Query psy9587
Match_columns 236
No_of_seqs 168 out of 1339
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 23:29:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y8q_A Ubiquitin-like 1 activa 100.0 1.6E-33 5.3E-38 258.0 13.5 138 98-236 16-155 (346)
2 1zud_1 Adenylyltransferase THI 100.0 4.9E-32 1.7E-36 237.7 12.5 138 98-236 6-148 (251)
3 3h8v_A Ubiquitin-like modifier 100.0 3.2E-31 1.1E-35 238.1 14.5 136 99-236 14-167 (292)
4 1tt5_A APPBP1, amyloid protein 100.0 3.7E-32 1.3E-36 261.5 7.4 137 99-236 13-154 (531)
5 1jw9_B Molybdopterin biosynthe 100.0 5.7E-31 1.9E-35 230.5 12.3 138 98-236 9-151 (249)
6 3h5n_A MCCB protein; ubiquitin 100.0 4.2E-30 1.4E-34 235.8 14.8 140 96-236 90-239 (353)
7 1y8q_B Anthracycline-, ubiquit 100.0 9.8E-30 3.3E-34 248.5 13.4 132 104-236 3-138 (640)
8 3cmm_A Ubiquitin-activating en 100.0 5.6E-30 1.9E-34 261.2 12.0 138 98-236 405-556 (1015)
9 1tt5_B Ubiquitin-activating en 100.0 2.9E-29 1E-33 236.1 13.6 121 115-236 39-171 (434)
10 3cmm_A Ubiquitin-activating en 100.0 1.5E-29 5.2E-34 258.0 11.1 136 97-236 6-144 (1015)
11 3rui_A Ubiquitin-like modifier 100.0 5.7E-29 2E-33 227.5 12.0 129 106-235 22-168 (340)
12 3vh1_A Ubiquitin-like modifier 100.0 2.1E-28 7.2E-33 237.2 11.5 136 99-235 301-461 (598)
13 4gsl_A Ubiquitin-like modifier 99.9 7.2E-28 2.5E-32 233.8 11.7 129 106-235 314-460 (615)
14 2nvu_B Maltose binding protein 99.9 2.3E-27 8E-32 236.7 13.4 120 115-235 410-541 (805)
15 3ic5_A Putative saccharopine d 98.1 4.4E-05 1.5E-09 56.5 10.5 90 117-235 6-97 (118)
16 3dfz_A SIRC, precorrin-2 dehyd 98.0 1.2E-05 4.1E-10 69.2 7.1 93 112-235 27-119 (223)
17 3jyo_A Quinate/shikimate dehyd 97.9 2.6E-05 8.7E-10 69.1 8.5 60 113-192 124-183 (283)
18 2g1u_A Hypothetical protein TM 97.8 0.00021 7.1E-09 56.5 11.1 92 115-234 18-113 (155)
19 1kyq_A Met8P, siroheme biosynt 97.7 9.8E-05 3.3E-09 65.3 8.4 110 113-234 10-137 (274)
20 2hmt_A YUAA protein; RCK, KTN, 97.7 0.00015 5.1E-09 55.3 8.3 91 115-234 5-99 (144)
21 3tnl_A Shikimate dehydrogenase 97.6 0.00024 8.2E-09 63.9 9.5 37 113-149 151-187 (315)
22 1pjq_A CYSG, siroheme synthase 97.6 0.0004 1.4E-08 65.1 11.3 92 113-234 9-100 (457)
23 3llv_A Exopolyphosphatase-rela 97.5 0.00016 5.5E-09 55.9 6.7 89 117-234 7-98 (141)
24 4ina_A Saccharopine dehydrogen 97.5 0.00048 1.6E-08 63.4 9.9 97 117-235 2-104 (405)
25 1id1_A Putative potassium chan 97.4 0.0011 3.7E-08 52.1 10.3 89 117-230 4-95 (153)
26 3tum_A Shikimate dehydrogenase 97.4 0.00062 2.1E-08 59.8 9.3 57 114-190 123-179 (269)
27 3abi_A Putative uncharacterize 97.4 0.00064 2.2E-08 61.4 9.6 88 116-235 16-105 (365)
28 3t4e_A Quinate/shikimate dehyd 97.4 0.00059 2E-08 61.2 8.8 37 113-149 145-181 (312)
29 1lss_A TRK system potassium up 97.3 0.001 3.5E-08 50.4 8.6 88 117-232 5-95 (140)
30 3c85_A Putative glutathione-re 97.2 0.00088 3E-08 54.0 7.0 88 115-231 38-130 (183)
31 3fwz_A Inner membrane protein 97.2 0.001 3.4E-08 51.8 7.1 85 117-230 8-95 (140)
32 2z2v_A Hypothetical protein PH 97.2 0.0023 7.8E-08 58.3 10.4 89 115-235 15-105 (365)
33 3l4b_C TRKA K+ channel protien 97.1 0.0023 8E-08 53.1 8.9 88 118-233 2-93 (218)
34 2ph5_A Homospermidine synthase 97.0 0.0034 1.2E-07 59.5 10.0 90 117-235 14-111 (480)
35 3pwz_A Shikimate dehydrogenase 97.0 0.0021 7.1E-08 56.4 7.9 37 113-149 117-153 (272)
36 3vku_A L-LDH, L-lactate dehydr 96.9 0.002 6.8E-08 58.1 7.6 77 115-216 8-86 (326)
37 3e8x_A Putative NAD-dependent 96.9 0.0035 1.2E-07 52.1 8.6 91 114-233 19-124 (236)
38 3o8q_A Shikimate 5-dehydrogena 96.9 0.0026 9E-08 56.0 8.2 37 113-149 123-159 (281)
39 3gvi_A Malate dehydrogenase; N 96.9 0.0039 1.3E-07 56.1 9.4 75 115-215 6-84 (324)
40 3oj0_A Glutr, glutamyl-tRNA re 96.9 0.0011 3.7E-08 51.7 5.0 33 116-149 21-53 (144)
41 3pqe_A L-LDH, L-lactate dehydr 96.8 0.0042 1.4E-07 55.9 9.0 75 116-215 5-82 (326)
42 2x0j_A Malate dehydrogenase; o 96.7 0.009 3.1E-07 53.1 10.4 72 118-215 2-78 (294)
43 2aef_A Calcium-gated potassium 96.7 0.0019 6.4E-08 54.2 5.5 86 117-233 10-98 (234)
44 2d4a_B Malate dehydrogenase; a 96.7 0.0095 3.2E-07 52.9 10.4 72 118-215 1-76 (308)
45 1ldn_A L-lactate dehydrogenase 96.7 0.0086 2.9E-07 53.2 10.0 73 116-215 6-83 (316)
46 3p7m_A Malate dehydrogenase; p 96.7 0.0071 2.4E-07 54.2 9.2 74 116-215 5-82 (321)
47 4g65_A TRK system potassium up 96.6 0.0026 8.9E-08 59.7 6.4 88 118-233 5-96 (461)
48 3dhn_A NAD-dependent epimerase 96.6 0.011 3.7E-07 48.4 9.4 89 117-235 5-108 (227)
49 2hk9_A Shikimate dehydrogenase 96.6 0.0099 3.4E-07 51.6 9.5 36 114-150 127-162 (275)
50 3don_A Shikimate dehydrogenase 96.5 0.0066 2.3E-07 53.4 8.0 110 113-235 114-230 (277)
51 1hdo_A Biliverdin IX beta redu 96.5 0.02 6.9E-07 45.7 10.3 88 117-233 4-104 (206)
52 3ruf_A WBGU; rossmann fold, UD 96.5 0.013 4.5E-07 51.1 9.6 101 114-235 23-147 (351)
53 1lu9_A Methylene tetrahydromet 96.5 0.0089 3E-07 51.9 8.3 78 114-215 117-197 (287)
54 1hyh_A L-hicdh, L-2-hydroxyiso 96.5 0.019 6.6E-07 50.4 10.5 74 118-218 3-81 (309)
55 4e12_A Diketoreductase; oxidor 96.4 0.011 3.7E-07 51.3 8.7 34 116-150 4-37 (283)
56 2dc1_A L-aspartate dehydrogena 96.4 0.013 4.5E-07 49.4 8.9 32 118-149 2-33 (236)
57 1ez4_A Lactate dehydrogenase; 96.4 0.018 6.1E-07 51.4 10.2 73 117-216 6-82 (318)
58 3d0o_A L-LDH 1, L-lactate dehy 96.4 0.02 6.9E-07 50.9 10.2 73 116-215 6-83 (317)
59 3d1l_A Putative NADP oxidoredu 96.4 0.0037 1.3E-07 53.3 5.2 79 117-227 11-89 (266)
60 3tl2_A Malate dehydrogenase; c 96.4 0.016 5.4E-07 51.8 9.4 35 115-149 7-41 (315)
61 1oju_A MDH, malate dehydrogena 96.4 0.018 6E-07 51.0 9.7 72 118-215 2-78 (294)
62 2v6b_A L-LDH, L-lactate dehydr 96.3 0.013 4.5E-07 51.7 8.8 72 118-216 2-77 (304)
63 3dqp_A Oxidoreductase YLBE; al 96.3 0.027 9.2E-07 46.0 10.1 85 118-233 2-99 (219)
64 3fi9_A Malate dehydrogenase; s 96.3 0.015 5E-07 52.7 9.1 76 116-216 8-86 (343)
65 3l9w_A Glutathione-regulated p 96.3 0.0045 1.5E-07 57.3 5.8 87 117-232 5-94 (413)
66 3nep_X Malate dehydrogenase; h 96.3 0.018 6.2E-07 51.5 9.5 73 118-216 2-79 (314)
67 2ewd_A Lactate dehydrogenase,; 96.3 0.025 8.7E-07 49.9 10.4 33 117-149 5-37 (317)
68 3i6i_A Putative leucoanthocyan 96.3 0.0099 3.4E-07 52.2 7.6 97 117-235 11-115 (346)
69 2gn4_A FLAA1 protein, UDP-GLCN 96.3 0.05 1.7E-06 48.1 12.3 78 114-215 19-100 (344)
70 2zqz_A L-LDH, L-lactate dehydr 96.2 0.021 7.1E-07 51.2 9.6 75 115-216 8-86 (326)
71 4aj2_A L-lactate dehydrogenase 96.2 0.02 6.8E-07 51.6 9.5 75 115-215 18-96 (331)
72 1ur5_A Malate dehydrogenase; o 96.2 0.031 1.1E-06 49.4 10.7 74 117-216 3-80 (309)
73 2raf_A Putative dinucleotide-b 96.2 0.016 5.4E-07 48.2 8.3 34 115-149 18-51 (209)
74 2axq_A Saccharopine dehydrogen 96.2 0.011 3.9E-07 55.5 8.1 37 113-149 20-56 (467)
75 3h2s_A Putative NADH-flavin re 96.2 0.0079 2.7E-07 49.1 6.3 89 118-235 2-101 (224)
76 1t2d_A LDH-P, L-lactate dehydr 96.2 0.031 1.1E-06 49.9 10.5 33 117-149 5-37 (322)
77 4egb_A DTDP-glucose 4,6-dehydr 96.2 0.012 4E-07 51.3 7.6 99 115-235 23-145 (346)
78 2egg_A AROE, shikimate 5-dehyd 96.2 0.005 1.7E-07 54.3 5.2 114 114-235 139-260 (297)
79 3m2p_A UDP-N-acetylglucosamine 96.2 0.04 1.4E-06 47.3 10.8 88 117-236 3-106 (311)
80 1a5z_A L-lactate dehydrogenase 96.1 0.012 4.2E-07 52.2 7.5 72 118-216 2-77 (319)
81 3fbt_A Chorismate mutase and s 96.1 0.0051 1.7E-07 54.3 4.9 109 114-235 120-234 (282)
82 3qsg_A NAD-binding phosphogluc 96.1 0.018 6E-07 50.8 8.3 33 117-149 25-57 (312)
83 1p9l_A Dihydrodipicolinate red 96.1 0.015 5E-07 50.3 7.6 94 118-236 2-101 (245)
84 2ejw_A HDH, homoserine dehydro 96.1 0.017 5.7E-07 52.1 8.2 84 117-236 4-96 (332)
85 3gt0_A Pyrroline-5-carboxylate 96.1 0.0095 3.2E-07 50.5 6.1 33 117-149 3-38 (247)
86 1ks9_A KPA reductase;, 2-dehyd 96.0 0.0082 2.8E-07 51.2 5.7 32 118-150 2-33 (291)
87 2xxj_A L-LDH, L-lactate dehydr 96.0 0.024 8.2E-07 50.3 8.8 71 118-215 2-76 (310)
88 2pzm_A Putative nucleotide sug 96.0 0.035 1.2E-06 48.3 9.7 35 114-149 18-53 (330)
89 1ff9_A Saccharopine reductase; 96.0 0.034 1.2E-06 51.9 10.1 34 116-150 3-36 (450)
90 3ldh_A Lactate dehydrogenase; 96.0 0.032 1.1E-06 50.3 9.6 75 115-215 20-98 (330)
91 3tri_A Pyrroline-5-carboxylate 96.0 0.0073 2.5E-07 52.6 5.2 80 117-228 4-85 (280)
92 3nzo_A UDP-N-acetylglucosamine 96.0 0.063 2.2E-06 48.6 11.7 82 114-215 33-121 (399)
93 3kkj_A Amine oxidase, flavin-c 96.0 0.0073 2.5E-07 47.8 4.7 31 118-149 4-34 (336)
94 1qyc_A Phenylcoumaran benzylic 96.0 0.026 9E-07 48.2 8.6 98 117-234 5-108 (308)
95 1y6j_A L-lactate dehydrogenase 95.9 0.011 3.8E-07 52.6 6.3 33 117-149 8-41 (318)
96 1pzg_A LDH, lactate dehydrogen 95.9 0.029 1E-06 50.2 9.0 33 117-149 10-42 (331)
97 3rku_A Oxidoreductase YMR226C; 95.9 0.045 1.5E-06 47.4 10.0 82 114-215 31-124 (287)
98 2bka_A CC3, TAT-interacting pr 95.9 0.061 2.1E-06 44.2 10.4 74 115-216 17-94 (242)
99 3e48_A Putative nucleoside-dip 95.9 0.06 2E-06 45.6 10.5 88 118-233 2-99 (289)
100 2hjr_A Malate dehydrogenase; m 95.9 0.034 1.2E-06 49.7 9.2 33 117-149 15-47 (328)
101 1y1p_A ARII, aldehyde reductas 95.9 0.096 3.3E-06 45.0 11.9 79 115-215 10-92 (342)
102 4ezb_A Uncharacterized conserv 95.8 0.026 8.8E-07 50.0 8.2 34 117-150 25-58 (317)
103 3ggo_A Prephenate dehydrogenas 95.8 0.014 4.8E-07 51.8 6.4 34 116-149 33-67 (314)
104 2g5c_A Prephenate dehydrogenas 95.8 0.015 5E-07 49.9 6.3 32 118-149 3-35 (281)
105 3ew7_A LMO0794 protein; Q8Y8U8 95.8 0.022 7.5E-07 46.1 7.1 85 118-232 2-95 (221)
106 1qyd_A Pinoresinol-lariciresin 95.8 0.041 1.4E-06 47.1 9.1 96 117-233 5-110 (313)
107 1x7d_A Ornithine cyclodeaminas 95.8 0.038 1.3E-06 50.0 9.3 76 115-216 128-204 (350)
108 2gas_A Isoflavone reductase; N 95.8 0.07 2.4E-06 45.4 10.6 98 117-234 3-107 (307)
109 2h78_A Hibadh, 3-hydroxyisobut 95.8 0.024 8.2E-07 49.2 7.6 33 117-150 4-36 (302)
110 4gx0_A TRKA domain protein; me 95.8 0.056 1.9E-06 51.2 10.8 84 117-233 349-435 (565)
111 2rcy_A Pyrroline carboxylate r 95.8 0.013 4.4E-07 49.6 5.6 33 117-149 5-40 (262)
112 1iy8_A Levodione reductase; ox 95.7 0.072 2.5E-06 45.1 10.3 80 114-214 11-100 (267)
113 2x4g_A Nucleoside-diphosphate- 95.7 0.054 1.9E-06 46.8 9.7 89 118-235 15-122 (342)
114 1guz_A Malate dehydrogenase; o 95.7 0.069 2.4E-06 47.0 10.5 32 118-149 2-34 (310)
115 2pv7_A T-protein [includes: ch 95.7 0.02 6.7E-07 50.1 6.9 32 117-149 22-54 (298)
116 3gpi_A NAD-dependent epimerase 95.7 0.038 1.3E-06 46.9 8.5 31 117-148 4-34 (286)
117 3nyw_A Putative oxidoreductase 95.7 0.053 1.8E-06 45.8 9.3 81 114-215 5-96 (250)
118 3u62_A Shikimate dehydrogenase 95.7 0.014 4.6E-07 50.6 5.6 106 114-233 107-216 (253)
119 3phh_A Shikimate dehydrogenase 95.7 0.014 4.6E-07 51.3 5.7 34 116-150 118-151 (269)
120 3qvo_A NMRA family protein; st 95.7 0.08 2.7E-06 43.9 10.1 90 116-233 23-118 (236)
121 4id9_A Short-chain dehydrogena 95.6 0.042 1.4E-06 47.8 8.7 36 113-149 16-52 (347)
122 3t4x_A Oxidoreductase, short c 95.6 0.078 2.7E-06 45.0 10.2 81 114-215 8-94 (267)
123 1xg5_A ARPG836; short chain de 95.6 0.086 2.9E-06 44.8 10.4 81 114-215 30-120 (279)
124 3r6d_A NAD-dependent epimerase 95.6 0.041 1.4E-06 44.9 8.1 90 117-233 6-101 (221)
125 2f1k_A Prephenate dehydrogenas 95.6 0.014 4.7E-07 49.9 5.2 31 118-149 2-32 (279)
126 1bg6_A N-(1-D-carboxylethyl)-L 95.6 0.028 9.7E-07 49.4 7.4 32 117-149 5-36 (359)
127 1dih_A Dihydrodipicolinate red 95.6 0.053 1.8E-06 47.3 9.0 92 117-236 6-101 (273)
128 3pef_A 6-phosphogluconate dehy 95.6 0.0096 3.3E-07 51.5 4.1 35 117-152 2-36 (287)
129 4g65_A TRK system potassium up 95.5 0.088 3E-06 49.2 11.0 93 115-235 234-329 (461)
130 3o38_A Short chain dehydrogena 95.5 0.059 2E-06 45.4 8.9 80 114-215 20-110 (266)
131 1sby_A Alcohol dehydrogenase; 95.5 0.11 3.8E-06 43.4 10.5 80 114-215 3-93 (254)
132 3lf2_A Short chain oxidoreduct 95.5 0.092 3.1E-06 44.5 10.0 81 114-215 6-96 (265)
133 2jl1_A Triphenylmethane reduct 95.4 0.021 7.2E-07 48.3 5.8 89 118-235 2-103 (287)
134 2i99_A MU-crystallin homolog; 95.4 0.028 9.6E-07 49.7 6.8 36 115-150 134-170 (312)
135 2ahr_A Putative pyrroline carb 95.4 0.025 8.4E-07 47.9 6.2 32 117-149 4-35 (259)
136 4dll_A 2-hydroxy-3-oxopropiona 95.4 0.021 7E-07 50.5 5.8 35 115-150 30-64 (320)
137 3evn_A Oxidoreductase, GFO/IDH 95.4 0.05 1.7E-06 47.9 8.3 36 116-151 5-41 (329)
138 1sb8_A WBPP; epimerase, 4-epim 95.4 0.097 3.3E-06 45.7 10.1 83 115-215 26-111 (352)
139 3g0o_A 3-hydroxyisobutyrate de 95.4 0.048 1.6E-06 47.5 8.1 33 117-150 8-40 (303)
140 3obb_A Probable 3-hydroxyisobu 95.4 0.1 3.4E-06 46.0 10.2 105 117-235 4-119 (300)
141 2r6j_A Eugenol synthase 1; phe 95.4 0.062 2.1E-06 46.3 8.7 93 117-234 12-110 (318)
142 3qlj_A Short chain dehydrogena 95.3 0.1 3.5E-06 45.6 10.2 90 113-215 24-123 (322)
143 3ehe_A UDP-glucose 4-epimerase 95.3 0.068 2.3E-06 45.8 8.9 28 118-147 3-31 (313)
144 3c1o_A Eugenol synthase; pheny 95.3 0.056 1.9E-06 46.5 8.3 98 117-234 5-108 (321)
145 3e03_A Short chain dehydrogena 95.3 0.18 6.2E-06 42.9 11.4 86 114-215 4-99 (274)
146 2q1s_A Putative nucleotide sug 95.3 0.11 3.9E-06 46.0 10.5 75 114-215 30-108 (377)
147 3ko8_A NAD-dependent epimerase 95.3 0.095 3.3E-06 44.7 9.6 31 118-149 2-33 (312)
148 1omo_A Alanine dehydrogenase; 95.3 0.085 2.9E-06 46.9 9.6 73 115-216 124-197 (322)
149 1o6z_A MDH, malate dehydrogena 95.3 0.096 3.3E-06 46.1 9.8 73 118-215 2-79 (303)
150 3lk7_A UDP-N-acetylmuramoylala 95.3 0.061 2.1E-06 49.8 8.9 93 114-235 7-100 (451)
151 3ius_A Uncharacterized conserv 95.3 0.062 2.1E-06 45.4 8.2 81 117-229 6-90 (286)
152 3sc4_A Short chain dehydrogena 95.3 0.16 5.6E-06 43.6 11.0 86 114-215 7-102 (285)
153 2b69_A UDP-glucuronate decarbo 95.2 0.13 4.3E-06 44.8 10.4 33 115-148 26-59 (343)
154 2c5a_A GDP-mannose-3', 5'-epim 95.2 0.1 3.5E-06 46.3 10.0 32 117-149 30-62 (379)
155 2cvz_A Dehydrogenase, 3-hydrox 95.2 0.059 2E-06 45.9 8.0 30 118-149 3-32 (289)
156 4gbj_A 6-phosphogluconate dehy 95.2 0.19 6.6E-06 44.0 11.5 105 117-235 6-119 (297)
157 2z1n_A Dehydrogenase; reductas 95.2 0.14 4.8E-06 43.0 10.3 34 114-148 5-39 (260)
158 3q2i_A Dehydrogenase; rossmann 95.2 0.063 2.2E-06 47.7 8.4 33 116-148 13-47 (354)
159 3b1f_A Putative prephenate deh 95.2 0.018 6.2E-07 49.5 4.6 33 117-149 7-40 (290)
160 3hhp_A Malate dehydrogenase; M 95.1 0.085 2.9E-06 47.0 9.0 74 118-215 2-78 (312)
161 4f3y_A DHPR, dihydrodipicolina 95.1 0.08 2.7E-06 46.3 8.7 92 117-235 8-101 (272)
162 3enk_A UDP-glucose 4-epimerase 95.1 0.11 3.7E-06 44.9 9.5 31 117-148 6-37 (341)
163 4dgs_A Dehydrogenase; structur 95.1 0.039 1.3E-06 49.9 6.8 36 113-149 168-203 (340)
164 1lnq_A MTHK channels, potassiu 95.1 0.02 6.7E-07 50.6 4.7 87 116-233 115-204 (336)
165 4e21_A 6-phosphogluconate dehy 95.1 0.038 1.3E-06 50.1 6.6 110 116-235 22-137 (358)
166 3vps_A TUNA, NAD-dependent epi 95.1 0.098 3.3E-06 44.5 8.9 35 115-150 6-41 (321)
167 1i36_A Conserved hypothetical 95.0 0.077 2.6E-06 44.8 8.1 29 118-147 2-30 (264)
168 3euw_A MYO-inositol dehydrogen 95.0 0.11 3.7E-06 45.9 9.3 87 117-236 5-94 (344)
169 3m6i_A L-arabinitol 4-dehydrog 95.0 0.051 1.8E-06 48.3 7.2 34 115-148 179-212 (363)
170 3sxp_A ADP-L-glycero-D-mannohe 95.0 0.16 5.4E-06 44.6 10.4 107 114-236 8-135 (362)
171 3pxx_A Carveol dehydrogenase; 95.0 0.21 7.3E-06 42.3 10.9 92 113-215 7-108 (287)
172 3hwr_A 2-dehydropantoate 2-red 95.0 0.028 9.4E-07 49.6 5.3 31 115-146 18-48 (318)
173 1yb4_A Tartronic semialdehyde 95.0 0.044 1.5E-06 47.0 6.4 32 117-150 4-35 (295)
174 3db2_A Putative NADPH-dependen 94.9 0.07 2.4E-06 47.4 7.9 33 116-148 5-38 (354)
175 2vt3_A REX, redox-sensing tran 94.9 0.12 4.1E-06 43.7 8.9 87 116-235 85-173 (215)
176 3pdu_A 3-hydroxyisobutyrate de 94.9 0.022 7.6E-07 49.2 4.3 33 118-151 3-35 (287)
177 3ec7_A Putative dehydrogenase; 94.9 0.12 4E-06 46.2 9.2 34 115-148 22-57 (357)
178 4huj_A Uncharacterized protein 94.9 0.0086 2.9E-07 50.1 1.6 32 117-149 24-56 (220)
179 3slg_A PBGP3 protein; structur 94.9 0.069 2.3E-06 47.0 7.6 95 114-236 22-138 (372)
180 3gg2_A Sugar dehydrogenase, UD 94.8 0.075 2.6E-06 49.5 8.1 38 118-156 4-41 (450)
181 3pk0_A Short-chain dehydrogena 94.8 0.13 4.6E-06 43.5 9.1 79 114-214 8-96 (262)
182 3qiv_A Short-chain dehydrogena 94.8 0.19 6.5E-06 41.8 9.9 78 114-214 7-94 (253)
183 2wm3_A NMRA-like family domain 94.8 0.25 8.7E-06 42.0 10.9 91 117-233 6-108 (299)
184 3ijp_A DHPR, dihydrodipicolina 94.8 0.14 4.8E-06 45.3 9.3 32 117-148 22-55 (288)
185 3rc1_A Sugar 3-ketoreductase; 94.8 0.13 4.4E-06 45.8 9.2 34 115-148 26-61 (350)
186 3o26_A Salutaridine reductase; 94.7 0.15 5.1E-06 43.3 9.3 79 115-215 11-100 (311)
187 1gpj_A Glutamyl-tRNA reductase 94.7 0.035 1.2E-06 50.9 5.5 35 114-148 165-199 (404)
188 3mz0_A Inositol 2-dehydrogenas 94.7 0.09 3.1E-06 46.5 8.1 32 117-148 3-36 (344)
189 3hdj_A Probable ornithine cycl 94.7 0.074 2.5E-06 47.3 7.5 34 116-149 121-155 (313)
190 1f06_A MESO-diaminopimelate D- 94.7 0.08 2.7E-06 46.9 7.6 33 117-149 4-37 (320)
191 3kvo_A Hydroxysteroid dehydrog 94.7 0.24 8.4E-06 44.2 10.8 87 113-215 42-138 (346)
192 3sx2_A Putative 3-ketoacyl-(ac 94.7 0.32 1.1E-05 41.2 11.1 92 113-215 10-111 (278)
193 4hkt_A Inositol 2-dehydrogenas 94.7 0.12 4.2E-06 45.3 8.7 33 117-149 4-37 (331)
194 2q1w_A Putative nucleotide sug 94.6 0.18 6.3E-06 43.7 9.8 34 115-149 20-54 (333)
195 3awd_A GOX2181, putative polyo 94.6 0.22 7.6E-06 41.3 9.9 34 114-148 11-45 (260)
196 3qha_A Putative oxidoreductase 94.6 0.035 1.2E-06 48.4 5.0 33 117-150 16-48 (296)
197 2z1m_A GDP-D-mannose dehydrata 94.6 0.12 4.1E-06 44.5 8.4 32 116-148 3-35 (345)
198 1nyt_A Shikimate 5-dehydrogena 94.6 0.04 1.4E-06 47.6 5.3 36 114-150 117-152 (271)
199 3qy9_A DHPR, dihydrodipicolina 94.6 0.092 3.2E-06 45.2 7.5 33 117-150 4-37 (243)
200 3doj_A AT3G25530, dehydrogenas 94.6 0.04 1.4E-06 48.3 5.3 35 117-152 22-56 (310)
201 1fmc_A 7 alpha-hydroxysteroid 94.6 0.15 5.1E-06 42.2 8.6 78 114-214 9-96 (255)
202 2y0c_A BCEC, UDP-glucose dehyd 94.6 0.15 5E-06 47.9 9.4 39 117-156 9-47 (478)
203 3rft_A Uronate dehydrogenase; 94.6 0.14 4.9E-06 43.2 8.6 32 117-149 4-36 (267)
204 3d4o_A Dipicolinate synthase s 94.6 0.043 1.5E-06 47.9 5.4 37 113-150 152-188 (293)
205 3ioy_A Short-chain dehydrogena 94.6 0.15 5.3E-06 44.6 9.1 81 114-215 6-96 (319)
206 3uuw_A Putative oxidoreductase 94.5 0.12 4.2E-06 44.8 8.3 33 116-148 6-40 (308)
207 3uve_A Carveol dehydrogenase ( 94.5 0.39 1.3E-05 40.9 11.3 96 113-215 8-113 (286)
208 4h7p_A Malate dehydrogenase; s 94.5 0.22 7.6E-06 45.0 10.1 95 97-215 8-109 (345)
209 3pgx_A Carveol dehydrogenase; 94.5 0.23 8E-06 42.2 9.8 93 113-215 12-114 (280)
210 1vl6_A Malate oxidoreductase; 94.4 0.046 1.6E-06 50.4 5.5 37 113-149 189-225 (388)
211 3svt_A Short-chain type dehydr 94.4 0.28 9.7E-06 41.7 10.3 81 114-215 9-100 (281)
212 3ai3_A NADPH-sorbose reductase 94.4 0.22 7.6E-06 41.8 9.5 34 114-148 5-39 (263)
213 2d5c_A AROE, shikimate 5-dehyd 94.4 0.041 1.4E-06 47.0 4.9 36 113-150 114-149 (263)
214 1npy_A Hypothetical shikimate 94.4 0.039 1.3E-06 48.1 4.8 34 116-149 119-152 (271)
215 4f6c_A AUSA reductase domain p 94.4 0.097 3.3E-06 47.3 7.6 104 115-236 68-194 (427)
216 3ing_A Homoserine dehydrogenas 94.4 0.16 5.5E-06 45.5 8.8 24 115-138 3-26 (325)
217 3aoe_E Glutamate dehydrogenase 94.4 0.22 7.6E-06 46.3 10.0 37 113-149 215-251 (419)
218 3ip1_A Alcohol dehydrogenase, 94.3 0.085 2.9E-06 47.8 7.1 34 115-148 213-246 (404)
219 3e9m_A Oxidoreductase, GFO/IDH 94.3 0.11 3.8E-06 45.7 7.7 33 116-148 5-38 (330)
220 2glx_A 1,5-anhydro-D-fructose 94.3 0.14 4.8E-06 44.7 8.3 32 118-149 2-34 (332)
221 1orr_A CDP-tyvelose-2-epimeras 94.3 0.18 6.3E-06 43.4 8.9 30 118-148 3-33 (347)
222 3gaf_A 7-alpha-hydroxysteroid 94.3 0.22 7.7E-06 41.9 9.3 78 114-214 10-97 (256)
223 2rir_A Dipicolinate synthase, 94.3 0.053 1.8E-06 47.4 5.4 37 113-150 154-190 (300)
224 2ixa_A Alpha-N-acetylgalactosa 94.3 0.12 4.1E-06 47.6 8.1 98 115-236 19-120 (444)
225 3s55_A Putative short-chain de 94.3 0.41 1.4E-05 40.6 10.9 91 114-215 8-108 (281)
226 1u8x_X Maltose-6'-phosphate gl 94.2 0.27 9.2E-06 46.3 10.5 80 116-216 28-112 (472)
227 2vhw_A Alanine dehydrogenase; 94.2 0.061 2.1E-06 48.8 5.9 37 113-150 165-201 (377)
228 3tjr_A Short chain dehydrogena 94.2 0.25 8.6E-06 42.8 9.6 79 114-215 29-117 (301)
229 2bd0_A Sepiapterin reductase; 94.2 0.32 1.1E-05 40.0 9.9 32 117-148 3-41 (244)
230 3i1j_A Oxidoreductase, short c 94.2 0.27 9.3E-06 40.6 9.4 35 114-149 12-47 (247)
231 1oc2_A DTDP-glucose 4,6-dehydr 94.2 0.41 1.4E-05 41.4 10.8 97 117-236 5-122 (348)
232 3h7a_A Short chain dehydrogena 94.1 0.19 6.5E-06 42.3 8.5 35 114-149 5-40 (252)
233 3nkl_A UDP-D-quinovosamine 4-d 94.1 0.26 8.9E-06 37.4 8.5 89 115-235 3-96 (141)
234 2zcu_A Uncharacterized oxidore 94.1 0.072 2.5E-06 44.8 5.8 87 118-233 1-97 (286)
235 1xq6_A Unknown protein; struct 94.1 0.18 6E-06 41.3 8.0 34 116-149 4-39 (253)
236 1p77_A Shikimate 5-dehydrogena 94.1 0.042 1.4E-06 47.5 4.3 35 114-149 117-151 (272)
237 1lld_A L-lactate dehydrogenase 94.1 0.053 1.8E-06 47.3 5.1 33 117-149 8-41 (319)
238 1rkx_A CDP-glucose-4,6-dehydra 94.1 0.19 6.5E-06 43.8 8.6 34 115-149 8-42 (357)
239 1yb1_A 17-beta-hydroxysteroid 94.1 0.3 1E-05 41.4 9.7 34 114-148 29-63 (272)
240 3l77_A Short-chain alcohol deh 94.1 0.33 1.1E-05 39.8 9.7 77 117-215 3-89 (235)
241 4ea9_A Perosamine N-acetyltran 94.1 0.31 1.1E-05 40.2 9.5 86 116-234 12-98 (220)
242 4hb9_A Similarities with proba 94.1 0.048 1.6E-06 47.9 4.7 32 117-149 2-33 (412)
243 3rkr_A Short chain oxidoreduct 94.1 0.22 7.6E-06 41.9 8.7 79 114-215 27-115 (262)
244 1wma_A Carbonyl reductase [NAD 94.1 0.19 6.4E-06 41.7 8.2 33 115-148 3-37 (276)
245 2a9f_A Putative malic enzyme ( 94.1 0.062 2.1E-06 49.7 5.5 38 113-150 185-222 (398)
246 3k96_A Glycerol-3-phosphate de 94.0 0.042 1.5E-06 49.6 4.3 32 117-149 30-61 (356)
247 1hye_A L-lactate/malate dehydr 94.0 0.22 7.6E-06 43.9 8.9 76 118-215 2-83 (313)
248 3afn_B Carbonyl reductase; alp 94.0 0.19 6.4E-06 41.6 8.0 80 114-215 5-94 (258)
249 3ezy_A Dehydrogenase; structur 94.0 0.086 2.9E-06 46.6 6.2 32 117-148 3-35 (344)
250 3aog_A Glutamate dehydrogenase 94.0 0.42 1.4E-05 44.7 11.1 37 113-149 232-268 (440)
251 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.058 2E-06 46.9 5.0 32 117-149 16-47 (302)
252 3fef_A Putative glucosidase LP 94.0 0.062 2.1E-06 50.4 5.5 93 116-232 5-103 (450)
253 2jah_A Clavulanic acid dehydro 94.0 0.38 1.3E-05 40.2 9.9 78 114-214 5-92 (247)
254 1yxm_A Pecra, peroxisomal tran 94.0 0.29 1E-05 41.8 9.4 34 114-148 16-50 (303)
255 4fn4_A Short chain dehydrogena 94.0 0.36 1.2E-05 41.6 10.0 79 113-214 4-92 (254)
256 3tsc_A Putative oxidoreductase 93.9 0.31 1.1E-05 41.4 9.5 93 113-215 8-110 (277)
257 1pl8_A Human sorbitol dehydrog 93.9 0.11 3.8E-06 46.1 6.8 34 115-148 171-204 (356)
258 3uko_A Alcohol dehydrogenase c 93.9 0.063 2.2E-06 48.1 5.3 34 115-148 193-226 (378)
259 1r6d_A TDP-glucose-4,6-dehydra 93.9 0.54 1.8E-05 40.5 11.1 94 118-235 2-123 (337)
260 1obb_A Maltase, alpha-glucosid 93.9 0.33 1.1E-05 45.8 10.4 94 117-231 4-104 (480)
261 4ibo_A Gluconate dehydrogenase 93.9 0.21 7.3E-06 42.6 8.4 35 113-148 23-58 (271)
262 1y81_A Conserved hypothetical 93.9 0.6 2.1E-05 36.3 10.4 34 115-149 13-50 (138)
263 3dtt_A NADP oxidoreductase; st 93.9 0.069 2.4E-06 45.2 5.2 36 114-150 17-52 (245)
264 2dvm_A Malic enzyme, 439AA lon 93.9 0.054 1.8E-06 50.7 4.8 35 113-147 183-219 (439)
265 2ae2_A Protein (tropinone redu 93.9 0.52 1.8E-05 39.5 10.6 34 114-148 7-41 (260)
266 2dq4_A L-threonine 3-dehydroge 93.8 0.047 1.6E-06 48.2 4.2 35 115-149 164-198 (343)
267 4fc7_A Peroxisomal 2,4-dienoyl 93.8 0.27 9.1E-06 41.9 8.9 34 114-148 25-59 (277)
268 3eag_A UDP-N-acetylmuramate:L- 93.8 0.4 1.4E-05 42.3 10.3 88 117-235 5-94 (326)
269 1xu9_A Corticosteroid 11-beta- 93.8 0.34 1.2E-05 41.3 9.6 78 114-213 26-113 (286)
270 2ywl_A Thioredoxin reductase r 93.8 0.075 2.6E-06 41.9 5.0 32 118-150 3-34 (180)
271 2ew2_A 2-dehydropantoate 2-red 93.8 0.064 2.2E-06 46.0 4.9 31 118-149 5-35 (316)
272 2hq1_A Glucose/ribitol dehydro 93.8 0.42 1.4E-05 39.3 9.9 32 115-147 4-36 (247)
273 2zat_A Dehydrogenase/reductase 93.8 0.34 1.2E-05 40.5 9.3 34 114-148 12-46 (260)
274 1s6y_A 6-phospho-beta-glucosid 93.7 0.28 9.7E-06 45.8 9.5 77 117-216 8-93 (450)
275 2pnf_A 3-oxoacyl-[acyl-carrier 93.7 0.3 1E-05 40.1 8.8 34 114-148 5-39 (248)
276 2eez_A Alanine dehydrogenase; 93.7 0.091 3.1E-06 47.4 5.9 36 113-149 163-198 (369)
277 1ek6_A UDP-galactose 4-epimera 93.7 0.33 1.1E-05 42.0 9.3 31 117-148 3-34 (348)
278 1oaa_A Sepiapterin reductase; 93.7 0.25 8.4E-06 41.4 8.2 64 114-198 4-71 (259)
279 1b8p_A Protein (malate dehydro 93.7 0.29 9.9E-06 43.4 9.1 79 117-215 6-92 (329)
280 2iz1_A 6-phosphogluconate dehy 93.6 0.31 1.1E-05 45.4 9.7 32 117-149 6-37 (474)
281 3oz2_A Digeranylgeranylglycero 93.6 0.061 2.1E-06 46.8 4.5 31 117-148 5-35 (397)
282 2fr1_A Erythromycin synthase, 93.6 0.57 1.9E-05 43.8 11.4 81 116-215 226-315 (486)
283 1w6u_A 2,4-dienoyl-COA reducta 93.6 0.25 8.5E-06 42.2 8.3 34 114-148 24-58 (302)
284 3i83_A 2-dehydropantoate 2-red 93.6 0.074 2.5E-06 46.7 5.0 33 117-150 3-35 (320)
285 3upl_A Oxidoreductase; rossman 93.6 0.37 1.3E-05 45.1 10.0 96 115-236 22-137 (446)
286 3tfo_A Putative 3-oxoacyl-(acy 93.6 0.35 1.2E-05 41.2 9.2 77 115-214 3-89 (264)
287 3ay3_A NAD-dependent epimerase 93.5 0.18 6.3E-06 42.2 7.3 32 117-149 3-35 (267)
288 4a2c_A Galactitol-1-phosphate 93.5 0.16 5.4E-06 44.6 7.1 34 115-148 160-193 (346)
289 2bll_A Protein YFBG; decarboxy 93.5 0.4 1.4E-05 41.2 9.6 31 118-149 2-34 (345)
290 2rhc_B Actinorhodin polyketide 93.5 0.46 1.6E-05 40.4 9.9 34 114-148 20-54 (277)
291 2ho3_A Oxidoreductase, GFO/IDH 93.5 0.23 7.9E-06 43.3 8.1 32 118-149 3-35 (325)
292 3fpc_A NADP-dependent alcohol 93.5 0.043 1.5E-06 48.6 3.4 35 115-149 166-200 (352)
293 2hrz_A AGR_C_4963P, nucleoside 93.5 0.46 1.6E-05 41.0 10.0 35 115-149 13-54 (342)
294 1tlt_A Putative oxidoreductase 93.5 0.37 1.2E-05 41.9 9.4 35 116-150 5-41 (319)
295 3ksu_A 3-oxoacyl-acyl carrier 93.5 0.18 6.3E-06 42.7 7.2 83 113-215 8-100 (262)
296 4da9_A Short-chain dehydrogena 93.5 0.46 1.6E-05 40.6 9.8 34 113-147 26-60 (280)
297 1yqg_A Pyrroline-5-carboxylate 93.5 0.084 2.9E-06 44.5 5.0 32 118-149 2-33 (263)
298 2bgk_A Rhizome secoisolaricire 93.5 0.2 6.7E-06 42.1 7.3 34 114-148 14-48 (278)
299 3ucx_A Short chain dehydrogena 93.5 0.43 1.5E-05 40.2 9.5 34 114-148 9-43 (264)
300 1nvt_A Shikimate 5'-dehydrogen 93.5 0.054 1.9E-06 47.0 3.9 34 114-149 126-159 (287)
301 3mw9_A GDH 1, glutamate dehydr 93.5 0.26 8.7E-06 46.9 8.7 61 108-178 236-296 (501)
302 1f8f_A Benzyl alcohol dehydrog 93.5 0.081 2.8E-06 47.2 5.1 34 115-148 190-223 (371)
303 4gwg_A 6-phosphogluconate dehy 93.4 0.1 3.5E-06 49.3 6.0 114 117-235 5-125 (484)
304 3v2h_A D-beta-hydroxybutyrate 93.4 0.23 7.9E-06 42.6 7.8 34 114-148 23-57 (281)
305 1zem_A Xylitol dehydrogenase; 93.4 0.44 1.5E-05 40.1 9.5 34 114-148 5-39 (262)
306 3v8b_A Putative dehydrogenase, 93.4 0.38 1.3E-05 41.3 9.2 36 113-149 25-61 (283)
307 4egf_A L-xylulose reductase; s 93.4 0.32 1.1E-05 41.2 8.6 34 114-148 18-52 (266)
308 3oec_A Carveol dehydrogenase ( 93.4 0.55 1.9E-05 40.9 10.3 92 113-215 43-144 (317)
309 1vl8_A Gluconate 5-dehydrogena 93.4 0.54 1.9E-05 39.8 10.1 34 114-148 19-53 (267)
310 1e3j_A NADP(H)-dependent ketos 93.4 0.19 6.6E-06 44.4 7.5 33 115-148 168-200 (352)
311 2d8a_A PH0655, probable L-thre 93.4 0.07 2.4E-06 47.2 4.5 34 115-148 167-200 (348)
312 3v2g_A 3-oxoacyl-[acyl-carrier 93.4 0.5 1.7E-05 40.3 9.8 80 113-214 28-117 (271)
313 5mdh_A Malate dehydrogenase; o 93.4 0.13 4.4E-06 46.2 6.3 77 117-215 4-88 (333)
314 3gvx_A Glycerate dehydrogenase 93.3 0.11 3.9E-06 45.8 5.8 37 113-150 119-155 (290)
315 1ae1_A Tropinone reductase-I; 93.3 0.64 2.2E-05 39.3 10.4 34 114-148 19-53 (273)
316 3tox_A Short chain dehydrogena 93.3 0.23 8E-06 42.6 7.7 35 114-149 6-41 (280)
317 2gdz_A NAD+-dependent 15-hydro 93.3 0.24 8.1E-06 41.7 7.6 33 115-148 6-39 (267)
318 3ftp_A 3-oxoacyl-[acyl-carrier 93.3 0.33 1.1E-05 41.4 8.5 35 113-148 25-60 (270)
319 2o23_A HADH2 protein; HSD17B10 93.3 0.3 1E-05 40.6 8.2 35 114-149 10-45 (265)
320 3hn2_A 2-dehydropantoate 2-red 93.3 0.075 2.6E-06 46.5 4.5 33 117-150 3-35 (312)
321 1leh_A Leucine dehydrogenase; 93.2 0.097 3.3E-06 47.7 5.3 36 113-149 170-205 (364)
322 4imr_A 3-oxoacyl-(acyl-carrier 93.2 0.18 6E-06 43.2 6.7 35 113-148 30-65 (275)
323 1pjc_A Protein (L-alanine dehy 93.2 0.099 3.4E-06 47.0 5.3 35 114-149 165-199 (361)
324 1gee_A Glucose 1-dehydrogenase 93.2 0.46 1.6E-05 39.5 9.2 79 114-214 5-93 (261)
325 3e18_A Oxidoreductase; dehydro 93.2 0.16 5.6E-06 45.3 6.7 35 115-149 4-39 (359)
326 4ej6_A Putative zinc-binding d 93.2 0.089 3E-06 47.2 5.0 34 115-148 182-215 (370)
327 1yvv_A Amine oxidase, flavin-c 93.2 0.085 2.9E-06 45.3 4.7 33 117-150 3-35 (336)
328 3imf_A Short chain dehydrogena 93.2 0.26 9E-06 41.4 7.7 35 114-149 4-39 (257)
329 1vl0_A DTDP-4-dehydrorhamnose 93.2 0.18 6E-06 42.6 6.6 33 116-149 12-45 (292)
330 3rwb_A TPLDH, pyridoxal 4-dehy 93.2 0.41 1.4E-05 40.0 8.8 35 114-149 4-39 (247)
331 4iin_A 3-ketoacyl-acyl carrier 93.2 0.16 5.6E-06 43.0 6.4 81 113-215 26-116 (271)
332 1geg_A Acetoin reductase; SDR 93.2 0.56 1.9E-05 39.2 9.7 31 117-148 3-34 (256)
333 4a7p_A UDP-glucose dehydrogena 93.2 0.35 1.2E-05 45.1 9.1 39 117-156 9-47 (446)
334 3sju_A Keto reductase; short-c 93.2 0.44 1.5E-05 40.6 9.2 77 115-214 23-109 (279)
335 3uf0_A Short-chain dehydrogena 93.1 0.73 2.5E-05 39.2 10.5 34 113-147 28-62 (273)
336 1ja9_A 4HNR, 1,3,6,8-tetrahydr 93.1 0.38 1.3E-05 40.1 8.6 34 114-148 19-53 (274)
337 1ryi_A Glycine oxidase; flavop 93.1 0.09 3.1E-06 46.1 4.8 35 117-152 18-52 (382)
338 3evt_A Phosphoglycerate dehydr 93.1 0.11 3.8E-06 46.5 5.4 37 113-150 134-170 (324)
339 3cea_A MYO-inositol 2-dehydrog 93.1 0.39 1.3E-05 42.1 8.9 34 116-149 8-43 (346)
340 1c0p_A D-amino acid oxidase; a 93.1 0.098 3.4E-06 45.9 5.0 35 117-152 7-41 (363)
341 3g17_A Similar to 2-dehydropan 93.1 0.07 2.4E-06 46.3 4.0 31 118-149 4-34 (294)
342 1yo6_A Putative carbonyl reduc 93.1 0.32 1.1E-05 39.8 7.9 34 116-149 3-38 (250)
343 3ghy_A Ketopantoate reductase 93.1 0.075 2.6E-06 47.0 4.2 32 117-149 4-35 (335)
344 3dje_A Fructosyl amine: oxygen 93.1 0.096 3.3E-06 47.2 5.0 35 117-151 7-41 (438)
345 3r1i_A Short-chain type dehydr 93.1 0.3 1E-05 41.7 8.0 34 114-148 30-64 (276)
346 3c1a_A Putative oxidoreductase 93.1 0.15 5.1E-06 44.4 6.1 34 117-150 11-45 (315)
347 2vns_A Metalloreductase steap3 93.1 0.098 3.4E-06 43.4 4.7 32 117-149 29-60 (215)
348 3osu_A 3-oxoacyl-[acyl-carrier 93.1 0.46 1.6E-05 39.5 9.0 32 115-147 3-35 (246)
349 2yq5_A D-isomer specific 2-hyd 93.0 0.13 4.5E-06 46.4 5.8 37 113-150 145-181 (343)
350 3c7a_A Octopine dehydrogenase; 93.0 0.075 2.6E-06 48.0 4.2 29 118-147 4-33 (404)
351 4dqv_A Probable peptide synthe 92.9 0.37 1.3E-05 44.5 8.9 116 114-236 71-211 (478)
352 2hun_A 336AA long hypothetical 92.9 0.56 1.9E-05 40.2 9.6 33 117-149 4-38 (336)
353 3u95_A Glycoside hydrolase, fa 92.9 0.22 7.7E-06 46.8 7.5 77 118-215 2-85 (477)
354 3st7_A Capsular polysaccharide 92.9 0.16 5.6E-06 44.7 6.3 31 118-148 2-33 (369)
355 2dpo_A L-gulonate 3-dehydrogen 92.9 0.1 3.5E-06 46.5 4.9 34 116-150 6-39 (319)
356 3k30_A Histamine dehydrogenase 92.9 0.18 6.2E-06 49.0 7.0 35 115-150 390-424 (690)
357 1gy8_A UDP-galactose 4-epimera 92.9 0.56 1.9E-05 41.3 9.8 31 118-149 4-36 (397)
358 3i23_A Oxidoreductase, GFO/IDH 92.9 0.074 2.5E-06 47.3 4.0 88 117-236 3-94 (349)
359 3sc6_A DTDP-4-dehydrorhamnose 92.9 0.27 9.4E-06 41.3 7.4 30 118-148 7-37 (287)
360 4fb5_A Probable oxidoreductase 92.9 0.18 6.1E-06 44.5 6.5 24 114-137 23-46 (393)
361 1xq1_A Putative tropinone redu 92.9 0.43 1.5E-05 39.8 8.6 34 114-148 12-46 (266)
362 3ohs_X Trans-1,2-dihydrobenzen 92.9 0.21 7.3E-06 43.8 6.9 88 117-236 3-95 (334)
363 1mxh_A Pteridine reductase 2; 92.9 0.58 2E-05 39.4 9.4 33 115-148 10-43 (276)
364 2dt5_A AT-rich DNA-binding pro 92.9 0.17 5.7E-06 42.6 5.9 88 115-235 79-168 (211)
365 2ekl_A D-3-phosphoglycerate de 92.9 0.12 4.2E-06 45.7 5.3 36 113-149 139-174 (313)
366 3hg7_A D-isomer specific 2-hyd 92.8 0.14 4.9E-06 45.8 5.7 43 107-150 129-173 (324)
367 3rp8_A Flavoprotein monooxygen 92.8 0.12 4E-06 46.2 5.2 35 115-150 22-56 (407)
368 3t7c_A Carveol dehydrogenase; 92.8 0.94 3.2E-05 39.0 10.9 91 113-215 25-126 (299)
369 3rd5_A Mypaa.01249.C; ssgcid, 92.8 0.21 7.1E-06 42.8 6.6 35 114-149 14-49 (291)
370 2d0i_A Dehydrogenase; structur 92.8 0.096 3.3E-06 46.8 4.6 36 113-149 143-178 (333)
371 2yfq_A Padgh, NAD-GDH, NAD-spe 92.8 0.32 1.1E-05 45.2 8.2 37 113-149 209-245 (421)
372 3gvc_A Oxidoreductase, probabl 92.8 0.36 1.2E-05 41.4 8.1 35 114-149 27-62 (277)
373 3ond_A Adenosylhomocysteinase; 92.8 0.12 4E-06 49.1 5.3 37 113-150 262-298 (488)
374 3cgv_A Geranylgeranyl reductas 92.8 0.1 3.5E-06 45.9 4.7 33 117-150 5-37 (397)
375 1ydw_A AX110P-like protein; st 92.8 0.5 1.7E-05 41.9 9.3 32 117-148 7-39 (362)
376 2czc_A Glyceraldehyde-3-phosph 92.8 0.51 1.7E-05 42.0 9.3 35 201-236 74-108 (334)
377 2uzz_A N-methyl-L-tryptophan o 92.8 0.091 3.1E-06 45.9 4.3 34 117-151 3-36 (372)
378 1wwk_A Phosphoglycerate dehydr 92.8 0.13 4.5E-06 45.4 5.3 37 113-150 139-175 (307)
379 3bio_A Oxidoreductase, GFO/IDH 92.8 0.35 1.2E-05 42.3 8.1 34 116-149 9-43 (304)
380 1j4a_A D-LDH, D-lactate dehydr 92.7 0.13 4.5E-06 45.9 5.4 37 113-150 143-179 (333)
381 1edo_A Beta-keto acyl carrier 92.7 0.66 2.3E-05 38.0 9.4 76 117-214 2-87 (244)
382 3cky_A 2-hydroxymethyl glutara 92.7 0.12 4.2E-06 44.3 5.0 33 117-150 5-37 (301)
383 1cf2_P Protein (glyceraldehyde 92.7 0.27 9.2E-06 44.1 7.4 34 201-235 73-106 (337)
384 2duw_A Putative COA-binding pr 92.7 0.67 2.3E-05 36.2 8.9 34 116-150 13-50 (145)
385 2gf3_A MSOX, monomeric sarcosi 92.7 0.11 3.9E-06 45.5 4.8 34 117-151 4-37 (389)
386 2dbq_A Glyoxylate reductase; D 92.7 0.13 4.6E-06 45.8 5.3 37 113-150 147-183 (334)
387 1vj0_A Alcohol dehydrogenase, 92.7 0.09 3.1E-06 47.2 4.2 34 115-148 195-228 (380)
388 3pp8_A Glyoxylate/hydroxypyruv 92.7 0.12 4.1E-06 46.0 5.0 43 107-150 128-172 (315)
389 3hn7_A UDP-N-acetylmuramate-L- 92.6 0.61 2.1E-05 44.0 10.1 90 115-235 18-108 (524)
390 4iiu_A 3-oxoacyl-[acyl-carrier 92.6 0.36 1.2E-05 40.6 7.8 31 115-145 25-56 (267)
391 2nu8_A Succinyl-COA ligase [AD 92.6 0.98 3.4E-05 39.4 10.8 109 115-235 6-119 (288)
392 3un1_A Probable oxidoreductase 92.6 0.4 1.4E-05 40.5 8.1 77 114-194 26-104 (260)
393 2j6i_A Formate dehydrogenase; 92.6 0.11 3.7E-06 47.2 4.7 38 113-150 161-198 (364)
394 2cuk_A Glycerate dehydrogenase 92.6 0.14 4.8E-06 45.4 5.3 36 113-149 141-176 (311)
395 1nff_A Putative oxidoreductase 92.6 0.56 1.9E-05 39.5 8.9 35 114-149 5-40 (260)
396 2jhf_A Alcohol dehydrogenase E 92.6 0.3 1E-05 43.4 7.6 34 115-148 191-224 (374)
397 1np3_A Ketol-acid reductoisome 92.6 0.1 3.5E-06 46.5 4.4 35 114-149 14-48 (338)
398 3ip3_A Oxidoreductase, putativ 92.6 0.076 2.6E-06 46.9 3.5 92 117-236 3-96 (337)
399 3u9l_A 3-oxoacyl-[acyl-carrier 92.6 0.38 1.3E-05 42.4 8.1 83 115-215 4-96 (324)
400 3zwc_A Peroxisomal bifunctiona 92.5 0.12 4.2E-06 51.3 5.3 35 115-150 315-349 (742)
401 1zh8_A Oxidoreductase; TM0312, 92.5 0.21 7.2E-06 44.1 6.4 89 116-236 18-111 (340)
402 2uvd_A 3-oxoacyl-(acyl-carrier 92.5 0.59 2E-05 38.8 8.9 32 115-147 3-35 (246)
403 4hv4_A UDP-N-acetylmuramate--L 92.5 0.34 1.1E-05 45.4 8.1 88 115-235 21-109 (494)
404 3e82_A Putative oxidoreductase 92.5 0.6 2E-05 41.6 9.4 33 116-148 7-41 (364)
405 3s2e_A Zinc-containing alcohol 92.5 0.13 4.6E-06 45.1 5.1 33 115-148 166-198 (340)
406 1y56_B Sarcosine oxidase; dehy 92.5 0.13 4.4E-06 45.2 4.9 35 117-152 6-40 (382)
407 3u3x_A Oxidoreductase; structu 92.5 0.36 1.2E-05 43.1 8.0 90 115-236 25-117 (361)
408 2gf2_A Hibadh, 3-hydroxyisobut 92.4 0.12 4E-06 44.3 4.5 32 118-150 2-33 (296)
409 3c96_A Flavin-containing monoo 92.4 0.13 4.5E-06 46.1 5.0 34 117-150 5-38 (410)
410 1dxy_A D-2-hydroxyisocaproate 92.4 0.14 4.8E-06 45.8 5.1 37 113-150 142-178 (333)
411 3dme_A Conserved exported prot 92.4 0.12 4.2E-06 44.5 4.7 32 117-149 5-36 (369)
412 2c20_A UDP-glucose 4-epimerase 92.4 0.61 2.1E-05 39.9 9.1 30 118-148 3-33 (330)
413 3gdo_A Uncharacterized oxidore 92.4 0.43 1.5E-05 42.4 8.3 86 116-236 5-94 (358)
414 3a28_C L-2.3-butanediol dehydr 92.4 0.76 2.6E-05 38.4 9.4 31 117-148 3-34 (258)
415 2gcg_A Glyoxylate reductase/hy 92.4 0.12 4.1E-06 46.0 4.6 36 113-149 152-187 (330)
416 3jv7_A ADH-A; dehydrogenase, n 92.4 0.37 1.3E-05 42.3 7.8 34 115-148 171-204 (345)
417 2x9g_A PTR1, pteridine reducta 92.4 0.85 2.9E-05 38.8 9.9 34 114-148 21-55 (288)
418 3d1c_A Flavin-containing putat 92.4 0.14 4.9E-06 44.5 5.0 34 117-150 5-38 (369)
419 1txg_A Glycerol-3-phosphate de 92.3 0.14 4.9E-06 44.5 5.0 30 118-148 2-31 (335)
420 1xdw_A NAD+-dependent (R)-2-hy 92.3 0.15 5.1E-06 45.6 5.1 37 113-150 143-179 (331)
