HHTCHHHHHHHHHHHHHHC----TTCHHHHHHHHHHHHHHS--CSSHHHHHHHHHHHHCTT---------CTHHHHHHH-
T ss_pred HCCCHHHHHHHHHHHHHcC----cchHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCC---------cHHHHHHHH-
Confidence 9999999999999988753 222344555555443332 223223333333222211 112222211
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhh-
Q psy9584 192 VCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGT- 270 (466)
Q Consensus 192 i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~- 270 (466)
..+...|+...+...+++.-. . .|+ ...++..+..+ |...|+...
T Consensus 143 -~~~~~~g~~~~A~~~~~~al~---~--~p~----------------------~~~~~~~l~~~------~~~~g~~~~A 188 (388)
T 1w3b_A 143 -NLLKALGRLEEAKACYLKAIE---T--QPN----------------------FAVAWSNLGCV------FNAQGEIWLA 188 (388)
T ss_dssp -HHHHTTSCHHHHHHHHHHHHH---H--CTT----------------------CHHHHHHHHHH------HHTTTCHHHH
T ss_pred -HHHHHccCHHHHHHHHHHHHH---h--CCC----------------------CHHHHHHHHHH------HHHcCCHHHH
Confidence 223456777777766654421 2 221 12334455555 666776644
Q ss_pred -----HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHH
Q psy9584 271 -----EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEA 342 (466)
Q Consensus 271 -----eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eA 342 (466)
+|++. +|+. .-+..++|.+|...++-. +.+...-.+.|... ... +.-|.....+|++++|
T Consensus 189 ~~~~~~al~~--~p~~-~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~--------~~l~~~~~~~g~~~~A 256 (388)
T 1w3b_A 189 IHHFEKAVTL--DPNF-LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA-VVH--------GNLACVYYEQGLIDLA 256 (388)
T ss_dssp HHHHHHHHHH--CTTC-HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCH-HHH--------HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhc--CCCc-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCH-HHH--------HHHHHHHHHcCCHHHH
Confidence 25444 2332 346789999999977332 34444445666421 111 1222333789999999
Q ss_pred HHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHH
Q psy9584 343 KRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRE 422 (466)
Q Consensus 343 k~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~ 422 (466)
.+++++++++.... ..++..+|.++...|++++|.+....++.+. |+. ..+...+..+|...|++++|
T Consensus 257 ~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---p~~---~~~~~~l~~~~~~~g~~~~A 324 (388)
T 1w3b_A 257 IDTYRRAIELQPHF------PDAYCNLANALKEKGSVAEAEDCYNTALRLC---PTH---ADSLNNLANIKREQGNIEEA 324 (388)
T ss_dssp HHHHHHHHHTCSSC------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC---TTC---HHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---ccc---HHHHHHHHHHHHHcCCHHHH
Confidence 99999999865432 2357889999999999999999999999874 332 22334678899999999999
Q ss_pred HHHHHH
Q psy9584 423 NEALQM 428 (466)
Q Consensus 423 ~e~~~~ 428 (466)
.+.++.
T Consensus 325 ~~~~~~ 330 (388)
T 1w3b_A 325 VRLYRK 330 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 28
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.09 E-value=4.6e-08 Score=92.29 Aligned_cols=266 Identities=12% Similarity=0.043 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch----hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHh-
Q psy9584 59 DVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH----SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANIS- 133 (466)
Q Consensus 59 d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~----~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~- 133 (466)
....++...+|.+|...|.+..+...++++++.... ........++.+|.++...|+++.|++.++.++.++.+.
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 103 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTL 103 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 356788999999999999999999999999998752 346677888899999999999999999999999998876
Q ss_pred -cChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHH
Q psy9584 134 -NAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQ 212 (466)
Q Consensus 134 -~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq 212 (466)
++. .....++...+.+... .|. +.+.+..|-.+++++ ++.
T Consensus 104 ~~~~--------------------~~~~~~~~~l~~~~~~-~g~--~~~A~~~~~~a~~~~---------------~~~- 144 (311)
T 3nf1_A 104 GKDH--------------------PAVAATLNNLAVLYGK-RGK--YKEAEPLCKRALEIR---------------EKV- 144 (311)
T ss_dssp CTTC--------------------HHHHHHHHHHHHHHHT-TTC--HHHHHHHHHHHHHHH---------------HHH-
T ss_pred CCCC--------------------hHHHHHHHHHHHHHHH-cCc--HHHHHHHHHHHHHHH---------------HHh-
Confidence 332 1123334444444444 344 566777776666655 111
Q ss_pred HHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHH
Q psy9584 213 QSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIV 292 (466)
Q Consensus 213 ~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~ 292 (466)
..+ ++.....+..++|.+
T Consensus 145 ------~~~--------------------------------------------------------~~~~~~~~~~~la~~ 162 (311)
T 3nf1_A 145 ------LGK--------------------------------------------------------DHPDVAKQLNNLALL 162 (311)
T ss_dssp ------HCT--------------------------------------------------------TCHHHHHHHHHHHHH
T ss_pred ------cCC--------------------------------------------------------CChHHHHHHHHHHHH
Confidence 111 234456678899999
Q ss_pred HHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhh---H-----
Q psy9584 293 YLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNR---L----- 361 (466)
Q Consensus 293 Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~---l----- 361 (466)
|...++.. ++++.+-.+............ +.+++.-|...+..|++++|.+++++++++....+... -
T Consensus 163 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 241 (311)
T 3nf1_A 163 CQNQGKYEEVEYYYQRALEIYQTKLGPDDPNV-AKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIW 241 (311)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHH-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHH
Confidence 99977433 233333222100000001111 22223344445789999999999999999876643211 1
Q ss_pred -HHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 362 -TSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 362 -~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
....+..++..+...+.+.++......+ ..+......+...+.++|...|++++|.++++.-..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l 307 (311)
T 3nf1_A 242 MHAEEREECKGKQKDGTSFGEYGGWYKAC------KVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHC-------CCSCCCC---------------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHhhc------CCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 1111222222333333333333332222 2233445566666777777777777777777655544
No 29
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.08 E-value=5.4e-08 Score=90.82 Aligned_cols=132 Identities=9% Similarity=0.071 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhCCCchHHHHHHhh---hCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhH
Q psy9584 285 ANLNLAIVYLRGKREGDFAALLER---INPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRL 361 (466)
Q Consensus 285 ~~lNlai~Yl~~~~~~e~~~~l~~---i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l 361 (466)
+..++|.+|...++-.+....+++ ++|.. ..+++.-|...+..+++++|.+++++++++....
T Consensus 110 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~----- 175 (272)
T 3u4t_A 110 MYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD---------PKVFYELGQAYYYNKEYVKADSSFVKVLELKPNI----- 175 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----
Confidence 455677777776643333333322 22211 1111223323355568888888888888866543
Q ss_pred HHhHHHHHHHHHHhcCC---hHHHHHhhHHHHHHhhcCCCh--hHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 362 TSCSLVLLGHIFLSLGN---HRESMNMVTPAMQLASKIPDV--HVQLWASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 362 ~~~~l~llg~i~l~~~~---~~ea~~~~~~a~~lAkK~~D~--~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
..++..+|.++...|+ +++|.+....++++..+.||. .....+...+..+|...||+++|.++++.-..
T Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 176 -YIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILA 249 (272)
T ss_dssp -HHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3466778888888888 888899999999998888884 33345667788888889999998887765543
No 30
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.07 E-value=1.2e-07 Score=98.85 Aligned_cols=133 Identities=11% Similarity=0.058 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhh-h
Q psy9584 284 FANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDL-N 359 (466)
Q Consensus 284 ~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l-~ 359 (466)
.+..++|.+|...|+-. ++++.+.++.|... ... +.-|......|++++|.+++++++++....+. .
T Consensus 442 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~--------~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p 512 (597)
T 2xpi_A 442 LPYLFLGMQHMQLGNILLANEYLQSSYALFQYDP-LLL--------NELGVVAFNKSDMQTAINHFQNALLLVKKTQSNE 512 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCH-HHH--------HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh-HHH--------HHHHHHHHHhCCHHHHHHHHHHHHHhhhccccch
Confidence 45677899999977433 35555555666421 111 22222236899999999999999998665322 2
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
.-...++..+|.++...|++++|.+....++.+. |+. ..+...|..+|...|++++|.++++.-..
T Consensus 513 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~---p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 513 KPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS---TND---ANVHTAIALVYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---SCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC---CCC---hHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 2235678899999999999999999999998875 432 35567788999999999999887765443
No 31
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.04 E-value=2.2e-07 Score=96.89 Aligned_cols=132 Identities=17% Similarity=0.061 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHhCCCchH---HHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhh
Q psy9584 284 FANLNLAIVYLRGKREGD---FAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNR 360 (466)
Q Consensus 284 ~~~lNlai~Yl~~~~~~e---~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~ 360 (466)
.+..++|.+|.+.|+..+ +++.+.++.|... .....+ +. .....|++++|.++++++++....
T Consensus 408 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~l-~~-------~~~~~g~~~~A~~~~~~~~~~~~~----- 473 (597)
T 2xpi_A 408 PAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTH-LPYLFL-GM-------QHMQLGNILLANEYLQSSYALFQY----- 473 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCS-HHHHHH-HH-------HHHHHTCHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch-HHHHHH-HH-------HHHHcCCHHHHHHHHHHHHHhCCC-----
Confidence 356688999999775433 4444445555321 111111 22 226789999999999999986443
Q ss_pred HHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhH-HHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 361 LTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHV-QLWASAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 361 l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~-qlw~~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
...++..+|.++.+.|++++|.+....++.+..+.+..+. ...+...+.++|...|++++|.+.++.-.
T Consensus 474 -~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 543 (597)
T 2xpi_A 474 -DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGL 543 (597)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 2346889999999999999999999999999876432221 13344567789999999999988776543
No 32
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.01 E-value=1.3e-07 Score=92.32 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=99.2
Q ss_pred cCCHHHHHHHHHHHHHHHhccccc-----hHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc--hhhhhHHHHHHHH
Q psy9584 34 TKNIDLARNHLEQAWHLSQSINAF-----DDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ--HSIYWHCRLIFQL 106 (466)
Q Consensus 34 T~N~~~A~~hLeka~~L~~~~~~~-----~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~--~~~~W~~~~~fqL 106 (466)
+.|.++|+.++++|....+.. .| .+.-...+.-.+.+|...|.+..+...+.+++++.. +.+......+.++
T Consensus 4 ~~~~~eA~~~~~~a~k~~~~~-~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~l 82 (307)
T 2ifu_A 4 AQKISEAHEHIAKAEKYLKTS-FMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQA 82 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCCC-SSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHcccc-ccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 457789999999988765531 11 133344566668888889989889999999888875 3445566777788
Q ss_pred HHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHH
Q psy9584 107 AQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVF 186 (466)
Q Consensus 107 A~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~ 186 (466)
+.++...||+..|++.+++++++..+.|++ .. ...++..++.++.. |. +.+.+..|
T Consensus 83 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~-------------------~~-~a~~~~~lg~~~~~--g~--~~~A~~~~ 138 (307)
T 2ifu_A 83 GMMLKDLQRMPEAVQYIEKASVMYVENGTP-------------------DT-AAMALDRAGKLMEP--LD--LSKAVHLY 138 (307)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHHTTTCH-------------------HH-HHHHHHHHHHHHTT--TC--HHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHcCCH-------------------HH-HHHHHHHHHHHHHc--CC--HHHHHHHH
Confidence 999888899999999999999988888877 22 34556666777655 55 67778888
Q ss_pred HHHHHHH
Q psy9584 187 FLVLQVC 193 (466)
Q Consensus 187 ~~~L~i~ 193 (466)
-+.+++.
T Consensus 139 ~~Al~~~ 145 (307)
T 2ifu_A 139 QQAAAVF 145 (307)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777655
No 33
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.01 E-value=1.3e-07 Score=89.94 Aligned_cols=265 Identities=11% Similarity=0.070 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHH
Q psy9584 22 THLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCR 101 (466)
Q Consensus 22 ~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~ 101 (466)
+.+.+|..++.. .+.++|..++++++..... . ..+...++.++...|.+..+...++++++.....+ .
T Consensus 24 ~~~~~a~~~~~~-g~~~~A~~~~~~~l~~~p~---~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~ 91 (330)
T 3hym_B 24 VVVSLAERHYYN-CDFKMCYKLTSVVMEKDPF---H----ASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNP----V 91 (330)
T ss_dssp THHHHHHHHHHT-TCHHHHHHHHHHHHHHCTT---C----TTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST----H
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHcCCC---C----hhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH----H
Confidence 456667765554 8899999999988654222 2 23555678888888988889999999888765442 3
Q ss_pred HHHHHHHHhcccc-cHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchH
Q psy9584 102 LIFQLAQIHAGEK-DYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQK 180 (466)
Q Consensus 102 ~~fqLA~i~~~~~-D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~ 180 (466)
.++.+|.++...| ++..|++.++.++..... + ..+++. .+.+... .|. +.
T Consensus 92 ~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~--~--~~~~~~----------------------l~~~~~~-~~~--~~ 142 (330)
T 3hym_B 92 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKT--Y--GPAWIA----------------------YGHSFAV-ESE--HD 142 (330)
T ss_dssp HHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTT--C--THHHHH----------------------HHHHHHH-HTC--HH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCc--c--HHHHHH----------------------HHHHHHH-ccC--HH
Confidence 4556788888888 899898888877654321 0 111111 1111111 122 23
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhh
Q psy9584 181 EYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLK 260 (466)
Q Consensus 181 e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk 260 (466)
+.+..|-.++++. |.
T Consensus 143 ~A~~~~~~a~~~~---------------------------~~-------------------------------------- 157 (330)
T 3hym_B 143 QAMAAYFTAAQLM---------------------------KG-------------------------------------- 157 (330)
T ss_dssp HHHHHHHHHHHHT---------------------------TT--------------------------------------
T ss_pred HHHHHHHHHHHhc---------------------------cc--------------------------------------
Confidence 3333333322211 11
Q ss_pred HHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhh
Q psy9584 261 FFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQA 337 (466)
Q Consensus 261 ~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~ 337 (466)
+ ..+..++|.+|...++.. ++++.+-++.|.. +.+.+.-|...+.+|
T Consensus 158 -----------------~----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 158 -----------------C----HLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED---------PFVMHEVGVVAFQNG 207 (330)
T ss_dssp -----------------C----SHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---------HHHHHHHHHHHHHTT
T ss_pred -----------------c----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC---------hHHHHHHHHHHHHcc
Confidence 0 122445788888866433 2444444444432 111233344446788
Q ss_pred cHHHHHHHHHHHHHhhhhhhhh---hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHH
Q psy9584 338 RYNEAKRYLRETLKMANAEDLN---RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYK 414 (466)
Q Consensus 338 ~~~eAk~~lre~lk~a~~~~l~---~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~ 414 (466)
++.+|..++++++++....+.. .-...++..+|.++...|++++|.+....++.+....+ ++...+..+|.
T Consensus 208 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~------~~~~~la~~~~ 281 (330)
T 3hym_B 208 EWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNA------STYSAIGYIHS 281 (330)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCS------HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccch------HHHHHHHHHHH
Confidence 8888888888888876554332 11234677888888888888888888888887754432 33455678888
Q ss_pred HcCCchHHHHHHHH
Q psy9584 415 ILNDPVRENEALQM 428 (466)
Q Consensus 415 ~~g~~~~~~e~~~~ 428 (466)
..|++++|.++++.
T Consensus 282 ~~g~~~~A~~~~~~ 295 (330)
T 3hym_B 282 LMGNFENAVDYFHT 295 (330)
T ss_dssp HHTCHHHHHHHHHT
T ss_pred HhccHHHHHHHHHH
Confidence 88888888776654
No 34
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.00 E-value=1.2e-07 Score=89.45 Aligned_cols=199 Identities=14% Similarity=0.147 Sum_probs=131.1
Q ss_pred hhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccc
Q psy9584 97 YWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGS 176 (466)
Q Consensus 97 ~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~ 176 (466)
......++.+|.++...||+..|++.++.+..++.+.+.+ +......++...+.+.-. .|.
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~------------------~~~~~~~~~~~la~~~~~-~g~ 84 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGH------------------DHPDVATMLNILALVYRD-QNK 84 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCS------------------SSHHHHHHHHHHHHHHHH-TTC
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCC------------------CCHHHHHHHHHHHHHHHH-CCC
Confidence 3456778889999999999999999999999999887621 011112333334444433 343
Q ss_pred cchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHh
Q psy9584 177 QYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVI 256 (466)
Q Consensus 177 ~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~ 256 (466)
+.+.+.+|-.+++++ ++. ..+
T Consensus 85 --~~~A~~~~~~al~~~---------------~~~-------~~~----------------------------------- 105 (311)
T 3nf1_A 85 --YKDAANLLNDALAIR---------------EKT-------LGK----------------------------------- 105 (311)
T ss_dssp --HHHHHHHHHHHHHHH---------------HHH-------HCT-----------------------------------
T ss_pred --HHHHHHHHHHHHHHH---------------HHH-------hCC-----------------------------------
Confidence 556666666666554 111 011
Q ss_pred hhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHH
Q psy9584 257 GHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQS 333 (466)
Q Consensus 257 ~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~ 333 (466)
++.....+..++|.+|...++.. ++++.+-++........... .+.+++.-|...
T Consensus 106 ---------------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~ 163 (311)
T 3nf1_A 106 ---------------------DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD-VAKQLNNLALLC 163 (311)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHH
T ss_pred ---------------------CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHH
Confidence 23445667889999999977433 23333322210000000111 133334455555
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhh--hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhc
Q psy9584 334 FFQARYNEAKRYLRETLKMANAE--DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASK 395 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~--~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK 395 (466)
+..|++.+|.+++++++++.... +.......++..+|.++...|++++|.+....++.++..
T Consensus 164 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 164 QNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999987765 445666778999999999999999999999999998755
No 35
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.00 E-value=1.4e-07 Score=89.58 Aligned_cols=285 Identities=13% Similarity=0.041 Sum_probs=187.3
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH 94 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~ 94 (466)
.|...+...+.+|..++ ...+.++|...+++++..... ...+...+|.+|...|.+..+...++++++....
T Consensus 16 ~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 87 (327)
T 3cv0_A 16 NPYMYHENPMEEGLSML-KLANLAEAALAFEAVCQAAPE-------REEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 87 (327)
T ss_dssp CGGGGSSCHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cchhhhHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcC
Confidence 46667777888887754 567899999999999775222 2456778999999999999999999999998754
Q ss_pred hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhc
Q psy9584 95 SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWT 174 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~ 174 (466)
. ...++.+|.++...|++..|++.++.+.............. .....+.
T Consensus 88 ~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~-- 136 (327)
T 3cv0_A 88 D----IAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVN-------------------------LQADVDI-- 136 (327)
T ss_dssp C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------------------------
T ss_pred C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHH-------------------------hHHHHHH--
Confidence 4 34556789999999999999999999876543222210000 0000000
Q ss_pred cccchHhhHHHHHHHHHHH-hhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHH
Q psy9584 175 GSQYQKEYLKVFFLVLQVC-HYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLV 253 (466)
Q Consensus 175 g~~~~~e~L~~~~~~L~i~-~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~ 253 (466)
... . .+... .+...|+...+...+++.- .. .|
T Consensus 137 ------~~~---~-~~~~~~~~~~~~~~~~A~~~~~~~~---~~--~~-------------------------------- 169 (327)
T 3cv0_A 137 ------DDL---N-VQSEDFFFAAPNEYRECRTLLHAAL---EM--NP-------------------------------- 169 (327)
T ss_dssp -------------------CCTTSHHHHHHHHHHHHHHH---HH--ST--------------------------------
T ss_pred ------HHH---H-HHHHhHHHHHcccHHHHHHHHHHHH---hh--CC--------------------------------
Confidence 000 0 01001 2344555555554443332 11 11
Q ss_pred HHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHh
Q psy9584 254 TVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQG 330 (466)
Q Consensus 254 tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~ 330 (466)
+ ...+..++|.+|...++.. ++++.+-++.|... .+.+..|
T Consensus 170 --------------------------~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------~~~~~l~ 213 (327)
T 3cv0_A 170 --------------------------N-DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDA---------QLWNKLG 213 (327)
T ss_dssp --------------------------T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------HHHHHHH
T ss_pred --------------------------C-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcH---------HHHHHHH
Confidence 1 1245678899999977433 34444444555321 1112333
Q ss_pred HHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhH------HHH
Q psy9584 331 LQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHV------QLW 404 (466)
Q Consensus 331 ~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~------qlw 404 (466)
...+..|++++|.++++++++..... ..++..+|.++...|++++|.+....++.+.....+..- ...
T Consensus 214 ~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 287 (327)
T 3cv0_A 214 ATLANGNRPQEALDAYNRALDINPGY------VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRS 287 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHH
Confidence 44477999999999999999976432 336778999999999999999999999999877444322 344
Q ss_pred HHHHHHHHHHHcCCchHHHHHHH
Q psy9584 405 ASAILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 405 ~~~lL~~ly~~~g~~~~~~e~~~ 427 (466)
+...+..+|...|+++.|.+.++
T Consensus 288 ~~~~l~~~~~~~g~~~~A~~~~~ 310 (327)
T 3cv0_A 288 MWDFFRMLLNVMNRPDLVELTYA 310 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHH
Confidence 55678899999999999977654
No 36
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.98 E-value=4e-07 Score=83.39 Aligned_cols=229 Identities=10% Similarity=0.012 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChH---
Q psy9584 61 KFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQY--- 137 (466)
Q Consensus 61 K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~--- 137 (466)
..++...+|.+|...|++..+...++++++.. .. ...++.+|.++...||++.|++.++.+++.....+...
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 78 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KD----ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVI 78 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CC----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-cc----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHH
Confidence 45678889999999999999999999999988 44 34567899999999999999999999999887664322
Q ss_pred HHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHH----hhhhhhhhhhhhHHHHHHHH
Q psy9584 138 TRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVC----HYLMAGQVKSVKPCLKQLQQ 213 (466)
Q Consensus 138 ~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~----~~l~~g~v~~~k~~lkqLq~ 213 (466)
..+++.++.+.. . .|. +.+.+..|-.++++. .+...|+...+...+++.
T Consensus 79 ~~~~~~l~~~~~----------------------~-~~~--~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~-- 131 (258)
T 3uq3_A 79 SKSFARIGNAYH----------------------K-LGD--LKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAE-- 131 (258)
T ss_dssp HHHHHHHHHHHH----------------------H-TTC--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHH----------------------H-ccc--HHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHH--
Confidence 233333333332 2 122 334444444444422 111122222222222111
Q ss_pred HHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHH
Q psy9584 214 SILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVY 293 (466)
Q Consensus 214 ~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Y 293 (466)
. + .++ ....+..++|.+|
T Consensus 132 -~----------------------------------------------------------~--~~~-~~~~~~~~~~~~~ 149 (258)
T 3uq3_A 132 -A----------------------------------------------------------Y--VNP-EKAEEARLEGKEY 149 (258)
T ss_dssp -H----------------------------------------------------------H--CCH-HHHHHHHHHHHHH
T ss_pred -H----------------------------------------------------------H--cCc-chHHHHHHHHHHH
Confidence 0 0 012 2335677889999
Q ss_pred HhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHH
Q psy9584 294 LRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLG 370 (466)
Q Consensus 294 l~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg 370 (466)
...++-. ++++.+-.+.|... .+++.-|...+..|++.+|.+++++++++.... ..++..+|
T Consensus 150 ~~~~~~~~A~~~~~~a~~~~~~~~---------~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l~ 214 (258)
T 3uq3_A 150 FTKSDWPNAVKAYTEMIKRAPEDA---------RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF------VRAYIRKA 214 (258)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCcccH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH------HHHHHHHH
Confidence 9977433 35555545555421 122233344478899999999999998865432 35677899
Q ss_pred HHHHhcCChHHHHHhhHHHHHHhhcCCC
Q psy9584 371 HIFLSLGNHRESMNMVTPAMQLASKIPD 398 (466)
Q Consensus 371 ~i~l~~~~~~ea~~~~~~a~~lAkK~~D 398 (466)
.++...|++++|.+....++++..+.++
T Consensus 215 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 242 (258)
T 3uq3_A 215 TAQIAVKEYASALETLDAARTKDAEVNN 242 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhHHHHHHHHHHHHHhChhhcC
Confidence 9999999999999999999998865443
No 37
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.97 E-value=5.7e-08 Score=81.87 Aligned_cols=124 Identities=15% Similarity=0.036 Sum_probs=109.0
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc-
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ- 93 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~- 93 (466)
.|...+.++..+|.+++ .+.+.++|..++++++.+.+..+ .......+...+|.+|...|.+..+...++++++...
T Consensus 4 d~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 4 SRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKEFG-DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 46788999999998754 57899999999999999988754 5677788999999999999999999999999999886
Q ss_pred -hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHH
Q psy9584 94 -HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRV 140 (466)
Q Consensus 94 -~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~ 140 (466)
+.+.+....++.+|.++...|+++.|++.++.+.+++.+.+++....
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 82 LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 45677788888999999999999999999999999999998874443
No 38
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.92 E-value=5.2e-08 Score=86.85 Aligned_cols=158 Identities=15% Similarity=0.053 Sum_probs=124.1
Q ss_pred hcchhhHHHHHHHHHHHHHhCCCch---HHH-HHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHH
Q psy9584 276 SQERELWTFANLNLAIVYLRGKREG---DFA-ALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLK 351 (466)
Q Consensus 276 ~~~~~~~~~~~lNlai~Yl~~~~~~---e~~-~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk 351 (466)
..++.....+..++|.+|...++.. +++ +.++.....+. ....+.+++.-|......|++.+|.++++++++
T Consensus 19 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 94 (203)
T 3gw4_A 19 LAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD----HTAEHRALHQVGMVERMAGNWDAARRCFLEERE 94 (203)
T ss_dssp HTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC----cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4466677889999999999987432 233 32221111111 111233444456666899999999999999999
Q ss_pred hhhhhh-hhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 352 MANAED-LNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 352 ~a~~~~-l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
++...+ .....+.++..+|.++...|++++|......++.++++.+|.....++...+..+|...|++++|.++++.-.
T Consensus 95 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 95 LLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRAR 174 (203)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 999887 4557888999999999999999999999999999999999999888889999999999999999999888777
Q ss_pred HHHHHHH
Q psy9584 431 NFSQMLL 437 (466)
Q Consensus 431 ~~s~~l~ 437 (466)
.+.+..-
T Consensus 175 ~~~~~~~ 181 (203)
T 3gw4_A 175 DIFAELE 181 (203)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 7766653
No 39
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.89 E-value=3.6e-07 Score=84.48 Aligned_cols=250 Identities=13% Similarity=0.026 Sum_probs=165.3
Q ss_pred HhCCccchhHHHHHHHHhhch----hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHh--cChHHHHHHHHHHH
Q psy9584 74 TQLLSNLSKPILRRAIELSQH----SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANIS--NAQYTRVLFLLSRC 147 (466)
Q Consensus 74 ~~~~~~~ak~~l~k~i~~s~~----~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~--~d~~~~~lf~ls~~ 147 (466)
..|.+..|...++++++.... ........++.+|.++...|+++.|++.++.+++++.+. ++.
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~----------- 81 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDH----------- 81 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC-----------
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcc-----------
Confidence 356788899999999998852 335678888999999999999999999999999999876 332
Q ss_pred HHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCC
Q psy9584 148 MLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDE 227 (466)
Q Consensus 148 ~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~ 227 (466)
.....++...+.++-. .|. +.+.+..|-.+++++ ++. ..+
T Consensus 82 ---------~~~~~~~~~l~~~~~~-~g~--~~~A~~~~~~al~~~---------------~~~-------~~~------ 121 (283)
T 3edt_B 82 ---------PAVAATLNNLAVLYGK-RGK--YKEAEPLCKRALEIR---------------EKV-------LGK------ 121 (283)
T ss_dssp ---------HHHHHHHHHHHHHHHT-TTC--HHHHHHHHHHHHHHH---------------HHH-------HCT------
T ss_pred ---------hHHHHHHHHHHHHHHH-hcc--HHHHHHHHHHHHHHH---------------HHH-------cCC------
Confidence 1233455555555555 455 677888888777766 222 121
Q ss_pred ccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHH
Q psy9584 228 VVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAA 304 (466)
Q Consensus 228 ~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~ 304 (466)
+......+..|+|.+|...++-. ++++
T Consensus 122 --------------------------------------------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 151 (283)
T 3edt_B 122 --------------------------------------------------FHPDVAKQLNNLALLCQNQGKAEEVEYYYR 151 (283)
T ss_dssp --------------------------------------------------TCHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred --------------------------------------------------CChHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 12334567899999999977432 2333
Q ss_pred HHhhh----CCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhh---hhHHHhHHHHHHHHHHhcC
Q psy9584 305 LLERI----NPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDL---NRLTSCSLVLLGHIFLSLG 377 (466)
Q Consensus 305 ~l~~i----~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l---~~l~~~~l~llg~i~l~~~ 377 (466)
.+-.+ .++.- .. .+.+++.-|...+.+|++++|.+++++++++...... .......+..++..+...+
T Consensus 152 ~al~~~~~~~~~~~----~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T 3edt_B 152 RALEIYATRLGPDD----PN-VAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKD 226 (283)
T ss_dssp HHHHHHHHHSCTTC----HH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCC----HH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCC
Confidence 33222 11111 11 1223334455558899999999999999998776542 3445556777888887777
Q ss_pred ChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q psy9584 378 NHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMH 429 (466)
Q Consensus 378 ~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~ 429 (466)
....+............-.++......+...|.++|...|++++|.++++.-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 278 (283)
T 3edt_B 227 KRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCA 278 (283)
T ss_dssp CCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 7777666555554444555566677788889999999999999998877654
No 40
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.88 E-value=2.1e-07 Score=82.85 Aligned_cols=156 Identities=13% Similarity=0.045 Sum_probs=121.4
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc-
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ- 93 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~- 93 (466)
.|...+.++..+|.+++ ...+.++|..++++++.+++..+ -......+...+|.+|...|+++.+...++++++..+
T Consensus 21 ~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 98 (203)
T 3gw4_A 21 HPATASGARFMLGYVYA-FMDRFDEARASFQALQQQAQKSG-DHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLAS 98 (203)
T ss_dssp STTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34567889999998754 57899999999999999988865 6677888999999999999999999999999999976
Q ss_pred -h-hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhh
Q psy9584 94 -H-SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVE 171 (466)
Q Consensus 94 -~-~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~ 171 (466)
+ .+......++.+|.++...||++.|++.++.+.+++...+++..........+.++....+.++....+.++-.+.+
T Consensus 99 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 99 LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 2 44467788889999999999999999999999999999999866555444444443333333333344444444444
Q ss_pred h
Q psy9584 172 N 172 (466)
Q Consensus 172 ~ 172 (466)
.
T Consensus 179 ~ 179 (203)
T 3gw4_A 179 E 179 (203)
T ss_dssp H
T ss_pred H
Confidence 4
No 41
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.87 E-value=2.5e-07 Score=87.95 Aligned_cols=277 Identities=14% Similarity=0.077 Sum_probs=171.9
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhC-Cccc
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQL-LSNL 80 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~-~~~~ 80 (466)
|+.+++.+++..|.. ..+...++.++ ....+.++|...+++++..... . ..+...+|.+|...| .+..
T Consensus 41 A~~~~~~~l~~~p~~---~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~---~----~~~~~~l~~~~~~~~~~~~~ 109 (330)
T 3hym_B 41 CYKLTSVVMEKDPFH---ASCLPVHIGTL-VELNKANELFYLSHKLVDLYPS---N----PVSWFAVGCYYLMVGHKNEH 109 (330)
T ss_dssp HHHHHHHHHHHCTTC---TTTHHHHHHHH-HHHTCHHHHHHHHHHHHHHCTT---S----THHHHHHHHHHHHSCSCHHH
T ss_pred HHHHHHHHHHcCCCC---hhhHHHHHHHH-HHhhhHHHHHHHHHHHHHhCcC---C----HHHHHHHHHHHHHhhhhHHH
Confidence 667777777655421 12333455554 5667899999999999775322 2 357889999999999 8898
Q ss_pred hhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHH
Q psy9584 81 SKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAV 160 (466)
Q Consensus 81 ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~ 160 (466)
+...++++++.....+ ..++.+|.++...|++..|++.++.+.......... .
T Consensus 110 A~~~~~~a~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~----~------------------- 162 (330)
T 3hym_B 110 ARRYLSKATTLEKTYG----PAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLP----M------------------- 162 (330)
T ss_dssp HHHHHHHHHTTCTTCT----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHH----H-------------------
T ss_pred HHHHHHHHHHhCCccH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHH----H-------------------
Confidence 9999999998875442 335678999999999999999999887764311100 0
Q ss_pred HHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCccccc
Q psy9584 161 QLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIW 240 (466)
Q Consensus 161 ~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~W 240 (466)
...+ ..+...|+...+...+++. .+. .|
T Consensus 163 ---~~l~-------------------------~~~~~~~~~~~A~~~~~~a---l~~--~~------------------- 190 (330)
T 3hym_B 163 ---LYIG-------------------------LEYGLTNNSKLAERFFSQA---LSI--AP------------------- 190 (330)
T ss_dssp ---HHHH-------------------------HHHHHTTCHHHHHHHHHHH---HTT--CT-------------------
T ss_pred ---HHHH-------------------------HHHHHHhhHHHHHHHHHHH---HHh--CC-------------------
Confidence 0011 1122233333333333222 111 11
Q ss_pred CcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCC-cccc
Q psy9584 241 MPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPE-TLTS 316 (466)
Q Consensus 241 Lpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~-~~~~ 316 (466)
+. ..+..++|.+|...++-. ++++.+-++.+. .-..
T Consensus 191 ---------------------------------------~~-~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 230 (330)
T 3hym_B 191 ---------------------------------------ED-PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEV 230 (330)
T ss_dssp ---------------------------------------TC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSC
T ss_pred ---------------------------------------CC-hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccc
Confidence 11 245678899999977433 233333333322 1110
Q ss_pred ccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC
Q psy9584 317 HSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKI 396 (466)
Q Consensus 317 ~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~ 396 (466)
..... +.+++.-|......|++.+|.+++++++++... ...++..+|.++...|++++|.+....++.+.
T Consensus 231 ~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--- 300 (330)
T 3hym_B 231 TVDKW-EPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ------NASTYSAIGYIHSLMGNFENAVDYFHTALGLR--- 300 (330)
T ss_dssp TTTTC-CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTC---
T ss_pred cccHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc------chHHHHHHHHHHHHhccHHHHHHHHHHHHccC---
Confidence 00000 112233344447899999999999999997644 24467789999999999999999999888764
Q ss_pred CChhHHHHHHHHHHHHH-HHcCCchH
Q psy9584 397 PDVHVQLWASAILKDLY-KILNDPVR 421 (466)
Q Consensus 397 ~D~~~qlw~~~lL~~ly-~~~g~~~~ 421 (466)
|+. ..+...|...| +..|+.+.
T Consensus 301 p~~---~~~~~~l~~~~~~~~g~~~a 323 (330)
T 3hym_B 301 RDD---TFSVTMLGHCIEMYIGDSEA 323 (330)
T ss_dssp SCC---HHHHHHHHHHHHTTTTC---
T ss_pred CCc---hHHHHHHHHHHHHHhCchhc
Confidence 332 34455566666 56666543
No 42
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.83 E-value=9.1e-08 Score=93.11 Aligned_cols=276 Identities=11% Similarity=0.032 Sum_probs=164.4
Q ss_pred HHhcCCHHHHHH-HHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHH
Q psy9584 31 LTHTKNIDLARN-HLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQI 109 (466)
Q Consensus 31 ~~~T~N~~~A~~-hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i 109 (466)
+.+..+.+.|.. ++++++.+... .......+...+|.+|...|.+..+...++++++..... ...++.+|.+
T Consensus 35 ~~~~~~~~~a~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~l~~~ 107 (368)
T 1fch_A 35 HPWLSDYDDLTSATYDKGYQFEEE---NPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH----MEAWQYLGTT 107 (368)
T ss_dssp -----------CHHHHCCCCCCSS---CTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC----HHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhHHHhcCCC---CcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHH
Confidence 345678888888 88888755332 333345667789999999999999999999999887544 3456688999
Q ss_pred hcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHH
Q psy9584 110 HAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLV 189 (466)
Q Consensus 110 ~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~ 189 (466)
+...|++..|++.++.+++... ++ ..++ ...+.+... .|. +.+.+..|-.+
T Consensus 108 ~~~~g~~~~A~~~~~~al~~~~--~~--~~~~----------------------~~l~~~~~~-~g~--~~~A~~~~~~~ 158 (368)
T 1fch_A 108 QAENEQELLAISALRRCLELKP--DN--QTAL----------------------MALAVSFTN-ESL--QRQACEILRDW 158 (368)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT--TC--HHHH----------------------HHHHHHHHH-TTC--HHHHHHHHHHH
T ss_pred HHHCcCHHHHHHHHHHHHhcCC--CC--HHHH----------------------HHHHHHHHH-cCC--HHHHHHHHHHH
Confidence 9999999999999998877632 11 1122 222222222 232 34445544443
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchh
Q psy9584 190 LQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAG 269 (466)
Q Consensus 190 L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~ 269 (466)
+++. |. +... ...++.. ..
T Consensus 159 ~~~~---------------------------~~---~~~~--------~~~~~~~---------~~-------------- 177 (368)
T 1fch_A 159 LRYT---------------------------PA---YAHL--------VTPAEEG---------AG-------------- 177 (368)
T ss_dssp HHTS---------------------------TT---TGGG--------CC------------------------------
T ss_pred HHhC---------------------------cC---cHHH--------HHHHHHH---------hh--------------
Confidence 3322 10 0000 0000000 00
Q ss_pred hHHhhhhcchhhHHHHHHHHHHHHHhCCC--ch-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHH
Q psy9584 270 TEVERLSQERELWTFANLNLAIVYLRGKR--EG-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYL 346 (466)
Q Consensus 270 ~eAl~~~~~~~~~~~~~lNlai~Yl~~~~--~~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~l 346 (466)
.........+++.+| ..++ ++ ++++.+-++.|.... +.+++.-|...+..|++.+|.+++
T Consensus 178 ---------~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~-------~~~~~~l~~~~~~~g~~~~A~~~~ 240 (368)
T 1fch_A 178 ---------GAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRLDPTSID-------PDVQCGLGVLFNLSGEYDKAVDCF 240 (368)
T ss_dssp -----------------CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSCC-------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ---------hhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHhCcCccc-------HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 000001112455555 3332 22 355555556664211 122233344447899999999999
Q ss_pred HHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHH
Q psy9584 347 RETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEAL 426 (466)
Q Consensus 347 re~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~ 426 (466)
++++++.... ..++..+|.++...|++++|.+....++.+. |+. ..+...+..+|...|++++|.+++
T Consensus 241 ~~al~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---~~~---~~~~~~l~~~~~~~g~~~~A~~~~ 308 (368)
T 1fch_A 241 TAALSVRPND------YLLWNKLGATLANGNQSEEAVAAYRRALELQ---PGY---IRSRYNLGISCINLGAHREAVEHF 308 (368)
T ss_dssp HHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC---HHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHhCcCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCc---HHHHHHHHHHHHHCCCHHHHHHHH
Confidence 9999975432 3478899999999999999999999999874 332 355677889999999999999887
Q ss_pred HHHHHH
Q psy9584 427 QMHCNF 432 (466)
Q Consensus 427 ~~~~~~ 432 (466)
+.-...
T Consensus 309 ~~al~~ 314 (368)
T 1fch_A 309 LEALNM 314 (368)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 765544
No 43
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.83 E-value=2.2e-06 Score=86.74 Aligned_cols=317 Identities=12% Similarity=-0.023 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch-----hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHh
Q psy9584 59 DVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH-----SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANIS 133 (466)
Q Consensus 59 d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~-----~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~ 133 (466)
+.+..++.+||.+|+..|.+..|...+++++++.+. ........+.++|.+|...|++..|++.++++.++....
T Consensus 48 ~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~ 127 (472)
T 4g1t_A 48 EFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKF 127 (472)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhc
Confidence 456778999999999999999999999999998751 112334456689999999999999999999999998876
Q ss_pred cCh----HHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhh-hhhhhhhhhHHH
Q psy9584 134 NAQ----YTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYL-MAGQVKSVKPCL 208 (466)
Q Consensus 134 ~d~----~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l-~~g~v~~~k~~l 208 (466)
.++ ...++.....+++.+...+.++....+.++-++.+. . .+. +.-...+...+ ..|+...+ +
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~---~---~~~---~~~~~~~~~~l~~~~~~~~a---l 195 (472)
T 4g1t_A 128 SSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK---N---PEF---TSGLAIASYRLDNWPPSQNA---I 195 (472)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT---C---HHH---HHHHHHHHHHHHHSCCCCCT---H
T ss_pred ccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC---C---HHH---HHHHHHHHHHhcCchHHHHH---H
Confidence 543 234444444444433332223222333333333221 1 111 11111111111 12222222 3
Q ss_pred HHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhh---H-------Hhhhhcc
Q psy9584 209 KQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGT---E-------VERLSQE 278 (466)
Q Consensus 209 kqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~---e-------Al~~~~~ 278 (466)
+.+++.++. .|. ...+.+.+... +..+|.... + |+...
T Consensus 196 ~~~~~al~l--~p~----------------------~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~~al~~~-- 243 (472)
T 4g1t_A 196 DPLRQAIRL--NPD----------------------NQYLKVLLALK------LHKMREEGEEEGEGEKLVEEALEKA-- 243 (472)
T ss_dssp HHHHHHHHH--CSS----------------------CHHHHHHHHHH------HHHCC------CHHHHHHHHHHHHC--
T ss_pred HHHHHHhhc--CCc----------------------chHHHHHHHHH------HHHHHhhhhHHHHHHHHHHHHHHhC--
Confidence 333333333 221 12233334333 222222211 2 33321
Q ss_pred hhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhH------------HHhhhhcHHHHH
Q psy9584 279 RELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGL------------QSFFQARYNEAK 343 (466)
Q Consensus 279 ~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~------------~~~~~~~~~eAk 343 (466)
+ ....+..|+|.+|...++.. ++++.+-++.|... .....+ |.++.-.+. .....+.+.+|.
