Query psy959
Match_columns 109
No_of_seqs 162 out of 1022
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:33:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a0p_A LRP6, LRP-6, low-densit 99.9 7.1E-24 2.4E-28 162.3 14.6 102 3-107 413-516 (628)
2 3s94_A LRP-6, low-density lipo 99.9 1.6E-23 5.4E-28 160.1 15.9 103 3-108 416-519 (619)
3 3p5b_L Low density lipoprotein 99.9 8.1E-23 2.8E-27 149.0 16.1 103 3-108 183-286 (400)
4 3m0c_C LDL receptor, low-densi 99.9 8.9E-23 3E-27 159.6 15.8 103 3-108 495-598 (791)
5 3sov_A LRP-6, low-density lipo 99.9 1.3E-22 4.4E-27 144.2 15.1 102 3-107 103-205 (318)
6 3v64_C Agrin; beta propeller, 99.9 2.7E-22 9.1E-27 143.8 14.3 103 3-108 140-243 (349)
7 3s94_A LRP-6, low-density lipo 99.9 2.3E-22 7.9E-27 153.7 13.7 102 3-107 108-210 (619)
8 3v65_B Low-density lipoprotein 99.9 1.1E-21 3.8E-26 142.2 15.1 103 3-108 183-286 (386)
9 1ijq_A LDL receptor, low-densi 99.9 2.4E-21 8.3E-26 136.9 15.6 101 4-107 102-203 (316)
10 4a0p_A LRP6, LRP-6, low-densit 99.9 1.7E-21 5.9E-26 149.1 15.7 101 3-107 104-205 (628)
11 3m0c_C LDL receptor, low-densi 99.8 8.6E-20 2.9E-24 142.8 15.9 99 6-108 451-555 (791)
12 3v64_C Agrin; beta propeller, 99.8 9.2E-20 3.1E-24 130.6 14.7 99 5-107 99-199 (349)
13 3p5b_L Low density lipoprotein 99.8 2.6E-19 8.9E-24 130.4 15.1 99 6-108 139-243 (400)
14 3v65_B Low-density lipoprotein 99.8 2.3E-19 7.9E-24 130.0 14.7 100 5-108 142-243 (386)
15 3sov_A LRP-6, low-density lipo 99.8 5.6E-19 1.9E-23 125.5 15.1 100 5-108 61-163 (318)
16 1ijq_A LDL receptor, low-densi 99.8 1.6E-18 5.3E-23 122.5 15.9 99 6-108 57-161 (316)
17 1n7d_A LDL receptor, low-densi 99.8 7E-20 2.4E-24 141.5 9.2 102 3-107 477-579 (699)
18 1npe_A Nidogen, entactin; glyc 99.7 2.3E-16 7.9E-21 107.9 14.6 102 4-107 104-206 (267)
19 1npe_A Nidogen, entactin; glyc 99.7 4.8E-16 1.6E-20 106.4 15.6 99 5-107 62-163 (267)
20 1n7d_A LDL receptor, low-densi 99.7 4E-17 1.4E-21 126.1 5.5 98 6-107 433-536 (699)
21 3s25_A Hypothetical 7-bladed b 99.5 3.4E-14 1.2E-18 100.5 9.9 94 4-108 170-264 (302)
22 3s25_A Hypothetical 7-bladed b 99.5 6.9E-13 2.3E-17 93.7 12.0 92 3-107 209-301 (302)
23 3fvz_A Peptidyl-glycine alpha- 99.2 2.6E-10 8.8E-15 80.0 11.9 82 20-105 142-234 (329)
24 3tc9_A Hypothetical hydrolase; 99.2 2.4E-10 8.3E-15 83.8 11.2 79 18-100 223-302 (430)
25 3fvz_A Peptidyl-glycine alpha- 99.1 1.7E-09 6E-14 75.8 12.1 82 19-105 89-181 (329)
26 3tc9_A Hypothetical hydrolase; 99.1 2.1E-09 7.2E-14 78.8 12.4 99 5-105 163-263 (430)
27 4hw6_A Hypothetical protein, I 99.0 3.4E-09 1.2E-13 77.8 10.7 79 18-100 225-305 (433)
28 3hrp_A Uncharacterized protein 99.0 9.8E-09 3.3E-13 74.7 12.6 72 20-98 322-409 (409)
29 3kya_A Putative phosphatase; s 99.0 5.3E-09 1.8E-13 78.4 10.2 81 17-101 243-343 (496)
30 3hrp_A Uncharacterized protein 98.9 1.8E-08 6.1E-13 73.3 12.5 73 22-100 267-356 (409)
31 4hw6_A Hypothetical protein, I 98.9 3.4E-09 1.2E-13 77.8 7.9 73 20-98 334-432 (433)
32 3kya_A Putative phosphatase; s 98.8 4.6E-08 1.6E-12 73.4 10.6 78 19-101 370-477 (496)
33 1rwi_B Serine/threonine-protei 98.8 5.4E-08 1.8E-12 65.4 9.5 90 7-102 177-267 (270)
34 1rwi_B Serine/threonine-protei 98.8 8.7E-08 3E-12 64.3 10.5 81 18-104 147-227 (270)
35 1q7f_A NHL, brain tumor CG1071 98.8 1.9E-07 6.4E-12 63.5 12.1 92 8-105 107-200 (286)
36 1q7f_A NHL, brain tumor CG1071 98.7 3.9E-07 1.3E-11 61.8 12.2 93 7-105 148-244 (286)
37 2fp8_A Strictosidine synthase; 98.7 3.2E-07 1.1E-11 63.9 11.7 80 20-100 125-217 (322)
38 2ism_A Putative oxidoreductase 98.6 2.2E-07 7.4E-12 66.4 9.5 81 12-100 22-115 (352)
39 3a9g_A Putative uncharacterize 98.6 4E-07 1.4E-11 65.2 10.3 80 13-100 21-115 (354)
40 2qc5_A Streptogramin B lactona 98.6 1.1E-06 3.8E-11 59.3 11.7 91 7-103 131-222 (300)
41 2qc5_A Streptogramin B lactona 98.6 1.2E-06 4.2E-11 59.0 11.8 90 7-102 173-263 (300)
42 2fp8_A Strictosidine synthase; 98.6 8.1E-07 2.8E-11 61.8 11.0 85 14-105 178-275 (322)
43 3e5z_A Putative gluconolactona 98.5 3E-06 1E-10 57.9 12.7 86 9-101 16-102 (296)
44 2p4o_A Hypothetical protein; p 98.5 1.5E-06 5E-11 60.3 10.8 77 14-98 22-103 (306)
45 3g4e_A Regucalcin; six bladed 98.5 1.7E-06 5.9E-11 59.6 9.9 85 16-105 144-236 (297)
46 2z2n_A Virginiamycin B lyase; 98.4 5.8E-06 2E-10 55.7 11.8 89 7-101 126-215 (299)
47 2z2n_A Virginiamycin B lyase; 98.4 5.8E-06 2E-10 55.7 11.6 87 8-100 169-256 (299)
48 3dr2_A Exported gluconolactona 98.4 1.1E-05 3.6E-10 55.7 12.8 85 10-101 34-118 (305)
49 2qe8_A Uncharacterized protein 98.4 4.8E-06 1.6E-10 58.6 10.4 80 19-99 65-154 (343)
50 3dr2_A Exported gluconolactona 98.4 2.9E-06 9.8E-11 58.6 9.0 77 20-100 130-225 (305)
51 2p4o_A Hypothetical protein; p 98.3 6.5E-06 2.2E-10 57.0 10.1 74 19-101 167-244 (306)
52 2g8s_A Glucose/sorbosone dehyd 98.3 1.6E-06 5.6E-11 61.9 7.0 91 10-106 7-119 (353)
53 3das_A Putative oxidoreductase 98.3 1.4E-05 4.8E-10 57.5 11.2 83 12-99 23-116 (347)
54 1cru_A Protein (soluble quinop 98.2 1.2E-05 4.2E-10 59.4 10.5 89 12-106 18-135 (454)
55 3dsm_A Uncharacterized protein 98.2 5E-06 1.7E-10 58.2 7.6 78 21-105 225-308 (328)
56 3sre_A PON1, serum paraoxonase 98.2 5.1E-06 1.7E-10 59.9 7.6 77 19-99 163-252 (355)
57 2dg1_A DRP35, lactonase; beta 98.2 6.2E-05 2.1E-09 51.8 12.7 83 17-105 41-127 (333)
58 1pjx_A Dfpase, DIISOPROPYLFLUO 98.1 4.2E-05 1.4E-09 52.0 11.0 83 12-100 9-102 (314)
59 3a9g_A Putative uncharacterize 98.1 8.8E-06 3E-10 58.2 7.6 71 20-91 134-220 (354)
60 3qqz_A Putative uncharacterize 98.1 4.4E-05 1.5E-09 52.7 10.8 75 20-100 172-254 (255)
61 2p9w_A MAL S 1 allergenic prot 98.1 2.2E-05 7.4E-10 56.3 9.4 71 22-98 138-214 (334)