421 1zej_A HBD-9, 3-hydroxyacyl-CO 92.3 0.14 4.7E-06 45.2 4.9 33 115-149 11-43 (293)
422 2tmg_A Protein (glutamate dehy 92.3 0.32 1.1E-05 45.2 7.5 37 113-149 206-243 (415)
423 1xhl_A Short-chain dehydrogena 92.3 0.61 2.1E-05 40.3 8.9 34 114-148 24-58 (297)
424 2pi1_A D-lactate dehydrogenase 92.3 0.17 5.7E-06 45.5 5.4 37 113-150 138-174 (334)
425 4dmm_A 3-oxoacyl-[acyl-carrier 92.3 0.66 2.3E-05 39.4 9.0 33 114-147 26-59 (269)
426 3moi_A Probable dehydrogenase; 92.3 0.21 7E-06 45.0 6.1 87 117-236 3-93 (387)
427 3cxt_A Dehydrogenase with diff 92.3 0.51 1.7E-05 40.7 8.4 34 114-148 32-66 (291)
428 1jay_A Coenzyme F420H2:NADP+ o 92.3 0.14 4.8E-06 41.6 4.5 31 118-149 2-33 (212)
429 3ado_A Lambda-crystallin; L-gu 92.3 0.14 4.9E-06 45.8 4.9 33 116-149 6-38 (319)
430 1spx_A Short-chain reductase f 92.2 0.29 9.9E-06 41.4 6.7 34 114-148 4-38 (278)
431 3lyl_A 3-oxoacyl-(acyl-carrier 92.2 0.32 1.1E-05 40.2 6.9 34 114-148 3-37 (247)
432 2oln_A NIKD protein; flavoprot 92.2 0.15 5E-06 45.2 5.0 34 117-151 5-38 (397)
433 3ego_A Probable 2-dehydropanto 92.2 0.14 4.7E-06 44.9 4.7 31 117-149 3-33 (307)
434 2uyy_A N-PAC protein; long-cha 92.2 0.13 4.6E-06 44.6 4.6 33 117-150 31-63 (316)
435 3k6j_A Protein F01G10.3, confi 92.2 0.18 6.1E-06 47.4 5.7 35 115-150 53-87 (460)
436 1xkq_A Short-chain reductase f 92.2 0.62 2.1E-05 39.5 8.8 34 114-148 4-38 (280)
437 1x1t_A D(-)-3-hydroxybutyrate 92.2 0.63 2.1E-05 39.0 8.7 33 115-148 3-36 (260)
438 3nix_A Flavoprotein/dehydrogen 92.2 0.11 3.8E-06 46.2 4.1 33 117-150 6-38 (421)
439 4h15_A Short chain alcohol deh 92.1 0.65 2.2E-05 39.9 8.9 76 113-193 8-85 (261)
440 1gdh_A D-glycerate dehydrogena 92.1 0.14 4.9E-06 45.4 4.8 35 113-148 143-177 (320)
441 1xgk_A Nitrogen metabolite rep 92.1 1.2 4E-05 39.4 10.8 92 117-235 6-109 (352)
442 3c8m_A Homoserine dehydrogenas 92.1 0.88 3E-05 40.5 10.0 23 116-138 6-28 (331)
443 7mdh_A Protein (malate dehydro 92.1 0.35 1.2E-05 44.3 7.4 79 116-215 32-117 (375)
444 1rjw_A ADH-HT, alcohol dehydro 92.1 0.13 4.4E-06 45.4 4.4 33 115-148 164-196 (339)
445 3kux_A Putative oxidoreductase 92.1 0.22 7.6E-06 44.1 6.0 33 117-149 8-42 (352)
446 1qp8_A Formate dehydrogenase; 92.1 0.18 6.1E-06 44.6 5.3 36 113-149 121-156 (303)
447 1vpd_A Tartronate semialdehyde 92.1 0.16 5.3E-06 43.6 4.8 32 118-150 7-38 (299)
448 2izz_A Pyrroline-5-carboxylate 92.1 0.14 4.6E-06 45.2 4.5 33 117-149 23-58 (322)
449 3p19_A BFPVVD8, putative blue 92.1 0.46 1.6E-05 40.4 7.8 81 114-195 14-96 (266)
450 3ba1_A HPPR, hydroxyphenylpyru 92.1 0.13 4.5E-06 46.1 4.4 37 113-150 161-197 (333)
451 2p2s_A Putative oxidoreductase 92.1 0.86 2.9E-05 39.8 9.7 34 116-149 4-38 (336)
452 3p2y_A Alanine dehydrogenase/p 92.0 0.18 6.3E-06 46.3 5.5 38 113-151 181-218 (381)
453 1nvm_B Acetaldehyde dehydrogen 92.0 0.19 6.6E-06 44.5 5.5 31 117-147 5-37 (312)
454 1z82_A Glycerol-3-phosphate de 92.0 0.16 5.6E-06 44.7 5.0 32 117-149 15-46 (335)
455 3gdg_A Probable NADP-dependent 92.0 0.52 1.8E-05 39.4 8.0 78 114-193 18-108 (267)
456 3vrd_B FCCB subunit, flavocyto 92.0 0.17 5.9E-06 45.0 5.2 35 116-150 2-37 (401)
457 3oig_A Enoyl-[acyl-carrier-pro 92.0 0.78 2.7E-05 38.4 9.1 35 114-149 5-42 (266)
458 3fhl_A Putative oxidoreductase 92.0 0.33 1.1E-05 43.2 7.0 34 116-149 5-40 (362)
459 1mx3_A CTBP1, C-terminal bindi 92.0 0.15 5.2E-06 46.0 4.8 36 113-149 165-200 (347)
460 3tpc_A Short chain alcohol deh 92.0 0.56 1.9E-05 39.2 8.1 79 114-193 5-88 (257)
461 2z5l_A Tylkr1, tylactone synth 92.0 0.68 2.3E-05 43.7 9.5 81 116-215 259-344 (511)
462 2yy7_A L-threonine dehydrogena 91.9 0.46 1.6E-05 40.3 7.6 31 117-148 3-36 (312)
463 1xea_A Oxidoreductase, GFO/IDH 91.9 0.5 1.7E-05 41.2 8.0 31 117-148 3-35 (323)
464 3l6d_A Putative oxidoreductase 91.9 0.17 5.8E-06 44.2 4.9 35 115-150 8-42 (306)
465 3gqv_A Enoyl reductase; medium 91.9 0.35 1.2E-05 43.2 7.1 31 115-145 164-195 (371)
466 3ctm_A Carbonyl reductase; alc 91.9 0.35 1.2E-05 40.8 6.8 34 114-148 32-66 (279)
467 2w2k_A D-mandelate dehydrogena 91.9 0.16 5.4E-06 45.7 4.8 37 113-150 160-197 (348)
468 2aqj_A Tryptophan halogenase, 91.8 0.19 6.5E-06 47.0 5.5 35 116-151 5-42 (538)
469 3gg9_A D-3-phosphoglycerate de 91.8 0.19 6.3E-06 45.5 5.2 36 113-149 157-192 (352)
470 2dtx_A Glucose 1-dehydrogenase 91.8 0.75 2.6E-05 38.8 8.8 75 114-194 6-82 (264)
471 3oa2_A WBPB; oxidoreductase, s 91.8 0.29 1E-05 43.0 6.3 34 117-150 4-38 (318)
472 4h3v_A Oxidoreductase domain p 91.7 0.062 2.1E-06 47.5 1.9 90 115-236 5-104 (390)
473 2rh8_A Anthocyanidin reductase 91.7 0.85 2.9E-05 39.2 9.2 30 117-147 10-40 (338)
474 3rih_A Short chain dehydrogena 91.7 0.32 1.1E-05 42.2 6.4 36 114-150 39-75 (293)
475 4g2n_A D-isomer specific 2-hyd 91.7 0.17 5.9E-06 45.7 4.8 37 113-150 170-206 (345)
476 3tzq_B Short-chain type dehydr 91.7 0.54 1.8E-05 39.9 7.7 78 114-193 9-92 (271)
477 1zk4_A R-specific alcohol dehy 91.7 0.66 2.3E-05 38.1 8.1 34 114-148 4-38 (251)
478 1n2s_A DTDP-4-, DTDP-glucose o 91.7 0.22 7.5E-06 42.1 5.2 30 118-149 2-32 (299)
479 3fbs_A Oxidoreductase; structu 91.6 0.2 6.8E-06 41.9 4.9 33 117-150 3-35 (297)
480 3grp_A 3-oxoacyl-(acyl carrier 91.6 0.31 1.1E-05 41.4 6.2 36 113-149 24-60 (266)
481 2xdo_A TETX2 protein; tetracyc 91.6 0.17 5.9E-06 45.1 4.8 34 116-150 26-59 (398)
482 1x0v_A GPD-C, GPDH-C, glycerol 91.6 0.12 4E-06 45.6 3.6 33 117-149 9-47 (354)
483 1x13_A NAD(P) transhydrogenase 91.6 0.18 6.3E-06 46.2 5.0 36 114-150 170-205 (401)
484 3c24_A Putative oxidoreductase 91.6 0.19 6.5E-06 43.1 4.9 32 117-149 12-44 (286)
485 3gms_A Putative NADPH:quinone 91.6 0.061 2.1E-06 47.4 1.7 33 115-148 144-177 (340)
486 4ew6_A D-galactose-1-dehydroge 91.6 0.46 1.6E-05 41.9 7.5 35 115-149 24-60 (330)
487 1qsg_A Enoyl-[acyl-carrier-pro 91.5 0.44 1.5E-05 40.1 7.0 35 114-149 7-44 (265)
488 3oet_A Erythronate-4-phosphate 91.5 0.2 6.9E-06 46.0 5.2 35 113-148 116-150 (381)
489 4e3z_A Putative oxidoreductase 91.5 0.93 3.2E-05 38.2 9.0 77 116-214 26-112 (272)
490 2c07_A 3-oxoacyl-(acyl-carrier 91.5 0.94 3.2E-05 38.5 9.1 33 114-147 42-75 (285)
491 2e4g_A Tryptophan halogenase; 91.5 0.21 7.3E-06 47.0 5.4 35 116-151 25-62 (550)
492 2vou_A 2,6-dihydroxypyridine h 91.5 0.21 7.2E-06 44.5 5.2 34 116-150 5-38 (397)
493 3is3_A 17BETA-hydroxysteroid d 91.5 0.65 2.2E-05 39.2 8.0 34 113-147 15-49 (270)
494 2d59_A Hypothetical protein PH 91.4 1.4 4.7E-05 34.3 9.3 33 116-149 22-58 (144)
495 1sny_A Sniffer CG10964-PA; alp 91.4 0.54 1.9E-05 39.2 7.4 36 114-149 19-57 (267)
496 3uxy_A Short-chain dehydrogena 91.4 0.8 2.7E-05 38.8 8.5 77 113-195 25-103 (266)
497 3m2t_A Probable dehydrogenase; 91.4 0.22 7.4E-06 44.5 5.1 35 116-150 5-41 (359)
498 4dry_A 3-oxoacyl-[acyl-carrier 91.4 0.14 5E-06 43.9 3.8 36 113-149 30-66 (281)
499 2o4c_A Erythronate-4-phosphate 91.4 0.21 7.3E-06 45.7 5.2 36 113-149 113-148 (380)
500 1c1d_A L-phenylalanine dehydro 91.4 0.23 7.8E-06 45.2 5.3 36 113-149 172-207 (355)
No 1
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=1.6e-33 Score=258.03 Aligned_cols=138 Identities=36% Similarity=0.522 Sum_probs=131.2
Q ss_pred cccchhhhhcccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHH
Q psy9587 98 TVTLTTLHTNWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKS 175 (236)
Q Consensus 98 ~~rydrq~~l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea 175 (236)
..+|+||+++||.++ +++.++|+||||||+|+++|++|+++|||+|+|+|+|.|+.+|| +|||++..+|||++||++
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL-~rq~~~~~~diG~~Ka~~ 94 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDP-GAQFLIRTGSVGRNRAEA 94 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCG-GGCTTSCSSCTTSBHHHH
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhC-CCCCccccccCcCCHHHH
Confidence 468999999999887 56778999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHhhCCCceEEEEecCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 176 SEARAQNLNPNVEVTSNETKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 176 ~~~~L~~inp~v~I~~~~~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++++|+++||+++|+++...+++...+++++||+||+|+|+..++..|+++|++++||+|.
T Consensus 95 ~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~ 155 (346)
T 1y8q_A 95 SLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFT 155 (346)
T ss_dssp HHHHHHHTCTTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhHCCCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999999887766788999999999999999999999999999999983
No 2
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.97 E-value=4.9e-32 Score=237.67 Aligned_cols=138 Identities=20% Similarity=0.191 Sum_probs=129.4
Q ss_pred cccchhhhhc--ccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHH
Q psy9587 98 TVTLTTLHTN--WAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRA 173 (236)
Q Consensus 98 ~~rydrq~~l--~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Ka 173 (236)
..||+||+++ ||.++ +++.++|+|+|+||+|++++++|+++|||+|+|+|+|.|+.+|| +||++++.+|||++|+
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL-~Rq~l~~~~diG~~Ka 84 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNL-QRQILFTTEDIDRPKS 84 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGT-TTCTTCCGGGTTSBHH
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccC-CCCccCChhhCCCHHH
Confidence 4689999999 99876 56778999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHhhCCCceEEEEecCCCcch-hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 174 KSSEARAQNLNPNVEVTSNETKVDEIS-EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 174 ea~~~~L~~inp~v~I~~~~~~l~~~~-~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++++++|+++||.++|+.+...+++.+ .++++++|+||+|+|+..++..|+++|++.++|+|.
T Consensus 85 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 85 QVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLIT 148 (251)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEE
Confidence 999999999999999999998887654 567889999999999999999999999999999973
No 3
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=99.97 E-value=3.2e-31 Score=238.08 Aligned_cols=136 Identities=15% Similarity=0.235 Sum_probs=102.3
Q ss_pred ccchhhh--hcccC-cc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHH
Q psy9587 99 VTLTTLH--TNWAG-SQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRA 173 (236)
Q Consensus 99 ~rydrq~--~l~g~-~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Ka 173 (236)
.-|+||+ +.||. ++ +++.++|+|||+||+||+++++|+++|||+|+|+|+|.|+.+|| +||| |+.+|+|++|+
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL-~Rq~-~~~~diG~~Ka 91 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANM-NRLF-FQPHQAGLSKV 91 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC--------------CCTTSBHH
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhc-cccc-CChhhcCchHH
Confidence 5699997 55886 55 56788999999999999999999999999999999999999999 9995 68899999999
Q ss_pred HHHHHHHHhhCCCceEEEEecCCCc-ch-hhhc-----------CCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 174 KSSEARAQNLNPNVEVTSNETKVDE-IS-EEFV-----------HGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 174 ea~~~~L~~inp~v~I~~~~~~l~~-~~-~~~l-----------~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++++++|+++||.++|+.+...+++ .+ .+++ ++||+||+|+||..+|..||++|+++++|+|+
T Consensus 92 ~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~ 167 (292)
T 3h8v_A 92 QAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWME 167 (292)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEE
Confidence 9999999999999999999999875 33 3343 68999999999999999999999999999973
No 4
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=99.97 E-value=3.7e-32 Score=261.51 Aligned_cols=137 Identities=25% Similarity=0.325 Sum_probs=129.0
Q ss_pred ccchhhhhcccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHH
Q psy9587 99 VTLTTLHTNWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSS 176 (236)
Q Consensus 99 ~rydrq~~l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~ 176 (236)
.||+||+++||.++ +++.++|+||||||+||++|++|+++|||+|+|+|+|.|+.+|| +|||+++.+|||++||+++
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL-~RQ~l~~~~dvG~~Ka~~a 91 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDA-GNNFFLQRSSIGKNRAEAA 91 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHH-HHCTTCCGGGBTSBHHHHH
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhc-ccCccCChhhcCcHHHHHH
Confidence 58999999999887 56778999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHhhCCCceEEEEecCCCc---chhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 177 EARAQNLNPNVEVTSNETKVDE---ISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 177 ~~~L~~inp~v~I~~~~~~l~~---~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
+++|+++||+++|+.+...+++ ...+++++||+||+|+|+..++..|+++|+.++||+|.
T Consensus 92 ~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~ 154 (531)
T 1tt5_A 92 MEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLI 154 (531)
T ss_dssp HHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999887764 24678999999999999999999999999999999983
No 5
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=5.7e-31 Score=230.51 Aligned_cols=138 Identities=15% Similarity=0.199 Sum_probs=129.0
Q ss_pred cccchhhhhc--ccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHH
Q psy9587 98 TVTLTTLHTN--WAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRA 173 (236)
Q Consensus 98 ~~rydrq~~l--~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Ka 173 (236)
..||+||+++ ||.++ +++.++|+|||+||+|++++++|+++|+++|+|+|.|.|+++|| +||+++..+|||++|+
T Consensus 9 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl-~Rq~l~~~~diG~~Ka 87 (249)
T 1jw9_B 9 MLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNL-QRQTLHSDATVGQPKV 87 (249)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGG-GTCTTCCGGGTTSBHH
T ss_pred HHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccC-CcccccChhhcCcHHH
Confidence 3689999999 99876 46778999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHhhCCCceEEEEecCCCcch-hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 174 KSSEARAQNLNPNVEVTSNETKVDEIS-EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 174 ea~~~~L~~inp~v~I~~~~~~l~~~~-~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++++++|.++||.++++.+...+++.+ .++++++|+||+|+|+.+++..++++|++.++|+|.
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~ 151 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVS 151 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEE
Confidence 999999999999999999988887654 567899999999999999999999999999999973
No 6
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=4.2e-30 Score=235.84 Aligned_cols=140 Identities=14% Similarity=0.233 Sum_probs=127.9
Q ss_pred cccccchhhhh---cccCcc-----ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCc
Q psy9587 96 AHTVTLTTLHT---NWAGSQ-----SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHED 167 (236)
Q Consensus 96 ~~~~rydrq~~---l~g~~~-----~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~d 167 (236)
....||+||+. +|+..+ +++.++|+|||+||+|++++++|+++|||+|+|+|+|.|+.+|| +||++++.+|
T Consensus 90 ~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL-~Rq~l~~~~d 168 (353)
T 3h5n_A 90 TENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNL-TRQVLFSEDD 168 (353)
T ss_dssp CTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGG-GTCTTCCGGG
T ss_pred HHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCccccc-ccccCCChHH
Confidence 35689999975 677532 56788999999999999999999999999999999999999999 9999999999
Q ss_pred CCChHHHHHHHHHHhhCCCceEEEEecCCCcch-hhhcCCCcEEEEcCCCHH-HHHHHHHHHHHcCCcEEC
Q psy9587 168 IGKNRAKSSEARAQNLNPNVEVTSNETKVDEIS-EEFVHGFDVVIATSCNPN-QLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 168 IGk~Kaea~~~~L~~inp~v~I~~~~~~l~~~~-~~~l~~~DlVI~~~d~~~-~r~~In~~c~~~~ip~I~ 236 (236)
+|++|+++++++|+++||.++|+.+...+++.+ .+.+++||+||+|+|+.. ++..|+++|+++++|+|.
T Consensus 169 iG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~ 239 (353)
T 3h5n_A 169 VGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYIN 239 (353)
T ss_dssp TTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEE
T ss_pred CCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhCCCEEE
Confidence 999999999999999999999999999987755 333899999999999999 999999999999999983
No 7
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.96 E-value=9.8e-30 Score=248.54 Aligned_cols=132 Identities=16% Similarity=0.259 Sum_probs=122.3
Q ss_pred hhhcccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHH
Q psy9587 104 LHTNWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQ 181 (236)
Q Consensus 104 q~~l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~ 181 (236)
|+++||.++ +++.++|+||||||+||+++++|+++|||+|+|+|+|.|+.+|| +|||+|+.+|||++||++++++|+
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNL-nRQflf~~~dVGk~KAeaaa~~L~ 81 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNL-NRQFLFQKKHVGRSKAQVAKESVL 81 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGG-GTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhc-CCCcCCChhHcChHHHHHHHHHHH
Confidence 889999887 46778999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hhCCCceEEEEecCCCcch--hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 182 NLNPNVEVTSNETKVDEIS--EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 182 ~inp~v~I~~~~~~l~~~~--~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++||.++|+++...+++.+ .+++++||+||+|+|+..+|..|+++|+.+++|+|.
T Consensus 82 ~iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~ 138 (640)
T 1y8q_B 82 QFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIE 138 (640)
T ss_dssp TTCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999887543 578999999999999999999999999999999983
No 8
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.6e-30 Score=261.21 Aligned_cols=138 Identities=20% Similarity=0.234 Sum_probs=130.1
Q ss_pred cccchhhhhcccCcc--ccccceEEEEcCChhHHHHHHHHHHhCC-----ceEEEeeCCcccccCCCCCccccCCCcCCC
Q psy9587 98 TVTLTTLHTNWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGV-----KSVCLLDSGVVTKEDVNTAQFLAPHEDIGK 170 (236)
Q Consensus 98 ~~rydrq~~l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GV-----g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk 170 (236)
..||+||+++||.++ +++.++|+||||||+||+++++|+++|| |+|+|+|.|.|+.+|| +|||+|+.+|||+
T Consensus 405 ~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNL-nRQ~lf~~~dvG~ 483 (1015)
T 3cmm_A 405 NSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNL-NRQFLFRPKDVGK 483 (1015)
T ss_dssp SSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGT-TTCTTCCGGGTTS
T ss_pred hhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccc-cccccCChhhCCC
Confidence 469999999999887 5677999999999999999999999999 9999999999999999 9999999999999
Q ss_pred hHHHHHHHHHHhhCCCc--eEEEEecCCCcch-----hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 171 NRAKSSEARAQNLNPNV--EVTSNETKVDEIS-----EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 171 ~Kaea~~~~L~~inp~v--~I~~~~~~l~~~~-----~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
+||++++++++++||.+ +|+++...+++.+ .++++++|+||+|+||..+|.+++++|+.+++|+|.
T Consensus 484 ~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~ 556 (1015)
T 3cmm_A 484 NKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLE 556 (1015)
T ss_dssp BHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEE
Confidence 99999999999999999 9999999987644 467889999999999999999999999999999983
No 9
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=99.96 E-value=2.9e-29 Score=236.14 Aligned_cols=121 Identities=19% Similarity=0.259 Sum_probs=115.8
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
+.++|+||||||+||+++++|+++|||+|+|+|+|.|+.+|| +|||+++.+|||++||++++++|+++||.++|+.+..
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL-~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~ 117 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNL-NRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN 117 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGT-TTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEES
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhcc-CCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEec
Confidence 678999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHc------------CCcEEC
Q psy9587 195 KVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSK------------SKISLF 236 (236)
Q Consensus 195 ~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~------------~ip~I~ 236 (236)
.+++.+.+++++||+||+|+|+.++|.+||+.|+.. ++|+|.
T Consensus 118 ~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~ 171 (434)
T 1tt5_B 118 KIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID 171 (434)
T ss_dssp CGGGBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEE
T ss_pred ccchhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEE
Confidence 888777789999999999999999999999999984 999973
No 10
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-29 Score=258.00 Aligned_cols=136 Identities=27% Similarity=0.371 Sum_probs=128.4
Q ss_pred ccccchhhhhcccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHH
Q psy9587 97 HTVTLTTLHTNWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAK 174 (236)
Q Consensus 97 ~~~rydrq~~l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kae 174 (236)
+..+|+||+++||.++ +++.++|+||||||+|+++|++|+++|||+|+|+|+|.|+.+|| +|||+++.+|||++||+
T Consensus 6 d~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL-~RQ~l~~~~dvG~~Ka~ 84 (1015)
T 3cmm_A 6 DESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADL-STQFFLTEKDIGQKRGD 84 (1015)
T ss_dssp CHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGG-GTCTTCCGGGTTSBHHH
T ss_pred hhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhh-ccccccChhhcChHHHH
Confidence 3468999999999987 56778999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHhhCCCceEEEEecCCCcchhhhcCCCcEEEEcCC-CHHHHHHHHHHHHHcCCcEEC
Q psy9587 175 SSEARAQNLNPNVEVTSNETKVDEISEEFVHGFDVVIATSC-NPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 175 a~~~~L~~inp~v~I~~~~~~l~~~~~~~l~~~DlVI~~~d-~~~~r~~In~~c~~~~ip~I~ 236 (236)
+++++|+++||+++|+++...+++ +++++||+||+|.| +..++..|+++|++++||+|+
T Consensus 85 a~~~~L~~lNP~v~v~~~~~~l~~---~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~ 144 (1015)
T 3cmm_A 85 VTRAKLAELNAYVPVNVLDSLDDV---TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFIS 144 (1015)
T ss_dssp HHHHHHTTSCTTSCEEECCCCCCS---TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHCCCCeEEEecCCCCH---HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 999999999999999999888754 58899999999999 999999999999999999984
No 11
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.96 E-value=5.7e-29 Score=227.49 Aligned_cols=129 Identities=16% Similarity=0.175 Sum_probs=118.0
Q ss_pred hcccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhh
Q psy9587 106 TNWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNL 183 (236)
Q Consensus 106 ~l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i 183 (236)
|+|+..+ +++.++|+|||+||+||+++++|+++|||+|+|+|+|.|+.+|| +||++++.+|+|++|+++++++|+++
T Consensus 22 Rll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL-~RQ~l~~~~diG~~Ka~aaa~~L~~i 100 (340)
T 3rui_A 22 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP-VRQALYNFEDCGKPKAELAAASLKRI 100 (340)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTST-TTSTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred hhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccc-cccccCChhhcChHHHHHHHHHHHHh
Confidence 6666654 56889999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCCceEEEEecCC---------------Ccch-hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 184 NPNVEVTSNETKV---------------DEIS-EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 184 np~v~I~~~~~~l---------------~~~~-~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
||.++++.+...+ +..+ .+++++||+||+|+|+.++|..++++|+.+++|+|
T Consensus 101 nP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI 168 (340)
T 3rui_A 101 FPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVI 168 (340)
T ss_dssp CTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEE
Confidence 9999999988654 1112 56789999999999999999999999999999997
No 12
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.95 E-value=2.1e-28 Score=237.18 Aligned_cols=136 Identities=15% Similarity=0.153 Sum_probs=122.3
Q ss_pred ccchhhhhc-------ccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCC
Q psy9587 99 VTLTTLHTN-------WAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIG 169 (236)
Q Consensus 99 ~rydrq~~l-------~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIG 169 (236)
.+|+||+++ |+..+ +++.++|+||||||+||++|++|+++|||+|+|+|+|.|+.+|| +||++++.+|||
T Consensus 301 a~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL-~RQ~L~~~~DvG 379 (598)
T 3vh1_A 301 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP-VRQALYNFEDCG 379 (598)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTST-TTSTTCCSTTCS
T ss_pred HHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccccccc-ccccccchhhcC
Confidence 467777775 44443 57789999999999999999999999999999999999999999 999999999999
Q ss_pred ChHHHHHHHHHHhhCCCceEEEEecCC---------------Ccch-hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCc
Q psy9587 170 KNRAKSSEARAQNLNPNVEVTSNETKV---------------DEIS-EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 170 k~Kaea~~~~L~~inp~v~I~~~~~~l---------------~~~~-~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip 233 (236)
++||++++++|+++||.++|+.+...+ +..+ .++++++|+||+|+|+.++|..++++|+.+++|
T Consensus 380 ~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~~~p 459 (598)
T 3vh1_A 380 KPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKT 459 (598)
T ss_dssp SBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999998764 1122 567889999999999999999999999999999
Q ss_pred EE
Q psy9587 234 SL 235 (236)
Q Consensus 234 ~I 235 (236)
+|
T Consensus 460 lI 461 (598)
T 3vh1_A 460 VI 461 (598)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 13
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.95 E-value=7.2e-28 Score=233.78 Aligned_cols=129 Identities=16% Similarity=0.175 Sum_probs=118.8
Q ss_pred hcccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhh
Q psy9587 106 TNWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNL 183 (236)
Q Consensus 106 ~l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i 183 (236)
|+|+..+ +++.++|+||||||+||++|++|+++|||+|+|+|+|.|+.+|| +||++++.+|+|++||++++++|+++
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL-~RQ~L~~~~dIG~~KAeaaa~~L~~i 392 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP-VRQALYNFEDCGKPKAELAAASLKRI 392 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGG-GTSTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCc-ccccCCChhhcChHHHHHHHHHHHhh
Confidence 6777766 67889999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCCceEEEEecCC---------------Ccch-hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 184 NPNVEVTSNETKV---------------DEIS-EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 184 np~v~I~~~~~~l---------------~~~~-~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
||.++|+.+...+ +..+ .++++++|+||+|+|+.++|..++++|+.+++|+|
T Consensus 393 NP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI 460 (615)
T 4gsl_A 393 FPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVI 460 (615)
T ss_dssp CTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEE
Confidence 9999999998654 1122 56789999999999999999999999999999997
No 14
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.94 E-value=2.3e-27 Score=236.66 Aligned_cols=120 Identities=19% Similarity=0.274 Sum_probs=115.9
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
+.++|+||||||+||+++++|+++|||+|+|+|+|.|+.+|| +|||+++.+|||++||++++++|+++||.++|+.+..
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl-~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~~~ 488 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNL-NRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN 488 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGG-GTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEEES
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeeccccc-ccccccchhhcCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 678999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHc------------CCcEE
Q psy9587 195 KVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSK------------SKISL 235 (236)
Q Consensus 195 ~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~------------~ip~I 235 (236)
.+++.+.+++++||+||+|+|+..+|.+||+.|+.. +||+|
T Consensus 489 ~~~~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i 541 (805)
T 2nvu_B 489 KIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLI 541 (805)
T ss_dssp CGGGSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEE
T ss_pred cccccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEE
Confidence 998877789999999999999999999999999984 99997
No 15
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.05 E-value=4.4e-05 Score=56.49 Aligned_cols=90 Identities=16% Similarity=0.133 Sum_probs=61.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|+|+|++|..+++.|...|..+++++|.+.- |.+.+. .+.+. .....+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~--------------------~~~~~~------~~~~~--~~~~d~ 57 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA--------------------ALAVLN------RMGVA--TKQVDA 57 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH--------------------HHHHHH------TTTCE--EEECCT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH--------------------HHHHHH------hCCCc--EEEecC
Confidence 57899999999999999999999777888884321 122111 22333 333344
Q ss_pred Ccch--hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 197 DEIS--EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 197 ~~~~--~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
.+.. .+.++++|+||.|+.. .....+.+.|.+.+++++
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPF-FLTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHcCCCEEEECCCc-hhhHHHHHHHHHhCCCEE
Confidence 3321 4567899999999853 445677888888888875
No 16
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.99 E-value=1.2e-05 Score=69.15 Aligned_cols=93 Identities=9% Similarity=0.076 Sum_probs=68.5
Q ss_pred cccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 112 QSYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 112 ~~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.+++..+|+|||+|.+|...++.|..+|. ++++++++.-+ .+ . .+.+. . .++.
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~--~l--------------------~-~l~~~-~--~i~~ 79 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA--EI--------------------N-EWEAK-G--QLRV 79 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH--HH--------------------H-HHHHT-T--SCEE
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH--HH--------------------H-HHHHc-C--CcEE
Confidence 35678899999999999999999999997 59999864211 01 1 11111 2 2334
Q ss_pred EecCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 192 NETKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 192 ~~~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
....+. .+.+.++|+||.|+++......+.+.|+ .+||+-
T Consensus 80 i~~~~~---~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 80 KRKKVG---EEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp ECSCCC---GGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred EECCCC---HhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 444443 3567899999999999999999999998 999873
No 17
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.93 E-value=2.6e-05 Score=69.06 Aligned_cols=60 Identities=18% Similarity=0.152 Sum_probs=47.1
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
.++.++|+|+|+||+|..++..|+..|+++|++++.+. .|++.+++.+....+.+++...
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~--------------------~~a~~la~~~~~~~~~~~i~~~ 183 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT--------------------SRAQALADVINNAVGREAVVGV 183 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH--------------------HHHHHHHHHHHHHHTSCCEEEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH--------------------HHHHHHHHHHHhhcCCceEEEc
Confidence 35678999999999999999999999999999986431 3677777777776666555543
No 18
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.81 E-value=0.00021 Score=56.52 Aligned_cols=92 Identities=20% Similarity=0.071 Sum_probs=59.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
...+|+|+|+|.+|..+++.|...|. +++++|.+.-....+ .... ... ....
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~-~~~~------------------------g~~--~~~~ 69 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRL-NSEF------------------------SGF--TVVG 69 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGS-CTTC------------------------CSE--EEES
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHH-HhcC------------------------CCc--EEEe
Confidence 44679999999999999999999997 699998764333333 1010 011 1111
Q ss_pred CCCcc-h--hhhcCCCcEEEEcCCCHHHHHHHHHHHHH-cCCcE
Q psy9587 195 KVDEI-S--EEFVHGFDVVIATSCNPNQLIKIDDFCRS-KSKIS 234 (236)
Q Consensus 195 ~l~~~-~--~~~l~~~DlVI~~~d~~~~r~~In~~c~~-~~ip~ 234 (236)
..... . ...+.++|+||.|+.+......+...++. .+...
T Consensus 70 d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~ 113 (155)
T 2g1u_A 70 DAAEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVEN 113 (155)
T ss_dssp CTTSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSE
T ss_pred cCCCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCe
Confidence 11110 0 11246789999999988888888888887 55443
No 19
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.71 E-value=9.8e-05 Score=65.30 Aligned_cols=110 Identities=12% Similarity=0.225 Sum_probs=68.6
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccc--cCCCCCccccCCCcCCChHHHHHHHHHHhh-CC----
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTK--EDVNTAQFLAPHEDIGKNRAKSSEARAQNL-NP---- 185 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~--sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i-np---- 185 (236)
+++..+|+|||+|.+|...++.|...|.. ++++|++.-+. ..+ .. +.. +-+. ++. ....+++ ++
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~-VtViap~~~~~l~~~~--~~-l~~--~~~~-~~~--~~~~~~~~~~~~~~ 80 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCK-LTLVSPDLHKSIIPKF--GK-FIQ--NKDQ-PDY--REDAKRFINPNWDP 80 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCE-EEEEEEEECTTHHHHH--CG-GGC----------------CEEECTTCCT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCE-EEEEcCCCCcchhHHH--HH-HHh--cccc-ccc--cchhhccccccccc
Confidence 45778999999999999999999999965 99999765311 011 11 110 0000 000 0000000 00
Q ss_pred -CceE-EEEecCCCcchhhhcC------CCcEEEEcCCCHHHHHHHHHHHHHc---CCcE
Q psy9587 186 -NVEV-TSNETKVDEISEEFVH------GFDVVIATSCNPNQLIKIDDFCRSK---SKIS 234 (236)
Q Consensus 186 -~v~I-~~~~~~l~~~~~~~l~------~~DlVI~~~d~~~~r~~In~~c~~~---~ip~ 234 (236)
.-.+ +.+...+.+ +.+. ++|+||.|+++......|.+.|++. ++|+
T Consensus 81 ~~g~i~~~i~~~~~~---~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~V 137 (274)
T 1kyq_A 81 TKNEIYEYIRSDFKD---EYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLV 137 (274)
T ss_dssp TSCCCSEEECSSCCG---GGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEE
T ss_pred ccCCeeEEEcCCCCH---HHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEE
Confidence 1123 444444432 3344 8999999999999999999999999 9887
No 20
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.69 E-value=0.00015 Score=55.34 Aligned_cols=91 Identities=14% Similarity=0.068 Sum_probs=56.6
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
+..+|+|+|+|.+|..+++.|...|. +++++|.+.-....+ ... ... ....
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~-~~~-------------------------~~~--~~~~ 55 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAY-ASY-------------------------ATH--AVIA 55 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTT-TTT-------------------------CSE--EEEC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-HHh-------------------------CCE--EEEe
Confidence 34568999999999999999999997 588888653222222 110 111 1112
Q ss_pred CCCcc-h-hh-hcCCCcEEEEcCCCH-HHHHHHHHHHHHcCCcE
Q psy9587 195 KVDEI-S-EE-FVHGFDVVIATSCNP-NQLIKIDDFCRSKSKIS 234 (236)
Q Consensus 195 ~l~~~-~-~~-~l~~~DlVI~~~d~~-~~r~~In~~c~~~~ip~ 234 (236)
+..+. . .+ .+.++|+||.|+.+. .....+...|+..+.+.