T Consensus 244 ~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~l-g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 320 (472)
T 4g1t_A 244 P-GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNA-YLHCQI-GCCYRAKVFQVMNLRENGMYGKRKLLELIGHAV 320 (472)
T ss_dssp S-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-HHHHHH-HHHHHHHHHHHHHC------CHHHHHHHHHHHH
T ss_pred c-cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChH-HHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHH
Confidence 2 22345679999999977432 46666666777522 122223 433221111 112234566778
Q ss_pred HHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHH
Q psy9584 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVREN 423 (466)
Q Consensus 344 ~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~ 423 (466)
.++++++++.... ..++..+|.++...|++++|++....++.+.. ++...+.+...+-.-.+...|++++|.
T Consensus 321 ~~~~~a~~~~~~~------~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ai 392 (472)
T 4g1t_A 321 AHLKKADEANDNL------FRVCSILASLHALADQYEEAEYYFQKEFSKEL--TPVAKQLLHLRYGNFQLYQMKCEDKAI 392 (472)
T ss_dssp HHHHHHHHHCTTT------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCC--CHHHHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred HHHHHHhhcCCch------hhhhhhHHHHHHHhccHHHHHHHHHHHHhcCC--CChHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 8887777654332 34567899999999999999999999987543 232222222222212344678999998
Q ss_pred HHHHHHH
Q psy9584 424 EALQMHC 430 (466)
Q Consensus 424 e~~~~~~ 430 (466)
+.|+.-.
T Consensus 393 ~~y~kal 399 (472)
T 4g1t_A 393 HHFIEGV 399 (472)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776543
No 44
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.82 E-value=7.4e-07 Score=87.28 Aligned_cols=244 Identities=11% Similarity=-0.004 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHH
Q psy9584 61 KFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRV 140 (466)
Q Consensus 61 K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~ 140 (466)
.......+|.+|...|.+..+...++++++..... ...++.+|.++...|++..|++.++.+++... .
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p----~---- 131 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD----AEAWQFLGITQAENENEQAAIVALQRCLELQP----N---- 131 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----T----
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC----C----
Confidence 34567889999999999999999999999987544 34567889999999999999999999877522 1
Q ss_pred HHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcC
Q psy9584 141 LFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQ 220 (466)
Q Consensus 141 lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~ 220 (466)
. ..++...+.++.. .|. +.+.+.+|-.++++. .. . ..
T Consensus 132 ----------------~--~~~~~~l~~~~~~-~g~--~~~A~~~~~~al~~~---------------p~------~-~~ 168 (365)
T 4eqf_A 132 ----------------N--LKALMALAVSYTN-TSH--QQDACEALKNWIKQN---------------PK------Y-KY 168 (365)
T ss_dssp ----------------C--HHHHHHHHHHHHH-TTC--HHHHHHHHHHHHHHC---------------HH------H-HC
T ss_pred ----------------C--HHHHHHHHHHHHc-ccc--HHHHHHHHHHHHHhC---------------cc------c-hH
Confidence 1 1222333333333 343 555666666655433 00 0 00
Q ss_pred CCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCc-
Q psy9584 221 PTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKRE- 299 (466)
Q Consensus 221 ~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~- 299 (466)
. + ........+..++|.+|...++.
T Consensus 169 ~---------------------------~---------------------------~~~~~~~~~~~~l~~~~~~~g~~~ 194 (365)
T 4eqf_A 169 L---------------------------V---------------------------KNKKGSPGLTRRMSKSPVDSSVLE 194 (365)
T ss_dssp C-------------------------------------------------------------------------CCHHHH
T ss_pred H---------------------------H---------------------------hhhccchHHHHHHHHHHhhhhhHH
Confidence 0 0 00112234566788888887732
Q ss_pred -h-HHHHHHhhhCCCc-cccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhc
Q psy9584 300 -G-DFAALLERINPET-LTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSL 376 (466)
Q Consensus 300 -~-e~~~~l~~i~~~~-~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~ 376 (466)
+ ++++.+-++.|.. .+.. ++.-|.....+|++.+|.+++++++++.... ..++..+|.++...
T Consensus 195 ~A~~~~~~al~~~p~~~~~~~--------~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 195 GVKELYLEAAHQNGDMIDPDL--------QTGLGVLFHLSGEFNRAIDAFNAALTVRPED------YSLWNRLGATLANG 260 (365)
T ss_dssp HHHHHHHHHHHHSCSSCCHHH--------HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCcCccCHHH--------HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHc
Confidence 2 3555555666652 2221 2223333478999999999999999976543 44788999999999
Q ss_pred CChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q psy9584 377 GNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFS 433 (466)
Q Consensus 377 ~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s 433 (466)
|++++|......++.+. |+. ..+...+..+|...|++++|.+.++.-....
T Consensus 261 g~~~~A~~~~~~al~~~---p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 311 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQ---PGF---IRSRYNLGISCINLGAYREAVSNFLTALSLQ 311 (365)
T ss_dssp TCHHHHHHHHHHHHHHC---TTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---CCc---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 99999999999999874 332 3455678899999999999998887766554
No 45
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.79 E-value=1.7e-06 Score=83.75 Aligned_cols=104 Identities=11% Similarity=-0.011 Sum_probs=84.5
Q ss_pred HHHHHHHhCCccchhHHHHHHHHhhc--hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHH
Q psy9584 68 LAELYETQLLSNLSKPILRRAIELSQ--HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLS 145 (466)
Q Consensus 68 La~~y~~~~~~~~ak~~l~k~i~~s~--~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls 145 (466)
.+.+|...|.++.|...+++++++.. +.+......+.++|.++...||++.|++.+++++++..+.|++
T Consensus 43 a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~--------- 113 (292)
T 1qqe_A 43 AATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF--------- 113 (292)
T ss_dssp HHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH---------
Confidence 37788999999999999999999975 4556667788899999999999999999999999999988887
Q ss_pred HHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHH
Q psy9584 146 RCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVC 193 (466)
Q Consensus 146 ~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~ 193 (466)
.. ...++..++.++....|. +.+.+..|-..+++.
T Consensus 114 ----------~~-~a~~~~~lg~~~~~~lg~--~~~A~~~~~~Al~~~ 148 (292)
T 1qqe_A 114 ----------RR-GANFKFELGEILENDLHD--YAKAIDCYELAGEWY 148 (292)
T ss_dssp ----------HH-HHHHHHHHHHHHHHTTCC--HHHHHHHHHHHHHHH
T ss_pred ----------HH-HHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHH
Confidence 22 345566777777762165 778888888877765
No 46
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.70 E-value=2.8e-06 Score=80.49 Aligned_cols=262 Identities=13% Similarity=0.069 Sum_probs=163.3
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.+++..+. .+.++..+|.++ ....+.++|..++++++.+... . ..+...+|.+|...|.+..+
T Consensus 40 A~~~~~~~~~~~~~---~~~~~~~l~~~~-~~~~~~~~A~~~~~~a~~~~~~---~----~~~~~~la~~~~~~~~~~~A 108 (327)
T 3cv0_A 40 AALAFEAVCQAAPE---REEAWRSLGLTQ-AENEKDGLAIIALNHARMLDPK---D----IAVHAALAVSHTNEHNANAA 108 (327)
T ss_dssp HHHHHHHHHHHCTT---CHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhCCC---CHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhcCcC---C----HHHHHHHHHHHHHcCCHHHH
Confidence 56777777765442 235566777764 4678999999999999876322 2 45788999999999999999
Q ss_pred hHHHHHHHHhhchhhhhHHHHHH---------HH-HH-HhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy9584 82 KPILRRAIELSQHSIYWHCRLIF---------QL-AQ-IHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLL 150 (466)
Q Consensus 82 k~~l~k~i~~s~~~~~W~~~~~f---------qL-A~-i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~l 150 (466)
...++++++.............. .+ +. ++...|++..|++.++.+.+.... ++ .++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~--~~~--------- 175 (327)
T 3cv0_A 109 LASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPN--DA--QLH--------- 175 (327)
T ss_dssp HHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTT--CH--HHH---------
T ss_pred HHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCC--CH--HHH---------
Confidence 99999999887633222111111 12 44 577888899898888887654321 11 111
Q ss_pred hcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccC
Q psy9584 151 LIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVS 230 (466)
Q Consensus 151 l~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~ 230 (466)
...+.+... .|. +.+.++.|-.+++ . .|.
T Consensus 176 -------------~~la~~~~~-~~~--~~~A~~~~~~~~~-------------------------~--~~~-------- 204 (327)
T 3cv0_A 176 -------------ASLGVLYNL-SNN--YDSAAANLRRAVE-------------------------L--RPD-------- 204 (327)
T ss_dssp -------------HHHHHHHHH-TTC--HHHHHHHHHHHHH-------------------------H--CTT--------
T ss_pred -------------HHHHHHHHH-hcc--HHHHHHHHHHHHH-------------------------h--CCC--------
Confidence 111111111 122 2333333333222 1 221
Q ss_pred CCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHh
Q psy9584 231 GPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLE 307 (466)
Q Consensus 231 ~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~ 307 (466)
+ ..+..++|.+|...++.. ++++.+-
T Consensus 205 -----------------------------------------------~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 233 (327)
T 3cv0_A 205 -----------------------------------------------D----AQLWNKLGATLANGNRPQEALDAYNRAL 233 (327)
T ss_dssp -----------------------------------------------C----HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----------------------------------------------c----HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 1 235678899999977433 3444444
Q ss_pred hhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhh------HHHhHHHHHHHHHHhcCChHH
Q psy9584 308 RINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNR------LTSCSLVLLGHIFLSLGNHRE 381 (466)
Q Consensus 308 ~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~------l~~~~l~llg~i~l~~~~~~e 381 (466)
++.|... . +.+.-|...+..|++.+|.+++++++++........ ....++..+|.++...|++++
T Consensus 234 ~~~~~~~-~--------~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 304 (327)
T 3cv0_A 234 DINPGYV-R--------VMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDL 304 (327)
T ss_dssp HHCTTCH-H--------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCH-H--------HHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHH
Confidence 4555321 1 112233334789999999999999999877632222 256678899999999999999
Q ss_pred HHHhhHHHHHHhhcCCC
Q psy9584 382 SMNMVTPAMQLASKIPD 398 (466)
Q Consensus 382 a~~~~~~a~~lAkK~~D 398 (466)
|......++....+..+
T Consensus 305 A~~~~~~~l~~~~~~~~ 321 (327)
T 3cv0_A 305 VELTYAQNVEPFAKEFG 321 (327)
T ss_dssp HHHHTTCCSHHHHHHTT
T ss_pred HHHHHHHHHHhcchhhh
Confidence 99999888877766554
No 47
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.61 E-value=3.4e-06 Score=78.43 Aligned_cols=241 Identities=9% Similarity=-0.016 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHH
Q psy9584 21 RTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHC 100 (466)
Q Consensus 21 ~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~ 100 (466)
.+.+++|..+ ....+.++|..++++++.+... .. .+...+|.+|...|.+..+...++++++.. ..+.+..
T Consensus 4 ~~~~~~a~~~-~~~~~~~~A~~~~~~~l~~~p~---~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~ 74 (272)
T 3u4t_A 4 DVEFRYADFL-FKNNNYAEAIEVFNKLEAKKYN---SP----YIYNRRAVCYYELAKYDLAQKDIETYFSKV-NATKAKS 74 (272)
T ss_dssp -CHHHHHHHH-HTTTCHHHHHHHHHHHHHTTCC---CS----TTHHHHHHHHHHTTCHHHHHHHHHHHHTTS-CTTTCCH
T ss_pred HHHHHHHHHH-HHhcCHHHHHHHHHHHHHhCCC---cH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-CchhHHH
Confidence 4567778765 4578899999999999876332 22 367889999999999999999999999944 4555566
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchH
Q psy9584 101 RLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQK 180 (466)
Q Consensus 101 ~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~ 180 (466)
..++.+|.++...|+++.|++.++++++.... + ..++..++.+...+. . +.
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~--~--~~~~~~l~~~~~~~~-----------------------~--~~ 125 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT--R--LDMYGQIGSYFYNKG-----------------------N--FP 125 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--C--THHHHHHHHHHHHTT-----------------------C--HH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc--c--HHHHHHHHHHHHHcc-----------------------C--HH
Confidence 77788999999999999999999999986543 2 245666666553221 1 22
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhh
Q psy9584 181 EYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLK 260 (466)
Q Consensus 181 e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk 260 (466)
+++..|-.++++ .|.
T Consensus 126 ~A~~~~~~al~~---------------------------~~~-------------------------------------- 140 (272)
T 3u4t_A 126 LAIQYMEKQIRP---------------------------TTT-------------------------------------- 140 (272)
T ss_dssp HHHHHHGGGCCS---------------------------SCC--------------------------------------
T ss_pred HHHHHHHHHhhc---------------------------CCC--------------------------------------
Confidence 333333332211 110
Q ss_pred HHHhcCchhhHHhhhhcchhhHHHHHHHHH-HHHHhCCC-ch-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhh
Q psy9584 261 FFGVTGTAGTEVERLSQERELWTFANLNLA-IVYLRGKR-EG-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQA 337 (466)
Q Consensus 261 ~Flv~G~~~~eAl~~~~~~~~~~~~~lNla-i~Yl~~~~-~~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~ 337 (466)
+ ..+..|+| .+|..+.. ++ ++++.+-++.|... . +++..|...+..+
T Consensus 141 -----------------~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~-~--------~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 141 -----------------D----PKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIY-I--------GYLWRARANAAQD 190 (272)
T ss_dssp -----------------C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-H--------HHHHHHHHHHHHS
T ss_pred -----------------c----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccch-H--------HHHHHHHHHHHcC
Confidence 0 12334556 55555431 22 23444444455321 0 1111222223445
Q ss_pred c---HHHHHHHHHHHHHhhhhhhh--hhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhh
Q psy9584 338 R---YNEAKRYLRETLKMANAEDL--NRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLAS 394 (466)
Q Consensus 338 ~---~~eAk~~lre~lk~a~~~~l--~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAk 394 (466)
+ +.+|..++++++++...... ......++..+|.+|...|++++|.+....++.+.-
T Consensus 191 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p 252 (272)
T 3u4t_A 191 PDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDP 252 (272)
T ss_dssp TTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc
Confidence 5 77888899999988755544 455667888999999999999999999999998753
No 48
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.61 E-value=6.7e-07 Score=86.28 Aligned_cols=134 Identities=13% Similarity=0.077 Sum_probs=116.7
Q ss_pred cchhHHHhhcC--C-CChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCc
Q psy9584 2 CIQCLQAVFNF--K-PPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLS 78 (466)
Q Consensus 2 ai~CLeAvl~~--~-~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~ 78 (466)
|+.+++-+++. . ..+..++.+...+|.++ ....+.+.|..++++|+.+.+..+........+++.+|.+|...|.+
T Consensus 134 Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y-~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y 212 (293)
T 3u3w_A 134 CILELKKLLNQQLTGIDVYQNLYIENAIANIY-AENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY 212 (293)
T ss_dssp HHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhcccccHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHH
Confidence 67888777752 2 24557888999999885 45778999999999999988887667788899999999999999999
Q ss_pred cchhHHHHHHHHhhc--hhhhhHHHHHHHHHHHhcccc-cHHHHHHHHHhHHHHHHHhcCh
Q psy9584 79 NLSKPILRRAIELSQ--HSIYWHCRLIFQLAQIHAGEK-DYELASSLLGVGVDYANISNAQ 136 (466)
Q Consensus 79 ~~ak~~l~k~i~~s~--~~~~W~~~~~fqLA~i~~~~~-D~~~A~~~L~~g~~~A~~~~d~ 136 (466)
..|...+.+++++.. +.......+++.+|.++...| +++.|++.++++..++...|++
T Consensus 213 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~~ 273 (293)
T 3u3w_A 213 EESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMH 273 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCCH
Confidence 999999999999986 455677899999999999999 6899999999999999999997
No 49
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.59 E-value=7.8e-07 Score=85.79 Aligned_cols=136 Identities=14% Similarity=0.060 Sum_probs=115.2
Q ss_pred cchhHHHhhcC---CCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCc
Q psy9584 2 CIQCLQAVFNF---KPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLS 78 (466)
Q Consensus 2 ai~CLeAvl~~---~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~ 78 (466)
|+.+++.+++. ...+..++.+...+|.+++ ...+.++|..++++|+.+.+..+...+....+...+|.+|...|.+
T Consensus 134 A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y 212 (293)
T 2qfc_A 134 CILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY 212 (293)
T ss_dssp HHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhH
Confidence 67788777743 2355668999999998854 4889999999999999988877655566668999999999999999
Q ss_pred cchhHHHHHHHHhhc--hhhhhHHHHHHHHHHHhcccccHHHH-HHHHHhHHHHHHHhcChHH
Q psy9584 79 NLSKPILRRAIELSQ--HSIYWHCRLIFQLAQIHAGEKDYELA-SSLLGVGVDYANISNAQYT 138 (466)
Q Consensus 79 ~~ak~~l~k~i~~s~--~~~~W~~~~~fqLA~i~~~~~D~~~A-~~~L~~g~~~A~~~~d~~~ 138 (466)
..|...+++++++.. +.......+++.+|.++...|+++.| .++++++..++...|++.+
T Consensus 213 ~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~~~ 275 (293)
T 2qfc_A 213 EESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAY 275 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcHhh
Confidence 999999999999875 34456688889999999999999999 8889999999999999744
No 50
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.57 E-value=5.5e-06 Score=82.87 Aligned_cols=224 Identities=11% Similarity=0.015 Sum_probs=157.3
Q ss_pred HHHHHHhCCccchhHHHHHHHHhhch-------------hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcC
Q psy9584 69 AELYETQLLSNLSKPILRRAIELSQH-------------SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNA 135 (466)
Q Consensus 69 a~~y~~~~~~~~ak~~l~k~i~~s~~-------------~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d 135 (466)
|+-+...|++..|...+.++++..+. ...|.-..+.+||.+|...||++.|++.++....+..+.++
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 55566777888888888888887651 23455666789999999999999999999999999887665
Q ss_pred hHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHH
Q psy9584 136 QYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSI 215 (466)
Q Consensus 136 ~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~ 215 (466)
.... ..+.+.++.+... .|. +.+.+.++-.++.++ +
T Consensus 91 ~~~~--------------------~~~~~~l~~~~~~-~~~--~~~a~~~~~~~~~~~---------------~------ 126 (434)
T 4b4t_Q 91 SKTV--------------------KVLKTLIEKFEQV-PDS--LDDQIFVCEKSIEFA---------------K------ 126 (434)
T ss_dssp HHHH--------------------HHHHHHHHHHCSC-CSC--HHHHHHHHHHHHHHH---------------H------
T ss_pred hHHH--------------------HHHHHHHHHHHhC-CCC--HHHHHHHHHHHHHHH---------------H------
Confidence 5211 1112223333333 444 556666666655544 1
Q ss_pred HHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHh
Q psy9584 216 LTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLR 295 (466)
Q Consensus 216 q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~ 295 (466)
. ..+...++-+..|||.+|..
T Consensus 127 -~----------------------------------------------------------~~~~~~~~~~~~~la~~~~~ 147 (434)
T 4b4t_Q 127 -R----------------------------------------------------------EKRVFLKHSLSIKLATLHYQ 147 (434)
T ss_dssp -H----------------------------------------------------------SSCCSSHHHHHHHHHHHHHH
T ss_pred -H----------------------------------------------------------hCccHHHHHHHHHHHHHHHH
Confidence 1 11344567789999999999
Q ss_pred CCCchH---H-HHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhh-hhHHHhHHHHHH
Q psy9584 296 GKREGD---F-AALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDL-NRLTSCSLVLLG 370 (466)
Q Consensus 296 ~~~~~e---~-~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l-~~l~~~~l~llg 370 (466)
.|.-.+ + .+++..... ...+...+.++...|-..+..+++.+|+.+++++++++++... ..+.+..+..+|
T Consensus 148 ~g~~~~A~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g 223 (434)
T 4b4t_Q 148 KKQYKDSLALINDLLREFKK----LDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSG 223 (434)
T ss_dssp HTCHHHHHHHHHHHHHHHTT----SSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHh----cccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHH
Confidence 773222 2 222222221 1122233555555666668999999999999999999998865 577888999999
Q ss_pred HHHHhcCChHHHHHhhHHHHHHhhcCCCh
Q psy9584 371 HIFLSLGNHRESMNMVTPAMQLASKIPDV 399 (466)
Q Consensus 371 ~i~l~~~~~~ea~~~~~~a~~lAkK~~D~ 399 (466)
.++...|++.+|.+....+........+.
T Consensus 224 ~~~~~~~~y~~A~~~~~~a~~~~~~~~~~ 252 (434)
T 4b4t_Q 224 ILHCEDKDYKTAFSYFFESFESYHNLTTH 252 (434)
T ss_dssp HHTTSSSCHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999888777653
No 51
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.57 E-value=1.1e-06 Score=88.00 Aligned_cols=234 Identities=11% Similarity=-0.021 Sum_probs=157.4
Q ss_pred HHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhH
Q psy9584 104 FQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYL 183 (466)
Q Consensus 104 fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L 183 (466)
++-|.-...+|||..|++.+..+.+.....++.... ...........+.++..++.++.. +|. +.+.+
T Consensus 8 l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~l~~~y~~-~~~--~~~a~ 75 (434)
T 4b4t_Q 8 LEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAG---------ASVDDKRRNEQETSILELGQLYVT-MGA--KDKLR 75 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSS---------SSBCSHHHHHHHHHHHHHHHHHHH-HTC--HHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHH---------HHHHHHHhhhHHHHHHHHHHHHHH-CCC--HHHHH
Confidence 455777788999999999999999888776664000 000011123345667777777766 455 56666
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHH
Q psy9584 184 KVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFG 263 (466)
Q Consensus 184 ~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Fl 263 (466)
.+|-.++.+. + .
T Consensus 76 ~~~~~~~~~~---------------~-------~---------------------------------------------- 87 (434)
T 4b4t_Q 76 EFIPHSTEYM---------------M-------Q---------------------------------------------- 87 (434)
T ss_dssp HHHHHTHHHH---------------H-------T----------------------------------------------
T ss_pred HHHHHHHHHH---------------H-------H----------------------------------------------
Confidence 6666655444 1 1
Q ss_pred hcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHH
Q psy9584 264 VTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYN 340 (466)
Q Consensus 264 v~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~ 340 (466)
.++......+..+++.+|...+... ++++..-.+.++ .....+++.+..--|-.-+.+|+|.
T Consensus 88 ------------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~ 152 (434)
T 4b4t_Q 88 ------------FAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR---EKRVFLKHSLSIKLATLHYQKKQYK 152 (434)
T ss_dssp ------------SCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH---SSCCSSHHHHHHHHHHHHHHHTCHH
T ss_pred ------------ccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH---hCccHHHHHHHHHHHHHHHHccChH
Confidence 0123334456677777777765322 233333222111 1111222333222333337899999
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCCh-hHHHHHHHHHHHHHHHcCCc
Q psy9584 341 EAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDV-HVQLWASAILKDLYKILNDP 419 (466)
Q Consensus 341 eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~-~~qlw~~~lL~~ly~~~g~~ 419 (466)
+|..++++.++.....+.....+.+++.+|.+|...||+.+|....+.++.++.++++. ..+......+-.+|...||+
T Consensus 153 ~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y 232 (434)
T 4b4t_Q 153 DSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDY 232 (434)
T ss_dssp HHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999986 34455567777888899999
Q ss_pred hHHHHHHHHHHHH
Q psy9584 420 VRENEALQMHCNF 432 (466)
Q Consensus 420 ~~~~e~~~~~~~~ 432 (466)
+.|..++......
T Consensus 233 ~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 233 KTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9998876655443
No 52
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.56 E-value=5.9e-05 Score=68.70 Aligned_cols=232 Identities=14% Similarity=0.043 Sum_probs=151.3
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch--
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH-- 94 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~-- 94 (466)
..+|.+...+|..++ ...+.++|..++++++.+. . . ..+...+|.+|...|.+..+...++++++....
T Consensus 2 ~~~a~~~~~~g~~~~-~~~~~~~A~~~~~~a~~~~-~---~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 72 (258)
T 3uq3_A 2 GSMADKEKAEGNKFY-KARQFDEAIEHYNKAWELH-K---D----ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMR 72 (258)
T ss_dssp HHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHS-C---C----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhh-c---c----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccc
Confidence 357889999998865 4678999999999998875 2 1 357889999999999999999999999998753
Q ss_pred -hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhh
Q psy9584 95 -SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENW 173 (466)
Q Consensus 95 -~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~ 173 (466)
...+....++.+|.++...||++.|++.++++..+... -.++..+ +..+.++....++.+.
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-----~~~~~~~------------~~~~~a~~~~~~~~~~- 134 (258)
T 3uq3_A 73 ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT-----ADILTKL------------RNAEKELKKAEAEAYV- 134 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-----HHHHHHH------------HHHHHHHHHHHHHHHC-
T ss_pred cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch-----hHHHHHH------------hHHHHHHHHHHHHHHc-
Confidence 23444778889999999999999999999999886432 1111111 1122222222222221
Q ss_pred ccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHH
Q psy9584 174 TGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLV 253 (466)
Q Consensus 174 ~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~ 253 (466)
.| ....+++.. ...+...|+...+...+++.- .. .|
T Consensus 135 --~~---~~~~~~~~~--~~~~~~~~~~~~A~~~~~~a~---~~--~~-------------------------------- 170 (258)
T 3uq3_A 135 --NP---EKAEEARLE--GKEYFTKSDWPNAVKAYTEMI---KR--AP-------------------------------- 170 (258)
T ss_dssp --CH---HHHHHHHHH--HHHHHHTTCHHHHHHHHHHHH---HH--CT--------------------------------
T ss_pred --Cc---chHHHHHHH--HHHHHHhcCHHHHHHHHHHHH---hc--Cc--------------------------------
Confidence 11 122333332 223345566666555554331 11 11
Q ss_pred HHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHh
Q psy9584 254 TVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQG 330 (466)
Q Consensus 254 tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~ 330 (466)
+ ...+..++|.+|...++-. ++++.+-++.|.. +.+++..|
T Consensus 171 --------------------------~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------~~~~~~l~ 214 (258)
T 3uq3_A 171 --------------------------E-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF---------VRAYIRKA 214 (258)
T ss_dssp --------------------------T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------HHHHHHHH
T ss_pred --------------------------c-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH---------HHHHHHHH
Confidence 1 1246788999999977433 3444444455532 11223344
Q ss_pred HHHhhhhcHHHHHHHHHHHHHhhhh
Q psy9584 331 LQSFFQARYNEAKRYLRETLKMANA 355 (466)
Q Consensus 331 ~~~~~~~~~~eAk~~lre~lk~a~~ 355 (466)
......|++.+|.+++++++++...
T Consensus 215 ~~~~~~g~~~~A~~~~~~a~~~~~~ 239 (258)
T 3uq3_A 215 TAQIAVKEYASALETLDAARTKDAE 239 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhChh
Confidence 4447899999999999999998754
No 53
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.54 E-value=7.4e-06 Score=78.90 Aligned_cols=173 Identities=9% Similarity=-0.076 Sum_probs=122.5
Q ss_pred HHhcCchhh------HHhhhhcc---hhhHHHHHHHHHHHHHhCCCc--h-HHHHHHhhhCCCccccccchhhHHHHHHH
Q psy9584 262 FGVTGTAGT------EVERLSQE---RELWTFANLNLAIVYLRGKRE--G-DFAALLERINPETLTSHSHSLRAAAYYVQ 329 (466)
Q Consensus 262 Flv~G~~~~------eAl~~~~~---~~~~~~~~lNlai~Yl~~~~~--~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~ 329 (466)
++..|++.. ++++.... .........++|.+|...+.- + ++++.+-.+.++.. .....+.+++--
T Consensus 85 ~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~l 161 (293)
T 2qfc_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI---DVYQNLYIENAI 161 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSS---CTTHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC---chHHHHHHHHHH
Confidence 567777754 35544221 222334567789999997632 2 34444333333211 111123333445
Q ss_pred hHHHhhhhcHHHHHHHHHHHHHhhhhhh-hhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHH
Q psy9584 330 GLQSFFQARYNEAKRYLRETLKMANAED-LNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAI 408 (466)
Q Consensus 330 ~~~~~~~~~~~eAk~~lre~lk~a~~~~-l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~l 408 (466)
|..-+.+|+|++|..++++++++..... ...+.+.++..+|.+|...|++++|.+....|+.++.+.++....-.+...
T Consensus 162 g~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~ 241 (293)
T 2qfc_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 5555889999999999999999877664 345555789999999999999999999999999999988887777777788
Q ss_pred HHHHHHHcCCchHH-HHHHHHHHHHHHHHH
Q psy9584 409 LKDLYKILNDPVRE-NEALQMHCNFSQMLL 437 (466)
Q Consensus 409 L~~ly~~~g~~~~~-~e~~~~~~~~s~~l~ 437 (466)
+..+|...|++++| .++++.-..+.+..-
T Consensus 242 lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~ 271 (293)
T 2qfc_A 242 RGECLRKLEYEEAEIEDAYKKASFFFDILE 271 (293)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999 777777666665543
No 54
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.54 E-value=1.4e-05 Score=75.20 Aligned_cols=94 Identities=15% Similarity=0.103 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH----hCCccchhHHHHHHHHhhchh
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYET----QLLSNLSKPILRRAIELSQHS 95 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~----~~~~~~ak~~l~k~i~~s~~~ 95 (466)
+.+++.+|.+++. ..+.++|..+++++.. .. . ..+...||.+|.. .+++..+...++++++..
T Consensus 6 ~~a~~~lg~~~~~-~~~~~~A~~~~~~a~~---~~--~----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--- 72 (273)
T 1ouv_A 6 PKELVGLGAKSYK-EKDFTQAKKYFEKACD---LK--E----NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--- 72 (273)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH---TT--C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---
T ss_pred hHHHHHHHHHHHh-CCCHHHHHHHHHHHHH---CC--C----HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---
Confidence 5677888887554 4689999999999876 21 2 2578889999999 888888999999988874
Q ss_pred hhhHHHHHHHHHHHhcc----cccHHHHHHHHHhHHHH
Q psy9584 96 IYWHCRLIFQLAQIHAG----EKDYELASSLLGVGVDY 129 (466)
Q Consensus 96 ~~W~~~~~fqLA~i~~~----~~D~~~A~~~L~~g~~~ 129 (466)
....++.+|.++.. .+|+..|++.++++++.
T Consensus 73 ---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 73 ---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL 107 (273)
T ss_dssp ---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc
Confidence 23455678888887 99999999999988754
No 55
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.53 E-value=2.3e-05 Score=76.28 Aligned_cols=188 Identities=10% Similarity=0.001 Sum_probs=134.6
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc-
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ- 93 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~- 93 (466)
+.-.+|...+.-+..++....+.++|..++++++.+....+ -...-..++..++.+|...|.+..+...+++++++.+
T Consensus 30 ~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~ 108 (307)
T 2ifu_A 30 PDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNR-SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVE 108 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 55667777777666677889999999999999999887754 4556678889999999999999999999999999986
Q ss_pred -hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHH--HHHHHHHHHHHHhcccCccHHHHHHHHHhhHh
Q psy9584 94 -HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYT--RVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQV 170 (466)
Q Consensus 94 -~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~--~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~ 170 (466)
+.+......+..+|.++.. ||++.|++.+++++++....|++.. .++..++.++..+ .+.++....+.++-.+.
T Consensus 109 ~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~--g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 109 NGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQ--QKFDEAAASLQKEKSMY 185 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHH
Confidence 4556677888899999988 9999999999999999999888653 3444444444333 23333334444544444
Q ss_pred hhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHH
Q psy9584 171 ENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQL 211 (466)
Q Consensus 171 ~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqL 211 (466)
+.. +. .. .. .....-...+++..|+...+...+++.
T Consensus 186 ~~~-~~--~~-~~-~~~~~~~g~~~~~~g~~~~A~~~~~~a 221 (307)
T 2ifu_A 186 KEM-EN--YP-TC-YKKCIAQVLVQLHRADYVAAQKCVRES 221 (307)
T ss_dssp HHT-TC--HH-HH-HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHc-CC--hh-HH-HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 431 11 11 11 112223345567778888887777544
No 56
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.52 E-value=0.00056 Score=70.55 Aligned_cols=126 Identities=15% Similarity=0.145 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhC-----CCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhh
Q psy9584 284 FANLNLAIVYLRG-----KREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355 (466)
Q Consensus 284 ~~~lNlai~Yl~~-----~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~ 355 (466)
.+..++|.+|..+ +... +++...-+.++ +.....| |.+++ .+ -...++.+|.++++++.+..+
T Consensus 292 ~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~---~~a~~~l-g~~y~-~~---g~~~~~~~A~~~~~~a~~~~~- 362 (490)
T 2xm6_A 292 DGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGD---ATAQANL-GAIYF-RL---GSEEEHKKAVEWFRKAAAKGE- 362 (490)
T ss_dssp HHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTC---HHHHHHH-HHHHH-HS---CCHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCC---HHHHHHH-HHHHH-hC---CCcccHHHHHHHHHHHHHCCC-
Confidence 4678899999987 4222 23433333322 2222233 43322 11 013489999999999987522
Q ss_pred hhhhhHHHhHHHHHHHHHHh----cCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHH----cCCchHHHHHHH
Q psy9584 356 EDLNRLTSCSLVLLGHIFLS----LGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKI----LNDPVRENEALQ 427 (466)
Q Consensus 356 ~~l~~l~~~~l~llg~i~l~----~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~----~g~~~~~~e~~~ 427 (466)
..++..||.+|.. .+|.++|.+..+.|... .+. .+..-|..+|.. .||+++|.++++
T Consensus 363 -------~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~----~~~----~a~~~Lg~~y~~g~g~~~d~~~A~~~~~ 427 (490)
T 2xm6_A 363 -------KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ----GLS----AAQVQLGEIYYYGLGVERDYVQAWAWFD 427 (490)
T ss_dssp -------HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TCH----HHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC----CCH----HHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 4577889999998 89999999999988763 332 344557788887 899999999888
Q ss_pred HHHHHH
Q psy9584 428 MHCNFS 433 (466)
Q Consensus 428 ~~~~~s 433 (466)
.-....
T Consensus 428 ~A~~~~ 433 (490)
T 2xm6_A 428 TASTND 433 (490)
T ss_dssp HHHHHH
T ss_pred HHHHCC
Confidence 766654
No 57
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.50 E-value=0.0003 Score=72.57 Aligned_cols=320 Identities=15% Similarity=0.057 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH----hCCccchhHHHHHHHHh
Q psy9584 19 EARTHLQLGNILLTH---TKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYET----QLLSNLSKPILRRAIEL 91 (466)
Q Consensus 19 Ea~~rLrla~lL~~~---T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~----~~~~~~ak~~l~k~i~~ 91 (466)
.+.++..+|.+++.- ..|.+.|..+++++... + -..+++.||.+|.. .++++.+...++++++.
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~---~------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 108 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ---G------YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK 108 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---T------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC---C------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 356788899885541 68999999999998653 2 24689999999999 78888899999998875
Q ss_pred hchhhhhHHHHHHHHHHHhcc----cccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhc--ccCccHHHHHHHH
Q psy9584 92 SQHSIYWHCRLIFQLAQIHAG----EKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLI--DKKVNDAVQLLTQ 165 (466)
Q Consensus 92 s~~~~~W~~~~~fqLA~i~~~----~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~--~~~~~~v~~al~~ 165 (466)
- . -...+.||.++.. ++|+..|++.++++++ .|++ ...+.+..+...=. ..+. +.++.-
T Consensus 109 ~--~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~----~~~~--~a~~~Lg~~y~~g~g~~~d~---~~A~~~ 173 (490)
T 2xm6_A 109 G--L----PQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE----QGRD--SGQQSMGDAYFEGDGVTRDY---VMAREW 173 (490)
T ss_dssp T--C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH----TTCH--HHHHHHHHHHHHTSSSCCCH---HHHHHH
T ss_pred C--C----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH----CCCH--HHHHHHHHHHHcCCCCCCCH---HHHHHH
Confidence 3 2 2345568888876 8999999999998755 3554 33444444332110 1122 222222
Q ss_pred HhhHhhhhccccchHhhHHHHHHHHHHHhhhh---hhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCc
Q psy9584 166 AGYQVENWTGSQYQKEYLKVFFLVLQVCHYLM---AGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMP 242 (466)
Q Consensus 166 ~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~---~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLp 242 (466)
.....+. |.+ ..++. |-.++.-. .++...+-..+++ ..+. .
T Consensus 174 ~~~a~~~--~~~------~a~~~-Lg~~y~~g~g~~~~~~~A~~~~~~---a~~~--~---------------------- 217 (490)
T 2xm6_A 174 YSKAAEQ--GNV------WSCNQ-LGYMYSRGLGVERNDAISAQWYRK---SATS--G---------------------- 217 (490)
T ss_dssp HHHHHHT--TCH------HHHHH-HHHHHHHTSSSCCCHHHHHHHHHH---HHHT--T----------------------
T ss_pred HHHHHHC--CCH------HHHHH-HHHHHhcCCCCCcCHHHHHHHHHH---HHHC--C----------------------
Confidence 2111211 221 11122 11111110 2233333333222 1111 0
Q ss_pred chhHHHHHHHHHHhhhhhHHH----hcCchhhHHhhh---hcchhhHHHHHHHHHHHHHhC----CCchH---HHHHHhh
Q psy9584 243 KEHLYVVVYLVTVIGHLKFFG----VTGTAGTEVERL---SQERELWTFANLNLAIVYLRG----KREGD---FAALLER 308 (466)
Q Consensus 243 k~~l~aLvyl~tv~~~lk~Fl----v~G~~~~eAl~~---~~~~~~~~~~~lNlai~Yl~~----~~~~e---~~~~l~~ 308 (466)
+..+...+..+ |. +.++... |+.. .-+. ....+..++|.+|..+ +...+ +++..-+
T Consensus 218 --~~~a~~~lg~~------y~~g~g~~~~~~~-A~~~~~~a~~~-~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~ 287 (490)
T 2xm6_A 218 --DELGQLHLADM------YYFGIGVTQDYTQ-SRVLFSQSAEQ-GNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAE 287 (490)
T ss_dssp --CHHHHHHHHHH------HHHTSSSCCCHHH-HHHHHHHHHTT-TCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHH------HHcCCCCCCCHHH-HHHHHHHHHHC-CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Confidence 01123333333 22 2333322 2222 1111 1234778999999983 32222 3333322
Q ss_pred hCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcC---ChHHHHHh
Q psy9584 309 INPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLG---NHRESMNM 385 (466)
Q Consensus 309 i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~---~~~ea~~~ 385 (466)
. +.+.....| |.+ |..+. .-..+++.+|.++++++.+..+. .+...||.+|...| +.++|.+.
T Consensus 288 ~---~~~~a~~~L-g~~-y~~~~-~g~~~~~~~A~~~~~~a~~~~~~--------~a~~~lg~~y~~~g~~~~~~~A~~~ 353 (490)
T 2xm6_A 288 Q---GNSDGQYYL-AHL-YDKGA-EGVAKNREQAISWYTKSAEQGDA--------TAQANLGAIYFRLGSEEEHKKAVEW 353 (490)
T ss_dssp T---TCHHHHHHH-HHH-HHHCB-TTBCCCHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred c---CCHHHHHHH-HHH-HHcCC-CCCcCCHHHHHHHHHHHHhcCCH--------HHHHHHHHHHHhCCCcccHHHHHHH
Confidence 2 222222223 333 21110 01127999999999999886432 36778999999876 78899998
Q ss_pred hHHHHHHhhcCCChhHHHHHHHHHHHHHHH----cCCchHHHHHHHHHH
Q psy9584 386 VTPAMQLASKIPDVHVQLWASAILKDLYKI----LNDPVRENEALQMHC 430 (466)
Q Consensus 386 ~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~----~g~~~~~~e~~~~~~ 430 (466)
.+.|... .+. .+..-|..+|.. .+|+++|.++++.-.
T Consensus 354 ~~~a~~~----~~~----~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~ 394 (490)
T 2xm6_A 354 FRKAAAK----GEK----AAQFNLGNALLQGKGVKKDEQQAAIWMRKAA 394 (490)
T ss_dssp HHHHHHT----TCH----HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHC----CCH----HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 8888764 453 344567777877 889999998887643
No 58
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.49 E-value=1.7e-05 Score=76.75 Aligned_cols=187 Identities=14% Similarity=0.082 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc--h
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ--H 94 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~--~ 94 (466)
..||...++-+..++....+.++|..++++|+.+....+ ....-..++..+|.+|...|.+..|...+++++++.. +
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g 111 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAG-NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG 111 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC
Confidence 678888888888888899999999999999999877644 4455678899999999999999999999999999986 3
Q ss_pred hhhhHHHHHHHHHHHhccc-ccHHHHHHHHHhHHHHHHHhcChHH--HHHHHHHHHHHHhcccCccHHHHHHHHHhhHhh
Q psy9584 95 SIYWHCRLIFQLAQIHAGE-KDYELASSLLGVGVDYANISNAQYT--RVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVE 171 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~~~-~D~~~A~~~L~~g~~~A~~~~d~~~--~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~ 171 (466)
.+......+..+|.++..+ ||++.|++.+++++.+....+++.. .++..++.++..+ .+.++....+.++..+.+
T Consensus 112 ~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~--g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 112 QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALD--GQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHh
Confidence 4455567788999999997 9999999999999999998887643 3444444444333 223332333444333332
Q ss_pred hhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHH
Q psy9584 172 NWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQ 210 (466)
Q Consensus 172 ~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkq 210 (466)
. .+........++..+ ..+++..|+...+...+++
T Consensus 190 ~---~~~~~~~~~~~~~~l-g~~~~~~g~~~~A~~~~~~ 224 (292)
T 1qqe_A 190 G---NRLSQWSLKDYFLKK-GLCQLAATDAVAAARTLQE 224 (292)
T ss_dssp S---CTTTGGGHHHHHHHH-HHHHHHTTCHHHHHHHHHG
T ss_pred c---CCcccHHHHHHHHHH-HHHHHHcCCHHHHHHHHHH
Confidence 2 211111112122212 3346677888777776644
No 59
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.48 E-value=3.3e-05 Score=72.66 Aligned_cols=228 Identities=13% Similarity=0.087 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcc----cccHHHHHHHHHhHHHHHHHhcChH
Q psy9584 62 FEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAG----EKDYELASSLLGVGVDYANISNAQY 137 (466)
Q Consensus 62 ~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~----~~D~~~A~~~L~~g~~~A~~~~d~~ 137 (466)
.+++..||.+|...|.+..+...++++++ .+.+ ..++.+|.++.. .+|+..|++.++++++. +++
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~----~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----~~~- 74 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKEN----SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL----NYS- 74 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCH----HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TCH-
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCH----HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC----CCH-
Confidence 46788999999999999999999999998 2232 345678999988 99999999999988754 332
Q ss_pred HHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHH
Q psy9584 138 TRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILT 217 (466)
Q Consensus 138 ~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~ 217 (466)
..++.++.+...- ....|. +.+.++.|-+.++ .