62 2g8s_A Glucose/sorbosone dehyd 98.1 1.6E-05 5.3E-10 56.8 8.7 77 12-89 114-218 (353)
63 3g4e_A Regucalcin; six bladed 98.0 0.00024 8.1E-09 48.7 13.2 83 15-106 6-89 (297)
64 2qe8_A Uncharacterized protein 98.0 8.5E-06 2.9E-10 57.3 5.9 63 21-90 248-312 (343)
65 2ism_A Putative oxidoreductase 98.0 4.9E-05 1.7E-09 54.1 9.8 80 19-99 73-178 (352)
66 3e5z_A Putative gluconolactona 98.0 0.00023 7.8E-09 48.4 12.6 82 15-105 166-252 (296)
67 2dg1_A DRP35, lactonase; beta 97.9 0.00027 9.3E-09 48.6 11.8 92 9-105 170-269 (333)
68 1pjx_A Dfpase, DIISOPROPYLFLUO 97.9 0.00015 5.2E-09 49.2 10.3 74 21-100 226-300 (314)
69 3dsm_A Uncharacterized protein 97.9 0.00023 7.8E-09 49.7 11.3 76 20-99 171-253 (328)
70 3sre_A PON1, serum paraoxonase 97.8 9.5E-05 3.3E-09 53.2 8.4 69 12-86 212-284 (355)
71 3vgz_A Uncharacterized protein 97.8 0.003 1E-07 43.1 15.4 79 20-102 88-176 (353)
72 2ghs_A AGR_C_1268P; regucalcin 97.8 0.00056 1.9E-08 47.6 11.4 83 17-104 175-265 (326)
73 3das_A Putative oxidoreductase 97.7 0.00013 4.5E-09 52.4 8.0 76 12-90 126-223 (347)
74 2ghs_A AGR_C_1268P; regucalcin 97.7 0.00049 1.7E-08 47.9 10.4 73 22-98 135-209 (326)
75 1cru_A Protein (soluble quinop 97.7 0.00019 6.4E-09 53.0 7.8 75 13-89 131-248 (454)
76 3qqz_A Putative uncharacterize 97.5 0.0029 9.8E-08 43.5 11.7 75 21-100 27-101 (255)
77 3scy_A Hypothetical bacterial 97.5 0.003 1E-07 43.8 12.1 74 22-99 156-242 (361)
78 3u4y_A Uncharacterized protein 97.5 0.01 3.4E-07 40.3 14.2 76 19-99 126-207 (331)
79 3hfq_A Uncharacterized protein 97.5 0.0028 9.5E-08 43.7 11.3 78 18-98 37-116 (347)
80 3vgz_A Uncharacterized protein 97.4 0.012 4.2E-07 40.1 14.3 75 21-100 185-263 (353)
81 3hfq_A Uncharacterized protein 97.4 0.0029 9.9E-08 43.6 10.7 73 22-98 241-316 (347)
82 1ri6_A Putative isomerase YBHE 97.4 0.0084 2.9E-07 40.6 12.8 76 18-97 35-113 (343)
83 3u4y_A Uncharacterized protein 97.4 0.0069 2.4E-07 41.1 12.3 77 19-101 174-254 (331)
84 1jof_A Carboxy-CIS,CIS-muconat 97.3 0.0083 2.8E-07 42.0 12.3 75 20-98 144-223 (365)
85 2p9w_A MAL S 1 allergenic prot 97.2 0.0058 2E-07 43.7 10.9 75 19-98 11-108 (334)
86 1l0q_A Surface layer protein; 97.2 0.023 7.9E-07 39.4 13.8 80 18-102 29-108 (391)
87 2iwa_A Glutamine cyclotransfer 97.2 0.0079 2.7E-07 41.6 11.2 73 21-98 21-94 (266)
88 3scy_A Hypothetical bacterial 97.2 0.013 4.4E-07 40.5 12.1 76 19-98 209-290 (361)
89 3amr_A 3-phytase; beta-propell 97.2 0.01 3.5E-07 42.8 11.6 77 21-102 180-266 (355)
90 3q6k_A 43.2 kDa salivary prote 97.1 0.015 5.1E-07 42.3 12.2 84 21-108 220-320 (381)
91 2iwa_A Glutamine cyclotransfer 97.1 0.0051 1.8E-07 42.5 9.1 73 22-100 153-238 (266)
92 1ri6_A Putative isomerase YBHE 97.1 0.019 6.6E-07 38.7 11.8 78 18-99 126-209 (343)
93 2ece_A 462AA long hypothetical 97.0 0.0076 2.6E-07 44.9 9.6 62 21-86 321-399 (462)
94 3nol_A Glutamine cyclotransfer 96.9 0.0057 2E-07 42.3 8.0 66 29-98 178-255 (262)
95 4a9v_A PHOX; hydrolase, beta-p 96.9 0.0043 1.5E-07 47.4 7.8 68 19-87 474-550 (592)
96 3mbr_X Glutamine cyclotransfer 96.8 0.013 4.5E-07 40.0 8.9 68 28-99 155-235 (243)
97 3q6k_A 43.2 kDa salivary prote 96.7 0.014 4.7E-07 42.4 9.2 62 24-90 278-345 (381)
98 3c75_H MADH, methylamine dehyd 96.7 0.02 6.9E-07 42.0 10.0 78 21-99 119-209 (426)
99 1pby_B Quinohemoprotein amine 96.7 0.072 2.5E-06 35.7 13.4 76 22-101 35-126 (337)
100 1jmx_B Amine dehydrogenase; ox 96.6 0.062 2.1E-06 36.3 11.8 74 22-99 44-134 (349)
101 3nok_A Glutaminyl cyclase; bet 96.6 0.0091 3.1E-07 41.5 7.4 65 29-97 187-264 (268)
102 3amr_A 3-phytase; beta-propell 96.6 0.053 1.8E-06 39.0 11.6 74 19-98 126-209 (355)
103 1l0q_A Surface layer protein; 96.6 0.094 3.2E-06 36.3 14.2 77 20-101 115-191 (391)
104 1jof_A Carboxy-CIS,CIS-muconat 96.6 0.021 7.2E-07 39.9 9.3 79 22-100 255-342 (365)
105 2wg3_C Hedgehog-interacting pr 96.6 0.0096 3.3E-07 44.1 7.8 82 13-99 6-115 (463)
106 1jmx_B Amine dehydrogenase; ox 96.5 0.042 1.4E-06 37.2 9.9 73 24-101 3-76 (349)
107 3bws_A Protein LP49; two-domai 96.4 0.12 3.9E-06 36.3 12.2 81 18-99 342-432 (433)
108 1qks_A Cytochrome CD1 nitrite 96.2 0.24 8.1E-06 37.5 13.6 72 21-97 197-273 (567)
109 2wg3_C Hedgehog-interacting pr 96.2 0.019 6.4E-07 42.6 7.2 65 22-87 140-242 (463)
110 2oiz_A Aromatic amine dehydrog 95.8 0.074 2.5E-06 37.4 8.8 77 21-98 51-139 (361)
111 2mad_H Methylamine dehydrogena 95.8 0.32 1.1E-05 34.5 13.9 77 21-99 67-156 (373)
112 1mda_H Methylamine dehydrogena 95.8 0.086 2.9E-06 37.8 9.0 73 21-94 66-151 (368)
113 3bws_A Protein LP49; two-domai 95.8 0.31 1E-05 34.1 13.3 75 21-100 303-391 (433)
114 2hqs_A Protein TOLB; TOLB, PAL 95.7 0.15 5.2E-06 36.4 10.1 80 23-106 313-394 (415)
115 1pby_B Quinohemoprotein amine 95.5 0.3 1E-05 32.6 12.9 76 22-101 83-165 (337)
116 2oiz_A Aromatic amine dehydrog 95.5 0.39 1.3E-05 33.7 11.6 70 25-99 258-334 (361)
117 1nir_A Nitrite reductase; hemo 95.5 0.52 1.8E-05 35.1 13.5 69 22-97 180-255 (543)
118 4a9v_A PHOX; hydrolase, beta-p 95.5 0.3 1E-05 37.5 11.4 87 19-106 382-525 (592)
119 3mbr_X Glutamine cyclotransfer 95.4 0.38 1.3E-05 32.7 11.2 69 24-98 24-93 (243)
120 2mad_H Methylamine dehydrogena 95.4 0.38 1.3E-05 34.1 11.3 76 23-100 266-351 (373)
121 3no2_A Uncharacterized protein 95.3 0.19 6.5E-06 34.1 9.3 76 22-105 126-202 (276)
122 3sjl_D Methylamine dehydrogena 95.3 0.28 9.6E-06 35.5 10.4 78 21-99 79-169 (386)
123 2ojh_A Uncharacterized protein 95.2 0.34 1.2E-05 31.4 10.8 87 13-105 34-125 (297)
124 3nok_A Glutaminyl cyclase; bet 95.2 0.29 9.8E-06 33.9 9.7 66 24-98 58-124 (268)
125 3no2_A Uncharacterized protein 95.2 0.4 1.4E-05 32.5 10.4 74 21-100 165-254 (276)