T Consensus 56 d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ 99 (144)
T 2hmt_A 56 NATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPN 99 (144)
T ss_dssp CTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCCe
Confidence 22211 1 11 246789999988764 66667777888777653
No 21
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.60 E-value=0.00024 Score=63.88 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=33.3
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|+|+||+|..++..|+..|+.+|+|++.+
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3567899999999999999999999999999998754
No 22
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=97.60 E-value=0.0004 Score=65.11 Aligned_cols=92 Identities=12% Similarity=0.041 Sum_probs=68.0
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
+++..+|+|||.|.+|...++.|...|. +++++|++.-. .+.++...-.++.+
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~--------------------------~~~~l~~~~~i~~~ 61 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP--------------------------QFTVWANEGMLTLV 61 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH--------------------------HHHHHHTTTSCEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH--------------------------HHHHHHhcCCEEEE
Confidence 4567889999999999999999999996 59999964211 01111111134444
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcE
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKIS 234 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~ 234 (236)
...+. .+.+.++|+||.|+++......+.+.|++++||+
T Consensus 62 ~~~~~---~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 62 EGPFD---ETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp ESSCC---GGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred ECCCC---ccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 44443 3456789999999999988899999999999997
No 23
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.55 E-value=0.00016 Score=55.91 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=60.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|+|+|.+|..+++.|...|. +++++|.|.- +++ .+.+. .+ .....+.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~--------------------~~~----~~~~~--~~--~~~~gd~ 57 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKE--------------------KIE----LLEDE--GF--DAVIADP 57 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHH--------------------HHH----HHHHT--TC--EEEECCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHH--------------------HHH----HHHHC--CC--cEEECCC
Confidence 478999999999999999999998 4888885321 122 22221 22 2333444
Q ss_pred Ccch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcE
Q psy9587 197 DEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKIS 234 (236)
Q Consensus 197 ~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~ 234 (236)
++.. ...+.++|+||.++++......+...+++.+.+.
T Consensus 58 ~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~ 98 (141)
T 3llv_A 58 TDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVY 98 (141)
T ss_dssp TCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCce
Confidence 3321 1125689999999999888888888888876543
No 24
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.47 E-value=0.00048 Score=63.42 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=65.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC--ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV--KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV--g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.+|+|+|+|++|..+++.|+..|- ..++++|.+. .|++.+++.+....+ .++.....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~--------------------~~~~~la~~l~~~~~-~~~~~~~~ 60 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTL--------------------SKCQEIAQSIKAKGY-GEIDITTV 60 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCH--------------------HHHHHHHHHHHHTTC-CCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCH--------------------HHHHHHHHHhhhhcC-CceEEEEe
Confidence 368999999999999999999883 5788877322 356666666655432 23444444
Q ss_pred CCCcc-h-hhhcCC--CcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 195 KVDEI-S-EEFVHG--FDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 195 ~l~~~-~-~~~l~~--~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
++++. . .+.+++ +|+||.|+.... ...+.+.|.+.++.++
T Consensus 61 D~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 61 DADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYL 104 (405)
T ss_dssp CTTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEE
T ss_pred cCCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEE
Confidence 44432 1 345555 899998887543 3567778888888876
No 25
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.44 E-value=0.0011 Score=52.13 Aligned_cols=89 Identities=12% Similarity=0.031 Sum_probs=60.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|+|+|.+|..+++.|...|.. ++++|.+.-+ +++.+.+. ....+ ..+..+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~-V~vid~~~~~-------------------~~~~~~~~---~~~~~--~~i~gd~ 58 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQN-VTVISNLPED-------------------DIKQLEQR---LGDNA--DVIPGDS 58 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHH-------------------HHHHHHHH---HCTTC--EEEESCT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCC-EEEEECCChH-------------------HHHHHHHh---hcCCC--eEEEcCC
Confidence 5689999999999999999999964 8888864210 11111111 11223 3344444
Q ss_pred Ccch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHc
Q psy9587 197 DEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSK 230 (236)
Q Consensus 197 ~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~ 230 (236)
++.. ...+.++|+||.|+++......+...|++.
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 59 NDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp TSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 3322 223788999999999988888888888876
No 26
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.41 E-value=0.00062 Score=59.84 Aligned_cols=57 Identities=21% Similarity=0.104 Sum_probs=46.9
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEE
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~ 190 (236)
.+.++++|+|+||.+..++..|+..|+.+|+|++ |. ..|++.+++.+....+...+.
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~n-----------Rt---------~~ra~~la~~~~~~~~~~~~~ 179 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCD-----------PS---------TARMGAVCELLGNGFPGLTVS 179 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC-----------SC---------HHHHHHHHHHHHHHCTTCEEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeC-----------CC---------HHHHHHHHHHHhccCCcceeh
Confidence 4667899999999999999999999999999975 32 237888888888887765543
No 27
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.40 E-value=0.00064 Score=61.37 Aligned_cols=88 Identities=11% Similarity=-0.005 Sum_probs=57.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.-+|+|+|+|.+|..+++.|+.. ..++++|-+. .+ +.+..+.+. ...-+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~~--------------------~~-------~~~~~~~~~--~~~~d 64 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN--------------------EN-------LEKVKEFAT--PLKVD 64 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH--------------------HH-------HHHHTTTSE--EEECC
T ss_pred ccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcCH--------------------HH-------HHHHhccCC--cEEEe
Confidence 34689999999999999999753 4577666321 11 222223322 22223
Q ss_pred CCcch--hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 196 VDEIS--EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
..+.. .++++++|+||.|+.+. .-..+.+.|.+.|+.++
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yv 105 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMV 105 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEE
T ss_pred cCCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceE
Confidence 33222 55789999999998765 34578899999998875
No 28
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.36 E-value=0.00059 Score=61.24 Aligned_cols=37 Identities=11% Similarity=0.113 Sum_probs=33.2
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|+|+||+|..++..|+..|+.+|+|++.+
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3566889999999999999999999999999998754
No 29
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.32 E-value=0.001 Score=50.37 Aligned_cols=88 Identities=17% Similarity=0.146 Sum_probs=56.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|+|+|.+|..+++.|...|. +++++|.+.- +++ .+.+.. .+. ......
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~--------------------~~~----~~~~~~-~~~--~~~~d~ 56 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKD--------------------ICK----KASAEI-DAL--VINGDC 56 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHH--------------------HHH----HHHHHC-SSE--EEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH--------------------HHH----HHHHhc-CcE--EEEcCC
Confidence 468999999999999999999995 5888885321 111 122111 122 222222
Q ss_pred Ccch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCC
Q psy9587 197 DEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSK 232 (236)
Q Consensus 197 ~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~i 232 (236)
.... ...+.++|+||.|+.+......+.+.++..+.
T Consensus 57 ~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 57 TKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGI 95 (140)
T ss_dssp TSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcCC
Confidence 2211 12356899999999887777777777877664
No 30
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.16 E-value=0.00088 Score=54.02 Aligned_cols=88 Identities=7% Similarity=-0.034 Sum_probs=56.7
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
...+|+|+|+|.+|..+++.|... |. .++++|.|.- |++ .+.+. .+. ...
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~--------------------~~~----~~~~~--g~~--~~~ 88 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREE--------------------AAQ----QHRSE--GRN--VIS 88 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHH--------------------HHH----HHHHT--TCC--EEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHH--------------------HHH----HHHHC--CCC--EEE
Confidence 345789999999999999999998 87 4888885431 111 12222 222 222
Q ss_pred cCCCcch--hhh--cCCCcEEEEcCCCHHHHHHHHHHHHHcC
Q psy9587 194 TKVDEIS--EEF--VHGFDVVIATSCNPNQLIKIDDFCRSKS 231 (236)
Q Consensus 194 ~~l~~~~--~~~--l~~~DlVI~~~d~~~~r~~In~~c~~~~ 231 (236)
.+.++.. .+. +.++|+||.|+.+......+-..++..+
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 2222211 222 5689999999988777767767777765
No 31
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.16 E-value=0.001 Score=51.79 Aligned_cols=85 Identities=14% Similarity=0.106 Sum_probs=56.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|+|+|.+|..+++.|...|. .++++|.|.- ++ +.+++ ..+. ....+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~--------------------~~----~~~~~--~g~~--~i~gd~ 58 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRT--------------------RV----DELRE--RGVR--AVLGNA 58 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHH--------------------HH----HHHHH--TTCE--EEESCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHH--------------------HH----HHHHH--cCCC--EEECCC
Confidence 468999999999999999999998 4888885431 11 12222 1222 333433
Q ss_pred Ccch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHc
Q psy9587 197 DEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSK 230 (236)
Q Consensus 197 ~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~ 230 (236)
+... ..-+.++|+||.|+++......+...+++.
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 3221 123568999999998877666666666664
No 32
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.15 E-value=0.0023 Score=58.29 Aligned_cols=89 Identities=11% Similarity=-0.026 Sum_probs=55.2
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
+.++|+|+|+|++|..+++.|+.. ..+++.|.+. .|++.+++ ... ....
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~--------------------~~a~~la~-------~~~--~~~~ 63 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN--------------------ENLEKVKE-------FAT--PLKV 63 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH--------------------HHHHHHTT-------TSE--EEEC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH--------------------HHHHHHHh-------hCC--eEEE
Confidence 457899999999999999999987 5688877432 12222221 111 1111
Q ss_pred CCCc-ch-hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 195 KVDE-IS-EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 195 ~l~~-~~-~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
++.+ .. .+.++++|+||.|+... ....+.+.|.+.|+.++
T Consensus 64 d~~~~~~l~~ll~~~DvVIn~~P~~-~~~~v~~a~l~~G~~~v 105 (365)
T 2z2v_A 64 DASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMV 105 (365)
T ss_dssp CTTCHHHHHHHHTTCSCEEECCCHH-HHHHHHHHHHHTTCCEE
T ss_pred ecCCHHHHHHHHhCCCEEEECCChh-hhHHHHHHHHHhCCeEE
Confidence 2221 12 45677888888886433 23446777888887765
No 33
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.07 E-value=0.0023 Score=53.10 Aligned_cols=88 Identities=9% Similarity=-0.052 Sum_probs=59.9
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKVD 197 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l~ 197 (236)
+|+|+|+|.+|..+++.|...|.. ++++|.|.- +++ .+.+.. .+ ..+..+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~-v~vid~~~~--------------------~~~----~l~~~~-~~--~~i~gd~~ 53 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYG-VVIINKDRE--------------------LCE----EFAKKL-KA--TIIHGDGS 53 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCC-EEEEESCHH--------------------HHH----HHHHHS-SS--EEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCe-EEEEECCHH--------------------HHH----HHHHHc-CC--eEEEcCCC
Confidence 478999999999999999999974 888884321 111 222211 22 33444443
Q ss_pred cch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHH-cCCc
Q psy9587 198 EIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRS-KSKI 233 (236)
Q Consensus 198 ~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~-~~ip 233 (236)
... ...+.++|+||.++++......+...+++ ++.+
T Consensus 54 ~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~ 93 (218)
T 3l4b_C 54 HKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVK 93 (218)
T ss_dssp SHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCC
T ss_pred CHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCC
Confidence 321 23468899999999999888888888886 4544
No 34
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.97 E-value=0.0034 Score=59.53 Aligned_cols=90 Identities=13% Similarity=0.145 Sum_probs=60.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhC-C--ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSG-V--KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~G-V--g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
.+|+|||+|+||+.++..|++.+ + ..|+++|.+... .++ .+.+ .+++ ..
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-~~~--------------------~~~~-----g~~~--~~ 65 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-VDV--------------------AQQY-----GVSF--KL 65 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-CCH--------------------HHHH-----TCEE--EE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhh-hhH--------------------Hhhc-----CCce--eE
Confidence 46899999999999999999864 5 589999865432 111 1111 2333 33
Q ss_pred cCCCcch-----hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEIS-----EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~-----~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
..++..+ ..++++.|+||.+.... ....|.+.|.+.|+-+|
T Consensus 66 ~~Vdadnv~~~l~aLl~~~DvVIN~s~~~-~~l~Im~acleaGv~Yl 111 (480)
T 2ph5_A 66 QQITPQNYLEVIGSTLEENDFLIDVSIGI-SSLALIILCNQKGALYI 111 (480)
T ss_dssp CCCCTTTHHHHTGGGCCTTCEEEECCSSS-CHHHHHHHHHHHTCEEE
T ss_pred EeccchhHHHHHHHHhcCCCEEEECCccc-cCHHHHHHHHHcCCCEE
Confidence 3444332 24666679999877554 44678899999998775
No 35
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.95 E-value=0.0021 Score=56.44 Aligned_cols=37 Identities=3% Similarity=-0.114 Sum_probs=33.0
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++++|+|+||+|..++..|+..|+.+|++++.+
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4567899999999999999999999999999998743
No 36
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.92 E-value=0.002 Score=58.11 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=54.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCc-eEEEE
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNV-EVTSN 192 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v-~I~~~ 192 (236)
+..+|.|+|+|.+|+.++..|+..|+ ++|+|+|-+ ..|++..+..|....|.. .+...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~--------------------~~k~~g~a~DL~~~~~~~~~~~i~ 67 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF--------------------KDKTKGDAIDLEDALPFTSPKKIY 67 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC--------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC--------------------hHHHHHHHhhHhhhhhhcCCcEEE
Confidence 44678999999999999999999998 589998832 235666666677655421 22222
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
.. +.+-++++|+||.+...
T Consensus 68 ~~-----~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 68 SA-----EYSDAKDADLVVITAGA 86 (326)
T ss_dssp EC-----CGGGGTTCSEEEECCCC
T ss_pred EC-----cHHHhcCCCEEEECCCC
Confidence 22 23457899999988653
No 37
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.92 E-value=0.0035 Score=52.06 Aligned_cols=91 Identities=8% Similarity=-0.035 Sum_probs=57.8
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceE-EE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEV-TS 191 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I-~~ 191 (236)
++..+|+|.|+ |++|.++++.|+..|. ++++++.+.- +.+. +... .+ +.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~--------------------~~~~----~~~~----~~~~~ 69 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEE--------------------QGPE----LRER----GASDI 69 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGG--------------------GHHH----HHHT----TCSEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChH--------------------HHHH----HHhC----CCceE
Confidence 46678999997 8999999999999997 5777764321 1111 1111 23 44
Q ss_pred EecCCCcchhhhcCCCcEEEEcCC-------------CHHHHHHHHHHHHHcCCc
Q psy9587 192 NETKVDEISEEFVHGFDVVIATSC-------------NPNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 192 ~~~~l~~~~~~~l~~~DlVI~~~d-------------~~~~r~~In~~c~~~~ip 233 (236)
+..++++.-.+.+.++|+||.+.. |...-..+.+.|++.+.+
T Consensus 70 ~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 124 (236)
T 3e8x_A 70 VVANLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIK 124 (236)
T ss_dssp EECCTTSCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCC
T ss_pred EEcccHHHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCC
Confidence 555555323566789999998864 333445667777777653
No 38
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.91 E-value=0.0026 Score=56.02 Aligned_cols=37 Identities=8% Similarity=-0.095 Sum_probs=32.8
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|+|+||+|..++..|+..|+.+|++++.+
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 3567889999999999999999999999999998743
No 39
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.91 E-value=0.0039 Score=56.10 Aligned_cols=75 Identities=19% Similarity=0.174 Sum_probs=51.9
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCC----CceEE
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNP----NVEVT 190 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp----~v~I~ 190 (236)
+..+|.|+|+|.+|+.++..|+..|.++++|+|-+. .|++..+..|...++ ..++.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~--------------------~~~~g~~~dl~~~~~~~~~~~~v~ 65 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE--------------------GTPQGKGLDIAESSPVDGFDAKFT 65 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS--------------------SHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc--------------------hhHHHHHHHHhchhhhcCCCCEEE
Confidence 446789999999999999999999987899988432 133333445554432 34454
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
.... .+-++++|+||.+..
T Consensus 66 ~t~d------~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 66 GAND------YAAIEGADVVIVTAG 84 (324)
T ss_dssp EESS------GGGGTTCSEEEECCS
T ss_pred EeCC------HHHHCCCCEEEEccC
Confidence 4221 246789999999864
No 40
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.89 E-value=0.0011 Score=51.69 Aligned_cols=33 Identities=15% Similarity=-0.063 Sum_probs=29.3
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
..+|+|+|+|++|..+++.|...|+. ++++|.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCC
Confidence 46899999999999999999999988 9998843
No 41
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.83 E-value=0.0042 Score=55.90 Aligned_cols=75 Identities=16% Similarity=0.124 Sum_probs=52.9
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCc--eEEEE
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNV--EVTSN 192 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v--~I~~~ 192 (236)
..+|.|+|+|.+|+.++..|+..|. ++++++|-+ ..|++..+..|....|.. .+...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~--------------------~~k~~g~a~DL~~~~~~~~~~v~i~ 64 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN--------------------KEKAMGDVMDLNHGKAFAPQPVKTS 64 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC--------------------HHHHHHHHHHHHHTGGGSSSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc--------------------hHHHHHHHHHHHhccccccCCeEEE
Confidence 3578999999999999999999998 589998832 235666666666654432 22222
Q ss_pred ecCCCcchhhhcCCCcEEEEcCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
.. +.+-++++|+||.+..
T Consensus 65 ~~-----~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 65 YG-----TYEDCKDADIVCICAG 82 (326)
T ss_dssp EE-----CGGGGTTCSEEEECCS
T ss_pred eC-----cHHHhCCCCEEEEecc
Confidence 22 2245789999998864
No 42
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=96.75 E-value=0.009 Score=53.07 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=50.7
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC----CCceEEEE
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN----PNVEVTSN 192 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in----p~v~I~~~ 192 (236)
+|.|||+|.||+.+|..|+..|. ++|.|+|- ...|++..+.-|.... ...++...
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di--------------------~~~~~~G~a~DL~h~~~~~~~~~~i~~~ 61 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI--------------------AEDLAVGEAMDLAHAAAGIDKYPKIVGG 61 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS--------------------SHHHHHHHHHHHHHHHGGGTCCCEEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC--------------------CCCcchhhhhhhhcccccCCCCCeEecC
Confidence 57899999999999999998886 78999882 1235666666676633 23344332
Q ss_pred ecCCCcchhhhcCCCcEEEEcCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
. +.+-++++|+||.+..
T Consensus 62 ~------d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 62 A------DYSLLKGSEIIVVTAG 78 (294)
T ss_dssp S------CGGGGTTCSEEEECCC
T ss_pred C------CHHHhCCCCEEEEecC
Confidence 1 1245789999998875
No 43
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.72 E-value=0.0019 Score=54.20 Aligned_cols=86 Identities=15% Similarity=0.020 Sum_probs=61.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|+|+|.+|..+++.|...|. ++++|.|.- ++ +.+. +.+ ..+..+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~--------------------~~----~~~~---~~~--~~i~gd~ 58 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV--FVLAEDENV--------------------RK----KVLR---SGA--NFVHGDP 58 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGG--------------------HH----HHHH---TTC--EEEESCT
T ss_pred CEEEEECCChHHHHHHHHHHhCCe--EEEEECCHH--------------------HH----HHHh---cCC--eEEEcCC
Confidence 468999999999999999999887 888885421 11 1222 233 3444444
Q ss_pred Ccch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCc
Q psy9587 197 DEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 197 ~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip 233 (236)
++.. ..-++++|.||.++++......+...|++.+..
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 59 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 98 (234)
T ss_dssp TCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC
Confidence 4322 223788999999999988888888889887753
No 44
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.72 E-value=0.0095 Score=52.91 Aligned_cols=72 Identities=15% Similarity=0.279 Sum_probs=49.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHh----hCCCceEEEEe
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQN----LNPNVEVTSNE 193 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~----inp~v~I~~~~ 193 (236)
+|.|+|+|.+|+.++..|+..|+++|+|+|-+. .|++..+..|.. ....+++....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~--------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 60 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP--------------------GKPQGEALDLAHAAAELGVDIRISGSN 60 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST--------------------THHHHHHHHHHHHHHHHTCCCCEEEES
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh--------------------hhHHHHHHHHHHhhhhcCCCeEEEECC
Confidence 478999999999999999999996699999541 122333334433 34455666532
Q ss_pred cCCCcchhhhcCCCcEEEEcCC
Q psy9587 194 TKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d 215 (236)
. .+-++++|+||.+..
T Consensus 61 d------~~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 61 S------YEDMRGSDIVLVTAG 76 (308)
T ss_dssp C------GGGGTTCSEEEECCS
T ss_pred C------HHHhCCCCEEEEeCC
Confidence 2 135789999999853
No 45
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.70 E-value=0.0086 Score=53.24 Aligned_cols=73 Identities=14% Similarity=0.093 Sum_probs=50.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCC----CceEE
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNP----NVEVT 190 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp----~v~I~ 190 (236)
..+|.|||+|.+|+.++..|+..|. ++|.++|-+. .|++..+..|....+ .+++.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~--------------------~~~~~~~~dl~~~~~~~~~~~~i~ 65 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE--------------------SKAIGDAMDFNHGKVFAPKPVDIW 65 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH--------------------HHHHHHHHHHHHHTTSSSSCCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc--------------------chHHHHHhhHHHHhhhcCCCeEEE
Confidence 3579999999999999999999885 6799998431 133444445555444 34444
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
. . ..+-++++|+||.|..
T Consensus 66 ~--~-----~~~al~~aDvViia~~ 83 (316)
T 1ldn_A 66 H--G-----DYDDCRDADLVVICAG 83 (316)
T ss_dssp E--C-----CGGGTTTCSEEEECCS
T ss_pred c--C-----cHHHhCCCCEEEEcCC
Confidence 2 1 1245789999999953
No 46
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.66 E-value=0.0071 Score=54.23 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=51.1
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC----CCceEEE
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN----PNVEVTS 191 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in----p~v~I~~ 191 (236)
..+|.|+|+|.+|+.++..|+..|+++++|+|-+. .|++..+..|.... ..+++..
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~--------------------~~~~g~a~dL~~~~~~~~~~~~v~~ 64 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ--------------------GMPNGKALDLLQTCPIEGVDFKVRG 64 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS--------------------SHHHHHHHHHHTTHHHHTCCCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh--------------------HHHHHHHHHHHhhhhhcCCCcEEEE
Confidence 35789999999999999999999987899988432 13333444555432 2445543
Q ss_pred EecCCCcchhhhcCCCcEEEEcCC
Q psy9587 192 NETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
.. +.+-++++|+||.+..
T Consensus 65 t~------d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 65 TN------DYKDLENSDVVIVTAG 82 (321)
T ss_dssp ES------CGGGGTTCSEEEECCS
T ss_pred cC------CHHHHCCCCEEEEcCC
Confidence 21 1346789999998863
No 47
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.64 E-value=0.0026 Score=59.66 Aligned_cols=88 Identities=10% Similarity=0.061 Sum_probs=62.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKVD 197 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l~ 197 (236)
+|+|+|+|.+|..+|+.|...|.. ++++|.|.-. .+++.+.. .+..+.++.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~-v~vId~d~~~------------------------~~~~~~~~---~~~~i~Gd~~ 56 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENND-ITIVDKDGDR------------------------LRELQDKY---DLRVVNGHAS 56 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEE-EEEEESCHHH------------------------HHHHHHHS---SCEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-EEEEECCHHH------------------------HHHHHHhc---CcEEEEEcCC
Confidence 589999999999999999988854 8999965321 12233222 2334455444
Q ss_pred cch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHc-CCc
Q psy9587 198 EIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSK-SKI 233 (236)
Q Consensus 198 ~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~-~ip 233 (236)
... ..-++++|++|.++++.+....+..+|++. +.+
T Consensus 57 ~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~ 96 (461)
T 4g65_A 57 HPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTP 96 (461)
T ss_dssp CHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCS
T ss_pred CHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCc
Confidence 322 345788999999999999999998888874 443
No 48
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.63 E-value=0.011 Score=48.44 Aligned_cols=89 Identities=16% Similarity=0.064 Sum_probs=58.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|.| .|.+|..+++.|+..|. ++++++.+.-....+ . -.++.+..+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~--~~~~~~~~D 54 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIE---------------------------N--EHLKVKKAD 54 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCC---------------------------C--TTEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhc---------------------------c--CceEEEEec
Confidence 4689999 58999999999999994 688877653221111 0 134555556
Q ss_pred CCcch--hhhcCCCcEEEEcCCC-----------HHHHHHHHHHHHHcCC-cEE
Q psy9587 196 VDEIS--EEFVHGFDVVIATSCN-----------PNQLIKIDDFCRSKSK-ISL 235 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d~-----------~~~r~~In~~c~~~~i-p~I 235 (236)
+.+.. .+.++++|+||.+... ......+-+.|++.++ .+|
T Consensus 55 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 108 (227)
T 3dhn_A 55 VSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFL 108 (227)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 55432 4567788998888643 3455667778888776 344
No 49
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.60 E-value=0.0099 Score=51.57 Aligned_cols=36 Identities=11% Similarity=0.002 Sum_probs=32.4
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
++..+|+|+|+|++|..++..|...|+ +++++|.+.
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~~ 162 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRTK 162 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECCH
Confidence 456789999999999999999999999 899998764
No 50
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.54 E-value=0.0066 Score=53.40 Aligned_cols=110 Identities=10% Similarity=0.010 Sum_probs=67.1
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC--CCceEE
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN--PNVEVT 190 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in--p~v~I~ 190 (236)
.++.++|+|+|+||+|..++..|+..|+.++++++.+.-....+ ... +...-. +.+.+.- .++-|.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l-a~~-------~~~~~~----~~~~~~~~~aDiVIn 181 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNW-SLN-------INKINL----SHAESHLDEFDIIIN 181 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC-CSC-------CEEECH----HHHHHTGGGCSEEEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH-HHh-------cccccH----hhHHHHhcCCCEEEE
Confidence 35678899999999999999999999999999999876554555 321 111001 1222222 233333
Q ss_pred EEecCCCc-----chhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 191 SNETKVDE-----ISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 191 ~~~~~l~~-----~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
+.+..... ...+.++.-.+|+|...++.. -.+.+.|++.|.+++
T Consensus 182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~-T~ll~~A~~~G~~~~ 230 (277)
T 3don_A 182 TTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYK-TPILIEAEQRGNPIY 230 (277)
T ss_dssp CCC-------CCSSCCTTCCSSCEEEESCCSSSS-CHHHHHHHHTTCCEE
T ss_pred CccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCC-CHHHHHHHHCcCEEe
Confidence 32221111 123456667788999876532 246777888888764
No 51
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.53 E-value=0.02 Score=45.65 Aligned_cols=88 Identities=13% Similarity=0.029 Sum_probs=54.8
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|.|+ |++|.++++.|+..|. ++++++.+.- .+ .. +. .+ .++....+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~---~~-~~--~~--------------------~~--~~~~~~~D 54 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSS---RL-PS--EG--------------------PR--PAHVVVGD 54 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGG---GS-CS--SS--------------------CC--CSEEEESC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChh---hc-cc--cc--------------------CC--ceEEEEec
Confidence 46899997 9999999999999994 6777775432 12 10 00 11 23344445
Q ss_pred CCcch--hhhcCCCcEEEEcCCC----------HHHHHHHHHHHHHcCCc
Q psy9587 196 VDEIS--EEFVHGFDVVIATSCN----------PNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d~----------~~~r~~In~~c~~~~ip 233 (236)
+.+.. .+.++++|+||.+... ......+-+.|++.+++
T Consensus 55 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 104 (206)
T 1hdo_A 55 VLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVD 104 (206)
T ss_dssp TTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCC
Confidence 54422 3456778888887642 23445666677776653
No 52
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.48 E-value=0.013 Score=51.14 Aligned_cols=101 Identities=11% Similarity=0.120 Sum_probs=61.4
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCC---ceE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPN---VEV 189 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~---v~I 189 (236)
.+..+|+|.| .|.+|+.+++.|...|. +++.+|...-.. ......+....+. -.+
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------------~~~~~~~~~~~~~~~~~~~ 81 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGH--------------------QYNLDEVKTLVSTEQWSRF 81 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCC--------------------HHHHHHHHHTSCHHHHTTE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCc--------------------hhhhhhhhhccccccCCce
Confidence 3557899999 58899999999999995 466666322100 0111222222110 245
Q ss_pred EEEecCCCcch--hhhcCCCcEEEEcCCC-----------------HHHHHHHHHHHHHcCC-cEE
Q psy9587 190 TSNETKVDEIS--EEFVHGFDVVIATSCN-----------------PNQLIKIDDFCRSKSK-ISL 235 (236)
Q Consensus 190 ~~~~~~l~~~~--~~~l~~~DlVI~~~d~-----------------~~~r~~In~~c~~~~i-p~I 235 (236)
+.+..++.+.. .+.++++|+||.|... ...-..+-+.|.+.++ .||
T Consensus 82 ~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v 147 (351)
T 3ruf_A 82 CFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFT 147 (351)
T ss_dssp EEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEE
T ss_pred EEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 66667776533 4567899999988753 1122346677888776 454
No 53
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.46 E-value=0.0089 Score=51.91 Aligned_cols=78 Identities=21% Similarity=0.172 Sum_probs=52.0
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|+| +||+|..++..|+..|.. ++++|.+. .|++.+++.+... +.+.+..
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~~--------------------~~~~~l~~~~~~~-~~~~~~~- 173 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKL--------------------DKAQAAADSVNKR-FKVNVTA- 173 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSH--------------------HHHHHHHHHHHHH-HTCCCEE-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCH--------------------HHHHHHHHHHHhc-CCcEEEE-
Confidence 4567899999 999999999999999986 88877321 2455566666543 1222222
Q ss_pred ecCCCcc-h-hhhcCCCcEEEEcCC
Q psy9587 193 ETKVDEI-S-EEFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~-~-~~~l~~~DlVI~~~d 215 (236)
.++.+. . .+.++++|+||.|+.
T Consensus 174 -~D~~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 174 -AETADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp -EECCSHHHHHHHTTTCSEEEECCC
T ss_pred -ecCCCHHHHHHHHHhCCEEEECCC
Confidence 223221 1 456678899998874
No 54
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.45 E-value=0.019 Score=50.40 Aligned_cols=74 Identities=23% Similarity=0.250 Sum_probs=49.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCC----CceEEEE
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNP----NVEVTSN 192 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp----~v~I~~~ 192 (236)
+|+|||+|.+|+.++..|+..|+ .+++++|.+. .|++.++..+....+ .+++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~--------------------~~~~~~~~~l~~~~~~~~~~~~~~-- 60 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE--------------------AKVKADQIDFQDAMANLEAHGNIV-- 60 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH--------------------HHHHHHHHHHHHHGGGSSSCCEEE--
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH--------------------HHHHHHHHHHHhhhhhcCCCeEEE--
Confidence 58999999999999999999997 6788888432 133344444433221 22322
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCCHH
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCNPN 218 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~~~ 218 (236)
... .+.++++|+||.|+....
T Consensus 61 ~~d-----~~~~~~aDvViiav~~~~ 81 (309)
T 1hyh_A 61 IND-----WAALADADVVISTLGNIK 81 (309)
T ss_dssp ESC-----GGGGTTCSEEEECCSCGG
T ss_pred eCC-----HHHhCCCCEEEEecCCcc
Confidence 221 245689999999987643
No 55
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.44 E-value=0.011 Score=51.33 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=29.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..+|+|||+|.+|+.+|..|+..|. +++++|.+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCH
Confidence 3578999999999999999999998 588888543
No 56
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.43 E-value=0.013 Score=49.38 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=27.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|.|||+|.+|..++++|...|+.-..++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 58999999999999999998887655788865
No 57
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.42 E-value=0.018 Score=51.41 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=51.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC---CCceEEEE
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN---PNVEVTSN 192 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in---p~v~I~~~ 192 (236)
.+|.|+|+|.+|..++..|+..|. .+|.|+|-+ ..|++..+..|.... ..+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~--------------------~~~~~g~~~dl~~~~~~~~~~~v~~- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV--------------------KDRTKGDALDLEDAQAFTAPKKIYS- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS--------------------HHHHHHHHHHHHGGGGGSCCCEEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC--------------------chHHHHHHHHHHHHHHhcCCeEEEE-
Confidence 579999999999999999999885 568888832 124555555565543 3444443
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
. ..+-++++|+||.+...
T Consensus 65 -~-----~~~a~~~aDvVii~ag~ 82 (318)
T 1ez4_A 65 -G-----EYSDCKDADLVVITAGA 82 (318)
T ss_dssp -C-----CGGGGTTCSEEEECCCC
T ss_pred -C-----CHHHhCCCCEEEECCCC
Confidence 1 23457999999998753
No 58
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.36 E-value=0.02 Score=50.88 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=49.3
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC----CCceEE
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN----PNVEVT 190 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in----p~v~I~ 190 (236)
..+|.|||+|.+|..++..|+..|. .+|.|+|-+. .|++..+..|.... ..+++.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~--------------------~~~~g~~~dl~~~~~~~~~~~~v~ 65 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT--------------------EKVRGDVMDLKHATPYSPTTVRVK 65 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH--------------------HHHHHHHHHHHHHGGGSSSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh--------------------hHhhhhhhhHHhhhhhcCCCeEEE
Confidence 3579999999999999999999886 6799988431 13333333343332 334444
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
. . ..+-++++|+||.+..
T Consensus 66 ~--~-----~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 66 A--G-----EYSDCHDADLVVICAG 83 (317)
T ss_dssp E--C-----CGGGGTTCSEEEECCC
T ss_pred e--C-----CHHHhCCCCEEEECCC
Confidence 3 1 2345799999998874
No 59
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.36 E-value=0.0037 Score=53.28 Aligned_cols=79 Identities=10% Similarity=0.015 Sum_probs=51.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|||+|.+|+.++..|+..|...+.++|.+. .+++.+++.+ .+. ..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~--------------------~~~~~~~~~~-----g~~--~~---- 59 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE--------------------ESARELAQKV-----EAE--YT---- 59 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH--------------------HHHHHHHHHT-----TCE--EE----
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH--------------------HHHHHHHHHc-----CCc--ee----
Confidence 4689999999999999999999976577777332 1222222211 122 11
Q ss_pred CcchhhhcCCCcEEEEcCCCHHHHHHHHHHH
Q psy9587 197 DEISEEFVHGFDVVIATSCNPNQLIKIDDFC 227 (236)
Q Consensus 197 ~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c 227 (236)
....+.++++|+||.|+.+......+.++.
T Consensus 60 -~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~ 89 (266)
T 3d1l_A 60 -TDLAEVNPYAKLYIVSLKDSAFAELLQGIV 89 (266)
T ss_dssp -SCGGGSCSCCSEEEECCCHHHHHHHHHHHH
T ss_pred -CCHHHHhcCCCEEEEecCHHHHHHHHHHHH
Confidence 112345678999999998776655555554
No 60
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.36 E-value=0.016 Score=51.83 Aligned_cols=35 Identities=23% Similarity=0.031 Sum_probs=31.1
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+..+|.|+|+|.+|+.+|..|+..|.++++|+|-+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34579999999999999999999999889999954
No 61
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.36 E-value=0.018 Score=51.03 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=48.5
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCc-eEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC----CCceEEEE
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVK-SVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN----PNVEVTSN 192 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg-~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in----p~v~I~~~ 192 (236)
+|.|+|+|.+|+.++..|+..|.. +++|+|-+. .|++..+..|...+ ...++...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~--------------------~~~~g~~~dl~~~~~~~~~~~~i~~t 61 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE--------------------DLAVGEAMDLAHAAAGIDKYPKIVGG 61 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH--------------------HHHHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh--------------------HHHHHHHHHHHhhhhhcCCCCEEEEe
Confidence 578999999999999999999974 799988432 12332333344433 23455443
Q ss_pred ecCCCcchhhhcCCCcEEEEcCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
.. .+-++++|+||.+..
T Consensus 62 ~d------~~a~~~aDiVViaag 78 (294)
T 1oju_A 62 AD------YSLLKGSEIIVVTAG 78 (294)
T ss_dssp SC------GGGGTTCSEEEECCC
T ss_pred CC------HHHhCCCCEEEECCC
Confidence 21 356789999998864
No 62
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.34 E-value=0.013 Score=51.67 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=47.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC---CCceEEEEe
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN---PNVEVTSNE 193 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in---p~v~I~~~~ 193 (236)
+|+|||+|.+|+.++..|+..|. ++++|+|-+. . |++..+..+.... +.+++..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~---~-----------------~~~~~~~~l~~~~~~~~~~~i~~-- 59 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE---D-----------------RAQAEAEDIAHAAPVSHGTRVWH-- 59 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH---H-----------------HHHHHHHHHTTSCCTTSCCEEEE--
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH---H-----------------HHHHHHHhhhhhhhhcCCeEEEE--
Confidence 58999999999999999999985 5799998542 1 2222233333332 2334442
Q ss_pred cCCCcchhhhcCCCcEEEEcCCC
Q psy9587 194 TKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
. +.+-++++|+||.+...
T Consensus 60 ~-----~~~a~~~aDvVIi~~~~ 77 (304)
T 2v6b_A 60 G-----GHSELADAQVVILTAGA 77 (304)
T ss_dssp E-----CGGGGTTCSEEEECC--
T ss_pred C-----CHHHhCCCCEEEEcCCC
Confidence 1 12457899999999854
No 63
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.33 E-value=0.027 Score=45.99 Aligned_cols=85 Identities=20% Similarity=0.171 Sum_probs=58.5
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
+|+|.| .|++|.++++.|+..|. ++++++.+. +.+ . . . + .++.+..++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~---~~~-~-~-------~----------------~--~~~~~~~D~ 50 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKV---EQV-P-Q-------Y----------------N--NVKAVHFDV 50 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSG---GGS-C-C-------C----------------T--TEEEEECCT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCc---cch-h-h-------c----------------C--CceEEEecc
Confidence 478899 78999999999999995 577777543 122 1 0 0 1 345566666
Q ss_pred Cc-ch--hhhcCCCcEEEEcCC---------CHHHHHHHHHHHHHcCCc
Q psy9587 197 DE-IS--EEFVHGFDVVIATSC---------NPNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 197 ~~-~~--~~~l~~~DlVI~~~d---------~~~~r~~In~~c~~~~ip 233 (236)
.+ .. .+.++++|+||.+.. |...-..+-+.|++.+++
T Consensus 51 ~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~ 99 (219)
T 3dqp_A 51 DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVK 99 (219)
T ss_dssp TSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCC
Confidence 55 32 456788999998874 445566777888888764
No 64
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.31 E-value=0.015 Score=52.73 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=50.8
Q ss_pred cceEEEEcC-ChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhh-CCCceEEEE
Q psy9587 116 IYVYSTGPL-TRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNL-NPNVEVTSN 192 (236)
Q Consensus 116 ~~~VlIVG~-GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i-np~v~I~~~ 192 (236)
..+|.|||+ |.+|+.+|..|+..|. .+|.|+|-+ ..|++..+..|... +|...+...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~--------------------~~k~~g~a~DL~~~~~~~~~i~~t 67 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF--------------------AVGLEGVAEEIRHCGFEGLNLTFT 67 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC--------------------HHHHHHHHHHHHHHCCTTCCCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC--------------------chhHHHHHHhhhhCcCCCCceEEc
Confidence 457899997 9999999999999997 579998832 12555555555554 222222221
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
....+-++++|+||.|...
T Consensus 68 -----~d~~~al~dADvVvitaG~ 86 (343)
T 3fi9_A 68 -----SDIKEALTDAKYIVSSGGA 86 (343)
T ss_dssp -----SCHHHHHTTEEEEEECCC-
T ss_pred -----CCHHHHhCCCCEEEEccCC
Confidence 1123457899999988653
No 65
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.31 E-value=0.0045 Score=57.32 Aligned_cols=87 Identities=13% Similarity=0.176 Sum_probs=61.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
-+|+|+|+|.+|..+++.|...|+. ++++|.|.-. + +.+++. .+ .++.++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~-vvvId~d~~~--------------------v----~~~~~~--g~--~vi~GDa 55 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVK-MVVLDHDPDH--------------------I----ETLRKF--GM--KVFYGDA 55 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-EEEEECCHHH--------------------H----HHHHHT--TC--CCEESCT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCC-EEEEECCHHH--------------------H----HHHHhC--CC--eEEEcCC
Confidence 4689999999999999999999975 8888865421 1 112222 12 2333443
Q ss_pred Ccch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCC
Q psy9587 197 DEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSK 232 (236)
Q Consensus 197 ~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~i 232 (236)
+... ..-+.++|+||.|+++......+-..+++.+.
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 3322 22367899999999999999999999998764
No 66
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.31 E-value=0.018 Score=51.45 Aligned_cols=73 Identities=19% Similarity=0.134 Sum_probs=50.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC----CCceEEEE
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN----PNVEVTSN 192 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in----p~v~I~~~ 192 (236)
+|.|+|+|.+|+.++..|+..|+ ..++|+|-+. .|++..+..|.... ..+++...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~--------------------~k~~g~a~DL~~~~~~~~~~~~v~~~ 61 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD--------------------GMPQGKALDMRESSPIHGFDTRVTGT 61 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST--------------------THHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch--------------------HHHHHHHHHHhccccccCCCcEEEEC
Confidence 57899999999999999999997 4788888432 23444444555432 24455432
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
. +.+-++++|+||.+...
T Consensus 62 -~-----~~~a~~~aDvVii~ag~ 79 (314)
T 3nep_X 62 -N-----DYGPTEDSDVCIITAGL 79 (314)
T ss_dssp -S-----SSGGGTTCSEEEECCCC
T ss_pred -C-----CHHHhCCCCEEEECCCC
Confidence 1 23457899999998753
No 67
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.29 E-value=0.025 Score=49.89 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=29.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|.+|+.++..|+..|...++++|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 478999999999999999999998569999965
No 68
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.28 E-value=0.0099 Score=52.21 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=63.1
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|.|+ |.+|+.+++.|+..| .++++++.+.-. ...|...+ +.+.. + .++.+..+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~----------------~~~~~~~~-~~l~~--~--~v~~~~~D 68 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPR----------------SPSKAKIF-KALED--K--GAIIVYGL 68 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCC----------------CHHHHHHH-HHHHH--T--TCEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCC----------------ChhHHHHH-HHHHh--C--CcEEEEee
Confidence 57899997 899999999999999 457776643200 01122211 12222 2 34556666
Q ss_pred CCcch--hhhcC--CCcEEEEcCC--CHHHHHHHHHHHHHcC-CcEE
Q psy9587 196 VDEIS--EEFVH--GFDVVIATSC--NPNQLIKIDDFCRSKS-KISL 235 (236)
Q Consensus 196 l~~~~--~~~l~--~~DlVI~~~d--~~~~r~~In~~c~~~~-ip~I 235 (236)
+.+.. .+.++ ++|+||.+.. +......+-+.|++.+ ++.+
T Consensus 69 l~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 69 INEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp TTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred cCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 66532 45677 9999999875 4566677888888888 6544
No 69
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.27 E-value=0.05 Score=48.11 Aligned_cols=78 Identities=8% Similarity=0.112 Sum_probs=54.0
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
++..+|+|.| .|++|+++++.|+.. |..++++++.+.- |.+.+.+.+. ...+..
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~--------------------~~~~~~~~~~----~~~v~~ 74 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDEL--------------------KQSEMAMEFN----DPRMRF 74 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHH--------------------HHHHHHHHHC----CTTEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChh--------------------hHHHHHHHhc----CCCEEE
Confidence 4557899999 589999999999999 9878888774321 2223333332 235666
Q ss_pred EecCCCcch--hhhcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EEFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~~l~~~DlVI~~~d 215 (236)
+..++.+.. .+.++++|+||.+..
T Consensus 75 ~~~Dl~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 75 FIGDVRDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp EECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred EECCCCCHHHHHHHHhcCCEEEECCC
Confidence 777776543 456789999998864
No 70
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.25 E-value=0.021 Score=51.17 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=51.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC---CCceEE
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN---PNVEVT 190 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in---p~v~I~ 190 (236)
+..+|.|+|+|.+|..++..|+..|. .+|.|+|-+ ..|++..+..|.... ..+++.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~--------------------~~~~~g~~~dl~~~~~~~~~~~i~ 67 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF--------------------KDKTKGDAIDLSNALPFTSPKKIY 67 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC--------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC--------------------chHhHHHHHHHHHHHHhcCCeEEE
Confidence 34679999999999999999998885 468888732 124555555555443 344444
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
. . ..+-++++|+||.+...
T Consensus 68 ~--~-----~~~a~~~aDvVii~ag~ 86 (326)
T 2zqz_A 68 S--A-----EYSDAKDADLVVITAGA 86 (326)
T ss_dssp E--C-----CGGGGGGCSEEEECCCC
T ss_pred E--C-----CHHHhCCCCEEEEcCCC
Confidence 3 1 23457899999988753
No 71
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.25 E-value=0.02 Score=51.60 Aligned_cols=75 Identities=16% Similarity=0.132 Sum_probs=52.9
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCC---ceEE
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPN---VEVT 190 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~---v~I~ 190 (236)
+..+|.|+|+|.+|+.++..|+..|. ..++|+|-+ ..|++..+..|....+. ..+.
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~--------------------~~~~~g~a~DL~~~~~~~~~~~i~ 77 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI--------------------EDKLKGEMMDLQHGSLFLKTPKIV 77 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC--------------------HHHHHHHHHHHHHTGGGCSCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC--------------------hHHHHHHHHhhhhhhhccCCCeEE
Confidence 45689999999999999999999987 478898832 24677777777765322 2222
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
. .. +.+-++++|+||.+..
T Consensus 78 ~-~~-----d~~~~~~aDiVvi~aG 96 (331)
T 4aj2_A 78 S-SK-----DYSVTANSKLVIITAG 96 (331)
T ss_dssp E-CS-----SGGGGTTEEEEEECCS
T ss_pred E-cC-----CHHHhCCCCEEEEccC
Confidence 1 11 2234799999998864
No 72
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.25 E-value=0.031 Score=49.44 Aligned_cols=74 Identities=19% Similarity=0.074 Sum_probs=48.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHh----hCCCceEEEE
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQN----LNPNVEVTSN 192 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~----inp~v~I~~~ 192 (236)
.+|.|||+|.+|+.++..|+..|.-.++|+|-+. + |++..+..|.+ .....++...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~---~-----------------~~~g~~~dl~~~~~~~~~~~~i~~t 62 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE---G-----------------VPQGKALDLYEASPIEGFDVRVTGT 62 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS---S-----------------HHHHHHHHHHTTHHHHTCCCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc---c-----------------HHHHHHHhHHHhHhhcCCCeEEEEC
Confidence 3689999999999999999999973499988542 1 22222223333 3334455543
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
.. .+-++++|+||.+...