T Consensus 75 -~a~~~lg~~~~~g-------------------~~~~~~--~~~A~~~~~~a~~-------------------------~ 107 (273)
T 1ouv_A 75 -NGCHLLGNLYYSG-------------------QGVSQN--TNKALQYYSKACD-------------------------L 107 (273)
T ss_dssp -HHHHHHHHHHHHT-------------------SSSCCC--HHHHHHHHHHHHH-------------------------T
T ss_pred -HHHHHHHHHHhCC-------------------CCcccC--HHHHHHHHHHHHH-------------------------c
Confidence 2222222222100 001222 3444444443221 0
Q ss_pred hcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHh--
Q psy9584 218 IMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLR-- 295 (466)
Q Consensus 218 i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~-- 295 (466)
. ...+..|+|.+|..
T Consensus 108 --~-------------------------------------------------------------~~~a~~~lg~~~~~~~ 124 (273)
T 1ouv_A 108 --K-------------------------------------------------------------YAEGCASLGGIYHDGK 124 (273)
T ss_dssp --T-------------------------------------------------------------CHHHHHHHHHHHHHCS
T ss_pred --C-------------------------------------------------------------CccHHHHHHHHHHcCC
Confidence 0 12356788888887
Q ss_pred --CCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHH
Q psy9584 296 --GKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLG 370 (466)
Q Consensus 296 --~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg 370 (466)
.++.. ++++..-+.++ +.....+ |.+ |..|. ...+++.+|.++++++++..+ ..++..+|
T Consensus 125 ~~~~~~~~A~~~~~~a~~~~~---~~a~~~l-g~~-~~~~~--~~~~~~~~A~~~~~~a~~~~~--------~~a~~~lg 189 (273)
T 1ouv_A 125 VVTRDFKKAVEYFTKACDLND---GDGCTIL-GSL-YDAGR--GTPKDLKKALASYDKACDLKD--------SPGCFNAG 189 (273)
T ss_dssp SSCCCHHHHHHHHHHHHHTTC---HHHHHHH-HHH-HHHTS--SSCCCHHHHHHHHHHHHHTTC--------HHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHhcCc---HHHHHHH-HHH-HHcCC--CCCCCHHHHHHHHHHHHHCCC--------HHHHHHHH
Confidence 44322 24444333332 1222222 333 21111 128899999999999998632 35678899
Q ss_pred HHHHh----cCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHH----cCCchHHHHHHHHHHHHH
Q psy9584 371 HIFLS----LGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKI----LNDPVRENEALQMHCNFS 433 (466)
Q Consensus 371 ~i~l~----~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~----~g~~~~~~e~~~~~~~~s 433 (466)
.+|.. .+++++|.+....+... .+ ..+...|..+|.. .||+++|.++++.-....
T Consensus 190 ~~~~~g~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 190 NMYHHGEGATKNFKEALARYSKACEL----EN----GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HHHHHTCSSCCCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcC
Confidence 99999 99999999999888765 33 3456677888888 999999988887665543
No 60
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.46 E-value=6.1e-06 Score=79.48 Aligned_cols=149 Identities=11% Similarity=-0.049 Sum_probs=115.8
Q ss_pred HHHHHHHHHHhCCC--ch-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhh-hhhh
Q psy9584 285 ANLNLAIVYLRGKR--EG-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAE-DLNR 360 (466)
Q Consensus 285 ~~lNlai~Yl~~~~--~~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~-~l~~ 360 (466)
.+.++|.+|...+. ++ ++++.+-.+.++.- .....+.++.--|..-+.+|+|++|..+++++++..... +...
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~---~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI---DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCS---CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccc---cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchh
Confidence 45568999888652 23 34444433433211 111223333445555588999999999999999998877 6778
Q ss_pred HHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHHHHH
Q psy9584 361 LTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILND-PVRENEALQMHCNFSQML 436 (466)
Q Consensus 361 l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~-~~~~~e~~~~~~~~s~~l 436 (466)
..+.++.-+|.+|...|++++|.+....|+.++++.++....--+...+..+|...|+ +++|.++++.-..+.+.+
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 8888999999999999999999999999999999999987777788889999999995 599999999888888765
No 61
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.45 E-value=0.00016 Score=66.32 Aligned_cols=68 Identities=22% Similarity=0.132 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHH
Q psy9584 58 DDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDY 129 (466)
Q Consensus 58 ~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~ 129 (466)
.+....+...+|.+|...|++..+...++++++..... ...++.+|.++...||++.|++.++.+++.
T Consensus 33 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 100 (252)
T 2ho1_A 33 RDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS----ADAHAALAVVFQTEMEPKLADEEYRKALAS 100 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34457788888888888888888888888888876443 234556788888888888888877776654
No 62
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.45 E-value=9.3e-06 Score=84.66 Aligned_cols=236 Identities=13% Similarity=0.042 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCc-cchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHH
Q psy9584 39 LARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLS-NLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYE 117 (466)
Q Consensus 39 ~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~-~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~ 117 (466)
.++..+++++...+...........+...+|++|...|.+ +.|...++++++..... ...++.+|.++...||++
T Consensus 79 ~~~~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~----~~a~~~lg~~~~~~g~~~ 154 (474)
T 4abn_A 79 DVQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL----VEAWNQLGEVYWKKGDVT 154 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC----HHHHHHHHHHHHHcCCHH
Confidence 5666677777765554445556788999999999999999 99999999999988654 345668999999999999
Q ss_pred HHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhh
Q psy9584 118 LASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLM 197 (466)
Q Consensus 118 ~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~ 197 (466)
.|++.+++++++. |.-.++..++.++..+...... +. .|. +.+++..|-..+++
T Consensus 155 ~A~~~~~~al~~~-----p~~~~~~~lg~~~~~~~~~~~~-------------~~-~g~--~~~A~~~~~~al~~----- 208 (474)
T 4abn_A 155 SAHTCFSGALTHC-----KNKVSLQNLSMVLRQLQTDSGD-------------EH-SRH--VMDSVRQAKLAVQM----- 208 (474)
T ss_dssp HHHHHHHHHHTTC-----CCHHHHHHHHHHHTTCCCSCHH-------------HH-HHH--HHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHhhC-----CCHHHHHHHHHHHHHhccCChh-------------hh-hhh--HHHHHHHHHHHHHh-----
Confidence 9999999988763 2124444444333221110000 00 111 23333333332221
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhc
Q psy9584 198 AGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQ 277 (466)
Q Consensus 198 ~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~ 277 (466)
.|+
T Consensus 209 ----------------------~p~------------------------------------------------------- 211 (474)
T 4abn_A 209 ----------------------DVL------------------------------------------------------- 211 (474)
T ss_dssp ----------------------CTT-------------------------------------------------------
T ss_pred ----------------------CCC-------------------------------------------------------
Confidence 221
Q ss_pred chhhHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhh
Q psy9584 278 ERELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAED 357 (466)
Q Consensus 278 ~~~~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~ 357 (466)
+ ..+..|+|.+|... +|..|- ..+++.+|.+++++++++...
T Consensus 212 ~----~~~~~~lg~~~~~~-----------------------------~~~~~~---~~g~~~~A~~~~~~al~~~p~-- 253 (474)
T 4abn_A 212 D----GRSWYILGNAYLSL-----------------------------YFNTGQ---NPKISQQALSAYAQAEKVDRK-- 253 (474)
T ss_dssp C----HHHHHHHHHHHHHH-----------------------------HHHTTC---CHHHHHHHHHHHHHHHHHCGG--
T ss_pred C----HHHHHHHHHHHHHH-----------------------------HHhhcc---ccchHHHHHHHHHHHHHhCCC--
Confidence 1 12456777666654 011110 237899999999999997542
Q ss_pred hhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHH
Q psy9584 358 LNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEAL 426 (466)
Q Consensus 358 l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~ 426 (466)
..-...++..+|.++...|++++|.+....++.+.. +. .++...+..++...|++++|.+.+
T Consensus 254 -~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p---~~---~~a~~~l~~~~~~lg~~~eAi~~~ 315 (474)
T 4abn_A 254 -ASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDP---AW---PEPQQREQQLLEFLSRLTSLLESK 315 (474)
T ss_dssp -GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---TC---HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CC---HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112345678899999999999999999999988753 32 345567788888999888887644
No 63
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.45 E-value=1.4e-05 Score=73.92 Aligned_cols=89 Identities=13% Similarity=0.124 Sum_probs=73.8
Q ss_pred cCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhccc
Q psy9584 34 TKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGE 113 (466)
Q Consensus 34 T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~ 113 (466)
..+.++|...+++++... +.-......+...+|.+|...|.+..+...++++++..... ...++.+|.++...
T Consensus 18 ~~~~~~A~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 18 TLQQEVILARMEQILASR---ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM----PEVFNYLGIYLTQA 90 (275)
T ss_dssp CHHHHHHHHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHhcc---cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHHHc
Confidence 467899999999986642 22345678899999999999999999999999999987644 34566889999999
Q ss_pred ccHHHHHHHHHhHHHH
Q psy9584 114 KDYELASSLLGVGVDY 129 (466)
Q Consensus 114 ~D~~~A~~~L~~g~~~ 129 (466)
|+++.|++.++++++.
T Consensus 91 ~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLEL 106 (275)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhc
Confidence 9999999999998875
No 64
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.34 E-value=2.4e-05 Score=73.41 Aligned_cols=169 Identities=15% Similarity=0.062 Sum_probs=121.8
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH-------
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYET------- 74 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~------- 74 (466)
|+.+++.+++..|.....+.+++.+|.++ ....+.++|..++++++.+-...+ ....+.+.+|.+|..
T Consensus 34 A~~~~~~~l~~~p~~~~~~~a~~~lg~~~-~~~~~~~~A~~~~~~~l~~~p~~~----~~~~a~~~lg~~~~~~~~~~~~ 108 (261)
T 3qky_A 34 AIEYFKAVFTYGRTHEWAADAQFYLARAY-YQNKEYLLAASEYERFIQIYQIDP----RVPQAEYERAMCYYKLSPPYEL 108 (261)
T ss_dssp HHHHHHHHGGGCSCSTTHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCT----THHHHHHHHHHHHHHHCCCTTS
T ss_pred HHHHHHHHHHhCCCCcchHHHHHHHHHHH-HHhCcHHHHHHHHHHHHHHCCCCc----hhHHHHHHHHHHHHHhcccccc
Confidence 78889999987775555678889999885 457899999999999988633222 234788999999999
Q ss_pred -hCCccchhHHHHHHHHhhchhhhhHHHHH--------------HHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHH
Q psy9584 75 -QLLSNLSKPILRRAIELSQHSIYWHCRLI--------------FQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTR 139 (466)
Q Consensus 75 -~~~~~~ak~~l~k~i~~s~~~~~W~~~~~--------------fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~ 139 (466)
.|.+..|...+++.++...+.+.. .... +.+|.++...|||..|+..++..++..-. .....+
T Consensus 109 ~~~~~~~A~~~~~~~l~~~p~~~~~-~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~ 186 (261)
T 3qky_A 109 DQTDTRKAIEAFQLFIDRYPNHELV-DDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPD-TPWADD 186 (261)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCTTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHH
T ss_pred cchhHHHHHHHHHHHHHHCcCchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-CchHHH
Confidence 999999999999999987543222 1222 78899999999999999999998875432 112456
Q ss_pred HHHHHHHHHHHhcccCc-----cHHHHHHHHHhhHhhhhcccc
Q psy9584 140 VLFLLSRCMLLLIDKKV-----NDAVQLLTQAGYQVENWTGSQ 177 (466)
Q Consensus 140 ~lf~ls~~~~ll~~~~~-----~~v~~al~~~~~l~~~~~g~~ 177 (466)
+++.++.+...+...+. +..+.++.....+++..++.+
T Consensus 187 a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 229 (261)
T 3qky_A 187 ALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSP 229 (261)
T ss_dssp HHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCCh
Confidence 77878777765543322 334455555555555544443
No 65
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.27 E-value=0.00016 Score=66.86 Aligned_cols=118 Identities=13% Similarity=-0.005 Sum_probs=96.4
Q ss_pred cchhHHHhhcCCC-ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccc
Q psy9584 2 CIQCLQAVFNFKP-PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNL 80 (466)
Q Consensus 2 ai~CLeAvl~~~~-~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ 80 (466)
|+.+++.+++..+ .|...+.++..+|.+++ ...+.++|..++++++.+... . ..+...||.+|...|.+..
T Consensus 24 A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~---~----~~~~~~la~~~~~~~~~~~ 95 (275)
T 1xnf_A 24 ILARMEQILASRALTDDERAQLLYERGVLYD-SLGLRALARNDFSQALAIRPD---M----PEVFNYLGIYLTQAGNFDA 95 (275)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCC---C----HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhcccccCchhHHHHHHHHHHHH-HcccHHHHHHHHHHHHHcCCC---c----HHHHHHHHHHHHHccCHHH
Confidence 6788888887543 56677889999998854 578999999999999886322 2 3578899999999999999
Q ss_pred hhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 81 SKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 81 ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
+...++++++..... ...++.+|.++...||+..|++.++.+.+...
T Consensus 96 A~~~~~~al~~~~~~----~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 142 (275)
T 1xnf_A 96 AYEAFDSVLELDPTY----NYAHLNRGIALYYGGRDKLAQDDLLAFYQDDP 142 (275)
T ss_dssp HHHHHHHHHHHCTTC----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCccc----cHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 999999999987644 24566889999999999999999999987644
No 66
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.24 E-value=4.3e-05 Score=70.53 Aligned_cols=64 Identities=11% Similarity=-0.055 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 63 EAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 63 ~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
++...+|.++...|.+..+...++++++..-++ ...++.+|.++...|+++.|++.++++++..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~ 69 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQD----PEALYWLARTQLKLGLVNPALENGKTLVART 69 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 467889999999999999999999999887655 3455688999999999999999999988764
No 67
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.19 E-value=0.00013 Score=66.18 Aligned_cols=205 Identities=11% Similarity=0.062 Sum_probs=110.9
Q ss_pred chHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcCh
Q psy9584 57 FDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQ 136 (466)
Q Consensus 57 ~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~ 136 (466)
..+....+...+|.+|...|.+..+...++++++..... ...++.+|.++...|++..|++.++.+.+... .
T Consensus 18 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~----~ 89 (243)
T 2q7f_A 18 GSHMASMTGGQQMGRGSEFGDYEKAAEAFTKAIEENKED----AIPYINFANLLSSVNELERALAFYDKALELDS----S 89 (243)
T ss_dssp ------------------------CCTTHHHHHTTCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----T
T ss_pred CchhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC----c
Confidence 456777888889999999999999999999999876543 34566789999999999999999988776522 1
Q ss_pred HHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHH
Q psy9584 137 YTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSIL 216 (466)
Q Consensus 137 ~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q 216 (466)
...+++ ..+.+... .|. +.+.++.|-.++++
T Consensus 90 ~~~~~~----------------------~la~~~~~-~~~--~~~A~~~~~~~~~~------------------------ 120 (243)
T 2q7f_A 90 AATAYY----------------------GAGNVYVV-KEM--YKEAKDMFEKALRA------------------------ 120 (243)
T ss_dssp CHHHHH----------------------HHHHHHHH-TTC--HHHHHHHHHHHHHH------------------------
T ss_pred chHHHH----------------------HHHHHHHH-hcc--HHHHHHHHHHHHHh------------------------
Confidence 011111 11111111 122 23333333332221
Q ss_pred HhcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhC
Q psy9584 217 TIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRG 296 (466)
Q Consensus 217 ~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~ 296 (466)
.|. + ..+..++|.+|...
T Consensus 121 ---~~~-------------------------------------------------------~----~~~~~~~a~~~~~~ 138 (243)
T 2q7f_A 121 ---GME-------------------------------------------------------N----GDLFYMLGTVLVKL 138 (243)
T ss_dssp ---TCC-------------------------------------------------------S----HHHHHHHHHHHHHT
T ss_pred ---CCC-------------------------------------------------------C----HHHHHHHHHHHHHh
Confidence 111 1 12456788888887
Q ss_pred CCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHH
Q psy9584 297 KREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIF 373 (466)
Q Consensus 297 ~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~ 373 (466)
++.. ++++.+-++.|... .+.+..|...+..|++.+|.++++++++..... ..++..+|.++
T Consensus 139 ~~~~~A~~~~~~~~~~~~~~~---------~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~ 203 (243)
T 2q7f_A 139 EQPKLALPYLQRAVELNENDT---------EARFQFGMCLANEGMLDEALSQFAAVTEQDPGH------ADAFYNAGVTY 203 (243)
T ss_dssp SCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTC------HHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCccH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------HHHHHHHHHHH
Confidence 7433 24444444555321 122334444478899999999999998865432 33677899999
Q ss_pred HhcCChHHHHHhhHHHHHHhhc
Q psy9584 374 LSLGNHRESMNMVTPAMQLASK 395 (466)
Q Consensus 374 l~~~~~~ea~~~~~~a~~lAkK 395 (466)
...|++++|.+....++.+...
T Consensus 204 ~~~~~~~~A~~~~~~~~~~~p~ 225 (243)
T 2q7f_A 204 AYKENREKALEMLDKAIDIQPD 225 (243)
T ss_dssp HHTTCTTHHHHHHHHHHHHCTT
T ss_pred HHccCHHHHHHHHHHHHccCcc
Confidence 9999999999999988886543
No 68
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.18 E-value=0.00038 Score=63.75 Aligned_cols=104 Identities=21% Similarity=0.231 Sum_probs=85.1
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhh
Q psy9584 13 KPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELS 92 (466)
Q Consensus 13 ~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s 92 (466)
...|...+.++..+|.+++ ...+.++|..++++++.+... . ..+...+|.+|...|.+..+...++++++..
T Consensus 30 ~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~~~---~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 101 (252)
T 2ho1_A 30 DKGRDEARDAYIQLGLGYL-QRGNTEQAKVPLRKALEIDPS---S----ADAHAALAVVFQTEMEPKLADEEYRKALASD 101 (252)
T ss_dssp -CCHHHHHHHHHHHHHHHH-HTTCTGGGHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHhcCCC---h----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3467777999999998865 567899999999999876322 2 4678899999999999999999999999987
Q ss_pred chhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHH
Q psy9584 93 QHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVD 128 (466)
Q Consensus 93 ~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~ 128 (466)
... ...++.+|.++...|+++.|++.++.+..
T Consensus 102 ~~~----~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 102 SRN----ARVLNNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cCc----HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 543 34566789999999999999999888765
No 69
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.07 E-value=5e-05 Score=64.44 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchh--
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHS-- 95 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~-- 95 (466)
-.|.++..+|..++ ...+.++|..++++|+.+-.. . ..+++.+|.+|...|.+..+...++++|++....
T Consensus 6 d~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~---~----~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 6 DAAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPS---N----ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCC---C----HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch
Confidence 35778889998865 478899999999999987332 2 4578899999999999999999999999987632
Q ss_pred -hhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHH
Q psy9584 96 -IYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDY 129 (466)
Q Consensus 96 -~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~ 129 (466)
.......++.+|.++...||+..|++.+++++..
T Consensus 78 ~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 78 DYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 2345667889999999999999999999998764
No 70
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.04 E-value=0.0015 Score=57.97 Aligned_cols=127 Identities=15% Similarity=0.100 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhC-CCchHHHHHHhhh--CCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhH
Q psy9584 285 ANLNLAIVYLRG-KREGDFAALLERI--NPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRL 361 (466)
Q Consensus 285 ~~lNlai~Yl~~-~~~~e~~~~l~~i--~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l 361 (466)
+..++|.+|... ++..+....+++. .|. .+. . ..+.+..|......|++.+|..+++++++.....
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~---~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~----- 146 (225)
T 2vq2_A 78 INNNYGWFLCGRLNRPAESMAYFDKALADPT-YPT---P--YIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQF----- 146 (225)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTSTT-CSC---H--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHcCcC-Ccc---h--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Confidence 457788999888 8544322222221 111 111 0 1222344555578999999999999999875442
Q ss_pred HHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhh-cCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q psy9584 362 TSCSLVLLGHIFLSLGNHRESMNMVTPAMQLAS-KIPDVHVQLWASAILKDLYKILNDPVRENEALQMH 429 (466)
Q Consensus 362 ~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAk-K~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~ 429 (466)
..++..+|.++...|++++|.+....++.... ..++ .| .++..+|...|+++.+.++++.-
T Consensus 147 -~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~a~~~~~~~ 208 (225)
T 2vq2_A 147 -PPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQAD----DL--LLGWKIAKALGNAQAAYEYEAQL 208 (225)
T ss_dssp -HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHH----HH--HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHH----HH--HHHHHHHHhcCcHHHHHHHHHHH
Confidence 34678899999999999999999999988754 3222 22 46778899999999987766554
No 71
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.02 E-value=0.00016 Score=74.83 Aligned_cols=105 Identities=22% Similarity=0.126 Sum_probs=52.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCc---cchhHHHHHHHHhhchhhhhHH
Q psy9584 24 LQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLS---NLSKPILRRAIELSQHSIYWHC 100 (466)
Q Consensus 24 Lrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~---~~ak~~l~k~i~~s~~~~~W~~ 100 (466)
.++|.++ ....|.++|...++++... ++ .+++..||.+|...|.. ..+...++++++. . -
T Consensus 7 ~~la~~~-~~~g~~~~A~~~~~~aa~~---g~------~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~---~----~ 69 (452)
T 3e4b_A 7 QRLANEA-LKRGDTVTAQQNYQQLAEL---GY------SEAQVGLADIQVGTRDPAQIKQAEATYRAAADT---S----P 69 (452)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHH---TC------CTGGGTCC----------------------------------
T ss_pred HHHHHHH-HhCCCHHHHHHHHHHHHHC---CC------HHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC---C----H
Confidence 4566654 3356889999999998543 22 34778899999998877 7889999998876 1 2
Q ss_pred HHHHHHHHHhcc-----cccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHh
Q psy9584 101 RLIFQLAQIHAG-----EKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLL 151 (466)
Q Consensus 101 ~~~fqLA~i~~~-----~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll 151 (466)
...+.|+.++.. ++|+..|++.++++++ .|++. ..+.|..+....
T Consensus 70 ~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~----~g~~~--A~~~Lg~~y~~~ 119 (452)
T 3e4b_A 70 RAQARLGRLLAAKPGATEAEHHEAESLLKKAFA----NGEGN--TLIPLAMLYLQY 119 (452)
T ss_dssp -CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHH----TTCSS--CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHH----CCCHH--HHHHHHHHHHhC
Confidence 334566764433 3599999999999876 45553 555555555433
No 72
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.02 E-value=0.00011 Score=81.34 Aligned_cols=161 Identities=17% Similarity=0.099 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHhhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCcc
Q psy9584 244 EHLYVVVYLVTVIGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETL 314 (466)
Q Consensus 244 ~~l~aLvyl~tv~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~ 314 (466)
.+.-++..+..+ +..+|+... +|+++. |+. .-+..|||.+|.+.|+-. ++++.+-+++|..
T Consensus 7 ~~a~al~nLG~~------~~~~G~~~eAi~~~~kAl~l~--P~~-~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~- 76 (723)
T 4gyw_A 7 THADSLNNLANI------KREQGNIEEAVRLYRKALEVF--PEF-AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF- 76 (723)
T ss_dssp HHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHC--SCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred CcHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhC--CCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-
Confidence 356678888888 888888865 366553 222 357899999999988533 3666666677742
Q ss_pred ccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhh
Q psy9584 315 TSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLAS 394 (466)
Q Consensus 315 ~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAk 394 (466)
+....++ | .....+|++++|.+++++++++.... +.++..+|.++...|++++|++..+.|+.+.-
T Consensus 77 ~~a~~nL-g-------~~l~~~g~~~~A~~~~~kAl~l~P~~------~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P 142 (723)
T 4gyw_A 77 ADAYSNM-G-------NTLKEMQDVQGALQCYTRAIQINPAF------ADAHSNLASIHKDSGNIPEAIASYRTALKLKP 142 (723)
T ss_dssp HHHHHHH-H-------HHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHH-H-------HHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 2222223 3 33378999999999999999975543 45788999999999999999999999998854
Q ss_pred cCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Q psy9584 395 KIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQ 434 (466)
Q Consensus 395 K~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s~ 434 (466)
..+ .+..-|..+|...|++++|.+.++.-..+..
T Consensus 143 ~~~------~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~ 176 (723)
T 4gyw_A 143 DFP------DAYCNLAHCLQIVCDWTDYDERMKKLVSIVA 176 (723)
T ss_dssp CCH------HHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred CCh------HHHhhhhhHHHhcccHHHHHHHHHHHHHhCh
Confidence 333 3455678899999999999888776655443
No 73
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.99 E-value=0.00021 Score=65.76 Aligned_cols=127 Identities=13% Similarity=0.091 Sum_probs=97.8
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh------
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQ------ 75 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~------ 75 (466)
|+.+++.+++..|.. +.++..+|.+++ ...+.++|..++++++.+. |.+ ..++..||.+|...
T Consensus 24 A~~~~~~al~~~p~~---~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~---P~~----~~a~~~lg~~~~~~~~~~~~ 92 (217)
T 2pl2_A 24 ALTLFERALKENPQD---PEALYWLARTQL-KLGLVNPALENGKTLVART---PRY----LGGYMVLSEAYVALYRQAED 92 (217)
T ss_dssp HHHHHHHHHTTSSSC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC---TTC----HHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhC---CCc----HHHHHHHHHHHHHhhhhhhh
Confidence 678888888766532 345777887754 5788999999999998873 323 35778999999999
Q ss_pred -----CCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHH
Q psy9584 76 -----LLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCM 148 (466)
Q Consensus 76 -----~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~ 148 (466)
|.++.+...++++++...+.+ ..++.+|.++...|+++.|++.+++++++. +++ .+.+.++.+.
T Consensus 93 ~~~~~g~~~~A~~~~~~al~~~P~~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---~~~--~~~~~la~~~ 161 (217)
T 2pl2_A 93 RERGKGYLEQALSVLKDAERVNPRYA----PLHLQRGLVYALLGERDKAEASLKQALALE---DTP--EIRSALAELY 161 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CCH--HHHHHHHHHH
T ss_pred hcccccCHHHHHHHHHHHHHhCcccH----HHHHHHHHHHHHcCChHHHHHHHHHHHhcc---cch--HHHHHHHHHH
Confidence 999999999999999875442 345678999999999999999999999987 444 3444444444
No 74
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.98 E-value=0.00043 Score=70.69 Aligned_cols=218 Identities=13% Similarity=0.057 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhccccc-HHHHHHHHHhHHHHHHHhcChH
Q psy9584 59 DVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKD-YELASSLLGVGVDYANISNAQY 137 (466)
Q Consensus 59 d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D-~~~A~~~L~~g~~~A~~~~d~~ 137 (466)
.--.+++..++.+|...|.+..|...++++|++.-++ +..++.+|.++...|+ +..|++.+++++.+.- ..
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~----~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P----~~ 165 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAAN----YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP----KN 165 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT----TC
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC----HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCC----CC
Confidence 3457889999999999999999999999999988643 3445568888888895 9999999999887533 11
Q ss_pred HHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHH
Q psy9584 138 TRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILT 217 (466)
Q Consensus 138 ~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~ 217 (466)
..+....|.++.. .|. +.+.+..|-+++++
T Consensus 166 ----------------------~~a~~~~g~~~~~-~g~--~~eAl~~~~kal~l------------------------- 195 (382)
T 2h6f_A 166 ----------------------YQVWHHRRVLVEW-LRD--PSQELEFIADILNQ------------------------- 195 (382)
T ss_dssp ----------------------HHHHHHHHHHHHH-HTC--CTTHHHHHHHHHHH-------------------------
T ss_pred ----------------------HHHHHHHHHHHHH-ccC--HHHHHHHHHHHHHh-------------------------
Confidence 1222333333333 233 44555555554432
Q ss_pred hcCCCCCCCCccCCCCCCcccccCcchhHHHHHHHHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCC
Q psy9584 218 IMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGK 297 (466)
Q Consensus 218 i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvyl~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~ 297 (466)
.|. + ..+..|+|.+|.+.+
T Consensus 196 --dP~-------------------------------------------------------~----~~a~~~lg~~~~~~g 214 (382)
T 2h6f_A 196 --DAK-------------------------------------------------------N----YHAWQHRQWVIQEFK 214 (382)
T ss_dssp --CTT-------------------------------------------------------C----HHHHHHHHHHHHHHT
T ss_pred --Ccc-------------------------------------------------------C----HHHHHHHHHHHHHcC
Confidence 221 1 234578888888866
Q ss_pred -Cc-h-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhh-hhcHHHH-----HHHHHHHHHhhhhhhhhhHHHhHHHH
Q psy9584 298 -RE-G-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFF-QARYNEA-----KRYLRETLKMANAEDLNRLTSCSLVL 368 (466)
Q Consensus 298 -~~-~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~-~~~~~eA-----k~~lre~lk~a~~~~l~~l~~~~l~l 368 (466)
.+ + ++++.+-+++|... +....+ |.+ ... .+++++| ..++++++++..... .++..
T Consensus 215 ~~~eAl~~~~~al~l~P~~~-~a~~~l-g~~-------l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~------~a~~~ 279 (382)
T 2h6f_A 215 LWDNELQYVDQLLKEDVRNN-SVWNQR-YFV-------ISNTTGYNDRAVLEREVQYTLEMIKLVPHNE------SAWNY 279 (382)
T ss_dssp CCTTHHHHHHHHHHHCTTCH-HHHHHH-HHH-------HHHTTCSCSHHHHHHHHHHHHHHHHHSTTCH------HHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCH-HHHHHH-HHH-------HHHhcCcchHHHHHHHHHHHHHHHHHCCCCH------HHHHH
Confidence 32 3 46666666777422 122222 333 133 4454666 588999988765432 36778
Q ss_pred HHHHHHhcC--ChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcC
Q psy9584 369 LGHIFLSLG--NHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILN 417 (466)
Q Consensus 369 lg~i~l~~~--~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g 417 (466)
+|.++...| ++.+|.+.+... +..||. .|+...|.++|...|
T Consensus 280 l~~ll~~~g~~~~~~a~~~~~~~----~~~p~~---~~al~~La~~~~~~~ 323 (382)
T 2h6f_A 280 LKGILQDRGLSKYPNLLNQLLDL----QPSHSS---PYLIAFLVDIYEDML 323 (382)
T ss_dssp HHHHHTTTCGGGCHHHHHHHHHH----TTTCCC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHccCccchHHHHHHHHHh----ccCCCC---HHHHHHHHHHHHHHh
Confidence 888888877 678888777553 556664 677788888888875
No 75
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.97 E-value=0.0012 Score=63.97 Aligned_cols=84 Identities=11% Similarity=0.008 Sum_probs=63.3
Q ss_pred HhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhc
Q psy9584 32 THTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHA 111 (466)
Q Consensus 32 ~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~ 111 (466)
+|..|+..|...+++. ...-++-..++..++++.|...|++..+...++. . +.+.+ ..+..+|..+.
T Consensus 10 ~~~g~y~~ai~~~~~~------~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~----~-~~~~~--~a~~~la~~~~ 76 (291)
T 3mkr_A 10 FYIGSYQQCINEAQRV------KPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKP----S-SAPEL--QAVRMFAEYLA 76 (291)
T ss_dssp HHTTCHHHHHHHHHHS------CCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCT----T-SCHHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc------ccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhcc----c-CChhH--HHHHHHHHHHc
Confidence 6788888888888763 2334567788999999999999988777764543 1 33333 45556899999
Q ss_pred ccccHHHHHHHHHhHHH
Q psy9584 112 GEKDYELASSLLGVGVD 128 (466)
Q Consensus 112 ~~~D~~~A~~~L~~g~~ 128 (466)
..++++.|++.++..+.
T Consensus 77 ~~~~~~~A~~~l~~ll~ 93 (291)
T 3mkr_A 77 SHSRRDAIVAELDREMS 93 (291)
T ss_dssp CSTTHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHh
Confidence 99999999999887654
No 76
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.93 E-value=9.8e-05 Score=62.61 Aligned_cols=94 Identities=9% Similarity=0.087 Sum_probs=77.7
Q ss_pred hHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHH-HHHHH
Q psy9584 330 GLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL-WASAI 408 (466)
Q Consensus 330 ~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~ql-w~~~l 408 (466)
|...+.+|+|++|..+|++++++.... +.++.-+|.+|+..|++++|.+....++.+..+.+.....+ .+..-
T Consensus 15 G~~~~~~~~~~~A~~~y~~Al~~~p~~------~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 15 GNAAYKQKDFEKAHVHYDKAIELDPSN------ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHH
Confidence 444488999999999999999975543 44678899999999999999999999999998876654443 35566
Q ss_pred HHHHHHHcCCchHHHHHHHHH
Q psy9584 409 LKDLYKILNDPVRENEALQMH 429 (466)
Q Consensus 409 L~~ly~~~g~~~~~~e~~~~~ 429 (466)
+..+|...|++++|.++++.-
T Consensus 89 lg~~~~~~~~~~~A~~~~~ka 109 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAVQWFHRS 109 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 889999999999999887654
No 77
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.91 E-value=0.00052 Score=62.51 Aligned_cols=134 Identities=12% Similarity=0.021 Sum_probs=92.9
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.+++..+++... ++..+|.+ +....+.++|..++++++.+... ...+...+|.+|...|.+..+
T Consensus 26 A~~~~~~al~~~~~~~~~--~~~~~~~~-~~~~~~~~~A~~~~~~al~~~p~-------~~~~~~~l~~~~~~~~~~~~A 95 (228)
T 4i17_A 26 AFEKYSEYLKLTNNQDSV--TAYNCGVC-ADNIKKYKEAADYFDIAIKKNYN-------LANAYIGKSAAYRDMKNNQEY 95 (228)
T ss_dssp HHHHHHHHHHHTTTCCHH--HHHHHHHH-HHHTTCHHHHHHHHHHHHHTTCS-------HHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhccCCCCcH--HHHHHHHH-HHHhhcHHHHHHHHHHHHHhCcc-------hHHHHHHHHHHHHHcccHHHH
Confidence 677887777666533333 44446665 34577888899999888764222 345677889999999988888
Q ss_pred hHHHHHHHHhhchhhhh---HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcCh--HHHHHHHHHHHHH
Q psy9584 82 KPILRRAIELSQHSIYW---HCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQ--YTRVLFLLSRCML 149 (466)
Q Consensus 82 k~~l~k~i~~s~~~~~W---~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~--~~~~lf~ls~~~~ 149 (466)
...++++++.....+.. ....++.+|.++...|+++.|++.++++++. +.. ...++..++.+..
T Consensus 96 ~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----~p~~~~~~~~~~l~~~~~ 164 (228)
T 4i17_A 96 IATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV----TSKKWKTDALYSLGVLFY 164 (228)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS----SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc----CCCcccHHHHHHHHHHHH
Confidence 88888888887644322 2345677888888889999998888887765 233 3556666665553
No 78
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.91 E-value=0.00066 Score=59.56 Aligned_cols=154 Identities=14% Similarity=0.164 Sum_probs=108.1
Q ss_pred HHHHHHHHhhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCcccccc
Q psy9584 248 VVVYLVTVIGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHS 318 (466)
Q Consensus 248 aLvyl~tv~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~ 318 (466)
+...++.+ +..+|++.. +|++.. |+. .-+..++|.+|...++.. +....+....|..
T Consensus 7 iy~~lG~~------~~~~g~~~~A~~~~~~al~~~--p~~-~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~----- 72 (184)
T 3vtx_A 7 IYMDIGDK------KRTKGDFDGAIRAYKKVLKAD--PNN-VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS----- 72 (184)
T ss_dssp HHHHHHHH------HHHHTCHHHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC-----
T ss_pred HHHHHHHH------HHHcCCHHHHHHHHHHHHHhC--CCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh-----
Confidence 34455555 777887755 355552 322 346788999999987443 2444444455532
Q ss_pred chhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCC
Q psy9584 319 HSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPD 398 (466)
Q Consensus 319 ~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D 398 (466)
..+.+..|......+++.+|...+.+++++.... ..++..+|.++...|++++|.+....++.+- |+
T Consensus 73 ----~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~------~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~---p~ 139 (184)
T 3vtx_A 73 ----AEAYYILGSANFMIDEKQAAIDALQRAIALNTVY------ADAYYKLGLVYDSMGEHDKAIEAYEKTISIK---PG 139 (184)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT
T ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHhCCchhHHHHHHHHHHhc---ch
Confidence 1222445555688999999999999999865443 2356789999999999999999999998874 33
Q ss_pred hhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 399 VHVQLWASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 399 ~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
. ..+...+..+|...|++++|.+.++.-..
T Consensus 140 ~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 140 F---IRAYQSIGLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred h---hhHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 2 34456688999999999999888776544
No 79
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.91 E-value=0.00026 Score=63.43 Aligned_cols=135 Identities=7% Similarity=0.018 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHH
Q psy9584 283 TFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLT 362 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~ 362 (466)
+....++|.+|...++-.+....+++.-+. . +.+++..|...+..|++.+|.+++++++++....
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~---~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~------ 70 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQDP---H------SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL------ 70 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSSC---C------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcCC---C------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------
Confidence 456789999999987555444444443221 1 2233555666688999999999999999975432
Q ss_pred HhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCC----------ChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 363 SCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIP----------DVHVQLWASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 363 ~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~----------D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
..++..+|.++...|++++|.+....++.+..+.+ .......+...+..+|...|++++|.++++.-...
T Consensus 71 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 71 AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 45788999999999999999999999999887655 22223455567889999999999999988776554
No 80
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.89 E-value=0.00092 Score=60.35 Aligned_cols=180 Identities=15% Similarity=0.191 Sum_probs=119.2
Q ss_pred CcchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccc
Q psy9584 1 MCIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNL 80 (466)
Q Consensus 1 ~ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ 80 (466)
.|+.+++.+++..+.. +.++..+|.+++ ...+.++|..++++++.+... ...+...+|.+|...|.+..
T Consensus 41 ~A~~~~~~~l~~~~~~---~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~-------~~~~~~~la~~~~~~~~~~~ 109 (243)
T 2q7f_A 41 KAAEAFTKAIEENKED---AIPYINFANLLS-SVNELERALAFYDKALELDSS-------AATAYYGAGNVYVVKEMYKE 109 (243)
T ss_dssp -CCTTHHHHHTTCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhCccc---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHhccHHH
Confidence 3678888888755532 456777887754 578899999999998876322 24678889999999999999
Q ss_pred hhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHH
Q psy9584 81 SKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAV 160 (466)
Q Consensus 81 ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~ 160 (466)
+...++++++..... ...++.+|.++...||++.|++.++++.+... ++ ..+++.++.+.... .+.++..
T Consensus 110 A~~~~~~~~~~~~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--~~--~~~~~~l~~~~~~~--~~~~~A~ 179 (243)
T 2q7f_A 110 AKDMFEKALRAGMEN----GDLFYMLGTVLVKLEQPKLALPYLQRAVELNE--ND--TEARFQFGMCLANE--GMLDEAL 179 (243)
T ss_dssp HHHHHHHHHHHTCCS----HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT--TC--HHHHHHHHHHHHHH--TCCHHHH
T ss_pred HHHHHHHHHHhCCCC----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--cc--HHHHHHHHHHHHHc--CCHHHHH
Confidence 999999999987544 23456789999999999999999999887643 22 33445554444333 2233333
Q ss_pred HHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHH
Q psy9584 161 QLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQ 212 (466)
Q Consensus 161 ~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq 212 (466)
..+.++-...+ . ...+++.. .-.+...|+...+...+++.-
T Consensus 180 ~~~~~~~~~~~---~------~~~~~~~l--a~~~~~~~~~~~A~~~~~~~~ 220 (243)
T 2q7f_A 180 SQFAAVTEQDP---G------HADAFYNA--GVTYAYKENREKALEMLDKAI 220 (243)
T ss_dssp HHHHHHHHHCT---T------CHHHHHHH--HHHHHHTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHhCc---c------cHHHHHHH--HHHHHHccCHHHHHHHHHHHH
Confidence 33333322221 1 12233332 234466788888887776653
No 81
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.88 E-value=0.0021 Score=54.75 Aligned_cols=128 Identities=16% Similarity=0.137 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhh
Q psy9584 283 TFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLN 359 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~ 359 (466)
..+..++|.+|...++.. ++++.+-++.|... .+.+..|...+..+++.+|.++++++++.....