126 1nir_A Nitrite reductase; hemo 95.0 0.57 1.9E-05 34.9 11.7 74 22-99 281-355 (543)
127 3c75_H MADH, methylamine dehyd 95.0 0.12 4.2E-06 37.8 7.9 72 26-99 324-402 (426)
128 2ojh_A Uncharacterized protein 94.9 0.43 1.5E-05 30.9 10.1 84 20-106 172-265 (297)
129 2ece_A 462AA long hypothetical 94.6 0.4 1.4E-05 35.7 9.7 73 22-98 252-351 (462)
130 2hqs_A Protein TOLB; TOLB, PAL 94.3 0.94 3.2E-05 32.2 13.6 96 7-105 165-262 (415)
131 2gop_A Trilobed protease; beta 93.9 0.81 2.8E-05 30.9 9.6 80 21-102 59-164 (347)
132 3c5m_A Oligogalacturonate lyas 93.8 0.95 3.2E-05 31.0 9.9 85 21-105 188-279 (396)
133 3nol_A Glutamine cyclotransfer 93.6 1.2 3.9E-05 30.7 11.6 69 24-98 46-115 (262)
134 3azo_A Aminopeptidase; POP fam 93.5 0.71 2.4E-05 34.4 9.4 93 12-105 178-280 (662)
135 3pe7_A Oligogalacturonate lyas 93.3 0.52 1.8E-05 32.4 7.9 82 25-106 242-336 (388)
136 3sjl_D Methylamine dehydrogena 93.1 1.5 5.3E-05 31.6 10.4 72 25-98 284-362 (386)
137 3pe7_A Oligogalacturonate lyas 92.8 1.6 5.4E-05 29.9 10.0 99 7-105 174-279 (388)
138 3o4h_A Acylamino-acid-releasin 91.5 1.7 5.9E-05 31.9 9.2 78 24-103 153-231 (582)
139 1fwx_A Nitrous oxide reductase 91.5 2.4 8.4E-05 32.5 10.1 68 20-89 133-216 (595)
140 1mda_H Methylamine dehydrogena 91.5 0.85 2.9E-05 32.6 7.2 76 22-99 262-346 (368)
141 1k32_A Tricorn protease; prote 91.2 3.7 0.00013 32.7 11.3 77 21-102 379-464 (1045)
142 1fwx_A Nitrous oxide reductase 90.9 0.95 3.3E-05 34.7 7.3 74 21-99 277-361 (595)
143 3c5m_A Oligogalacturonate lyas 90.6 2.9 9.8E-05 28.5 9.9 82 23-107 38-119 (396)
144 3azo_A Aminopeptidase; POP fam 89.6 4.1 0.00014 30.2 9.8 82 20-104 241-330 (662)
145 2ecf_A Dipeptidyl peptidase IV 89.1 3.6 0.00012 31.0 9.3 77 22-100 38-139 (741)
146 2z3z_A Dipeptidyl aminopeptida 87.9 3 0.0001 31.2 8.2 77 24-104 313-396 (706)
147 3o4h_A Acylamino-acid-releasin 86.6 1.7 5.8E-05 32.0 6.0 86 7-97 181-274 (582)
148 2gop_A Trilobed protease; beta 86.0 4.9 0.00017 26.9 7.8 80 20-106 14-101 (347)
149 4a5s_A Dipeptidyl peptidase 4 84.8 4.4 0.00015 30.9 7.7 77 23-103 321-404 (740)
150 3iuj_A Prolyl endopeptidase; h 84.4 7.2 0.00025 29.7 8.7 79 27-107 332-413 (693)
151 4a5s_A Dipeptidyl peptidase 4 83.8 12 0.00043 28.4 11.2 77 28-106 372-456 (740)
152 2z3z_A Dipeptidyl aminopeptida 82.0 14 0.00047 27.6 12.8 74 26-101 361-437 (706)
153 4e54_B DNA damage-binding prot 81.7 11 0.00039 26.4 10.2 81 22-106 121-203 (435)
154 2xyi_A Probable histone-bindin 79.9 13 0.00045 26.0 8.3 73 21-98 278-352 (430)
155 1xfd_A DIP, dipeptidyl aminope 79.8 15 0.0005 27.5 8.8 77 24-100 309-396 (723)
156 3zwu_A Alkaline phosphatase PH 77.3 22 0.00076 27.2 11.8 68 19-87 382-494 (592)
157 1yr2_A Prolyl oligopeptidase; 76.4 23 0.0008 27.0 9.5 73 29-104 324-400 (741)
158 3iuj_A Prolyl endopeptidase; h 75.8 24 0.00081 26.8 12.0 74 28-105 287-365 (693)
159 3zwu_A Alkaline phosphatase PH 75.6 22 0.00074 27.2 8.7 66 19-85 474-548 (592)
160 1k32_A Tricorn protease; prote 75.3 15 0.00052 29.2 8.1 97 7-104 39-148 (1045)
161 2ecf_A Dipeptidyl peptidase IV 74.9 24 0.00082 26.4 11.6 77 24-105 340-421 (741)
162 2xyi_A Probable histone-bindin 74.6 19 0.00066 25.2 10.6 74 21-99 232-309 (430)
163 1qks_A Cytochrome CD1 nitrite 74.3 25 0.00086 26.4 11.2 71 25-99 302-373 (567)
164 1xfd_A DIP, dipeptidyl aminope 72.8 27 0.00092 26.0 10.4 83 22-106 62-150 (723)
165 1yr2_A Prolyl oligopeptidase; 69.0 19 0.00065 27.4 7.1 77 25-105 368-447 (741)
166 2vdu_B TRNA (guanine-N(7)-)-me 68.5 28 0.00094 24.4 11.1 72 22-98 104-179 (450)
167 2xdw_A Prolyl endopeptidase; a 66.6 32 0.0011 26.0 7.9 74 30-103 81-164 (710)
168 2ymu_A WD-40 repeat protein; u 66.4 33 0.0011 24.6 12.1 79 20-105 467-545 (577)
169 1r5m_A SIR4-interacting protei 65.9 28 0.00095 23.5 8.5 73 21-99 331-425 (425)
170 2bkl_A Prolyl endopeptidase; m 65.3 38 0.0013 25.5 8.1 73 30-102 77-159 (695)
171 2pm9_A Protein WEB1, protein t 64.5 30 0.001 23.4 8.8 75 21-99 166-249 (416)
172 2pm9_A Protein WEB1, protein t 61.8 34 0.0012 23.1 10.1 75 22-100 264-338 (416)
173 2oit_A Nucleoporin 214KDA; NH2 59.9 44 0.0015 23.8 9.6 77 21-102 150-226 (434)
174 2xe4_A Oligopeptidase B; hydro 59.4 58 0.002 25.1 9.7 70 31-100 125-211 (751)
175 4g56_B MGC81050 protein; prote 57.8 42 0.0014 22.9 9.1 71 23-98 229-300 (357)
176 4gqb_B Methylosome protein 50; 56.1 45 0.0015 22.7 9.7 55 22-81 216-271 (344)
177 1tl2_A L10, protein (tachylect 55.7 45 0.0015 22.5 7.2 69 19-97 39-114 (236)
178 3zwl_B Eukaryotic translation 55.5 41 0.0014 22.1 14.5 89 6-100 16-106 (369)
179 2xdw_A Prolyl endopeptidase; a 55.2 65 0.0022 24.3 11.3 78 24-105 339-422 (710)
180 2aq5_A Coronin-1A; WD40 repeat 55.1 47 0.0016 22.7 10.3 73 22-99 83-163 (402)
181 3hxj_A Pyrrolo-quinoline quino 54.2 43 0.0015 21.9 10.8 66 24-100 140-205 (330)
182 3hxj_A Pyrrolo-quinoline quino 53.6 44 0.0015 21.9 10.6 72 21-101 215-286 (330)
183 2ymu_A WD-40 repeat protein; u 52.5 61 0.0021 23.2 13.0 78 21-105 427-504 (577)
184 4a11_B DNA excision repair pro 52.3 50 0.0017 22.1 10.2 77 21-101 44-133 (408)
185 4e54_B DNA damage-binding prot 51.7 58 0.002 22.7 9.6 75 21-100 165-241 (435)
186 3i2n_A WD repeat-containing pr 51.7 48 0.0016 21.7 6.7 73 21-98 210-290 (357)
187 4aez_A CDC20, WD repeat-contai 51.5 55 0.0019 22.4 14.3 76 20-100 217-294 (401)
188 3ei3_B DNA damage-binding prot 48.7 59 0.002 21.9 11.8 81 21-105 74-156 (383)
189 1z68_A Fibroblast activation p 47.9 47 0.0016 24.8 6.0 75 23-103 62-143 (719)
190 3vl1_A 26S proteasome regulato 45.5 68 0.0023 21.7 7.4 70 25-99 252-322 (420)
191 3ei3_B DNA damage-binding prot 43.7 71 0.0024 21.4 13.2 79 22-105 120-200 (383)