T Consensus 63 ~d------~~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 63 NN------YADTANSDVIVVTSGA 80 (309)
T ss_dssp SC------GGGGTTCSEEEECCCC
T ss_pred CC------HHHHCCCCEEEEcCCC
Confidence 22 1347899999999743
No 73
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.24 E-value=0.016 Score=48.17 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=28.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
...+|+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 44679999999999999999999996 58888754
No 74
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.011 Score=55.52 Aligned_cols=37 Identities=5% Similarity=-0.234 Sum_probs=29.0
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++..+|+|+|+|++|..++..|+..|--+++++|.+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3456789999999999999999999844478888754
No 75
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.23 E-value=0.0079 Score=49.05 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=55.0
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
+|+|.|+ |++|.++++.|+..|. ++++++.+.- +.. .+ ..+ .++.+..++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~--------------------~~~----~~--~~~--~~~~~~~D~ 52 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQ--------------------KAA----DR--LGA--TVATLVKEP 52 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH--------------------HHH----HH--TCT--TSEEEECCG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccc--------------------ccc----cc--cCC--CceEEeccc
Confidence 4889996 8999999999999996 4666653211 111 11 112 334455555
Q ss_pred CcchhhhcCCCcEEEEcCCC----------HHHHHHHHHHHHHcCCcEE
Q psy9587 197 DEISEEFVHGFDVVIATSCN----------PNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 197 ~~~~~~~l~~~DlVI~~~d~----------~~~r~~In~~c~~~~ip~I 235 (236)
.+...+.+.++|+||.+... ...-..+-+.|++.+..+|
T Consensus 53 ~d~~~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 101 (224)
T 3h2s_A 53 LVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAV 101 (224)
T ss_dssp GGCCHHHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEE
T ss_pred ccccHhhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEE
Confidence 54333667899999988743 3344455566666665554
No 76
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.20 E-value=0.031 Score=49.85 Aligned_cols=33 Identities=18% Similarity=0.101 Sum_probs=29.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|.+|+.++..|+..|...++|+|-|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 478999999999999999999998449999854
No 77
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=96.20 E-value=0.012 Score=51.35 Aligned_cols=99 Identities=6% Similarity=0.089 Sum_probs=57.1
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCc-eEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVK-SVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg-~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
+..+|+|.|+ |.+|+.+++.|+..|.. ++..+|...... .. . .+..+...-.++.+
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~-~~--~-------------------~l~~~~~~~~~~~~ 80 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG-NL--N-------------------NVKSIQDHPNYYFV 80 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC-CG--G-------------------GGTTTTTCTTEEEE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc-ch--h-------------------hhhhhccCCCeEEE
Confidence 4467999997 89999999999999943 355555432111 11 0 01111112245556
Q ss_pred ecCCCcch--hhhcCC--CcEEEEcCCCH-----------------HHHHHHHHHHHHcCCc-EE
Q psy9587 193 ETKVDEIS--EEFVHG--FDVVIATSCNP-----------------NQLIKIDDFCRSKSKI-SL 235 (236)
Q Consensus 193 ~~~l~~~~--~~~l~~--~DlVI~~~d~~-----------------~~r~~In~~c~~~~ip-~I 235 (236)
..++.+.. .+.+++ +|+||.+.... ..-..+-+.|++.+++ +|
T Consensus 81 ~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v 145 (346)
T 4egb_A 81 KGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLV 145 (346)
T ss_dssp ECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEE
T ss_pred EcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 66665432 344554 88888775421 1235667788888776 55
No 78
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.19 E-value=0.005 Score=54.33 Aligned_cols=114 Identities=12% Similarity=-0.027 Sum_probs=63.8
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
++.++|+|+|+|++|..++..|+..|+.+++++|.+.-....+ -..+-....++-. . +.+.+.-....+.+..
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~l-a~~~~~~~~~~~~--~----~~~~~~~~~aDivIn~ 211 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERL-VREGDERRSAYFS--L----AEAETRLAEYDIIINT 211 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHH-HHHSCSSSCCEEC--H----HHHHHTGGGCSEEEEC
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH-HHHhhhccCceee--H----HHHHhhhccCCEEEEC
Confidence 4567899999999999999999999999999998764332223 1111000000000 0 1222222223333332
Q ss_pred cCCCc--------chhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDE--------ISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~--------~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
..... ...+.++.-.+|+|...++... .+.+.+++.|..++
T Consensus 212 t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T-~ll~~A~~~G~~~v 260 (297)
T 2egg_A 212 TSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLET-KWLKEAKARGARVQ 260 (297)
T ss_dssp SCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSC-HHHHHHHHTTCEEE
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCC-HHHHHHHHCcCEEE
Confidence 22111 1123455556788888764322 25677888887654
No 79
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.17 E-value=0.04 Score=47.31 Aligned_cols=88 Identities=9% Similarity=0.096 Sum_probs=56.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|.| .|.+|+.+++.|...|. +++.++.+. ... + +. .++.+..+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~-----------------~-----~~------~~~~~~~D 50 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSI---GNK-----------------A-----IN------DYEYRVSD 50 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC---C---------------------------------CCEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCC---Ccc-----------------c-----CC------ceEEEEcc
Confidence 4689999 68999999999999997 577766541 111 0 00 33444445
Q ss_pred CCcch-hhhcCCCcEEEEcCCC-------------HHHHHHHHHHHHHcCCc-EEC
Q psy9587 196 VDEIS-EEFVHGFDVVIATSCN-------------PNQLIKIDDFCRSKSKI-SLF 236 (236)
Q Consensus 196 l~~~~-~~~l~~~DlVI~~~d~-------------~~~r~~In~~c~~~~ip-~I~ 236 (236)
+.... .+.++++|+||.|... ...-..+-+.|++.+++ +||
T Consensus 51 l~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~ 106 (311)
T 3m2p_A 51 YTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVY 106 (311)
T ss_dssp CCHHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccHHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 54111 4566788988887532 33446777888888876 553
No 80
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.13 E-value=0.012 Score=52.16 Aligned_cols=72 Identities=21% Similarity=0.257 Sum_probs=47.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC---CCceEEEEe
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN---PNVEVTSNE 193 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in---p~v~I~~~~ 193 (236)
+|+|||+|.+|+.++..|+..|. +.++++|.+. .|++.++..+.... +..++..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~--------------------~~~~~~~~~l~~~~~~~~~~~i~~-- 59 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK--------------------KRAEGDALDLIHGTPFTRRANIYA-- 59 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH--------------------HHHHHHHHHHHHHGGGSCCCEEEE--
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh--------------------HHHHHHHHHHHhhhhhcCCcEEEe--
Confidence 58899999999999999999995 4688888542 12233333333222 2334432
Q ss_pred cCCCcchhhhcCCCcEEEEcCCC
Q psy9587 194 TKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
. +.+.++++|+||.|...
T Consensus 60 ~-----d~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 60 G-----DYADLKGSDVVIVAAGV 77 (319)
T ss_dssp C-----CGGGGTTCSEEEECCCC
T ss_pred C-----CHHHhCCCCEEEEccCC
Confidence 1 12346899999999864
No 81
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.13 E-value=0.0051 Score=54.33 Aligned_cols=109 Identities=12% Similarity=0.141 Sum_probs=65.7
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
++.++|+|+|+||.|..++..|...|+++|++++.+.-....| -..+-. + .. +.+.++..++-|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L-a~~~~~----~---~~----~~l~~l~~DivInaTp 187 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI-YGEFKV----I---SY----DELSNLKGDVIINCTP 187 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH-CTTSEE----E---EH----HHHTTCCCSEEEECSS
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHhcCc----c---cH----HHHHhccCCEEEECCc
Confidence 4667899999999999999999999999999998765444444 332100 0 00 1122222233333332
Q ss_pred cCCCc------chhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDE------ISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~------~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
..... ...+.++...+|+|...++.. -.+-+.|++.|.+++
T Consensus 188 ~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~-T~ll~~A~~~G~~~~ 234 (282)
T 3fbt_A 188 KGMYPKEGESPVDKEVVAKFSSAVDLIYNPVE-TLFLKYARESGVKAV 234 (282)
T ss_dssp TTSTTSTTCCSSCHHHHTTCSEEEESCCSSSS-CHHHHHHHHTTCEEE
T ss_pred cCccCCCccCCCCHHHcCCCCEEEEEeeCCCC-CHHHHHHHHCcCeEe
Confidence 21111 134556777788888876532 234556777776654
No 82
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.10 E-value=0.018 Score=50.82 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=30.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|.+|+.++.+|+..|...++++|.+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 579999999999999999999998789999975
No 83
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.09 E-value=0.015 Score=50.34 Aligned_cols=94 Identities=15% Similarity=0.217 Sum_probs=57.3
Q ss_pred eEEEEcC-ChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
+|+|+|| |.+|..+++.+... |+.-+.++|.+ .++ .+ +....+++-|......
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~----~dl--------------------~~-~~~~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG----DPL--------------------SL-LTDGNTEVVIDFTHPD 56 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----CCT--------------------HH-HHHTTCCEEEECSCTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----CCH--------------------HH-HhccCCcEEEEccChH
Confidence 5899997 99999999998865 76555566642 122 11 1122445444433222
Q ss_pred CCcchhh--hcCCCcEEEEcCC-CHHHHHHHHHHHHHc-CCcEEC
Q psy9587 196 VDEISEE--FVHGFDVVIATSC-NPNQLIKIDDFCRSK-SKISLF 236 (236)
Q Consensus 196 l~~~~~~--~l~~~DlVI~~~d-~~~~r~~In~~c~~~-~ip~I~ 236 (236)
....+.. .-.+.++|+.++. +.+....|.++|++. ++|+++
T Consensus 57 a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~ 101 (245)
T 1p9l_A 57 VVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLI 101 (245)
T ss_dssp THHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEE
Confidence 2222222 2246788887764 456677888888876 888764
No 84
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.09 E-value=0.017 Score=52.12 Aligned_cols=84 Identities=7% Similarity=-0.040 Sum_probs=53.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhC---------CceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSG---------VKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNV 187 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~G---------Vg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v 187 (236)
.+|.|+|+|.+|+.+++.|.... +.-..+.|.+.-. - +. ++. .
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~---~--~~-------~~~----------------~ 55 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRK---P--RA-------IPQ----------------E 55 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTS---C--CS-------SCG----------------G
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHH---h--hc-------cCc----------------c
Confidence 57899999999999999998753 3334555654211 1 11 110 0
Q ss_pred eEEEEecCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 188 EVTSNETKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 188 ~I~~~~~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
.+ ..++ .+++ +.|+|++|+.+......+...|.++|+.+|+
T Consensus 56 ~~---~~d~----~~ll-~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 56 LL---RAEP----FDLL-EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp GE---ESSC----CCCT-TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred cc---cCCH----HHHh-CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 01 1111 2344 8999999998876656667778889998874
No 85
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.06 E-value=0.0095 Score=50.45 Aligned_cols=33 Identities=9% Similarity=0.038 Sum_probs=28.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC---ceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV---KSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV---g~I~LvD~D 149 (236)
.+|.|||+|.+|+.+++.|+..|. .+++++|.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 368999999999999999999997 367887754
No 86
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.04 E-value=0.0082 Score=51.17 Aligned_cols=32 Identities=9% Similarity=-0.171 Sum_probs=28.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+|+|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 58999999999999999999997 689988764
No 87
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.02 E-value=0.024 Score=50.33 Aligned_cols=71 Identities=21% Similarity=0.156 Sum_probs=49.9
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC---CCceEEEEe
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN---PNVEVTSNE 193 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in---p~v~I~~~~ 193 (236)
+|.|+|+|.+|..++..|+..|. ++|.|+|-+ ..|++..+..|.... ..+++..
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~--------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLD--------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS--------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC--------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 58999999999999999998875 568888843 124555555565543 3445553
Q ss_pred cCCCcchhhhcCCCcEEEEcCC
Q psy9587 194 TKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d 215 (236)
. ..+-++++|+||.+..
T Consensus 60 ~-----~~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 60 G-----SYGDLEGARAVVLAAG 76 (310)
T ss_dssp C-----CGGGGTTEEEEEECCC
T ss_pred C-----CHHHhCCCCEEEECCC
Confidence 1 1345799999998864
No 88
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.00 E-value=0.035 Score=48.30 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=28.5
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++..+|+|.|+ |++|+.+++.|+..|. +++++|.+
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 34567999996 8999999999999995 57777753
No 89
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.00 E-value=0.034 Score=51.87 Aligned_cols=34 Identities=12% Similarity=-0.107 Sum_probs=29.2
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.++|+|+|+|++|..++..|+..|. +++++|.+.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~ 36 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTL 36 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCH
Confidence 3578999999999999999999995 488888654
No 90
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.99 E-value=0.032 Score=50.31 Aligned_cols=75 Identities=15% Similarity=0.174 Sum_probs=50.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCC---CceEE
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNP---NVEVT 190 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp---~v~I~ 190 (236)
...+|.|+|+|.+|+.+|..|+..|+ +.++|+|-+ ..|++..+..|....+ ..++.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~--------------------~~~~~g~a~DL~~~~~~~~~~~i~ 79 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM--------------------EDKLKGEMMDLEHGSLFLHTAKIV 79 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC--------------------HHHHHHHHHHHHHHGGGSCCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC--------------------HHHHHHHHHHhhhhhhcccCCeEE
Confidence 34679999999999999999999998 679998832 1234444555554422 33333
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
.. .++ +-++++|+||.+..
T Consensus 80 ~t-~d~-----~~~~daDiVIitaG 98 (330)
T 3ldh_A 80 SG-KDY-----SVSAGSKLVVITAG 98 (330)
T ss_dssp EE-SSS-----CSCSSCSEEEECCS
T ss_pred Ec-CCH-----HHhCCCCEEEEeCC
Confidence 32 222 23799999998753
No 91
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.98 E-value=0.0073 Score=52.62 Aligned_cols=80 Identities=10% Similarity=0.096 Sum_probs=51.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC--ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV--KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV--g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.+|.|||+|..|+.++..|+..|. .+++++|.+.- |++.+++. . .+. .
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~--------------------~~~~l~~~----~-gi~--~--- 53 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD--------------------KLDFFKEK----C-GVH--T--- 53 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH--------------------HHHHHHHT----T-CCE--E---
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH--------------------HHHHHHHH----c-CCE--E---
Confidence 468999999999999999999996 26888774321 22222221 1 121 1
Q ss_pred CCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHH
Q psy9587 195 KVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCR 228 (236)
Q Consensus 195 ~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~ 228 (236)
.....+.++++|+||.|+.+......+.++..
T Consensus 54 --~~~~~~~~~~aDvVilav~p~~~~~vl~~l~~ 85 (280)
T 3tri_A 54 --TQDNRQGALNADVVVLAVKPHQIKMVCEELKD 85 (280)
T ss_dssp --ESCHHHHHSSCSEEEECSCGGGHHHHHHHHHH
T ss_pred --eCChHHHHhcCCeEEEEeCHHHHHHHHHHHHh
Confidence 11234567889999999876555555655543
No 92
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=95.98 E-value=0.063 Score=48.65 Aligned_cols=82 Identities=12% Similarity=0.095 Sum_probs=57.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCC--CceEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNP--NVEVT 190 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp--~v~I~ 190 (236)
++..+|+|.| .|++|+++++.|+..|..+++++|... .+...+.+.|.+..+ ...++
T Consensus 33 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~--------------------~~~~~~~~~l~~~~~~~~~~v~ 92 (399)
T 3nzo_A 33 VSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISE--------------------NNMVELVRDIRSSFGYINGDFQ 92 (399)
T ss_dssp HHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCH--------------------HHHHHHHHHHHHHTCCCSSEEE
T ss_pred hCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCc--------------------chHHHHHHHHHHhcCCCCCcEE
Confidence 3557899999 578999999999999987888877321 233445566666655 24677
Q ss_pred EEecCCCcch--hhhc--CCCcEEEEcCC
Q psy9587 191 SNETKVDEIS--EEFV--HGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~--~~~l--~~~DlVI~~~d 215 (236)
.+..++.+.. ...+ .++|+||.+..
T Consensus 93 ~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 93 TFALDIGSIEYDAFIKADGQYDYVLNLSA 121 (399)
T ss_dssp EECCCTTSHHHHHHHHHCCCCSEEEECCC
T ss_pred EEEEeCCCHHHHHHHHHhCCCCEEEECCC
Confidence 7777776543 2222 58999998753
No 93
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.98 E-value=0.0073 Score=47.80 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=28.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
-|+|||+|..|..+|..|++.|+. ++|+|..
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~-V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-VHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEECC
Confidence 489999999999999999999996 8899854
No 94
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.96 E-value=0.026 Score=48.18 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=59.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|+|+ |.+|+.+++.|+..|. ++++++.+.-. .+ ...|+..+ +.+. .+. ++....+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~-----~~---------~~~~~~~~-~~l~--~~~--v~~v~~D 64 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTA-----SS---------NSEKAQLL-ESFK--ASG--ANIVHGS 64 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCT-----TT---------THHHHHHH-HHHH--TTT--CEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCccc-----cc---------CHHHHHHH-HHHH--hCC--CEEEEec
Confidence 46899996 8999999999999994 46665532210 00 01122222 1121 233 4455566
Q ss_pred CCcch--hhhcCCCcEEEEcCCCH--HHHHHHHHHHHHcC-CcE
Q psy9587 196 VDEIS--EEFVHGFDVVIATSCNP--NQLIKIDDFCRSKS-KIS 234 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d~~--~~r~~In~~c~~~~-ip~ 234 (236)
+.+.. .+.++++|+||.+.... .....+-+.|++.+ ++-
T Consensus 65 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 108 (308)
T 1qyc_A 65 IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKR 108 (308)
T ss_dssp TTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSE
T ss_pred cCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCce
Confidence 65432 45678899999987642 34456677888877 543
No 95
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.95 E-value=0.011 Score=52.65 Aligned_cols=33 Identities=21% Similarity=0.085 Sum_probs=29.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D 149 (236)
.+|.|||+|.+|..++..|+..|. ++|+|+|-+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 578999999999999999999886 679999954
No 96
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.93 E-value=0.029 Score=50.18 Aligned_cols=33 Identities=15% Similarity=0.037 Sum_probs=29.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|.+|+.+|..|+..|...++|+|-|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 478999999999999999999998459999955
No 97
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.045 Score=47.45 Aligned_cols=82 Identities=9% Similarity=0.088 Sum_probs=60.2
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCc--eEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVK--SVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg--~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~ 190 (236)
++.++|+|.| .||+|.++|+.|+..|.+ ++.++|.+ ..+.+.+++.+...++..++.
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~--------------------~~~~~~~~~~l~~~~~~~~~~ 90 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR--------------------LEKLEELKKTIDQEFPNAKVH 90 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC--------------------HHHHHHHHHHHHHHCTTCEEE
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC--------------------HHHHHHHHHHHHhhCCCCeEE
Confidence 4667899999 469999999999999985 67776632 135666788888888888888
Q ss_pred EEecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 191 SNETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
.+..++++.. .. .+...|++|.+..
T Consensus 91 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 91 VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG 124 (287)
T ss_dssp EEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCC
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 8888776532 22 2346899998754
No 98
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.91 E-value=0.061 Score=44.24 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=48.1
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCc-eEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVK-SVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg-~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
+..+|+|.| .|++|.++++.|+..|.. +++++|.+.- .+ ... + .+ .+..+
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~---~~-~~~-----------~-----------~~--~~~~~ 68 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL---TF-DEE-----------A-----------YK--NVNQE 68 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC---CC-CSG-----------G-----------GG--GCEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCC---Cc-ccc-----------c-----------cC--CceEE
Confidence 346789999 689999999999999973 6888775421 12 100 0 00 23444
Q ss_pred ecCCCcch--hhhcCCCcEEEEcCCC
Q psy9587 193 ETKVDEIS--EEFVHGFDVVIATSCN 216 (236)
Q Consensus 193 ~~~l~~~~--~~~l~~~DlVI~~~d~ 216 (236)
..++++.. .+.++++|+||.|...
T Consensus 69 ~~D~~d~~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 69 VVDFEKLDDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp ECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred ecCcCCHHHHHHHhcCCCEEEECCCc
Confidence 55554422 4567889999998753
No 99
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.90 E-value=0.06 Score=45.65 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=55.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
+|+|.| .|.+|+.+++.|...+-.++++++.+.-....+ ..+ .++....++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~--------------------------~~~--~v~~~~~D~ 53 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD--------------------------WRG--KVSVRQLDY 53 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG--------------------------GBT--TBEEEECCT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh--------------------------hhC--CCEEEEcCC
Confidence 478899 589999999999987334566666443211111 001 344555566
Q ss_pred Ccch--hhhcCCCcEEEEcCCC-------HHHHHHHHHHHHHcCCc
Q psy9587 197 DEIS--EEFVHGFDVVIATSCN-------PNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 197 ~~~~--~~~l~~~DlVI~~~d~-------~~~r~~In~~c~~~~ip 233 (236)
.+.. ...++++|+||.+... ...-..+-+.|++.+++
T Consensus 54 ~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~ 99 (289)
T 3e48_A 54 FNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVA 99 (289)
T ss_dssp TCHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCC
Confidence 5432 4567889999988643 23445677788888764
No 100
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.88 E-value=0.034 Score=49.69 Aligned_cols=33 Identities=18% Similarity=0.067 Sum_probs=29.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|.+|+.+|..|+..|...++|+|-+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 478999999999999999999999559999965
No 101
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.88 E-value=0.096 Score=45.03 Aligned_cols=79 Identities=10% Similarity=0.064 Sum_probs=50.2
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE-
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN- 192 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~- 192 (236)
+..+|+|.|+ |++|+++++.|+..|. +++++|.+. .+.+.+.+.+....+ -.++.+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA--------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH--------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc--------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 4467999996 8999999999999986 466655321 123333444443332 245555
Q ss_pred ecCCCcch--hhhcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--EEFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~~~l~~~DlVI~~~d 215 (236)
..++.+.. .+.++++|+||.+..
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A~ 92 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIAS 92 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECCC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeCC
Confidence 45555422 455678999998863
No 102
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.85 E-value=0.026 Score=49.97 Aligned_cols=34 Identities=9% Similarity=-0.054 Sum_probs=29.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|.|||+|.+|+.++..|+..|..+++++|.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5799999999999999999999955788888653
No 103
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.82 E-value=0.014 Score=51.78 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=29.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCc-eEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVK-SVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg-~I~LvD~D 149 (236)
..+|+|||+|.+|+.+++.|...|.. +++++|.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 35799999999999999999999984 68888754
No 104
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.82 E-value=0.015 Score=49.90 Aligned_cols=32 Identities=22% Similarity=0.157 Sum_probs=27.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCc-eEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVK-SVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg-~I~LvD~D 149 (236)
+|+|||+|.+|+.++..|...|.. +++++|.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 589999999999999999999963 57777743
No 105
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.81 E-value=0.022 Score=46.05 Aligned_cols=85 Identities=9% Similarity=0.057 Sum_probs=53.6
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
+|+|.| .|++|..+++.|+..|. ++++++.+. .+. ..+.+. ++....++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~--------------------~~~-------~~~~~~--~~~~~~D~ 51 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA--------------------GKI-------TQTHKD--INILQKDI 51 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS--------------------HHH-------HHHCSS--SEEEECCG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc--------------------hhh-------hhccCC--CeEEeccc
Confidence 488999 58999999999999995 577766321 111 111133 34445555
Q ss_pred CcchhhhcCCCcEEEEcCCC--------HHHHHHHHHHHHHcCC
Q psy9587 197 DEISEEFVHGFDVVIATSCN--------PNQLIKIDDFCRSKSK 232 (236)
Q Consensus 197 ~~~~~~~l~~~DlVI~~~d~--------~~~r~~In~~c~~~~i 232 (236)
.+...+.+.++|+||.|... ...-..+-+.|++.+.
T Consensus 52 ~d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~ 95 (221)
T 3ew7_A 52 FDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVS 95 (221)
T ss_dssp GGCCHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCS
T ss_pred cChhhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCC
Confidence 44333667889999988643 2344566667776643
No 106
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.80 E-value=0.041 Score=47.06 Aligned_cols=96 Identities=14% Similarity=0.047 Sum_probs=59.7
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|+|+ |.+|+.+++.|+..|. ++++++.+.-. ....|++.+. .+. .+. ++....+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---------------~~~~~~~~~~-~~~--~~~--~~~~~~D 63 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVV---------------SNIDKVQMLL-YFK--QLG--AKLIEAS 63 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCS---------------SCHHHHHHHH-HHH--TTT--CEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcc---------------cchhHHHHHH-HHH--hCC--eEEEeCC
Confidence 46899995 9999999999999995 46665532100 0011222221 121 233 4455666
Q ss_pred CCcch--hhhcCCCcEEEEcCC------CHHHHHHHHHHHHHcC-Cc
Q psy9587 196 VDEIS--EEFVHGFDVVIATSC------NPNQLIKIDDFCRSKS-KI 233 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d------~~~~r~~In~~c~~~~-ip 233 (236)
+.+.. .+.++++|+||.+.. +......+-+.|++.+ ++
T Consensus 64 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 64 LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp SSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred CCCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 65532 456789999998864 3445567778888887 54
No 107
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=95.80 E-value=0.038 Score=49.98 Aligned_cols=76 Identities=11% Similarity=0.071 Sum_probs=50.3
Q ss_pred ccceEEEEcCChhHHHHHHHHHH-hCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIIL-SGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~-~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
...+|+|||+|+.|..++..|.. .++.+++++|.+. .|++.+++.+... +.+.+....
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~--------------------~~a~~la~~~~~~-~g~~~~~~~ 186 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDP--------------------LATAKLIANLKEY-SGLTIRRAS 186 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSH--------------------HHHHHHHHHHTTC-TTCEEEECS
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCH--------------------HHHHHHHHHHHhc-cCceEEEeC
Confidence 34689999999999999999864 4788898887321 2555566555432 233333221
Q ss_pred cCCCcchhhhcCCCcEEEEcCCC
Q psy9587 194 TKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
...+.+.++|+||.|+.+
T Consensus 187 -----~~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 -----SVAEAVKGVDIITTVTAD 204 (350)
T ss_dssp -----SHHHHHTTCSEEEECCCC
T ss_pred -----CHHHHHhcCCEEEEeccC
Confidence 123556778888888764
No 108
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.79 E-value=0.07 Score=45.42 Aligned_cols=98 Identities=14% Similarity=0.089 Sum_probs=60.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCC-hHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGK-NRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk-~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.+|+|+|+ |.+|+.+++.|+..|. ++++++.+.- .- . .. .|++.+ +.+.. +. ++....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~---~~--~---------~~~~~~~~~-~~l~~--~~--v~~v~~ 62 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTI---TA--A---------NPETKEELI-DNYQS--LG--VILLEG 62 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSC---CS--S---------CHHHHHHHH-HHHHH--TT--CEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCc---cc--C---------ChHHHHHHH-HHHHh--CC--CEEEEe
Confidence 46899996 8999999999999995 4666553320 00 0 00 233322 22222 33 344556
Q ss_pred CCCcch--hhhcCCCcEEEEcCCC--HHHHHHHHHHHHHcC-CcE
Q psy9587 195 KVDEIS--EEFVHGFDVVIATSCN--PNQLIKIDDFCRSKS-KIS 234 (236)
Q Consensus 195 ~l~~~~--~~~l~~~DlVI~~~d~--~~~r~~In~~c~~~~-ip~ 234 (236)
++.+.. ...++++|+||.+... ......+-+.|++.+ ++-
T Consensus 63 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 107 (307)
T 2gas_A 63 DINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKK 107 (307)
T ss_dssp CTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSE
T ss_pred CCCCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceE
Confidence 665432 4567899999998753 444556777888877 543
No 109
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.78 E-value=0.024 Score=49.16 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=29.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|.|||+|.+|+.++.+|+..|. +++++|.+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCH
Confidence 468999999999999999999997 688888654
No 110
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.78 E-value=0.056 Score=51.17 Aligned_cols=84 Identities=13% Similarity=-0.012 Sum_probs=63.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|+|+|.+|..+++.|...|.. ++++|.|.-....+ . ..+.++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~-v~vid~d~~~~~~~-~-------------------------------~~i~gD~ 395 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVP-FILIDRQESPVCND-H-------------------------------VVVYGDA 395 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCCSSCCS-S-------------------------------CEEESCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-EEEEECChHHHhhc-C-------------------------------CEEEeCC
Confidence 6799999999999999999999987 88999775322111 0 2333333
Q ss_pred Ccc---hhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCc
Q psy9587 197 DEI---SEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 197 ~~~---~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip 233 (236)
++. ...-++++|.+|.++++.+....+.-.|++.+.+
T Consensus 396 t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 396 TVGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp SSSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CCHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 332 2445789999999999999999999999998864
No 111
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=95.76 E-value=0.013 Score=49.61 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=29.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC---ceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV---KSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV---g~I~LvD~D 149 (236)
.+|.|||+|.+|+.++..|+..|. ..++++|.+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 368999999999999999999995 578998865
No 112
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.74 E-value=0.072 Score=45.09 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=52.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.+..+..++..+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 69 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSS--------------------EGLEASKAAVLETAPDAEVLTT 69 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHHCTTCCEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCH--------------------HHHHHHHHHHHhhcCCceEEEE
Confidence 4557888998 569999999999999975 66666321 2344455666666555566666
Q ss_pred ecCCCcch--hhh-------cCCCcEEEEcC
Q psy9587 193 ETKVDEIS--EEF-------VHGFDVVIATS 214 (236)
Q Consensus 193 ~~~l~~~~--~~~-------l~~~DlVI~~~ 214 (236)
..++++.. ..+ +...|++|.+.
T Consensus 70 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA 100 (267)
T 1iy8_A 70 VADVSDEAQVEAYVTATTERFGRIDGFFNNA 100 (267)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 66665422 122 33678888775
No 113
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.73 E-value=0.054 Score=46.80 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=53.6
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
+|+|.| .|.+|+.+++.|+..|. +++++|.+.-...++ . . + .++.+..++
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l-~-----------------------~--~--~~~~~~~Dl 65 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRL-A-----------------------Y--L--EPECRVAEM 65 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGG-G-----------------------G--G--CCEEEECCT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhh-c-----------------------c--C--CeEEEEecC
Confidence 689999 58999999999999995 577777543211111 0 0 1 234445555
Q ss_pred Ccch--hhhcCCCcEEEEcCCC---------------HHHHHHHHHHHHHcCC-cEE
Q psy9587 197 DEIS--EEFVHGFDVVIATSCN---------------PNQLIKIDDFCRSKSK-ISL 235 (236)
Q Consensus 197 ~~~~--~~~l~~~DlVI~~~d~---------------~~~r~~In~~c~~~~i-p~I 235 (236)
.+.. .+.++++|+||.+... ...-..+-+.|.+.++ .+|
T Consensus 66 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v 122 (342)
T 2x4g_A 66 LDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRIL 122 (342)
T ss_dssp TCHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEE
T ss_pred CCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 5432 4566788999887642 1223456667777664 444
No 114
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.73 E-value=0.069 Score=47.05 Aligned_cols=32 Identities=22% Similarity=0.161 Sum_probs=27.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D 149 (236)
+|+|||+|.+|+.++..|+..|. .+++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 58899999999999999999764 469999865
No 115
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.72 E-value=0.02 Score=50.10 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=28.0
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+||| +|.+|+.++..|...|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 4689999 99999999999999997 58888754
No 116
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.71 E-value=0.038 Score=46.87 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=26.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.+|+|.|+|.+|+.+++.|...|.. ++.++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~-V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHE-VTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4689999999999999999999974 666654
No 117
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.69 E-value=0.053 Score=45.78 Aligned_cols=81 Identities=12% Similarity=0.137 Sum_probs=52.6
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCC-ceEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPN-VEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~-v~I~~ 191 (236)
++.++++|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+.+++.+.+.++. .++..
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 63 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSK--------------------QNLEKVHDEIMRSNKHVQEPIV 63 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCH--------------------HHHHHHHHHHHHHCTTSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCH--------------------HHHHHHHHHHHHhccccCcceE
Confidence 35578899995 6999999999999998 477766321 2455566666666544 45556
Q ss_pred EecCCCcch--h-------hhcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~-------~~l~~~DlVI~~~d 215 (236)
+..++++.. . +.+...|++|.+..
T Consensus 64 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 64 LPLDITDCTKADTEIKDIHQKYGAVDILVNAAA 96 (250)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_pred EeccCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 665655421 1 12245777777653
No 118
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.69 E-value=0.014 Score=50.60 Aligned_cols=106 Identities=7% Similarity=0.017 Sum_probs=61.9
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
++. +|+|+|+|+.|..++..|+..|+.+|+++|.+.-....+ ...+- ... .+.+.+.+. ..++-|.+.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l-a~~~~--~~~-----~~~~~~~~~--~aDiVInatp 175 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKAL-DFPVK--IFS-----LDQLDEVVK--KAKSLFNTTS 175 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC-CSSCE--EEE-----GGGHHHHHH--TCSEEEECSS
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHHcc--cCC-----HHHHHhhhc--CCCEEEECCC
Confidence 355 899999999999999999999999999999876444455 33211 000 011122222 1233333222
Q ss_pred cCCC----cchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCc
Q psy9587 194 TKVD----EISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 194 ~~l~----~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip 233 (236)
.... ....+.+..-.+|+|...+ ...+-+.+++.|++
T Consensus 176 ~gm~p~~~~i~~~~l~~~~~V~Divy~---~T~ll~~A~~~G~~ 216 (253)
T 3u62_A 176 VGMKGEELPVSDDSLKNLSLVYDVIYF---DTPLVVKARKLGVK 216 (253)
T ss_dssp TTTTSCCCSCCHHHHTTCSEEEECSSS---CCHHHHHHHHHTCS
T ss_pred CCCCCCCCCCCHHHhCcCCEEEEeeCC---CcHHHHHHHHCCCc
Confidence 1111 1123456666788888777 23445566666665
No 119
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.69 E-value=0.014 Score=51.29 Aligned_cols=34 Identities=12% Similarity=-0.019 Sum_probs=30.6
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.++|+|+|+||.|..++..|+..| .+|++++.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 578999999999999999999999 8999987553
No 120
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.65 E-value=0.08 Score=43.87 Aligned_cols=90 Identities=9% Similarity=-0.018 Sum_probs=57.4
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
-++|+|.| .|++|..+++.|+..|--++++++.+.-....+ .. -.++.+..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~----------------------~~~~~~~~ 74 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YP----------------------TNSQIIMG 74 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CC----------------------TTEEEEEC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------cc----------------------CCcEEEEe
Confidence 35789999 689999999999999944677777543221111 00 13455666
Q ss_pred CCCcch--hhhcCCCcEEEEcCCCHH---HHHHHHHHHHHcCCc
Q psy9587 195 KVDEIS--EEFVHGFDVVIATSCNPN---QLIKIDDFCRSKSKI 233 (236)
Q Consensus 195 ~l~~~~--~~~l~~~DlVI~~~d~~~---~r~~In~~c~~~~ip 233 (236)
++.+.. ...++++|+||.+..... ....+-+.|++.++.
T Consensus 75 Dl~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~ 118 (236)
T 3qvo_A 75 DVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVK 118 (236)
T ss_dssp CTTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCC
T ss_pred cCCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCC
Confidence 665432 456788999997765322 223455667776654
No 121
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.64 E-value=0.042 Score=47.79 Aligned_cols=36 Identities=17% Similarity=0.071 Sum_probs=26.0
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+.+..+|+|.|+ |.+|+.+++.|+..|.. ++++|..
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRT-VRGFDLR 52 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCE-EEEEeCC
Confidence 345678999996 89999999999999964 6666643
No 122
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.64 E-value=0.078 Score=44.99 Aligned_cols=81 Identities=12% Similarity=0.110 Sum_probs=58.5
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+ ..+.+.+++.+.+.++...+..+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~--------------------~~~~~~~~~~l~~~~~~~~~~~~ 66 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGAN-VLINGRR--------------------EENVNETIKEIRAQYPDAILQPV 66 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESS--------------------HHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCC--------------------HHHHHHHHHHHHhhCCCceEEEE
Confidence 46678899995 69999999999999975 6666632 12455667778888877788777
Q ss_pred ecCCCcch-----hhhcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS-----EEFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~-----~~~l~~~DlVI~~~d 215 (236)
..++++.. .+.+...|++|.+..
T Consensus 67 ~~D~~~~~~~~~~~~~~g~id~lv~nAg 94 (267)
T 3t4x_A 67 VADLGTEQGCQDVIEKYPKVDILINNLG 94 (267)
T ss_dssp ECCTTSHHHHHHHHHHCCCCSEEEECCC
T ss_pred ecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 77776532 223457899998754
No 123
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.61 E-value=0.086 Score=44.81 Aligned_cols=81 Identities=14% Similarity=0.166 Sum_probs=52.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.+. .+.+.+++.+.+......+..+
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTV--------------------GNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHTTCSSEEEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCh--------------------HHHHHHHHHHHhcCCCceEEEE
Confidence 4557889998 579999999999999975 66665321 2344455566655444466666
Q ss_pred ecCCCcch--hhh-------cCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--EEF-------VHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~~~-------l~~~DlVI~~~d 215 (236)
..++.+.. ..+ +...|+||.+..
T Consensus 89 ~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 89 RCDLSNEEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred EecCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 66665422 122 237888887753
No 124
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.61 E-value=0.041 Score=44.92 Aligned_cols=90 Identities=11% Similarity=0.103 Sum_probs=57.3
Q ss_pred ceEEEEc-CChhHHHHHHHHH-HhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGP-LTRVGAEIAKNII-LSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La-~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
++|+|.| .|++|..+++.|+ ..|. ++++++.+.-+ .+ + .+....+ .+..+..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~--~~-----------------~----~~~~~~~--~~~~~~~ 59 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT--RI-----------------P----PEIIDHE--RVTVIEG 59 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH--HS-----------------C----HHHHTST--TEEEEEC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc--cc-----------------h----hhccCCC--ceEEEEC
Confidence 4589999 5899999999999 8887 57776643210 11 0 0111222 4556666
Q ss_pred CCCcch--hhhcCCCcEEEEcCCC--HHHHHHHHHHHHHcCCc
Q psy9587 195 KVDEIS--EEFVHGFDVVIATSCN--PNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 195 ~l~~~~--~~~l~~~DlVI~~~d~--~~~r~~In~~c~~~~ip 233 (236)
++.+.. .+.++++|+||.+... .. ...+-+.|++.+.+
T Consensus 60 D~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~~~ 101 (221)
T 3r6d_A 60 SFQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXNIR 101 (221)
T ss_dssp CTTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcCCC
Confidence 666532 4567899999988753 44 45555666776653
No 125
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.58 E-value=0.014 Score=49.94 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=27.0
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|||+|.+|+.+++.|...|. +++++|.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 58899999999999999999997 58887743
No 126
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.57 E-value=0.028 Score=49.42 Aligned_cols=32 Identities=28% Similarity=0.257 Sum_probs=28.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 478999999999999999999996 48888754
No 127
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.56 E-value=0.053 Score=47.31 Aligned_cols=92 Identities=20% Similarity=0.308 Sum_probs=55.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHh-CCceEEEeeCCcc--cccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILS-GVKSVCLLDSGVV--TKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~-GVg~I~LvD~D~V--e~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
-+|+|+|| |.+|..+++.+... |+.-..++|.+.- .-.++ ... .|..+ ..+.+
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~-~~~-------~g~~~------------~~v~~--- 62 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDA-GEL-------AGAGK------------TGVTV--- 62 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCT-TCS-------SSSSC------------CSCCE---
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhH-HHH-------cCCCc------------CCcee---
Confidence 47899999 99999999998753 4332336664321 11122 110 01100 01121
Q ss_pred ecCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
...+ .+.+.++|+||+++ ++..-..+-+.|.++|+++|+
T Consensus 63 ~~dl----~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVi 101 (273)
T 1dih_A 63 QSSL----DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVI 101 (273)
T ss_dssp ESCS----TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCH----HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEE
Confidence 1112 24456899999998 455667888899999999874
No 128
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.55 E-value=0.0096 Score=51.49 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=29.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCccc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVT 152 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve 152 (236)
.+|.|||+|.+|+.++.+|+..|. +++++|.+.-.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~ 36 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEK 36 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHH
Confidence 368999999999999999999996 58888876533
No 129
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.55 E-value=0.088 Score=49.18 Aligned_cols=93 Identities=18% Similarity=0.100 Sum_probs=67.9
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
..++|+|+|.|-+|..+|+.|-. + .++++++.|. .|++.++ +..|.+. +.++
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~d~--------------------~r~~~la----~~l~~~~--Vi~G 285 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIERNL--------------------QRAEKLS----EELENTI--VFCG 285 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-T-SEEEEEESCH--------------------HHHHHHH----HHCTTSE--EEES
T ss_pred cccEEEEEcchHHHHHHHHHhhh-c-CceEEEecCH--------------------HHHHHHH----HHCCCce--EEec
Confidence 45689999999999999999853 3 4677777443 2344444 4445543 4455
Q ss_pred CCCcch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 195 KVDEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 195 ~l~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
+.++.. ++-+.++|++|.++++.+......-+|+++|++-+
T Consensus 286 D~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kv 329 (461)
T 4g65_A 286 DAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKV 329 (461)
T ss_dssp CTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEE
T ss_pred cccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccc
Confidence 544432 55678999999999999999999999999998643
No 130
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.52 E-value=0.059 Score=45.42 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=51.0
Q ss_pred cccceEEEEcC-C-hhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 114 YKIYVYSTGPL-T-RVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG~-G-gvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
++.++|+|.|+ | |+|.++++.|+..|.. +.++|.+. .+.+.+.+.+.+.. ..++..
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~-~~~~~~ 77 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYHE--------------------RRLGETRDQLADLG-LGRVEA 77 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHTTC-SSCEEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCCH--------------------HHHHHHHHHHHhcC-CCceEE
Confidence 46678999998 7 8999999999999976 66766331 23444455554443 235666
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
+..++++.. .. .+...|++|.+..
T Consensus 78 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 666665421 11 1235677776653
No 131
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=95.48 E-value=0.11 Score=43.40 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=52.0
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|..++.++|.+.- + ...+.+.+..+..++..+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~--------------------~--~~~~~l~~~~~~~~~~~~ 60 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN--------------------P--TALAELKAINPKVNITFH 60 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC--------------------H--HHHHHHHHHCTTSEEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch--------------------H--HHHHHHHHhCCCceEEEE
Confidence 3456788888 5799999999999999877777763210 0 122344555555567777
Q ss_pred ecCCCcc-h--hhh-------cCCCcEEEEcCC
Q psy9587 193 ETKVDEI-S--EEF-------VHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~-~--~~~-------l~~~DlVI~~~d 215 (236)
..++++. . .++ +...|+||.+..
T Consensus 61 ~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 93 (254)
T 1sby_A 61 TYDVTVPVAESKKLLKKIFDQLKTVDILINGAG 93 (254)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEecCCChHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 6666543 2 122 247899887753
No 132
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.47 E-value=0.092 Score=44.51 Aligned_cols=81 Identities=10% Similarity=0.114 Sum_probs=55.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+.+.+.+.++..++..+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~~~~~~~~~ 64 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCARDG--------------------ERLRAAESALRQRFPGARLFAS 64 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHHSTTCCEEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCH--------------------HHHHHHHHHHHHhcCCceEEEE
Confidence 4567889998 569999999999999986 77766321 2455566667766666667777
Q ss_pred ecCCCcch--h-------hhcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~-------~~l~~~DlVI~~~d 215 (236)
..++++.. . +.+...|++|.+..
T Consensus 65 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 65 VCDVLDALQVRAFAEACERTLGCASILVNNAG 96 (265)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCSCSEEEECCC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 66665422 1 12346788887653
No 133
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.43 E-value=0.021 Score=48.28 Aligned_cols=89 Identities=9% Similarity=0.084 Sum_probs=55.4
Q ss_pred eEEEEcC-ChhHHHHHHHHHHh--CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILS--GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~--GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
+|+|.|+ |.+|+.+++.|+.. |. ++++++.+. +.. .. +.. +. ++.+..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~---~~~-----------------~~----l~~--~~--~~~~~~ 52 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNV---EKA-----------------ST----LAD--QG--VEVRHG 52 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCT---TTT-----------------HH----HHH--TT--CEEEEC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCH---HHH-----------------hH----Hhh--cC--CeEEEe
Confidence 5788996 89999999999988 74 477766421 111 11 111 22 344455
Q ss_pred CCCcch--hhhcCCCcEEEEcCC-------CHHHHHHHHHHHHHcCC-cEE
Q psy9587 195 KVDEIS--EEFVHGFDVVIATSC-------NPNQLIKIDDFCRSKSK-ISL 235 (236)
Q Consensus 195 ~l~~~~--~~~l~~~DlVI~~~d-------~~~~r~~In~~c~~~~i-p~I 235 (236)
++.+.. .+.++++|+||.+.. +...-..+-+.|++.++ .+|
T Consensus 53 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v 103 (287)
T 2jl1_A 53 DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIA 103 (287)
T ss_dssp CTTCHHHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCHHHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 555432 456778999988764 33445566778887776 444
No 134
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=95.41 E-value=0.028 Score=49.66 Aligned_cols=36 Identities=8% Similarity=-0.151 Sum_probs=31.6
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCc
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~ 150 (236)
...+|+|||+|..|..++.+|... |+.+++++|.+.
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~ 170 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTK 170 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSH
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCH
Confidence 446899999999999999999988 888999998654
No 135
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.41 E-value=0.025 Score=47.89 Aligned_cols=32 Identities=9% Similarity=0.090 Sum_probs=27.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|||+|.+|..++..|...| ..+.++|.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECCC
Confidence 36899999999999999999988 468888754
No 136
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.40 E-value=0.021 Score=50.49 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=30.1
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+..+|+|||+|.+|+.++.+|+..|. .++++|.+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCH
Confidence 34589999999999999999999997 488888664
No 137
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.40 E-value=0.05 Score=47.92 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=27.1
Q ss_pred cceEEEEcCChhHHHHHHHHHHhC-CceEEEeeCCcc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSG-VKSVCLLDSGVV 151 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~G-Vg~I~LvD~D~V 151 (236)
..+|+|||+|.+|...+..|...+ +.-+.++|.+.-
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~ 41 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLE 41 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSS
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHH
Confidence 357899999999999999998774 333446676543
No 138
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.38 E-value=0.097 Score=45.70 Aligned_cols=83 Identities=10% Similarity=0.111 Sum_probs=50.1
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+..+|+|.|+ |.+|+.+++.|+..|. +++++|...-. ...+.+.+.+.+.... .-.++.+.
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~----------------~~~~~~~~~~~~~~~~-~~~~~~~~ 87 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG----------------HQRNLDEVRSLVSEKQ-WSNFKFIQ 87 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC----------------CHHHHHHHHHHSCHHH-HTTEEEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc----------------chhhHHHHhhhccccc-CCceEEEE
Confidence 4467999997 8999999999999996 47776642110 0011222222221110 12455666
Q ss_pred cCCCcch--hhhcCCCcEEEEcCC
Q psy9587 194 TKVDEIS--EEFVHGFDVVIATSC 215 (236)
Q Consensus 194 ~~l~~~~--~~~l~~~DlVI~~~d 215 (236)
.++.+.. .+.++++|+||.|..
T Consensus 88 ~Dl~d~~~~~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 88 GDIRNLDDCNNACAGVDYVLHQAA 111 (352)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCS
T ss_pred CCCCCHHHHHHHhcCCCEEEECCc
Confidence 6666532 456789999998864
No 139
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.37 E-value=0.048 Score=47.51 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|.|||+|.+|+.++.+|+..|. +++++|.+.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH
Confidence 478999999999999999999997 588888654
No 140
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.36 E-value=0.1 Score=46.02 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=60.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
++|.+||+|..|..+|++|+..|.. ++++|.+.-....+ .. .|-..++. +.+.-..+.+....-.-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~-v~v~dr~~~~~~~l-~~--------~Ga~~a~s----~~e~~~~~dvv~~~l~~ 69 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYL-LNVFDLVQSAVDGL-VA--------AGASAARS----ARDAVQGADVVISMLPA 69 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCE-EEEECSSHHHHHHH-HH--------TTCEECSS----HHHHHTTCSEEEECCSC
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCe-EEEEcCCHHHHHHH-HH--------cCCEEcCC----HHHHHhcCCceeecCCc
Confidence 4689999999999999999999975 78887543222222 10 11111111 11111223333221110
Q ss_pred Ccch----------hhhcCCCcEEEEcC-CCHHHHHHHHHHHHHcCCcEE
Q psy9587 197 DEIS----------EEFVHGFDVVIATS-CNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 197 ~~~~----------~~~l~~~DlVI~~~-d~~~~r~~In~~c~~~~ip~I 235 (236)
.+.- ...++.=++||+++ .++.....+.+.+.++|+-|+
T Consensus 70 ~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 70 SQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp HHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 0000 11223346888775 678899999999999998775
No 141
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.36 E-value=0.062 Score=46.30 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=57.6
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|+|+ |.+|+.+++.|+..|. ++++++.+.- .++..+ +.+.. +. ++....+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~~~~~~-~~l~~--~~--v~~v~~D 66 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNS-------------------SKTTLL-DEFQS--LG--AIIVKGE 66 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTC-------------------SCHHHH-HHHHH--TT--CEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCC-------------------chhhHH-HHhhc--CC--CEEEEec
Confidence 46899995 8999999999999995 4666553210 011111 11222 23 3445566
Q ss_pred CCcch--hhhcCCCcEEEEcCCC--HHHHHHHHHHHHHcC-CcE
Q psy9587 196 VDEIS--EEFVHGFDVVIATSCN--PNQLIKIDDFCRSKS-KIS 234 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d~--~~~r~~In~~c~~~~-ip~ 234 (236)
+.+.. ...++++|+||.+... ......+-+.|++.+ ++.