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~---------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--- 109 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNV---------KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN--- 109 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH---------HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh---
Confidence 457788999999977433 34444444555321 112333444478999999999999999875432
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
...+..+|.++...|++++|.+....++... |+. .++...+..+|...|++++|.++++....
T Consensus 110 ---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~---~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 110 ---FNVRFRLGVALDNLGRFDEAIDSFKIALGLR---PNE---GKVHRAIAFSYEQMGRHEEALPHFKKANE 172 (186)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC---ccc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3467789999999999999999999998875 332 35567788999999999999887765543
No 82
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.87 E-value=0.0003 Score=61.20 Aligned_cols=110 Identities=15% Similarity=0.069 Sum_probs=92.2
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH 94 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~ 94 (466)
.+...+..+..+|.+++ ...+.++|..++++++.+... . ..++..+|.+|...|++..+...+++++++...
T Consensus 6 ~~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~---~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 77 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPA---N----PIYLSNRAAAYSASGQHEKAAEDAELATVVDPK 77 (164)
T ss_dssp SCCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCc---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 34567888999998865 578999999999999887432 2 468899999999999999999999999999865
Q ss_pred hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcCh
Q psy9584 95 SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQ 136 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~ 136 (466)
+ ...++.+|.++...||+..|++.+++++.+.-...+.
T Consensus 78 ~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 78 Y----SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 4 4556789999999999999999999999998755443
No 83
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.83 E-value=0.00069 Score=59.43 Aligned_cols=113 Identities=14% Similarity=0.124 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhH
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWH 99 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~ 99 (466)
+.+++.+|.+++ ...+.++|..++++++.+- |.+ ..+...||.+|...|.+..+...+.+++......
T Consensus 5 ~~iy~~lG~~~~-~~g~~~~A~~~~~~al~~~---p~~----~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~---- 72 (184)
T 3vtx_A 5 TTIYMDIGDKKR-TKGDFDGAIRAYKKVLKAD---PNN----VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS---- 72 (184)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHC---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC----
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhC---CCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh----
Confidence 456788888854 4678999999999988763 223 3577888999999999888888888888877544
Q ss_pred HHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHH
Q psy9584 100 CRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCM 148 (466)
Q Consensus 100 ~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~ 148 (466)
......++.++...+++..|.+.++.+..... ....+.+.++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~----~~~~~~~~lg~~~ 117 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNT----VYADAYYKLGLVY 117 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc----cchHHHHHHHHHH
Confidence 23344678888888999999888888766533 2334455554444
No 84
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.82 E-value=0.00069 Score=57.52 Aligned_cols=104 Identities=16% Similarity=0.007 Sum_probs=86.4
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchh
Q psy9584 16 PRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHS 95 (466)
Q Consensus 16 p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~ 95 (466)
..-.+.....+|..++ ...+.+.|..++++++.+... . ..+...+|.+|...|.++.+...++++++.....
T Consensus 9 ~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~~~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 80 (166)
T 1a17_A 9 ALKRAEELKTQANDYF-KAKDYENAIKFYSQAIELNPS---N----AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY 80 (166)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCC---C----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 3457888889998854 578999999999999876332 2 5678899999999999999999999999987544
Q ss_pred hhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 96 IYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 96 ~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
...++.+|.++...|++..|++.++++++...
T Consensus 81 ----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 81 ----IKGYYRRAASNMALGKFRAALRDYETVVKVKP 112 (166)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred ----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 34567889999999999999999999987754
No 85
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.81 E-value=0.00088 Score=57.23 Aligned_cols=137 Identities=9% Similarity=0.058 Sum_probs=96.9
Q ss_pred cchhhHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhh
Q psy9584 277 QERELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAE 356 (466)
Q Consensus 277 ~~~~~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~ 356 (466)
++++....+..++|.+|...++..+....+++.-... +.. ..+++..|...+..|++++|..+++++++.....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 75 (186)
T 3as5_A 2 GNDDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDAD-AFD-----VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN 75 (186)
T ss_dssp --CCHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTT-SCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CccchhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-ccC-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 3566677788999999999775555555554433210 111 2223444555578999999999999999875432
Q ss_pred hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 357 DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 357 ~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
..++..+|.++...|++++|.+....+....... ......+..+|...|++++|.++++.-..
T Consensus 76 ------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 138 (186)
T 3as5_A 76 ------VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN------FNVRFRLGVALDNLGRFDEAIDSFKIALG 138 (186)
T ss_dssp ------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh------HHHHHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 3457789999999999999999999998874332 23345678899999999999887765443
No 86
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.79 E-value=0.00073 Score=57.36 Aligned_cols=137 Identities=12% Similarity=-0.002 Sum_probs=97.1
Q ss_pred hhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhh
Q psy9584 280 ELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAE 356 (466)
Q Consensus 280 ~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~ 356 (466)
...+....++|.+|...++-. ++++.+-++.|.. +.+.+..|...+..+++.+|..++++++++....
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 80 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY 80 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 345567899999999977433 3444444456542 1222334444578999999999999999975432
Q ss_pred hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Q psy9584 357 DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQM 435 (466)
Q Consensus 357 ~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s~~ 435 (466)
..++..+|.++...|++++|.+....++.+..+.++ .|...-+...+...|++++|.+.+.....+.+.
T Consensus 81 ------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 81 ------IKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKD----AKMKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp ------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 346789999999999999999999999987554333 444444445577789999998888776555544
No 87
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.77 E-value=0.00069 Score=54.68 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchh---
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHS--- 95 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~--- 95 (466)
.+.+...+|.++ ....+.+.|..++++++.+... . ..+...+|.+|...|.+..+...++++++.....
T Consensus 3 ~~~~~~~l~~~~-~~~~~~~~A~~~~~~a~~~~~~---~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 74 (131)
T 1elr_A 3 QALKEKELGNDA-YKKKDFDTALKHYDKAKELDPT---N----MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED 74 (131)
T ss_dssp HHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCc---c----HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh
Confidence 467788899875 4578999999999999876322 2 4678899999999999999999999999987532
Q ss_pred hhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 96 IYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 96 ~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
.......++.+|.++...||+..|++.++.+.+..
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 12225567789999999999999999999998864
No 88
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.00038 Score=57.56 Aligned_cols=102 Identities=14% Similarity=-0.004 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
++..+..+|..++ ...+.++|..++++++.+... . ..+...+|.+|...|.+..+...++++++...+.
T Consensus 3 ~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 71 (126)
T 3upv_A 3 KAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPE---D----ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF--- 71 (126)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred hHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCC---C----hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc---
Confidence 5677888897754 578899999999999887433 2 3788999999999999999999999999987544
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYANI 132 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~ 132 (466)
...++.+|.++...|+++.|++.+++++.+...
T Consensus 72 -~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 104 (126)
T 3upv_A 72 -VRAYIRKATAQIAVKEYASALETLDAARTKDAE 104 (126)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcc
Confidence 456678999999999999999999999998854
No 89
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.74 E-value=0.00022 Score=79.11 Aligned_cols=127 Identities=14% Similarity=0.083 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhCCCc--h-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhh
Q psy9584 283 TFANLNLAIVYLRGKRE--G-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLN 359 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~~~--~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~ 359 (466)
+-++.|||.+|...|+- + ++++.+-+++|.. +....+| |.+ ...+|++++|..+|++++++....
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-~~a~~nL-g~~-------l~~~g~~~eA~~~~~~Al~l~P~~--- 76 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-AAAHSNL-ASV-------LQQQGKLQEALMHYKEAIRISPTF--- 76 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHH-HHH-------HHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHH-HHH-------HHHcCCHHHHHHHHHHHHHhCCCC---
Confidence 45789999999998843 3 3666666678752 2222333 433 378999999999999999976543
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
+.++..+|.++...|++++|.+....|+.+.-+. ..+..-|..+|...|++++|.++++.-.
T Consensus 77 ---~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~------~~a~~~Lg~~~~~~g~~~eAi~~~~~Al 138 (723)
T 4gyw_A 77 ---ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF------ADAHSNLASIHKDSGNIPEAIASYRTAL 138 (723)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4578899999999999999999999999885443 3355678899999999999998776543
No 90
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.72 E-value=0.00092 Score=53.91 Aligned_cols=100 Identities=8% Similarity=0.055 Sum_probs=78.3
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC-CChhHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKI-PDVHVQLWA 405 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~-~D~~~qlw~ 405 (466)
+-.|...+..+++.+|..++.++++..... ..++..+|.++...|++++|.+....++.+.... ++......+
T Consensus 8 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 8 KELGNDAYKKKDFDTALKHYDKAKELDPTN------MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCcc------HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 445555688999999999999999875432 3567789999999999999999999999998775 444433556
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 406 SAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 406 ~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
...+..+|...|++++|.++++.-...
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 677889999999999998877665443
No 91
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.71 E-value=0.0023 Score=59.65 Aligned_cols=159 Identities=13% Similarity=-0.022 Sum_probs=104.7
Q ss_pred HHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHH
Q psy9584 262 FGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQ 332 (466)
Q Consensus 262 Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~ 332 (466)
++..|++.. ++++...+.....-+..++|.+|...++-. +.++.+-++.|..- .. ..++|..|..
T Consensus 25 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~-----~~-~~a~~~lg~~ 98 (261)
T 3qky_A 25 FYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP-----RV-PQAEYERAMC 98 (261)
T ss_dssp HHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT-----TH-HHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc-----hh-HHHHHHHHHH
Confidence 667777755 244443333445678899999999987433 35555555666421 11 2233555555
Q ss_pred Hhh--------hhcHHHHHHHHHHHHHhhhhhhhhhH-----------HHhHHHHHHHHHHhcCChHHHHHhhHHHHHHh
Q psy9584 333 SFF--------QARYNEAKRYLRETLKMANAEDLNRL-----------TSCSLVLLGHIFLSLGNHRESMNMVTPAMQLA 393 (466)
Q Consensus 333 ~~~--------~~~~~eAk~~lre~lk~a~~~~l~~l-----------~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lA 393 (466)
.+. ++++.+|.++++++++.......... .+.....+|.+|+..|++++|.+....++...
T Consensus 99 ~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 178 (261)
T 3qky_A 99 YYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY 178 (261)
T ss_dssp HHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 567 99999999999999997654432111 11223789999999999999999999998765
Q ss_pred hcCCChhHHHHHHHHHHHHHHHc----------CCchHHHHHHHHH
Q psy9584 394 SKIPDVHVQLWASAILKDLYKIL----------NDPVRENEALQMH 429 (466)
Q Consensus 394 kK~~D~~~qlw~~~lL~~ly~~~----------g~~~~~~e~~~~~ 429 (466)
.+.+. ..-+...+..+|... |++++|.+.++.-
T Consensus 179 p~~~~---~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~ 221 (261)
T 3qky_A 179 PDTPW---ADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERL 221 (261)
T ss_dssp TTSTT---HHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHH
T ss_pred CCCch---HHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHH
Confidence 54443 234455666777766 6667776665543
No 92
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.70 E-value=0.00088 Score=60.97 Aligned_cols=133 Identities=11% Similarity=0.060 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhCCCc--h-HHHHHHhhhCC-CccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhh
Q psy9584 284 FANLNLAIVYLRGKRE--G-DFAALLERINP-ETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLN 359 (466)
Q Consensus 284 ~~~lNlai~Yl~~~~~--~-e~~~~l~~i~~-~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~ 359 (466)
-...++|.+|...++- + ++++.+-++.| ... .+.|-.|...+..+++.+|.++++++++....
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---- 74 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS---------VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN---- 74 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH---------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS----
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc---------HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc----
Confidence 4678899999997743 3 35555555665 221 12233555568899999999999999986544
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHH-HHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL-WASAILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~ql-w~~~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
...++..+|.++...|++++|.+....++.+..+.++....+ .+...+..+|...|++++|.+.++.-..
T Consensus 75 --~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 145 (228)
T 4i17_A 75 --LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATD 145 (228)
T ss_dssp --HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred --hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHh
Confidence 345688999999999999999999999998866554332222 3456778899999999999887765433
No 93
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.70 E-value=0.00016 Score=62.95 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=77.4
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
||.+++.+++ .+.-...+++.+|+++ ....+.+.|..++++++.+-.. . ..++..||.+|...|.+..+
T Consensus 16 ai~~~~~a~~---~~p~~~~~~~~la~~y-~~~~~~~~A~~~~~~al~~~p~---~----~~a~~~lg~~~~~~~~~~~A 84 (150)
T 4ga2_A 16 YIASVQGSTP---SPRQKSIKGFYFAKLY-YEAKEYDLAKKYICTYINVQER---D----PKAHRFLGLLYELEENTDKA 84 (150)
T ss_dssp HHHHHHHHSC---SHHHHHTTHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhcc---cCcccHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCC---C----HHHHHHHHHHHHHcCchHHH
Confidence 3444444443 2334455677788774 4467888888888888776322 2 45778888888888888888
Q ss_pred hHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHH-HHHhHHHHHH
Q psy9584 82 KPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASS-LLGVGVDYAN 131 (466)
Q Consensus 82 k~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~-~L~~g~~~A~ 131 (466)
...+++++++..+. ...++.+|.++...|++..|.+ ++++++++.-
T Consensus 85 ~~~~~~al~~~p~~----~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 85 VECYRRSVELNPTQ----KDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP 131 (150)
T ss_dssp HHHHHHHHHHCTTC----HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST
T ss_pred HHHHHHHHHhCCCC----HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc
Confidence 88888888877544 2345677888888888765554 4577666543
No 94
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.68 E-value=0.00045 Score=58.53 Aligned_cols=100 Identities=12% Similarity=-0.005 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
.|..+...|..++ ...+.++|..++++|+.+... . ..++..+|.+|...|.+..+...++++|++..++
T Consensus 12 ~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~---~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--- 80 (126)
T 4gco_A 12 LAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPE---N----AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF--- 80 (126)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCC---C----HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh---
Confidence 4778888998855 567899999999999876332 2 4678899999999999999999999999987654
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
...++.+|.++...|+++.|++.+++++++.
T Consensus 81 -~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 81 -IKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -hHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 3456789999999999999999999998874
No 95
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.67 E-value=0.00077 Score=58.47 Aligned_cols=109 Identities=12% Similarity=0.056 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcccc-----------chHHHHHHHHHHHHHHHHhCCccchhHHHH
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINA-----------FDDVKFEAASVLAELYETQLLSNLSKPILR 86 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~-----------~~d~K~~a~slLa~~y~~~~~~~~ak~~l~ 86 (466)
-.|......|..++ ...+.+.|..++++|+.++..... .......+++.+|.||...|.+..+...++
T Consensus 9 ~~a~~~~~~G~~~~-~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 87 (162)
T 3rkv_A 9 KSVEALRQKGNELF-VQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSS 87 (162)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 45777888888764 568899999999999997544211 145677899999999999999999999999
Q ss_pred HHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 87 RAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 87 k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
++|++..++ ...++.+|.++...|+++.|++.+++++.+.-
T Consensus 88 ~al~~~p~~----~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p 128 (162)
T 3rkv_A 88 EVLKREETN----EKALFRRAKARIAAWKLDEAEEDLKLLLRNHP 128 (162)
T ss_dssp HHHHHSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred HHHhcCCcc----hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCC
Confidence 999987544 45677899999999999999999999988843
No 96
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.66 E-value=0.00098 Score=58.29 Aligned_cols=118 Identities=18% Similarity=0.170 Sum_probs=93.2
Q ss_pred CcchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH-HHHhCCc-
Q psy9584 1 MCIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAEL-YETQLLS- 78 (466)
Q Consensus 1 ~ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~-y~~~~~~- 78 (466)
.|+.+++.+++..+.. +.++..+|.++ ....+.+.|..++++++.+... . ..+...+|.+ |...|.+
T Consensus 28 ~A~~~~~~al~~~p~~---~~~~~~lg~~~-~~~~~~~~A~~~~~~al~~~p~---~----~~~~~~la~~l~~~~~~~~ 96 (177)
T 2e2e_A 28 AQLQALQDKIRANPQN---SEQWALLGEYY-LWQNDYSNSLLAYRQALQLRGE---N----AELYAALATVLYYQASQHM 96 (177)
T ss_dssp CCCHHHHHHHHHCCSC---HHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHCS---C----HHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHhCCCc---HHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCC---C----HHHHHHHHHHHHHhcCCcc
Confidence 3778888888665522 35778888875 4578999999999999887433 2 3577889999 8889988
Q ss_pred -cchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHh
Q psy9584 79 -NLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANIS 133 (466)
Q Consensus 79 -~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~ 133 (466)
..+...++++++...+. ...++.+|.++...||++.|++.++.+++.....
T Consensus 97 ~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 97 TAQTRAMIDKALALDSNE----ITALMLLASDAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp CHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred hHHHHHHHHHHHHhCCCc----HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 88999999999987544 2455678999999999999999999998876543
No 97
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.65 E-value=0.003 Score=50.54 Aligned_cols=124 Identities=22% Similarity=0.278 Sum_probs=86.8
Q ss_pred HHHHHHHHHHhCCCchH---HHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhH
Q psy9584 285 ANLNLAIVYLRGKREGD---FAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRL 361 (466)
Q Consensus 285 ~~lNlai~Yl~~~~~~e---~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l 361 (466)
+..++|.+|.+.++..+ +++.+-+..|.. ..+.+..|...+..+++.+|.++++++++.....
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~----- 68 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS----- 68 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc-----
Confidence 46788999999774333 333333444432 1122333444478899999999999999865432
Q ss_pred HHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q psy9584 362 TSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMH 429 (466)
Q Consensus 362 ~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~ 429 (466)
...+..+|.++...|++++|.+....+.....+.+ .+...+..+|...|++++|.+.+..-
T Consensus 69 -~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~ 129 (136)
T 2fo7_A 69 -AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA------EAWYNLGNAYYKQGDYDEAIEYYQKA 129 (136)
T ss_dssp -HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 34567899999999999999999999987653322 22345788999999999997776543
No 98
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.64 E-value=0.0021 Score=51.59 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=85.7
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchh
Q psy9584 16 PRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHS 95 (466)
Q Consensus 16 p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~ 95 (466)
+...+.++..+|.+++ ...+.+.|..++++++.+... . ..+...+|.+|...|.+..+...++++++.....
T Consensus 8 ~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 79 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQM-KVENFEAAVHFYGKAIELNPA---N----AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY 79 (131)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred chhhhHHHHHHHHHHH-HccCHHHHHHHHHHHHHcCCC---C----HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC
Confidence 4456788889998865 577899999999999876322 2 4678899999999999999999999999986544
Q ss_pred hhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 96 IYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 96 ~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
...++.+|.++...||++.|++.++.+.....
T Consensus 80 ----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p 111 (131)
T 2vyi_A 80 ----SKAYGRMGLALSSLNKHVEAVAYYKKALELDP 111 (131)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred ----HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc
Confidence 34557889999999999999999999988743
No 99
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.62 E-value=0.0011 Score=59.56 Aligned_cols=109 Identities=13% Similarity=0.091 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccch---------HHHHHHHHHHHHHHHHhCCccchhHHHHHH
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFD---------DVKFEAASVLAELYETQLLSNLSKPILRRA 88 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~---------d~K~~a~slLa~~y~~~~~~~~ak~~l~k~ 88 (466)
-++.....+|..+ ....+.++|..++++++.+....+.+. +++..++..+|.+|...|.+..+...++++
T Consensus 36 ~~~~~~~~~g~~~-~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 114 (198)
T 2fbn_A 36 QSAFDIKEEGNEF-FKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKV 114 (198)
T ss_dssp HHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3677888888875 457899999999999998766544222 235689999999999999999999999999
Q ss_pred HHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 89 IELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 89 i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
++..... ...++.+|.++...||+..|++.++.++.+.-
T Consensus 115 l~~~p~~----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 153 (198)
T 2fbn_A 115 LKIDKNN----VKALYKLGVANMYFGFLEEAKENLYKAASLNP 153 (198)
T ss_dssp HHHSTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred HHhCccc----HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC
Confidence 9987544 35667899999999999999999999987743
No 100
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.62 E-value=0.0048 Score=62.86 Aligned_cols=99 Identities=8% Similarity=-0.020 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCC-ccchhHHHHHHHHhhchhhhh
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLL-SNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~-~~~ak~~l~k~i~~s~~~~~W 98 (466)
+.++..+|.++ ....+.++|...+++++.+-.. + ..+.+.+|.+|...|. +..+...++++|++.-..
T Consensus 97 ~~a~~~lg~~~-~~~g~~~~Al~~~~~al~l~P~---~----~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~--- 165 (382)
T 2h6f_A 97 RDVYDYFRAVL-QRDERSERAFKLTRDAIELNAA---N----YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN--- 165 (382)
T ss_dssp HHHHHHHHHHH-HHTCCCHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHH-HHCCChHHHHHHHHHHHHhCcc---C----HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC---
Confidence 55566677664 5678899999999999886332 2 4688999999999996 999999999999988543
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
+..++.+|.++...|++..|+..+++++++.
T Consensus 166 -~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld 196 (382)
T 2h6f_A 166 -YQVWHHRRVLVEWLRDPSQELEFIADILNQD 196 (382)
T ss_dssp -HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 3445568888888999999999999988753
No 101
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.62 E-value=0.0024 Score=56.50 Aligned_cols=161 Identities=11% Similarity=-0.030 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHhhhhhHHHhcCchhh------HHhhhhcchhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCcc
Q psy9584 244 EHLYVVVYLVTVIGHLKFFGVTGTAGT------EVERLSQERELWTFANLNLAIVYLRGKREG---DFAALLERINPETL 314 (466)
Q Consensus 244 ~~l~aLvyl~tv~~~lk~Flv~G~~~~------eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~ 314 (466)
....++..+... +...|+... ++++.. ++. ..+..++|.+|...++.. ++++.+-++.|..
T Consensus 6 ~~~~~~~~~~~~------~~~~~~~~~A~~~~~~~~~~~--~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~- 75 (225)
T 2vq2_A 6 QVSNIKTQLAME------YMRGQDYRQATASIEDALKSD--PKN-ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS- 75 (225)
T ss_dssp HHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred ccHHHHHHHHHH------HHHHhhHHHHHHHHHHHHHhC--ccc-hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-
Confidence 344455555555 677777654 244432 221 446788899999977433 3444444455531
Q ss_pred ccccchhhHHHHHHHhHHHhhh-hcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHh
Q psy9584 315 TSHSHSLRAAAYYVQGLQSFFQ-ARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLA 393 (466)
Q Consensus 315 ~~~~~~L~a~~~yv~~~~~~~~-~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lA 393 (466)
+.+.+..|...+.. |++.+|.++++++++ .....-....+..+|.++...|++++|.+....++...
T Consensus 76 --------~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 143 (225)
T 2vq2_A 76 --------AEINNNYGWFLCGRLNRPAESMAYFDKALA----DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ 143 (225)
T ss_dssp --------HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT----STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred --------hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc----CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 12224455555788 999999999999998 11122234578899999999999999999999998764
Q ss_pred hcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 394 SKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 394 kK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
. +. ..+...+..+|...|++++|.+.++.....
T Consensus 144 ~---~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 144 P---QF---PPAFKELARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp T---TC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred C---CC---chHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3 32 334567888999999999998887765543
No 102
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.0014 Score=54.11 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=80.3
Q ss_pred HHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHH
Q psy9584 323 AAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQ 402 (466)
Q Consensus 323 a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~q 402 (466)
+...+..|...+.+++|.+|..++++++++.... ..++..+|.+++..|++++|.+....++.+....
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------ 71 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED------ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF------ 71 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc------
Confidence 3444567777799999999999999999976543 4678899999999999999999999999885332
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q psy9584 403 LWASAILKDLYKILNDPVRENEALQMHCNFS 433 (466)
Q Consensus 403 lw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s 433 (466)
..+...+..+|...|++++|.+.++.-....
T Consensus 72 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 72 VRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 3345668899999999999998887666554
No 103
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.59 E-value=0.0021 Score=53.10 Aligned_cols=102 Identities=21% Similarity=0.103 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
.+.+...+|..++ ...+.++|..++++++.+... . ..+...+|.+|...|.+..+...++++++...+.
T Consensus 8 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~---~----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~--- 76 (137)
T 3q49_B 8 SAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPL---V----AVYYTNRALCYLKMQQPEQALADCRRALELDGQS--- 76 (137)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred cHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcC---c----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh---
Confidence 4677888898754 678899999999999887432 2 4688999999999999999999999999987654
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYANI 132 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~ 132 (466)
...++.+|.++...|++..|++.++.+++....
T Consensus 77 -~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 77 -VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 346678999999999999999999999999875
No 104
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.56 E-value=0.00015 Score=63.10 Aligned_cols=53 Identities=9% Similarity=0.135 Sum_probs=25.4
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHH-hhHHHHHH
Q psy9584 334 FFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMN-MVTPAMQL 392 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~-~~~~a~~l 392 (466)
+..|++++|..++++++++.... ..++..+|.++...|++.+|.+ .+..|+.+
T Consensus 76 ~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~~~~~~aa~~~~~~al~l 129 (150)
T 4ga2_A 76 ELEENTDKAVECYRRSVELNPTQ------KDLVLKIAELLCKNDVTDGRAKYWVERAAKL 129 (150)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH
T ss_pred HHcCchHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 45555555555555555543322 1234455555555555544332 33444444
No 105
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.56 E-value=0.0014 Score=55.49 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=75.0
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
.-.|...|.+|+|.+|.+++++++++.... +.++..+|.+++..|++++|.+....++.+-.+. ..+.
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~ 84 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPEN------AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF------IKGY 84 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh------hHHH
Confidence 334555589999999999999999976543 4567899999999999999999999999874332 3345
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
..+..+|...|++++|.+.++.-..
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 6788999999999999888876544
No 106
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.54 E-value=0.0011 Score=52.29 Aligned_cols=100 Identities=16% Similarity=0.012 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
++..+..+|..++ ...+.++|..++++++.+... . ..+...+|.+|...|.+..+...++++++.....
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--- 71 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPH---N----HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW--- 71 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCC---c----HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc---
Confidence 4677888888754 578999999999999876332 2 4578899999999999999999999999987543
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
...++.+|.++...|++..|.+.++.+.+..
T Consensus 72 -~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 72 -GKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 3456678999999999999999999887653
No 107
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.53 E-value=0.0013 Score=52.72 Aligned_cols=98 Identities=20% Similarity=0.189 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHH
Q psy9584 22 THLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCR 101 (466)
Q Consensus 22 ~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~ 101 (466)
++..+|..++ ...+.++|..++++++..... . ..+...+|.+|...|.+..+...++++++..... ..
T Consensus 3 ~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~----~~ 70 (136)
T 2fo7_A 3 AWYNLGNAYY-KQGDYDEAIEYYQKALELDPR---S----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS----AE 70 (136)
T ss_dssp HHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC----HH
T ss_pred HHHHHHHHHH-HcCcHHHHHHHHHHHHHcCCc---c----hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc----hH
Confidence 4556666543 356778888888877654221 1 3456667888888887777777788777765433 22
Q ss_pred HHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 102 LIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 102 ~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
.++.+|.++...||+..|++.++.+.....
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 345677777778888888888887777654
No 108
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.53 E-value=0.0021 Score=55.72 Aligned_cols=119 Identities=8% Similarity=-0.088 Sum_probs=84.5
Q ss_pred chhhHHHHHHHHHHHHHhCCCc--h-HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhh
Q psy9584 278 ERELWTFANLNLAIVYLRGKRE--G-DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMAN 354 (466)
Q Consensus 278 ~~~~~~~~~lNlai~Yl~~~~~--~-e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~ 354 (466)
++...+-...++|.+|.+.++- + ++++.+-+++|.. +.+++-.|...+..+++.+|..++++++++..
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 76 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN---------PIYLSNRAAAYSASGQHEKAAEDAELATVVDP 76 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC---------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 3445566788899999997732 2 3555555566642 12223344444789999999999999999765
Q ss_pred hhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q psy9584 355 AEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKI 415 (466)
Q Consensus 355 ~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~ 415 (466)
.. ..++..+|.++...|++++|.+....++.+....++. |...-+..+.++
T Consensus 77 ~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~----~~~~~l~~~~~~ 127 (164)
T 3sz7_A 77 KY------SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSD----AMKRGLETTKRK 127 (164)
T ss_dssp TC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCH----HHHHHHHHHHHH
T ss_pred CC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHH----HHHHHHHHHHHH
Confidence 43 4577889999999999999999999999999888873 444444444433
No 109
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.52 E-value=0.0026 Score=67.28 Aligned_cols=121 Identities=7% Similarity=-0.022 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHHHHH------HhcCCHHHHHHHHHHHHHHHhccccch-HHHHHHHHHHHHHHHHhCCccchhHHHHHH
Q psy9584 16 PRVEARTHLQLGNILL------THTKNIDLARNHLEQAWHLSQSINAFD-DVKFEAASVLAELYETQLLSNLSKPILRRA 88 (466)
Q Consensus 16 p~~Ea~~rLrla~lL~------~~T~N~~~A~~hLeka~~L~~~~~~~~-d~K~~a~slLa~~y~~~~~~~~ak~~l~k~ 88 (466)
..-.++-.++.++-++ ..-.+.++|+..+++++.+.++.-+-+ -.-..+...||.+|..+|.+..|..+.+++
T Consensus 298 s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 377 (490)
T 3n71_A 298 SQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRM 377 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4445555566664333 345679999999999999877643222 257888999999999999999999999999
Q ss_pred HHhhc----hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHH-hcCh
Q psy9584 89 IELSQ----HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANI-SNAQ 136 (466)
Q Consensus 89 i~~s~----~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~-~~d~ 136 (466)
++... ....-+...++.||.+|..+|+|+.|..++++++++-.+ .|..
T Consensus 378 L~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 378 VDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 99986 233456778889999999999999999999999999887 4554
No 110
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.52 E-value=0.0014 Score=53.20 Aligned_cols=105 Identities=18% Similarity=0.034 Sum_probs=85.8
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH 94 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~ 94 (466)
++...+..+..+|.++ ....+.+.|..++++++.+... . ..+...+|.+|...|.+..+...++++++....
T Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~~~---~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 82 (133)
T 2lni_A 11 MNPDLALMVKNKGNEC-FQKGDYPQAMKHYTEAIKRNPK---D----AKLYSNRAACYTKLLEFQLALKDCEECIQLEPT 82 (133)
T ss_dssp SSSCHHHHHHHHHHHH-HHTTCSHHHHHHHHHHHTTCTT---C----HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT
T ss_pred cCcccHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCC---c----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 4556677888899875 4678899999999998765221 2 567889999999999999999999999998754
Q ss_pred hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 95 SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
. ...++.+|.++...||+..|++.++.+.....
T Consensus 83 ~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p 115 (133)
T 2lni_A 83 F----IKGYTRKAAALEAMKDYTKAMDVYQKALDLDS 115 (133)
T ss_dssp C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred c----hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC
Confidence 3 34567889999999999999999999987644
No 111
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.49 E-value=0.0024 Score=55.28 Aligned_cols=100 Identities=16% Similarity=0.102 Sum_probs=80.7
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhh------------hhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhh
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDL------------NRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLAS 394 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l------------~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAk 394 (466)
.-.|...+.+|+|.+|.++|++++++...... ....+..+..+|.+++..|++++|...+..++.+-
T Consensus 15 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~- 93 (162)
T 3rkv_A 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKRE- 93 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcC-
Confidence 44666668999999999999999998544321 55566788999999999999999999999999984
Q ss_pred cCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 395 KIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 395 K~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
|+. ..+.-.+..+|...|+++.|.+.++.-..+
T Consensus 94 --p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 94 --ETN---EKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp --TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --Ccc---hHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 442 456677889999999999999887765443
No 112
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.48 E-value=0.0019 Score=52.87 Aligned_cols=98 Identities=12% Similarity=0.080 Sum_probs=76.8
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
|-.|...+.+|++.+|.++++++++.... +.....++..+|.+++..|++++|.+....++......+. ...+.
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~---~~~~~ 79 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYPN---GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK---AAGGL 79 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSS---STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT---HHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCCC---CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc---cHHHH
Confidence 44566668999999999999999986543 2344567889999999999999999999999887655443 24455
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
-.+..+|...|++++|.+.++...
T Consensus 80 ~~la~~~~~~g~~~~A~~~~~~~~ 103 (129)
T 2xev_A 80 LKLGLSQYGEGKNTEAQQTLQQVA 103 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 667889999999999988776544
No 113
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.48 E-value=0.0025 Score=54.26 Aligned_cols=101 Identities=14% Similarity=-0.036 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
.+..+..+|..+ ....+.++|..++++++.+- |.. ..+...||.+|...|.+..+...++++++...+.+.
T Consensus 17 ~~~~~~~~a~~~-~~~g~~~~A~~~~~~al~~~---p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~- 87 (142)
T 2xcb_A 17 TLEQLYALGFNQ-YQAGKWDDAQKIFQALCMLD---HYD----ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPR- 87 (142)
T ss_dssp HHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHC---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH-
T ss_pred HHHHHHHHHHHH-HHHccHHHHHHHHHHHHHhC---Ccc----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH-
Confidence 355677888765 45789999999999998752 222 356788999999999999999999999999865533
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
.++.+|.++...||++.|++.++.++++.-
T Consensus 88 ---~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 88 ---FPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp ---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 446789999999999999999999998876
No 114
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.47 E-value=0.0023 Score=55.58 Aligned_cols=101 Identities=11% Similarity=-0.062 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
.+.++..+|..+ ....+.++|..++++++.+... . ..+...||.+|...|.+..|...+++++++..+.+
T Consensus 20 ~~~~~~~~g~~~-~~~g~~~~A~~~~~~al~~~p~---~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~-- 89 (148)
T 2vgx_A 20 TLEQLYSLAFNQ-YQSGXYEDAHXVFQALCVLDHY---D----SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP-- 89 (148)
T ss_dssp HHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT--
T ss_pred hHHHHHHHHHHH-HHcCChHHHHHHHHHHHHcCcc---c----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc--
Confidence 355677788775 4568899999999999876322 2 35667899999999999999999999999986553
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
..++.+|.++...|+++.|++.+++++++.-
T Consensus 90 --~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 90 --RFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred --hHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 3456789999999999999999999998876
No 115
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.47 E-value=0.00059 Score=61.09 Aligned_cols=117 Identities=17% Similarity=0.252 Sum_probs=88.5
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.++ +| .+.++..+|.++ ....+.++|..++++++.+... . ..+...+|.+|...|.+..+
T Consensus 25 A~~~~~~a~----~~--~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~~~~~---~----~~~~~~lg~~~~~~~~~~~A 90 (213)
T 1hh8_A 25 ALDAFSAVQ----DP--HSRICFNIGCMY-TILKNMTEAEKAFTRSINRDKH---L----AVAYFQRGMLYYQTEKYDLA 90 (213)
T ss_dssp HHHHHHTSS----SC--CHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHc----CC--ChHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCcc---c----hHHHHHHHHHHHHcccHHHH
Confidence 455565553 22 346888888875 4577899999999999876322 2 46788999999999999999
Q ss_pred hHHHHHHHHhhchh------------hhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHH
Q psy9584 82 KPILRRAIELSQHS------------IYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANI 132 (466)
Q Consensus 82 k~~l~k~i~~s~~~------------~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~ 132 (466)
...++++++..... .......++.+|.++...||++.|++.++.++.+...
T Consensus 91 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 91 IKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp HHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 99999999876532 2334567778899999999999999999988877553
No 116
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.45 E-value=0.0011 Score=54.20 Aligned_cols=102 Identities=14% Similarity=-0.038 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHH
Q psy9584 23 HLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRL 102 (466)
Q Consensus 23 rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~ 102 (466)
++.+|..+ ....+.++|..++++++..-. -......+...+|.+|...|+++.+...++++++...+.+ +....
T Consensus 5 ~~~~a~~~-~~~~~~~~A~~~~~~~~~~~p----~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~-~~~~~ 78 (129)
T 2xev_A 5 AYNVAFDA-LKNGKYDDASQLFLSFLELYP----NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD-KAAGG 78 (129)
T ss_dssp HHHHHHHH-HHTTCHHHHHHHHHHHHHHCS----SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST-THHHH
T ss_pred HHHHHHHH-HHhCCHHHHHHHHHHHHHHCC----CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCc-ccHHH
Confidence 45667664 457899999999999876522 2223447889999999999999999999999999875442 23456
Q ss_pred HHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 103 IFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 103 ~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
++.+|.++...||++.|++.++..+...
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 7789999999999999999999988754
No 117
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.45 E-value=0.0033 Score=50.94 Aligned_cols=119 Identities=10% Similarity=0.012 Sum_probs=82.6
Q ss_pred hhhHHHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhh
Q psy9584 279 RELWTFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA 355 (466)
Q Consensus 279 ~~~~~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~ 355 (466)
.........++|.+|.+.++-. ++++.+-++.|.. +.+.+..|...+..+++.+|.++++++++....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 82 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------AKLYSNRAACYTKLLEFQLALKDCEECIQLEPT 82 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 3455677889999999977433 3444444455532 122234455558899999999999999997543
Q ss_pred hhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCC
Q psy9584 356 EDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILND 418 (466)
Q Consensus 356 ~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~ 418 (466)
...++..+|.++...|++++|.+....++.+....++ +...+.++|...|+
T Consensus 83 ------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~------~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 83 ------FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKE------AADGYQRCMMAQYN 133 (133)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTH------HHHHHHHHHHHHTC
T ss_pred ------chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchH------HHHHHHHHHHHhcC
Confidence 2346788999999999999999999999987654433 33456666666654
No 118
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.43 E-value=0.0018 Score=51.50 Aligned_cols=103 Identities=20% Similarity=0.201 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchh
Q psy9584 16 PRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHS 95 (466)
Q Consensus 16 p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~ 95 (466)
|...+.++..+|.++ ....+.+.|..++++++..... . ..+...+|.+|...|.+..+...++++++.....
T Consensus 5 ~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~---~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 76 (125)
T 1na0_A 5 PGNSAEAWYNLGNAY-YKQGDYDEAIEYYQKALELDPN---N----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (125)
T ss_dssp --CHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred ccccHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHCcC---c----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc
Confidence 445678888899874 4578999999999999875321 2 3577899999999999999999999999886543
Q ss_pred hhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 96 IYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 96 ~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
...++.+|.++...||+..|++.++.+....
T Consensus 77 ----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 77 ----AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 2345678999999999999999999988764
No 119
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.42 E-value=0.0019 Score=68.31 Aligned_cols=140 Identities=11% Similarity=-0.035 Sum_probs=100.7
Q ss_pred HHHHHHHHHhCCC--chH-HHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhh--hhhh
Q psy9584 286 NLNLAIVYLRGKR--EGD-FAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAE--DLNR 360 (466)
Q Consensus 286 ~lNlai~Yl~~~~--~~e-~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~--~l~~ 360 (466)
.++.+.-+..+|+ +++ +++..-.+....+...+... +....--|.....+|+|.+|..+++++|.+-... ...-
T Consensus 312 ~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~-a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 312 TLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYV-LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 3566666777774 232 33333223333332222222 2111111222267999999999999999987766 5677
Q ss_pred HHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC--CChhHHHHHHHHHHHHHHHcCCchHHHHHH
Q psy9584 361 LTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKI--PDVHVQLWASAILKDLYKILNDPVRENEAL 426 (466)
Q Consensus 361 l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~--~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~ 426 (466)
-++.++.-||.+|..+|++++|+.+...|+.+-.+. +|++...-...+|...+..+|.+++|..-|
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~ 458 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMY 458 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999986 777777778899999999999988886544
No 120
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.42 E-value=0.0019 Score=67.88 Aligned_cols=132 Identities=14% Similarity=0.070 Sum_probs=92.0
Q ss_pred CcchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccc
Q psy9584 1 MCIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNL 80 (466)
Q Consensus 1 ~ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ 80 (466)
.|+.+++.+++..+.. +.++..+|.+++ ...+.++|..++++++.+... . ..+...||.+|...|++..
T Consensus 7 ~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~---~----~~~~~~lg~~~~~~g~~~~ 75 (568)
T 2vsy_A 7 RELLQLRAAVRHRPQD---FVAWLMLADAEL-GMGDTTAGEMAVQRGLALHPG---H----PEAVARLGRVRWTQQRHAE 75 (568)
T ss_dssp --------------CC---HHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTSTT---C----HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCC---C----HHHHHHHHHHHHHCCCHHH
Confidence 3677887777655422 357888888765 468999999999999775322 2 5678899999999999999
Q ss_pred hhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHh
Q psy9584 81 SKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLL 151 (466)
Q Consensus 81 ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll 151 (466)
|...++++++..... ...++.+|.++...|+++.|++.++++++... ++ ..++..++.++..+
T Consensus 76 A~~~~~~al~~~p~~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p--~~--~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 76 AAVLLQQASDAAPEH----PGIALWLGHALEDAGQAEAAAAAYTRAHQLLP--EE--PYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TC--HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC--HHHHHHHHHHHHHh
Confidence 999999999987654 34567899999999999999999999988744 22 35566666666554
No 121
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.38 E-value=0.0017 Score=59.72 Aligned_cols=143 Identities=10% Similarity=0.011 Sum_probs=98.0
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH-------
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYET------- 74 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~------- 74 (466)
|+.+++.+++..|....-..+++.+|.++ ....+.++|...+++++.+-.. ... .-.+.+.+|.+|..
T Consensus 23 A~~~~~~~~~~~p~~~~~~~a~~~lg~~~-~~~~~~~~A~~~~~~~l~~~P~---~~~-~~~a~~~~g~~~~~~~~~~~~ 97 (225)
T 2yhc_A 23 AITQLEALDNRYPFGPYSQQVQLDLIYAY-YKNADLPLAQAAIDRFIRLNPT---HPN-IDYVMYMRGLTNMALDDSALQ 97 (225)
T ss_dssp HHHHHHHHHHHCTTSTTHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---CTT-HHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHCcC---CCc-HHHHHHHHHHHHHhhhhhhhh
Confidence 78899988876664444456788889775 4578999999999998775322 211 23577888888886
Q ss_pred -----------hCCccchhHHHHHHHHhhch-hhhhHHH------------HHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 75 -----------QLLSNLSKPILRRAIELSQH-SIYWHCR------------LIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 75 -----------~~~~~~ak~~l~k~i~~s~~-~~~W~~~------------~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
.|.+..|...+++.++...+ ...|... ..+.+|.++...|++..|+..++..++..