192 1xks_A Nuclear pore complex pr 43.5 94 0.0032 22.9 6.8 71 21-97 107-181 (450)
193 2aq5_A Coronin-1A; WD40 repeat 40.0 86 0.0029 21.3 11.9 77 23-101 223-301 (402)
194 4g56_B MGC81050 protein; prote 39.3 88 0.003 21.2 8.4 69 23-96 142-210 (357)
195 1w6s_A Methanol dehydrogenase 38.4 1.2E+02 0.0042 22.9 7.0 19 68-86 393-411 (599)
196 2bkl_A Prolyl endopeptidase; m 37.5 1.3E+02 0.0044 22.6 11.0 71 30-104 280-356 (695)
197 1z68_A Fibroblast activation p 37.1 46 0.0016 24.9 4.4 81 24-105 256-352 (719)
198 3mmy_A MRNA export factor; mRN 36.1 89 0.0031 20.3 12.1 77 21-102 40-120 (368)
199 1k8k_C P40, ARP2/3 complex 41 36.0 92 0.0031 20.5 10.9 72 21-98 9-82 (372)
200 3mkq_A Coatomer beta'-subunit; 34.6 1.4E+02 0.0049 22.3 11.7 74 21-99 98-172 (814)
201 1r5m_A SIR4-interacting protei 34.6 1E+02 0.0035 20.6 11.8 70 21-98 248-318 (425)
202 3mmy_A MRNA export factor; mRN 33.9 98 0.0033 20.1 7.6 61 22-87 275-335 (368)
203 3vl1_A 26S proteasome regulato 33.5 1.1E+02 0.0038 20.6 12.5 72 21-99 140-212 (420)
204 1k8k_C P40, ARP2/3 complex 41 32.9 1E+02 0.0036 20.2 10.5 60 21-85 203-262 (372)
205 1wmv_A WWOX, WW domain contain 32.4 41 0.0014 17.0 2.5 22 19-41 11-32 (54)
206 1kv9_A Type II quinohemoprotei 32.1 1.5E+02 0.0052 22.4 6.7 15 71-85 384-398 (668)
207 4h5i_A Guanine nucleotide-exch 28.7 1.4E+02 0.0047 20.3 8.6 71 21-97 270-341 (365)
208 2zux_A YESW protein; beta-prop 28.6 2E+02 0.0069 22.1 9.8 92 3-100 270-374 (591)
209 2ynn_A Coatomer subunit beta'; 28.4 1.3E+02 0.0043 19.7 11.3 72 21-97 98-170 (304)
210 3k26_A Polycomb protein EED; W 26.7 1.3E+02 0.0046 19.5 11.2 73 23-99 72-147 (366)
211 1yiq_A Quinohemoprotein alcoho 26.7 82 0.0028 24.1 4.3 16 71-86 392-407 (689)
212 1gxr_A ESG1, transducin-like e 26.3 1.3E+02 0.0045 19.2 13.3 73 21-99 142-214 (337)
213 2zuy_A YESX protein; beta-prop 25.7 2.3E+02 0.008 21.9 10.9 93 3-101 274-379 (620)
214 1got_B GT-beta; complex (GTP-b 25.6 1.5E+02 0.0051 19.6 12.0 72 21-98 185-256 (340)
215 2vdu_B TRNA (guanine-N(7)-)-me 25.5 1.7E+02 0.0058 20.3 10.6 75 21-101 196-273 (450)
216 3mkq_A Coatomer beta'-subunit; 25.2 2.2E+02 0.0074 21.3 13.4 78 15-99 8-86 (814)
217 4gqb_B Methylosome protein 50; 25.2 1.6E+02 0.0055 19.9 10.2 71 22-97 129-199 (344)
218 3b7f_A Glycosyl hydrolase, BNR 24.8 1.7E+02 0.0058 20.1 5.5 77 22-100 56-148 (394)
219 3sbq_A Nitrous-oxide reductase 24.5 2.5E+02 0.0086 21.9 6.7 51 32-86 142-195 (638)
220 3a0f_A Xyloglucanase; beta-pro 23.9 2.5E+02 0.0087 21.7 8.3 76 21-100 21-114 (763)
221 4a11_B DNA excision repair pro 23.5 1.7E+02 0.0057 19.4 11.1 72 23-98 144-217 (408)
222 1sq9_A Antiviral protein SKI8; 20.8 1.9E+02 0.0066 19.1 11.0 54 21-79 292-366 (397)
223 1pgu_A Actin interacting prote 20.1 2.4E+02 0.0082 20.0 11.6 73 21-98 161-237 (615)
No 1
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.91 E-value=7.1e-24 Score=162.27 Aligned_cols=102 Identities=27% Similarity=0.360 Sum_probs=94.4
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCC-eEEEEEcCCCCcEEEEeCCCCCceeEEEecCCC
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAG-KILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDE 80 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~-~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~ 80 (109)
+..++++|+.+++++ .++..|++||+||.+|+|||+|++. .+ +|++++|||+.+++++...+.+|+|||+|+.++
T Consensus 413 I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~---~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~ 489 (628)
T 4a0p_A 413 INVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQE---RSPKIERAALDGTEREVLFFSGLSKPIALALDSRLG 489 (628)
T ss_dssp EEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEET---TEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred EEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCC---CCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCC
Confidence 456789999998888 5799999999999999999999984 33 899999999999999998899999999999999
Q ss_pred eEEEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 81 MLYWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 81 ~lYw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
+|||+|...++|+++++||++++++.+
T Consensus 490 ~LYw~D~~~~~I~~~~~dG~~r~~~~~ 516 (628)
T 4a0p_A 490 KLFWADSDLRRIESSDLSGANRIVLED 516 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEEEeCCCCEEEEEeCCCCceEEEEc
Confidence 999999999999999999999999875
No 2
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.91 E-value=1.6e-23 Score=160.10 Aligned_cols=103 Identities=32% Similarity=0.571 Sum_probs=95.5
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++|+ .++..|++||+||.+|+|||+|++. .++|+++.|||+.+++++...+.+|+|||+|+.+++
T Consensus 416 I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~---~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~ 492 (619)
T 3s94_A 416 IEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGE---IPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGK 492 (619)
T ss_dssp EEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred EEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCC---CCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCE
Confidence 456789999999998 6899999999999999999999984 589999999999999999888999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEeC
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYLN 108 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~~ 108 (109)
|||+|...++|+++++||+.+++++.+
T Consensus 493 LY~aD~~~~~I~~~~~dG~~~~~~~~~ 519 (619)
T 3s94_A 493 IYWGDAKTDKIEVMNTDGTGRRVLVED 519 (619)
T ss_dssp EEEEETTTTEEEEEESSSCCCEEEEEC