T Consensus 67 l~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 110 (318)
T 2r6j_A 67 LDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKR 110 (318)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCE
T ss_pred CCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCE
Confidence 65432 4567899999998753 233456667777776 543
No 142
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=95.35 E-value=0.1 Score=45.64 Aligned_cols=90 Identities=18% Similarity=0.188 Sum_probs=58.7
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||+|.++|+.|+..|. ++.++|.+.- + .+. ..-...+.+.+++.+..... ++..
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~----~-~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~ 90 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVG----L-DGS-----PASGGSAAQSVVDEITAAGG--EAVA 90 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBC----T-TSS-----BTCTTSHHHHHHHHHHHTTC--EEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCccc----c-ccc-----ccccHHHHHHHHHHHHhcCC--cEEE
Confidence 456788999995 6999999999999998 4777775531 1 111 11223466777777776643 5666
Q ss_pred EecCCCcch--hhh-------cCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EEF-------VHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~~-------l~~~DlVI~~~d 215 (236)
+..++++.. .++ +...|++|.+..
T Consensus 91 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg 123 (322)
T 3qlj_A 91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAG 123 (322)
T ss_dssp ECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666666432 222 347899997754
No 143
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=95.34 E-value=0.068 Score=45.83 Aligned_cols=28 Identities=11% Similarity=0.214 Sum_probs=22.6
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEee
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~GVg~I~LvD 147 (236)
+|+|.|+ |.+|+.+++.|+..| .+..++
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred EEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 5788994 899999999999999 444444
No 144
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.33 E-value=0.056 Score=46.54 Aligned_cols=98 Identities=11% Similarity=0.008 Sum_probs=59.2
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|+|+ |.+|+.+++.|+..|. ++++++.+.-+ - -...|++.+. .+.. +. ++....+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~-----------~~~~~~~~l~-~~~~--~~--v~~v~~D 64 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTP---D-----------STPSSVQLRE-EFRS--MG--VTIIEGE 64 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCT---T-----------CCHHHHHHHH-HHHH--TT--CEEEECC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCccc---c-----------cChHHHHHHH-Hhhc--CC--cEEEEec
Confidence 46899995 9999999999999995 57776643100 0 0001222221 1221 23 4455566
Q ss_pred CCcch--hhhcCCCcEEEEcCCC--HHHHHHHHHHHHHcC-CcE
Q psy9587 196 VDEIS--EEFVHGFDVVIATSCN--PNQLIKIDDFCRSKS-KIS 234 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d~--~~~r~~In~~c~~~~-ip~ 234 (236)
+.+.. ...++++|+||.|... ......+-+.|.+.+ ++-
T Consensus 65 ~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 108 (321)
T 3c1o_A 65 MEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKR 108 (321)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCE
T ss_pred CCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccE
Confidence 65432 4567899999998764 234456677777777 543
No 145
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=95.31 E-value=0.18 Score=42.91 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=53.3
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|. ++.++|.+.-....+ .. ..+.+++.+.... .++..+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~-~~------------~~~~~~~~~~~~~--~~~~~~ 67 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKL-PG------------TIHSAAAAVNAAG--GQGLAL 67 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTS-CC------------CHHHHHHHHHHHT--SEEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhh-HH------------HHHHHHHHHHhcC--CeEEEE
Confidence 4667889999 45999999999999998 588888654332222 11 1333444555543 355566
Q ss_pred ecCCCcch--h-------hhcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~-------~~l~~~DlVI~~~d 215 (236)
..++++.. . +.+...|++|.+..
T Consensus 68 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG 99 (274)
T 3e03_A 68 KCDIREEDQVRAAVAATVDTFGGIDILVNNAS 99 (274)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 66665421 1 12346788887653
No 146
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.31 E-value=0.11 Score=45.96 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=48.7
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccc-cCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTK-EDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~-sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
++..+|+|.|+ |.+|+.+++.|+..|..+++++|...-.. .++ . ..-.++.
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l-~--------------------------~~~~v~~ 82 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV-P--------------------------DHPAVRF 82 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGS-C--------------------------CCTTEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhc-c--------------------------CCCceEE
Confidence 34467999995 89999999999999955677776532111 111 0 0124555
Q ss_pred EecCCCcch--hhhcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EEFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~~l~~~DlVI~~~d 215 (236)
+..++.+.. .+.++++|+||.+..
T Consensus 83 ~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 83 SETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp ECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred EECCCCCHHHHHHHhhCCCEEEECCC
Confidence 666665432 456778999998864
No 147
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.30 E-value=0.095 Score=44.70 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=25.7
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|.|+ |.+|+.+++.|+..|. +++++|..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 33 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNL 33 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 5889997 8999999999999997 46676643
No 148
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=95.29 E-value=0.085 Score=46.87 Aligned_cols=73 Identities=14% Similarity=0.057 Sum_probs=49.8
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
...+|+|||+|+.|...+..|... ++.++.++|.+ ..|++.+++.+.... +.+. ..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--------------------~~~a~~la~~~~~~~--~~~~-~~ 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR--------------------EKAAKKFVSYCEDRG--ISAS-VQ 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS--------------------HHHHHHHHHHHHHTT--CCEE-EC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC--------------------HHHHHHHHHHHHhcC--ceEE-EC
Confidence 346899999999999999999874 68888887732 235666676665432 2332 11
Q ss_pred cCCCcchhhhcCCCcEEEEcCCC
Q psy9587 194 TKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
.-.+.+ ++|+||.|+.+
T Consensus 181 -----~~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 -----PAEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp -----CHHHHT-SSSEEEECCCC
T ss_pred -----CHHHHh-CCCEEEEeeCC
Confidence 123455 78998888864
No 149
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.28 E-value=0.096 Score=46.10 Aligned_cols=73 Identities=25% Similarity=0.241 Sum_probs=48.0
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCc-eEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhh---CCCceEEEE
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVK-SVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNL---NPNVEVTSN 192 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg-~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i---np~v~I~~~ 192 (236)
+|+|+| +|.+|+.++..|+..|.. ++.|+|- +.|- .|++..+..|... ...+++..
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di----~~~~--------------~~~~~~~~dl~~~~~~~~~~~v~~- 62 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI----PDKE--------------DDTVGQAADTNHGIAYDSNTRVRQ- 62 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC----GGGH--------------HHHHHHHHHHHHHHTTTCCCEEEE-
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC----CCCh--------------hhHHHHHHHHHHHHhhCCCcEEEe-
Confidence 589999 999999999999988864 5888884 1111 1222223344443 44556654
Q ss_pred ecCCCcchhhhcCCCcEEEEcCC
Q psy9587 193 ETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
. ..+.++++|+||.+..
T Consensus 63 -~-----~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 63 -G-----GYEDTAGSDVVVITAG 79 (303)
T ss_dssp -C-----CGGGGTTCSEEEECCC
T ss_pred -C-----CHHHhCCCCEEEEcCC
Confidence 1 1345789999998864
No 150
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.28 E-value=0.061 Score=49.78 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=58.1
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
++.++|+|+|.|+.|..+|+.|...|.. +++.|....+.. ...+.|.+. .+++. .
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~-V~~~D~~~~~~~--------------------~~~~~L~~~--gi~~~--~ 61 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAI-VTVNDGKPFDEN--------------------PTAQSLLEE--GIKVV--C 61 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCE-EEEEESSCGGGC--------------------HHHHHHHHT--TCEEE--E
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCE-EEEEeCCcccCC--------------------hHHHHHHhC--CCEEE--E
Confidence 3557899999999999999999999966 888885431100 123455554 34443 2
Q ss_pred cCCCcchhhhcCC-CcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEISEEFVHG-FDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~~~~l~~-~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
+.- ..+.+.+ +|+||.+..-+...-. -..+++.|+|++
T Consensus 62 g~~---~~~~~~~~~d~vv~spgi~~~~p~-~~~a~~~gi~v~ 100 (451)
T 3lk7_A 62 GSH---PLELLDEDFCYMIKNPGIPYNNPM-VKKALEKQIPVL 100 (451)
T ss_dssp SCC---CGGGGGSCEEEEEECTTSCTTSHH-HHHHHHTTCCEE
T ss_pred CCC---hHHhhcCCCCEEEECCcCCCCChh-HHHHHHCCCcEE
Confidence 211 1234566 9999987642222222 345678888876
No 151
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.26 E-value=0.062 Score=45.38 Aligned_cols=81 Identities=6% Similarity=-0.003 Sum_probs=52.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|.|+|.+|+.+++.|...|.. ++.++.+.- +... +.. + .++.+..++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~-V~~~~r~~~--------------------~~~~----~~~--~--~~~~~~~D~ 56 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWR-IIGTSRNPD--------------------QMEA----IRA--S--GAEPLLWPG 56 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCE-EEEEESCGG--------------------GHHH----HHH--T--TEEEEESSS
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCE-EEEEEcChh--------------------hhhh----Hhh--C--CCeEEEecc
Confidence 4789999999999999999999864 666553211 1111 111 1 355555665
Q ss_pred CcchhhhcCCCcEEEEcCCC----HHHHHHHHHHHHH
Q psy9587 197 DEISEEFVHGFDVVIATSCN----PNQLIKIDDFCRS 229 (236)
Q Consensus 197 ~~~~~~~l~~~DlVI~~~d~----~~~r~~In~~c~~ 229 (236)
.+. + +.++|+||.|... ......+.+.|++
T Consensus 57 ~d~--~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 57 EEP--S-LDGVTHLLISTAPDSGGDPVLAALGDQIAA 90 (286)
T ss_dssp SCC--C-CTTCCEEEECCCCBTTBCHHHHHHHHHHHH
T ss_pred ccc--c-cCCCCEEEECCCccccccHHHHHHHHHHHh
Confidence 542 2 7899999988742 2334556667776
No 152
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=95.25 E-value=0.16 Score=43.55 Aligned_cols=86 Identities=10% Similarity=0.143 Sum_probs=56.1
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.|+ ||+|.++++.|+..|. ++.++|.+.-....+ . .+.+.+++.+..... ++..+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~-~------------~~~~~~~~~~~~~~~--~~~~~ 70 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKL-P------------GTIYTAAKEIEEAGG--QALPI 70 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSS-C------------CCHHHHHHHHHHHTS--EEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhh-h------------HHHHHHHHHHHhcCC--cEEEE
Confidence 45678899995 6999999999999998 588888664333333 1 124445666666643 56666
Q ss_pred ecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
..++++.. .. .+...|++|.+..
T Consensus 71 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 71 VGDIRDGDAVAAAVAKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 66665422 12 2347898887753
No 153
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.25 E-value=0.13 Score=44.79 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=26.8
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+..+|+|.|+ |.+|+.+++.|+..|. +++++|.
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 59 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN 59 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567899996 8999999999999996 4777664
No 154
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.24 E-value=0.1 Score=46.35 Aligned_cols=32 Identities=19% Similarity=0.070 Sum_probs=27.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|.|+ |.+|+.+++.|+..|. +++++|.+
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 57899996 8999999999999995 57777754
No 155
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.23 E-value=0.059 Score=45.94 Aligned_cols=30 Identities=10% Similarity=0.031 Sum_probs=25.7
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|||+|.+|+.++..|+. |. +++++|.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCC
Confidence 58899999999999999999 87 47887743
No 156
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.21 E-value=0.19 Score=44.00 Aligned_cols=105 Identities=13% Similarity=0.057 Sum_probs=60.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|.+||+|-.|..+|++|+..|.. ++++|.+.-....+ .. .|-.- ++.+.+.-..+.+....-.-
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~-V~v~dr~~~~~~~l-~~--------~G~~~----~~s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYE-LVVWNRTASKAEPL-TK--------LGATV----VENAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCE-EEEC-------CTT-TT--------TTCEE----CSSGGGGCCTTCEEEECCSS
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHH-HH--------cCCeE----eCCHHHHHhcCCceeeeccc
Confidence 4699999999999999999999985 78888654333333 11 11111 11122222233333322110
Q ss_pred C--------cchhhhcCCCcEEEEcC-CCHHHHHHHHHHHHHcCCcEE
Q psy9587 197 D--------EISEEFVHGFDVVIATS-CNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 197 ~--------~~~~~~l~~~DlVI~~~-d~~~~r~~In~~c~~~~ip~I 235 (236)
. ......+..-++||++. .++.....+.+.+.++|+-|+
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~l 119 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYV 119 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCcee
Confidence 0 11122345567888775 678888899999999988775
No 157
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=95.20 E-value=0.14 Score=43.04 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=27.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGAR-LLLFSR 39 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeC
Confidence 3456788998 569999999999999974 777663
No 158
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.19 E-value=0.063 Score=47.65 Aligned_cols=33 Identities=6% Similarity=-0.051 Sum_probs=26.0
Q ss_pred cceEEEEcCChhHHHHHHHHHHh--CCceEEEeeC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILS--GVKSVCLLDS 148 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~--GVg~I~LvD~ 148 (236)
..+|+|||+|.+|...+..|... |+.-+.++|.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~ 47 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI 47 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 36799999999999999999987 4444446663
No 159
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.17 E-value=0.018 Score=49.53 Aligned_cols=33 Identities=15% Similarity=0.092 Sum_probs=27.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCc-eEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVK-SVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg-~I~LvD~D 149 (236)
.+|+|||+|.+|+.++..|+..|.+ ++.++|.+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 4789999999999999999999743 57777743
No 160
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.14 E-value=0.085 Score=47.00 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=49.2
Q ss_pred eEEEEc-CChhHHHHHHHHHHh-CC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILS-GV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~-GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
+|.|+| +|.||..++..|+.. +. .+|+|+|-+. |++..+..|......+++..+..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~---------------------~~~G~a~Dl~~~~~~~~v~~~~~ 60 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP---------------------VTPGVAVDLSHIPTAVKIKGFSG 60 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST---------------------THHHHHHHHHTSCSSEEEEEECS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC---------------------CchhHHHHhhCCCCCceEEEecC
Confidence 588999 899999999999876 54 5799988432 11223344555433455655422
Q ss_pred CCCcchhhhcCCCcEEEEcCC
Q psy9587 195 KVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 195 ~l~~~~~~~l~~~DlVI~~~d 215 (236)
....+-++++|+||.+..
T Consensus 61 ---~~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 61 ---EDATPALEGADVVLISAG 78 (312)
T ss_dssp ---SCCHHHHTTCSEEEECCS
T ss_pred ---CCcHHHhCCCCEEEEeCC
Confidence 123456799999998864
No 161
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.13 E-value=0.08 Score=46.34 Aligned_cols=92 Identities=14% Similarity=0.088 Sum_probs=50.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.+|+|+| +|.+|..+++.+... ++.-+.++|...- .. ...|+|. +..+.+.+.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~---~~-------~G~d~ge---------l~g~~~gv~v----- 63 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGS---PQ-------LGQDAGA---------FLGKQTGVAL----- 63 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTC---TT-------TTSBTTT---------TTTCCCSCBC-----
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCc---cc-------ccccHHH---------HhCCCCCcee-----
Confidence 5789999 899999999998864 3333344564321 00 0112221 0011111111
Q ss_pred CCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 195 KVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 195 ~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
...-.+.+.++|+||+++. +..-...-+.|.++|+|+|
T Consensus 64 --~~dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vV 101 (272)
T 4f3y_A 64 --TDDIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLV 101 (272)
T ss_dssp --BCCHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEE
T ss_pred --cCCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEE
Confidence 1112344556788888873 4445566677778888776
No 162
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.11 E-value=0.11 Score=44.94 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=25.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.+|+|.| .|++|..+++.|+..|.. ++++|.
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r 37 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYD-VVIADN 37 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEECC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCc-EEEEec
Confidence 5789998 589999999999999975 666653
No 163
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.10 E-value=0.039 Score=49.86 Aligned_cols=36 Identities=22% Similarity=0.116 Sum_probs=31.2
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+..++|+|||+|.+|..+|+.|...|+ ++..+|..
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 203 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRS 203 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 5678899999999999999999999998 47777754
No 164
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.09 E-value=0.02 Score=50.63 Aligned_cols=87 Identities=16% Similarity=0.028 Sum_probs=61.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
..+|+|+|+|.+|..+++.|...|. ++++|.|.- +++ +++ .. +....++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~~--------------------~~~-----~~~--~~--~~~i~gd 163 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENV--------------------RKK-----VLR--SG--ANFVHGD 163 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGGG--------------------HHH-----HHH--TT--CEEEESC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCChh--------------------hhh-----HHh--CC--cEEEEeC
Confidence 3479999999999999999999887 888885531 122 111 12 3345555
Q ss_pred CCcch---hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCc
Q psy9587 196 VDEIS---EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 196 l~~~~---~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip 233 (236)
.++.. ..-++++|.||.++++.+....+...+++.+.+
T Consensus 164 ~~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~ 204 (336)
T 1lnq_A 164 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 204 (336)
T ss_dssp TTSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCTT
T ss_pred CCCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCCC
Confidence 44322 233678999999999888888888888887653
No 165
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.07 E-value=0.038 Score=50.09 Aligned_cols=110 Identities=19% Similarity=0.193 Sum_probs=64.0
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhh-CCCceEEEEec
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNL-NPNVEVTSNET 194 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i-np~v~I~~~~~ 194 (236)
..+|.|||+|.+|..++.+|+..|. .++++|.+.-....+ ... |-.-+....+.+... .|++-+...+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l-~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQAL-ERE--------GIAGARSIEEFCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH-HTT--------TCBCCSSHHHHHHHSCSSCEEEECSCG
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHH-HHC--------CCEEeCCHHHHHhcCCCCCEEEEeCCH
Confidence 3579999999999999999999995 588888764333333 111 000011122222221 23444444443
Q ss_pred CCCcc----hhhhcCCCcEEEEcCC-CHHHHHHHHHHHHHcCCcEE
Q psy9587 195 KVDEI----SEEFVHGFDVVIATSC-NPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 195 ~l~~~----~~~~l~~~DlVI~~~d-~~~~r~~In~~c~~~~ip~I 235 (236)
..... -...++.-++||++.. .+.....+.+.+...++.|+
T Consensus 92 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 92 AVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp GGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence 31111 1223555678888864 45666777778888887664
No 166
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.05 E-value=0.098 Score=44.55 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=28.2
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+..+|+|.|+ |.+|+.+++.|+..|. +++.+|...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 3468999997 8999999999999996 477776544
No 167
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.03 E-value=0.077 Score=44.82 Aligned_cols=29 Identities=17% Similarity=0.046 Sum_probs=25.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEee
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD 147 (236)
+|.|||+|.+|+.++..|+..|. +++++|
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECC
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeC
Confidence 58899999999999999999997 466654
No 168
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.02 E-value=0.11 Score=45.89 Aligned_cols=87 Identities=16% Similarity=0.127 Sum_probs=50.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|||+|.+|...+..|... |+.-+.++|.+. .+++.+++ ... +. .+.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~--------------------~~~~~~a~----~~g-~~--~~~-- 55 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFI--------------------EGAQRLAE----ANG-AE--AVA-- 55 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSH--------------------HHHHHHHH----TTT-CE--EES--
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCH--------------------HHHHHHHH----HcC-Cc--eeC--
Confidence 4789999999999999999886 443333555321 12333222 222 22 211
Q ss_pred CCcchhhhcC--CCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 196 VDEISEEFVH--GFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 196 l~~~~~~~l~--~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
.-.+++. ++|+|+.|+.+.... .+...|.+.|+++++
T Consensus 56 ---~~~~~l~~~~~D~V~i~tp~~~h~-~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 56 ---SPDEVFARDDIDGIVIGSPTSTHV-DLITRAVERGIPALC 94 (344)
T ss_dssp ---SHHHHTTCSCCCEEEECSCGGGHH-HHHHHHHHTTCCEEE
T ss_pred ---CHHHHhcCCCCCEEEEeCCchhhH-HHHHHHHHcCCcEEE
Confidence 1234454 789998888654433 334456677777663
No 169
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.00 E-value=0.051 Score=48.28 Aligned_cols=34 Identities=9% Similarity=-0.131 Sum_probs=29.8
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|...+..+|.
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 212 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 3468999999999999999999999988888774
No 170
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=94.99 E-value=0.16 Score=44.58 Aligned_cols=107 Identities=14% Similarity=0.125 Sum_probs=59.4
Q ss_pred cccceEEEEc-CChhHHHHHHHHHH--hCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIIL--SGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~--~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~ 190 (236)
++..+|+|.| .|++|+.+++.|+. .|.. ++++|...-...-. .+. ...++.. .... ...+.
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~-~~~----~~~~~~~---------~~~~-~~~~~ 71 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAK-VVVLDKFRSNTLFS-NNR----PSSLGHF---------KNLI-GFKGE 71 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSE-EEEEECCCCC------------CCCCCCG---------GGGT-TCCSE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCe-EEEEECCCcccccc-ccc----hhhhhhh---------hhcc-ccCce
Confidence 3556899997 68999999999999 6765 66666432210000 000 0111111 0111 12345
Q ss_pred EEecCCCcch--hhh-cCCCcEEEEcCCC---------------HHHHHHHHHHHHHcCCcEEC
Q psy9587 191 SNETKVDEIS--EEF-VHGFDVVIATSCN---------------PNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 191 ~~~~~l~~~~--~~~-l~~~DlVI~~~d~---------------~~~r~~In~~c~~~~ip~I~ 236 (236)
.+..++.+.. ... ..++|+||.|... ...-..+-+.|++.++++||
T Consensus 72 ~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~ 135 (362)
T 3sxp_A 72 VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIY 135 (362)
T ss_dssp EEECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 5556665432 233 5789999977641 12334566788888877664
No 171
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.99 E-value=0.21 Score=42.25 Aligned_cols=92 Identities=13% Similarity=0.063 Sum_probs=56.3
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-...+- . ..-...+.+.+...+.... .++..
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~--~~~~~ 75 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDICHDIETNE-----Y---PLATSRDLEEAGLEVEKTG--RKAYT 75 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTSC-----S---CCCCHHHHHHHHHHHHHTT--SCEEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcccccccccc-----c---chhhhHHHHHHHHHHHhcC--CceEE
Confidence 346678999995 59999999999999976 77777542111111 0 0011234555566666554 35666
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
+..++.+.. .. .+...|++|.+..
T Consensus 76 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 76 AEVDVRDRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666665432 12 2347899998754
No 172
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.98 E-value=0.028 Score=49.61 Aligned_cols=31 Identities=16% Similarity=0.063 Sum_probs=25.5
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEe
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLL 146 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~Lv 146 (236)
...+|+|||+|++|+.++..|+..|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 44679999999999999999999996 46665
No 173
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.95 E-value=0.044 Score=46.98 Aligned_cols=32 Identities=16% Similarity=0.054 Sum_probs=27.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|+|||+|.+|+.++..|+..|. +++++| +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc-CH
Confidence 368999999999999999999997 588888 54
No 174
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=94.95 E-value=0.07 Score=47.38 Aligned_cols=33 Identities=18% Similarity=-0.035 Sum_probs=25.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHh-CCceEEEeeC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~ 148 (236)
..+|+|||+|.+|...+..|... |+.-+.++|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~ 38 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR 38 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 35789999999999999999876 5444446564
No 175
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.92 E-value=0.12 Score=43.69 Aligned_cols=87 Identities=15% Similarity=0.051 Sum_probs=52.6
Q ss_pred cceEEEEcCChhHHHHHHH--HHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 116 IYVYSTGPLTRVGAEIAKN--IILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~--La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
..+|+|||+|.+|..+++. +...|+.-+.++|.|.-.. ++. ++ .+.|..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~----g~~-------i~----------------gv~V~~-- 135 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKI----GTE-------VG----------------GVPVYN-- 135 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTT----TCE-------ET----------------TEEEEE--
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHH----HhH-------hc----------------CCeeec--
Confidence 3578999999999999995 3456777788988665221 110 00 123322
Q ss_pred cCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
. +.-.++++..|+|+.|+.+.... .+.+.|.+.|+..|
T Consensus 136 --~-~dl~eli~~~D~ViIAvPs~~~~-ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 136 --L-DDLEQHVKDESVAILTVPAVAAQ-SITDRLVALGIKGI 173 (215)
T ss_dssp --G-GGHHHHCSSCCEEEECSCHHHHH-HHHHHHHHTTCCEE
T ss_pred --h-hhHHHHHHhCCEEEEecCchhHH-HHHHHHHHcCCCEE
Confidence 1 11245555559999998765544 67788888888744
No 176
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.87 E-value=0.022 Score=49.16 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=28.8
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcc
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVV 151 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~V 151 (236)
+|.|||+|.+|+.++.+|+..|. +++++|.+.-
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHH
Confidence 58999999999999999999996 5888887643
No 177
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=94.86 E-value=0.12 Score=46.18 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=25.4
Q ss_pred ccceEEEEcCChhHHHHHHHHH-H-hCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNII-L-SGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La-~-~GVg~I~LvD~ 148 (236)
+..+|+|||+|.+|...+..|. . .|+.-+.++|.
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~ 57 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI 57 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC
Confidence 4468999999999999999998 3 34444446663
No 178
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.85 E-value=0.0086 Score=50.06 Aligned_cols=32 Identities=13% Similarity=0.235 Sum_probs=26.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEE-eeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCL-LDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~L-vD~D 149 (236)
.+|+|||+|.+|+.+++.|+..|.. +++ +|.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~-V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIP-AIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE-EEEEECCC
Confidence 4789999999999999999999974 555 6644
No 179
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.85 E-value=0.069 Score=46.98 Aligned_cols=95 Identities=17% Similarity=0.100 Sum_probs=58.0
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
++..+|+|.| .|.+|+.+++.|+.. |. +++.+|...-....+ .. .+ .++.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~------~~-------------------~~--~v~~ 73 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDL------VK-------------------HE--RMHF 73 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGG------GG-------------------ST--TEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhh------cc-------------------CC--CeEE
Confidence 3456899999 689999999999998 65 577777543111111 00 11 4556
Q ss_pred EecCCC-cch--hhhcCCCcEEEEcCCC--HHH---------------HHHHHHHHHHcCCcEEC
Q psy9587 192 NETKVD-EIS--EEFVHGFDVVIATSCN--PNQ---------------LIKIDDFCRSKSKISLF 236 (236)
Q Consensus 192 ~~~~l~-~~~--~~~l~~~DlVI~~~d~--~~~---------------r~~In~~c~~~~ip~I~ 236 (236)
+..++. +.. .+.++++|+||.|... ... -..+-+.|++.+..|||
T Consensus 74 ~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~ 138 (372)
T 3slg_A 74 FEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVF 138 (372)
T ss_dssp EECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEE
T ss_pred EeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 666666 322 3456789999976532 111 13456677777766653
No 180
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.84 E-value=0.075 Score=49.55 Aligned_cols=38 Identities=18% Similarity=0.091 Sum_probs=31.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDV 156 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL 156 (236)
+|+|||+|.+|+.+|..|+..|. +++++|.+.-....+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l 41 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQL 41 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHH
Confidence 68999999999999999999997 588999775333334
No 181
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.83 E-value=0.13 Score=43.48 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=49.9
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|. ++.++|.+. .+.+.+++.+.+.. ..++..+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~--------------------~~~~~~~~~l~~~~-~~~~~~~ 65 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRST--------------------ADIDACVADLDQLG-SGKVIGV 65 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCH--------------------HHHHHHHHHHHTTS-SSCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH--------------------HHHHHHHHHHHhhC-CCcEEEE
Confidence 4667889998 56999999999999998 477776432 23444555555443 1355555
Q ss_pred ecCCCcch--hh-------hcCCCcEEEEcC
Q psy9587 193 ETKVDEIS--EE-------FVHGFDVVIATS 214 (236)
Q Consensus 193 ~~~l~~~~--~~-------~l~~~DlVI~~~ 214 (236)
..++++.. .. .+...|++|.+.
T Consensus 66 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 96 (262)
T 3pk0_A 66 QTDVSDRAQCDALAGRAVEEFGGIDVVCANA 96 (262)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 55555421 11 223677777664
No 182
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.82 E-value=0.19 Score=41.84 Aligned_cols=78 Identities=14% Similarity=0.142 Sum_probs=51.0
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.+..+ ++..+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~~--~~~~~ 63 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADINA--------------------EAAEAVAKQIVADGG--TAISV 63 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHTTC--EEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCH--------------------HHHHHHHHHHHhcCC--cEEEE
Confidence 45678899995 69999999999999986 77766321 234455555655443 45555
Q ss_pred ecCCCcch--hh-------hcCCCcEEEEcC
Q psy9587 193 ETKVDEIS--EE-------FVHGFDVVIATS 214 (236)
Q Consensus 193 ~~~l~~~~--~~-------~l~~~DlVI~~~ 214 (236)
..++++.. .. .+...|++|.+.
T Consensus 64 ~~D~~~~~~~~~~~~~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 64 AVDVSDPESAKAMADRTLAEFGGIDYLVNNA 94 (253)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 66665421 11 223678888775
No 183
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.80 E-value=0.25 Score=41.95 Aligned_cols=91 Identities=13% Similarity=0.043 Sum_probs=55.2
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|.|+ |.+|+.+++.|+..|-.++++++.+.- +.++ +.+.. +. ++....+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~------------------~~~~----~~l~~--~~--~~~~~~D 59 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR------------------KKAA----KELRL--QG--AEVVQGD 59 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT------------------SHHH----HHHHH--TT--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC------------------CHHH----HHHHH--CC--CEEEEec
Confidence 57899997 899999999999988445666653210 0111 12222 23 3445555
Q ss_pred CCcch--hhhcCCCcEEEEcCCCH---------HHHHHHHHHHHHcCCc
Q psy9587 196 VDEIS--EEFVHGFDVVIATSCNP---------NQLIKIDDFCRSKSKI 233 (236)
Q Consensus 196 l~~~~--~~~l~~~DlVI~~~d~~---------~~r~~In~~c~~~~ip 233 (236)
+.+.. ...++++|+||.+.... ..-..+-+.|++.+++
T Consensus 60 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~ 108 (299)
T 2wm3_A 60 QDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLH 108 (299)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCC
Confidence 55432 45678899999887521 2233555667777764
No 184
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.77 E-value=0.14 Score=45.28 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=23.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHh-CCceEEEeeC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~-GVg~I~LvD~ 148 (236)
.+|+|+| +|.+|..+++.+... ++.=+.++|.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~ 55 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVR 55 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 5789999 899999999988743 4444445564
No 185
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.76 E-value=0.13 Score=45.81 Aligned_cols=34 Identities=0% Similarity=-0.170 Sum_probs=25.7
Q ss_pred ccceEEEEcCChhHH-HHHHHHHHh-CCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGA-EIAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGs-evak~La~~-GVg~I~LvD~ 148 (236)
+..+|+|||+|.+|. ..+..|... |+.-+.++|.
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~ 61 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR 61 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 446899999999998 789999886 4443446664
No 186
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=94.75 E-value=0.15 Score=43.34 Aligned_cols=79 Identities=18% Similarity=0.215 Sum_probs=53.1
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+.++|+|.|+ ||||.++++.|+..|. ++.+++.+. .|.+.+.+.|.+..+ .++..+.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~--------------------~~~~~~~~~l~~~~~-~~~~~~~ 68 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDV--------------------TKGHEAVEKLKNSNH-ENVVFHQ 68 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCH--------------------HHHHHHHHHHHTTTC-CSEEEEE
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCH--------------------HHHHHHHHHHHhcCC-CceEEEE
Confidence 5578899995 6999999999999998 477766321 244555666666553 3566666
Q ss_pred cCCCcc-h--h-------hhcCCCcEEEEcCC
Q psy9587 194 TKVDEI-S--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 194 ~~l~~~-~--~-------~~l~~~DlVI~~~d 215 (236)
.++++. . . +.+...|++|.+..
T Consensus 69 ~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 69 LDVTDPIATMSSLADFIKTHFGKLDILVNNAG 100 (311)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred ccCCCcHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 666553 2 1 12347899998875
No 187
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.74 E-value=0.035 Score=50.89 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=31.7
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+...+|+|+|+|++|..+++.|...|+.+++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 46678999999999999999999999989999874
No 188
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.74 E-value=0.09 Score=46.46 Aligned_cols=32 Identities=22% Similarity=0.182 Sum_probs=23.6
Q ss_pred ceEEEEcCChhHHHHHHHHH-H-hCCceEEEeeC
Q psy9587 117 YVYSTGPLTRVGAEIAKNII-L-SGVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La-~-~GVg~I~LvD~ 148 (236)
.+|+|||+|.+|...+..|. . .|+.-+.++|.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~ 36 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV 36 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC
Confidence 46899999999999999998 4 34443345553
No 189
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=94.73 E-value=0.074 Score=47.31 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=29.5
Q ss_pred cceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D 149 (236)
..+|+|||+|..|...++.|... ++.+|+++|.+
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 46899999999999999999874 78899998855
No 190
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=94.70 E-value=0.08 Score=46.86 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=25.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D 149 (236)
.+|+|+|+|.+|..+++.|... ++.-+.++|.+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~ 37 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR 37 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC
Confidence 4789999999999999999876 44445566754
No 191
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=94.67 E-value=0.24 Score=44.17 Aligned_cols=87 Identities=9% Similarity=0.121 Sum_probs=55.6
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||||.++++.|+..|.. +.++|.+.-....+ . + +.+.+++.+.... .++..
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~l-~----------~--~l~~~~~~~~~~g--~~~~~ 105 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGAN-IVIAAKTAQPHPKL-L----------G--TIYTAAEEIEAVG--GKALP 105 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESCCSCCSSS-C----------C--CHHHHHHHHHHTT--CEEEE
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCE-EEEEECChhhhhhh-H----------H--HHHHHHHHHHhcC--CeEEE
Confidence 567788999995 69999999999999974 88887654333333 1 1 1334455555543 35566
Q ss_pred EecCCCcch--h-------hhcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~-------~~l~~~DlVI~~~d 215 (236)
+..++.+.. . +.+...|++|.+..
T Consensus 106 ~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 106 CIVDVRDEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666665422 1 12347888887754
No 192
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=94.66 E-value=0.32 Score=41.20 Aligned_cols=92 Identities=11% Similarity=0.089 Sum_probs=57.5
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-. .++ ... .-...+.+...+.+..... ++..
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~-~~~-~~~------~~~~~~~~~~~~~~~~~~~--~~~~ 78 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQI-ASV-PYP------LATPEELAATVKLVEDIGS--RIVA 78 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCC-TTC-SSC------CCCHHHHHHHHHHHHHHTC--CEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeccccc-ccc-ccc------ccchHHHHHHHHHHHhcCC--eEEE
Confidence 356678999994 69999999999999987 7777754210 111 000 0112355566666666654 5666
Q ss_pred EecCCCcch--hhh-------cCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EEF-------VHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~~-------l~~~DlVI~~~d 215 (236)
+..++++.. ..+ +...|++|.+..
T Consensus 79 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 79 RQADVRDRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 677776532 222 347899998764
No 193
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=94.66 E-value=0.12 Score=45.28 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D 149 (236)
.+|+|||+|.+|...+..|... |+.-+.++|.+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~ 37 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAF 37 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCC
Confidence 4789999999999999999885 44434466643
No 194
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=94.65 E-value=0.18 Score=43.69 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=27.3
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+..+|+|.| .|++|+.+++.|+..|. +++++|.+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 54 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNF 54 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 446789998 68999999999999995 57777754
No 195
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=94.63 E-value=0.22 Score=41.33 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=27.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r 45 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADL 45 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 3557788998 57999999999999997 4777763
No 196
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.62 E-value=0.035 Score=48.39 Aligned_cols=33 Identities=18% Similarity=0.106 Sum_probs=28.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|.|||+|.+|+.++.+|+..|. +++++|.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 468999999999999999999996 588888654
No 197
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.62 E-value=0.12 Score=44.46 Aligned_cols=32 Identities=22% Similarity=0.067 Sum_probs=26.5
Q ss_pred cceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 116 IYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 116 ~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~ 148 (236)
..+|+|.|+ |++|+.+++.|+..|. +++++|.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r 35 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADR 35 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 357899996 8999999999999996 5777664
No 198
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.61 E-value=0.04 Score=47.60 Aligned_cols=36 Identities=6% Similarity=-0.144 Sum_probs=31.7
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
++.++|+|+|+||+|..++..|+..| .+++++|.+.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEECCH
Confidence 45678999999999999999999999 6899988653
No 199
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=94.58 E-value=0.092 Score=45.19 Aligned_cols=33 Identities=6% Similarity=0.009 Sum_probs=26.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEE-EeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVC-LLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~-LvD~D~ 150 (236)
.+|+|+|||.+|..+++.+...+- .|. ++|.+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~ 37 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTP 37 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCc
Confidence 468999999999999999998876 654 467543
No 200
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.58 E-value=0.04 Score=48.30 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=30.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCccc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVT 152 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve 152 (236)
.+|.|||+|.+|+.++.+|+..|. .++++|.+.-.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~ 56 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSK 56 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHH
Confidence 579999999999999999999997 68899876543
No 201
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=94.58 E-value=0.15 Score=42.19 Aligned_cols=78 Identities=14% Similarity=0.168 Sum_probs=48.6
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.|+ |++|.++++.|+..|.. +.++|.+. .+.+.+.+.+....+ ++..+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~~--~~~~~ 65 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINA--------------------DAANHVVDEIQQLGG--QAFAC 65 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESCH--------------------HHHHHHHHHHHHTTC--CEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCH--------------------HHHHHHHHHHHHhCC--ceEEE
Confidence 45578899984 79999999999999974 77766321 123344455555443 34455
Q ss_pred ecCCCcch--hhh-------cCCCcEEEEcC
Q psy9587 193 ETKVDEIS--EEF-------VHGFDVVIATS 214 (236)
Q Consensus 193 ~~~l~~~~--~~~-------l~~~DlVI~~~ 214 (236)
..++.+.. ... +...|+||.+.
T Consensus 66 ~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~A 96 (255)
T 1fmc_A 66 RCDITSEQELSALADFAISKLGKVDILVNNA 96 (255)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred EcCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 55554321 122 23788888765
No 202
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.57 E-value=0.15 Score=47.94 Aligned_cols=39 Identities=15% Similarity=0.012 Sum_probs=31.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDV 156 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL 156 (236)
-+|+|||+|.+|+.+|..|+..|.. ++++|.|.-....+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~-V~~~d~~~~~v~~l 47 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHD-VFCLDVDQAKIDIL 47 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCE-EEEEECCHHHHHHH
Confidence 4688999999999999999999974 88998764333344
No 203
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.56 E-value=0.14 Score=43.17 Aligned_cols=32 Identities=9% Similarity=0.004 Sum_probs=26.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++|+|.| .|+||.++++.|+..|. ++.++|.+
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~ 36 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLS 36 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecC
Confidence 5788999 68999999999999985 57777744
No 204
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.55 E-value=0.043 Score=47.86 Aligned_cols=37 Identities=19% Similarity=0.110 Sum_probs=32.7
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.++.++|+|+|+|.+|..+++.|...|+ ++.++|...
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~ 188 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARES 188 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 4677899999999999999999999998 799988653
No 205
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=94.55 E-value=0.15 Score=44.62 Aligned_cols=81 Identities=12% Similarity=0.091 Sum_probs=52.1
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.|+ ||||.++++.|+..|.. +.++|.+. .+.+.+.+.+....+..++..+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~-Vv~~~r~~--------------------~~~~~~~~~l~~~~~~~~~~~~ 64 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCK-VAIADIRQ--------------------DSIDKALATLEAEGSGPEVMGV 64 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCE-EEEEECCH--------------------HHHHHHHHHHHhcCCCCeEEEE
Confidence 35578899995 79999999999999985 76766321 2444555566665554456666
Q ss_pred ecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
..++++.. .+ .+...|+||.+..
T Consensus 65 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 65 QLDVASREGFKMAADEVEARFGPVSILCNNAG 96 (319)
T ss_dssp ECCTTCHHHHHHHHHHHHHHTCCEEEEEECCC
T ss_pred ECCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 66665421 11 1235677776654
No 206
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=94.52 E-value=0.12 Score=44.79 Aligned_cols=33 Identities=6% Similarity=-0.091 Sum_probs=24.2
Q ss_pred cceEEEEcCChhHHH-HHHHHHH-hCCceEEEeeC
Q psy9587 116 IYVYSTGPLTRVGAE-IAKNIIL-SGVKSVCLLDS 148 (236)
Q Consensus 116 ~~~VlIVG~GgvGse-vak~La~-~GVg~I~LvD~ 148 (236)
..+|+|||+|.+|.. .+..|.. .|+.-+.++|.
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~ 40 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP 40 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 467999999999996 8888876 34443446664
No 207
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=94.50 E-value=0.39 Score=40.86 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=57.9
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-....+ ....+. .-...+.+.+++.+..... ++..
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~-V~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~ 80 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGAD-IIAVDICKPIRAGV-VDTAIP---ASTPEDLAETADLVKGHNR--RIVT 80 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCSBTTB-CCCSSC---CCCHHHHHHHHHHHHTTTC--CEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeccccccccc-cccccc---cCCHHHHHHHHHHHhhcCC--ceEE
Confidence 356678999995 59999999999999986 77777653222111 110000 0112345556666665543 5666
Q ss_pred EecCCCcch--h-------hhcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~-------~~l~~~DlVI~~~d 215 (236)
+..++++.. . +.+...|++|.+..
T Consensus 81 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 81 AEVDVRDYDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 666666432 1 22347899998754
No 208
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.48 E-value=0.22 Score=44.99 Aligned_cols=95 Identities=15% Similarity=0.050 Sum_probs=54.1
Q ss_pred ccccchhhhhcccCccccccceEEEEcC-ChhHHHHHHHHHHhCC-c-----eEEEeeCCcccccCCCCCccccCCCcCC
Q psy9587 97 HTVTLTTLHTNWAGSQSYKIYVYSTGPL-TRVGAEIAKNIILSGV-K-----SVCLLDSGVVTKEDVNTAQFLAPHEDIG 169 (236)
Q Consensus 97 ~~~rydrq~~l~g~~~~lk~~~VlIVG~-GgvGsevak~La~~GV-g-----~I~LvD~D~Ve~sNL~~rq~l~~~~dIG 169 (236)
|......|.+--+ ..+..+|.|+|+ |+||..++-.|+...+ + .|.|+|-. -+
T Consensus 8 ~~~~~~~~~~~~~---s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~------------------~~ 66 (345)
T 4h7p_A 8 HMGTLEAQTQGPG---SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE------------------PA 66 (345)
T ss_dssp -----------------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG------------------GG
T ss_pred ccccccccccCCC---CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC------------------Cc
Confidence 3444544443332 234568999996 9999999999987654 3 68887721 12
Q ss_pred ChHHHHHHHHHHhhCCCceEEEEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 170 KNRAKSSEARAQNLNPNVEVTSNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 170 k~Kaea~~~~L~~inp~v~I~~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
..+++..+-.|............... ...+-++++|+||.+.+
T Consensus 67 ~~~~~Gva~DL~~~~~~~~~~~~~~~---~~~~a~~~advVvi~aG 109 (345)
T 4h7p_A 67 LKALAGVEAELEDCAFPLLDKVVVTA---DPRVAFDGVAIAIMCGA 109 (345)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEES---CHHHHTTTCSEEEECCC
T ss_pred cccchhhhhhhhhcCccCCCcEEEcC---ChHHHhCCCCEEEECCC
Confidence 23556666777776544444433221 23456899999998875
No 209
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.45 E-value=0.23 Score=42.21 Aligned_cols=93 Identities=15% Similarity=0.082 Sum_probs=58.1
Q ss_pred ccccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.| .||+|.++++.|+..|.. +.++|.+.-....+ .. .. -...+.+.+++.+.... .++..
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~-V~~~~r~~~~~~~~-~~----~~--~~~~~~~~~~~~~~~~~--~~~~~ 81 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGAD-IIACDICAPVSASV-TY----AP--ASPEDLDETARLVEDQG--RKALT 81 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCCTTC-CS----CC--CCHHHHHHHHHHHHTTT--CCEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeccccccccc-cc----cc--cCHHHHHHHHHHHHhcC--CeEEE
Confidence 35668899999 469999999999999985 77777543222222 11 00 12345666666666654 35566
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
+..++++.. .+ .+...|++|.+..
T Consensus 82 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 82 RVLDVRDDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666665422 12 2347899998753
No 210
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.44 E-value=0.046 Score=50.44 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=34.3
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+++..+|+|+|+|..|..+++.|+..|+++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4567899999999999999999999999999999976
No 211
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=94.43 E-value=0.28 Score=41.71 Aligned_cols=81 Identities=11% Similarity=0.208 Sum_probs=50.0
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCC-ceEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPN-VEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~-v~I~~ 191 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.+.... .++..
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~~~~~~~~~ 67 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGAS-VMIVGRNP--------------------DKLAGAVQELEALGANGGAIRY 67 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHTTCCSSCEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCH--------------------HHHHHHHHHHHHhCCCCceEEE
Confidence 4567889998 569999999999999985 77766332 2344445555554332 25555
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
+..++++.. .. .+...|++|.+..
T Consensus 68 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 100 (281)
T 3svt_A 68 EPTDITNEDETARAVDAVTAWHGRLHGVVHCAG 100 (281)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 555555421 11 2235677776643
No 212
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=94.43 E-value=0.22 Score=41.81 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=27.6
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVAR 39 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 3557788998 57999999999999997 4777663
No 213
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=94.42 E-value=0.041 Score=47.04 Aligned_cols=36 Identities=14% Similarity=0.017 Sum_probs=31.5
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.++. +|+|||+|++|..+++.|...|+ +++++|.+.
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~~ 149 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRTP 149 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 3566 89999999999999999999998 899988653
No 214
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=94.41 E-value=0.039 Score=48.14 Aligned_cols=34 Identities=6% Similarity=-0.044 Sum_probs=30.7
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++|+|+|+||.|..++..|...|+.+|+|++.+
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4679999999999999999999999999998644
No 215
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=94.40 E-value=0.097 Score=47.29 Aligned_cols=104 Identities=4% Similarity=-0.070 Sum_probs=59.3
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCC-------C
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNP-------N 186 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp-------~ 186 (236)
...+|+|.|+ |++|+++++.|+..|. ++++++...-.. ...+.+.+.+....+ .