T Consensus 98 ~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~ 177 (225)
T 2yhc_A 98 GFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY 177 (225)
T ss_dssp ----------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred hhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC
Confidence 35677788888888887642 2233222 12567889999999999999999988765
Q ss_pred HHhcCh-HHHHHHHHHHHHHHh
Q psy9584 131 NISNAQ-YTRVLFLLSRCMLLL 151 (466)
Q Consensus 131 ~~~~d~-~~~~lf~ls~~~~ll 151 (466)
- +++ .-++++.+..+...+
T Consensus 178 p--~~~~~~~a~~~l~~~~~~~ 197 (225)
T 2yhc_A 178 P--DTQATRDALPLMENAYRQM 197 (225)
T ss_dssp T--TSHHHHHHHHHHHHHHHHT
T ss_pred c--CCCccHHHHHHHHHHHHHc
Confidence 4 233 224555555554433
No 122
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.37 E-value=0.042 Score=53.05 Aligned_cols=122 Identities=16% Similarity=0.101 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhCCCchH---HHHHHhhhCCCccccccchh-hHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhh
Q psy9584 285 ANLNLAIVYLRGKREGD---FAALLERINPETLTSHSHSL-RAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNR 360 (466)
Q Consensus 285 ~~lNlai~Yl~~~~~~e---~~~~l~~i~~~~~~~~~~~L-~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~ 360 (466)
+..++|.+|.+.|+..+ .++.+.++.|... ...+ .+ |+. .....+++.+|...++++++....
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~---~~~l~~a---~~~--l~~~~~~~~eA~~~~~~~l~~~p~----- 198 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKMQDQDEDAT---LTQLATA---WVS--LAAGGEKLQDAYYIFQEMADKCSP----- 198 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHH---HHH--HHHCTTHHHHHHHHHHHHHHHSCC-----
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH---HHHHHHH---HHH--HHhCchHHHHHHHHHHHHHHhCCC-----
Confidence 67788999999886543 4444444565421 0111 12 111 112468999999999999986332
Q ss_pred HHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHH-HHHH
Q psy9584 361 LTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRE-NEAL 426 (466)
Q Consensus 361 l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~-~e~~ 426 (466)
....+..+|.++...|++++|+.....++.+...-++ .|.. +..++...|++..+ .+++
T Consensus 199 -~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~----~l~~--l~~~~~~~g~~~eaa~~~~ 258 (291)
T 3mkr_A 199 -TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPE----TLIN--LVVLSQHLGKPPEVTNRYL 258 (291)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHH--HHHHHHHTTCCHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHH--HHHHHHHcCCCHHHHHHHH
Confidence 2456778999999999999999999999987654444 2333 34567789988764 3443
No 123
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.37 E-value=0.0013 Score=58.18 Aligned_cols=101 Identities=12% Similarity=0.032 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
.+.++..+|..+ ....+.++|..++++++.+-.. . ..+...||.+|...|.+..|...+++++++..+.+
T Consensus 35 ~~~~~~~lg~~~-~~~g~~~eA~~~~~~al~~~P~---~----~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~-- 104 (151)
T 3gyz_A 35 MMDDIYSYAYDF-YNKGRIEEAEVFFRFLCIYDFY---N----VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY-- 104 (151)
T ss_dssp HHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC--
T ss_pred HHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCC---C----HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc--
Confidence 345678888764 5688999999999999887322 2 34788999999999999999999999999987553
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
..++.+|.++...|+++.|++.+++++.++.
T Consensus 105 --~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~ 135 (151)
T 3gyz_A 105 --TPVFHTGQCQLRLKAPLKAKECFELVIQHSN 135 (151)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3556899999999999999999999998763
No 124
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.00086 Score=53.29 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=71.7
Q ss_pred HHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHH
Q psy9584 326 YYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWA 405 (466)
Q Consensus 326 ~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~ 405 (466)
.+-.|...+.++++.+|.+++++++++.... ..++..+|.+++..|++++|.+....++.+....++......+
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 80 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQN------PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHH
Confidence 3445666689999999999999999976543 4567899999999999999999999999988777666554555
Q ss_pred HHHHHHHHHHcCCchHH
Q psy9584 406 SAILKDLYKILNDPVRE 422 (466)
Q Consensus 406 ~~lL~~ly~~~g~~~~~ 422 (466)
...+..++...|+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~a 97 (111)
T 2l6j_A 81 QYRLELAQGAVGSVQIP 97 (111)
T ss_dssp HHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHhHhhh
Confidence 55666777777766554
No 125
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.34 E-value=0.0033 Score=49.51 Aligned_cols=94 Identities=9% Similarity=0.036 Sum_probs=73.6
Q ss_pred HHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHH
Q psy9584 325 AYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLW 404 (466)
Q Consensus 325 ~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw 404 (466)
..+-.|...+..+++.+|.++++++++..... ..++..+|.++...|++++|.+....++.+.... ..
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~ 73 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHN------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW------GK 73 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc------HH
Confidence 33555666688999999999999999875432 3467889999999999999999999998874332 23
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 405 ASAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 405 ~~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
+...+..+|...|++++|.++++...
T Consensus 74 ~~~~~a~~~~~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 74 GYSRKAAALEFLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 44567788999999999988776543
No 126
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.34 E-value=0.0026 Score=52.53 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=78.4
Q ss_pred HHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHH
Q psy9584 324 AAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403 (466)
Q Consensus 324 ~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~ql 403 (466)
..++..|...+..+++.+|..+++++++..... ..++..+|.++...|++++|.+....++.+.... .
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~------~ 77 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLV------AVYYTNRALCYLKMQQPEQALADCRRALELDGQS------V 77 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------H
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh------H
Confidence 334556666789999999999999999976542 4578899999999999999999999999875432 2
Q ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q psy9584 404 WASAILKDLYKILNDPVRENEALQMHCNFS 433 (466)
Q Consensus 404 w~~~lL~~ly~~~g~~~~~~e~~~~~~~~s 433 (466)
.+...+..+|...|++++|.+.++.-....
T Consensus 78 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 78 KAHFFLGQCQLEMESYDEAIANLQRAYSLA 107 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHC
Confidence 345568889999999999988887666554
No 127
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.34 E-value=0.0013 Score=52.96 Aligned_cols=83 Identities=11% Similarity=0.106 Sum_probs=67.1
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
|.-|...+.+|++.+|.+++++++++..... .++..+|.+|...|++++|.+....++.++.+.+|. +..
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~----~~~ 80 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVETDPDYV------GTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ----KDL 80 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH----HHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch----hHH
Confidence 4455555889999999999999999765432 278899999999999999999999999999999994 455
Q ss_pred HHHHHHHHHcCCc
Q psy9584 407 AILKDLYKILNDP 419 (466)
Q Consensus 407 ~lL~~ly~~~g~~ 419 (466)
.-+..++...|+.
T Consensus 81 ~~l~~~l~~~~~~ 93 (100)
T 3ma5_A 81 SELQDAKLKAEGL 93 (100)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHcccc
Confidence 5556666665554
No 128
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.32 E-value=0.0027 Score=52.63 Aligned_cols=106 Identities=14% Similarity=-0.036 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhh
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSI 96 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~ 96 (466)
...+...+.+|..+ ....+.+.|..++++++.+. + -.+....+...+|.+|...|++..+...++++++.....
T Consensus 25 ~~~~~~~~~~a~~~-~~~~~~~~A~~~~~~a~~~~---~-~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~- 98 (148)
T 2dba_A 25 ASSVEQLRKEGNEL-FKCGDYGGALAAYTQALGLD---A-TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD- 98 (148)
T ss_dssp CCCHHHHHHHHHHH-HTTTCHHHHHHHHHHHHTSC---C-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-
T ss_pred hHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHc---c-cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-
Confidence 35678888999874 46788999999999987642 2 334568899999999999999999999999999987544
Q ss_pred hhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 97 YWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 97 ~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
...++.+|.++...||+..|++.++.++....
T Consensus 99 ---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 130 (148)
T 2dba_A 99 ---VKALYRRSQALEKLGRLDQAVLDLQRCVSLEP 130 (148)
T ss_dssp ---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS
T ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 34556789999999999999999999887643
No 129
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.005 Score=64.26 Aligned_cols=121 Identities=14% Similarity=-0.016 Sum_probs=98.9
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc-
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ- 93 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~- 93 (466)
.....||...+||+++.. ..+.++|-..|..-..-+.. ..-...|.+.+...+++|...+++..++.+++++.....
T Consensus 132 lE~erarl~~~La~i~e~-~g~~~eA~~iL~~l~~Et~~-~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~ 209 (445)
T 4b4t_P 132 VEVERARVTKDLVEIKKE-EGKIDEAADILCELQVETYG-SMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFK 209 (445)
T ss_dssp CCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHCS-SSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcc
Confidence 455689999999998655 58899999999886554333 223468999999999999999999999999999754332
Q ss_pred --hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChH
Q psy9584 94 --HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQY 137 (466)
Q Consensus 94 --~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~ 137 (466)
..+.-..+++.+.|.+|..++||..|.+.+...++.....+|+.
T Consensus 210 ~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~~d~~ 255 (445)
T 4b4t_P 210 NPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEA 255 (445)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHSCHH
T ss_pred cCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccccCCHH
Confidence 34566677888899999999999999999999999999888874
No 130
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.31 E-value=0.00071 Score=56.77 Aligned_cols=104 Identities=19% Similarity=0.077 Sum_probs=82.6
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH 94 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~ 94 (466)
.|.......+.+|..++ ...+.++|...+++++.+-.. . .++...||.+|...|.+..+...+++++++.-+
T Consensus 12 ~p~~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~P~---~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 12 NPYMYHENPMEEGLSML-KLANLAEAALAFEAVCQKEPE---R----EEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CGGGGCSCHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CccccchhHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCC---C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 45444455677887755 467899999999999876322 2 468889999999999999999999999999865
Q ss_pred hhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 95 SIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
.+ ..++.||.++...|++..|++.++.+++..
T Consensus 84 ~~----~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 84 DI----AVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp CH----HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 43 345689999999999999999999887654
No 131
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.30 E-value=0.0018 Score=59.66 Aligned_cols=125 Identities=6% Similarity=-0.077 Sum_probs=91.0
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHh-----------------cCCHHHHHHHHHHHHHHHhccccchHHH---
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTH-----------------TKNIDLARNHLEQAWHLSQSINAFDDVK--- 61 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~-----------------T~N~~~A~~hLeka~~L~~~~~~~~d~K--- 61 (466)
||.+++.+++..|....-..++..+|.+++.- ..+.++|...+++++..-.......+.+
T Consensus 60 A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l 139 (225)
T 2yhc_A 60 AQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRL 139 (225)
T ss_dssp HHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHH
Confidence 78889888876663222234677888876542 4679999999999866432222111221
Q ss_pred -------HHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHH
Q psy9584 62 -------FEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGV 127 (466)
Q Consensus 62 -------~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~ 127 (466)
-+....+|++|...|.+..+...+++.++...+. .+.-..++.+|.++...|+++.|++.++...
T Consensus 140 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~-~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~ 211 (225)
T 2yhc_A 140 VFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT-QATRDALPLMENAYRQMQMNAQAEKVAKIIA 211 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC-CccHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 1233678999999999999999999999988654 3455788899999999999999999887544
No 132
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.30 E-value=0.0042 Score=64.71 Aligned_cols=121 Identities=7% Similarity=-0.051 Sum_probs=94.6
Q ss_pred ChhHHHHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHhccccch-HHHHHHHHHHHHHHHHhCCccchhHHHHH
Q psy9584 15 PPRVEARTHLQLGNILLTHT------KNIDLARNHLEQAWHLSQSINAFD-DVKFEAASVLAELYETQLLSNLSKPILRR 87 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T------~N~~~A~~hLeka~~L~~~~~~~~-d~K~~a~slLa~~y~~~~~~~~ak~~l~k 87 (466)
|...+++..++.++-+++.- .+.++|+..+++++.+.++.-+=+ -....+...||.+|..+|.|..|..+.++
T Consensus 286 ~~~e~v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~ 365 (433)
T 3qww_A 286 PQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQK 365 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 44445555566665544432 257999999999999766542222 25678889999999999999999999999
Q ss_pred HHHhhc----hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHH-hcC
Q psy9584 88 AIELSQ----HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANI-SNA 135 (466)
Q Consensus 88 ~i~~s~----~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~-~~d 135 (466)
+++... ....-+...++.||.+|..+|+|+.|+.++++++++-.+ .|.
T Consensus 366 aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~ 418 (433)
T 3qww_A 366 IIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGK 418 (433)
T ss_dssp HHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCC
Confidence 999986 333556777889999999999999999999999999987 344
No 133
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.30 E-value=0.0018 Score=64.22 Aligned_cols=108 Identities=11% Similarity=0.059 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcccc--------chHHHHHHHHHHHHHHHHhCCccchhHHHHHHH
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINA--------FDDVKFEAASVLAELYETQLLSNLSKPILRRAI 89 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~--------~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i 89 (466)
..+.++..+|.+++ ...+.++|..++++|+.+...... ....+..++..||.+|...|.+..|...+++++
T Consensus 145 ~~a~~~~~~g~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 223 (336)
T 1p5q_A 145 EQSTIVKERGTVYF-KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKAL 223 (336)
T ss_dssp HHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35778888998865 578899999999999998654321 234567899999999999999999999999999
Q ss_pred HhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 90 ELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 90 ~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
++.... ...++.+|.++...|+++.|++.+++++.+.
T Consensus 224 ~~~p~~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 224 ELDSNN----EKGLSRRGEAHLAVNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HhCCCc----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 998654 3566789999999999999999999988774
No 134
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.29 E-value=0.006 Score=63.26 Aligned_cols=172 Identities=15% Similarity=0.059 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhh
Q psy9584 18 VEARTHLQLGNILLTHTKNI-DLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSI 96 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~-~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~ 96 (466)
..+.++..+|.+++. ..+. ++|..++++++.+... . .++...||.+|...|++..|...++++++...+
T Consensus 100 ~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p~---~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-- 169 (474)
T 4abn_A 100 VEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEPE---L----VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-- 169 (474)
T ss_dssp CCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC--
T ss_pred hhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCCC---C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--
Confidence 457788899988654 5677 9999999999886322 2 458899999999999999999999999998744
Q ss_pred hhHHHHHHHHHHHhccc---------ccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHh---cccCccHHHHHHH
Q psy9584 97 YWHCRLIFQLAQIHAGE---------KDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLL---IDKKVNDAVQLLT 164 (466)
Q Consensus 97 ~W~~~~~fqLA~i~~~~---------~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll---~~~~~~~v~~al~ 164 (466)
...++.+|.++... |+++.|++.+++++++.-. + ..+++.++.++..+ ...+.+..+.++.
T Consensus 170 ---~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~--~--~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~ 242 (474)
T 4abn_A 170 ---KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL--D--GRSWYILGNAYLSLYFNTGQNPKISQQALS 242 (474)
T ss_dssp ---HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT--C--HHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC--C--HHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence 26677899999999 9999999999999887542 2 34556666665533 1112233344444
Q ss_pred HHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHH
Q psy9584 165 QAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQL 211 (466)
Q Consensus 165 ~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqL 211 (466)
...+..+.-. ........++.. -..+...|+...+...+++.
T Consensus 243 ~~~~al~~~p---~~~~~~~~~~~l--g~~~~~~g~~~~A~~~~~~a 284 (474)
T 4abn_A 243 AYAQAEKVDR---KASSNPDLHLNR--ATLHKYEESYGEALEGFSQA 284 (474)
T ss_dssp HHHHHHHHCG---GGGGCHHHHHHH--HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCC---CcccCHHHHHHH--HHHHHHcCCHHHHHHHHHHH
Confidence 3333333211 011122333332 22344567777776666544
No 135
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.28 E-value=0.0061 Score=48.75 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=61.6
Q ss_pred HHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHH
Q psy9584 326 YYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWA 405 (466)
Q Consensus 326 ~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~ 405 (466)
++..|...+..+++.+|..+++++++..... ..++..+|.++...|++++|.+....++.+. |+. .++
T Consensus 15 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~---~~~---~~~ 82 (131)
T 2vyi_A 15 LKTEGNEQMKVENFEAAVHFYGKAIELNPAN------AVYFCNRAAAYSKLGNYAGAVQDCERAICID---PAY---SKA 82 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC---HHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhhchHHHHHHHHHHHhcC---ccC---HHH
Confidence 3445555577778888888888877754332 3456677888888888888888877777653 222 234
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 406 SAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 406 ~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
...+..+|...|++++|.++++.-.
T Consensus 83 ~~~~~~~~~~~~~~~~A~~~~~~~~ 107 (131)
T 2vyi_A 83 YGRMGLALSSLNKHVEAVAYYKKAL 107 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4556677778888887776665443
No 136
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.27 E-value=0.014 Score=52.80 Aligned_cols=118 Identities=14% Similarity=0.005 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccc-----cchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHh
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSIN-----AFDDVKFEAASVLAELYETQLLSNLSKPILRRAIEL 91 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~-----~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~ 91 (466)
.-+|-..+..|..++. ..++++|...+++|+.+....+ ........+++.+|.++...|.+..+....+++|++
T Consensus 8 ~~~a~~~~~~G~~l~~-~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLV-AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 4577888999998775 5799999999999999866522 122234569999999999999999999999999998
Q ss_pred -------hchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcC
Q psy9584 92 -------SQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNA 135 (466)
Q Consensus 92 -------s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d 135 (466)
-.++......-+|.+|.++..-|+++.|++.+++++++.-....
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~ 137 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG 137 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH
Confidence 54443333445588999999999999999999999999875443
No 137
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.25 E-value=0.0081 Score=54.62 Aligned_cols=113 Identities=11% Similarity=0.010 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHH----------------HHHHHHHhCCccchhHH
Q psy9584 21 RTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASV----------------LAELYETQLLSNLSKPI 84 (466)
Q Consensus 21 ~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~sl----------------La~~y~~~~~~~~ak~~ 84 (466)
...++.|..++ ...+.++|..++++++.+-.. .. ++.+. ||.+|...|.+..|...
T Consensus 5 ~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~---~~----~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 76 (208)
T 3urz_A 5 DEMLQKVSAAI-EAGQNGQAVSYFRQTIALNID---RT----EMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLF 76 (208)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCHH---HH----HHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCC---Ch----HHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHH
Confidence 44566776654 567899999999999876222 22 34445 99999999999999999
Q ss_pred HHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHH
Q psy9584 85 LRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCML 149 (466)
Q Consensus 85 l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ 149 (466)
++++++...+. ...++.+|.++...|++..|++.+++++++.- ....+++.++.++.
T Consensus 77 ~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P----~~~~a~~~lg~~~~ 133 (208)
T 3urz_A 77 YKELLQKAPNN----VDCLEACAEMQVCRGQEKDALRMYEKILQLEA----DNLAANIFLGNYYY 133 (208)
T ss_dssp HHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC----CCHHHHHHHHHHHH
Confidence 99999998654 35567899999999999999999999988744 22345555555543
No 138
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.24 E-value=0.0033 Score=55.53 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=79.4
Q ss_pred HHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHH
Q psy9584 325 AYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLW 404 (466)
Q Consensus 325 ~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw 404 (466)
+.|-.|...+.+|+|++|.+++++++++.... ..++..+|.++...|++++|.+....++.+.-..++
T Consensus 38 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~------ 105 (151)
T 3gyz_A 38 DIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN------VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT------ 105 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH------
Confidence 34667788899999999999999999976543 336778999999999999999999999999876665
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 405 ASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 405 ~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
+..-+..+|...|+++.|.++++.-...
T Consensus 106 ~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 106 PVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3345788999999999999888765544
No 139
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.21 E-value=0.0044 Score=53.74 Aligned_cols=94 Identities=10% Similarity=0.120 Sum_probs=73.3
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
|-.|...+.+|++.+|..+++++++..... ..++..+|.++...|++++|.+....++.+....++ +.
T Consensus 25 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~------~~ 92 (148)
T 2vgx_A 25 YSLAFNQYQSGXYEDAHXVFQALCVLDHYD------SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPR------FP 92 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH------HH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHcCccc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCch------HH
Confidence 556666788999999999999998865443 345668899999999999999999999888655444 23
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
.-+..+|...|++++|.+.++.-...
T Consensus 93 ~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 93 FHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45678889999999998887765544
No 140
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.20 E-value=0.0047 Score=52.45 Aligned_cols=95 Identities=12% Similarity=0.159 Sum_probs=76.0
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
|-.|...+.+|++.+|.++++++++..... ...+..+|.++...|++++|.+....++.+....++ +.
T Consensus 22 ~~~a~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~------~~ 89 (142)
T 2xcb_A 22 YALGFNQYQAGKWDDAQKIFQALCMLDHYD------ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPR------FP 89 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH------HH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH------HH
Confidence 556777789999999999999999865432 345678999999999999999999999998655444 23
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMHCNFS 433 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~~~~s 433 (466)
..+..+|...|++++|.+.++.-....
T Consensus 90 ~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 90 FHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 457788999999999998887665543
No 141
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.20 E-value=0.0052 Score=50.85 Aligned_cols=101 Identities=12% Similarity=0.009 Sum_probs=79.0
Q ss_pred HHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHH
Q psy9584 323 AAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQ 402 (466)
Q Consensus 323 a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~q 402 (466)
+...+..|...+..+++.+|.++++++++..... .....++..+|.++...|++++|.+....++.+.. +.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---~~--- 98 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATP---QDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG---GD--- 98 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS---CC---
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc---hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc---cC---
Confidence 3444667777799999999999999999976543 33467788999999999999999999999998743 32
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 403 LWASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 403 lw~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
..+...+..+|...|++++|.++++.-...
T Consensus 99 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 99 VKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 233456778899999999998877655443
No 142
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.19 E-value=0.0015 Score=54.70 Aligned_cols=91 Identities=14% Similarity=-0.014 Sum_probs=74.4
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
|..|...+..|++.+|...++++++..... +.++..+|.++...|++++|......++.+.-..+ .+.
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~------~~~ 88 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQKEPER------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI------AVH 88 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHH
Confidence 566777789999999999999999976543 45678999999999999999999999988854432 244
Q ss_pred HHHHHHHHHcCCchHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMH 429 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~ 429 (466)
..|..+|...|++++|.+.++..
T Consensus 89 ~~la~~~~~~g~~~~A~~~~~~a 111 (121)
T 1hxi_A 89 AALAVSHTNEHNANAALASLRAW 111 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 56788999999999998777643
No 143
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.19 E-value=0.0047 Score=55.25 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=78.5
Q ss_pred HHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhh----------hhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHH
Q psy9584 323 AAAYYVQGLQSFFQARYNEAKRYLRETLKMANAED----------LNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQL 392 (466)
Q Consensus 323 a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~----------l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~l 392 (466)
+...+-.|...+.+++|.+|.+++++++++..... ...+...++..+|.+++..|++++|.+....++.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 33334566666889999999999999998654432 23344577889999999999999999999999987
Q ss_pred hhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 393 ASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 393 AkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
. |+. ..+...+..+|...|++++|.++++.-..+
T Consensus 118 ~---p~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 118 D---KNN---VKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp S---TTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred C---ccc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 4 332 345566788899999999998877765444
No 144
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.18 E-value=0.0039 Score=64.58 Aligned_cols=109 Identities=10% Similarity=-0.001 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcccc--------chHHHHHHHHHHHHHHHHhCCccchhHHHHHHH
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINA--------FDDVKFEAASVLAELYETQLLSNLSKPILRRAI 89 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~--------~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i 89 (466)
..+..+..+|..++. ..+.++|..++++|+.+....+. ....+..+++.+|.||.+.|.+..|...+++++
T Consensus 266 ~~a~~~~~~G~~~~~-~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 344 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFK-GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKAL 344 (457)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 357788889988665 78899999999999998655321 234668999999999999999999999999999
Q ss_pred HhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 90 ELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 90 ~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
++..++ ...++.+|.++...|||..|+..+++++.+.-
T Consensus 345 ~~~p~~----~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P 382 (457)
T 1kt0_A 345 GLDSAN----EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 382 (457)
T ss_dssp HHSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-
T ss_pred hcCCcc----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 998654 45677899999999999999999999887643
No 145
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.16 E-value=0.0029 Score=65.88 Aligned_cols=102 Identities=12% Similarity=-0.023 Sum_probs=88.4
Q ss_pred hhhcHHHHHHHHHHHHHhhhhh--hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC--CChhHHHHHHHHHH
Q psy9584 335 FQARYNEAKRYLRETLKMANAE--DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKI--PDVHVQLWASAILK 410 (466)
Q Consensus 335 ~~~~~~eAk~~lre~lk~a~~~--~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~--~D~~~qlw~~~lL~ 410 (466)
..|+|+||...++++|++.... +.+-.++.++..||.+|..+|++++|+.+...++.+-.+. +|++....+..=|.
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 4578999999999999987765 5567788999999999999999999999999999999885 56777788888999
Q ss_pred HHHHHcCCchHHHHHHHHHHHHHHHH
Q psy9584 411 DLYKILNDPVRENEALQMHCNFSQML 436 (466)
Q Consensus 411 ~ly~~~g~~~~~~e~~~~~~~~s~~l 436 (466)
.+|..+|++++|...++--..+-+..
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999988777666665544
No 146
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.15 E-value=0.0049 Score=62.25 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccc---------cchHHHHHHHHHHHHHHHHhCCccchhHHHHHH
Q psy9584 18 VEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSIN---------AFDDVKFEAASVLAELYETQLLSNLSKPILRRA 88 (466)
Q Consensus 18 ~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~---------~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~ 88 (466)
..+..+..+|..++ ...+.++|..++++|+.+....+ ........++..+|.+|.+.|++..|...++++
T Consensus 221 ~~a~~~~~~g~~~~-~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 299 (370)
T 1ihg_A 221 LISEDLKNIGNTFF-KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 45677888888754 56789999999999998655421 144567889999999999999999999999999
Q ss_pred HHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 89 IELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 89 i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
++..... ...++.+|.++...||++.|++.|++++++.-
T Consensus 300 l~~~p~~----~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P 338 (370)
T 1ihg_A 300 LEIDPSN----TKALYRRAQGWQGLKEYDQALADLKKAQEIAP 338 (370)
T ss_dssp HTTCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHhCchh----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 9987544 45667899999999999999999999988754
No 147
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.13 E-value=0.0017 Score=53.38 Aligned_cols=96 Identities=14% Similarity=-0.039 Sum_probs=74.8
Q ss_pred cCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhccc
Q psy9584 34 TKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGE 113 (466)
Q Consensus 34 T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~ 113 (466)
..+.++|..++++++.+. . -+.-...+...||.+|...|.+..+...++++++...+. ...++.+|.++...
T Consensus 3 ~g~~~~A~~~~~~al~~~---~-~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~l~~~~~~~ 74 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASG---L-QGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH----QALRVFYAMVLYNL 74 (117)
T ss_dssp ----CCCHHHHHHHHSSC---C-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcC---C-CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----hHHHHHHHHHHHHc
Confidence 356788999999987641 0 133456789999999999999999999999999998655 44667789999999
Q ss_pred ccHHHHHHHHHhHHHHHHHhcChHHH
Q psy9584 114 KDYELASSLLGVGVDYANISNAQYTR 139 (466)
Q Consensus 114 ~D~~~A~~~L~~g~~~A~~~~d~~~~ 139 (466)
|++..|++.+++++.... +++.+.
T Consensus 75 g~~~~A~~~~~~al~~~p--~~~~~~ 98 (117)
T 3k9i_A 75 GRYEQGVELLLKIIAETS--DDETIQ 98 (117)
T ss_dssp TCHHHHHHHHHHHHHHHC--CCHHHH
T ss_pred CCHHHHHHHHHHHHHhCC--CcHHHH
Confidence 999999999999987754 555443
No 148
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.08 E-value=0.0022 Score=51.62 Aligned_cols=71 Identities=11% Similarity=0.071 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChH
Q psy9584 63 EAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQY 137 (466)
Q Consensus 63 ~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~ 137 (466)
.+.+.||.+|...|.+..|...++++++.....+ ..++.+|.++...|+++.|++.++++++++...++..
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 78 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYV----GTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQK 78 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchh
Confidence 5678899999999999999999999999886543 2566799999999999999999999999999888873
No 149
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.07 E-value=0.0024 Score=50.02 Aligned_cols=88 Identities=13% Similarity=0.148 Sum_probs=69.5
Q ss_pred HHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHH
Q psy9584 331 LQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILK 410 (466)
Q Consensus 331 ~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~ 410 (466)
...+.++++.+|..++++++++.... ..++..+|.++...|++++|.+....++.+..+..+ ..+...+.
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~~~l~ 83 (112)
T 2kck_A 14 VLQYDAGNYTESIDLFEKAIQLDPEE------SKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN----KDVWAAKA 83 (112)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC----HHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccch----HHHHHHHH
Confidence 33378999999999999999975432 346778999999999999999999999987544112 23446788
Q ss_pred HHHHHc-CCchHHHHHHHH
Q psy9584 411 DLYKIL-NDPVRENEALQM 428 (466)
Q Consensus 411 ~ly~~~-g~~~~~~e~~~~ 428 (466)
.+|... |++++|.+++..
T Consensus 84 ~~~~~~~~~~~~A~~~~~~ 102 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEAR 102 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHH
Confidence 999999 999999777654
No 150
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.06 E-value=0.25 Score=50.61 Aligned_cols=113 Identities=16% Similarity=0.106 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhCC----CchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhh
Q psy9584 283 TFANLNLAIVYLRGK----REGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDL 358 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~----~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l 358 (466)
..+..|||.+|..+. +..+....+++.- .+.+.....| |.+ |..|. -...++.+|.++++++.+..+
T Consensus 283 ~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa-~g~~~A~~~L-g~~-y~~G~--g~~~d~~~A~~~~~~Aa~~g~---- 353 (452)
T 3e4b_A 283 PRAELLLGKLYYEGKWVPADAKAAEAHFEKAV-GREVAADYYL-GQI-YRRGY--LGKVYPQKALDHLLTAARNGQ---- 353 (452)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHTTT-TTCHHHHHHH-HHH-HHTTT--TSSCCHHHHHHHHHHHHTTTC----
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHh-CCCHHHHHHH-HHH-HHCCC--CCCcCHHHHHHHHHHHHhhCh----
Confidence 457789999999752 1222333332222 3334444444 544 33332 134599999999999987443
Q ss_pred hhHHHhHHHHHHHHHHh----cCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHc
Q psy9584 359 NRLTSCSLVLLGHIFLS----LGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKIL 416 (466)
Q Consensus 359 ~~l~~~~l~llg~i~l~----~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~ 416 (466)
..+...||.+|.. .+|..+|......| -+.++. .+...|..+....
T Consensus 354 ----~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A----~~~g~~----~a~~~l~~l~~~~ 403 (452)
T 3e4b_A 354 ----NSADFAIAQLFSQGKGTKPDPLNAYVFSQLA----KAQDTP----EANDLATQLEAPL 403 (452)
T ss_dssp ----TTHHHHHHHHHHSCTTBCCCHHHHHHHHHHH----HTTCCH----HHHHHHHHHHTTC
T ss_pred ----HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH----HHCCCH----HHHHHHHHHHHhC
Confidence 3356788999985 45677777766554 445663 3555666665433
No 151
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.06 E-value=0.013 Score=46.42 Aligned_cols=93 Identities=23% Similarity=0.271 Sum_probs=69.4
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
+.-|...+..+++.+|.++++++++..... ..++..+|.++...|++++|.+....+.... |+. ..+.
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~---~~~---~~~~ 80 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYYQKALELDPNN------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD---PNN---AEAW 80 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC---HHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCcCc------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---Ccc---HHHH
Confidence 445555578899999999999998864322 3456788999999999999999998888764 322 2334
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMHCN 431 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~~~ 431 (466)
..+..+|...|++++|.++++.-..
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5678889999999999877665443
No 152
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.01 E-value=0.01 Score=62.38 Aligned_cols=129 Identities=20% Similarity=0.099 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhh
Q psy9584 283 TFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLN 359 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~ 359 (466)
..+..++|.+|.+.++-. ++++.+-+++|.. +.+++.-|.....+|++++|.+++++++++....
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--- 90 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGH---------PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEH--- 90 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC---
Confidence 356788999999977432 3555555566632 1122333444478899999999999999975543
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHc---CCchHHHHHHHHHHHH
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKIL---NDPVRENEALQMHCNF 432 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~---g~~~~~~e~~~~~~~~ 432 (466)
..++..+|.++...|++++|.+....++++....+ .+...+..+|... |++++|.+.++.....
T Consensus 91 ---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~------~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 91 ---PGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEP------YITAQLLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 44678899999999999999999999988854332 3445678889999 8998888877655443
No 153
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.94 E-value=0.0037 Score=48.92 Aligned_cols=95 Identities=8% Similarity=-0.153 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch--hhhhH
Q psy9584 22 THLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH--SIYWH 99 (466)
Q Consensus 22 ~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~--~~~W~ 99 (466)
++..+|.++ ....+.++|..++++++.+... . ..+...+|.+|...|.+..+...++++++.... .
T Consensus 8 ~~~~~~~~~-~~~~~~~~A~~~~~~a~~~~~~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~---- 75 (112)
T 2kck_A 8 EYYLEGVLQ-YDAGNYTESIDLFEKAIQLDPE---E----SKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN---- 75 (112)
T ss_dssp GGGGHHHHH-HSSCCHHHHHHHHHHHHHHCCC---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC----
T ss_pred HHHHHHHHH-HHhhhHHHHHHHHHHHHHhCcC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccch----
Confidence 345666664 4578899999999999876322 2 356789999999999999999999999998755 3
Q ss_pred HHHHHHHHHHhccc-ccHHHHHHHHHhHHH
Q psy9584 100 CRLIFQLAQIHAGE-KDYELASSLLGVGVD 128 (466)
Q Consensus 100 ~~~~fqLA~i~~~~-~D~~~A~~~L~~g~~ 128 (466)
...++.+|.++... |++..|++.++.+..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 76 KDVWAAKADALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHHHHHHHHHHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 34567899999999 999999999988764
No 154
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.91 E-value=0.0072 Score=53.14 Aligned_cols=129 Identities=16% Similarity=0.058 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHH
Q psy9584 283 TFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLT 362 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~ 362 (466)
.-+..++|.+|...|+..+....++++-...-......+.+.+.+ ..++...+|...++++++.....
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~------~~~~~~~~a~~~~~~al~~~P~~------ 107 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLEL------HQQAAESPELKRLEQELAANPDN------ 107 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHH------HHHHTSCHHHHHHHHHHHHSTTC------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHH------HhhcccchHHHHHHHHHHhCCCC------
Confidence 356789999999988666655555443211001111112121211 22334456889999999865543
Q ss_pred HhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHH
Q psy9584 363 SCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 363 ~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~ 427 (466)
..++..+|.++...|++++|......++...-...|. .+...|.++|...|+.+.|...|.
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~----~a~~~l~~~~~~~g~~~~A~~~y~ 168 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKVNLGAQDG----EVKKTFMDILSALGQGNAIASKYR 168 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTT----HHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChH----HHHHHHHHHHHHhCCCCcHHHHHH
Confidence 3466789999999999999999999988765444332 233467799999999999987765
No 155
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.89 E-value=0.076 Score=50.95 Aligned_cols=116 Identities=9% Similarity=0.034 Sum_probs=78.8
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHh------cCCH-------HHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTH------TKNI-------DLARNHLEQAWHLSQSINAFDDVKFEAASVL 68 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~------T~N~-------~~A~~hLeka~~L~~~~~~~~d~K~~a~slL 68 (466)
|+.+++.+++..| .-+.+.+.+|..+... ..+. ++|+..+++|+....+ .+ ..+...+
T Consensus 35 a~~~~~~al~~~p---~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p--~~----~~~~~~~ 105 (308)
T 2ond_A 35 VMFAYEQCLLVLG---HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLK--KN----MLLYFAY 105 (308)
T ss_dssp HHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTT--TC----HHHHHHH
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCc--cc----HHHHHHH
Confidence 3456655554332 1134567788776543 3454 8999999999873222 22 2467788
Q ss_pred HHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHH
Q psy9584 69 AELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDY 129 (466)
Q Consensus 69 a~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~ 129 (466)
|.++...|.+..+..+++++++.....+. .....++.++...|+++.|.+.+++++..
T Consensus 106 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 106 ADYEESRMKYEKVHSIYNRLLAIEDIDPT---LVYIQYMKFARRAEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTSSSSCTH---HHHHHHHHHHHHHHCHHHHHHHHHHHHTS
T ss_pred HHHHHhcCCHHHHHHHHHHHHhccccCcc---HHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 99999999999999999999987643321 13345677777789999998888887653
No 156
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.88 E-value=0.0089 Score=48.93 Aligned_cols=87 Identities=10% Similarity=-0.027 Sum_probs=71.8
Q ss_pred CcchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccc
Q psy9584 1 MCIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNL 80 (466)
Q Consensus 1 ~ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ 80 (466)
.|+.+++.+++..+.+...+.++..+|.+++ ...+.++|..++++++.+- |.. ..+...+|.+|...|++..
T Consensus 8 ~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~---p~~----~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 8 QAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQF---PNH----QALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp CCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC---TTC----HHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhC---CCc----hHHHHHHHHHHHHcCCHHH
Confidence 4789999999876544566788999998854 6789999999999998762 323 5678889999999999999
Q ss_pred hhHHHHHHHHhhchh
Q psy9584 81 SKPILRRAIELSQHS 95 (466)
Q Consensus 81 ak~~l~k~i~~s~~~ 95 (466)
+...++++++...+.
T Consensus 80 A~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 80 GVELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999999987644
No 157
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.87 E-value=0.0068 Score=66.07 Aligned_cols=113 Identities=16% Similarity=0.003 Sum_probs=85.5
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccch
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLS 81 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~a 81 (466)
|+.+++.+++..+.. +.++..+|.+++ ...+.++|..++++|+.+-.. + ..++..||.+|...|++..
T Consensus 452 A~~~~~~al~~~p~~---~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~---~----~~~~~~lg~~~~~~g~~~~- 519 (681)
T 2pzi_A 452 ATRKLDDLAERVGWR---WRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPG---E----LAPKLALAATAELAGNTDE- 519 (681)
T ss_dssp HHHHHHHHHHHHCCC---HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTT---C----SHHHHHHHHHHHHHTCCCT-
T ss_pred HHHHHHHHhccCcch---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCC---C----hHHHHHHHHHHHHcCChHH-
Confidence 566777666544422 456777887754 568899999999998876332 3 3566789999999999988
Q ss_pred hHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 82 KPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 82 k~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
...++++++...+++ ..++.+|.++...||++.|++.+++++++.
T Consensus 520 ~~~~~~al~~~P~~~----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 564 (681)
T 2pzi_A 520 HKFYQTVWSTNDGVI----SAAFGLARARSAEGDRVGAVRTLDEVPPTS 564 (681)
T ss_dssp TCHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHTSCTTS
T ss_pred HHHHHHHHHhCCchH----HHHHHHHHHHHHcCCHHHHHHHHHhhcccC
Confidence 889999998876542 355788999999999999999998877653
No 158
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=96.86 E-value=0.014 Score=57.73 Aligned_cols=131 Identities=13% Similarity=0.065 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCcccccc----------chhhHHHHHHHhHHHhhhhcHHHHHHHHHHH
Q psy9584 280 ELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHS----------HSLRAAAYYVQGLQSFFQARYNEAKRYLRET 349 (466)
Q Consensus 280 ~~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~----------~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~ 349 (466)
...+.+..++|.+|.+.++-.+....+++.-. ..+... ..+++.+++-.|...+..++|.+|..+++++
T Consensus 144 p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~-~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 144 LEQSTIVKERGTVYFKEGKYKQALLQYKKIVS-WLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34567888888888888766666665553322 112211 2234677777888888889999999999988
Q ss_pred HHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHH
Q psy9584 350 LKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVREN 423 (466)
Q Consensus 350 lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~ 423 (466)
+++ ..-...++..+|.++...|++++|......++.+.-.. ..+...|..+|...|+++++.
T Consensus 223 l~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~------~~a~~~l~~~~~~~~~~~~a~ 284 (336)
T 1p5q_A 223 LEL------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN------KAAKTQLAVCQQRIRRQLARE 284 (336)
T ss_dssp HHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHh------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHHHHHHHH
Confidence 874 22245578888999999999999999988888875332 235567788888888888773
No 159
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.86 E-value=0.0059 Score=49.53 Aligned_cols=87 Identities=17% Similarity=0.113 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHH
Q psy9584 39 LARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYEL 118 (466)
Q Consensus 39 ~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~ 118 (466)
.|..++++++.+. +.. ..+...||.+|...|.+..+...++++++..... ...++.+|.++...||++.
T Consensus 3 ~a~~~~~~al~~~---p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~g~~~~ 71 (115)
T 2kat_A 3 AITERLEAMLAQG---TDN----MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY----SVAWKWLGKTLQGQGDRAG 71 (115)
T ss_dssp CHHHHHHHHHTTT---CCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHhC---CCc----HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc----HHHHHHHHHHHHHcCCHHH
Confidence 4667777776542 222 3578899999999999999999999999987544 2344678999999999999
Q ss_pred HHHHHHhHHHHHHHhcCh
Q psy9584 119 ASSLLGVGVDYANISNAQ 136 (466)
Q Consensus 119 A~~~L~~g~~~A~~~~d~ 136 (466)
|++.++++++.....++.