T ss_pred EEEEECCCCEEEEEecCCCceEEEecc
Confidence 999999999999999999999998753
No 3
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.90 E-value=8.1e-23 Score=148.96 Aligned_cols=103 Identities=23% Similarity=0.431 Sum_probs=95.1
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++++ ..+..|++||+||..|+|||+|++. .++|+++++||+.+++++...+.+|+|||+|+.+++
T Consensus 183 I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~---~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 183 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 259 (400)
T ss_dssp EEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS---SCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred EEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC---CCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCE
Confidence 346789999999998 5899999999999999999999874 589999999999999999888999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEeC
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYLN 108 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~~ 108 (109)
|||+|...++|+++++||+++++++..
T Consensus 260 lY~aD~~~~~I~~~d~dG~~~~~~~~~ 286 (400)
T 3p5b_L 260 LYWVDSKLHSISSIDVNGGNRKTILED 286 (400)
T ss_dssp EEEEETTTTEEEEEETTSCCCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCccEEEEeC
Confidence 999999999999999999999998753
No 4
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.90 E-value=8.9e-23 Score=159.56 Aligned_cols=103 Identities=23% Similarity=0.431 Sum_probs=95.5
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++|+ ..+..|++|||||..|+|||+|++. .++|++++|||+.+++++...+.+|+|||||+.+++
T Consensus 495 I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~---~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 495 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 571 (791)
T ss_dssp EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTE
T ss_pred EEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC---CCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCe
Confidence 456789999999998 6899999999999999999999983 489999999999999999988999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEeC
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYLN 108 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~~ 108 (109)
|||+|...++|++++++|+.++++++.
T Consensus 572 LYwaD~~~~~I~~~d~dG~~~~~v~~~ 598 (791)
T 3m0c_C 572 LYWVDSKLHSISSIDVNGGNRKTILED 598 (791)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEEC
T ss_pred EEEEeCCCCcEEEEecCCCceEEEecC
Confidence 999999999999999999999999864
No 5
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.90 E-value=1.3e-22 Score=144.19 Aligned_cols=102 Identities=33% Similarity=0.578 Sum_probs=94.2
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++++ ..+..|++||+||..|+|||+|++. .++|+++++||+.+++++...+..|+|||+|+.+++
T Consensus 103 I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~ 179 (318)
T 3sov_A 103 IEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQK 179 (318)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS---SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred EEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC---CCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCE
Confidence 345788999999988 6899999999999999999999863 689999999999999998888999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
|||+|...++|+++++||++++++++
T Consensus 180 lY~aD~~~~~I~~~d~dG~~~~~~~~ 205 (318)
T 3sov_A 180 LYWADAKLNFIHKSNLDGTNRQAVVK 205 (318)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEEECCCCEEEEEcCCCCceEEEec
Confidence 99999999999999999999999875
No 6
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.89 E-value=2.7e-22 Score=143.81 Aligned_cols=103 Identities=34% Similarity=0.596 Sum_probs=93.9
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++++ ..+..|++||+||..|+|||+|++. .++|+++++||+.+++++...+..|+|||+|+.+++
T Consensus 140 I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~ 216 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRR 216 (349)
T ss_dssp EEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTE
T ss_pred EEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC---CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCE
Confidence 345788999998888 5789999999999999999999983 399999999999999988888999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEeC
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYLN 108 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~~ 108 (109)
|||+|...++|+++++||+++++++..
T Consensus 217 lY~aD~~~~~I~~~~~dG~~~~~~~~~ 243 (349)
T 3v64_C 217 MYWVDAKHHVIERANLDGSHRKAVISQ 243 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred EEEEECCCCEEEEEeCCCCceEEEEeC
Confidence 999999999999999999999888753
No 7
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.89 E-value=2.3e-22 Score=153.68 Aligned_cols=102 Identities=33% Similarity=0.578 Sum_probs=92.2
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++++ ..+..|++||+||..|+|||||++. .++|+++.|||+.+++++...+.+|+|||+|+.+++
T Consensus 108 I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~---~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~ 184 (619)
T 3s94_A 108 IEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQK 184 (619)
T ss_dssp EEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTE
T ss_pred EEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCC---CCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCE
Confidence 456789999999998 7899999999999999999999984 689999999999999999888999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
|||+|...++|+++++||+.+++++.