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-----------------~~~~~l~~~l~~~~~~~~~~~~~ 129 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEE-----------------IAWYKLMTNLNDYFSEETVEMML 129 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSHH-----------------HHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCChH-----------------HHHHHHHHHHHHhcccccccccc
Confidence 4468999995 8999999999977775 455554221100 112233334433321 1
Q ss_pred ceEEEEecCCCc-chhhhcCCCcEEEEcCCC--------------HHHHHHHHHHHHHcCCcEEC
Q psy9587 187 VEVTSNETKVDE-ISEEFVHGFDVVIATSCN--------------PNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 187 v~I~~~~~~l~~-~~~~~l~~~DlVI~~~d~--------------~~~r~~In~~c~~~~ip~I~ 236 (236)
.++..+..++.+ .....+.++|+||.|... ...-..+.+.|...+..+||
T Consensus 130 ~~v~~v~~Dl~d~~~l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~ 194 (427)
T 4f6c_A 130 SNIEVIVGDFECMDDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIY 194 (427)
T ss_dssp TTEEEEEECC---CCCCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEeCCCCCcccCCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 356666666654 222256789999988642 22334566667665556653
No 216
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.36 E-value=0.16 Score=45.46 Aligned_cols=24 Identities=21% Similarity=-0.004 Sum_probs=21.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS 138 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~ 138 (236)
+..+|.|+|||.+|+.+++.|...
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~ 26 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDAS 26 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhc
Confidence 346789999999999999999874
No 217
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.35 E-value=0.22 Score=46.31 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=33.1
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|.|.|.+|+.+++.|...|..-+.+.|.+
T Consensus 215 ~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~ 251 (419)
T 3aoe_E 215 DLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSM 251 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4677899999999999999999999999988888854
No 218
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.35 E-value=0.085 Score=47.81 Aligned_cols=34 Identities=12% Similarity=-0.061 Sum_probs=29.7
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|..++..+|.
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 246 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEP 246 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 3468999999999999999999999988888773
No 219
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=94.34 E-value=0.11 Score=45.68 Aligned_cols=33 Identities=6% Similarity=-0.007 Sum_probs=24.8
Q ss_pred cceEEEEcCChhHHHHHHHHHHh-CCceEEEeeC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~ 148 (236)
..+|+|||+|.+|...+..|... |+.-+.++|.
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 38 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR 38 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC
Confidence 35789999999999999999885 3333335553
No 220
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=94.32 E-value=0.14 Score=44.68 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=25.4
Q ss_pred eEEEEcCChhHHHH-HHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEI-AKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsev-ak~La~~GVg~I~LvD~D 149 (236)
+|+|||+|.+|... +..|...|+.-+.++|.+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~ 34 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTS 34 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSC
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCC
Confidence 58999999999998 888887666555677754
No 221
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=94.32 E-value=0.18 Score=43.38 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=25.0
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+|+|.| .|.+|+.+++.|+..|. +++++|.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred EEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 588999 68999999999999986 4776663
No 222
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.31 E-value=0.22 Score=41.89 Aligned_cols=78 Identities=17% Similarity=0.149 Sum_probs=50.4
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.+..+ ++..+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~~--~~~~~ 66 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLKS--------------------EGAEAVAAAIRQAGG--KAIGL 66 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEESSH--------------------HHHHHHHHHHHHTTC--CEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCH--------------------HHHHHHHHHHHhcCC--cEEEE
Confidence 4667889999 569999999999999986 66766321 234555566655543 44555
Q ss_pred ecCCCcch--hh-------hcCCCcEEEEcC
Q psy9587 193 ETKVDEIS--EE-------FVHGFDVVIATS 214 (236)
Q Consensus 193 ~~~l~~~~--~~-------~l~~~DlVI~~~ 214 (236)
..++++.. .+ .+...|++|.+.
T Consensus 67 ~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 67 ECNVTDEQHREAVIKAALDQFGKITVLVNNA 97 (256)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55555421 11 234678888765
No 223
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.30 E-value=0.053 Score=47.38 Aligned_cols=37 Identities=19% Similarity=0.109 Sum_probs=32.9
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+++.|...|. +++++|.+.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~ 190 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSS 190 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 4677899999999999999999999998 799988653
No 224
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.27 E-value=0.12 Score=47.56 Aligned_cols=98 Identities=12% Similarity=-0.009 Sum_probs=57.1
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC-CCceEEEE
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN-PNVEVTSN 192 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in-p~v~I~~~ 192 (236)
+..+|+|||+|.+|...+..|... |+.-+.++|. ...|++.+++.+.+.. |.++ .+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--------------------~~~~~~~~a~~~~~~g~~~~~--~~ 76 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--------------------DPYMVGRAQEILKKNGKKPAK--VF 76 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--------------------CHHHHHHHHHHHHHTTCCCCE--EE
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--------------------CHHHHHHHHHHHHhcCCCCCc--ee
Confidence 446899999999999999888764 3332334442 2235666666665433 2222 22
Q ss_pred ecCCCcchhhhcC--CCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 193 ETKVDEISEEFVH--GFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 193 ~~~l~~~~~~~l~--~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
....+ .-.++++ +.|+|+.|+.+.. ...+...|.+.|+++++
T Consensus 77 ~~~~~-~~~~ll~~~~vD~V~i~tp~~~-h~~~~~~al~aGkhV~~ 120 (444)
T 2ixa_A 77 GNGND-DYKNMLKDKNIDAVFVSSPWEW-HHEHGVAAMKAGKIVGM 120 (444)
T ss_dssp CSSTT-THHHHTTCTTCCEEEECCCGGG-HHHHHHHHHHTTCEEEE
T ss_pred ccCCC-CHHHHhcCCCCCEEEEcCCcHH-HHHHHHHHHHCCCeEEE
Confidence 21000 1134554 5899988886543 33444556677887764
No 225
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=94.25 E-value=0.41 Score=40.62 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=55.3
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+.-... . . ...-...+.+...+.+.+... ++..+
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~-~--~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~ 76 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGAD-IAICDRCENSDV-V--G-----YPLATADDLAETVALVEKTGR--RCISA 76 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTT-C--S-----SCCCCHHHHHHHHHHHHHTTC--CEEEE
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCccccc-c--c-----cccccHHHHHHHHHHHHhcCC--eEEEE
Confidence 4667889999 569999999999999986 778775431110 0 0 001122344555555655543 55666
Q ss_pred ecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
..++++.. .. .+...|++|.+..
T Consensus 77 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (281)
T 3s55_A 77 KVDVKDRAALESFVAEAEDTLGGIDIAITNAG 108 (281)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 66665422 12 2347899987753
No 226
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=94.25 E-value=0.27 Score=46.27 Aligned_cols=80 Identities=14% Similarity=0.163 Sum_probs=49.0
Q ss_pred cceEEEEcCChh-HHHHHHHHHHh--CC--ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEE
Q psy9587 116 IYVYSTGPLTRV-GAEIAKNIILS--GV--KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 116 ~~~VlIVG~Ggv-Gsevak~La~~--GV--g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~ 190 (236)
..+|.|||+|++ |..++..|+.. +. .+|.|+|-|.-...-+ .+.....+.......+|.
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~----------------~~~~~~~l~~~~~~~~I~ 91 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRI----------------AGACDVFIREKAPDIEFA 91 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHH----------------HHHHHHHHHHHCTTSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHH----------------HHHHHHHhccCCCCCEEE
Confidence 357899999998 66678888887 66 5699999543110000 111122223445556666
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
.... -.+-++++|+||.+...
T Consensus 92 ~t~D-----~~eal~~AD~VViaag~ 112 (472)
T 1u8x_X 92 ATTD-----PEEAFTDVDFVMAHIRV 112 (472)
T ss_dssp EESC-----HHHHHSSCSEEEECCCT
T ss_pred EECC-----HHHHHcCCCEEEEcCCC
Confidence 5311 12457899999999865
No 227
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.23 E-value=0.061 Score=48.82 Aligned_cols=37 Identities=16% Similarity=0.029 Sum_probs=32.9
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.++..+|+|+|+|++|..+++.+...|. +++++|.+.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~ 201 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINI 201 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCH
Confidence 4677899999999999999999999999 799998653
No 228
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=94.22 E-value=0.25 Score=42.76 Aligned_cols=79 Identities=13% Similarity=0.157 Sum_probs=50.7
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.... .++..+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~--~~~~~~ 85 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGAR-LVLSDVDQ--------------------PALEQAVNGLRGQG--FDAHGV 85 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHTT--CCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH--------------------HHHHHHHHHHHhcC--CceEEE
Confidence 46678999995 68999999999999975 77766321 23444555565543 345555
Q ss_pred ecCCCcch--hhh-------cCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--EEF-------VHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~~~-------l~~~DlVI~~~d 215 (236)
..++++.. .++ +...|++|.+..
T Consensus 86 ~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 86 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred EccCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 55555422 112 236788887753
No 229
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=94.19 E-value=0.32 Score=39.99 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=26.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCc------eEEEeeC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVK------SVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg------~I~LvD~ 148 (236)
++|+|.| .|++|.++++.|+..|.. ++.++|.
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r 41 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR 41 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC
Confidence 4678888 679999999999999985 6777663
No 230
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=94.15 E-value=0.27 Score=40.62 Aligned_cols=35 Identities=26% Similarity=0.217 Sum_probs=28.7
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~ 47 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGAS-VVLLGRT 47 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEecC
Confidence 46678899995 69999999999999985 7776643
No 231
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=94.15 E-value=0.41 Score=41.35 Aligned_cols=97 Identities=7% Similarity=0.004 Sum_probs=57.0
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.+|+|.| .|.+|+.+++.|+..|. -+++++|...-.. +. . .+.++. .-.++.+..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~---~------------------~~~~~~-~~~~~~~~~ 61 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG-NK---A------------------NLEAIL-GDRVELVVG 61 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC-CG---G------------------GTGGGC-SSSEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC-Ch---h------------------HHhhhc-cCCeEEEEC
Confidence 4688999 68999999999999943 2577777532110 00 0 001111 124555666
Q ss_pred CCCcch--hhhcCCCcEEEEcCCCH-----------------HHHHHHHHHHHHcCCcEEC
Q psy9587 195 KVDEIS--EEFVHGFDVVIATSCNP-----------------NQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 195 ~l~~~~--~~~l~~~DlVI~~~d~~-----------------~~r~~In~~c~~~~ip~I~ 236 (236)
++.+.. .+.++++|+||.|.... ..-..+-+.|...++.+||
T Consensus 62 Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~ 122 (348)
T 1oc2_A 62 DIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHH 122 (348)
T ss_dssp CTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 665532 45678889999886421 1123455677766666553
No 232
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.15 E-value=0.19 Score=42.30 Aligned_cols=35 Identities=23% Similarity=0.110 Sum_probs=28.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~ 40 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFT-VFAGRRN 40 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCC
Confidence 4557888999 559999999999999985 7777743
No 233
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.13 E-value=0.26 Score=37.44 Aligned_cols=89 Identities=10% Similarity=0.033 Sum_probs=54.8
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+..+|+|+|+|+.|..+++.|... |..-+.++|.|.- .. +.. +. .+.|-.
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~---~~-g~~-i~----------------------g~pV~g-- 53 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRK---KH-KTT-MQ----------------------GITIYR-- 53 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGG---GT-TCE-ET----------------------TEEEEC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcc---cC-CCE-ec----------------------CeEEEC--
Confidence 345789999999999999999875 6666778886531 11 111 10 122221
Q ss_pred cCCCcchhhhc--CCCcEEEEcCC--CHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEISEEFV--HGFDVVIATSC--NPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~~~~l--~~~DlVI~~~d--~~~~r~~In~~c~~~~ip~I 235 (236)
+++ -.+++ ...|.|+.|.. ....+..+-+.|...++.+.
T Consensus 54 --~~~-l~~~~~~~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~ 96 (141)
T 3nkl_A 54 --PKY-LERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVL 96 (141)
T ss_dssp --GGG-HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred --HHH-HHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 111 11222 24677777765 34667788888998888764
No 234
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.13 E-value=0.072 Score=44.79 Aligned_cols=87 Identities=6% Similarity=0.133 Sum_probs=51.2
Q ss_pred eEEEEcC-ChhHHHHHHHHHHh--CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILS--GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~--GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
+|+|.|+ |.+|+.+++.|+.. |. ++++++.+. +.. .. +.. +. ++.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~---~~~-----------------~~----~~~--~~--~~~~~~ 51 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNP---AKA-----------------QA----LAA--QG--ITVRQA 51 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCT---TTC-----------------HH----HHH--TT--CEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcCh---Hhh-----------------hh----hhc--CC--CeEEEc
Confidence 3788996 89999999999987 74 477766431 111 00 111 12 334455
Q ss_pred CCCcch--hhhcCCCcEEEEcCCC-----HHHHHHHHHHHHHcCCc
Q psy9587 195 KVDEIS--EEFVHGFDVVIATSCN-----PNQLIKIDDFCRSKSKI 233 (236)
Q Consensus 195 ~l~~~~--~~~l~~~DlVI~~~d~-----~~~r~~In~~c~~~~ip 233 (236)
++.+.. .+.++++|+||.+... ......+-+.|++.+++
T Consensus 52 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~ 97 (286)
T 2zcu_A 52 DYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVK 97 (286)
T ss_dssp CTTCHHHHHHHTTTCSEEEECC--------CHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 555422 4567788888877642 23345566677776653
No 235
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=94.12 E-value=0.18 Score=41.27 Aligned_cols=34 Identities=12% Similarity=-0.087 Sum_probs=26.6
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhC-CceEEEeeCC
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSG-VKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~G-Vg~I~LvD~D 149 (236)
..+|+|.| .|++|.++++.|+..| -.++++++.+
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 45789999 6899999999999995 2357776654
No 236
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=94.12 E-value=0.042 Score=47.54 Aligned_cols=35 Identities=3% Similarity=-0.111 Sum_probs=31.0
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|+|+||+|..++..|+..| .+++++|.+
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~ 151 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRT 151 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECC
Confidence 45678999999999999999999999 789998744
No 237
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.11 E-value=0.053 Score=47.29 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=29.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC-ceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV-KSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV-g~I~LvD~D 149 (236)
.+|+|||+|++|+.++..|+..|. ++++++|.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 478999999999999999999995 479999865
No 238
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=94.11 E-value=0.19 Score=43.84 Aligned_cols=34 Identities=9% Similarity=-0.194 Sum_probs=27.8
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+..+|+|.| .|.+|+.+++.|+..|. +++++|.+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 346789999 68999999999999996 57777753
No 239
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.10 E-value=0.3 Score=41.39 Aligned_cols=34 Identities=15% Similarity=-0.049 Sum_probs=27.8
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r 63 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDI 63 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEEc
Confidence 4557889998 569999999999999975 777664
No 240
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.08 E-value=0.33 Score=39.82 Aligned_cols=77 Identities=25% Similarity=0.272 Sum_probs=49.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
++|+|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.+.. ..++..+..+
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~-~~~~~~~~~D 60 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYA-LALGARSV--------------------DRLEKIAHELMQEQ-GVEVFYHHLD 60 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHHH-CCCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCH--------------------HHHHHHHHHHHhhc-CCeEEEEEec
Confidence 5688888 569999999999999976 67766321 23444555554322 2456666666
Q ss_pred CCcch--hhhc-------CCCcEEEEcCC
Q psy9587 196 VDEIS--EEFV-------HGFDVVIATSC 215 (236)
Q Consensus 196 l~~~~--~~~l-------~~~DlVI~~~d 215 (236)
+++.. .+++ ...|++|.+..
T Consensus 61 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag 89 (235)
T 3l77_A 61 VSKAESVEEFSKKVLERFGDVDVVVANAG 89 (235)
T ss_dssp TTCHHHHHHHCC-HHHHHSSCSEEEECCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 65432 2222 36888887753
No 241
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=94.07 E-value=0.31 Score=40.24 Aligned_cols=86 Identities=10% Similarity=0.055 Sum_probs=56.9
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.++++|+|+|+-|.+++..|...|..-+.++|++.-.. .+ . .+.|-.....
T Consensus 12 ~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~~~~-~~------~----------------------g~~Vlg~~~~ 62 (220)
T 4ea9_A 12 IGGVVIIGGGGHAKVVIESLRACGETVAAIVDADPTRR-AV------L----------------------GVPVVGDDLA 62 (220)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC----CB------T----------------------TBCEEESGGG
T ss_pred CCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCcccC-cC------C----------------------CeeEECCHHH
Confidence 35689999999999999999998888889999764211 12 1 1122221111
Q ss_pred CCcchhhhcC-CCcEEEEcCCCHHHHHHHHHHHHHcCCcE
Q psy9587 196 VDEISEEFVH-GFDVVIATSCNPNQLIKIDDFCRSKSKIS 234 (236)
Q Consensus 196 l~~~~~~~l~-~~DlVI~~~d~~~~r~~In~~c~~~~ip~ 234 (236)
+ .++.+ ..+-++.+..+...|..+.+.+...+..+
T Consensus 63 ~----~~~~~~~~~~v~iAIg~~~~R~~i~~~l~~~g~~~ 98 (220)
T 4ea9_A 63 L----PMLREQGLSRLFVAIGDNRLRQKLGRKARDHGFSL 98 (220)
T ss_dssp H----HHHHHTTCCEEEECCCCHHHHHHHHHHHHHTTCEE
T ss_pred H----HHhhcccccEEEEecCCHHHHHHHHHHHHhcCCCc
Confidence 1 11221 24556778888999999999999887654
No 242
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=94.06 E-value=0.048 Score=47.93 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=28.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|||+|..|..+|..|++.|+. ++|+|.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~-v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK-VTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC-EEEEecC
Confidence 4689999999999999999999996 8888754
No 243
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.06 E-value=0.22 Score=41.94 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=52.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+.+.+.+..+ ++..+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~~--~~~~~ 83 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARDV--------------------EKLRAVEREIVAAGG--EAESH 83 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHTTC--EEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCH--------------------HHHHHHHHHHHHhCC--ceeEE
Confidence 4667899999 479999999999999986 77766321 244555666665543 55666
Q ss_pred ecCCCcch--h-------hhcCCCcEEEEcCC
Q psy9587 193 ETKVDEIS--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~-------~~l~~~DlVI~~~d 215 (236)
..++++.. . +.+...|+||.+..
T Consensus 84 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 84 ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG 115 (262)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EecCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 66665422 1 12346788887754
No 244
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.06 E-value=0.19 Score=41.74 Aligned_cols=33 Identities=18% Similarity=0.109 Sum_probs=26.5
Q ss_pred ccceEEEEc-CChhHHHHHHHHHH-hCCceEEEeeC
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIIL-SGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~-~GVg~I~LvD~ 148 (236)
+.++|+|.| .|++|.++++.|+. .|. ++.+++.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTAR 37 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeC
Confidence 346788888 57999999999999 897 5777664
No 245
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.05 E-value=0.062 Score=49.74 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=34.8
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+...+|+|+|+|..|..+++.|+.+|+++|+++|.+-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45667999999999999999999999999999999875
No 246
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.02 E-value=0.042 Score=49.63 Aligned_cols=32 Identities=16% Similarity=0.005 Sum_probs=28.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|..|+.++..|+..|. .++++|.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 468999999999999999999996 48888865
No 247
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=94.02 E-value=0.22 Score=43.87 Aligned_cols=76 Identities=17% Similarity=0.170 Sum_probs=47.4
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCC-ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC----CCceEEE
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILSGV-KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN----PNVEVTS 191 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~GV-g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in----p~v~I~~ 191 (236)
+|+|+|+ |.+|+.++..|+..|. .++.|+|- +.|- .|++..+..|.... ..+++..
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di----~~~~--------------~~~~~~~~dl~~~~~~~~~~~~i~~ 63 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR----EHSI--------------NKLEGLREDIYDALAGTRSDANIYV 63 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC----GGGH--------------HHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC----CCch--------------hhhHHHHHHHHHhHHhcCCCeEEEe
Confidence 5899998 9999999999998886 45888884 1111 13333333444332 2334444
Q ss_pred EecCCCcchhhhcCCCcEEEEcCC
Q psy9587 192 NETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
....+ .+.++++|+||.+..
T Consensus 64 ~~d~l----~~al~gaD~Vi~~Ag 83 (313)
T 1hye_A 64 ESDEN----LRIIDESDVVIITSG 83 (313)
T ss_dssp EETTC----GGGGTTCSEEEECCS
T ss_pred CCcch----HHHhCCCCEEEECCC
Confidence 22111 345789999998864
No 248
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=94.01 E-value=0.19 Score=41.60 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=49.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.+. . .+.+.+.+.+.... .++..+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~--~-----------------~~~~~~~~~~~~~~--~~~~~~ 62 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAK-VGLHGRKA--P-----------------ANIDETIASMRADG--GDAAFF 62 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSC--C-----------------TTHHHHHHHHHHTT--CEEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEECCCc--h-----------------hhHHHHHHHHHhcC--CceEEE
Confidence 3456788888 579999999999999975 77766431 0 12333444454433 355566
Q ss_pred ecCCCcch--hhhc-------CCCcEEEEcCC
Q psy9587 193 ETKVDEIS--EEFV-------HGFDVVIATSC 215 (236)
Q Consensus 193 ~~~l~~~~--~~~l-------~~~DlVI~~~d 215 (236)
..++.+.. .+.+ ...|+||.+..
T Consensus 63 ~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag 94 (258)
T 3afn_B 63 AADLATSEACQQLVDEFVAKFGGIDVLINNAG 94 (258)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 66665422 2222 36888887654
No 249
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=94.00 E-value=0.086 Score=46.59 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=23.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHh-CCceEEEeeC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~ 148 (236)
.+|+|||+|.+|...+..|... |+.-+.++|.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~ 35 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV 35 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 3689999999999999998874 3333345553
No 250
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.99 E-value=0.42 Score=44.72 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=32.9
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|.|.|.||..+++.|...|..-+.+.|.+
T Consensus 232 ~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 232 QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4677899999999999999999999999888888854
No 251
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.98 E-value=0.058 Score=46.88 Aligned_cols=32 Identities=25% Similarity=0.167 Sum_probs=28.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 569999999999999999999997 58899865
No 252
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.96 E-value=0.062 Score=50.42 Aligned_cols=93 Identities=8% Similarity=-0.029 Sum_probs=55.5
Q ss_pred cceEEEEcCChh--HHHHHHHHHHhC--CceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 116 IYVYSTGPLTRV--GAEIAKNIILSG--VKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 116 ~~~VlIVG~Ggv--Gsevak~La~~G--Vg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
..+|.|||+|++ |..++..|+..- .++|+|+|-|.=....+ ..+.+.+.+ ...+|+.
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~-----------------~~~~~~l~~--~~~~I~~ 65 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKN-----------------EVIGNHSGN--GRWRYEA 65 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHH-----------------HHHHTTSTT--SCEEEEE
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHH-----------------HHHHHHHhc--cCCeEEE
Confidence 357899999997 689998888632 34899999653111101 111111111 2333332
Q ss_pred EecCCCcchhhhcCCCcEEEEcC--CCHHHHHHHHHHHHHcCC
Q psy9587 192 NETKVDEISEEFVHGFDVVIATS--CNPNQLIKIDDFCRSKSK 232 (236)
Q Consensus 192 ~~~~l~~~~~~~l~~~DlVI~~~--d~~~~r~~In~~c~~~~i 232 (236)
. ....+.++++|+||.+. +..+.+..=.++.+++|+
T Consensus 66 T-----tD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 66 V-----STLKKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp E-----SSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred E-----CCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 2 11245689999999998 566766655556666664
No 253
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=93.96 E-value=0.38 Score=40.19 Aligned_cols=78 Identities=15% Similarity=0.227 Sum_probs=49.0
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++++|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.... .++..+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~--~~~~~~ 61 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAA-VAIAARRV--------------------EKLRALGDELTAAG--AKVHVL 61 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHTT--CCEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCH--------------------HHHHHHHHHHHhcC--CcEEEE
Confidence 3456788898 569999999999999975 66766321 23444555555433 345555
Q ss_pred ecCCCcch--h-------hhcCCCcEEEEcC
Q psy9587 193 ETKVDEIS--E-------EFVHGFDVVIATS 214 (236)
Q Consensus 193 ~~~l~~~~--~-------~~l~~~DlVI~~~ 214 (236)
..++++.. . +.+...|++|.+.
T Consensus 62 ~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nA 92 (247)
T 2jah_A 62 ELDVADRQGVDAAVASTVEALGGLDILVNNA 92 (247)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55655421 1 1234678888764
No 254
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=93.96 E-value=0.29 Score=41.80 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=27.9
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r 50 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSN-VVIASR 50 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4567889998 569999999999999974 777663
No 255
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.95 E-value=0.36 Score=41.56 Aligned_cols=79 Identities=20% Similarity=0.169 Sum_probs=51.6
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++++|-|+ +|+|.++|+.|+..|.. +.++|.+. .+.+.+++.+++... ++..
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~-Vv~~~~~~--------------------~~~~~~~~~i~~~g~--~~~~ 60 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSI-VVAVELLE--------------------DRLNQIVQELRGMGK--EVLG 60 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHTTC--CEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCH--------------------HHHHHHHHHHHhcCC--cEEE
Confidence 467889999995 59999999999999986 77777321 245556666665543 4455
Q ss_pred EecCCCcch---------hhhcCCCcEEEEcC
Q psy9587 192 NETKVDEIS---------EEFVHGFDVVIATS 214 (236)
Q Consensus 192 ~~~~l~~~~---------~~~l~~~DlVI~~~ 214 (236)
+..++++.. .+.+...|++|.+.
T Consensus 61 ~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 61 VKADVSKKKDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 555554321 22345667777654
No 256
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=93.93 E-value=0.31 Score=41.36 Aligned_cols=93 Identities=10% Similarity=0.070 Sum_probs=57.7
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-..+.+ .+. .-...+.+.+++.+..... ++..
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~-V~~~~r~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~--~~~~ 77 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGAD-IIAVDIAGKLPSCV-PYD------PASPDDLSETVRLVEAANR--RIVA 77 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCCTTC-CSC------CCCHHHHHHHHHHHHHTTC--CEEE
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeccccccccc-ccc------ccCHHHHHHHHHHHHhcCC--eEEE
Confidence 356678899995 69999999999999985 77777543222222 111 1123355556666666544 5556
Q ss_pred EecCCCcch--h-------hhcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--E-------EFVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~-------~~l~~~DlVI~~~d 215 (236)
+..++++.. . +.+...|++|.+..
T Consensus 78 ~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 78 AVVDTRDFDRLRKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666665422 1 22356899998753
No 257
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.93 E-value=0.11 Score=46.11 Aligned_cols=34 Identities=12% Similarity=-0.115 Sum_probs=29.7
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|.+++..+|.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 204 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL 204 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 3468999999999999999998999988888874
No 258
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.92 E-value=0.063 Score=48.10 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=30.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|..++..+|.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~ 226 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDI 226 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 3468999999999999999999999988888873
No 259
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=93.92 E-value=0.54 Score=40.46 Aligned_cols=94 Identities=9% Similarity=0.152 Sum_probs=55.7
Q ss_pred eEEEEc-CChhHHHHHHHHHHh---CC--ceEEEeeCCccc--ccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceE
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILS---GV--KSVCLLDSGVVT--KEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEV 189 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~---GV--g~I~LvD~D~Ve--~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I 189 (236)
+|+|.| .|.+|+.+++.|+.. |+ .+++++|...-. ...+ ..+...-.+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~------------------------~~~~~~~~~ 57 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL------------------------APVDADPRL 57 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG------------------------GGGTTCTTE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh------------------------hhcccCCCe
Confidence 478898 689999999999996 53 467777753210 1111 011111245
Q ss_pred EEEecCCCcch--hhhcCCCcEEEEcCCCH-----------------HHHHHHHHHHHHcCC-cEE
Q psy9587 190 TSNETKVDEIS--EEFVHGFDVVIATSCNP-----------------NQLIKIDDFCRSKSK-ISL 235 (236)
Q Consensus 190 ~~~~~~l~~~~--~~~l~~~DlVI~~~d~~-----------------~~r~~In~~c~~~~i-p~I 235 (236)
+.+..++.+.. .+.+.++|+||.+.... ..-..+-+.|...++ .+|
T Consensus 58 ~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v 123 (337)
T 1r6d_A 58 RFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVV 123 (337)
T ss_dssp EEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 55566665432 34567899999886421 223455667777765 444
No 260
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=93.91 E-value=0.33 Score=45.82 Aligned_cols=94 Identities=11% Similarity=0.127 Sum_probs=52.2
Q ss_pred ceEEEEcCChh--HHHHHHHHHHh-C--CceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 117 YVYSTGPLTRV--GAEIAKNIILS-G--VKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 117 ~~VlIVG~Ggv--Gsevak~La~~-G--Vg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.+|.|||+|++ |+.++..|+.. + ..+++|+|-|.-..... .+.+...+.......+|..
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~----------------~~~~~~~l~~~~~~~~I~~ 67 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAI----------------LTIAKKYVEEVGADLKFEK 67 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHH----------------HHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHH----------------HHHHHHHhccCCCCcEEEE
Confidence 47899999997 56667788742 3 46799999543110001 0111222223333445554
Q ss_pred EecCCCcchhhhcCCCcEEEEcCCCH--HHHHHHHHHHHHcC
Q psy9587 192 NETKVDEISEEFVHGFDVVIATSCNP--NQLIKIDDFCRSKS 231 (236)
Q Consensus 192 ~~~~l~~~~~~~l~~~DlVI~~~d~~--~~r~~In~~c~~~~ 231 (236)
... -.+-++++|+||.+.... ..+..-.++..+.+
T Consensus 68 ttD-----~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g 104 (480)
T 1obb_A 68 TMN-----LDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYG 104 (480)
T ss_dssp ESC-----HHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTT
T ss_pred ECC-----HHHHhCCCCEEEECCCcccccccccccccccccc
Confidence 311 124578999999998653 33333444555554
No 261
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=93.89 E-value=0.21 Score=42.61 Aligned_cols=35 Identities=9% Similarity=0.139 Sum_probs=28.4
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~-V~~~~r 58 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGAR-ILINGT 58 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 356678999995 69999999999999984 667653
No 262
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=93.89 E-value=0.6 Score=36.29 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=28.3
Q ss_pred ccceEEEEcC----ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGPL----TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~----GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+..+|+|||+ |..|..++++|...|.. +..+|+.
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~-V~~vnp~ 50 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFE-VLPVNPN 50 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECTT
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCE-EEEeCCC
Confidence 4568999999 99999999999999994 6666655
No 263
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.88 E-value=0.069 Score=45.18 Aligned_cols=36 Identities=14% Similarity=0.048 Sum_probs=30.2
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+...+|.|||+|.+|+.+++.|+..|. +++++|.+.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 456789999999999999999999996 588888653
No 264
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=93.86 E-value=0.054 Score=50.74 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=32.2
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCC--ceEEEee
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGV--KSVCLLD 147 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GV--g~I~LvD 147 (236)
.++..+|+|+|+|+.|..+++.|...|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 3456789999999999999999999999 8999999
No 265
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=93.86 E-value=0.52 Score=39.50 Aligned_cols=34 Identities=12% Similarity=0.040 Sum_probs=27.6
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r 41 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSR 41 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 3557788998 569999999999999975 777663
No 266
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.84 E-value=0.047 Score=48.21 Aligned_cols=35 Identities=14% Similarity=0.020 Sum_probs=30.2
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
...+|+|+|+|++|..+++.+...|.+++..+|.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~ 198 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45689999999999999999999999778888754
No 267
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=93.84 E-value=0.27 Score=41.92 Aligned_cols=34 Identities=15% Similarity=0.100 Sum_probs=28.3
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASR 59 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 46678999995 5999999999999998 5777764
No 268
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.84 E-value=0.4 Score=42.29 Aligned_cols=88 Identities=11% Similarity=0.009 Sum_probs=53.4
Q ss_pred ceEEEEcCChhHHH-HHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGPLTRVGAE-IAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~GgvGse-vak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
++|.|||.|++|.. +|+.|...|.. +++.|...- .+ ..+.|.+. .+++. .+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~-V~~~D~~~~------------------~~----~~~~L~~~--gi~v~--~g- 56 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFE-VSGCDAKMY------------------PP----MSTQLEAL--GIDVY--EG- 56 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCE-EEEEESSCC------------------TT----HHHHHHHT--TCEEE--ES-
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCE-EEEEcCCCC------------------cH----HHHHHHhC--CCEEE--CC-
Confidence 57899999999996 99999999986 788784221 00 23445554 44443 22
Q ss_pred CCcchhhhc-CCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 196 VDEISEEFV-HGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 196 l~~~~~~~l-~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
.. ...+. .++|+||.+..-+...-. -+.++++|+|++
T Consensus 57 ~~--~~~l~~~~~d~vV~Spgi~~~~p~-~~~a~~~gi~v~ 94 (326)
T 3eag_A 57 FD--AAQLDEFKADVYVIGNVAKRGMDV-VEAILNLGLPYI 94 (326)
T ss_dssp CC--GGGGGSCCCSEEEECTTCCTTCHH-HHHHHHTTCCEE
T ss_pred CC--HHHcCCCCCCEEEECCCcCCCCHH-HHHHHHcCCcEE
Confidence 11 12233 479999987532211112 234677888875
No 269
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.84 E-value=0.34 Score=41.26 Aligned_cols=78 Identities=14% Similarity=0.226 Sum_probs=49.4
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.+... .++..+
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~-V~~~~r~~--------------------~~~~~~~~~~~~~~~-~~~~~~ 83 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAH-VVVTARSK--------------------ETLQKVVSHCLELGA-ASAHYI 83 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHHHTC-SEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCH--------------------HHHHHHHHHHHHhCC-CceEEE
Confidence 45578899995 79999999999999974 77766321 133344555555432 355566
Q ss_pred ecCCCcch--hhh-------cCCCcEEEEc
Q psy9587 193 ETKVDEIS--EEF-------VHGFDVVIAT 213 (236)
Q Consensus 193 ~~~l~~~~--~~~-------l~~~DlVI~~ 213 (236)
..++++.. ..+ +...|+||.+
T Consensus 84 ~~Dl~d~~~v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 84 AGTMEDMTFAEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTSCSEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 66665421 111 2467888866
No 270
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.82 E-value=0.075 Score=41.88 Aligned_cols=32 Identities=22% Similarity=0.114 Sum_probs=28.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.|+|||.|.+|.++|..|+..|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 58899999999999999999998 599998654
No 271
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.82 E-value=0.064 Score=45.97 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=27.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-cEEEEECC
Confidence 68999999999999999999996 68888754
No 272
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=93.82 E-value=0.42 Score=39.28 Aligned_cols=32 Identities=19% Similarity=0.043 Sum_probs=26.1
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEee
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD 147 (236)
+.++|+|.| .|++|.++++.|+..|.. +.++|
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~-V~~~~ 36 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGAN-IVLNG 36 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEc
Confidence 456788898 579999999999999974 66664
No 273
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=93.76 E-value=0.34 Score=40.53 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=27.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSR 46 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4557788888 56999999999999997 4777664
No 274
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=93.74 E-value=0.28 Score=45.81 Aligned_cols=77 Identities=16% Similarity=0.134 Sum_probs=48.9
Q ss_pred ceEEEEcCChh-HHHHHHHHHH--hCC--ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHH---HHHH-HhhCCCc
Q psy9587 117 YVYSTGPLTRV-GAEIAKNIIL--SGV--KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSS---EARA-QNLNPNV 187 (236)
Q Consensus 117 ~~VlIVG~Ggv-Gsevak~La~--~GV--g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~---~~~L-~~inp~v 187 (236)
.+|.|||+|++ |..++..|+. .+. .+|+|+|-|. |+.|++.+ +..+ ......+
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~------------------~~e~~~~~~~~~~~~~~~~~~~~ 69 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE------------------GKEKLEIVGALAKRMVEKAGVPI 69 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG------------------GHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCC------------------ChHHHHHHHHHHHHHHhhcCCCc
Confidence 47899999999 8888888887 554 5799999543 11233332 2222 2344455
Q ss_pred eEEEEecCCCcchhhhcCCCcEEEEcCCC
Q psy9587 188 EVTSNETKVDEISEEFVHGFDVVIATSCN 216 (236)
Q Consensus 188 ~I~~~~~~l~~~~~~~l~~~DlVI~~~d~ 216 (236)
+|..... -.+-++++|+||.+...
T Consensus 70 ~i~~t~D-----~~eal~gAD~VVitagv 93 (450)
T 1s6y_A 70 EIHLTLD-----RRRALDGADFVTTQFRV 93 (450)
T ss_dssp EEEEESC-----HHHHHTTCSEEEECCCT
T ss_pred EEEEeCC-----HHHHhCCCCEEEEcCCC
Confidence 6655311 13457899999999864
No 275
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=93.70 E-value=0.3 Score=40.10 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=27.4
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGST-VIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeC
Confidence 4557788998 579999999999999974 777663
No 276
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.69 E-value=0.091 Score=47.39 Aligned_cols=36 Identities=22% Similarity=0.087 Sum_probs=32.2
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++..+|+|+|+|++|..+++.|...|. +++++|.+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~ 198 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDVN 198 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 4667899999999999999999999999 79998864
No 277
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.69 E-value=0.33 Score=41.97 Aligned_cols=31 Identities=10% Similarity=0.118 Sum_probs=25.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.+|+|.| .|.+|+.+++.|+..|. +++++|.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 34 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDN 34 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEec
Confidence 4688998 58999999999999996 4777764
No 278
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=93.66 E-value=0.25 Score=41.43 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=45.8
Q ss_pred cccceEEEEc-CChhHHHHHHHHHH---hCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIIL---SGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEV 189 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~---~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I 189 (236)
++.++|+|.| .||+|.++++.|+. .|.. +.++|.+. .+.+.+++.+.+.++..++
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~~~~~~ 62 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSV-MLVSARSE--------------------SMLRQLKEELGAQQPDLKV 62 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE-EEEEESCH--------------------HHHHHHHHHHHHHCTTSEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCe-EEEEeCCH--------------------HHHHHHHHHHHhhCCCCeE
Confidence 4567888888 56999999999998 7874 66666321 2445566677777666677
Q ss_pred EEEecCCCc
Q psy9587 190 TSNETKVDE 198 (236)
Q Consensus 190 ~~~~~~l~~ 198 (236)
..+..++++
T Consensus 63 ~~~~~Dv~~ 71 (259)
T 1oaa_A 63 VLAAADLGT 71 (259)
T ss_dssp EEEECCTTS
T ss_pred EEEecCCCC
Confidence 777777765
No 279
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.65 E-value=0.29 Score=43.42 Aligned_cols=79 Identities=8% Similarity=-0.011 Sum_probs=47.9
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCc------eEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhh-CCCce
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVK------SVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNL-NPNVE 188 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg------~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i-np~v~ 188 (236)
.+|+|+|+ |.+|+.++..|+..|.. +|+++|.+.= +. ..|++..+..|... .+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~---~~-------------~~~~~g~~~dl~~~~~~~~- 68 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNE---KA-------------QKALQGVMMEIDDCAFPLL- 68 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCH---HH-------------HHHHHHHHHHHHTTTCTTE-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCc---cc-------------cccchhhHHHHhhhccccc-
Confidence 47899997 99999999999998873 7888874300 00 12333344445543 2321
Q ss_pred EEEEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 189 VTSNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 189 I~~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
..... .....+.++++|+||.+..
T Consensus 69 ~~i~~---~~~~~~al~~aD~Vi~~ag 92 (329)
T 1b8p_A 69 AGMTA---HADPMTAFKDADVALLVGA 92 (329)
T ss_dssp EEEEE---ESSHHHHTTTCSEEEECCC
T ss_pred CcEEE---ecCcHHHhCCCCEEEEeCC
Confidence 11111 1122456889999998764
No 280
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.63 E-value=0.31 Score=45.44 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=28.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|.+|+.++.+|+..|. +++++|.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGY-TVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 468999999999999999999998 48888754
No 281
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.63 E-value=0.061 Score=46.81 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=27.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.=|+|||+|..|+.+|..|++.|+. ++|+|.
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G~~-V~v~Er 35 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYGLK-TLMIEK 35 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc-EEEEeC
Confidence 3489999999999999999999996 778874
No 282
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=93.60 E-value=0.57 Score=43.82 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=52.6
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
..+|+|.| .|++|.++++.|+..|..++.+++...-. .++.+.+.+.|.... .++..+..
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~-----------------~~~~~~l~~~l~~~g--~~v~~~~~ 286 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPD-----------------ADGAGELVAELEALG--ARTTVAAC 286 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGG-----------------STTHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCC-----------------cHHHHHHHHHHHhcC--CEEEEEEe
Confidence 46788888 78999999999999999989988744311 012344555565543 45666666
Q ss_pred CCCcch--hhhcC------CCcEEEEcCC
Q psy9587 195 KVDEIS--EEFVH------GFDVVIATSC 215 (236)
Q Consensus 195 ~l~~~~--~~~l~------~~DlVI~~~d 215 (236)
++.+.. ...++ ..|+||.+..
T Consensus 287 Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG 315 (486)
T 2fr1_A 287 DVTDRESVRELLGGIGDDVPLSAVFHAAA 315 (486)
T ss_dssp CTTCHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEECCc
Confidence 665432 23333 3488887753
No 283
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.58 E-value=0.25 Score=42.16 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=27.9
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~-V~~~~r 58 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASR 58 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeC
Confidence 4557889998 569999999999999975 777763
No 284
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.57 E-value=0.074 Score=46.72 Aligned_cols=33 Identities=9% Similarity=0.004 Sum_probs=28.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|+|+|+|++|+.++..|+..|. .++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh
Confidence 368999999999999999999995 688888664
No 285
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.57 E-value=0.37 Score=45.11 Aligned_cols=96 Identities=11% Similarity=0.081 Sum_probs=57.3
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHH-H-----------
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARA-Q----------- 181 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L-~----------- 181 (236)
+..+|.|||||.+|..++..+... |+.-..+.|.+ ..|++.+++++ .
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~--------------------~era~~~a~~~yG~~~~~~~~~~~ 81 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARR--------------------LPNTFKAIRTAYGDEENAREATTE 81 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSS--------------------THHHHHHHHHHHSSSTTEEECSSH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCC--------------------HHHHHHHHHHhcCCccccccccch
Confidence 446899999999999999887642 33333344432 22333333222 1
Q ss_pred ----h-hCCCceEEEEecCCCcchhhhcC--CCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 182 ----N-LNPNVEVTSNETKVDEISEEFVH--GFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 182 ----~-inp~v~I~~~~~~l~~~~~~~l~--~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
+ +.+. .+..+ ..-.+++. +.|+|++|+.+...-..+...|.+.|+.+++
T Consensus 82 ~~i~~a~~~g-~~~v~-----~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~ 137 (446)
T 3upl_A 82 SAMTRAIEAG-KIAVT-----DDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVM 137 (446)
T ss_dssp HHHHHHHHTT-CEEEE-----SCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhhhhhccC-CceEE-----CCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEe
Confidence 0 0000 11111 11234444 6899999998887777888889999998873
No 286
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=93.56 E-value=0.35 Score=41.21 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=49.0
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+.++|+|.|+ ||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.... .++..+.
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~--~~~~~~~ 59 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAK-ILLGARRQ--------------------ARIEAIATEIRDAG--GTALAQV 59 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSH--------------------HHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCH--------------------HHHHHHHHHHHhcC--CcEEEEE
Confidence 3467889995 69999999999999986 66766321 23445555665543 3455555
Q ss_pred cCCCcch--h-------hhcCCCcEEEEcC
Q psy9587 194 TKVDEIS--E-------EFVHGFDVVIATS 214 (236)
Q Consensus 194 ~~l~~~~--~-------~~l~~~DlVI~~~ 214 (236)
.++++.. . +.+...|++|.+.
T Consensus 60 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 60 LDVTDRHSVAAFAQAAVDTWGRIDVLVNNA 89 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5555421 1 1234678888765
No 287
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=93.55 E-value=0.18 Score=42.18 Aligned_cols=32 Identities=19% Similarity=0.002 Sum_probs=25.9
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++|+|.|+ |++|+.+++.|+..|. +++++|.+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH-EVRLSDIV 35 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE-EEEECCSS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 36889996 8999999999999884 57776643
No 288
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.55 E-value=0.16 Score=44.56 Aligned_cols=34 Identities=18% Similarity=0.045 Sum_probs=30.5
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|...+..+...|...+..+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 4568999999999999999999999999888874
No 289
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=93.54 E-value=0.4 Score=41.17 Aligned_cols=31 Identities=16% Similarity=0.149 Sum_probs=25.3
Q ss_pred eEEEEcC-ChhHHHHHHHHHHh-CCceEEEeeCC
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~-GVg~I~LvD~D 149 (236)
+|+|.|+ |.+|+.+++.|+.. |. +++++|..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 34 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIG 34 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 5789996 89999999999998 65 57777753
No 290
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=93.53 E-value=0.46 Score=40.41 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=27.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 54 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLR-VFVCAR 54 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 3556788898 569999999999999975 777663
No 291
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=93.53 E-value=0.23 Score=43.34 Aligned_cols=32 Identities=9% Similarity=0.028 Sum_probs=24.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhC-CceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSG-VKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~G-Vg~I~LvD~D 149 (236)
+|+|||+|.+|...+..|...+ +.-+.++|.+
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~ 35 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRK 35 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence 6899999999999999998764 3333466644
No 292
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.52 E-value=0.043 Score=48.62 Aligned_cols=35 Identities=11% Similarity=-0.079 Sum_probs=30.2
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
...+|+|+|+|++|..++..+...|.+++..+|.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 200 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSR 200 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 34689999999999999999999999888888743
No 293
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=93.52 E-value=0.46 Score=40.96 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=28.3
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCC------ceEEEeeCC
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGV------KSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GV------g~I~LvD~D 149 (236)
+..+|+|.| .|++|+.+++.|+..|. .+++++|.+
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 445789999 68999999999999993 567777743
No 294
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=93.51 E-value=0.37 Score=41.93 Aligned_cols=35 Identities=3% Similarity=-0.176 Sum_probs=25.2
Q ss_pred cceEEEEcCChhHHH-HHHHHHHh-CCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAE-IAKNIILS-GVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGse-vak~La~~-GVg~I~LvD~D~ 150 (236)
..+|+|||+|.+|.. ++..|... |+.-+.++|.+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~ 41 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTR 41 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSC
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCH
Confidence 357899999999996 88888753 444344767543
No 295
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=93.50 E-value=0.18 Score=42.66 Aligned_cols=83 Identities=17% Similarity=0.139 Sum_probs=52.1
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|...- ...+.+.+++.+.... .++..
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~-----------------~~~~~~~~~~~~~~~~--~~~~~ 67 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVN-LVLHYHQAK-----------------DSDTANKLKDELEDQG--AKVAL 67 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCE-EEEEESCGG-----------------GHHHHHHHHHHHHTTT--CEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecCcc-----------------CHHHHHHHHHHHHhcC--CcEEE
Confidence 346678899994 69999999999999986 556553211 1124455566665543 35666
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
+..++++.. .. .+...|++|.+..