T Consensus 72 A~~~~~~al~~~~~~~~~ 89 (115)
T 2kat_A 72 ARQAWESGLAAAQSRGDQ 89 (115)
T ss_dssp HHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHhccccccH
Confidence 999999999999887776
No 160
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.85 E-value=0.035 Score=50.13 Aligned_cols=108 Identities=12% Similarity=0.159 Sum_probs=82.7
Q ss_pred HHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhh------hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHH---hhc
Q psy9584 325 AYYVQGLQSFFQARYNEAKRYLRETLKMANAE------DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQL---ASK 395 (466)
Q Consensus 325 ~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~------~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~l---AkK 395 (466)
..+-.|...+..|+|.+|...|++++++.... +..-..+.++.-+|.++..+|++++|......|+.+ +-+
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence 33446777799999999999999999998872 333344558999999999999999999999999997 223
Q ss_pred CCChhHHHHHH--HHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 396 IPDVHVQLWAS--AILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 396 ~~D~~~qlw~~--~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
+..-....|.. .-....+..+|+++.|.+.|..-..+
T Consensus 93 ~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 93 LNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 33334556622 23456888999999999988876555
No 161
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.80 E-value=0.29 Score=58.00 Aligned_cols=117 Identities=11% Similarity=-0.028 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHH----------HHHHHHhcccccHHHHHHHHHhHHHHHHH-
Q psy9584 64 AASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLI----------FQLAQIHAGEKDYELASSLLGVGVDYANI- 132 (466)
Q Consensus 64 a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~----------fqLA~i~~~~~D~~~A~~~L~~g~~~A~~- 132 (466)
++=.+||..-...+.+..-.+|...=++.|+...|.-..- .-.+..++..|++..|+++|+++. ....
T Consensus 939 l~k~~arylv~r~d~~lW~~vl~~~n~~RR~Lidqv~a~aL~e~~~PeeVs~~vKaf~~aglp~EaieLLEKiv-l~~s~ 1017 (1630)
T 1xi4_A 939 LFKSLSRYLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIV-LDNSV 1017 (1630)
T ss_pred hHHHHHHHHHHhcCHHHHHHHhcCCcHHHHHHHHHHHHhhcccccCHHHhHHHHHHHHhCCCHHHHHHHHHHHH-cCCCc
Confidence 4445566666666666666666444444444444533221 124566789999999999999999 3221
Q ss_pred -hcChHHHHHHHHHHHHHHhcccCccHHHHHHHH--------HhhHhhhhccccchHhhHHHHHHH
Q psy9584 133 -SNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQ--------AGYQVENWTGSQYQKEYLKVFFLV 189 (466)
Q Consensus 133 -~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~--------~~~l~~~~~g~~~~~e~L~~~~~~ 189 (466)
.+.+.++.+ |+++-+.. +...+...+++ ++.+..+ .|. +.|+..+|-++
T Consensus 1018 fs~n~~Lqnl--Li~tAIka---D~~Rv~eyI~kLd~~d~~eIA~Iai~-lgl--yEEAf~IYkKa 1075 (1630)
T 1xi4_A 1018 FSEHRNLQNL--LILTAIKA---DRTRVMEYINRLDNYDAPDIANIAIS-NEL--FEEAFAIFRKF 1075 (1630)
T ss_pred ccccHHHHHH--HHHHHHHh---ChhhHHHHHHHhhhccHHHHHHHHHh-CCC--HHHHHHHHHHc
Confidence 234555555 33333322 22323333333 3444444 243 66777776663
No 162
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.78 E-value=0.015 Score=58.72 Aligned_cols=104 Identities=12% Similarity=0.120 Sum_probs=83.1
Q ss_pred HHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhh----------hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHH
Q psy9584 323 AAAYYVQGLQSFFQARYNEAKRYLRETLKMANAE----------DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQL 392 (466)
Q Consensus 323 a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~----------~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~l 392 (466)
+..++-.|...+.+++|.+|.++|++++++.... .+......++.-+|.+++..|++++|.+....++.+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 3344556777789999999999999999976553 256667778999999999999999999999999986
Q ss_pred hhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 393 ASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 393 AkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
. |+. ..+...+..+|...|++++|.++++.-...
T Consensus 303 ~---p~~---~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 303 D---PSN---TKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp C---TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred C---chh---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4 332 345567888999999999999888765544
No 163
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.77 E-value=0.31 Score=57.73 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=58.1
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChh-------HHHHHH
Q psy9584 334 FFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVH-------VQLWAS 406 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~-------~qlw~~ 406 (466)
...|+++||.+++..+|.+- +-+.-.++-||.++..-+. ++|.......-+++.-.. ..+|.-
T Consensus 1291 e~~G~feEAI~LlE~aL~Le------raH~gmftELaiLyaKy~p----eklmEhlk~f~~rini~k~~r~~e~~~lW~e 1360 (1630)
T 1xi4_A 1291 QDRGYFEELITMLEAALGLE------RAHMGMFTELAILYSKFKP----QKMREHLELFWSRVNIPKVLRAAEQAHLWAE 1360 (1630)
T ss_pred HHcCCHHHHHHHHHHHhccC------hhHhHHHHHHHHHHHhCCH----HHHHHHHHHHHHhcccchHhHHHHHHHHHHH
Confidence 67899999999999998743 5566667778888875433 455555555556665432 446765
Q ss_pred HHHHHHHHHcCCchHHHHHHHHH
Q psy9584 407 AILKDLYKILNDPVRENEALQMH 429 (466)
Q Consensus 407 ~lL~~ly~~~g~~~~~~e~~~~~ 429 (466)
.+ -||...|++++|....-.|
T Consensus 1361 lv--~LY~~~~e~dnA~~tm~~h 1381 (1630)
T 1xi4_A 1361 LV--FLYDKYEEYDNAIITMMNH 1381 (1630)
T ss_pred HH--HHHHhcccHHHHHHHHHhc
Confidence 54 4999999999998544444
No 164
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.64 E-value=0.016 Score=46.92 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=61.9
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
+.-|...+..|++.+|.+++++++++.... ..++..+|.++...|++++|......++.+..+.+|........
T Consensus 23 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~ 96 (115)
T 2kat_A 23 FTLGKTYAEHEQFDAALPHLRAALDFDPTY------SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQ 96 (115)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence 344555588999999999999999875533 34678899999999999999999999999998888865444444
Q ss_pred HHHHHH
Q psy9584 407 AILKDL 412 (466)
Q Consensus 407 ~lL~~l 412 (466)
..|.++
T Consensus 97 ~~l~~l 102 (115)
T 2kat_A 97 VFLRRL 102 (115)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444443
No 165
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.63 E-value=0.012 Score=56.43 Aligned_cols=102 Identities=21% Similarity=0.083 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhH
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWH 99 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~ 99 (466)
+..+..+|..+ ....+.++|..++++|+.+... ...+++.+|.+|...|.+..|...++++++...++
T Consensus 4 a~~~~~~g~~~-~~~g~~~~A~~~~~~al~~~p~-------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---- 71 (281)
T 2c2l_A 4 AQELKEQGNRL-FVGRKYPEAAACYGRAITRNPL-------VAVYYTNRALCYLKMQQPEQALADCRRALELDGQS---- 71 (281)
T ss_dssp HHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCSC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC----
T ss_pred HHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCc-------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC----
Confidence 55677788775 4578899999999999886322 24678899999999999999999999999887554
Q ss_pred HHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHh
Q psy9584 100 CRLIFQLAQIHAGEKDYELASSLLGVGVDYANIS 133 (466)
Q Consensus 100 ~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~ 133 (466)
...++.+|.++...|+++.|++.+++++.+.-..
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 3456678999999999999999999999988754
No 166
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.60 E-value=0.018 Score=59.68 Aligned_cols=121 Identities=7% Similarity=-0.048 Sum_probs=94.7
Q ss_pred HHHhCCccchhHHHHHHHHhhc----hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHH-hcChHHHHHHHHHH
Q psy9584 72 YETQLLSNLSKPILRRAIELSQ----HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANI-SNAQYTRVLFLLSR 146 (466)
Q Consensus 72 y~~~~~~~~ak~~l~k~i~~s~----~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~-~~d~~~~~lf~ls~ 146 (466)
+..+|.+..+..+.+++++... ..-..+.+.+..||.+|..+|+|+.|++++++.+.+..+ .|..
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~---------- 366 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS---------- 366 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS----------
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC----------
Confidence 4467788889999999998875 344678999999999999999999999999999998886 4444
Q ss_pred HHHHhcccCccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHH
Q psy9584 147 CMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQS 214 (466)
Q Consensus 147 ~~~ll~~~~~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~ 214 (466)
...+...+++++.++.+ +|. +.+++..|-+.++|.....=-+...+++.+..|.+.
T Consensus 367 ---------Hp~~a~~l~nLa~~~~~-~g~--~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~ 422 (429)
T 3qwp_A 367 ---------HPVRGVQVMKVGKLQLH-QGM--FPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEEC 422 (429)
T ss_dssp ---------CHHHHHHHHHHHHHHHH-TTC--HHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHH
T ss_pred ---------ChHHHHHHHHHHHHHHh-cCC--HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 55678889999999988 787 899999999999988654433344444444444443
No 167
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=96.60 E-value=0.013 Score=53.16 Aligned_cols=96 Identities=9% Similarity=-0.029 Sum_probs=60.5
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHH----------HhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLT----------SCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKI 396 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~----------~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~ 396 (466)
+..|...+..|++.+|..++++++++.......... .....-+|.++...|++++|......++.+.-+.
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 8 LQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 445666677888888888888887765443221100 0011127888888888888888888777664332
Q ss_pred CChhHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q psy9584 397 PDVHVQLWASAILKDLYKILNDPVRENEALQM 428 (466)
Q Consensus 397 ~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~ 428 (466)
..+...+..+|...|++++|.+.++.
T Consensus 88 ------~~~~~~lg~~~~~~g~~~~A~~~~~~ 113 (208)
T 3urz_A 88 ------VDCLEACAEMQVCRGQEKDALRMYEK 113 (208)
T ss_dssp ------HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 23445567777788888887775543
No 168
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.58 E-value=0.013 Score=60.77 Aligned_cols=103 Identities=11% Similarity=0.002 Sum_probs=87.8
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhh--hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC--CChhHHHHHHHHH
Q psy9584 334 FFQARYNEAKRYLRETLKMANAE--DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKI--PDVHVQLWASAIL 409 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~--~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~--~D~~~qlw~~~lL 409 (466)
..+++|++|...++++|.+.... +.+-.++.++..||.+|..+|++++|+.+...++.+-++. ++++....+..=|
T Consensus 298 ~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 298 KAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 46899999999999999876544 5567788899999999999999999999999999998885 6777778888889
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHH
Q psy9584 410 KDLYKILNDPVRENEALQMHCNFSQML 436 (466)
Q Consensus 410 ~~ly~~~g~~~~~~e~~~~~~~~s~~l 436 (466)
..+|...|++++|.+.++.-..+-+..
T Consensus 378 a~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 378 GKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999988777665554443
No 169
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.52 E-value=0.018 Score=55.12 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=73.3
Q ss_pred HHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHH
Q psy9584 325 AYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLW 404 (466)
Q Consensus 325 ~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw 404 (466)
..+..|...+.+|+|.+|..+|+++++..... ..++..+|.++...|++++|.+....++.+. |+. ..
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~---p~~---~~ 73 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLV------AVYYTNRALCYLKMQQPEQALADCRRALELD---GQS---VK 73 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC---TTC---HH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC---CCC---HH
Confidence 33556666688999999999999999865432 3467789999999999999999998888763 332 34
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q psy9584 405 ASAILKDLYKILNDPVRENEALQMHCNFS 433 (466)
Q Consensus 405 ~~~lL~~ly~~~g~~~~~~e~~~~~~~~s 433 (466)
+...+..+|...|++++|.+.++......
T Consensus 74 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 74 AHFFLGQCQLEMESYDEAIANLQRAYSLA 102 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45567888999999999988776655443
No 170
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.47 E-value=0.04 Score=47.74 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=73.2
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHH-HHhcCCh--HHHHHhhHHHHHHhhcCCChhHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHI-FLSLGNH--RESMNMVTPAMQLASKIPDVHVQL 403 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i-~l~~~~~--~ea~~~~~~a~~lAkK~~D~~~ql 403 (466)
+.-|...+..+++.+|..++++++++.... ...+..+|.+ ++..|++ ++|.+....++.+.. +. .
T Consensus 48 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p---~~---~ 115 (177)
T 2e2e_A 48 ALLGEYYLWQNDYSNSLLAYRQALQLRGEN------AELYAALATVLYYQASQHMTAQTRAMIDKALALDS---NE---I 115 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHCSC------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT---TC---H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC---Cc---H
Confidence 444555588999999999999999976543 3467789999 8899998 999999999988743 32 2
Q ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q psy9584 404 WASAILKDLYKILNDPVRENEALQMHCNF 432 (466)
Q Consensus 404 w~~~lL~~ly~~~g~~~~~~e~~~~~~~~ 432 (466)
.+...+..+|...|++++|.++++.-...
T Consensus 116 ~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 116 TALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 33456888999999999998887765443
No 171
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.46 E-value=0.0062 Score=60.34 Aligned_cols=108 Identities=14% Similarity=0.006 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcccc----------chHHHHHHHHHHHHHHHHhCCccchhHHHHHH
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINA----------FDDVKFEAASVLAELYETQLLSNLSKPILRRA 88 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~----------~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~ 88 (466)
.+..+..+|..+ ....+.++|..++++|+.+...... ...++-.++..+|.+|...|.+..|...++++
T Consensus 178 ~a~~~~~~g~~~-~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 178 AADRRKMDGNSL-FKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHHT-CSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 567777888764 4567899999999999887443210 11233358999999999999999999999999
Q ss_pred HHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 89 IELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 89 i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
++...++ ...++.+|.++...|+++.|++.|++++.+.-
T Consensus 257 l~~~p~~----~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 257 LTEEEKN----PKALFRRGKAKAELGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHHCTTC----HHHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 9987654 35667899999999999999999999887754
No 172
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.01 Score=46.87 Aligned_cols=86 Identities=13% Similarity=0.034 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChH--HH
Q psy9584 62 FEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQY--TR 139 (466)
Q Consensus 62 ~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~--~~ 139 (466)
.++...+|.++...|++..+...++++++..... ...++.+|.++...|+++.|++.++.++.+....++.. ..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 79 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN----PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSK 79 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHH
Confidence 4677889999999999999999999999988654 34566899999999999999999999998776555543 44
Q ss_pred HHHHHHHHHHHh
Q psy9584 140 VLFLLSRCMLLL 151 (466)
Q Consensus 140 ~lf~ls~~~~ll 151 (466)
+++.+..++..+
T Consensus 80 ~~~~~~~~~~~~ 91 (111)
T 2l6j_A 80 LQYRLELAQGAV 91 (111)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555444
No 173
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.43 E-value=0.026 Score=58.29 Aligned_cols=128 Identities=13% Similarity=0.085 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHhhhCCCcccccc----------chhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHH
Q psy9584 282 WTFANLNLAIVYLRGKREGDFAALLERINPETLTSHS----------HSLRAAAYYVQGLQSFFQARYNEAKRYLRETLK 351 (466)
Q Consensus 282 ~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~----------~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk 351 (466)
.+.+..|+|..|.+.++-.+.....++.-. ..+... ..+++.+++-.|...+..++|.+|..+++++++
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~-~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVS-WLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 345666666666666544444444432211 011110 223355555566666666666666666666666
Q ss_pred hhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHH
Q psy9584 352 MANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRE 422 (466)
Q Consensus 352 ~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~ 422 (466)
+.... .-++..+|.+++..|++++|.+....++.+.-..++ +...|..++...|+++++
T Consensus 346 ~~p~~------~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~------a~~~l~~~~~~~~~~~~a 404 (457)
T 1kt0_A 346 LDSAN------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKA------ARLQISMCQKKAKEHNER 404 (457)
T ss_dssp HSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----C------HHHHHHHHHHHHHHHHHH
T ss_pred cCCcc------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHHHHHHH
Confidence 54432 345666666666666666666666666665433332 334455666666665544
No 174
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.31 E-value=0.02 Score=49.10 Aligned_cols=105 Identities=14% Similarity=0.046 Sum_probs=78.8
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH----hCC
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYET----QLL 77 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~----~~~ 77 (466)
|+++++-+.+...++-. +|.+ +....+++.|..++++|... + -..+++.|+.+|.. .++
T Consensus 14 A~~~~~~aa~~g~~~a~-------lg~~-y~~g~~~~~A~~~~~~Aa~~---g------~~~a~~~Lg~~y~~G~g~~~d 76 (138)
T 1klx_A 14 AIQYYVKACELNEMFGC-------LSLV-SNSQINKQKLFQYLSKACEL---N------SGNGCRFLGDFYENGKYVKKD 76 (138)
T ss_dssp HHHHHHHHHHTTCTTHH-------HHHH-TCTTSCHHHHHHHHHHHHHT---T------CHHHHHHHHHHHHHCSSSCCC
T ss_pred HHHHHHHHHcCCCHhhh-------HHHH-HHcCCCHHHHHHHHHHHHcC---C------CHHHHHHHHHHHHcCCCCCcc
Confidence 67778777765543322 7755 45567888899999999654 2 24789999999998 667
Q ss_pred ccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcc----cccHHHHHHHHHhHHHH
Q psy9584 78 SNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAG----EKDYELASSLLGVGVDY 129 (466)
Q Consensus 78 ~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~----~~D~~~A~~~L~~g~~~ 129 (466)
+..+...++++.+.- . ....+.|+.++.. ++|+..|++.++++++.
T Consensus 77 ~~~A~~~~~~Aa~~g--~----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 77 LRKAAQYYSKACGLN--D----QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHHHTT--C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCC--C----HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 788999999998763 2 3445678888876 99999999999988764
No 175
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.30 E-value=0.048 Score=41.24 Aligned_cols=61 Identities=23% Similarity=0.411 Sum_probs=50.9
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHh
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLA 393 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lA 393 (466)
+.-|...+..+++.+|.++++++++..... ..++..+|.++...|++++|.+....++.+.
T Consensus 13 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 13 YNLGNAYYKQGDYDEAIEYYQKALELDPNN------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 445555688999999999999999875432 3467789999999999999999999998874
No 176
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.17 E-value=0.23 Score=49.51 Aligned_cols=168 Identities=11% Similarity=-0.001 Sum_probs=106.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhH-HH
Q psy9584 23 HLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWH-CR 101 (466)
Q Consensus 23 rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~-~~ 101 (466)
++-+|+++. +..|.++|...|++++.- ++ .....++..+++++|.+.|....|+..+++..+...+. .|- -.
T Consensus 103 ~~~la~i~~-~~g~~eeAL~~l~~~i~~---~~--~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~-~~~~d~ 175 (310)
T 3mv2_B 103 LYLLATAQA-ILGDLDKSLETCVEGIDN---DE--AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDT-VSGDNE 175 (310)
T ss_dssp HHHHHHHHH-HHTCHHHHHHHHHHHHTS---SC--STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHH-HHHHHH
T ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHhcc---CC--CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc-cccchH
Confidence 456676654 469999999999997442 11 14678899999999999999999999999876654321 243 34
Q ss_pred HHHHHHHH--hcccc--cHHHHHHHHHhHHHHHHHhcC-hHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhhcc-
Q psy9584 102 LIFQLAQI--HAGEK--DYELASSLLGVGVDYANISNA-QYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTG- 175 (466)
Q Consensus 102 ~~fqLA~i--~~~~~--D~~~A~~~L~~g~~~A~~~~d-~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~~g- 175 (466)
.+.+|++. ....| ++..|+.+++.. +.+.++ +...++.. .+++..+.++.+..+..+..+.++...
T Consensus 176 ~l~~Laea~v~l~~g~~~~q~A~~~f~El---~~~~p~~~~~~lLln-----~~~~~g~~~eAe~~L~~l~~~~p~~~~k 247 (310)
T 3mv2_B 176 MILNLAESYIKFATNKETATSNFYYYEEL---SQTFPTWKTQLGLLN-----LHLQQRNIAEAQGIVELLLSDYYSVEQK 247 (310)
T ss_dssp HHHHHHHHHHHHHHTCSTTTHHHHHHHHH---HTTSCSHHHHHHHHH-----HHHHHTCHHHHHHHHHHHHSHHHHTTTC
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHH---HHhCCCcccHHHHHH-----HHHHcCCHHHHHHHHHHHHHhccccccc
Confidence 45567655 44444 899999999995 344444 22344444 345555666667777776666543211
Q ss_pred ---ccchHhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHH
Q psy9584 176 ---SQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQ 212 (466)
Q Consensus 176 ---~~~~~e~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq 212 (466)
.|...+ ++. =.|+++...|+ .+..++.+|+
T Consensus 248 ~~~~p~~~~---~La--N~i~l~~~lgk--~a~~l~~qL~ 280 (310)
T 3mv2_B 248 ENAVLYKPT---FLA--NQITLALMQGL--DTEDLTNQLV 280 (310)
T ss_dssp HHHHSSHHH---HHH--HHHHHHHHTTC--TTHHHHHHHH
T ss_pred ccCCCCCHH---HHH--HHHHHHHHhCh--HHHHHHHHHH
Confidence 132222 221 22444445576 6667776665
No 177
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.16 E-value=0.031 Score=53.63 Aligned_cols=129 Identities=13% Similarity=0.129 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHH
Q psy9584 283 TFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLT 362 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~ 362 (466)
.-+.+++|.+|++.|+..+....++++-...-...... +..++....+++..+|.+.|+++++......
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~------~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~----- 219 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQG------LVAQIELLXQAADTPEIQQLQQQVAENPEDA----- 219 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHH------HHHHHHHHHHHTSCHHHHHHHHHHHHCTTCH-----
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHH------HHHHHHHHhhcccCccHHHHHHHHhcCCccH-----
Confidence 35688999999998877766666655432100111112 2223333677888899999999998655432
Q ss_pred HhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHH
Q psy9584 363 SCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 363 ~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~ 427 (466)
.+...+|.++...|++++|.+....++.......|. .+..-|.++|...|+.+.+...|.
T Consensus 220 -~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~----~a~~~l~~~~~~~g~~~~a~~~~r 279 (287)
T 3qou_A 220 -ALATQLALQLHQVGRNEEALELLFGHLRXDLTAADG----QTRXTFQEILAALGTGDALASXYR 279 (287)
T ss_dssp -HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGG----HHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred -HHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccc----hHHHHHHHHHHHcCCCCcHHHHHH
Confidence 245688999999999999999999999886555432 334566789999999988876654
No 178
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.15 E-value=0.017 Score=52.72 Aligned_cols=108 Identities=17% Similarity=0.070 Sum_probs=74.2
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhC----C
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQL----L 77 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~----~ 77 (466)
|+++++...+.. .+.++..+|.+++. ..|.++|..++++|... ++ ..+++.||.+|.. + +
T Consensus 5 A~~~~~~aa~~g-----~~~a~~~lg~~~~~-~~~~~~A~~~~~~a~~~---g~------~~a~~~lg~~y~~-~g~~~~ 68 (212)
T 3rjv_A 5 PGSQYQQQAEAG-----DRRAQYYLADTWVS-SGDYQKAEYWAQKAAAQ---GD------GDALALLAQLKIR-NPQQAD 68 (212)
T ss_dssp TTHHHHHHHHTT-----CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHT---TC------HHHHHHHHHHTTS-STTSCC
T ss_pred HHHHHHHHHHCC-----CHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHc---CC------HHHHHHHHHHHHc-CCCCCC
Confidence 556665555432 24567778877655 67888888888888543 21 3677888888888 5 5
Q ss_pred ccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcc----cccHHHHHHHHHhHHHHHH
Q psy9584 78 SNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAG----EKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 78 ~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~----~~D~~~A~~~L~~g~~~A~ 131 (466)
+..+...++++++.- . ....+.||.++.. .+|+..|++.++++++.-.
T Consensus 69 ~~~A~~~~~~A~~~g--~----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 69 YPQARQLAEKAVEAG--S----KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp HHHHHHHHHHHHHTT--C----HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred HHHHHHHHHHHHHCC--C----HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 677888888886542 2 2344567777765 7888888888888776544
No 179
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.15 E-value=0.12 Score=53.32 Aligned_cols=115 Identities=16% Similarity=0.062 Sum_probs=94.1
Q ss_pred HHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhch---
Q psy9584 20 ARTHL--QLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQH--- 94 (466)
Q Consensus 20 a~~rL--rla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~--- 94 (466)
-|+++ |+|+++ ..+.+..+|...+.+...-|++.. -.....+.+.+-+++|+..++++.+|+.+.++......
T Consensus 97 lr~~l~~kL~~l~-~~~~~y~~a~~~i~~l~~~~~~~d-d~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 97 LRQSLEARLIALY-FDTALYTEALALGAQLLRELKKLD-DKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHTTSS-CTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHhccc-cchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 45555 899965 488999999999999888777643 24588999999999999999999999999998877752
Q ss_pred hhhhHHHHHHHHHHHhc-ccccHHHHHHHHHhHHHHHHHhcCh
Q psy9584 95 SIYWHCRLIFQLAQIHA-GEKDYELASSLLGVGVDYANISNAQ 136 (466)
Q Consensus 95 ~~~W~~~~~fqLA~i~~-~~~D~~~A~~~L~~g~~~A~~~~d~ 136 (466)
.|.-+..+...-|-.|+ .++||..|.+.+=.+.+-....|++
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~ 217 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSV 217 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccccccH
Confidence 35567777777888999 8999999999888877766677775
No 180
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.13 E-value=0.021 Score=62.18 Aligned_cols=123 Identities=14% Similarity=0.022 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHhCCCch---HHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhh
Q psy9584 283 TFANLNLAIVYLRGKREG---DFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLN 359 (466)
Q Consensus 283 ~~~~lNlai~Yl~~~~~~---e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~ 359 (466)
.-+.+++|.+|...++-. +.++.+-+++|.. +.++|..|...+..|++.+|.+.|++++++....
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~--- 500 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAERVGWR---------WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGE--- 500 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC---------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---
Confidence 346788999999977433 3444444455532 2233455665688999999999999999987654
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHH
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~ 427 (466)
..++..+|.++...|++++ ++....++.+.-..++ +..-+..+|...|++++|.+.++
T Consensus 501 ---~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~------a~~~lg~~~~~~g~~~~A~~~~~ 558 (681)
T 2pzi_A 501 ---LAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVIS------AAFGLARARSAEGDRVGAVRTLD 558 (681)
T ss_dssp ---SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHH------HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHH------HHHHHHHHHHHcCCHHHHHHHHH
Confidence 3466789999999999999 9999999877543322 44667889999999999987654
No 181
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.11 E-value=1.5 Score=45.06 Aligned_cols=142 Identities=10% Similarity=0.032 Sum_probs=91.7
Q ss_pred HhhhhcchhhHHHHHHHHHHHHHhCCCchH---HHHHHhhhCCCccccccchhhHHHHHHHhHHH-hhhhcHHHHHHHHH
Q psy9584 272 VERLSQERELWTFANLNLAIVYLRGKREGD---FAALLERINPETLTSHSHSLRAAAYYVQGLQS-FFQARYNEAKRYLR 347 (466)
Q Consensus 272 Al~~~~~~~~~~~~~lNlai~Yl~~~~~~e---~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~-~~~~~~~eAk~~lr 347 (466)
|++. +++....+.++.+.++.+.++-.+ +++.+-+..|.. . ..++-.|... ...|++.+|++.++
T Consensus 347 al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~----~-----~~~~~~a~~~~~~~~~~~~A~~~~e 415 (530)
T 2ooe_A 347 LLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR----H-----HVYVTAALMEYYCSKDKSVAFKIFE 415 (530)
T ss_dssp HHHS--SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC----T-----HHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HhCc--cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc----h-----HHHHHHHHHHHHHcCChhHHHHHHH
Confidence 5554 333334678888888888663332 333333233311 1 1111122221 35899999999999
Q ss_pred HHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHH
Q psy9584 348 ETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 348 e~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~ 427 (466)
++++..... ......++.+....|+.++|......++......|+....+|..-+ ++....||.+++...+.
T Consensus 416 ~al~~~p~~------~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~--~~e~~~G~~~~~~~~~~ 487 (530)
T 2ooe_A 416 LGLKKYGDI------PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFL--AFESNIGDLASILKVEK 487 (530)
T ss_dssp HHHHHHTTC------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHH--HHHHHSSCHHHHHHHHH
T ss_pred HHHHHCCCC------HHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHH--HHHHHcCCHHHHHHHHH
Confidence 999965432 2345678888999999999999999998876666666677886532 45667899999877665
Q ss_pred HHHHH
Q psy9584 428 MHCNF 432 (466)
Q Consensus 428 ~~~~~ 432 (466)
.....
T Consensus 488 r~~~~ 492 (530)
T 2ooe_A 488 RRFTA 492 (530)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 182
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.05 E-value=0.035 Score=50.63 Aligned_cols=110 Identities=16% Similarity=0.017 Sum_probs=68.0
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH---
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTK----NIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYET--- 74 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~----N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~--- 74 (466)
|+.+++-+++... +.++..||.++.. . |.++|..++++|.. ++ -..+.+.||.+|..
T Consensus 37 A~~~~~~a~~~g~-----~~a~~~lg~~y~~--~g~~~~~~~A~~~~~~A~~---~g------~~~a~~~Lg~~y~~g~g 100 (212)
T 3rjv_A 37 AEYWAQKAAAQGD-----GDALALLAQLKIR--NPQQADYPQARQLAEKAVE---AG------SKSGEIVLARVLVNRQA 100 (212)
T ss_dssp HHHHHHHHHHTTC-----HHHHHHHHHHTTS--STTSCCHHHHHHHHHHHHH---TT------CHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHcCC-----HHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHH---CC------CHHHHHHHHHHHHcCCC
Confidence 5666666654332 3556677777554 5 78888888887733 22 13466777777776
Q ss_pred -hCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcc----cccHHHHHHHHHhHHHH
Q psy9584 75 -QLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAG----EKDYELASSLLGVGVDY 129 (466)
Q Consensus 75 -~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~----~~D~~~A~~~L~~g~~~ 129 (466)
.+++..+...++++++.-.. .-.....+.|+.++.. ++|+..|++.++++++.
T Consensus 101 ~~~d~~~A~~~~~~A~~~~~~--~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 101 GATDVAHAITLLQDAARDSES--DAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp SSCCHHHHHHHHHHHTSSTTS--HHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHcCCC--cchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 77777777777777765421 0112334456666655 67777777777777666
No 183
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.02 E-value=0.048 Score=41.21 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 61 KFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 61 K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
...+...+|.+|...|.+..+...++++++..... ...++.+|.++...||++.|++.+++++...
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN----AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 35678889999999999999999999999987544 3456688999999999999999999998764
No 184
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.02 E-value=0.025 Score=55.95 Aligned_cols=102 Identities=9% Similarity=0.006 Sum_probs=79.5
Q ss_pred HHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhh-----------hhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHH
Q psy9584 323 AAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDL-----------NRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQ 391 (466)
Q Consensus 323 a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l-----------~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~ 391 (466)
+..++-.|...+..++|.+|.++|++++++...... ..+...++..+|.+++..|++++|.+.+..++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445566777778999999999999999997655331 122223788999999999999999999999998
Q ss_pred HhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 392 LASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 392 lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
+. |+. ..+..-+..+|...|+++.|.+.++.-.
T Consensus 259 ~~---p~~---~~a~~~lg~a~~~~g~~~~A~~~l~~al 291 (338)
T 2if4_A 259 EE---EKN---PKALFRRGKAKAELGQMDSARDDFRKAQ 291 (338)
T ss_dssp HC---TTC---HHHHHHHHHHHHTTTCHHHHHHHHHHTT
T ss_pred hC---CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 74 332 3455677889999999999988776543
No 185
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.99 E-value=0.053 Score=52.05 Aligned_cols=154 Identities=5% Similarity=-0.019 Sum_probs=102.2
Q ss_pred cchhHHHhhcCCCC-hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH-HhCCcc
Q psy9584 2 CIQCLQAVFNFKPP-PRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYE-TQLLSN 79 (466)
Q Consensus 2 ai~CLeAvl~~~~~-p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~-~~~~~~ 79 (466)
|+.+++.+++..|. |. .++..+|.++ ....+.++|+..+++|+.+... .. +.+...+.+.. ..|.+.
T Consensus 118 A~~~~~~al~~~p~~~~---~~~~~~~~~~-~~~~~~~~A~~~~~~a~~~~p~---~~----~~~~~~a~~~~~~~~~~~ 186 (308)
T 2ond_A 118 VHSIYNRLLAIEDIDPT---LVYIQYMKFA-RRAEGIKSGRMIFKKAREDART---RH----HVYVTAALMEYYCSKDKS 186 (308)
T ss_dssp HHHHHHHHHTSSSSCTH---HHHHHHHHHH-HHHHCHHHHHHHHHHHHTSTTC---CT----HHHHHHHHHHHHTSCCHH
T ss_pred HHHHHHHHHhccccCcc---HHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCC---CH----HHHHHHHHHHHHHcCCHH
Confidence 67788888875542 22 2788889876 4578899999999999875322 22 22333444433 368889
Q ss_pred chhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHH
Q psy9584 80 LSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDA 159 (466)
Q Consensus 80 ~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v 159 (466)
.+..+++++++..-+. ..+...++.++...||++.|...++.++....-.-+....+....+...... .+.+.+
T Consensus 187 ~A~~~~~~al~~~p~~----~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~--g~~~~a 260 (308)
T 2ond_A 187 VAFKIFELGLKKYGDI----PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNI--GDLASI 260 (308)
T ss_dssp HHHHHHHHHHHHHTTC----HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHH--SCHHHH
T ss_pred HHHHHHHHHHHhCCCc----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHc--CCHHHH
Confidence 9999999999987533 3444667888888999999999999999853111111233444444444333 345556
Q ss_pred HHHHHHHhhHhhh
Q psy9584 160 VQLLTQAGYQVEN 172 (466)
Q Consensus 160 ~~al~~~~~l~~~ 172 (466)
..++.++-++.+.
T Consensus 261 ~~~~~~a~~~~p~ 273 (308)
T 2ond_A 261 LKVEKRRFTAFRE 273 (308)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHccc
Confidence 7788888777764
No 186
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.97 E-value=0.075 Score=52.29 Aligned_cols=148 Identities=11% Similarity=-0.026 Sum_probs=98.6
Q ss_pred HHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHh
Q psy9584 285 ANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSC 364 (466)
Q Consensus 285 ~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~ 364 (466)
+.+..|..+...++-.+....++.+... .+. . . ..|+.|+..+..+++++|+.+++++.+.. .+-+...
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~---~p~-~--~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~----d~~~~~~ 172 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVA---GSE-H--L-VAWMKAVVYGAAERWTDVIDQVKSAGKWP----DKFLAGA 172 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCT---TCH-H--H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCS----CHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhc---CCc-h--H-HHHHHHHHHHHcCCHHHHHHHHHHhhccC----CcccHHH
Confidence 5566688888877666766777555431 111 1 1 45999999999999999999998665543 2334556
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHhhcC-CChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHhhh
Q psy9584 365 SLVLLGHIFLSLGNHRESMNMVTPAMQLASKI-PDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQMLLKDHFQS 443 (466)
Q Consensus 365 ~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~-~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s~~l~~~~~~~ 443 (466)
+.+.+|.++-.+|++++|+.....+.. ..+ |.- ..-+.--+.-+++..|+.++|.+.++--....-. .....+
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~~--g~~~P~~--~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~--~~~~~a 246 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEAND--SPAGEAC--ARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE--PKVAAA 246 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT--STTTTTT--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC--HHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhc--CCCCccc--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--HHHHHH
Confidence 788999999999999999999998762 222 321 2223334456778999999998876544433322 333444
Q ss_pred cccccc
Q psy9584 444 SERAEH 449 (466)
Q Consensus 444 ~~~~~~ 449 (466)
-.-|..
T Consensus 247 L~~~~~ 252 (282)
T 4f3v_A 247 LKDPSY 252 (282)
T ss_dssp HHCTTC
T ss_pred HhCCCC
Confidence 444444
No 187
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.94 E-value=0.11 Score=49.80 Aligned_cols=65 Identities=25% Similarity=0.144 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc
Q psy9584 21 RTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ 93 (466)
Q Consensus 21 ~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~ 93 (466)
..++.+|..++ ...+.++|..++++++.+-.. . .++...||++|...|.++.|...++++++...
T Consensus 118 ~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~P~---~----~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p 182 (287)
T 3qou_A 118 ELXAQQAMQLM-QESNYTDALPLLXDAWQLSNQ---N----GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQ 182 (287)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTS---C----HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC
T ss_pred hhHHHHHHHHH-hCCCHHHHHHHHHHHHHhCCc---c----hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhc
Confidence 45677887754 568899999999998776322 2 36788899999999998888888888766544
No 188
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=95.88 E-value=0.01 Score=52.09 Aligned_cols=135 Identities=17% Similarity=0.053 Sum_probs=87.2
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH-HhCCccc
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYE-TQLLSNL 80 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~-~~~~~~~ 80 (466)
|+.+++.+++..|. .+.++..+|.+++ ...+.++|..++++++.+. + ..+ ...+++.+.. ..+....
T Consensus 25 A~~~~~~al~~~P~---~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~---p-~~~----~~~~~~~~~~~~~~~~~~ 92 (176)
T 2r5s_A 25 ALNVIQTLSDELQS---RGDVKLAKADCLL-ETKQFELAQELLATIPLEY---Q-DNS----YKSLIAKLELHQQAAESP 92 (176)
T ss_dssp HHHHHHTSCHHHHT---SHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGG---C-CHH----HHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHCCC---cHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhcc---C-ChH----HHHHHHHHHHHhhcccch
Confidence 45566666543331 1456788888754 6789999999999985542 2 122 2333444433 2233444
Q ss_pred hhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhccc
Q psy9584 81 SKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDK 154 (466)
Q Consensus 81 ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~ 154 (466)
+...++++++..-+. ...++.+|.++...|+++.|++.++..+...-...++ .+.+.+..+...+...
T Consensus 93 a~~~~~~al~~~P~~----~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~--~a~~~l~~~~~~~g~~ 160 (176)
T 2r5s_A 93 ELKRLEQELAANPDN----FELACELAVQYNQVGRDEEALELLWNILKVNLGAQDG--EVKKTFMDILSALGQG 160 (176)
T ss_dssp HHHHHHHHHHHSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTT--HHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHhCCCC----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChH--HHHHHHHHHHHHhCCC
Confidence 678899999887544 3555678999999999999999999998887644443 3344555555555443
No 189
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.87 E-value=0.028 Score=58.52 Aligned_cols=84 Identities=10% Similarity=0.035 Sum_probs=51.5
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHH
Q psy9584 334 FFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly 413 (466)
+.+++|.+|.+++++++++.... +.++..+|.++...|++++|++....|+++. |+. ..+...+..+|
T Consensus 17 ~~~g~~~~A~~~~~~Al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~---p~~---~~~~~~lg~~~ 84 (477)
T 1wao_1 17 FKAKDYENAIKFYSQAIELNPSN------AIYYGNRSLAYLRTECYGYALGDATRAIELD---KKY---IKGYYRRAASN 84 (477)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC---TTC---HHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC---CCC---HHHHHHHHHHH
Confidence 56677777777777777654332 4456667777777777777777777666653 221 22334556666
Q ss_pred HHcCCchHHHHHHHHH
Q psy9584 414 KILNDPVRENEALQMH 429 (466)
Q Consensus 414 ~~~g~~~~~~e~~~~~ 429 (466)
...|++++|.++++.-
T Consensus 85 ~~~g~~~eA~~~~~~a 100 (477)
T 1wao_1 85 MALGKFRAALRDYETV 100 (477)
T ss_dssp HHHTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 7777777776655543
No 190
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.76 E-value=0.069 Score=41.54 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=57.8
Q ss_pred HhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHh-HHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHH
Q psy9584 329 QGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSC-SLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASA 407 (466)
Q Consensus 329 ~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~-~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~ 407 (466)
.|...+.++++.+|.++++++++..... .. ++..+|.++...|++++|.+....++.+....++ .|...
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~ 75 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTEPVG------KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPA----LQARK 75 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCSST------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTH----HHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH----HHHHH
Confidence 3444488999999999999999975443 23 6788999999999999999999999988665554 34334
Q ss_pred HHHHHHHH
Q psy9584 408 ILKDLYKI 415 (466)
Q Consensus 408 lL~~ly~~ 415 (466)
.+.+++..
T Consensus 76 ~~~~a~~~ 83 (99)
T 2kc7_A 76 MVMDILNF 83 (99)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 191
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.67 E-value=0.031 Score=58.21 Aligned_cols=101 Identities=17% Similarity=0.005 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 19 EARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 19 Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
+|.++..+|..+ ....+.++|..++++|+.+... . ..++..+|.+|...|.+..|...++++++.....
T Consensus 5 ~a~~~~~lg~~~-~~~g~~~~A~~~~~~Al~~~p~---~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~--- 73 (477)
T 1wao_1 5 RAEELKTQANDY-FKAKDYENAIKFYSQAIELNPS---N----AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY--- 73 (477)
T ss_dssp HHTTSSSSSSST-TTTTCHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---
T ss_pred HHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHhCCc---c----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---
Confidence 344455556553 4567899999999999887332 2 5788999999999999999999999999987544
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 99 HCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 99 ~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
...++.+|.++...|+++.|++.+++++++.-
T Consensus 74 -~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p 105 (477)
T 1wao_1 74 -IKGYYRRAASNMALGKFRAALRDYETVVKVKP 105 (477)
T ss_dssp -HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34566889999999999999999999998754
No 192
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.40 E-value=2.9 Score=42.96 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHH
Q psy9584 21 RTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHC 100 (466)
Q Consensus 21 ~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~ 100 (466)
.++++++.. ....+.+.|+..+++++.. .|.. ......+++.+...|.+..++.+++++++..-+...|..