T Consensus 185 LY~aD~~~~~I~~~~~dG~~~~~~~~ 210 (619)
T 3s94_A 185 LYWADAKLNFIHKSNLDGTNRQAVVK 210 (619)
T ss_dssp EEEEETTTCCEEEESSSCCEEC----
T ss_pred EEEEeCCCCeEEEecCCCCccEEEEe
Confidence 99999999999999999999988765
No 8
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.88 E-value=1.1e-21 Score=142.21 Aligned_cols=103 Identities=34% Similarity=0.596 Sum_probs=94.1
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++++ .++..|++||+||..|+|||+|++. .++|+++++||+.+++++...+..|+|||+|+.+++
T Consensus 183 I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~ 259 (386)
T 3v65_B 183 IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRR 259 (386)
T ss_dssp EEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTE
T ss_pred EEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC---CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCE
Confidence 345788999998888 5789999999999999999999983 389999999999999999888999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEeC
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYLN 108 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~~ 108 (109)
|||+|...++|+++++||+++++++..
T Consensus 260 lY~aD~~~~~I~~~d~dG~~~~~~~~~ 286 (386)
T 3v65_B 260 MYWVDAKHHVIERANLDGSHRKAVISQ 286 (386)
T ss_dssp EEEEETTTTEEEEECTTSCSCEEEECS
T ss_pred EEEEECCCCEEEEEeCCCCeeEEEEEC
Confidence 999999999999999999999888753
No 9
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.88 E-value=2.4e-21 Score=136.92 Aligned_cols=101 Identities=24% Similarity=0.434 Sum_probs=92.4
Q ss_pred eecCCCCCccEEEec-CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeE
Q psy959 4 TDKDLLKTHRSLLLQ-AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEML 82 (109)
Q Consensus 4 ~~~~l~G~~~~~li~-~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~l 82 (109)
...+++|+.+++++. .+..|++|++||..|+|||+|++. .++|+++++||+.++++....+..|+|||+|+.+++|
T Consensus 102 ~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~---~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 102 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp EEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred EEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC---CCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEE
Confidence 456789999888884 789999999999999999999872 4899999999999999887789999999999999999
Q ss_pred EEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 83 YWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 83 Yw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
||+|...++|++++++|+++++++.
T Consensus 179 Y~~D~~~~~I~~~d~dg~~~~~~~~ 203 (316)
T 1ijq_A 179 YWVDSKLHSISSIDVNGGNRKTILE 203 (316)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEE
T ss_pred EEEECCCCeEEEEecCCCceEEEee
Confidence 9999999999999999999998875
No 10
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.88 E-value=1.7e-21 Score=149.10 Aligned_cols=101 Identities=31% Similarity=0.524 Sum_probs=92.5
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++++ ..+..|++||+||..|+|||+|++. .++|++++|||+.+++++. .+.+|+|||+|+.+++
T Consensus 104 I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~---~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~ 179 (628)
T 4a0p_A 104 IEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG---KPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRR 179 (628)
T ss_dssp EEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTE
T ss_pred EEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC---CCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCE
Confidence 456789999999998 7899999999999999999999874 6899999999999999885 7899999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
|||+|...++|++++++|+.++++..
T Consensus 180 LY~aD~~~~~I~~~d~dG~~~~v~~~ 205 (628)
T 4a0p_A 180 LYWTDLDTNLIESSNMLGLNREVIAD 205 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred EEEEECCCCEEEEEcCCCCceEEeec
Confidence 99999999999999999999976643
No 11
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.84 E-value=8.6e-20 Score=142.78 Aligned_cols=99 Identities=20% Similarity=0.325 Sum_probs=86.9
Q ss_pred cCCCCC----ccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCC
Q psy959 6 KDLLKT----HRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDE 80 (109)
Q Consensus 6 ~~l~G~----~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~ 80 (109)
++++|. ...+++ ..+..|.||||||..++|||+|.. ..+|++++++|+.+++++...+..|++||||+..+
T Consensus 451 ~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~----~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 451 TQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV----LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 526 (791)
T ss_dssp EEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT----TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT
T ss_pred EeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC----CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCC
Confidence 456663 456666 489999999999999999999998 68999999999999999988899999999999999
Q ss_pred eEEEEeCCC-CeEEEEeCCCCCeEEEEeC
Q psy959 81 MLYWTDAVR-EKIERSDLAGNNREALYLN 108 (109)
Q Consensus 81 ~lYw~D~~~-~~I~~~~~dG~~~~~l~~~ 108 (109)
+|||+|++. ++|+++++||+.+++++..
T Consensus 527 ~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 527 FMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred CEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 999999986 8999999999999999864
No 12
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.84 E-value=9.2e-20 Score=130.61 Aligned_cols=99 Identities=22% Similarity=0.379 Sum_probs=90.3
Q ss_pred ecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEE
Q psy959 5 DKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 5 ~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lY 83 (109)
..+++|+..+.++ .++..|.+||+|+..++|||+|.. ..+|.++++||+.+++++...+..|++||+|+..+.||
T Consensus 99 r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~----~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 99 RANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp EEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred EEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC----CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEE
Confidence 4567888777776 678999999999999999999998 68999999999999999888899999999999999999
Q ss_pred EEeCCC-CeEEEEeCCCCCeEEEEe
Q psy959 84 WTDAVR-EKIERSDLAGNNREALYL 107 (109)
Q Consensus 84 w~D~~~-~~I~~~~~dG~~~~~l~~ 107 (109)
|+|++. ++|+++++||+.++++++
T Consensus 175 ~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp EEECSSSCEEEEEETTSCSCEESCC
T ss_pred EeccCCCCEEEEEeCCCCCcEEEEE
Confidence 999997 999999999999988765
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.83 E-value=2.6e-19 Score=130.43 Aligned_cols=99 Identities=20% Similarity=0.326 Sum_probs=87.2
Q ss_pred cCCCC----CccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCC
Q psy959 6 KDLLK----THRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDE 80 (109)
Q Consensus 6 ~~l~G----~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~ 80 (109)
.+++| +....++ ..+..|.|||+|+..++|||+|.. ..+|.+++++|..+++++...+..|++||+|+..+
T Consensus 139 ~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~----~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 139 TQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV----LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 214 (400)
T ss_dssp EEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT----TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTT
T ss_pred EEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC----CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccC
Confidence 45666 4466666 588999999999999999999998 68999999999999999988899999999999999
Q ss_pred eEEEEeCC-CCeEEEEeCCCCCeEEEEeC
Q psy959 81 MLYWTDAV-REKIERSDLAGNNREALYLN 108 (109)
Q Consensus 81 ~lYw~D~~-~~~I~~~~~dG~~~~~l~~~ 108 (109)
+|||+|++ .++|+++++||+.+++++.+
T Consensus 215 ~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 215 FMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred eEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 99999987 48999999999999998764
No 14
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.83 E-value=2.3e-19 Score=130.03 Aligned_cols=100 Identities=22% Similarity=0.377 Sum_probs=91.0
Q ss_pred ecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEE
Q psy959 5 DKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 5 ~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lY 83 (109)
..+++|+..+.++ .++..|.+||+||..++|||+|.. ..+|.+++++|+.+++++...+..|++|++|+..++||
T Consensus 142 r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~----~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 142 RANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp EEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT----TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC----CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEE
Confidence 4567888776766 678999999999999999999998 68999999999999999988899999999999999999
Q ss_pred EEeCCC-CeEEEEeCCCCCeEEEEeC
Q psy959 84 WTDAVR-EKIERSDLAGNNREALYLN 108 (109)
Q Consensus 84 w~D~~~-~~I~~~~~dG~~~~~l~~~ 108 (109)
|+|++. ++|+++++||+.+++++..