T Consensus 68 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 68 YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVG 100 (262)
T ss_dssp EECCCCSHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666665422 11 2346788887654
No 296
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=93.49 E-value=0.46 Score=40.63 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=27.9
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEee
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD 147 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~ 60 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFD-IAITG 60 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCe-EEEEe
Confidence 346678899995 69999999999999985 66666
No 297
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.49 E-value=0.084 Score=44.46 Aligned_cols=32 Identities=13% Similarity=0.091 Sum_probs=27.9
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|||+|.+|+.++..|+..|...++++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 58899999999999999999995568888854
No 298
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=93.49 E-value=0.2 Score=42.12 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=27.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 48 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADI 48 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3557788998 56999999999999997 4777664
No 299
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.47 E-value=0.43 Score=40.22 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=28.2
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r 43 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGAD-LVLAAR 43 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEES
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeC
Confidence 46678899995 58999999999999986 677664
No 300
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=93.46 E-value=0.054 Score=47.04 Aligned_cols=34 Identities=6% Similarity=-0.075 Sum_probs=30.1
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|+|+||+|..++..|+..| +++++|.+
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~ 159 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRT 159 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECC
Confidence 45678999999999999999999999 89998754
No 301
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.46 E-value=0.26 Score=46.90 Aligned_cols=61 Identities=10% Similarity=0.090 Sum_probs=44.0
Q ss_pred ccCccccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHH
Q psy9587 108 WAGSQSYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEA 178 (236)
Q Consensus 108 ~g~~~~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~ 178 (236)
+|....++.++|+|-|.|-||..+|+.|...|..-+.+.|.+ ..++.++.+-..+...+++
T Consensus 236 ~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~----------G~iyd~~Gid~~~l~~~k~ 296 (501)
T 3mw9_A 236 LGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESD----------GSIWNPDGIDPKELEDFKL 296 (501)
T ss_dssp TTCCSSSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS----------CEEECTTCCCHHHHHHHHH
T ss_pred cCCCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCC----------ceEECCCCCCHHHHHHHHH
Confidence 343334688999999999999999999999999988888833 3355555555444444443
No 302
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.45 E-value=0.081 Score=47.17 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=29.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|..++..+|.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~ 223 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 223 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 3468999999999999999998999988888774
No 303
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.44 E-value=0.1 Score=49.31 Aligned_cols=114 Identities=14% Similarity=0.100 Sum_probs=61.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhh-CCCceEEEEecC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNL-NPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~i-np~v~I~~~~~~ 195 (236)
.+|.|||+|..|+.+|.+|+..|. +++++|.+.-....+ ....... ..+ .-+..+.+.+..+ .+++-+...+..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l-~~~g~~g-~~i--~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDF-LANEAKG-TKV--VGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHH-HHTTTTT-SSC--EECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-HhcccCC-Cce--eccCCHHHHHhhccCCCEEEEecCCh
Confidence 468999999999999999999997 588888764332222 1110000 000 0001122222222 234333333332
Q ss_pred -CCc----chhhhcCCCcEEEEcCCC-HHHHHHHHHHHHHcCCcEE
Q psy9587 196 -VDE----ISEEFVHGFDVVIATSCN-PNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 196 -l~~----~~~~~l~~~DlVI~~~d~-~~~r~~In~~c~~~~ip~I 235 (236)
..+ .-...++.-++||++... +.....+.+.+...++.|+
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fv 125 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFV 125 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccc
Confidence 111 112345667899988754 4455566677777777654
No 304
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=93.44 E-value=0.23 Score=42.56 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=27.9
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567889998 56999999999999998 4777664
No 305
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=93.43 E-value=0.44 Score=40.06 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=27.6
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 39 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDM 39 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 3557889998 569999999999999975 667663
No 306
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=93.43 E-value=0.38 Score=41.28 Aligned_cols=36 Identities=19% Similarity=0.081 Sum_probs=28.0
Q ss_pred ccccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~ 61 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVT-VGALGRT 61 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 34567889999 469999999999999984 7777743
No 307
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=93.42 E-value=0.32 Score=41.19 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=28.3
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r 52 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGAR-LVLSGR 52 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 45678899994 69999999999999986 777664
No 308
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=93.41 E-value=0.55 Score=40.95 Aligned_cols=92 Identities=10% Similarity=0.097 Sum_probs=55.7
Q ss_pred ccccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.| .||+|.++++.|+..|.. +.++|.+.- ..++ .. . . -...+.+.+.+.+.+.. .++..
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~-~~~~-~~---~-~--~~~~~~~~~~~~~~~~~--~~~~~ 111 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGAD-IVAIDLCRQ-QPNL-DY---A-Q--GSPEELKETVRLVEEQG--RRIIA 111 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECCCC-CTTC-CS---C-C--CCHHHHHHHHHHHHHTT--CCEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCe-EEEEecccc-cccc-cc---c-c--cCHHHHHHHHHHHHhcC--CeEEE
Confidence 35667889998 469999999999999986 667665431 1122 10 0 0 11234455555565554 35666
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
+..++++.. .. .+...|++|.+..
T Consensus 112 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 112 RQADVRDLASLQAVVDEALAEFGHIDILVSNVG 144 (317)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666665422 12 2347899998753
No 309
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.41 E-value=0.54 Score=39.79 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=27.8
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r 53 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASR 53 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4557889998 569999999999999975 777663
No 310
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.41 E-value=0.19 Score=44.35 Aligned_cols=33 Identities=9% Similarity=-0.209 Sum_probs=28.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..+++.+...|.. +..+|.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~ 200 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTAR 200 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcC
Confidence 346899999999999999999899987 777763
No 311
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.37 E-value=0.07 Score=47.16 Aligned_cols=34 Identities=12% Similarity=-0.120 Sum_probs=29.7
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..+++.+...|.+++..+|.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~ 200 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEP 200 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4568999999999999999999999977887774
No 312
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=93.37 E-value=0.5 Score=40.27 Aligned_cols=80 Identities=19% Similarity=0.229 Sum_probs=49.6
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|... ..+.+.+++.+.+... ++..
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~-------------------~~~~~~~~~~l~~~~~--~~~~ 85 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVNA-------------------AERAQAVVSEIEQAGG--RAVA 85 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSC-------------------HHHHHHHHHHHHHTTC--CEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCC-------------------HHHHHHHHHHHHhcCC--cEEE
Confidence 356678999995 69999999999999986 55554211 1234455555655443 4445
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATS 214 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~ 214 (236)
+..++++.. .. .+...|++|.+.
T Consensus 86 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA 117 (271)
T 3v2g_A 86 IRADNRDAEAIEQAIRETVEALGGLDILVNSA 117 (271)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 555554321 11 223678888765
No 313
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=93.35 E-value=0.13 Score=46.19 Aligned_cols=77 Identities=14% Similarity=0.046 Sum_probs=52.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCC-ce-----EEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC-CCce
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGV-KS-----VCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN-PNVE 188 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GV-g~-----I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in-p~v~ 188 (236)
.+|+|+| +|.||+.++..|+..|+ ++ |.|+|-+. .+.|++..+..|.... |.+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~------------------~~~~~~g~a~DL~~~~~~~~~ 65 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP------------------MMGVLDGVLMELQDCALPLLK 65 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG------------------GHHHHHHHHHHHHHTCCTTEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC------------------ccccchhhHhhhHhhhhcccC
Confidence 4789999 89999999999998887 45 88888321 1135667777787753 5431
Q ss_pred EEEEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 189 VTSNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 189 I~~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
... ......+-++++|+||.+..
T Consensus 66 --~~~--~~~~~~~~~~daDvVvitAg 88 (333)
T 5mdh_A 66 --DVI--ATDKEEIAFKDLDVAILVGS 88 (333)
T ss_dssp --EEE--EESCHHHHTTTCSEEEECCS
T ss_pred --CEE--EcCCcHHHhCCCCEEEEeCC
Confidence 111 11223456889999998764
No 314
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=93.35 E-value=0.11 Score=45.76 Aligned_cols=37 Identities=11% Similarity=-0.016 Sum_probs=32.0
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|.. +..+|...
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~-V~~~dr~~ 155 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMR-VIAYTRSS 155 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCE-EEEECSSC
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcE-EEEEeccc
Confidence 46778999999999999999999999985 77777653
No 315
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=93.33 E-value=0.64 Score=39.35 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=27.8
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r 53 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSR 53 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeC
Confidence 4557888998 579999999999999975 777664
No 316
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=93.33 E-value=0.23 Score=42.63 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=28.5
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~ 41 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAK-VVVTARN 41 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECCSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECC
Confidence 45678899985 69999999999999986 7776643
No 317
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=93.32 E-value=0.24 Score=41.73 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=26.7
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 39 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDW 39 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEEC
Confidence 446788998 569999999999999975 667663
No 318
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=93.30 E-value=0.33 Score=41.41 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=28.5
Q ss_pred ccccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 113 SYKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 113 ~lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r 60 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAM-VIGTAT 60 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 35667889998 469999999999999984 666664
No 319
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=93.27 E-value=0.3 Score=40.60 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=28.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLP 45 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCC
Confidence 4557888998 569999999999999975 7776643
No 320
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.27 E-value=0.075 Score=46.53 Aligned_cols=33 Identities=15% Similarity=-0.028 Sum_probs=28.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|+|+|+|++|+.++..|+..|. .++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCc
Confidence 368999999999999999999996 588888664
No 321
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.23 E-value=0.097 Score=47.71 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=31.7
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|+|+|.+|..+|+.|...|.. +.+.|.|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Gak-Vvv~D~~ 205 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAK-LVVTDVN 205 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSC
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCE-EEEEcCC
Confidence 46778999999999999999999999995 6688854
No 322
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=93.23 E-value=0.18 Score=43.22 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=28.8
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r 65 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAH-VILHGV 65 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcC
Confidence 356678999995 69999999999999985 777664
No 323
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.23 E-value=0.099 Score=47.04 Aligned_cols=35 Identities=26% Similarity=0.061 Sum_probs=31.5
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++..+|+|+|+|++|..+++.+...|. +++++|.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~ 199 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDIN 199 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 455799999999999999999999999 89998854
No 324
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=93.22 E-value=0.46 Score=39.46 Aligned_cols=79 Identities=18% Similarity=0.137 Sum_probs=48.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.. . ..+.+.+.+.+..... ++..+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~----------~---------~~~~~~~~~~l~~~~~--~~~~~ 62 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAK-VVVNYRS----------K---------EDEANSVLEEIKKVGG--EAIAV 62 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESS----------C---------HHHHHHHHHHHHHTTC--EEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEcCC----------C---------hHHHHHHHHHHHhcCC--ceEEE
Confidence 3556788888 679999999999999975 6666631 0 1233444555554432 45555
Q ss_pred ecCCCcch--hhh-------cCCCcEEEEcC
Q psy9587 193 ETKVDEIS--EEF-------VHGFDVVIATS 214 (236)
Q Consensus 193 ~~~l~~~~--~~~-------l~~~DlVI~~~ 214 (236)
..++++.. .+. +...|+||.+.
T Consensus 63 ~~D~~~~~~~~~~~~~~~~~~g~id~li~~A 93 (261)
T 1gee_A 63 KGDVTVESDVINLVQSAIKEFGKLDVMINNA 93 (261)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55555421 122 23678888764
No 325
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=93.21 E-value=0.16 Score=45.27 Aligned_cols=35 Identities=11% Similarity=-0.013 Sum_probs=25.5
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D 149 (236)
+..+|+|||+|.+|...+..|... |+.-+.++|.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~ 39 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDIL 39 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSS
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCC
Confidence 346799999999999999988876 44433455643
No 326
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.20 E-value=0.089 Score=47.17 Aligned_cols=34 Identities=15% Similarity=-0.027 Sum_probs=30.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|..++..+|.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTR 215 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 3468999999999999999999999988888874
No 327
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.20 E-value=0.085 Score=45.34 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=29.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..|+|||+|.+|..+|..|++.|+ +++|+|...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 358999999999999999999999 589998663
No 328
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=93.19 E-value=0.26 Score=41.42 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=28.6
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~ 39 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGAR-VVITGRT 39 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 45678899995 69999999999999985 7777643
No 329
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=93.18 E-value=0.18 Score=42.64 Aligned_cols=33 Identities=21% Similarity=0.084 Sum_probs=26.3
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
..+|+|.| .|.+|+++++.|+..|. +++++|.+
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 45 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ 45 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred cceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc
Confidence 36788888 58999999999999884 57776643
No 330
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.18 E-value=0.41 Score=40.04 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=28.6
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~-V~~~~r~ 39 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGAT-VIVSDIN 39 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 46678999995 69999999999999985 7776643
No 331
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=93.17 E-value=0.16 Score=43.00 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=50.1
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~ 191 (236)
+++.++|+|.|+ ||+|.++++.|+..|.. +.+++.+. ..+.+.+++.+.+... ++..
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~ 83 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLK-VWINYRSN-------------------AEVADALKNELEEKGY--KAAV 83 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSC-------------------HHHHHHHHHHHHHTTC--CEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCC-------------------HHHHHHHHHHHHhcCC--ceEE
Confidence 456678999995 69999999999999986 66655321 1234445555555543 4455
Q ss_pred EecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 192 NETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 192 ~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
+..++.+.. .. .+...|++|.+..
T Consensus 84 ~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg 116 (271)
T 4iin_A 84 IKFDAASESDFIEAIQTIVQSDGGLSYLVNNAG 116 (271)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 555554321 11 2236788887653
No 332
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.17 E-value=0.56 Score=39.18 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=25.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 34 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFA-VAIADY 34 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeC
Confidence 5678888 569999999999999974 777663
No 333
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.17 E-value=0.35 Score=45.12 Aligned_cols=39 Identities=15% Similarity=-0.048 Sum_probs=33.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDV 156 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL 156 (236)
.++.|||+|.+|..+|.+|+..|.. ++++|.|.-....|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~-V~~~D~~~~kv~~l 47 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHE-VVCVDKDARKIELL 47 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCSTTHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHH
Confidence 4688999999999999999999974 88888776555556
No 334
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=93.17 E-value=0.44 Score=40.63 Aligned_cols=77 Identities=9% Similarity=0.139 Sum_probs=47.6
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+.++|+|.| .||+|.++++.|+..|.. +.++|.+. .+.+.+++.+.+... ++..+.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~--------------------~~~~~~~~~l~~~~~--~~~~~~ 79 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARDA--------------------KNVSAAVDGLRAAGH--DVDGSS 79 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH--------------------HHHHHHHHHHHTTTC--CEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCH--------------------HHHHHHHHHHHhcCC--cEEEEE
Confidence 456788999 469999999999999986 66666321 234455555655433 455555
Q ss_pred cCCCcch--h-------hhcCCCcEEEEcC
Q psy9587 194 TKVDEIS--E-------EFVHGFDVVIATS 214 (236)
Q Consensus 194 ~~l~~~~--~-------~~l~~~DlVI~~~ 214 (236)
.++++.. . +.+...|++|.+.
T Consensus 80 ~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 80 CDVTSTDEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSCCEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 5555421 1 1234678887765
No 335
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=93.15 E-value=0.73 Score=39.25 Aligned_cols=34 Identities=18% Similarity=0.071 Sum_probs=28.4
Q ss_pred ccccceEEEEc-CChhHHHHHHHHHHhCCceEEEee
Q psy9587 113 SYKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 113 ~lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD 147 (236)
.++.++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~ 62 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAH-VLAWG 62 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEc
Confidence 45678899999 469999999999999985 66766
No 336
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=93.15 E-value=0.38 Score=40.11 Aligned_cols=34 Identities=21% Similarity=0.025 Sum_probs=27.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~-v~~~~r 53 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYG 53 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcC
Confidence 3556789998 579999999999999974 666653
No 337
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.14 E-value=0.09 Score=46.13 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=30.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCccc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVT 152 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve 152 (236)
..|+|||+|.+|..+|..|++.|. +++|+|.+.+-
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~~ 52 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTMG 52 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 578999999999999999999998 59999976543
No 338
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=93.12 E-value=0.11 Score=46.51 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=32.1
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|...
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~~-V~~~dr~~ 170 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGMH-VIGVNTTG 170 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSC
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCCE-EEEECCCc
Confidence 57788999999999999999999999984 77778653
No 339
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=93.11 E-value=0.39 Score=42.06 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=25.3
Q ss_pred cceEEEEcCChhHHHHHHHHH-H-hCCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNII-L-SGVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La-~-~GVg~I~LvD~D 149 (236)
..+|+|||+|.+|...+..|. . .|+.-+.++|.+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~ 43 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALD 43 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 357899999999999999987 4 354444566643
No 340
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.10 E-value=0.098 Score=45.88 Aligned_cols=35 Identities=17% Similarity=0.031 Sum_probs=30.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCccc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVT 152 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve 152 (236)
..|+|||+|.+|+.+|..|++.|. +++|+|.+.+-
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 468999999999999999999997 59999976543
No 341
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.09 E-value=0.07 Score=46.31 Aligned_cols=31 Identities=19% Similarity=0.044 Sum_probs=28.0
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|||+|++|+.++..|+..|. .++++|.+
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 68999999999999999999996 68888866
No 342
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.09 E-value=0.32 Score=39.75 Aligned_cols=34 Identities=3% Similarity=-0.009 Sum_probs=27.8
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhCC-ceEEEeeCC
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSGV-KSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~GV-g~I~LvD~D 149 (236)
.++|+|.| .|++|.++++.|+..|. .++.++|.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 45788888 57999999999999995 568888754
No 343
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.09 E-value=0.075 Score=47.01 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=28.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|||+|.+|+.++..|+..|. .++++|.+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGE-AINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTC-CEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-EEEEEECh
Confidence 468999999999999999999996 58888863
No 344
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=93.08 E-value=0.096 Score=47.17 Aligned_cols=35 Identities=20% Similarity=0.099 Sum_probs=31.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVV 151 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~V 151 (236)
..|+|||+|..|..+|..|++.|..+++|+|.+..
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 46899999999999999999999967999998765
No 345
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=93.07 E-value=0.3 Score=41.73 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=28.3
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r 64 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQ-VAVAAR 64 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4567889999 569999999999999985 777764
No 346
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=93.06 E-value=0.15 Score=44.45 Aligned_cols=34 Identities=21% Similarity=0.055 Sum_probs=27.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~ 150 (236)
.+|+|||+|.+|...++.|... |+.-+.++|.+.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~ 45 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNP 45 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCH
Confidence 5789999999999999999986 555556888664
No 347
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.06 E-value=0.098 Score=43.38 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=28.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGF-KVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 578999999999999999999997 58888865
No 348
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=93.06 E-value=0.46 Score=39.51 Aligned_cols=32 Identities=16% Similarity=0.049 Sum_probs=25.6
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEee
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD 147 (236)
+.++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~ 35 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYN-VAVNY 35 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEe
Confidence 346788888 569999999999999986 55545
No 349
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=93.01 E-value=0.13 Score=46.42 Aligned_cols=37 Identities=16% Similarity=0.121 Sum_probs=32.3
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|...
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~~-V~~~d~~~ 181 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGAK-VIAYDVAY 181 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCCE-EEEECCCh
Confidence 56788999999999999999999999984 77788654
No 350
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.99 E-value=0.075 Score=48.04 Aligned_cols=29 Identities=14% Similarity=-0.013 Sum_probs=25.4
Q ss_pred eEEEEcCChhHHHHHHHHHH-hCCceEEEee
Q psy9587 118 VYSTGPLTRVGAEIAKNIIL-SGVKSVCLLD 147 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~-~GVg~I~LvD 147 (236)
+|+|||+|.+|+.++..|+. .|. .++++|
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~-~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGV-EVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTE-EEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 68999999999999999988 475 588887
No 351
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=92.95 E-value=0.37 Score=44.52 Aligned_cols=116 Identities=8% Similarity=0.005 Sum_probs=62.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCC--ceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGV--KSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GV--g~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~ 190 (236)
.+..+|+|.| .|++|+++++.|+..+- .++.+++...-....+ .+ +...-.-|.+. ..+.+.... .-+++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~-~~--l~~~~~~~~~~---~~~~~~~~~-~~~v~ 143 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RR--LEKTFDSGDPE---LLRHFKELA-ADRLE 143 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHH-HH--HHGGGCSSCHH---HHHHHHHHH-TTTEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHH-HH--HHHHHHhcchh---hhhhhhhhc-cCceE
Confidence 3557899999 58999999999999831 3577766432211111 00 00000001111 111111111 13566
Q ss_pred EEecCCCcc-------h-hhhcCCCcEEEEcCC-------------CHHHHHHHHHHHHHcCC-cEEC
Q psy9587 191 SNETKVDEI-------S-EEFVHGFDVVIATSC-------------NPNQLIKIDDFCRSKSK-ISLF 236 (236)
Q Consensus 191 ~~~~~l~~~-------~-~~~l~~~DlVI~~~d-------------~~~~r~~In~~c~~~~i-p~I~ 236 (236)
.+..++.+. . ...++++|+||.|.. |...-..+-+.|.+.++ .|||
T Consensus 144 ~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~ 211 (478)
T 4dqv_A 144 VVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTY 211 (478)
T ss_dssp EEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEE
T ss_pred EEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 666666521 1 345678999998753 23445567777877775 5553
No 352
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=92.95 E-value=0.56 Score=40.23 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=26.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCC-ceEEEeeCC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGV-KSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GV-g~I~LvD~D 149 (236)
.+|+|.| .|++|+.+++.|+..|. -+++++|..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 3589999 58999999999999984 367777753
No 353
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=92.95 E-value=0.22 Score=46.81 Aligned_cols=77 Identities=21% Similarity=0.221 Sum_probs=46.9
Q ss_pred eEEEEcCChhHHH--HHHHHHH----hC-CceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEE
Q psy9587 118 VYSTGPLTRVGAE--IAKNIIL----SG-VKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 118 ~VlIVG~GgvGse--vak~La~----~G-Vg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~ 190 (236)
+|.|||+|++|.. ++..|+. .| ..+|.|+|-|. ..+ . -.+..+.......+..++|+
T Consensus 2 KI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~---~rl-~------------~~~~~~~~~~~~~~~~~~i~ 65 (477)
T 3u95_A 2 KISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHE---RRL-N------------ASYILARKYVEELNSPVKVV 65 (477)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCH---HHH-H------------HHHHHHHHHHHHHTCCCEEE
T ss_pred EEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCH---HHH-H------------HHHHHHHHHHHHcCCCeEEE
Confidence 5789999998754 3333442 33 35799988543 222 0 11233444455667777777
Q ss_pred EEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 191 SNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
.... -.+-++++|+||.+..
T Consensus 66 ~t~d-----~~eAl~gAD~Vi~~~g 85 (477)
T 3u95_A 66 KTES-----LDEAIEGADFIINTAY 85 (477)
T ss_dssp EESC-----HHHHHTTCSEEEECCC
T ss_pred EeCC-----HHHHhCCCCEEEECcc
Confidence 6432 2356799999998864
No 354
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=92.94 E-value=0.16 Score=44.69 Aligned_cols=31 Identities=6% Similarity=0.009 Sum_probs=25.6
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+|+|.| .|.+|+.+++.|+..|.-+++.+|.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~ 33 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR 33 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence 588999 6899999999999999755666553
No 355
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.94 E-value=0.1 Score=46.45 Aligned_cols=34 Identities=21% Similarity=-0.057 Sum_probs=29.5
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..+|.|||+|..|+.+|..|+..|. .++++|.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4679999999999999999999998 488988653
No 356
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.93 E-value=0.18 Score=49.01 Aligned_cols=35 Identities=20% Similarity=0.129 Sum_probs=30.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+.+.|+|||.|..|...|..|++.|.. ++|+|...
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~-V~liE~~~ 424 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYD-VVLAEAGR 424 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCE-EEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCe-EEEEecCC
Confidence 346899999999999999999999975 99998643
No 357
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=92.92 E-value=0.56 Score=41.33 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=25.7
Q ss_pred eEEEEc-CChhHHHHHHHHH-HhCCceEEEeeCC
Q psy9587 118 VYSTGP-LTRVGAEIAKNII-LSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La-~~GVg~I~LvD~D 149 (236)
+|+|.| .|.+|+.+++.|+ ..|. +++++|..
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 36 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSL 36 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecC
Confidence 688998 5899999999999 9886 57777643
No 358
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=92.92 E-value=0.074 Score=47.26 Aligned_cols=88 Identities=7% Similarity=0.066 Sum_probs=47.8
Q ss_pred ceEEEEcCChhHH-HHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGPLTRVGA-EIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG~GgvGs-evak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.+|+|||||.+|. ..+..|... |+.-..++|.+ . ++.++++... +.+. .+.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~------~----------------~~~~a~~~~~--~~~~--~~~- 55 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH------V----------------NEKAAAPFKE--KGVN--FTA- 55 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT------C----------------CHHHHHHHHT--TTCE--EES-
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC------H----------------HHHHHHhhCC--CCCe--EEC-
Confidence 4789999999998 567766653 44434466644 1 1122222211 2322 111
Q ss_pred CCCcchhhhcC--CCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 195 KVDEISEEFVH--GFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 195 ~l~~~~~~~l~--~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
.+ .+++. +.|+|+.|+.+.. ...+...|.+.|+++++
T Consensus 56 ~~----~~ll~~~~~D~V~i~tp~~~-h~~~~~~al~aGk~Vl~ 94 (349)
T 3i23_A 56 DL----NELLTDPEIELITICTPAHT-HYDLAKQAILAGKSVIV 94 (349)
T ss_dssp CT----HHHHSCTTCCEEEECSCGGG-HHHHHHHHHHTTCEEEE
T ss_pred CH----HHHhcCCCCCEEEEeCCcHH-HHHHHHHHHHcCCEEEE
Confidence 11 23443 4788888886533 34444556677777763
No 359
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=92.92 E-value=0.27 Score=41.31 Aligned_cols=30 Identities=7% Similarity=0.082 Sum_probs=25.3
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+|+|.| .|.+|+.+++.|+..|. +++.++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDK 37 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecc
Confidence 689999 58999999999999885 5777665
No 360
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=92.91 E-value=0.18 Score=44.54 Aligned_cols=24 Identities=13% Similarity=-0.247 Sum_probs=18.7
Q ss_pred cccceEEEEcCChhHHHHHHHHHH
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIIL 137 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~ 137 (236)
.|..+|+|||||.+|..-+..+..
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~ 46 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNA 46 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTT
T ss_pred CCCccEEEEcCCHHHHHHHHHHHh
Confidence 356789999999999877776643
No 361
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=92.88 E-value=0.43 Score=39.82 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=27.4
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 46 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCAR 46 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3557788898 57999999999999997 4777663
No 362
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=92.88 E-value=0.21 Score=43.82 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=49.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCc---eEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVK---SVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg---~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
.+|+|||+|.+|...+..|...+-. -+.++|.+ ..|++.++++.. -.+ .
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~--------------------~~~a~~~a~~~~----~~~--~-- 54 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARD--------------------LSRAKEFAQKHD----IPK--A-- 54 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSS--------------------HHHHHHHHHHHT----CSC--E--
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCC--------------------HHHHHHHHHHcC----CCc--c--
Confidence 4689999999999999988765422 23333422 223444443321 101 1
Q ss_pred cCCCcchhhhcC--CCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 194 TKVDEISEEFVH--GFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 194 ~~l~~~~~~~l~--~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
+++ -.+++. +.|+|+.|+.+.. ...+...|.+.|+++++
T Consensus 55 --~~~-~~~ll~~~~vD~V~i~tp~~~-H~~~~~~al~~GkhVl~ 95 (334)
T 3ohs_X 55 --YGS-YEELAKDPNVEVAYVGTQHPQ-HKAAVMLCLAAGKAVLC 95 (334)
T ss_dssp --ESS-HHHHHHCTTCCEEEECCCGGG-HHHHHHHHHHTTCEEEE
T ss_pred --cCC-HHHHhcCCCCCEEEECCCcHH-HHHHHHHHHhcCCEEEE
Confidence 111 133443 5888888875543 34445556677777764
No 363
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=92.88 E-value=0.58 Score=39.38 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=26.4
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r 43 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFR-VVVHYR 43 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 456788888 569999999999999974 777663
No 364
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=92.87 E-value=0.17 Score=42.63 Aligned_cols=88 Identities=11% Similarity=0.078 Sum_probs=54.6
Q ss_pred ccceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+..+|+|||+|.+|..+++.+... |+.-+.++|.|.-.. ++. ++ .+.|..
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~----g~~-------i~----------------gv~V~~-- 129 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKV----GRP-------VR----------------GGVIEH-- 129 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTT----TCE-------ET----------------TEEEEE--
T ss_pred CCCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHH----hhh-------hc----------------CCeeec--
Confidence 345799999999999999964322 555667888654211 110 00 123322
Q ss_pred cCCCcchhhhcC-CCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEISEEFVH-GFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~~~~l~-~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
.++ -.++++ +.|+|+.|+.+... ..+.+.|.+.|+..|
T Consensus 130 --~~d-l~ell~~~ID~ViIA~Ps~~~-~ei~~~l~~aGi~~I 168 (211)
T 2dt5_A 130 --VDL-LPQRVPGRIEIALLTVPREAA-QKAADLLVAAGIKGI 168 (211)
T ss_dssp --GGG-HHHHSTTTCCEEEECSCHHHH-HHHHHHHHHHTCCEE
T ss_pred --HHh-HHHHHHcCCCEEEEeCCchhH-HHHHHHHHHcCCCEE
Confidence 111 234443 58999999876644 478888889888754
No 365
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.86 E-value=0.12 Score=45.72 Aligned_cols=36 Identities=17% Similarity=0.073 Sum_probs=31.3
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+..++|+|||+|.+|..+|+.|...|.. +..+|..
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~-V~~~d~~ 174 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGMK-VLAYDIL 174 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCE-EEEECSS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEECCC
Confidence 56778999999999999999999999974 7777754
No 366
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=92.85 E-value=0.14 Score=45.83 Aligned_cols=43 Identities=19% Similarity=0.089 Sum_probs=34.8
Q ss_pred cccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 107 NWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 107 l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
-|.... .+..++|+|||+|.+|..+|+.|...|+. +..+|...
T Consensus 129 ~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~-V~~~dr~~ 173 (324)
T 3hg7_A 129 LWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGMK-VLGVSRSG 173 (324)
T ss_dssp CCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred CCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCCE-EEEEcCCh
Confidence 454322 56788999999999999999999999984 77778654
No 367
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=92.84 E-value=0.12 Score=46.21 Aligned_cols=35 Identities=11% Similarity=-0.085 Sum_probs=30.3
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+...|+|||+|..|+.+|..|++.|+. ++|+|.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~-V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGID-CDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 346799999999999999999999985 88998764
No 368
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=92.83 E-value=0.94 Score=38.96 Aligned_cols=91 Identities=11% Similarity=0.120 Sum_probs=56.1
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCccc-ccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVT-KEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve-~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~ 190 (236)
.++.++|+|.|+ ||+|.++|+.|+..|.. +.++|.+.-. ...+ .. -...+.+.+.+.+..... ++.
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~--~~~ 92 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGAD-IIAIDVCKQLDGVKL-PM--------STPDDLAETVRQVEALGR--RII 92 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCCS-CC--------CCHHHHHHHHHHHHHTTC--CEE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEecccccccccc-cc--------cCHHHHHHHHHHHHhcCC--ceE
Confidence 456788999995 69999999999999986 6666644211 0111 00 112345556666666543 566
Q ss_pred EEecCCCcch--hh-------hcCCCcEEEEcCC
Q psy9587 191 SNETKVDEIS--EE-------FVHGFDVVIATSC 215 (236)
Q Consensus 191 ~~~~~l~~~~--~~-------~l~~~DlVI~~~d 215 (236)
.+..++++.. .. .+...|++|.+..
T Consensus 93 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 93 ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 6666666432 11 2347899987753
No 369
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=92.82 E-value=0.21 Score=42.80 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=28.9
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 4667889998 56999999999999997 47777754
No 370
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=92.82 E-value=0.096 Score=46.85 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=31.3
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+..++|+|||+|.+|..+|+.|...|. ++..+|.+
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~ 178 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRH 178 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4677899999999999999999999997 57888754
No 371
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=92.82 E-value=0.32 Score=45.25 Aligned_cols=37 Identities=19% Similarity=0.110 Sum_probs=33.4
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|.|.|.||..+++.|...|..-+.+.|.+
T Consensus 209 ~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 209 KMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp CGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 4677899999999999999999999999888888866
No 372
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=92.81 E-value=0.36 Score=41.36 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=28.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~ 62 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCH-VLCADID 62 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCE-EEEEESS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 4667889998 569999999999999984 7777743
No 373
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=92.81 E-value=0.12 Score=49.14 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=32.6
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|+|+|++|..+|+.|...|. ++.++|.+.
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~ 298 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDP 298 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 3677899999999999999999999999 688888653
No 374
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.80 E-value=0.1 Score=45.85 Aligned_cols=33 Identities=12% Similarity=0.049 Sum_probs=29.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~-~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 568999999999999999999998 589999775
No 375
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=92.79 E-value=0.5 Score=41.87 Aligned_cols=32 Identities=6% Similarity=0.055 Sum_probs=24.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHh-CCceEEEeeC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~ 148 (236)
.+|+|||+|.+|...++.|... ++.-+.++|.
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~ 39 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASR 39 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC
Confidence 5789999999999999998875 3433445563
No 376
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=92.78 E-value=0.51 Score=41.99 Aligned_cols=35 Identities=6% Similarity=0.176 Sum_probs=24.6
Q ss_pred hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 201 EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 201 ~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
.+++.++|+|+.|+.+....... ..+.+.|+++|+
T Consensus 74 ~~l~~~vDvV~~aTp~~~h~~~a-~~~l~aGk~Vi~ 108 (334)
T 2czc_A 74 NDLLEKVDIIVDATPGGIGAKNK-PLYEKAGVKAIF 108 (334)
T ss_dssp HHHHTTCSEEEECCSTTHHHHHH-HHHHHHTCEEEE
T ss_pred HHhccCCCEEEECCCccccHHHH-HHHHHcCCceEe
Confidence 44557899999999876544443 366677888763
No 377
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.77 E-value=0.091 Score=45.91 Aligned_cols=34 Identities=21% Similarity=0.159 Sum_probs=29.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVV 151 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~V 151 (236)
..|+|||+|.+|+.+|..|++.|. +++|+|....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~-~V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGL-NVLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCC
Confidence 358999999999999999999998 4999997654
No 378
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=92.76 E-value=0.13 Score=45.45 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=31.8
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|.. +..+|...
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~-V~~~d~~~ 175 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGMN-ILLYDPYP 175 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCCE-EEEECCCC
Confidence 56778999999999999999999999974 77877643
No 379
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=92.75 E-value=0.35 Score=42.31 Aligned_cols=34 Identities=3% Similarity=-0.053 Sum_probs=24.6
Q ss_pred cceEEEEcCChhHHHHHHHHHHh-CCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~-GVg~I~LvD~D 149 (236)
..+|+|||+|.+|..+++.|... ++.-..++|.+
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~ 43 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRN 43 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCC
Confidence 35789999999999999999874 33322366644
No 380
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=92.74 E-value=0.13 Score=45.91 Aligned_cols=37 Identities=16% Similarity=-0.015 Sum_probs=31.8
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|...
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~-V~~~d~~~ 179 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGAK-VITYDIFR 179 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCCE-EEEECCCc
Confidence 56778999999999999999999999974 77777543
No 381
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=92.74 E-value=0.66 Score=37.99 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=45.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
++|+|.| .|++|.++++.|+..|...+.+.+.+. .+.+.+++.+....+ ++..+..+
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~--------------------~~~~~~~~~~~~~~~--~~~~~~~D 59 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA--------------------KAAEEVSKQIEAYGG--QAITFGGD 59 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------------------HHHHHHHHHHHHHTC--EEEEEECC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------------------HHHHHHHHHHHhcCC--cEEEEeCC
Confidence 4678888 579999999999999976333233211 233444555555443 45555556
Q ss_pred CCcch--hhh-------cCCCcEEEEcC
Q psy9587 196 VDEIS--EEF-------VHGFDVVIATS 214 (236)
Q Consensus 196 l~~~~--~~~-------l~~~DlVI~~~ 214 (236)
+++.. ... +...|+||.+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~g~id~li~~A 87 (244)
T 1edo_A 60 VSKEADVEAMMKTAIDAWGTIDVVVNNA 87 (244)
T ss_dssp TTSHHHHHHHHHHHHHHSSCCSEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55421 122 23678888775
No 382
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.73 E-value=0.12 Score=44.30 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=28.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|+|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 468999999999999999999997 588888653
No 383
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=92.70 E-value=0.27 Score=44.09 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=24.6
Q ss_pred hhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 201 EEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 201 ~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
.+.+.++|+||+|+......... ..+.+.|+++|
T Consensus 73 ~~~~~~vDvV~~atp~~~~~~~a-~~~l~aG~~VI 106 (337)
T 1cf2_P 73 DDMLDEADIVIDCTPEGIGAKNL-KMYKEKGIKAI 106 (337)
T ss_dssp HHHHHTCSEEEECCSTTHHHHHH-HHHHHHTCCEE
T ss_pred HHHhcCCCEEEECCCchhhHHHH-HHHHHcCCEEE
Confidence 34557899999999887666654 45566677776
No 384
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=92.69 E-value=0.67 Score=36.25 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=28.2
Q ss_pred cceEEEEcC----ChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 116 IYVYSTGPL----TRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~----GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..+|+|||+ |..|..++++|...|.. +..+|+..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~-v~~vnp~~ 50 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYH-VIPVSPKV 50 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCC-EEEECSSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCE-EEEeCCcc
Confidence 367899999 78999999999999985 66666654
No 385
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.68 E-value=0.11 Score=45.46 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=30.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVV 151 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~V 151 (236)
..|+|||+|.+|+.+|..|++.|.. ++|+|.+..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~-V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVK-TLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-EEEEeCCCC
Confidence 4689999999999999999999975 999997654
No 386
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.67 E-value=0.13 Score=45.82 Aligned_cols=37 Identities=16% Similarity=0.013 Sum_probs=31.6
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+...+|+|||+|.+|..+|+.|...|. ++..+|.+.
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~ 183 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTR 183 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCc
Confidence 4677899999999999999999999997 478887543
No 387
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.66 E-value=0.09 Score=47.25 Aligned_cols=34 Identities=9% Similarity=-0.122 Sum_probs=29.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|..++..+|.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 228 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 228 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcC
Confidence 3468999999999999999999999767877774
No 388
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=92.65 E-value=0.12 Score=46.03 Aligned_cols=43 Identities=12% Similarity=0.132 Sum_probs=34.3
Q ss_pred cccCcc--ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 107 NWAGSQ--SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 107 l~g~~~--~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.|.... .+..++|+|||+|.+|..+|+.|...|+. +..+|.+.
T Consensus 128 ~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~-V~~~dr~~ 172 (315)
T 3pp8_A 128 LWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGFP-LRCWSRSR 172 (315)
T ss_dssp CCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTCC-EEEEESSC
T ss_pred ccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEEcCCc
Confidence 464332 56778999999999999999999999985 77777543
No 389
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.63 E-value=0.61 Score=44.05 Aligned_cols=90 Identities=10% Similarity=-0.005 Sum_probs=54.3
Q ss_pred ccceEEEEcCChhHHH-HHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGAE-IAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGse-vak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+..+|.+||.||+|.. +|+.|...|.. ++..|.... .+ ..+.|++. .+++. .
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~-V~~sD~~~~------------------~~----~~~~L~~~--gi~~~--~ 70 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHT-VTGSDANIY------------------PP----MSTQLEQA--GVTIE--E 70 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCCC------------------TT----HHHHHHHT--TCEEE--E
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCE-EEEECCCCC------------------cH----HHHHHHHC--CCEEE--C
Confidence 5578999999999986 79999999986 777774321 00 23445554 34443 2
Q ss_pred cCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
+. ....+..++|+||.+..-....-.+ +.+++.|+|++
T Consensus 71 G~---~~~~~~~~~d~vV~Spgi~~~~p~l-~~a~~~gi~v~ 108 (524)
T 3hn7_A 71 GY---LIAHLQPAPDLVVVGNAMKRGMDVI-EYMLDTGLRYT 108 (524)
T ss_dssp SC---CGGGGCSCCSEEEECTTCCTTSHHH-HHHHHHTCCEE
T ss_pred CC---CHHHcCCCCCEEEECCCcCCCCHHH-HHHHHCCCcEE
Confidence 21 1123446799999875322211222 45677888875
No 390
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=92.62 E-value=0.36 Score=40.64 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=25.1
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEE
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCL 145 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~L 145 (236)
+.++|+|.|+ ||+|.++++.|+..|...+.+
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~ 56 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVH 56 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 4567888984 699999999999999874343
No 391
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=92.62 E-value=0.98 Score=39.39 Aligned_cols=109 Identities=12% Similarity=0.015 Sum_probs=63.4
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+..+|+|+|+ |..|..++++|...|..-+..+|+..-..+ . .|.+-...+.+.+.+-.+++-+...+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~-~-----------~G~~vy~sl~el~~~~~~D~viI~tP 73 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT-H-----------LGLPVFNTVREAVAATGATASVIYVP 73 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE-E-----------TTEEEESSHHHHHHHHCCCEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccce-e-----------CCeeccCCHHHHhhcCCCCEEEEecC
Confidence 3468999998 999999999999999874556666422111 1 11111111223333335565555544
Q ss_pred cCCCcch-hhh-cCCCcEEEEcCC--CHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEIS-EEF-VHGFDVVIATSC--NPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~-~~~-l~~~DlVI~~~d--~~~~r~~In~~c~~~~ip~I 235 (236)
....... .+. -.+..++|..+. +.+....+.+.|++.++.++
T Consensus 74 ~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 74 APFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4432222 222 245676555443 45666789999999988765
No 392
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=92.61 E-value=0.4 Score=40.51 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=51.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChH-HHHHHHHHHhhCCCceEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNR-AKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~K-aea~~~~L~~inp~v~I~~ 191 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+.-...+. ...+-..|+..+. ++.+.+.+.+....+.+-+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYR-VVATSRSIKPSADP---DIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCCCCSST---TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChhhcccC---ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 4557889998 569999999999999985 77777664333333 2233346776654 4555566666655666666
Q ss_pred Eec
Q psy9587 192 NET 194 (236)
Q Consensus 192 ~~~ 194 (236)
+..
T Consensus 102 ~nA 104 (260)
T 3un1_A 102 NNA 104 (260)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
No 393
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=92.61 E-value=0.11 Score=47.18 Aligned_cols=38 Identities=13% Similarity=0.089 Sum_probs=32.8
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|+.++..+|...
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~ 198 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQA 198 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSC
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCc
Confidence 56788999999999999999999999986688888543
No 394
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=92.60 E-value=0.14 Score=45.37 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=31.3
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+..++|+|||+|.+|..+|+.|...|. ++..+|..
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~ 176 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHART 176 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4677899999999999999999999997 47777754
No 395
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=92.58 E-value=0.56 Score=39.49 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=28.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~ 40 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDIL 40 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 4557889999 569999999999999974 7776643
No 396
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.58 E-value=0.3 Score=43.43 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=29.5
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|..++..+|.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 224 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 224 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 3468999999999999999999999988888774
No 397
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.57 E-value=0.1 Score=46.50 Aligned_cols=35 Identities=20% Similarity=-0.036 Sum_probs=29.2
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++..+|+|||+|.+|+.++..|...|+ +++++|.+
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~ 48 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRS 48 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCT
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEECC
Confidence 345679999999999999999999997 47777754
No 398
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=92.57 E-value=0.076 Score=46.86 Aligned_cols=92 Identities=7% Similarity=-0.115 Sum_probs=51.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETKV 196 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~l 196 (236)
.+|+|||+|++|...+..| ..|+.-+.++|.+.- .+++.+++...+....++ .+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~-------------------~~~~~~~~~~~~~~~~~~--~~---- 56 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPE-------------------EDLSKLEKAISEMNIKPK--KY---- 56 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTT-------------------CCCHHHHHHHHTTTCCCE--EC----
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCch-------------------hhHHHHHHHHHHcCCCCc--cc----
Confidence 4789999999999888877 445554556664321 012233444444332111 11
Q ss_pred Ccchhhhc--CCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 197 DEISEEFV--HGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 197 ~~~~~~~l--~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++ -.+++ .+.|+|+.|+.+ .....+...|.+.|+++++
T Consensus 57 ~~-~~~ll~~~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl~ 96 (337)
T 3ip3_A 57 NN-WWEMLEKEKPDILVINTVF-SLNGKILLEALERKIHAFV 96 (337)
T ss_dssp SS-HHHHHHHHCCSEEEECSSH-HHHHHHHHHHHHTTCEEEE
T ss_pred CC-HHHHhcCCCCCEEEEeCCc-chHHHHHHHHHHCCCcEEE
Confidence 11 12333 357888888754 3445566667777887763
No 399
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=92.55 E-value=0.38 Score=42.37 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=52.4
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+.++|+|.|+ ||+|.++++.|+..|.. +.+.+.+.. . ....+.+.+++.+..... ++..+.
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~-V~~~~r~~~------~---------r~~~~~~~l~~~~~~~~~--~~~~~~ 65 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHR-VYASMRDIV------G---------RNASNVEAIAGFARDNDV--DLRTLE 65 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCTT------T---------TTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEecCccc------c---------cCHHHHHHHHHHHHhcCC--cEEEEE
Confidence 3467888884 79999999999999986 444443321 1 122355666666666544 455666
Q ss_pred cCCCcch--hhh-------cCCCcEEEEcCC
Q psy9587 194 TKVDEIS--EEF-------VHGFDVVIATSC 215 (236)
Q Consensus 194 ~~l~~~~--~~~-------l~~~DlVI~~~d 215 (236)
.++++.. .+. +...|++|.+..
T Consensus 66 ~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 66 LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6665422 222 347899998764
No 400
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=92.53 E-value=0.12 Score=51.25 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=30.6
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
...+|.|||+|..|+-+|..++.+|+. ++|+|.+.
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~-V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGIS-VVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCE-EEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCc-hhcccchH
Confidence 467899999999999999999999987 78888543
No 401
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=92.52 E-value=0.21 Score=44.14 Aligned_cols=89 Identities=10% Similarity=-0.138 Sum_probs=50.9
Q ss_pred cceEEEEcCC-hhHHHHHHHHHHh--CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEE
Q psy9587 116 IYVYSTGPLT-RVGAEIAKNIILS--GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSN 192 (236)
Q Consensus 116 ~~~VlIVG~G-gvGsevak~La~~--GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~ 192 (236)
..+|+||||| .+|...+..|... ++.-+.++|.+. .|++.++++. +..+ .+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~--------------------~~~~~~a~~~----~~~~--~~ 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTR--------------------SHAEEFAKMV----GNPA--VF 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSH--------------------HHHHHHHHHH----SSCE--EE
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCH--------------------HHHHHHHHHh----CCCc--cc
Confidence 3579999999 7999999999876 333334555321 2344444332 1111 11
Q ss_pred ecCCCcchhhhc--CCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 193 ETKVDEISEEFV--HGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 193 ~~~l~~~~~~~l--~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++ -.+++ .+.|+|+.|+.+.. ...+...|.+.|+++++
T Consensus 72 ----~~-~~~ll~~~~vD~V~i~tp~~~-H~~~~~~al~aGkhVl~ 111 (340)
T 1zh8_A 72 ----DS-YEELLESGLVDAVDLTLPVEL-NLPFIEKALRKGVHVIC 111 (340)
T ss_dssp ----SC-HHHHHHSSCCSEEEECCCGGG-HHHHHHHHHHTTCEEEE
T ss_pred ----CC-HHHHhcCCCCCEEEEeCCchH-HHHHHHHHHHCCCcEEE
Confidence 11 12333 35888888885533 34445566777877763
No 402
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=92.51 E-value=0.59 Score=38.81 Aligned_cols=32 Identities=22% Similarity=0.130 Sum_probs=26.0
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEee
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD 147 (236)
+.++|+|.| .||+|.++++.|+..|.. +.+++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~ 35 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGAN-VVVNY 35 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEe
Confidence 456788888 569999999999999975 66655
No 403
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.51 E-value=0.34 Score=45.43 Aligned_cols=88 Identities=14% Similarity=0.043 Sum_probs=54.2
Q ss_pred ccceEEEEcCChhHHH-HHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGAE-IAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGse-vak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+.++|.|||.|++|-. +|+.|...|.. ++..|... . ...+.|++. .+++. .