T Consensus 14 ~~w~~l~~~--~~~~~~~~a~~~~e~al~~---~P~~----~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~~~lw~~ 84 (530)
T 2ooe_A 14 DAWSILIRE--AQNQPIDKARKTYERLVAQ---FPSS----GRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKC 84 (530)
T ss_dssp HHHHHHHHH--HHSSCHHHHHHHHHHHHTT---CTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred HHHHHHHHH--HHhCCHHHHHHHHHHHHHH---CCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCChHHHHH
Confidence 467778874 5578999999999998654 2323 345566888899999999999999999998766667877
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHhHHHHH
Q psy9584 101 RLIFQLAQIHAGEKDYELASSLLGVGVDYA 130 (466)
Q Consensus 101 ~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A 130 (466)
...|... ..|++..|.+.+....+-|
T Consensus 85 ~~~~~~~----~~~~~~~a~~~~~~~~~~a 110 (530)
T 2ooe_A 85 YLSYVRE----TKGKLPSYKEKMAQAYDFA 110 (530)
T ss_dssp HHHHHHH----HTTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHH----HccchhhHHHHHHHHHHHH
Confidence 6655332 2356666665444444433
No 193
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.31 E-value=0.15 Score=41.43 Aligned_cols=89 Identities=11% Similarity=0.155 Sum_probs=64.7
Q ss_pred HHhHHHhhhhcHHHHHHHHHHHHHhhhhhhh-hhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 328 VQGLQSFFQARYNEAKRYLRETLKMANAEDL-NRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 328 v~~~~~~~~~~~~eAk~~lre~lk~a~~~~l-~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
-=|-+.|.+++|.+|...|+++++....++. ..-....+..||..++.+|++++|......++.+ .|+....+-..
T Consensus 10 ~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l---~P~~~~~~~n~ 86 (104)
T 2v5f_A 10 ELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL---DPEHQRANGNL 86 (104)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHH
T ss_pred HHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---CCCCHHHHhhH
Confidence 3455668999999999999999997755431 2234456789999999999999999999999876 44444445555
Q ss_pred HHHHHHHHHcCCc
Q psy9584 407 AILKDLYKILNDP 419 (466)
Q Consensus 407 ~lL~~ly~~~g~~ 419 (466)
..++++....++.
T Consensus 87 ~~~~~~~~~~~~~ 99 (104)
T 2v5f_A 87 KYFEYIMAKEKDV 99 (104)
T ss_dssp HHHHHHHHHHCC-
T ss_pred HHHHHHHHhcccc
Confidence 6666665554443
No 194
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.21 E-value=0.094 Score=47.76 Aligned_cols=95 Identities=12% Similarity=-0.096 Sum_probs=77.1
Q ss_pred hcCCHHHHHHHHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchh---h-----------
Q psy9584 33 HTKNIDLARNHLEQAWHLSQSINA--FDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHS---I----------- 96 (466)
Q Consensus 33 ~T~N~~~A~~hLeka~~L~~~~~~--~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~---~----------- 96 (466)
.-+=++.|+.-...+..+.+.-+. -.+.+++....+|+.++..++|..|...++++|+..+.. +
T Consensus 32 d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss 111 (167)
T 3ffl_A 32 AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSAS 111 (167)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---------------
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCC
Confidence 334578888888888888776453 368999999999999999999999999999999988621 0
Q ss_pred -------hhHHHHHHHHHHHhcccccHHHHHHHHHhHH
Q psy9584 97 -------YWHCRLIFQLAQIHAGEKDYELASSLLGVGV 127 (466)
Q Consensus 97 -------~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~ 127 (466)
.=...+.|.+|.-|..-+++..|++.|+.+-
T Consensus 112 ~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip 149 (167)
T 3ffl_A 112 TPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIP 149 (167)
T ss_dssp -----CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC
T ss_pred CcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 1123688889999999999999999998753
No 195
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.55 E-value=0.91 Score=46.61 Aligned_cols=148 Identities=12% Similarity=0.144 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHhhhCCC-c-c--ccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhh
Q psy9584 284 FANLNLAIVYLRGKREGDFAALLERINPE-T-L--TSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLN 359 (466)
Q Consensus 284 ~~~lNlai~Yl~~~~~~e~~~~l~~i~~~-~-~--~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~ 359 (466)
-+-+.||-+|...++..++.+++..+.|. . + +-..+.+|.-+.++..+ .+..+.=-+...+.++-|+.+...
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~----~~~~~~~~~~~~~~~~~a~~~~r~ 95 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDM----DAGTGIEVQLCKDCIEWAKQEKRT 95 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcC----CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999988777888888888876 2 2 22345555555443322 355666677777888888877544
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQM 435 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~e~~~~~~~~s~~ 435 (466)
=|=...=+=||.+|+..|++.+|.++.....+-.++..|....+-...+-.++|...||..++..++.--......
T Consensus 96 flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~a 171 (394)
T 3txn_A 96 FLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANA 171 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhcc
Confidence 3333333579999999999999999999999999999999999999999999999999999998887765554443
No 196
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=94.19 E-value=0.21 Score=38.69 Aligned_cols=63 Identities=6% Similarity=-0.077 Sum_probs=53.3
Q ss_pred HHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 66 SVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 66 slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
..+|.+|...|.+..+...++++++.....+. ..++.+|.++...|++..|++.++.+++..-
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKD---EAYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 45789999999999999999999998754421 2667899999999999999999999998754
No 197
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.40 E-value=0.3 Score=39.42 Aligned_cols=79 Identities=15% Similarity=-0.012 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhh
Q psy9584 21 RTHLQLGNILLTHTKN--IDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYW 98 (466)
Q Consensus 21 ~~rLrla~lL~~~T~N--~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W 98 (466)
-....+|..|+...+. .++|+.+|++|+.+-.. -..+..+||..+++.|++..+...+++.++.... ..|
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-------~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~-~~~ 78 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-------NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP-NLD 78 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT-TCC
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-Ccc
Confidence 4566778777554443 78899999998775322 2467788888899888888888888888877655 456
Q ss_pred HHHHHHHHH
Q psy9584 99 HCRLIFQLA 107 (466)
Q Consensus 99 ~~~~~fqLA 107 (466)
.--+.-.++
T Consensus 79 ~~~i~~~I~ 87 (93)
T 3bee_A 79 RVTIIESIN 87 (93)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 544444443
No 198
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.38 E-value=0.58 Score=37.81 Aligned_cols=75 Identities=15% Similarity=0.053 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchh
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHS 95 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~ 95 (466)
+.-++.||..++ ...++.+|..-+++|+......+.-...+-.....||.+|.+.|.+..|...+++++++.-+.
T Consensus 5 a~dc~~lG~~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 5 AEDCFELGKVAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 566889998854 567899999999999887654332233566778999999999999999999999999887544
No 199
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.69 E-value=0.3 Score=43.93 Aligned_cols=82 Identities=20% Similarity=0.251 Sum_probs=55.8
Q ss_pred cchhHHHhhcCCCChhHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q psy9584 2 CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHT---------KNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELY 72 (466)
Q Consensus 2 ai~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T---------~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y 72 (466)
|++|++.+++.+|. .+.++.++|.+|...- +.+++|...|++|+.+-.. ..++++.|+.+|
T Consensus 21 A~~~~~~Ai~l~P~---~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-------~~~A~~~LG~ay 90 (158)
T 1zu2_A 21 IRQDAENTYKSNPL---DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-------KDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC---CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-------cHHHHHHHHHHH
Confidence 67788777766653 2346667777766542 2367999999999887333 345788899999
Q ss_pred HHhC-----------CccchhHHHHHHHHhhc
Q psy9584 73 ETQL-----------LSNLSKPILRRAIELSQ 93 (466)
Q Consensus 73 ~~~~-----------~~~~ak~~l~k~i~~s~ 93 (466)
...| .+..|...+++++++--
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P 122 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQP 122 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCC
Confidence 9875 45556666666666653
No 200
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=92.60 E-value=0.7 Score=45.33 Aligned_cols=97 Identities=12% Similarity=-0.073 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhH
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWH 99 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~ 99 (466)
-..++.+|.+| ....++++|+..++.... -...+. +++.+|.++++.+.++.++..+++++... .+.-.
T Consensus 102 ~dl~LayA~~L-~~~g~y~eA~~~l~~~~~-------~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~--d~~~~ 170 (282)
T 4f3v_A 102 LAITMGFAACE-AAQGNYADAMEALEAAPV-------AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWP--DKFLA 170 (282)
T ss_dssp HHHHHHHHHHH-HHHTCHHHHHHHHTSSCC-------TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCS--CHHHH
T ss_pred hHHHHHHHHHH-HHCCCHHHHHHHHHHHHh-------cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccC--CcccH
Confidence 44455566654 456689999998886321 123444 89999999999999999999887554433 23334
Q ss_pred HHHHHHHHHHhcccccHHHHHHHHHhHH
Q psy9584 100 CRLIFQLAQIHAGEKDYELASSLLGVGV 127 (466)
Q Consensus 100 ~~~~fqLA~i~~~~~D~~~A~~~L~~g~ 127 (466)
....+.|+.++...|++..|++.|++..
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 5677889999999999999999999876
No 201
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=92.53 E-value=2.5 Score=41.89 Aligned_cols=127 Identities=8% Similarity=-0.001 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhCCCchHHHHHHhhh-CCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhh---hhhhh
Q psy9584 285 ANLNLAIVYLRGKREGDFAALLERI-NPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANA---EDLNR 360 (466)
Q Consensus 285 ~~lNlai~Yl~~~~~~e~~~~l~~i-~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~---~~l~~ 360 (466)
..+.+|.+|...|+..+....+.+. ++.. ....+.+-+..|+-+ ...||+++|++.+++..++..+ .+..-
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~---~~~~lea~~l~vqi~--L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~ 176 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDE---AEGTTELLLLAIEVA--LLNNNVSTASTIFDNYTNAIEDTVSGDNEM 176 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSC---STTHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCC---CcCcHHHHHHHHHHH--HHCCCHHHHHHHHHHHHhcCccccccchHH
Confidence 3457888888877555555555443 2210 124444444344434 6799999999999998775431 12222
Q ss_pred HHHhHHHHHHHHHHhcC--ChHHHHHhhHHHHHHhhcCCChhHHHHHH-HHHHHHHHHcCCchHHHHHHH
Q psy9584 361 LTSCSLVLLGHIFLSLG--NHRESMNMVTPAMQLASKIPDVHVQLWAS-AILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 361 l~~~~l~llg~i~l~~~--~~~ea~~~~~~a~~lAkK~~D~~~qlw~~-~lL~~ly~~~g~~~~~~e~~~ 427 (466)
+ ..+.-||+.+..| ++++|...... ++.+-|| |.+ .+|-.++..+|+++.|.+..+
T Consensus 177 l---~~Laea~v~l~~g~~~~q~A~~~f~E---l~~~~p~-----~~~~~lLln~~~~~g~~~eAe~~L~ 235 (310)
T 3mv2_B 177 I---LNLAESYIKFATNKETATSNFYYYEE---LSQTFPT-----WKTQLGLLNLHLQQRNIAEAQGIVE 235 (310)
T ss_dssp H---HHHHHHHHHHHHTCSTTTHHHHHHHH---HHTTSCS-----HHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred H---HHHHHHHHHHHhCCccHHHHHHHHHH---HHHhCCC-----cccHHHHHHHHHHcCCHHHHHHHHH
Confidence 2 3445688888777 89999888887 5788888 222 222228999999999988765
No 202
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.27 E-value=0.37 Score=43.34 Aligned_cols=85 Identities=8% Similarity=0.083 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCcc----------chhHHHHHHHHhhchhhhhHHHHHHH
Q psy9584 36 NIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSN----------LSKPILRRAIELSQHSIYWHCRLIFQ 105 (466)
Q Consensus 36 N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~----------~ak~~l~k~i~~s~~~~~W~~~~~fq 105 (466)
-+++|...+++++.+-.. . .++...++.++...+.+. .|+..++++|++.-+. ...++.
T Consensus 17 ~feeA~~~~~~Ai~l~P~---~----aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~----~~A~~~ 85 (158)
T 1zu2_A 17 LFEQIRQDAENTYKSNPL---D----ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK----DEAVWC 85 (158)
T ss_dssp HHHHHHHHHHHHHHHCTT---C----HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC----HHHHHH
T ss_pred HHHHHHHHHHHHHHHCCC---C----HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc----HHHHHH
Confidence 367788888888776322 2 356777788888877543 6778888888887543 344557
Q ss_pred HHHHhccc-----------ccHHHHHHHHHhHHHHHH
Q psy9584 106 LAQIHAGE-----------KDYELASSLLGVGVDYAN 131 (466)
Q Consensus 106 LA~i~~~~-----------~D~~~A~~~L~~g~~~A~ 131 (466)
|+.++... |||+.|++.+++++++.-
T Consensus 86 LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P 122 (158)
T 1zu2_A 86 IGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQP 122 (158)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCC
Confidence 88888766 489999999999888754
No 203
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=92.02 E-value=2.1 Score=38.91 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=70.0
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhh-hh--hhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHH--------
Q psy9584 334 FFQARYNEAKRYLRETLKMANAE-DL--NRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQ-------- 402 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~-~l--~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~q-------- 402 (466)
+..+-|+.|.-...-.+.+++.. +. ...-..+++.+|+.++..|+++.|++..+.|++.-+.++....-
T Consensus 31 ~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~s 110 (167)
T 3ffl_A 31 AAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSA 110 (167)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccC
Confidence 67889999999999988888654 33 78888899999999999999999999999999999987654210
Q ss_pred -----------HHHHHHHHHHHHHcCCchHHHHH
Q psy9584 403 -----------LWASAILKDLYKILNDPVRENEA 425 (466)
Q Consensus 403 -----------lw~~~lL~~ly~~~g~~~~~~e~ 425 (466)
.-.-=-++..|...|+++.|...
T Consensus 111 s~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~ 144 (167)
T 3ffl_A 111 STPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAI 144 (167)
T ss_dssp ------CCCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCcccccccchHHHHHHHHHHHHHHCCHHHHHHH
Confidence 01112356788888888888554
No 204
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.89 E-value=7.8 Score=39.92 Aligned_cols=201 Identities=13% Similarity=0.076 Sum_probs=114.4
Q ss_pred hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhh
Q psy9584 94 HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENW 173 (466)
Q Consensus 94 ~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~ 173 (466)
....|..+..-++..++...|||+...+.+.. +..++|-..-.+--.+-.++-.+...+..+.+.-+..+..+...-
T Consensus 50 ~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~---Lskkr~qlk~ai~~~V~~~~~~l~~~~~~d~~~~~~~i~~l~~vt 126 (445)
T 4b4t_P 50 SDLASSKEVLAKIVDLLASRNKWDDLNEQLTL---LSKKHGQLKLSIQYMIQKVMEYLKSSKSLDLNTRISVIETIRVVT 126 (445)
T ss_dssp CSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHH---HHTTTTTSHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHCCSSSS
T ss_pred cchhhHHHHHHHHHHHHHHhccHHHHHHHHHH---HHHHhhhhHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHh
Confidence 34589999999999999999999988776654 444566654444444444443443333222333344444444432
Q ss_pred ccccchHh--hHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCccCCCCCCcccccCcchhHHHHHH
Q psy9584 174 TGSQYQKE--YLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVY 251 (466)
Q Consensus 174 ~g~~~~~e--~L~~~~~~L~i~~~l~~g~v~~~k~~lkqLq~~~q~i~~~~w~~~~~~~~~~~~~~f~WLpk~~l~aLvy 251 (466)
.|.- +.| .-++-....+ -+...|++..+...|.+|+.. +...
T Consensus 127 e~ki-flE~erarl~~~La~--i~e~~g~~~eA~~iL~~l~~E--t~~~------------------------------- 170 (445)
T 4b4t_P 127 ENKI-FVEVERARVTKDLVE--IKKEEGKIDEAADILCELQVE--TYGS------------------------------- 170 (445)
T ss_dssp SCCC-CCCHHHHHHHHHHHH--HHHHHTCHHHHHHHHHHHHHH--HCSS-------------------------------
T ss_pred ccch-HHHHHHHHHHHHHHH--HHHHccCHHHHHHHHHHHHHH--HHhc-------------------------------
Confidence 2321 222 2222222122 245588899999999888733 3111
Q ss_pred HHHHhhhhhHHHhcCchhhHHhhhhcchhhHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCcc-ccccchhhHHHHHHHh
Q psy9584 252 LVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREGDFAALLERINPETL-TSHSHSLRAAAYYVQG 330 (466)
Q Consensus 252 l~tv~~~lk~Flv~G~~~~eAl~~~~~~~~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~-~~~~~~L~a~~~yv~~ 330 (466)
.++....-+.+-..-+|+..+.-......+.++++..+ ..+...+++.++...|
T Consensus 171 -------------------------~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~ 225 (445)
T 4b4t_P 171 -------------------------MEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLV 225 (445)
T ss_dssp -------------------------SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred -------------------------ccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHH
Confidence 12333333333344445543322222222333322211 2345678899988899
Q ss_pred HHHhhhhcHHHHHHHHHHHHHhhhhhhh
Q psy9584 331 LQSFFQARYNEAKRYLRETLKMANAEDL 358 (466)
Q Consensus 331 ~~~~~~~~~~eAk~~lre~lk~a~~~~l 358 (466)
....+.++|.+|-++|.++.......+.
T Consensus 226 ~~~~~e~~y~~a~~~y~e~~~~~~~~~d 253 (445)
T 4b4t_P 226 KISLHKREYLEVAQYLQEIYQTDAIKSD 253 (445)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhhhHHHHHHHHHHHHhcccccCC
Confidence 9889999999999999999987665544
No 205
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.26 E-value=0.73 Score=37.03 Aligned_cols=65 Identities=12% Similarity=0.001 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhCC---ccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 63 EAASVLAELYETQLL---SNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 63 ~a~slLa~~y~~~~~---~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
+....+|++++..+. .+.++.+++++++.-.+. -+.++.+|.++..+|||..|++.+++.++..-
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~----~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN----EAALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 345667777766553 578999999999988554 67777889999999999999999999876544
No 206
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=90.84 E-value=4 Score=40.38 Aligned_cols=118 Identities=12% Similarity=0.016 Sum_probs=86.8
Q ss_pred HHhhcCCCChhHHHHHHHHHHHHHHHh-cCC-------HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh---
Q psy9584 7 QAVFNFKPPPRVEARTHLQLGNILLTH-TKN-------IDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQ--- 75 (466)
Q Consensus 7 eAvl~~~~~p~~Ea~~rLrla~lL~~~-T~N-------~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~--- 75 (466)
.+++..--++.+|+..-.-++..-+.- ..+ ...|+..+|||+.|= ++|.+. .++..|+.+|.+.
T Consensus 141 ~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLD---P~~~~G--sA~~~LG~lY~~vPp~ 215 (301)
T 3u64_A 141 HKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLW---PSYQEG--AVWNVLTKFYAAAPES 215 (301)
T ss_dssp HHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHC---TTHHHH--HHHHHHHHHHHHSCTT
T ss_pred HHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhC---CCcccC--HHHHHHHHHHHhCCCc
Confidence 455655558899999999888764333 222 578999999998873 334443 5788999999995
Q ss_pred --CCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhccc-ccHHHHHHHHHhHHHHHHH
Q psy9584 76 --LLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGE-KDYELASSLLGVGVDYANI 132 (466)
Q Consensus 76 --~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~-~D~~~A~~~L~~g~~~A~~ 132 (466)
|+...++..++++++++-+.. ...++ -.|+.++.+ ||++.|.+.|++++...-+
T Consensus 216 ~gGd~ekA~~~ferAL~LnP~~~-id~~v--~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 216 FGGGMEKAHTAFEHLTRYCSAHD-PDHHI--TYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp TTCCHHHHHHHHHHHHHHCCTTC-SHHHH--HHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred cCCCHHHHHHHHHHHHHhCCCCC-chHHH--HHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 889999999999999996321 11222 247888775 9999999999998775543
No 207
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.17 E-value=3 Score=42.48 Aligned_cols=83 Identities=13% Similarity=0.075 Sum_probs=65.3
Q ss_pred HHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCchHHH
Q psy9584 344 RYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVREN 423 (466)
Q Consensus 344 ~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~~~~ 423 (466)
.-++.+++.+.+.++....+.++..++..++..|+.++|...+..|+.+- |+ ..+..++..++...|++++|.
T Consensus 258 ~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln---~s----~~a~~llG~~~~~~G~~~eA~ 330 (372)
T 3ly7_A 258 AALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE---MS----WLNYVLLGKVYEMKGMNREAA 330 (372)
T ss_dssp HHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC---CC----HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC---CC----HHHHHHHHHHHHHCCCHHHHH
Confidence 44556666444556667777888899999999999999999999999994 55 235578899999999999999
Q ss_pred HHHHHHHHHH
Q psy9584 424 EALQMHCNFS 433 (466)
Q Consensus 424 e~~~~~~~~s 433 (466)
|.+..-..++
T Consensus 331 e~~~~AlrL~ 340 (372)
T 3ly7_A 331 DAYLTAFNLR 340 (372)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhcC
Confidence 9887655543
No 208
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=89.81 E-value=1.1 Score=45.65 Aligned_cols=76 Identities=17% Similarity=0.364 Sum_probs=62.7
Q ss_pred HHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHH
Q psy9584 323 AAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQ 402 (466)
Q Consensus 323 a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~q 402 (466)
+.++-+.|+..+.+|++.+|.++++.++.+.+ ...+++++|.++...|+.++|......|+.+ .|...+-
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-------s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL---~P~~~t~ 346 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEM-------SWLNYVLLGKVYEMKGMNREAADAYLTAFNL---RPGANTL 346 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---SCSHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---CCCcChH
Confidence 44445567777889999999999999999842 2668899999999999999999999999988 6777777
Q ss_pred HHHHHH
Q psy9584 403 LWASAI 408 (466)
Q Consensus 403 lw~~~l 408 (466)
.|+..+
T Consensus 347 ~~~~~l 352 (372)
T 3ly7_A 347 YWIENG 352 (372)
T ss_dssp HHHHHS
T ss_pred HHHhCc
Confidence 777643
No 209
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=89.52 E-value=2.9 Score=35.26 Aligned_cols=82 Identities=15% Similarity=0.170 Sum_probs=64.5
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHh----cCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHH
Q psy9584 334 FFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLS----LGNHRESMNMVTPAMQLASKIPDVHVQLWASAIL 409 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~----~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL 409 (466)
.....+++|.++++++.+..+ +.+...||.+|.. .+|.++|.+..+.|.+. .+. .+..-|
T Consensus 36 ~~g~~~~~A~~~~~~Aa~~g~--------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~----g~~----~a~~~L 99 (138)
T 1klx_A 36 NSQINKQKLFQYLSKACELNS--------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL----NDQ----DGCLIL 99 (138)
T ss_dssp CTTSCHHHHHHHHHHHHHTTC--------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT----TCH----HHHHHH
T ss_pred HcCCCHHHHHHHHHHHHcCCC--------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC----CCH----HHHHHH
Confidence 445677889999999987532 3567789999998 89999999999998754 553 455667
Q ss_pred HHHHHH----cCCchHHHHHHHHHHH
Q psy9584 410 KDLYKI----LNDPVRENEALQMHCN 431 (466)
Q Consensus 410 ~~ly~~----~g~~~~~~e~~~~~~~ 431 (466)
..+|.. .+|+++|.++++.-..
T Consensus 100 g~~y~~G~g~~~d~~~A~~~~~~Aa~ 125 (138)
T 1klx_A 100 GYKQYAGKGVVKNEKQAVKTFEKACR 125 (138)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCcCHHHHHHHHHHHHH
Confidence 788888 8899999998876544
No 210
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.42 E-value=1.4 Score=45.20 Aligned_cols=101 Identities=12% Similarity=0.025 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHH
Q psy9584 61 KFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRV 140 (466)
Q Consensus 61 K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~ 140 (466)
...+..-||+.|+..|++..|...+.+..+...+. .=.-.+++....++...+||..+..++.++-......+|+..+.
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~-~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~ 208 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAIST-GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRN 208 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC-CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh-HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHH
Confidence 55677889999999999999999999988776532 22356777888888999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcccCccHHHHH
Q psy9584 141 LFLLSRCMLLLIDKKVNDAVQL 162 (466)
Q Consensus 141 lf~ls~~~~ll~~~~~~~v~~a 162 (466)
-+....++++|..++.......
T Consensus 209 ~lk~~~gl~~l~~r~f~~Aa~~ 230 (429)
T 4b4t_R 209 RYKTYYGIHCLAVRNFKEAAKL 230 (429)
T ss_dssp HHHHHHHHGGGGTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhChHHHHHHH
Confidence 8888888888887777655443
No 211
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=86.26 E-value=11 Score=39.33 Aligned_cols=156 Identities=11% Similarity=0.062 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHhccccc---------hHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc-------hhhhhHH
Q psy9584 37 IDLARNHLEQAWHLSQSINAF---------DDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ-------HSIYWHC 100 (466)
Q Consensus 37 ~~~A~~hLeka~~L~~~~~~~---------~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~-------~~~~W~~ 100 (466)
.++|-..+.|+-.+|....+- -.+-+-....|-++|++.|....+|++++. ++.+. ...-=..
T Consensus 142 le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~-i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 142 LSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKN-FQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHT-HHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHH-hccCCCCcChhhCCccceE
Confidence 667777788887776653221 123344445566999999999999998855 33332 1223446
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHhHHHH-HHHh-cC-----hHHHHHHHHHHHHHHhcccCccHHHHHHHHHhhHhhhh
Q psy9584 101 RLIFQLAQIHAGEKDYELASSLLGVGVDY-ANIS-NA-----QYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENW 173 (466)
Q Consensus 101 ~~~fqLA~i~~~~~D~~~A~~~L~~g~~~-A~~~-~d-----~~~~~lf~ls~~~~ll~~~~~~~v~~al~~~~~l~~~~ 173 (466)
+|++-+|.+++.++||..|.+.|..+... +.+. +. ..-.++--+.=+.++|..-...++ ...
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n~~~ILkyLIpv~LLlG~~P~~~l----------l~k- 289 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMVKWGP----------LRP- 289 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHTTCCBCHHH----------HGG-
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhHHHHHHHHHHHHHHHcCCCCCHHH----------Hcc-
Confidence 77778899999999999999999999998 7753 11 112233333333334443222211 111
Q ss_pred ccccchHhhHHH-HHHHHHHHhhhhhhhhhhhhHHHHHH
Q psy9584 174 TGSQYQKEYLKV-FFLVLQVCHYLMAGQVKSVKPCLKQL 211 (466)
Q Consensus 174 ~g~~~~~e~L~~-~~~~L~i~~~l~~g~v~~~k~~lkqL 211 (466)
|.. +.|.- |.. ++..+..|+++.-...+++-
T Consensus 290 ---~~~-~~L~~~y~~---L~~AVr~Gdl~~F~~~L~~~ 321 (455)
T 3t5v_B 290 ---FLS-QETIDNWSV---LYKHVRYGNIQGVSLWLRQN 321 (455)
T ss_dssp ---GSC-HHHHHHHHH---HHHHHHHTCHHHHHHHHHHT
T ss_pred ---cch-HHHHHHHHH---HHHHHHhCCHHHHHHHHHHh
Confidence 111 34543 554 77788999987777776543
No 212
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.58 E-value=6.1 Score=41.97 Aligned_cols=75 Identities=15% Similarity=0.113 Sum_probs=60.8
Q ss_pred chHHHHHHHHHHHHHHHHhCCccchhHHHHHHH--HhhchhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHH
Q psy9584 57 FDDVKFEAASVLAELYETQLLSNLSKPILRRAI--ELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANI 132 (466)
Q Consensus 57 ~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i--~~s~~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~ 132 (466)
-.+.+.....+|-|.|...+.+..|..++.|+. +...++.-| ++|+|=+|-+++.++||..|.+.|..++.-|-+
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~-~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLE-ARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHH-HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 456888889999999999999999999999873 221234344 888888999999999999999999888776543
No 213
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.85 E-value=2.2 Score=43.80 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhH
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWH 99 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~ 99 (466)
++++..+|.+++ ...|.+.|...+++...-|... +-|.++...+.+++...+++..++..+.|+-..-.....|.
T Consensus 131 ~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~----~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~ 205 (429)
T 4b4t_R 131 AQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAIST----GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWE 205 (429)
T ss_dssp SSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCC----CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCCh----HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHH
Confidence 357888999876 6788999999999988876553 56889999999999999999999999999877665444565
Q ss_pred HHHHH--HHHHHhcccccHHHHHHHHHhHHHHHHHhc
Q psy9584 100 CRLIF--QLAQIHAGEKDYELASSLLGVGVDYANISN 134 (466)
Q Consensus 100 ~~~~f--qLA~i~~~~~D~~~A~~~L~~g~~~A~~~~ 134 (466)
-+-.+ .-|-++...+||..|.+.+-.........+
T Consensus 206 ~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~~~e 242 (429)
T 4b4t_R 206 RRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSIE 242 (429)
T ss_dssp HHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCCccc
Confidence 54444 456777899999999998877665544333
No 214
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=83.49 E-value=11 Score=39.31 Aligned_cols=82 Identities=17% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHHHHH
Q psy9584 27 GNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQL 106 (466)
Q Consensus 27 a~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~fqL 106 (466)
.+.|++...|.++|..+.++. + -+ +.-+.||+.+.+.|.+..|...+.++-. +..++..
T Consensus 9 ~~~ll~~~~~ld~A~~fae~~-------~-~~----~vWs~La~A~l~~g~~~eAIdsfika~D---------~~~y~~V 67 (449)
T 1b89_A 9 VQVLIEHIGNLDRAYEFAERC-------N-EP----AVWSQLAKAQLQKGMVKEAIDSYIKADD---------PSSYMEV 67 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHccCHHHHHHHHHhC-------C-Ch----HHHHHHHHHHHHcCCHHHHHHHHHcCCC---------HHHHHHH
Confidence 367888889999999999884 1 11 4888999999999988777776765421 1123345
Q ss_pred HHHhcccccHHHHHHHHHhHHHH
Q psy9584 107 AQIHAGEKDYELASSLLGVGVDY 129 (466)
Q Consensus 107 A~i~~~~~D~~~A~~~L~~g~~~ 129 (466)
+......|+|+.|+++|++..+.
T Consensus 68 ~~~ae~~g~~EeAi~yl~~ark~ 90 (449)
T 1b89_A 68 VQAANTSGNWEELVKYLQMARKK 90 (449)
T ss_dssp -----------------------
T ss_pred HHHHHhCCCHHHHHHHHHHHHHh
Confidence 66677789999999999987764
No 215
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=79.13 E-value=7.9 Score=34.40 Aligned_cols=28 Identities=25% Similarity=0.115 Sum_probs=16.7
Q ss_pred HHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 104 FQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 104 fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
+.||-.|...|||..|.++++..+++--
T Consensus 75 Y~LAv~~~kl~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 75 FYLAVGNYRLKEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 3455555666666666666666665544
No 216
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=73.10 E-value=6.2 Score=39.01 Aligned_cols=76 Identities=12% Similarity=-0.005 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh-CCccchhHHHHHHHHh
Q psy9584 17 RVEARTHLQLGNILLTH----TKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQ-LLSNLSKPILRRAIEL 91 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~----T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~-~~~~~ak~~l~k~i~~ 91 (466)
-....+|.=+|.++..- ..|.+.|+.|++||+.+...++ .......|+.++.. |.++.++..|.+++..
T Consensus 196 ~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~------id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 196 YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD------PDHHITYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC------SHHHHHHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC------chHHHHHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 34677888899884332 4799999999999999866431 34667789999884 8899999999999997
Q ss_pred hchh-hhh
Q psy9584 92 SQHS-IYW 98 (466)
Q Consensus 92 s~~~-~~W 98 (466)
--+. |.|
T Consensus 270 ~p~~~P~~ 277 (301)
T 3u64_A 270 DPESVPHN 277 (301)
T ss_dssp CGGGCSSC
T ss_pred CCCCCCCh
Confidence 7543 555
No 217
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=72.71 E-value=5.6 Score=35.73 Aligned_cols=68 Identities=21% Similarity=0.209 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ 93 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~ 93 (466)
+--++.-+++|-. +...|+++||..++.++.++++ | -|+. -+-|+.=.++|....|+.+|.++|++..
T Consensus 58 rrYI~LWIrYA~~--~ei~D~d~aR~vy~~a~~~hKk---F--AKiw--i~~AqFEiRqgnl~kARkILg~AiG~~~ 125 (161)
T 4h7y_A 58 ESFARIQVRFAEL--KAIQEPDDARDYFQMARANCKK---F--AFVH--ISFAQFELSQGNVKKSKQLLQKAVERGA 125 (161)
T ss_dssp HHHHHHHHHHHHH--HHHHCGGGCHHHHHHHHHHCTT---B--HHHH--HHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHhHH---H--HHHH--HHHHHHHHHcccHHHHHHHHHHHhccCC
Confidence 4456777888844 7779999999999999887333 6 3333 3345666668888888888888888764
No 218
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=65.02 E-value=92 Score=30.62 Aligned_cols=145 Identities=10% Similarity=-0.016 Sum_probs=65.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHHHHH
Q psy9584 24 LQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLI 103 (466)
Q Consensus 24 Lrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~~~~ 103 (466)
-||..|+=....+...=++.+.+|+.-+.+...+.-+--+.+.++|..|...|.+.
T Consensus 96 ~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~------------------------ 151 (312)
T 2wpv_A 96 ARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVY------------------------ 151 (312)
T ss_dssp HHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHH------------------------
T ss_pred HHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHH------------------------
Confidence 34445544433333333455555555444433333344455555555555443221
Q ss_pred HHHHHHhcccccHHHHHHHHHhHHHHHHHh--cChHHHHHHHHHHHHH-HhcccCccHHHHHHHHH-hhHhh-------h
Q psy9584 104 FQLAQIHAGEKDYELASSLLGVGVDYANIS--NAQYTRVLFLLSRCML-LLIDKKVNDAVQLLTQA-GYQVE-------N 172 (466)
Q Consensus 104 fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~--~d~~~~~lf~ls~~~~-ll~~~~~~~v~~al~~~-~~l~~-------~ 172 (466)
.|+-|..-++.+++....+.-.+...+. |.+.-.-+| ++++-+ .|.-.+......++..- .++.. .
T Consensus 152 --~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf-~~RaVL~yL~l~n~~~A~~~~~~f~~~~~~~~~~~~~~ 228 (312)
T 2wpv_A 152 --EAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEF-FSRLVFNYLFISNISFAHESKDIFLERFIEKFHPKYEK 228 (312)
T ss_dssp --HHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHH-HHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred --HHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhccccccc
Confidence 1222222232323333334444554444 666555555 666654 44333333333333321 22211 1
Q ss_pred h----ccccc--hHhhHHHHHHHHHHHhh
Q psy9584 173 W----TGSQY--QKEYLKVFFLVLQVCHY 195 (466)
Q Consensus 173 ~----~g~~~--~~e~L~~~~~~L~i~~~ 195 (466)
+ .+.|. ..+.|.+..+++.+|..
T Consensus 229 ~~~~~~~~~~~p~~pllnF~~lLl~t~e~ 257 (312)
T 2wpv_A 229 IDKNGYEIVFFEDYSDLNFLQLLLITCQT 257 (312)
T ss_dssp EEETTEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCCCccHHHHHHHHHHHhc
Confidence 1 23333 24789998888888853
No 219
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=63.14 E-value=22 Score=31.80 Aligned_cols=89 Identities=7% Similarity=0.076 Sum_probs=64.3
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhh--hhhhHHHhHH-HHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAE--DLNRLTSCSL-VLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQL 403 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~--~l~~l~~~~l-~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~ql 403 (466)
|..|+..|..++|=+|=+.|.+.=+-+... +-.-+.+... +--|...++.||.+-|..++..|...-++.++...-+
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~~~~GI 115 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPNDYYGV 115 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCTTGGGB
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCccCCc
Confidence 677788899999999999999998876555 3233444444 4456667788999999999999999877777654444
Q ss_pred HHHHHHHHHHHH
Q psy9584 404 WASAILKDLYKI 415 (466)
Q Consensus 404 w~~~lL~~ly~~ 415 (466)
-...+...+-..
T Consensus 116 Dv~~L~~~~~~~ 127 (161)
T 2ijq_A 116 DLLDVRTTVTNA 127 (161)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 444555444433
No 220
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=62.70 E-value=27 Score=28.30 Aligned_cols=84 Identities=18% Similarity=0.144 Sum_probs=62.5
Q ss_pred HHHhHHHhhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHH
Q psy9584 327 YVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWAS 406 (466)
Q Consensus 327 yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~ 406 (466)
|..|+..|..++|=+|=+.+.+.=+-++..+-.-+.+...+--|...++.||. |..++..|...-++.|+..--+-..
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~~~~gidv~ 82 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPCPLMGLDWR 82 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCSSBTTBCHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCCccCCcCHH
Confidence 45566669999999999999999998865555556666667777777788888 9999999999777777654334444
Q ss_pred HHHHHH
Q psy9584 407 AILKDL 412 (466)
Q Consensus 407 ~lL~~l 412 (466)
.+.+.+
T Consensus 83 ~L~~~~ 88 (94)
T 2cwy_A 83 SLLQEA 88 (94)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 221
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.34 E-value=62 Score=32.55 Aligned_cols=101 Identities=12% Similarity=-0.019 Sum_probs=72.9
Q ss_pred HHhcCCHHHHHHHHHHHHHHHhc----------cccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc---h-hh
Q psy9584 31 LTHTKNIDLARNHLEQAWHLSQS----------INAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ---H-SI 96 (466)
Q Consensus 31 ~~~T~N~~~A~~hLeka~~L~~~----------~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~---~-~~ 96 (466)
....++.++|.++|++......+ .....+........++++|...|+.+.++.+++++-..-. + .+
T Consensus 86 ~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~ 165 (393)
T 4b4t_O 86 LKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPL 165 (393)
T ss_dssp HHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSS
T ss_pred HhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccH
Confidence 46678899999999975332111 1123355677778899999999999999999999765443 1 34
Q ss_pred hhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 97 YWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 97 ~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
.-+.+|+...+..|..++||..+....-..+....
T Consensus 166 ~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~ 200 (393)
T 4b4t_O 166 RITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLE 200 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcc
Confidence 56788888889999999999987666555555444
No 222
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=61.77 E-value=30 Score=31.03 Aligned_cols=112 Identities=21% Similarity=0.268 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcH-HHHHHHHHHHHHhhhhhhhh
Q psy9584 281 LWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARY-NEAKRYLRETLKMANAEDLN 359 (466)
Q Consensus 281 ~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~-~eAk~~lre~lk~a~~~~l~ 359 (466)
--+++..|.+ |++.. =......++.++|+.+|...+++ =|+.||.+- ++ .+-|..+-+++.+-
T Consensus 9 q~a~i~a~~a--fl~~d-Ys~VI~~L~~~~~~~Lp~~~kY~-LA~SYI~~e------~Ls~eQKenIln~itlk------ 72 (161)
T 2ynq_A 9 QEAYIQSTEL--FLQNK-YSDVITTLEDYAPEDMPYVIQYE-LASSYVMTE------SLTEEQRQTVSNNITLK------ 72 (161)
T ss_dssp HHHHHHHHHH--HTTTC-HHHHHHHHTTSCGGGSCHHHHHH-HHHHHHHTS------SSCHHHHHHHHHTCCTT------
T ss_pred HHHHHHHHHH--HHHhh-HHHHHHHHhcCChhhCChhHHHH-HHHHHHHcc------CCCHHHHHHHHhhCCcc------
Confidence 3344444432 44443 23455666888888998888887 555575542 22 34455554444422
Q ss_pred hHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHHcCCch
Q psy9584 360 RLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPV 420 (466)
Q Consensus 360 ~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~~g~~~ 420 (466)
+--..|+=||++..|++++| +++|+.+.|...++. ++++..-.-.+|+.