T Consensus 218 ~td~~~~~~I~r~~~dG~~~~~~~~~ 243 (386)
T 3v65_B 218 WTDWGNTPRIEASSMDGSGRRIIADT 243 (386)
T ss_dssp EEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EeccCCCCEEEEEeCCCCCcEEEEEC
Confidence 999987 9999999999999988753
No 15
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.82 E-value=5.6e-19 Score=125.47 Aligned_cols=100 Identities=27% Similarity=0.418 Sum_probs=88.2
Q ss_pred ecCCCCCcc-EEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeE
Q psy959 5 DKDLLKTHR-SLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEML 82 (109)
Q Consensus 5 ~~~l~G~~~-~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~l 82 (109)
..+++|+.. +.++ .++..|.|||+|+..++|||+|.. ..+|.+++++|+.++++....+..|++|++|+..++|
T Consensus 61 r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~----~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~l 136 (318)
T 3sov_A 61 RTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE----TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFM 136 (318)
T ss_dssp EEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEE
T ss_pred EEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC----CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEE
Confidence 356777743 3444 789999999999999999999987 6899999999999999988889999999999999999
Q ss_pred EEEeCC-CCeEEEEeCCCCCeEEEEeC
Q psy959 83 YWTDAV-REKIERSDLAGNNREALYLN 108 (109)
Q Consensus 83 Yw~D~~-~~~I~~~~~dG~~~~~l~~~ 108 (109)
||+|++ .++|+++++||+.+++++.+
T Consensus 137 y~td~~~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 137 YWTDWGEVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp EEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEecCCCCEEEEEEcCCCCeEEEEEC
Confidence 999986 78999999999999988753
No 16
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.81 E-value=1.6e-18 Score=122.49 Aligned_cols=99 Identities=20% Similarity=0.328 Sum_probs=85.2
Q ss_pred cCCCC----CccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCC
Q psy959 6 KDLLK----THRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDE 80 (109)
Q Consensus 6 ~~l~G----~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~ 80 (109)
.+++| +..+.++ ..+..|.+||+|+..++|||+|.. ..+|.+++++|..+++++...+..|++|++|+..+
T Consensus 57 ~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g 132 (316)
T 1ijq_A 57 TQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV----LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 132 (316)
T ss_dssp EEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT----TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT
T ss_pred EECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC----CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCC
Confidence 45565 5566666 578999999999999999999987 68999999999999988887889999999999999
Q ss_pred eEEEEeCCC-CeEEEEeCCCCCeEEEEeC
Q psy959 81 MLYWTDAVR-EKIERSDLAGNNREALYLN 108 (109)
Q Consensus 81 ~lYw~D~~~-~~I~~~~~dG~~~~~l~~~ 108 (109)
+|||+|++. ++|+++++||+.+++++..
T Consensus 133 ~ly~~d~~~~~~I~~~~~dG~~~~~~~~~ 161 (316)
T 1ijq_A 133 FMYWTDWGTPAKIKKGGLNGVDIYSLVTE 161 (316)
T ss_dssp EEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred EEEEEccCCCCeEEEEcCCCCCeEEEEEC
Confidence 999999985 8999999999999988653
No 17
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.81 E-value=7e-20 Score=141.50 Aligned_cols=102 Identities=24% Similarity=0.428 Sum_probs=92.7
Q ss_pred eeecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++++ ..+..|++||+||..|+|||+|++. .++|+++++||+.+++++...+..|+|||+|+.+++
T Consensus 477 I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~---~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~ 553 (699)
T 1n7d_A 477 VSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 553 (699)
T ss_dssp EEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS---SCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCC
T ss_pred EEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC---CCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCE
Confidence 346788999988888 5789999999999999999999873 489999999999999888778999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
|||+|...++|++++++|+++++++.
T Consensus 554 LY~aD~~~~~I~~~d~dG~~~~~~~~ 579 (699)
T 1n7d_A 554 LYWVDSKLHSISSIDVNGGNRKTILE 579 (699)
T ss_dssp EEEEETTTTEEEEECSSSSCCEEECC
T ss_pred EEEEecCCCeEEEEccCCCceEEEEe
Confidence 99999999999999999999998875
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.73 E-value=2.3e-16 Score=107.95 Aligned_cols=102 Identities=25% Similarity=0.405 Sum_probs=87.8
Q ss_pred eecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeE
Q psy959 4 TDKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEML 82 (109)
Q Consensus 4 ~~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~l 82 (109)
...+++|+.+++++ .++..|+++++||..|+|||+|...+ ..+|++..+||+.++++....+..|+||++|+..++|
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~--~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~l 181 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD--NPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQL 181 (267)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSS--SCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCC--CcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEE
Confidence 34567888887777 46789999999998999999997621 4799999999999888876778899999999999999
Q ss_pred EEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 83 YWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 83 Yw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
||+|...++|.+++++|..++.++.
T Consensus 182 yv~d~~~~~I~~~~~~g~~~~~~~~ 206 (267)
T 1npe_A 182 CWVDAGTHRAECLNPAQPGRRKVLE 206 (267)
T ss_dssp EEEETTTTEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCEEEEEecCCCceEEEec
Confidence 9999999999999999987776653
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.72 E-value=4.8e-16 Score=106.39 Aligned_cols=99 Identities=27% Similarity=0.399 Sum_probs=86.8
Q ss_pred ecCCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEE
Q psy959 5 DKDLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 5 ~~~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lY 83 (109)
..+++|+..+.++ .++..|.+|++|+..++|||+|.. ..+|.+.+++|+.++++....+..|++|++|+.+++||
T Consensus 62 ~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~----~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~ly 137 (267)
T 1npe_A 62 RASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ----LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLY 137 (267)
T ss_dssp EEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEE
T ss_pred EEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC----CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEE
Confidence 4567788777776 567899999999989999999987 68999999999988888777778999999999999999
Q ss_pred EEeCC--CCeEEEEeCCCCCeEEEEe
Q psy959 84 WTDAV--REKIERSDLAGNNREALYL 107 (109)
Q Consensus 84 w~D~~--~~~I~~~~~dG~~~~~l~~ 107 (109)
|+|.. .++|+++++||+.++++..
T Consensus 138 v~~~~~~~~~I~~~~~dg~~~~~~~~ 163 (267)
T 1npe_A 138 WTDWNRDNPKIETSHMDGTNRRILAQ 163 (267)
T ss_dssp EEECCSSSCEEEEEETTSCCCEEEEC
T ss_pred EEECCCCCcEEEEEecCCCCcEEEEE
Confidence 99987 6899999999998887753
No 20
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.67 E-value=4e-17 Score=126.15 Aligned_cols=98 Identities=20% Similarity=0.324 Sum_probs=83.4
Q ss_pred cCCCC----CccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCC
Q psy959 6 KDLLK----THRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDE 80 (109)
Q Consensus 6 ~~l~G----~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~ 80 (109)
.+++| +....++ ..+..|.+||||+..++|||+|.. ..+|.+++++|..+++++...+..|++||+|+..+
T Consensus 433 ~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~----~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g 508 (699)
T 1n7d_A 433 TQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV----LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHG 508 (699)
T ss_dssp EESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT----TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSS
T ss_pred EecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc----CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCC
Confidence 34555 4555555 568899999999999999999987 68999999999999988877789999999999999
Q ss_pred eEEEEeCCC-CeEEEEeCCCCCeEEEEe
Q psy959 81 MLYWTDAVR-EKIERSDLAGNNREALYL 107 (109)
Q Consensus 81 ~lYw~D~~~-~~I~~~~~dG~~~~~l~~ 107 (109)
+|||+|++. ++|++++++|+.+++++.