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~-V~~~D~~~-------~----------------~~~~~l~~~--gi~~~--~ 72 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQ-ISGSDLAP-------N----------------SVTQHLTAL--GAQIY--F 72 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCE-EEEECSSC-------C----------------HHHHHHHHT--TCEEE--S
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCe-EEEEECCC-------C----------------HHHHHHHHC--CCEEE--C
Confidence 3468999999999985 89999999986 77777321 0 123345554 34432 2
Q ss_pred cCCCcchhhhcCCCcEEEEcCCCHHHHHHHHHHHHHcCCcEE
Q psy9587 194 TKVDEISEEFVHGFDVVIATSCNPNQLIKIDDFCRSKSKISL 235 (236)
Q Consensus 194 ~~l~~~~~~~l~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I 235 (236)
+ ...+.+.++|+||.+..-+...-. -..+++.|+|++
T Consensus 73 g----~~~~~~~~~d~vV~Spgi~~~~p~-~~~a~~~gi~v~ 109 (494)
T 4hv4_A 73 H----HRPENVLDASVVVVSTAISADNPE-IVAAREARIPVI 109 (494)
T ss_dssp S----CCGGGGTTCSEEEECTTSCTTCHH-HHHHHHTTCCEE
T ss_pred C----CCHHHcCCCCEEEECCCCCCCCHH-HHHHHHCCCCEE
Confidence 2 233456789999987532211112 234677888875
No 404
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=92.51 E-value=0.6 Score=41.64 Aligned_cols=33 Identities=15% Similarity=-0.027 Sum_probs=22.9
Q ss_pred cceEEEEcCChhHHH-HHHHHHHh-CCceEEEeeC
Q psy9587 116 IYVYSTGPLTRVGAE-IAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 116 ~~~VlIVG~GgvGse-vak~La~~-GVg~I~LvD~ 148 (236)
..+|+|||+|.+|.. .+..|... |+.-..++|.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~ 41 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR 41 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence 357899999999986 67777654 4443345553
No 405
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.50 E-value=0.13 Score=45.09 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=28.1
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|. ++..+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~ 198 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDI 198 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 45689999999999999999999999 6777663
No 406
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.50 E-value=0.13 Score=45.22 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=30.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCccc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVVT 152 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~Ve 152 (236)
..|+|||+|.+|+.+|..|++.|.. ++|+|...+-
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~-V~lle~~~~~ 40 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEE-VTVIEKRFIG 40 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCCCC
Confidence 4689999999999999999999985 9999987543
No 407
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=92.49 E-value=0.36 Score=43.07 Aligned_cols=90 Identities=9% Similarity=0.083 Sum_probs=52.8
Q ss_pred ccceEEEEcCChhHH-HHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 115 KIYVYSTGPLTRVGA-EIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 115 k~~~VlIVG~GgvGs-evak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
+..+|+|||+|.+|. ..+..|...|+.-+.++|.+. .|++.++++ ++.+.+ +
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~--------------------~~a~~~a~~----~~~~~~--~- 77 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDD--------------------ALAAEFSAV----YADARR--I- 77 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCH--------------------HHHHHHHHH----SSSCCE--E-
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCH--------------------HHHHHHHHH----cCCCcc--c-
Confidence 346899999999885 467777777776566666332 233333332 222211 1
Q ss_pred cCCCcchhhhcC--CCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 194 TKVDEISEEFVH--GFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 194 ~~l~~~~~~~l~--~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
++ -.++++ +.|+|+.|+.+. ....+...|.+.|+++++
T Consensus 78 ---~~-~~~ll~~~~vD~V~I~tp~~-~H~~~~~~al~aGkhVl~ 117 (361)
T 3u3x_A 78 ---AT-AEEILEDENIGLIVSAAVSS-ERAELAIRAMQHGKDVLV 117 (361)
T ss_dssp ---SC-HHHHHTCTTCCEEEECCCHH-HHHHHHHHHHHTTCEEEE
T ss_pred ---CC-HHHHhcCCCCCEEEEeCChH-HHHHHHHHHHHCCCeEEE
Confidence 11 134443 488988887654 445555667778888764
No 408
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.44 E-value=0.12 Score=44.34 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=28.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 47899999999999999999997 588888654
No 409
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=92.44 E-value=0.13 Score=46.10 Aligned_cols=34 Identities=21% Similarity=0.124 Sum_probs=30.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..|+|||+|..|..+|..|++.|+.+++|+|...
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5689999999999999999999997699998653
No 410
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=92.43 E-value=0.14 Score=45.78 Aligned_cols=37 Identities=16% Similarity=-0.032 Sum_probs=32.2
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|.. +..+|...
T Consensus 142 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~-V~~~d~~~ 178 (333)
T 1dxy_A 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGAK-VIAYDPYP 178 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCc
Confidence 57788999999999999999999999975 77888654
No 411
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.43 E-value=0.12 Score=44.51 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=29.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
..|+|||+|..|..+|..|++.|. +++|+|.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~-~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGH-EVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 468999999999999999999998 48999976
No 412
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=92.43 E-value=0.61 Score=39.88 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=25.0
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+|+|.| .|.+|+.+++.|+..|. +++++|.
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVDEGL-SVVVVDN 33 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 588898 58999999999999995 5777664
No 413
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=92.39 E-value=0.43 Score=42.45 Aligned_cols=86 Identities=14% Similarity=0.076 Sum_probs=47.8
Q ss_pred cceEEEEcCChhHHH-HHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEe
Q psy9587 116 IYVYSTGPLTRVGAE-IAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNE 193 (236)
Q Consensus 116 ~~~VlIVG~GgvGse-vak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~ 193 (236)
..+|+|||+|.+|.. .+..|... |+.-+.++|.+. .| +.+..+.+++ +
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~--------------------~~-------~~~~~~~~~~--~- 54 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRT--------------------EE-------VKRDFPDAEV--V- 54 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCH--------------------HH-------HHHHCTTSEE--E-
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCH--------------------HH-------HHhhCCCCce--E-
Confidence 357899999999986 67777654 443334555332 01 2223333332 1
Q ss_pred cCCCcchhhhcC--CCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 194 TKVDEISEEFVH--GFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 194 ~~l~~~~~~~l~--~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
.. -.+++. +.|+|+.|+.+.. ...+...|.+.|+++++
T Consensus 55 ~~----~~~ll~~~~vD~V~i~tp~~~-H~~~~~~al~aGkhVl~ 94 (358)
T 3gdo_A 55 HE----LEEITNDPAIELVIVTTPSGL-HYEHTMACIQAGKHVVM 94 (358)
T ss_dssp SS----THHHHTCTTCCEEEECSCTTT-HHHHHHHHHHTTCEEEE
T ss_pred CC----HHHHhcCCCCCEEEEcCCcHH-HHHHHHHHHHcCCeEEE
Confidence 11 123443 6788888876533 23444556677777764
No 414
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=92.37 E-value=0.76 Score=38.41 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=25.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 34 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFD-IAVADL 34 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCE-EEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 5678888 569999999999999975 667663
No 415
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.37 E-value=0.12 Score=46.01 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=31.5
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+...+|+|||+|.+|..+|+.|...|.. +.++|.+
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~-V~~~d~~ 187 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQ-RFLYTGR 187 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCC-EEEEESS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCC
Confidence 46778999999999999999999999984 8888854
No 416
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.36 E-value=0.37 Score=42.30 Aligned_cols=34 Identities=9% Similarity=-0.133 Sum_probs=28.3
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..++..+...|..++..+|.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~ 204 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL 204 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3468999999999999998888887777888774
No 417
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=92.36 E-value=0.85 Score=38.83 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=27.1
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~-V~~~~r 55 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYR-VVIHYH 55 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCE-EEEEES
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe-EEEEeC
Confidence 4557788998 569999999999999975 777663
No 418
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.35 E-value=0.14 Score=44.47 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=30.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..|+|||+|..|..+|..|++.|..+++|+|.+.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 5689999999999999999999975799999774
No 419
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.33 E-value=0.14 Score=44.46 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=27.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+|+|||+|.+|+.++..|+..|. .++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 58899999999999999999996 6888886
No 420
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=92.33 E-value=0.15 Score=45.56 Aligned_cols=37 Identities=19% Similarity=-0.002 Sum_probs=32.0
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|...
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~-V~~~d~~~ 179 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGAT-VIGEDVFE 179 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCc
Confidence 46788999999999999999999999975 77778643
No 421
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.32 E-value=0.14 Score=45.22 Aligned_cols=33 Identities=24% Similarity=0.055 Sum_probs=28.7
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
..++|.|||+|..|+.+|.+|+ +|. .++++|.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~ 43 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVS 43 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECC
Confidence 4578999999999999999999 998 58898865
No 422
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=92.31 E-value=0.32 Score=45.20 Aligned_cols=37 Identities=27% Similarity=0.120 Sum_probs=32.7
Q ss_pred ccccceEEEEcCChhHHHHHHHHHH-hCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIIL-SGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~-~GVg~I~LvD~D 149 (236)
.++.++|.|.|.|.+|..+++.|.. .|..-+.+.|.+
T Consensus 206 ~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 206 DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4677899999999999999999999 999988888843
No 423
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.29 E-value=0.61 Score=40.26 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=27.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r 58 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGR 58 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 3557788888 569999999999999975 777663
No 424
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=92.28 E-value=0.17 Score=45.47 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=31.9
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|.. +..+|...
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~~-V~~~d~~~ 174 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMK-VLCYDVVK 174 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcCE-EEEECCCc
Confidence 57788999999999999999999999974 77777543
No 425
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=92.28 E-value=0.66 Score=39.37 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=26.9
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEee
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD 147 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.+.|
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~ 59 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAK-VAVNY 59 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEe
Confidence 46678899995 69999999999999986 55544
No 426
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=92.27 E-value=0.21 Score=45.03 Aligned_cols=87 Identities=9% Similarity=-0.021 Sum_probs=49.5
Q ss_pred ceEEEEcCC-hhHHHHHHHHHHh-CCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 117 YVYSTGPLT-RVGAEIAKNIILS-GVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 117 ~~VlIVG~G-gvGsevak~La~~-GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.+|+|||+| .+|...+..|... ++.-+.++|.+ ..|++.++++. .+. .+ .
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~--------------------~~~~~~~a~~~-----g~~--~~-~ 54 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPN--------------------EDVRERFGKEY-----GIP--VF-A 54 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSC--------------------HHHHHHHHHHH-----TCC--EE-S
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCC--------------------HHHHHHHHHHc-----CCC--eE-C
Confidence 578999999 8898899998875 33334455532 12344444332 222 11 1
Q ss_pred CCCcchhhhc--CCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 195 KVDEISEEFV--HGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 195 ~l~~~~~~~l--~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
. -.+++ .+.|+|+.|+.+.. ...+...|.+.|+++++
T Consensus 55 ~----~~ell~~~~vD~V~i~tp~~~-H~~~~~~al~aGk~Vl~ 93 (387)
T 3moi_A 55 T----LAEMMQHVQMDAVYIASPHQF-HCEHVVQASEQGLHIIV 93 (387)
T ss_dssp S----HHHHHHHSCCSEEEECSCGGG-HHHHHHHHHHTTCEEEE
T ss_pred C----HHHHHcCCCCCEEEEcCCcHH-HHHHHHHHHHCCCceee
Confidence 1 12333 35788888876533 23444566677777653
No 427
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=92.26 E-value=0.51 Score=40.71 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=27.8
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r 66 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGAT-IVFNDI 66 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4567889999 569999999999999975 667663
No 428
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.26 E-value=0.14 Score=41.64 Aligned_cols=31 Identities=10% Similarity=0.028 Sum_probs=26.8
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|+| +|.+|+.+++.|+..|. +++++|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 578999 99999999999999996 58887743
No 429
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.26 E-value=0.14 Score=45.80 Aligned_cols=33 Identities=21% Similarity=-0.012 Sum_probs=29.2
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
..+|.|||+|..|+-+|..++.+|.. ++|+|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECC
Confidence 35799999999999999999999987 8898865
No 430
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.23 E-value=0.29 Score=41.35 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=27.3
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 38 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAK-VTITGR 38 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeC
Confidence 3456788888 579999999999999974 777663
No 431
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=92.23 E-value=0.32 Score=40.22 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=27.4
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~r 37 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGAT-VVGTAT 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeC
Confidence 3557889998 569999999999999975 666663
No 432
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.23 E-value=0.15 Score=45.22 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=30.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVV 151 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~V 151 (236)
.-|+|||+|.+|..+|..|++.|.. ++|+|....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~-V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHR-VLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCCC
Confidence 4689999999999999999999985 899997654
No 433
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.23 E-value=0.14 Score=44.89 Aligned_cols=31 Identities=13% Similarity=-0.125 Sum_probs=26.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|+|+|++|+.++..|+ .|. .+++++.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTS-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCC-ceEEEECC
Confidence 36899999999999999999 874 57777743
No 434
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.21 E-value=0.13 Score=44.64 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=29.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|+|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCH
Confidence 468999999999999999999997 588888654
No 435
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.21 E-value=0.18 Score=47.40 Aligned_cols=35 Identities=14% Similarity=0.093 Sum_probs=30.5
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
...+|.|||+|..|+.+|..|+.+|. .++++|.+.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 44689999999999999999999998 588988653
No 436
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.20 E-value=0.62 Score=39.53 Aligned_cols=34 Identities=12% Similarity=0.079 Sum_probs=27.5
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 38 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGR 38 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeC
Confidence 3556788888 569999999999999975 777664
No 437
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=92.19 E-value=0.63 Score=38.96 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=26.7
Q ss_pred ccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
+.++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 36 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGAD-IVLNGF 36 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCE-EEEEeC
Confidence 456788888 569999999999999975 666653
No 438
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.17 E-value=0.11 Score=46.23 Aligned_cols=33 Identities=15% Similarity=0.004 Sum_probs=29.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~-~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGF-KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 568999999999999999999999 599999875
No 439
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=92.14 E-value=0.65 Score=39.86 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=54.8
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChH-HHHHHHHHHhhCCCceEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNR-AKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~K-aea~~~~L~~inp~v~I~ 190 (236)
+++.++++|.|+ +|+|.++|+.|+..|.. +.+.|.+.- +.+ ... ++-..|+.... ++.+.+.+.+.+..+.+-
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~--~~~-~~~-~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil 82 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQ-VLTTARARP--EGL-PEE-LFVEADLTTKEGCAIVAEATRQRLGGVDVI 82 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCE-EEEEESSCC--TTS-CTT-TEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCE-EEEEECCch--hCC-CcE-EEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467889999995 49999999999999986 667776532 344 333 44567887654 666777777777767766
Q ss_pred EEe
Q psy9587 191 SNE 193 (236)
Q Consensus 191 ~~~ 193 (236)
+.+
T Consensus 83 Vnn 85 (261)
T 4h15_A 83 VHM 85 (261)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 440
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=92.14 E-value=0.14 Score=45.45 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=30.9
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.+..++|+|||+|.+|..+|+.|...|. ++..+|.
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDT 177 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECC
Confidence 4677899999999999999999998886 5888886
No 441
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.13 E-value=1.2 Score=39.38 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=55.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEecC
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNETK 195 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~~ 195 (236)
.+|+|.| .|.+|..+++.|+..|. ++++++.+. . +.+ ++.+.. .+ .++....+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------~-----------~~~----~~~l~~-~~--~v~~v~~D 59 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSL-------K-----------GLI----AEELQA-IP--NVTLFQGP 59 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCS-------C-----------SHH----HHHHHT-ST--TEEEEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC-------C-----------hhh----HHHHhh-cC--CcEEEECC
Confidence 5689999 58999999999999885 466655321 0 001 122222 12 34555666
Q ss_pred -CCcch--hhhcCCCcEEEEcCCC------HHHHHHHHHHHHHcC-C-cEE
Q psy9587 196 -VDEIS--EEFVHGFDVVIATSCN------PNQLIKIDDFCRSKS-K-ISL 235 (236)
Q Consensus 196 -l~~~~--~~~l~~~DlVI~~~d~------~~~r~~In~~c~~~~-i-p~I 235 (236)
+++.. .+.++++|+||.+... ... ..+.+.|++.+ + .+|
T Consensus 60 ~l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~-~~l~~aa~~~g~v~~~V 109 (352)
T 1xgk_A 60 LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIG-KDLADAAKRAGTIQHYI 109 (352)
T ss_dssp CTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHH-HHHHHHHHHHSCCSEEE
T ss_pred ccCCHHHHHHHHhcCCEEEEcCCCCCcHHHHHH-HHHHHHHHHcCCccEEE
Confidence 65432 4567889999866532 233 56677777777 5 444
No 442
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=92.13 E-value=0.88 Score=40.50 Aligned_cols=23 Identities=22% Similarity=0.037 Sum_probs=20.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHh
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILS 138 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~ 138 (236)
..+|.|+|||.+|+.+++.|...
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~ 28 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSF 28 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhC
Confidence 35789999999999999999875
No 443
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=92.11 E-value=0.35 Score=44.30 Aligned_cols=79 Identities=10% Similarity=0.052 Sum_probs=54.0
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhCC-ce---EEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhC-CCc-e
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSGV-KS---VCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLN-PNV-E 188 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~GV-g~---I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~in-p~v-~ 188 (236)
..+|.|+| +|.||..++-.|+..|+ ++ |.|+|-|. +....|++..+-.|.... |.. .
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~----------------~~~~~~~~G~amDL~h~~~p~~~~ 95 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS----------------ERSFQALEGVAMELEDSLYPLLRE 95 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC----------------GGGHHHHHHHHHHHHTTTCTTEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCc----------------cchhhhhHHHHHhHHhhhhhhcCC
Confidence 35799999 79999999999999887 44 77766332 122345677777787765 442 2
Q ss_pred EEEEecCCCcchhhhcCCCcEEEEcCC
Q psy9587 189 VTSNETKVDEISEEFVHGFDVVIATSC 215 (236)
Q Consensus 189 I~~~~~~l~~~~~~~l~~~DlVI~~~d 215 (236)
+... ....+-++++|+||.+..
T Consensus 96 v~i~-----~~~y~~~~daDvVVitag 117 (375)
T 7mdh_A 96 VSIG-----IDPYEVFEDVDWALLIGA 117 (375)
T ss_dssp EEEE-----SCHHHHTTTCSEEEECCC
T ss_pred cEEe-----cCCHHHhCCCCEEEEcCC
Confidence 2222 124566899999998865
No 444
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.09 E-value=0.13 Score=45.37 Aligned_cols=33 Identities=12% Similarity=0.002 Sum_probs=28.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+|++|..+++.+...|. ++..+|.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~ 196 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDI 196 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeC
Confidence 34689999999999999999999998 6777663
No 445
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=92.09 E-value=0.22 Score=44.10 Aligned_cols=33 Identities=12% Similarity=-0.048 Sum_probs=23.6
Q ss_pred ceEEEEcCChhHHH-HHHHHHHh-CCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAE-IAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGse-vak~La~~-GVg~I~LvD~D 149 (236)
.+|+|||+|.+|.. .+..|... |+.-..++|.+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~ 42 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSD 42 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCC
Confidence 57899999999986 77777655 44433455643
No 446
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=92.09 E-value=0.18 Score=44.55 Aligned_cols=36 Identities=14% Similarity=0.064 Sum_probs=31.3
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|..
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~-V~~~dr~ 156 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQ-VRGFSRT 156 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCE-EEEECSS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCE-EEEECCC
Confidence 46778999999999999999999999974 7777754
No 447
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.09 E-value=0.16 Score=43.64 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=28.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 118 VYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 118 ~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+|+|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCH
Confidence 68999999999999999999997 588888653
No 448
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.07 E-value=0.14 Score=45.17 Aligned_cols=33 Identities=12% Similarity=0.090 Sum_probs=29.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC---ceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV---KSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV---g~I~LvD~D 149 (236)
-+|.|||+|.+|+.++..|+..|+ ..++++|.+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 468999999999999999999995 678888865
No 449
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=92.07 E-value=0.46 Score=40.37 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=50.7
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChH-HHHHHHHHHhhCCCceEEE
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNR-AKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~K-aea~~~~L~~inp~v~I~~ 191 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-....+......+-..|+.... ++.+.+.+.+....+.+-+
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHP-LLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 35578889985 69999999999999985 777776533222220112233345776543 4555666666666666666
Q ss_pred EecC
Q psy9587 192 NETK 195 (236)
Q Consensus 192 ~~~~ 195 (236)
+...
T Consensus 93 nnAg 96 (266)
T 3p19_A 93 NNAG 96 (266)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 5443
No 450
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=92.06 E-value=0.13 Score=46.13 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=31.6
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|.. +.++|.+.
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~-V~~~dr~~ 197 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCP-ISYFSRSK 197 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCC-EEEECSSC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCc
Confidence 46778899999999999999999999974 77887543
No 451
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=92.06 E-value=0.86 Score=39.83 Aligned_cols=34 Identities=12% Similarity=0.210 Sum_probs=26.1
Q ss_pred cceEEEEcCChhHH-HHHHHHHHhCCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGA-EIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGs-evak~La~~GVg~I~LvD~D 149 (236)
..+|+|||+|.+|. ..+..|...|+.-+.++|.+
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~ 38 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESD 38 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSC
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCC
Confidence 35789999999986 57788876777656787854
No 452
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.03 E-value=0.18 Score=46.27 Aligned_cols=38 Identities=11% Similarity=-0.127 Sum_probs=33.1
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCcc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGVV 151 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~V 151 (236)
.+...+|+|+|+|.+|..+++.+...|. +++++|...-
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~ 218 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPE 218 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGG
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4566899999999999999999999998 5999997643
No 453
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=92.02 E-value=0.19 Score=44.55 Aligned_cols=31 Identities=3% Similarity=0.065 Sum_probs=23.4
Q ss_pred ceEEEEcCChhHHHHHHHHHH--hCCceEEEee
Q psy9587 117 YVYSTGPLTRVGAEIAKNIIL--SGVKSVCLLD 147 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~--~GVg~I~LvD 147 (236)
.+|+|||+|.+|..+++.|.. .|+.-..++|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d 37 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVG 37 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEe
Confidence 578999999999999999976 2343334455
No 454
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.00 E-value=0.16 Score=44.67 Aligned_cols=32 Identities=16% Similarity=0.051 Sum_probs=28.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|.|||+|..|+.++..|+.+|. .++++|.+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGE-EVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 578999999999999999999996 58888754
No 455
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=92.00 E-value=0.52 Score=39.41 Aligned_cols=78 Identities=10% Similarity=-0.011 Sum_probs=46.6
Q ss_pred cccceEEEEcCC---hhHHHHHHHHHHhCCceEEEeeCCcccc---------cCCCCCccccCCCcCCChH-HHHHHHHH
Q psy9587 114 YKIYVYSTGPLT---RVGAEIAKNIILSGVKSVCLLDSGVVTK---------EDVNTAQFLAPHEDIGKNR-AKSSEARA 180 (236)
Q Consensus 114 lk~~~VlIVG~G---gvGsevak~La~~GVg~I~LvD~D~Ve~---------sNL~~rq~l~~~~dIGk~K-aea~~~~L 180 (236)
++.++|+|.|++ |+|.++++.|+..|.. +.++|.+.-.. ... +.+..+-..|+.... ++.+.+.+
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAA-VAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCE-EEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe-EEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHHH
Confidence 466789999975 9999999999999986 55655433211 001 112233344555443 44555555
Q ss_pred HhhCCCceEEEEe
Q psy9587 181 QNLNPNVEVTSNE 193 (236)
Q Consensus 181 ~~inp~v~I~~~~ 193 (236)
.+....+.+-++.
T Consensus 96 ~~~~g~id~li~n 108 (267)
T 3gdg_A 96 VADFGQIDAFIAN 108 (267)
T ss_dssp HHHTSCCSEEEEC
T ss_pred HHHcCCCCEEEEC
Confidence 5555555555544
No 456
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=91.99 E-value=0.17 Score=44.99 Aligned_cols=35 Identities=23% Similarity=0.052 Sum_probs=30.8
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCc-eEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVK-SVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg-~I~LvD~D~ 150 (236)
.++|+|||.|.-|..+|..|.+.|-+ +|+|||...
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 46899999999999999999999875 799998654
No 457
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.99 E-value=0.78 Score=38.37 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=28.1
Q ss_pred cccceEEEEcCC---hhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPLT---RVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~G---gvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.|++ |+|.++++.|+..|.. +.++|.+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~ 42 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYAG 42 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESS
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecCc
Confidence 456789999964 3999999999999986 6666643
No 458
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=91.97 E-value=0.33 Score=43.16 Aligned_cols=34 Identities=12% Similarity=0.022 Sum_probs=25.5
Q ss_pred cceEEEEcCChhHHH-HHHHHHHh-CCceEEEeeCC
Q psy9587 116 IYVYSTGPLTRVGAE-IAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~GgvGse-vak~La~~-GVg~I~LvD~D 149 (236)
..+|+|||||.+|.. .+..|... |+.-..++|.+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~ 40 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS 40 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC
Confidence 467899999999996 77777765 55545577765
No 459
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=91.97 E-value=0.15 Score=45.98 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=31.1
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|||+|.+|..+|+.|...|+. +..+|..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~-V~~~d~~ 200 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFN-VLFYDPY 200 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCE-EEEECTT
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCE-EEEECCC
Confidence 46778999999999999999999999984 7777754
No 460
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=91.96 E-value=0.56 Score=39.18 Aligned_cols=79 Identities=20% Similarity=0.135 Sum_probs=46.7
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCC---CCccccCCCcCCChH-HHHHHHHHHhhCCCce
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVN---TAQFLAPHEDIGKNR-AKSSEARAQNLNPNVE 188 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~---~rq~l~~~~dIGk~K-aea~~~~L~~inp~v~ 188 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-....+. ..+..+-..|+.... ++.+.+.+.+....+.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGAT-VLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 45678899995 69999999999999986 777775543222220 122233345665543 4555555555555555
Q ss_pred EEEEe
Q psy9587 189 VTSNE 193 (236)
Q Consensus 189 I~~~~ 193 (236)
+-++.
T Consensus 84 ~lv~n 88 (257)
T 3tpc_A 84 GLVNC 88 (257)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55554
No 461
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=91.96 E-value=0.68 Score=43.67 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=53.8
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
..+|+|.| .|+||.++++.|+..|..++.+++...-.. ++.+.+.+.|... ..++..+..
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~-----------------~~~~~l~~~l~~~--g~~v~~~~~ 319 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEA-----------------PGAAELAEELRGH--GCEVVHAAC 319 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGS-----------------TTHHHHHHHHHTT--TCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCccc-----------------HHHHHHHHHHHhc--CCEEEEEEe
Confidence 46788888 789999999999999998898877432111 1233445555553 356777777
Q ss_pred CCCcch--hhhcC--CCcEEEEcCC
Q psy9587 195 KVDEIS--EEFVH--GFDVVIATSC 215 (236)
Q Consensus 195 ~l~~~~--~~~l~--~~DlVI~~~d 215 (236)
++.+.. ..++. ..|+||.+..
T Consensus 320 Dvtd~~~v~~~~~~~~ld~VVh~AG 344 (511)
T 2z5l_A 320 DVAERDALAALVTAYPPNAVFHTAG 344 (511)
T ss_dssp CSSCHHHHHHHHHHSCCSEEEECCC
T ss_pred CCCCHHHHHHHHhcCCCcEEEECCc
Confidence 766532 33443 4888888753
No 462
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=91.92 E-value=0.46 Score=40.25 Aligned_cols=31 Identities=13% Similarity=0.008 Sum_probs=25.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHh--CCceEEEeeC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILS--GVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~--GVg~I~LvD~ 148 (236)
.+|+|.|+ |.+|+++++.|+.. |. +++++|.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r 36 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTE-NVIASDI 36 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGG-GEEEEES
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCC-EEEEEcC
Confidence 46889996 89999999999998 54 5777664
No 463
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=91.92 E-value=0.5 Score=41.19 Aligned_cols=31 Identities=6% Similarity=-0.009 Sum_probs=22.4
Q ss_pred ceEEEEcCChhHH-HHHHHHHHh-CCceEEEeeC
Q psy9587 117 YVYSTGPLTRVGA-EIAKNIILS-GVKSVCLLDS 148 (236)
Q Consensus 117 ~~VlIVG~GgvGs-evak~La~~-GVg~I~LvD~ 148 (236)
.+|+|||+|.+|. ..++.|... |+. ++++|.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~-l~v~d~ 35 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIE-LVLCTR 35 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEE-EEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCce-EEEEeC
Confidence 3689999999998 488988764 333 335554
No 464
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.90 E-value=0.17 Score=44.23 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=29.8
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+..+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 34578999999999999999999997 588888654
No 465
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=91.89 E-value=0.35 Score=43.16 Aligned_cols=31 Identities=16% Similarity=-0.030 Sum_probs=25.8
Q ss_pred ccceEEEEcC-ChhHHHHHHHHHHhCCceEEE
Q psy9587 115 KIYVYSTGPL-TRVGAEIAKNIILSGVKSVCL 145 (236)
Q Consensus 115 k~~~VlIVG~-GgvGsevak~La~~GVg~I~L 145 (236)
...+|+|+|+ |++|..++..+...|...|.+
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~ 195 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIAT 195 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 4568999999 899999999999999964444
No 466
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=91.88 E-value=0.35 Score=40.80 Aligned_cols=34 Identities=21% Similarity=0.148 Sum_probs=27.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r 66 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGAD-VAIWYN 66 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4557888998 569999999999999975 777664
No 467
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=91.87 E-value=0.16 Score=45.69 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=31.7
Q ss_pred ccccceEEEEcCChhHHHHHHHHH-HhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNII-LSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La-~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|. ..|. ++..+|.+.
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~ 197 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAP 197 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSC
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCC
Confidence 567789999999999999999999 8887 578888643
No 468
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=91.82 E-value=0.19 Score=47.05 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=30.6
Q ss_pred cceEEEEcCChhHHHHHHHHHH---hCCceEEEeeCCcc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIIL---SGVKSVCLLDSGVV 151 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~---~GVg~I~LvD~D~V 151 (236)
...|+|||+|..|+.+|..|++ .|+ +++|+|.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQA-NITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSC-EEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCC-EEEEECCCCC
Confidence 3579999999999999999999 898 5999997653
No 469
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=91.80 E-value=0.19 Score=45.53 Aligned_cols=36 Identities=14% Similarity=0.007 Sum_probs=31.4
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+..++|+|||+|.+|..+|+.|...|.. +..+|..
T Consensus 157 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~-V~~~d~~ 192 (352)
T 3gg9_A 157 VLKGQTLGIFGYGKIGQLVAGYGRAFGMN-VLVWGRE 192 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSH
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCE-EEEECCC
Confidence 46778999999999999999999999974 7777765
No 470
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=91.76 E-value=0.75 Score=38.83 Aligned_cols=75 Identities=17% Similarity=0.065 Sum_probs=47.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChH-HHHHHHHHHhhCCCceEEE
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNR-AKSSEARAQNLNPNVEVTS 191 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~K-aea~~~~L~~inp~v~I~~ 191 (236)
++.++|+|.| .||+|.++++.|+..|.. +.++|.+.-...++ .+-..|+.... ++.+.+.+.+....+.+-+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~-----~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv 79 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSK-VIDLSIHDPGEAKY-----DHIECDVTNPDQVKASIDHIFKEYGSISVLV 79 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESSCCCSCSS-----EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEecCcccCCce-----EEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4557788998 569999999999999984 77777653221111 23345776643 4445555555555566555
Q ss_pred Eec
Q psy9587 192 NET 194 (236)
Q Consensus 192 ~~~ 194 (236)
+..
T Consensus 80 ~~A 82 (264)
T 2dtx_A 80 NNA 82 (264)
T ss_dssp ECC
T ss_pred ECC
Confidence 543
No 471
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=91.76 E-value=0.29 Score=43.03 Aligned_cols=34 Identities=12% Similarity=-0.022 Sum_probs=28.4
Q ss_pred ceEEEEcCC-hhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLT-RVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~G-gvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+|+|||+| .+|...+..|...|+.-+.++|.+.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~ 38 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDIND 38 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSC
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCH
Confidence 578999995 5999999999999887777888663
No 472
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=91.74 E-value=0.062 Score=47.50 Aligned_cols=90 Identities=8% Similarity=-0.021 Sum_probs=51.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhC-Cc------eE-EEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCC
Q psy9587 115 KIYVYSTGPLTRVGAEIAKNIILSG-VK------SV-CLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPN 186 (236)
Q Consensus 115 k~~~VlIVG~GgvGsevak~La~~G-Vg------~I-~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~ 186 (236)
+..+|+|||||.+|..-+..+.... +. +| .+.|. ...+++.++++. +.
T Consensus 5 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--------------------~~~~a~~~a~~~----g~ 60 (390)
T 4h3v_A 5 TNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--------------------DAEAVRAAAGKL----GW 60 (390)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--------------------SHHHHHHHHHHH----TC
T ss_pred CcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--------------------CHHHHHHHHHHc----CC
Confidence 4578999999999998888876542 11 12 23332 223444444433 22
Q ss_pred ceEEEEecCCCcchhhhc--CCCcEEEEcCCCHHHHHHHHHHHHHcCCcEEC
Q psy9587 187 VEVTSNETKVDEISEEFV--HGFDVVIATSCNPNQLIKIDDFCRSKSKISLF 236 (236)
Q Consensus 187 v~I~~~~~~l~~~~~~~l--~~~DlVI~~~d~~~~r~~In~~c~~~~ip~I~ 236 (236)
.++ + ++ -.+++ .+.|+|+.|+.+.. ...+...|.+.|+++++
T Consensus 61 ~~~--~----~d-~~~ll~~~~iDaV~I~tP~~~-H~~~~~~al~aGkhVl~ 104 (390)
T 4h3v_A 61 STT--E----TD-WRTLLERDDVQLVDVCTPGDS-HAEIAIAALEAGKHVLC 104 (390)
T ss_dssp SEE--E----SC-HHHHTTCTTCSEEEECSCGGG-HHHHHHHHHHTTCEEEE
T ss_pred Ccc--c----CC-HHHHhcCCCCCEEEEeCChHH-HHHHHHHHHHcCCCcee
Confidence 111 1 11 12344 35899998886533 34555567788888764
No 473
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=91.74 E-value=0.85 Score=39.20 Aligned_cols=30 Identities=13% Similarity=-0.043 Sum_probs=24.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHHhCCceEEEee
Q psy9587 117 YVYSTGP-LTRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 117 ~~VlIVG-~GgvGsevak~La~~GVg~I~LvD 147 (236)
.+|+|.| +|.||+.+++.|+..|.. ++.++
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G~~-V~~~~ 40 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKGYA-VNTTV 40 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCE-EEEEE
Confidence 5789999 789999999999999975 44433
No 474
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=91.72 E-value=0.32 Score=42.19 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=29.7
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
++.++|+|.|+ ||||.++++.|+..|. ++.++|.+.
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 75 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSP 75 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSG
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 45678899985 6999999999999998 578887653
No 475
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=91.68 E-value=0.17 Score=45.69 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=31.9
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|...
T Consensus 170 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~-V~~~dr~~ 206 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAIATRARGFGLA-IHYHNRTR 206 (345)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHTTTCE-EEEECSSC
T ss_pred ccCCCEEEEEEeChhHHHHHHHHHHCCCE-EEEECCCC
Confidence 56778999999999999999999999984 77778654
No 476
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=91.67 E-value=0.54 Score=39.86 Aligned_cols=78 Identities=13% Similarity=0.089 Sum_probs=46.2
Q ss_pred cccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCccccc----CCCCCccccCCCcCCChH-HHHHHHHHHhhCCCc
Q psy9587 114 YKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKE----DVNTAQFLAPHEDIGKNR-AKSSEARAQNLNPNV 187 (236)
Q Consensus 114 lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~s----NL~~rq~l~~~~dIGk~K-aea~~~~L~~inp~v 187 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-... .+ +....+-..|+.... ++.+.+.+.+....+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGAR-VVLADLPETDLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSCHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 45678899995 69999999999999985 778876532211 11 122223334555432 344444444444445
Q ss_pred eEEEEe
Q psy9587 188 EVTSNE 193 (236)
Q Consensus 188 ~I~~~~ 193 (236)
.+-++.
T Consensus 87 d~lv~n 92 (271)
T 3tzq_B 87 DIVDNN 92 (271)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 554443
No 477
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=91.66 E-value=0.66 Score=38.15 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=27.7
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
++.++|+|.| .|++|.++++.|+..|.. +.++|.
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~-V~~~~r 38 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGR 38 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeC
Confidence 4557789998 569999999999999975 777664
No 478
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=91.65 E-value=0.22 Score=42.12 Aligned_cols=30 Identities=17% Similarity=0.046 Sum_probs=24.1
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 118 VYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 118 ~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
+|+|.|+ |.+|+.+++.|. .|. +++.+|.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~ 32 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVG-NLIALDVH 32 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTS-EEEEECTT
T ss_pred eEEEECCCCHHHHHHHHHhh-cCC-eEEEeccc
Confidence 4788996 899999999999 774 57776643
No 479
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.65 E-value=0.2 Score=41.91 Aligned_cols=33 Identities=15% Similarity=0.074 Sum_probs=29.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
..|+|||+|..|..+|..|++.|. +++|+|...
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARK-NILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 468999999999999999999997 699999653
No 480
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=91.64 E-value=0.31 Score=41.41 Aligned_cols=36 Identities=17% Similarity=0.051 Sum_probs=29.3
Q ss_pred ccccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~ 60 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAI-VGLHGTR 60 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 45678899999 469999999999999975 7777654
No 481
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=91.64 E-value=0.17 Score=45.10 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=30.0
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGI-DVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 3579999999999999999999998 589998653
No 482
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.64 E-value=0.12 Score=45.64 Aligned_cols=33 Identities=15% Similarity=-0.077 Sum_probs=28.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhCC------ceEEEeeCC
Q psy9587 117 YVYSTGPLTRVGAEIAKNIILSGV------KSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~GgvGsevak~La~~GV------g~I~LvD~D 149 (236)
.+|+|||+|.+|+.++..|+..|. .+++++|.+
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 368999999999999999999993 468888854
No 483
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.62 E-value=0.18 Score=46.20 Aligned_cols=36 Identities=11% Similarity=-0.146 Sum_probs=32.0
Q ss_pred cccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 114 YKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 114 lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
+...+|+|+|+|.+|..+++.+..+|. +++++|...
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~ 205 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRP 205 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 456899999999999999999999998 699999654
No 484
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.62 E-value=0.19 Score=43.12 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=28.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 117 YVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 117 ~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+|+|||+ |.+|+.+++.|+..|. +++++|.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 36899999 9999999999999996 68888854
No 485
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.62 E-value=0.061 Score=47.43 Aligned_cols=33 Identities=9% Similarity=0.026 Sum_probs=27.7
Q ss_pred ccceEEEEcCC-hhHHHHHHHHHHhCCceEEEeeC
Q psy9587 115 KIYVYSTGPLT-RVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 115 k~~~VlIVG~G-gvGsevak~La~~GVg~I~LvD~ 148 (236)
...+|+|+|+| ++|..++..+...|. ++..+|.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~ 177 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTR 177 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeC
Confidence 45689999998 899999999999999 5777663
No 486
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=91.60 E-value=0.46 Score=41.88 Aligned_cols=35 Identities=9% Similarity=-0.042 Sum_probs=26.8
Q ss_pred ccceEEEEcCChhHH-HHHHHHHHh-CCceEEEeeCC
Q psy9587 115 KIYVYSTGPLTRVGA-EIAKNIILS-GVKSVCLLDSG 149 (236)
Q Consensus 115 k~~~VlIVG~GgvGs-evak~La~~-GVg~I~LvD~D 149 (236)
+..+|+|||+|.+|. ..+..|... |+.-+.++|.+
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~ 60 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH 60 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence 446899999999998 688888875 55555666755
No 487
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=91.54 E-value=0.44 Score=40.07 Aligned_cols=35 Identities=9% Similarity=0.017 Sum_probs=28.5
Q ss_pred cccceEEEEcC---ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 114 YKIYVYSTGPL---TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG~---GgvGsevak~La~~GVg~I~LvD~D 149 (236)
++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEcCc
Confidence 34578899997 69999999999999975 7777644
No 488
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.54 E-value=0.2 Score=45.97 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=30.9
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDS 148 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~ 148 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|.
T Consensus 116 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~-V~~~d~ 150 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGSRLQTRLEALGIR-TLLCDP 150 (381)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTCE-EEEECH
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCCE-EEEECC
Confidence 46778999999999999999999999985 777775
No 489
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=91.51 E-value=0.93 Score=38.17 Aligned_cols=77 Identities=14% Similarity=0.106 Sum_probs=46.6
Q ss_pred cceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChHHHHHHHHHHhhCCCceEEEEec
Q psy9587 116 IYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNRAKSSEARAQNLNPNVEVTSNET 194 (236)
Q Consensus 116 ~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~Kaea~~~~L~~inp~v~I~~~~~ 194 (236)
.++|+|.| .||+|.++++.|+..|.. +.+.+. |. ..+.+.+.+.+.+..+ ++..+..
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~-V~~~~~----------~~---------~~~~~~~~~~~~~~~~--~~~~~~~ 83 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWR-VGVNYA----------AN---------REAADAVVAAITESGG--EAVAIPG 83 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEES----------SC---------HHHHHHHHHHHHHTTC--EEEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcC----------CC---------hhHHHHHHHHHHhcCC--cEEEEEc
Confidence 35788888 569999999999999987 444321 11 1234445555555433 5555555
Q ss_pred CCCcch--h-------hhcCCCcEEEEcC
Q psy9587 195 KVDEIS--E-------EFVHGFDVVIATS 214 (236)
Q Consensus 195 ~l~~~~--~-------~~l~~~DlVI~~~ 214 (236)
++.+.. . +.+...|+||.+.
T Consensus 84 Dl~~~~~v~~~~~~~~~~~g~id~li~nA 112 (272)
T 4e3z_A 84 DVGNAADIAAMFSAVDRQFGRLDGLVNNA 112 (272)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 655421 1 1234678888764
No 490
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=91.48 E-value=0.94 Score=38.46 Aligned_cols=33 Identities=24% Similarity=0.060 Sum_probs=26.3
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCCceEEEee
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD 147 (236)
++.++|+|.| .|++|.++++.|+..|.. +.+++
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~ 75 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSH-VICIS 75 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSE-EEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEc
Confidence 3556788998 569999999999999864 55555
No 491
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.48 E-value=0.21 Score=47.03 Aligned_cols=35 Identities=14% Similarity=-0.052 Sum_probs=30.8
Q ss_pred cceEEEEcCChhHHHHHHHHHH---hCCceEEEeeCCcc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIIL---SGVKSVCLLDSGVV 151 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~---~GVg~I~LvD~D~V 151 (236)
...|+|||+|..|..+|..|++ .|+ +++|+|.+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTA-DITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSS-EEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCC-cEEEEeCCCC
Confidence 4579999999999999999999 887 6999997654
No 492
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.47 E-value=0.21 Score=44.50 Aligned_cols=34 Identities=15% Similarity=-0.022 Sum_probs=29.8
Q ss_pred cceEEEEcCChhHHHHHHHHHHhCCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D~ 150 (236)
...|+|||+|..|..+|..|++.|+. ++|+|...
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~-v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVD-VDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCC-EEEEecCC
Confidence 35799999999999999999999984 88998654
No 493
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=91.46 E-value=0.65 Score=39.23 Aligned_cols=34 Identities=21% Similarity=0.073 Sum_probs=27.2
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEee
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLD 147 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD 147 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.+.|
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~ 49 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAK-VVVNY 49 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEc
Confidence 356678899995 59999999999999985 55544
No 494
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=91.42 E-value=1.4 Score=34.29 Aligned_cols=33 Identities=12% Similarity=0.047 Sum_probs=26.9
Q ss_pred cceEEEEcC----ChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 116 IYVYSTGPL----TRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 116 ~~~VlIVG~----GgvGsevak~La~~GVg~I~LvD~D 149 (236)
..+|+|||+ |..|..++++|...|.. +.-+++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~-v~~Vnp~ 58 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD-VYPVNPK 58 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECTT
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE-EEEECCC
Confidence 467899999 68999999999999994 5555554
No 495
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=91.39 E-value=0.54 Score=39.16 Aligned_cols=36 Identities=6% Similarity=-0.045 Sum_probs=28.4
Q ss_pred cccceEEEEc-CChhHHHHHHHHHHhCC--ceEEEeeCC
Q psy9587 114 YKIYVYSTGP-LTRVGAEIAKNIILSGV--KSVCLLDSG 149 (236)
Q Consensus 114 lk~~~VlIVG-~GgvGsevak~La~~GV--g~I~LvD~D 149 (236)
++.++|+|.| .|++|.++++.|+..|. .++.++|.+
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 3556788888 57999999999999995 568887743
No 496
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=91.39 E-value=0.8 Score=38.84 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=49.3
Q ss_pred ccccceEEEEcC-ChhHHHHHHHHHHhCCceEEEeeCCcccccCCCCCccccCCCcCCChH-HHHHHHHHHhhCCCceEE
Q psy9587 113 SYKIYVYSTGPL-TRVGAEIAKNIILSGVKSVCLLDSGVVTKEDVNTAQFLAPHEDIGKNR-AKSSEARAQNLNPNVEVT 190 (236)
Q Consensus 113 ~lk~~~VlIVG~-GgvGsevak~La~~GVg~I~LvD~D~Ve~sNL~~rq~l~~~~dIGk~K-aea~~~~L~~inp~v~I~ 190 (236)
.++.++|+|.|+ ||+|.++++.|+..|.. +.++|.+.-..... ..-..|+.... ++.+.+.+.+....+.+-
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l 98 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGAR-VAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGLGRLDIV 98 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 456678899995 69999999999999974 77877653322221 22245676543 445556666555556666
Q ss_pred EEecC
Q psy9587 191 SNETK 195 (236)
Q Consensus 191 ~~~~~ 195 (236)
++...
T Consensus 99 vnnAg 103 (266)
T 3uxy_A 99 VNNAG 103 (266)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65443
No 497
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=91.39 E-value=0.22 Score=44.48 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=26.2
Q ss_pred cceEEEEcCChhHHH-HHHHHHHh-CCceEEEeeCCc
Q psy9587 116 IYVYSTGPLTRVGAE-IAKNIILS-GVKSVCLLDSGV 150 (236)
Q Consensus 116 ~~~VlIVG~GgvGse-vak~La~~-GVg~I~LvD~D~ 150 (236)
..+|+|||+|.+|.. .+..|... |+.-+.++|.+.
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~ 41 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDL 41 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCH
Confidence 457999999999995 88988765 544445777654
No 498
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=91.38 E-value=0.14 Score=43.92 Aligned_cols=36 Identities=22% Similarity=0.112 Sum_probs=27.4
Q ss_pred ccccceEEEEc-CChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGP-LTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG-~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~ 66 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYS-VVITGRR 66 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECC
Confidence 45678899999 469999999999999985 7777754
No 499
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=91.38 E-value=0.21 Score=45.72 Aligned_cols=36 Identities=19% Similarity=0.166 Sum_probs=31.1
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.+..++|+|||+|.+|..+|+.|...|+. +..+|..
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~-V~~~d~~ 148 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGWK-VLVCDPP 148 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTCE-EEEECHH
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCCE-EEEEcCC
Confidence 46788999999999999999999999975 7777753
No 500
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=91.37 E-value=0.23 Score=45.17 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=31.7
Q ss_pred ccccceEEEEcCChhHHHHHHHHHHhCCceEEEeeCC
Q psy9587 113 SYKIYVYSTGPLTRVGAEIAKNIILSGVKSVCLLDSG 149 (236)
Q Consensus 113 ~lk~~~VlIVG~GgvGsevak~La~~GVg~I~LvD~D 149 (236)
.++.++|+|+|+|.||..+++.|...|.. +.+.|.+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~Gak-VvvsD~~ 207 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQ-LLVADTD 207 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 36788999999999999999999999985 5588865
Done!