T Consensus 73 ---Sde~yL~YWIyiGRg~~~eA-------lDiA~~L~D~qLily--Al~K~~~~vk~d~~ 121 (161)
T 2ynq_A 73 ---TDEQYMLYWIYIGRSQSEEA-------LELARTIEDRDLIVY--ALLKYREQIKGDTD 121 (161)
T ss_dssp ---SCHHHHHHHHHHHHTCHHHH-------HHHHHHHTCHHHHHH--HHHHHHHHHHTCSS
T ss_pred ---CCHHHHHHHHHHcCCchHHH-------HHHHHhcCcHHHHHH--HHHHHHHHHhcCCC
Confidence 33356888999999998876 567899999955555 45555555555544
No 223
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=58.29 E-value=1e+02 Score=27.53 Aligned_cols=108 Identities=13% Similarity=0.075 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhcCCH------HHHHHHHHHHHHHHhccc-cchH--HHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc
Q psy9584 23 HLQLGNILLTHTKNI------DLARNHLEQAWHLSQSIN-AFDD--VKFEAASVLAELYETQLLSNLSKPILRRAIELSQ 93 (466)
Q Consensus 23 rLrla~lL~~~T~N~------~~A~~hLeka~~L~~~~~-~~~d--~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~ 93 (466)
.+-+..+| +-..|+ ++-+..+|||+.-..+.. ++-+ +.....+. . |...++.+.++++++.++..-+
T Consensus 16 W~~yl~ll-E~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA--~-~~ei~D~d~aR~vy~~a~~~hK 91 (161)
T 4h7y_A 16 WLSLLLKL-EKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFA--E-LKAIQEPDDARDYFQMARANCK 91 (161)
T ss_dssp HHHHHHHH-HHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHH--H-HHHHHCGGGCHHHHHHHHHHCT
T ss_pred HHHHHHHH-HHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHH--H-HHHhcCHHHHHHHHHHHHHHhH
Confidence 34444443 333666 788889999988433321 1111 11111111 1 1233678889999999998732
Q ss_pred hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHH
Q psy9584 94 HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLF 142 (466)
Q Consensus 94 ~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf 142 (466)
. + ..+...-|+.-..+||...|.++|+.++. .+.+..+++-
T Consensus 92 k--F--AKiwi~~AqFEiRqgnl~kARkILg~AiG----~~~k~~~~le 132 (161)
T 4h7y_A 92 K--F--AFVHISFAQFELSQGNVKKSKQLLQKAVE----RGAVPLEMLE 132 (161)
T ss_dssp T--B--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCBCHHHHH
T ss_pred H--H--HHHHHHHHHHHHHcccHHHHHHHHHHHhc----cCCCcHHHHH
Confidence 2 2 34444556666779999999999999988 3444444443
No 224
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=57.71 E-value=33 Score=30.34 Aligned_cols=84 Identities=13% Similarity=-0.014 Sum_probs=49.2
Q ss_pred HHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccc---------------c--chHHHHHHHHHHH
Q psy9584 7 QAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSIN---------------A--FDDVKFEAASVLA 69 (466)
Q Consensus 7 eAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~---------------~--~~d~K~~a~slLa 69 (466)
|+++....+|..=.+++-++-+.+- -.. ...++.++-||.|+++.+ . .++-+-+..+.||
T Consensus 2 e~~l~~~l~~~~l~~~~~~y~~e~~-~~~--~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LA 78 (152)
T 1pc2_A 2 EAVLNELVSVEDLLKFEKKFQSEKA-AGS--VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLA 78 (152)
T ss_dssp CCCCSCSCCHHHHHHHHHHHHHHHH-TTC--CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred hhHHhCcCCHHHHHHHHHHHHHHHc-cCC--CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHH
Confidence 4566666777777777777776632 122 334444455555544321 0 0224566677777
Q ss_pred HHHHHhCCccchhHHHHHHHHhhc
Q psy9584 70 ELYETQLLSNLSKPILRRAIELSQ 93 (466)
Q Consensus 70 ~~y~~~~~~~~ak~~l~k~i~~s~ 93 (466)
..|++.|+|..|+..++++++.--
T Consensus 79 v~~~kl~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 79 VGNYRLKEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCT
T ss_pred HHHHHccCHHHHHHHHHHHHhcCC
Confidence 777777777777777776666653
No 225
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=51.59 E-value=69 Score=27.37 Aligned_cols=28 Identities=25% Similarity=0.115 Sum_probs=16.9
Q ss_pred HHHHHHhcccccHHHHHHHHHhHHHHHH
Q psy9584 104 FQLAQIHAGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 104 fqLA~i~~~~~D~~~A~~~L~~g~~~A~ 131 (466)
+.||-.|..-|||..|.++++..++.--
T Consensus 78 Y~LAvg~yklg~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 78 FYLAVGNYRLKEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCC
Confidence 3445555666666666666666665543
No 226
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=50.86 E-value=26 Score=36.45 Aligned_cols=105 Identities=12% Similarity=-0.028 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhchhhhhHH-
Q psy9584 22 THLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHC- 100 (466)
Q Consensus 22 ~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~~~~~W~~- 100 (466)
+...+|.- +....+.+.|+.++.++ ..+.-||.|+.+.|.+..|....+++.. ...|..+..
T Consensus 124 a~~~IGd~-~~~~g~yeeA~~~Y~~a---------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~-~~~Wk~v~~a 186 (449)
T 1b89_A 124 HIQQVGDR-CYDEKMYDAAKLLYNNV---------------SNFGRLASTLVHLGEYQAAVDGARKANS-TRTWKEVCFA 186 (449)
T ss_dssp --------------CTTTHHHHHHHT---------------TCHHHHHHHHHTTTCHHHHHHHHHHHTC-HHHHHHHHHH
T ss_pred HHHHHHHH-HHHcCCHHHHHHHHHHh---------------hhHHHHHHHHHHhccHHHHHHHHHHcCC-chhHHHHHHH
Confidence 44444433 23345555666665543 3567889999999999888888888732 111211111
Q ss_pred ---------------------HHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHHHH
Q psy9584 101 ---------------------RLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRC 147 (466)
Q Consensus 101 ---------------------~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls~~ 147 (466)
.....+++.|...|.+..|++.|++|+..- ..++.++.-++.+
T Consensus 187 Cv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le----~ah~~~ftel~il 250 (449)
T 1b89_A 187 CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLE----RAHMGMFTELAIL 250 (449)
T ss_dssp HHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST----TCCHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCc----HHHHHHHHHHHHH
Confidence 112234567777789999999999888654 3345555544443
No 227
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=49.43 E-value=51 Score=28.20 Aligned_cols=87 Identities=8% Similarity=-0.053 Sum_probs=53.6
Q ss_pred HHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHH-------------HHHHHHHHHHhcccc--chHHHHHHHHHHHH
Q psy9584 6 LQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLAR-------------NHLEQAWHLSQSINA--FDDVKFEAASVLAE 70 (466)
Q Consensus 6 LeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~-------------~hLeka~~L~~~~~~--~~d~K~~a~slLa~ 70 (466)
.|+++....+|..=++++-++-+-+-. .....+++ .+..+|+.|++.+-. .++-+-+..+.||-
T Consensus 4 ~e~~l~~~~~~~~l~~~~~~y~~e~~~-~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAv 82 (126)
T 1nzn_A 4 MEAVLNELVSVEDLLKFEKKFQSEKAA-GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAV 82 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhccCCHHHHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 467777777777777778887766331 22222222 223445554443321 13367778888888
Q ss_pred HHHHhCCccchhHHHHHHHHhhc
Q psy9584 71 LYETQLLSNLSKPILRRAIELSQ 93 (466)
Q Consensus 71 ~y~~~~~~~~ak~~l~k~i~~s~ 93 (466)
-|++.|+|..|+..+...++.--
T Consensus 83 g~yklg~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 83 GNYRLKEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHhhhHHHHHHHHHHHHHhCC
Confidence 88888888888887777777653
No 228
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.25 E-value=1.6e+02 Score=31.16 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=52.2
Q ss_pred Hhhhhc---chhhHHHHHHHHHHHHHhCC-Cc-hH-HHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHH
Q psy9584 272 VERLSQ---ERELWTFANLNLAIVYLRGK-RE-GD-FAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRY 345 (466)
Q Consensus 272 Al~~~~---~~~~~~~~~lNlai~Yl~~~-~~-~e-~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~ 345 (466)
++|+++ |.++.+.+.+-+--.|+..+ ++ ++ +.+.. ..|+... +....+-|+|-.|-....+++|.+|.++
T Consensus 217 ~~rta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~--~fP~~~~--sn~q~~rY~YY~GRI~a~q~~Y~eA~~~ 292 (523)
T 4b4t_S 217 FLKIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKL--EYPHTDV--SSSLEARYFFYLSKINAIQLDYSTANEY 292 (523)
T ss_dssp HHHHCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHH--CSCTTTS--CHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcC--cCCcccC--CHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 555532 45666765555556677755 43 33 44433 2443322 3334467778889999999999999999
Q ss_pred HHHHHHhhhh
Q psy9584 346 LRETLKMANA 355 (466)
Q Consensus 346 lre~lk~a~~ 355 (466)
|..+++-+..
T Consensus 293 L~~A~rkap~ 302 (523)
T 4b4t_S 293 IIAAIRKAPH 302 (523)
T ss_dssp HHHHTSSCSC
T ss_pred HHHHHHhCCc
Confidence 9999987643
No 229
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=43.56 E-value=2.9e+02 Score=28.37 Aligned_cols=84 Identities=12% Similarity=-0.004 Sum_probs=57.8
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHH
Q psy9584 334 FFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLY 413 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly 413 (466)
-..|++.+|.+.+++-.+..- .-...++..|=..|.+.|+.++|.+.... |.-..=.||. .+...|=+.|
T Consensus 116 ~~~g~~~~A~~l~~~M~~~g~-----~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~-M~~~G~~Pd~----~ty~~Li~~~ 185 (501)
T 4g26_A 116 VAKDDPEMAFDMVKQMKAFGI-----QPRLRSYGPALFGFCRKGDADKAYEVDAH-MVESEVVPEE----PELAALLKVS 185 (501)
T ss_dssp HHHTCHHHHHHHHHHHHHTTC-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHH-HHHTTCCCCH----HHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHcCC-----CCccceehHHHHHHHHCCCHHHHHHHHHH-HHhcCCCCCH----HHHHHHHHHH
Confidence 457889999999887654211 11233566666778888999999887764 3344556773 4566666888
Q ss_pred HHcCCchHHHHHHH
Q psy9584 414 KILNDPVRENEALQ 427 (466)
Q Consensus 414 ~~~g~~~~~~e~~~ 427 (466)
.+.|+.++|.+.++
T Consensus 186 ~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 186 MDTKNADKVYKTLQ 199 (501)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred hhCCCHHHHHHHHH
Confidence 89999988877554
No 230
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=43.02 E-value=24 Score=27.92 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=27.8
Q ss_pred ccchhhHHHHHH-HhHHHhhhhcHHHHHHHHHHHHH
Q psy9584 317 HSHSLRAAAYYV-QGLQSFFQARYNEAKRYLRETLK 351 (466)
Q Consensus 317 ~~~~L~a~~~yv-~~~~~~~~~~~~eAk~~lre~lk 351 (466)
+...+..++.+| .|+..=..|+|.+|..+|.++++
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 445556666666 88888889999999999999887
No 231
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=39.90 E-value=2.8e+02 Score=27.15 Aligned_cols=144 Identities=13% Similarity=-0.008 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHhCC-ccchhHHHHHHHHhhc-hhhhhHHHHHHHHHHHhc----------ccccHHHHHHHHHhHHHH
Q psy9584 62 FEAASVLAELYETQLL-SNLSKPILRRAIELSQ-HSIYWHCRLIFQLAQIHA----------GEKDYELASSLLGVGVDY 129 (466)
Q Consensus 62 ~~a~slLa~~y~~~~~-~~~ak~~l~k~i~~s~-~~~~W~~~~~fqLA~i~~----------~~~D~~~A~~~L~~g~~~ 129 (466)
|+|-+.-+.+....|. +..+.....+.|+.-- ++..|+++.... ..+.. .++.+..+++....++..
T Consensus 144 y~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll-~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~ 222 (331)
T 3dss_A 144 FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLL-PQLHPQPDSGPQGRLPENVLLKELELVQNAFFT 222 (331)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH-HHHSCCC------CCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHhhhccccccccccchHHHHHHHHHHHHHHHh
Confidence 4566666666677775 3567777777777653 777899887663 33321 125688899999998888
Q ss_pred HHHhcChHHHHHHHHHHHHHHhcccC-----ccHHHHHHHHHhhHhhhhccccchHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy9584 130 ANISNAQYTRVLFLLSRCMLLLIDKK-----VNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSV 204 (466)
Q Consensus 130 A~~~~d~~~~~lf~ls~~~~ll~~~~-----~~~v~~al~~~~~l~~~~~g~~~~~e~L~~~~~~L~i~~~l~~g~v~~~ 204 (466)
.-...+.-...-+.+..+. ...+ .+.+++.+..+.++++-. |..+..+.......+... ..|..+.+
T Consensus 223 ~P~d~SaW~Y~r~ll~~~~---~~~~~~~~~~~~l~~el~~~~elle~~---pd~~w~l~~~~~~~~~~~--~~~~~~~~ 294 (331)
T 3dss_A 223 DPNDQSAWFYHRWLLGAGS---GRCELSVEKSTVLQSELESCKELQELE---PENKWCLLTIILLMRALD--PLLYEKET 294 (331)
T ss_dssp STTCHHHHHHHHHHHHSSS---CGGGCCHHHHHHHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHC--TTTTHHHH
T ss_pred CCCCHHHHHHHHHHHHhcc---CccccchHHHHHHHHHHHHHHHHHhhC---cccchHHHHHHHHHHhhc--ccccHHHH
Confidence 7744444333333332221 1111 134456677777777653 334566665555433332 13445556
Q ss_pred hHHHHHHHHH
Q psy9584 205 KPCLKQLQQS 214 (466)
Q Consensus 205 k~~lkqLq~~ 214 (466)
+..+.+|..+
T Consensus 295 ~~~l~~l~~~ 304 (331)
T 3dss_A 295 LQYFSTLKAV 304 (331)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666666543
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=38.91 E-value=84 Score=27.56 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=22.3
Q ss_pred HHHHHHHHhcccccHHHHHHHHHhHHHH
Q psy9584 102 LIFQLAQIHAGEKDYELASSLLGVGVDY 129 (466)
Q Consensus 102 ~~fqLA~i~~~~~D~~~A~~~L~~g~~~ 129 (466)
.++.||-.|..-|||..|.++++..++.
T Consensus 79 cLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 79 CLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3455788889999999999888876654
No 233
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=38.72 E-value=91 Score=27.89 Aligned_cols=102 Identities=20% Similarity=0.182 Sum_probs=66.5
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCc-cchhHHHHHHHHhhc
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLS-NLSKPILRRAIELSQ 93 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~~-~~ak~~l~k~i~~s~ 93 (466)
.|..|+..-.+-+ +-..|+....+-|++ .+ ...+-....+.||.-|-+..+. ..+|..+..-|.+-.
T Consensus 6 ~P~q~a~i~a~~a----fl~~dYs~VI~~L~~-------~~-~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkS 73 (161)
T 2ynq_A 6 QPKQEAYIQSTEL----FLQNKYSDVITTLED-------YA-PEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKT 73 (161)
T ss_dssp CHHHHHHHHHHHH----HTTTCHHHHHHHHTT-------SC-GGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTS
T ss_pred cchHHHHHHHHHH----HHHhhHHHHHHHHhc-------CC-hhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccC
Confidence 3555554444333 224555555555554 34 6677788999999999998875 457776665555443
Q ss_pred ---hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhcChHHHHHHHHH
Q psy9584 94 ---HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLS 145 (466)
Q Consensus 94 ---~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~A~~~~d~~~~~lf~ls 145 (466)
...+|.+ ..+||+..| +++|+..+|+.+-+++.+=
T Consensus 74 de~yL~YWIy----------iGRg~~~eA-------lDiA~~L~D~qLilyAl~K 111 (161)
T 2ynq_A 74 DEQYMLYWIY----------IGRSQSEEA-------LELARTIEDRDLIVYALLK 111 (161)
T ss_dssp CHHHHHHHHH----------HHHTCHHHH-------HHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHH----------HcCCchHHH-------HHHHHhcCcHHHHHHHHHH
Confidence 3556744 556777755 7899999999887776443
No 234
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=37.37 E-value=1.6e+02 Score=32.46 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc-hhhhhHHHHHHHHHHHhcccccHHHHHHHHHhH
Q psy9584 61 KFEAASVLAELYETQLLSNLSKPILRRAIELSQ-HSIYWHCRLIFQLAQIHAGEKDYELASSLLGVG 126 (466)
Q Consensus 61 K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~-~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L~~g 126 (466)
.....+..|+.....|.+..|..+-++++..+- .+..|. .||.+|...|||+.|+=.|...
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~-----~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWY-----NLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHH-----HHHHHHHHTTCHHHHHHHHHHS
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHH-----HHHHHHHHhccHHHHHHHHhcC
Confidence 344566667877788899999999999999986 566674 5999999999999999888765
No 235
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.28 E-value=1.3e+02 Score=30.14 Aligned_cols=95 Identities=9% Similarity=0.014 Sum_probs=66.2
Q ss_pred hhcHHHHHHHHHHHHHhhhhh-----------hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChh--HH
Q psy9584 336 QARYNEAKRYLRETLKMANAE-----------DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVH--VQ 402 (466)
Q Consensus 336 ~~~~~eAk~~lre~lk~a~~~-----------~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~--~q 402 (466)
...+++|.+++.+...--... +...-.....+.++.+|+..|+..+|++.+..+-.+-.+.+|+. +.
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~ 168 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRIT 168 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHH
Confidence 346788888887653322211 11122334456789999999999999999999999988888765 33
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHH
Q psy9584 403 LWASAILKDLYKILNDPVRENEALQMHC 430 (466)
Q Consensus 403 lw~~~lL~~ly~~~g~~~~~~e~~~~~~ 430 (466)
.--+....+.|+..|++..+....-.+.
T Consensus 169 ~~~y~~~~~~~~~~~~~a~~y~~~l~~l 196 (393)
T 4b4t_O 169 NSFYSTNSQYFKFKNDFNSFYYTSLLYL 196 (393)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3344666788889999888776555544
No 236
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=37.11 E-value=2.6e+02 Score=27.37 Aligned_cols=88 Identities=11% Similarity=-0.030 Sum_probs=51.6
Q ss_pred cCCHHHHHHHHHHHHH-HHhccccchHHHHHHHHHHHHHHHHhCCcc--------------------chhHHHHHHHHhh
Q psy9584 34 TKNIDLARNHLEQAWH-LSQSINAFDDVKFEAASVLAELYETQLLSN--------------------LSKPILRRAIELS 92 (466)
Q Consensus 34 T~N~~~A~~hLeka~~-L~~~~~~~~d~K~~a~slLa~~y~~~~~~~--------------------~ak~~l~k~i~~s 92 (466)
.+|.++|...|..|-. +.+.+ -...=.+...++-++|.+.+... .-+..++++|.-|
T Consensus 46 ~~~~~eAidlL~~ga~~ll~~~--Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS 123 (312)
T 2wpv_A 46 SKSYEHAIELISQGALSFLKAK--QGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWS 123 (312)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHCC--CcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHH
Confidence 3789999999888766 44442 33344455556667777766321 1123444444444
Q ss_pred c---hhhhhHHHHHHHHHHHhcccccHHHHHHHH
Q psy9584 93 Q---HSIYWHCRLIFQLAQIHAGEKDYELASSLL 123 (466)
Q Consensus 93 ~---~~~~W~~~~~fqLA~i~~~~~D~~~A~~~L 123 (466)
. +.+..+..+...+|+.++.++++..|..++
T Consensus 124 ~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~ 157 (312)
T 2wpv_A 124 IKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYF 157 (312)
T ss_dssp HHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHH
Confidence 3 224556666777777777777776664444
No 237
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=35.89 E-value=1.9e+02 Score=31.89 Aligned_cols=84 Identities=19% Similarity=0.169 Sum_probs=56.6
Q ss_pred hhhcHHHHHHHHHHHHHhh----h-----hhhhhhHHHhH---HHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHH
Q psy9584 335 FQARYNEAKRYLRETLKMA----N-----AEDLNRLTSCS---LVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQ 402 (466)
Q Consensus 335 ~~~~~~eAk~~lre~lk~a----~-----~~~l~~l~~~~---l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~q 402 (466)
..++--+|-+.++++++-- + ..+..+++.+. |.+=....++-|+++-|.+.|+.|+..| |+.
T Consensus 297 ~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a---Pse--- 370 (754)
T 4gns_B 297 IETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELA---LDS--- 370 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---SSC---
T ss_pred hhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcC---chh---
Confidence 3456668888888888621 1 11122333332 3333556667899999999999998876 553
Q ss_pred HHHHHHHHHHHHHcCCchHHHH
Q psy9584 403 LWASAILKDLYKILNDPVRENE 424 (466)
Q Consensus 403 lw~~~lL~~ly~~~g~~~~~~e 424 (466)
.-+=..|+++|-.+||+++|+=
T Consensus 371 F~tW~~La~vYi~l~d~e~ALL 392 (754)
T 4gns_B 371 FESWYNLARCHIKKEEYEKALF 392 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHH
Confidence 3444689999999999999964
No 238
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=35.85 E-value=1.4e+02 Score=34.26 Aligned_cols=101 Identities=15% Similarity=0.085 Sum_probs=70.6
Q ss_pred HHHHHhHHHhhhhcHHHHHHHHHHHHH-----------------hhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhH
Q psy9584 325 AYYVQGLQSFFQARYNEAKRYLRETLK-----------------MANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVT 387 (466)
Q Consensus 325 ~~yv~~~~~~~~~~~~eAk~~lre~lk-----------------~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~ 387 (466)
..|+.|...+..|++++|.++++++-. +......+...+..|.-...+|-..+-++.+.+.++
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 348888888999999999999986521 111111233344567888889999999999999999
Q ss_pred HHHHHhhcCCCh-hHHHHHHHHHHHHHHHcCCchHHHHHHH
Q psy9584 388 PAMQLASKIPDV-HVQLWASAILKDLYKILNDPVRENEALQ 427 (466)
Q Consensus 388 ~a~~lAkK~~D~-~~qlw~~~lL~~ly~~~g~~~~~~e~~~ 427 (466)
-|++.+..-++. ...+|+. ++ +.+-..|+++.|+.+..
T Consensus 924 lAi~~~~~~~~~~~~~l~~~-iF-k~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 924 LADASKETDDEDLSIAITHE-TL-KTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHHCCSCCHHHHHHHHHH-HH-HHHHHHCCSGGGGHHHH
T ss_pred HHHHhccCCChhhHHHHHHH-HH-HHHHhhCCHHHHHHHHH
Confidence 999987654332 3335653 33 33446799999988763
No 239
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=34.82 E-value=1e+02 Score=26.65 Aligned_cols=30 Identities=10% Similarity=0.074 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhcccccHHHHHHHHHhHHHH
Q psy9584 100 CRLIFQLAQIHAGEKDYELASSLLGVGVDY 129 (466)
Q Consensus 100 ~~~~fqLA~i~~~~~D~~~A~~~L~~g~~~ 129 (466)
-..++.||-.|..-|||..|.++.+..++.
T Consensus 78 Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 78 RECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 344455788889999999998888776553
No 240
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=32.90 E-value=1.5e+02 Score=30.75 Aligned_cols=73 Identities=12% Similarity=0.201 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHhhhCCCc----cccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHh-hhhh
Q psy9584 284 FANLNLAIVYLRGKREGDFAALLERINPET----LTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKM-ANAE 356 (466)
Q Consensus 284 ~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~----~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~-a~~~ 356 (466)
++..+|=-+|.+.++..-+.+++..+++.. +.....+-+.-+.|--|-..+.+++|.+|-++|.+|++. +..+
T Consensus 177 ~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 177 YLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 566677789999776665666665555332 223455567888888999999999999999999999998 7754
No 241
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=30.67 E-value=2.3e+02 Score=29.68 Aligned_cols=16 Identities=6% Similarity=0.081 Sum_probs=11.4
Q ss_pred hhhhcHHHHHHHHHHH
Q psy9584 334 FFQARYNEAKRYLRET 349 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~ 349 (466)
..+++++.|.+.|+.+
T Consensus 692 l~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 692 LQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHc
Confidence 5677777777777754
No 242
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=30.46 E-value=4.1e+02 Score=27.18 Aligned_cols=82 Identities=6% Similarity=-0.036 Sum_probs=56.4
Q ss_pred hhcHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q psy9584 336 QARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKI 415 (466)
Q Consensus 336 ~~~~~eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lAkK~~D~~~qlw~~~lL~~ly~~ 415 (466)
.+...+|.+.+.+-.+.. ..-...+++.|=..|.+.|+.++|.++...-. -..-.||. .+...+=.-|.+
T Consensus 83 ~~~l~~A~~lf~~M~~~G-----~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~-~~g~~Pd~----~tyn~lI~~~~~ 152 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDK-----VVPNEATFTNGARLAVAKDDPEMAFDMVKQMK-AFGIQPRL----RSYGPALFGFCR 152 (501)
T ss_dssp CHHHHHHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH-HTTCCCCH----HHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HcCCCCcc----ceehHHHHHHHH
Confidence 455788998888765421 12234467778888999999999999887532 23345774 344444477889
Q ss_pred cCCchHHHHHHH
Q psy9584 416 LNDPVRENEALQ 427 (466)
Q Consensus 416 ~g~~~~~~e~~~ 427 (466)
.|+.+.|.+.+.
T Consensus 153 ~g~~~~A~~l~~ 164 (501)
T 4g26_A 153 KGDADKAYEVDA 164 (501)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 999999977543
No 243
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=30.25 E-value=1.1e+02 Score=26.44 Aligned_cols=74 Identities=9% Similarity=0.034 Sum_probs=51.8
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc
Q psy9584 15 PPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSIN-AFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ 93 (466)
Q Consensus 15 ~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~-~~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~ 93 (466)
.|.+-+.|.+++|+-|.. +.|.++ ..+|+.|++.+- .-.+.+-+-.+.||--+++.|.|..|+......++.--
T Consensus 35 ~~~vs~qt~F~yAw~Lv~-S~~~~d----~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP 109 (134)
T 3o48_A 35 GPTATIQSRFNYAWGLIK-STDVND----ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER 109 (134)
T ss_dssp GGGSCHHHHHHHHHHHHH-SSCHHH----HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCT
T ss_pred CCCCChhhHHHHHHHHHc-CCCHHH----HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCC
Confidence 455566889999987664 455433 334555433321 12456888899999999999999999998888777663
No 244
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=30.22 E-value=2.9e+02 Score=25.87 Aligned_cols=60 Identities=10% Similarity=0.081 Sum_probs=40.0
Q ss_pred hhhhcHHHHHHHHHHHHHhhhhh---hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHHHh
Q psy9584 334 FFQARYNEAKRYLRETLKMANAE---DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLA 393 (466)
Q Consensus 334 ~~~~~~~eAk~~lre~lk~a~~~---~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~lA 393 (466)
|..|..+.|+..|+++..+|+++ -.+.-.+.+|.+-=-.|--+++.++|-++++.|.+.+
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 34555789999999999999875 1122234444443333446778888888888887653
No 245
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=29.45 E-value=82 Score=26.44 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=25.0
Q ss_pred chhhHHHHHH-HhHHHhhhhcHHHHHHHHHHHHH
Q psy9584 319 HSLRAAAYYV-QGLQSFFQARYNEAKRYLRETLK 351 (466)
Q Consensus 319 ~~L~a~~~yv-~~~~~~~~~~~~eAk~~lre~lk 351 (466)
..+.-++.+| +|+..=..++|.+|..+|.+++.
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4565555555 78877788888899988888887
No 246
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=29.00 E-value=1.5e+02 Score=26.69 Aligned_cols=100 Identities=9% Similarity=0.039 Sum_probs=0.0
Q ss_pred HhhhhcchhhHHHHHHHHHHHHHhCCCchHHHHHHhhhCCCccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHH
Q psy9584 272 VERLSQERELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLK 351 (466)
Q Consensus 272 Al~~~~~~~~~~~~~lNlai~Yl~~~~~~e~~~~l~~i~~~~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk 351 (466)
||+.++|++...-+.+.+| +=...+++++.++. ....+.|=-.+ ..+++++-|.+.|+.+-.
T Consensus 1 AL~~~~D~~~rF~LAL~lg-------~l~~A~e~a~~l~~---~~~Wk~Lg~~A--------L~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 1 ALQFVQDPHIRFDLALEYG-------NLDAALDEAKKLND---SITWERLIQEA--------LAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp CCTTSSCHHHHHHHHHHTT-------CHHHHHHHHHHHCC---HHHHHHHHHHH--------HHTTCHHHHHHHHHHTTC
T ss_pred CccccCChHHHHHHHHhcC-------CHHHHHHHHHHhCC---HHHHHHHHHHH--------HHcCChHHHHHHHHHhCC
Q ss_pred hhhh----------hhhhhHHHhH-----HHHHHHHHHhcCChHHHHHhhHHH
Q psy9584 352 MANA----------EDLNRLTSCS-----LVLLGHIFLSLGNHRESMNMVTPA 389 (466)
Q Consensus 352 ~a~~----------~~l~~l~~~~-----l~llg~i~l~~~~~~ea~~~~~~a 389 (466)
.+.- +.+.++...+ +.+-.++++-+|+.+++.++...+
T Consensus 63 ~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 63 FDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHC
No 247
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=25.27 E-value=5e+02 Score=25.62 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhC
Q psy9584 22 THLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQL 76 (466)
Q Consensus 22 ~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~ 76 (466)
..-||..|+-....+...=++.+.+|+.-|.+...+.-+--+.+.++|.+|.+.+
T Consensus 96 ~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~ 150 (336)
T 3lpz_A 96 SRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEG 150 (336)
T ss_dssp HHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccC
Confidence 4445556555555444344556666666555433344444455556666665554
No 248
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=23.69 E-value=1.1e+02 Score=26.87 Aligned_cols=72 Identities=8% Similarity=0.005 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHhCCccchhHHHHHHHHhhc
Q psy9584 17 RVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINA-FDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQ 93 (466)
Q Consensus 17 ~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~-~~d~K~~a~slLa~~y~~~~~~~~ak~~l~k~i~~s~ 93 (466)
.+-..+.++||+.|.. +.|.+. ..+|+.|++.+-+ -.+-+-+-.+.||--|++.|+|..|+......++.--
T Consensus 36 ~vs~~t~F~YAw~Lv~-S~~~~d----i~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP 108 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIK-STDVND----ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER 108 (144)
T ss_dssp TSCHHHHHHHHHHHHH-SSSHHH----HHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCC
T ss_pred CCcHHHHHHHHHHHHc-CCCHHH----HHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 4556788999988765 444332 3455554443311 1235778889999999999999999998888877764
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=22.90 E-value=79 Score=33.39 Aligned_cols=39 Identities=18% Similarity=0.075 Sum_probs=22.8
Q ss_pred HHHHHhhhhhhhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHH
Q psy9584 347 RETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPA 389 (466)
Q Consensus 347 re~lk~a~~~~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a 389 (466)
.+++++++..+..++-. -+|..++..|+.+.|++....+
T Consensus 669 ~~A~~~~~~~~~~~~W~----~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 669 TLARDLLTDESAEMKWR----ALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHTTCCCHHHHH----HHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcHhHHH----HHHHHHHHcCCHHHHHHHHHHc
Confidence 34444555544444333 6777777777777777655543
No 250
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=22.57 E-value=1e+02 Score=24.12 Aligned_cols=32 Identities=13% Similarity=0.220 Sum_probs=24.3
Q ss_pred hhhHHHHHH-HhHHHhhhhcHHHHHHHHHHHHH
Q psy9584 320 SLRAAAYYV-QGLQSFFQARYNEAKRYLRETLK 351 (466)
Q Consensus 320 ~L~a~~~yv-~~~~~~~~~~~~eAk~~lre~lk 351 (466)
.+.-++.+| .|+..=..|+|.+|..+|.++++
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344455555 77777888999999999998887
No 251
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=22.32 E-value=2.2e+02 Score=26.80 Aligned_cols=60 Identities=15% Similarity=0.079 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHhhhhh-hhhhHHHhHHHHHHHHHH--hcCChHHHHHhhHHHHHHhhcCCC
Q psy9584 339 YNEAKRYLRETLKMANAE-DLNRLTSCSLVLLGHIFL--SLGNHRESMNMVTPAMQLASKIPD 398 (466)
Q Consensus 339 ~~eAk~~lre~lk~a~~~-~l~~l~~~~l~llg~i~l--~~~~~~ea~~~~~~a~~lAkK~~D 398 (466)
.++|++.|++|.++|+.+ .-..-+-.+|.+.--+|+ -.++.++|-++++.|.+-|-.--|
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld 208 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELD 208 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhh
Confidence 357899999999999764 111222233334434444 578999999999999887765444
No 252
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=22.04 E-value=2.9e+02 Score=24.51 Aligned_cols=105 Identities=15% Similarity=0.250 Sum_probs=64.1
Q ss_pred chhhHHHHHHHHHHHHHhCCCc-hHHHHHHhhhCCC-ccccccchhhHHHHHHHhHHHhhhhcHHHHHHHHH------HH
Q psy9584 278 ERELWTFANLNLAIVYLRGKRE-GDFAALLERINPE-TLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLR------ET 349 (466)
Q Consensus 278 ~~~~~~~~~lNlai~Yl~~~~~-~e~~~~l~~i~~~-~~~~~~~~L~a~~~yv~~~~~~~~~~~~eAk~~lr------e~ 349 (466)
+...|..||+-=+ -+ .-..+.++.|+.- .+ +...+||.-+ +-.+.......-.+.|+.++- +-
T Consensus 40 ~E~NW~ICNiiD~-------a~C~y~v~vLd~IGkiFDi-s~C~NlKrVi-~C~~~~n~~se~vd~ALd~lv~~~KkDqL 110 (172)
T 1wy6_A 40 SEYNWFICNLLES-------IDCRYMFQVLDKIGSYFDL-DKCQNLKSVV-ECGVINNTLNEHVNKALDILVIQGKRDKL 110 (172)
T ss_dssp HHHTHHHHHHHHH-------CCHHHHHHHHHHHGGGSCG-GGCSCTHHHH-HHHHHTTCCCHHHHHHHHHHHHTTCHHHH
T ss_pred cccceeeeecchh-------hchhHHHHHHHHHhhhcCc-HhhhcHHHHH-HHHHHhcchHHHHHHHHHHHHHhccHhHH
Confidence 4577888887622 01 1255667777653 33 4566676644 322222222333455666554 23
Q ss_pred HHhhhhh-hhhhHHHhHHHHHHHHHHhcCChHHHHHhhHHHHH
Q psy9584 350 LKMANAE-DLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQ 391 (466)
Q Consensus 350 lk~a~~~-~l~~l~~~~l~llg~i~l~~~~~~ea~~~~~~a~~ 391 (466)
-++.++. .++...+..|+=++..|-..|+.++|.+.++.|+.
T Consensus 111 dki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 111 EEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3444442 45666677889999999999999999999998875
No 253
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=22.00 E-value=7.5e+02 Score=26.49 Aligned_cols=105 Identities=14% Similarity=0.074 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh--------ccccc----hHHH---HHHHHHHHHHHHHhCCccchhHHH
Q psy9584 21 RTHLQLGNILLTHTKNIDLARNHLEQAWHLSQ--------SINAF----DDVK---FEAASVLAELYETQLLSNLSKPIL 85 (466)
Q Consensus 21 ~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~--------~~~~~----~d~K---~~a~slLa~~y~~~~~~~~ak~~l 85 (466)
..+++++.+. +...|++.|+..+++++.... ..|.. ..++ .......+++..+.|....++.++
T Consensus 379 ~Lwl~~a~~e-e~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf 457 (679)
T 4e6h_A 379 VLAFSLSEQY-ELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIF 457 (679)
T ss_dssp HHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4567777764 345679999999999987421 11111 0111 124556677777778888999999
Q ss_pred HHHHHh-hc-hhhhhHHHHHHHHHHHh-cccccHHHHHHHHHhHHHHHH
Q psy9584 86 RRAIEL-SQ-HSIYWHCRLIFQLAQIH-AGEKDYELASSLLGVGVDYAN 131 (466)
Q Consensus 86 ~k~i~~-s~-~~~~W~~~~~fqLA~i~-~~~~D~~~A~~~L~~g~~~A~ 131 (466)
.++++. .. .+..|. ..|.+- ...+|+..|..+++.|++..-
T Consensus 458 ~~A~~~~~~~~~~lyi-----~~A~lE~~~~~d~e~Ar~ife~~Lk~~p 501 (679)
T 4e6h_A 458 GKCRRLKKLVTPDIYL-----ENAYIEYHISKDTKTACKVLELGLKYFA 501 (679)
T ss_dssp HHHHHTGGGSCTHHHH-----HHHHHHHTTTSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCChHHHH-----HHHHHHHHhCCCHHHHHHHHHHHHHHCC
Confidence 999987 32 233333 223332 235779999999999999754
No 254
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=21.92 E-value=4.7e+02 Score=24.98 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=0.0
Q ss_pred hHHHHHHHhHHHhhhhcHH-HHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHhcC--ChHHHHHhhHHHHHHhhcCCC
Q psy9584 322 RAAAYYVQGLQSFFQARYN-EAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLG--NHRESMNMVTPAMQLASKIPD 398 (466)
Q Consensus 322 ~a~~~yv~~~~~~~~~~~~-eAk~~lre~lk~a~~~~l~~l~~~~l~llg~i~l~~~--~~~ea~~~~~~a~~lAkK~~D 398 (466)
+.+..|+.++ ...+.++ +|+....++|.+-.+.-- +...-|.+...+| +++++.+....++..--|.+.
T Consensus 33 ~~~~~~~~a~--~~~~e~s~~aL~~t~~~L~~nP~~~t------aWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~ 104 (306)
T 3dra_A 33 KQIMGLLLAL--MKAEEYSERALHITELGINELASHYT------IWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQ 104 (306)
T ss_dssp HHHHHHHHHH--HHTTCCSHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCH
T ss_pred HHHHHHHHHH--HHcCCCCHHHHHHHHHHHHHCcHHHH------HHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHH
Q ss_pred hhHHHHHH--HHHHHHHHHc---CCchHHHHHHH
Q psy9584 399 VHVQLWAS--AILKDLYKIL---NDPVRENEALQ 427 (466)
Q Consensus 399 ~~~qlw~~--~lL~~ly~~~---g~~~~~~e~~~ 427 (466)
.|.+ .+|..+.... +++++|.+...
T Consensus 105 ----aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~ 134 (306)
T 3dra_A 105 ----IWNYRQLIIGQIMELNNNDFDPYREFDILE 134 (306)
T ss_dssp ----HHHHHHHHHHHHHHHTTTCCCTHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHhccccCCHHHHHHHHH
No 255
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=21.83 E-value=3.4e+02 Score=29.28 Aligned_cols=92 Identities=10% Similarity=0.124 Sum_probs=58.9
Q ss_pred hhHHHhhcCCCChhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCC---ccc
Q psy9584 4 QCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLL---SNL 80 (466)
Q Consensus 4 ~CLeAvl~~~~~p~~Ea~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~~---~~~ 80 (466)
+.||..+..+|- -..+.++|...+.. ..+.+.|+..+|+++... |... ++...+ ++.-...|. +..
T Consensus 53 ~~lE~~l~~np~---d~~~W~~yi~~~~~-~~~~~~aR~vyEraL~~f---P~~~--~lW~~Y--i~~E~~~~~~~~~~~ 121 (679)
T 4e6h_A 53 GKLNDMIEEQPT---DIFLYVKLLKHHVS-LKQWKQVYETFDKLHDRF---PLMA--NIWCMR--LSLEFDKMEELDAAV 121 (679)
T ss_dssp HHHHHHHHHCTT---CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC---TTCH--HHHHHH--HHHHHTC--CCCHHH
T ss_pred HHHHHHHHHCcC---CHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHC---CCCH--HHHHHH--HHHHHhhCCcchHHH
Confidence 345444443332 24577888877433 468999999999987752 3222 233333 233344556 888
Q ss_pred hhHHHHHHHHhh---chhhhhHHHHHHHH
Q psy9584 81 SKPILRRAIELS---QHSIYWHCRLIFQL 106 (466)
Q Consensus 81 ak~~l~k~i~~s---~~~~~W~~~~~fqL 106 (466)
+..++.+++... .+...|..-+.|..
T Consensus 122 v~~lfeRal~~~~~~~sv~LW~~Yl~f~~ 150 (679)
T 4e6h_A 122 IEPVLARCLSKELGNNDLSLWLSYITYVR 150 (679)
T ss_dssp HHHHHHHHTCSSSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 999999999988 67779998887744
No 256
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=20.96 E-value=1.2e+02 Score=27.65 Aligned_cols=38 Identities=18% Similarity=0.411 Sum_probs=32.1
Q ss_pred hhhHHHHHHHhHHHhhhhcHHHHHHHHHHHHHhhhhhh
Q psy9584 320 SLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAED 357 (466)
Q Consensus 320 ~L~a~~~yv~~~~~~~~~~~~eAk~~lre~lk~a~~~~ 357 (466)
+-+.-+.|-.|-..+.+++|.+|-++|.++++......
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 33567778889999999999999999999999877553
No 257
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=20.93 E-value=1.2e+02 Score=23.48 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=24.8
Q ss_pred cchhhHHHHHH-HhHHHhhhhcHHHHHHHHHHHHH
Q psy9584 318 SHSLRAAAYYV-QGLQSFFQARYNEAKRYLRETLK 351 (466)
Q Consensus 318 ~~~L~a~~~yv-~~~~~~~~~~~~eAk~~lre~lk 351 (466)
+.++.-++.+| +|+..=..++|.+|..+|.+++.
T Consensus 7 ~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 7 GDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33454455455 78777788899999999988887
No 258
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=20.07 E-value=4.5e+02 Score=26.66 Aligned_cols=103 Identities=12% Similarity=-0.012 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhC-CccchhHHHHHHHHhhchhh-h
Q psy9584 20 ARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQL-LSNLSKPILRRAIELSQHSI-Y 97 (466)
Q Consensus 20 a~~rLrla~lL~~~T~N~~~A~~hLeka~~L~~~~~~~~d~K~~a~slLa~~y~~~~-~~~~ak~~l~k~i~~s~~~~-~ 97 (466)
..+...+++.+. ...+.+.|+..+++| .+. ..+ .+...--|.+-...+ ....++.++..+++...+.+ .
T Consensus 286 ~~lw~~y~~~~~-r~~~~~~AR~i~~~A--~~~---~~~---~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~ 356 (493)
T 2uy1_A 286 DLLRINHLNYVL-KKRGLELFRKLFIEL--GNE---GVG---PHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLL 356 (493)
T ss_dssp HHHHHHHHHHHH-HHHCHHHHHHHHHHH--TTS---CCC---HHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHh--hCC---CCC---hHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHH
Confidence 477788887654 356799999999999 222 121 222222344444434 57889999999998765433 3
Q ss_pred hHHHHHHHHHHHhcccccHHHHHHHHHh----------HHHHHHHhcCh
Q psy9584 98 WHCRLIFQLAQIHAGEKDYELASSLLGV----------GVDYANISNAQ 136 (466)
Q Consensus 98 W~~~~~fqLA~i~~~~~D~~~A~~~L~~----------g~~~A~~~~d~ 136 (466)
|..- ++.....||.+.|-.+++. -+++=..+||.
T Consensus 357 ~~~y-----id~e~~~~~~~~aR~l~er~~k~~~lw~~~~~fE~~~G~~ 400 (493)
T 2uy1_A 357 KEEF-----FLFLLRIGDEENARALFKRLEKTSRMWDSMIEYEFMVGSM 400 (493)
T ss_dssp HHHH-----HHHHHHHTCHHHHHHHHHHSCCBHHHHHHHHHHHHHHSCH
T ss_pred HHHH-----HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 3332 2333445777777655444 34445557775
Done!