T Consensus 509 ~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 509 FMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp CCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred cEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 999999975 899999999999888764
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.55 E-value=3.4e-14 Score=100.46 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=74.1
Q ss_pred eecCCCCCccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEE
Q psy959 4 TDKDLLKTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 4 ~~~~l~G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lY 83 (109)
-.++++|+.++.|++ .+...+++|..++|||+++.. ..+|++++|||+.+++|.+..+ | .+|+.+++||
T Consensus 170 y~~~l~g~~~~~l~~---~~~~~~~~P~g~~iy~t~~~~---~~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy 238 (302)
T 3s25_A 170 YRYDTASQSEALFYD---CNCYKPVVLDDTNVYYMDVNR---DNAIVHVNINNPNPVVLTEANI--E---HYNVYGSLIF 238 (302)
T ss_dssp EEEETTTTEEEEEEC---SCEEEEEEEETTEEEEEEGGG---TTEEEEECSSSCCCEECSCSCE--E---EEEEETTEEE
T ss_pred EEEECCCCCEEEEeC---CCccceeeecCCEEEEEEcCC---CcEEEEEECCCCCeEEEeCCCc--c---eEEECCCEEE
Confidence 356788888887764 344456778899999999874 4799999999999988865443 3 3777799999
Q ss_pred EE-eCCCCeEEEEeCCCCCeEEEEeC
Q psy959 84 WT-DAVREKIERSDLAGNNREALYLN 108 (109)
Q Consensus 84 w~-D~~~~~I~~~~~dG~~~~~l~~~ 108 (109)
|+ +.....|+++++||+++++|...
T Consensus 239 ~~~~~~~~~i~~~~~DG~~r~~l~~~ 264 (302)
T 3s25_A 239 YQRGGDNPALCVVKNDGTGFKELAKG 264 (302)
T ss_dssp EEECSSSCEEEEEETTSCCCEEEEES
T ss_pred EEECCCCcEEEEEECCCCccEEeeCC
Confidence 98 55578999999999999888764
No 22
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.48 E-value=6.9e-13 Score=93.74 Aligned_cols=92 Identities=13% Similarity=0.123 Sum_probs=75.3
Q ss_pred eeecCCCCCccEEEec-CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 3 STDKDLLKTHRSLLLQ-AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 3 ~~~~~l~G~~~~~li~-~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
+..++++|+.+++|.+ .+ | .++|..++|||++... ...|+++++||+.++.|.... ..++.+.+++
T Consensus 209 I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~~~~~---~~~i~~~~~DG~~r~~l~~~~-----~~~i~i~~d~ 275 (302)
T 3s25_A 209 IVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQRGGD---NPALCVVKNDGTGFKELAKGE-----FCNINVTSQY 275 (302)
T ss_dssp EEEECSSSCCCEECSCSCE--E---EEEEETTEEEEEECSS---SCEEEEEETTSCCCEEEEESC-----EEEEEECSSE
T ss_pred EEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEEECCC---CcEEEEEECCCCccEEeeCCc-----cceEEEeCCE
Confidence 4578999999988874 33 3 4778799999985432 589999999999999987642 2356668999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEe
Q psy959 82 LYWTDAVREKIERSDLAGNNREALYL 107 (109)
Q Consensus 82 lYw~D~~~~~I~~~~~dG~~~~~l~~ 107 (109)
|||+|+..+.|.++++||+++.+|++
T Consensus 276 Iy~td~~~~~i~~~~~dGs~~~~l~~ 301 (302)
T 3s25_A 276 VYFTDFVSNKEYCTSTQNPDTIKALQ 301 (302)
T ss_dssp EEEEETTTCCEEEEESSSCCSCEECC
T ss_pred EEEEECCCCeEEEEECCCCCceEecC
Confidence 99999998899999999999999876
No 23
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.21 E-value=2.6e-10 Score=80.03 Aligned_cols=82 Identities=13% Similarity=0.093 Sum_probs=69.5
Q ss_pred CCCcceEEeeCCCCeEEEEec-CCCCCCCeEEEEEcCCCCcEEEEeC---------CCCCceeEEEecCCCeEEEEeCCC
Q psy959 20 IPGRRHFMPPIRLRTLYYTDW-GRFGTAGKILRTTMAGSLKKVIIEK---------DLSQPSGLAIDFDDEMLYWTDAVR 89 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~-~~~~~~~~I~~~~~dG~~~~~l~~~---------~~~~p~glaiD~~~~~lYw~D~~~ 89 (109)
+..|.+|++||..|.||++|. . ..+|.+.+.+|.....+... .+..|.+|++|+.+++||++|...
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred cCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 568999999998999999996 5 68999999999877766432 245799999999889999999999
Q ss_pred CeEEEEeCC-CCCeEEE
Q psy959 90 EKIERSDLA-GNNREAL 105 (109)
Q Consensus 90 ~~I~~~~~d-G~~~~~l 105 (109)
++|.+.+.+ |+..+.+
T Consensus 218 ~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREI 234 (329)
T ss_dssp TEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCcEEEEE
Confidence 999999998 7765554
No 24
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.19 E-value=2.4e-10 Score=83.80 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=68.5
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-CCCCCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-KDLSQPSGLAIDFDDEMLYWTDAVREKIERSD 96 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~ 96 (109)
..+..|.++++||..|+|||+|.. ..+|.+.++++.....+.. .....|++|++|+..++|||+|...++|.+++
T Consensus 223 ~~~~~p~giavdp~~g~lyv~d~~----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 223 TKGQNCNGAETHPINGELYFNSWN----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp EECSSCCCEEECTTTCCEEEEETT----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccCCCceEEEEeCCCCEEEEEECC----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEe
Confidence 357899999999999999999998 6899999999876644443 34568999999999999999999999999999
Q ss_pred CCCC
Q psy959 97 LAGN 100 (109)
Q Consensus 97 ~dG~ 100 (109)
+||.
T Consensus 299 ~d~~ 302 (430)
T 3tc9_A 299 YDWK 302 (430)
T ss_dssp EETT
T ss_pred CCcc
Confidence 9985
No 25
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.10 E-value=1.7e-09 Score=75.76 Aligned_cols=82 Identities=10% Similarity=0.109 Sum_probs=68.4
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC--CcEEEE--------eCCCCCceeEEEecCCCeEEEEeC-
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS--LKKVII--------EKDLSQPSGLAIDFDDEMLYWTDA- 87 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~--~~~~l~--------~~~~~~p~glaiD~~~~~lYw~D~- 87 (109)
.+..|.+|++|+ .|.||++|.. ..+|.+.+.+|. ....+- ...+..|.+|++|+.++.||++|.
T Consensus 89 ~~~~p~gia~d~-~g~l~v~d~~----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 89 LFYLPHGLSIDT-DGNYWVTDVA----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp TCSSEEEEEECT-TSCEEEEETT----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred ccCCceEEEECC-CCCEEEEECC----CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 367899999998 8889999987 689999999998 344443 234668999999998999999997
Q ss_pred CCCeEEEEeCCCCCeEEE
Q psy959 88 VREKIERSDLAGNNREAL 105 (109)
Q Consensus 88 ~~~~I~~~~~dG~~~~~l 105 (109)
..++|.+.+.+|.....+
T Consensus 164 ~~~~I~~~~~~g~~~~~~ 181 (329)
T 3fvz_A 164 CNSRIVQFSPSGKFVTQW 181 (329)
T ss_dssp SCCEEEEECTTSCEEEEE
T ss_pred CCCeEEEEcCCCCEEEEe
Confidence 799999999999876654
No 26
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=2.1e-09 Score=78.80 Aligned_cols=99 Identities=13% Similarity=0.040 Sum_probs=76.3
Q ss_pred ecCCCCCccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCc--EEEEeCCCCCceeEEEecCCCeE
Q psy959 5 DKDLLKTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLK--KVIIEKDLSQPSGLAIDFDDEML 82 (109)
Q Consensus 5 ~~~l~G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~--~~l~~~~~~~p~glaiD~~~~~l 82 (109)
..++++...+.++..+..|.+|++|+..++||++|.........+.....+|... ..+. .+..|+++++|+..++|
T Consensus 163 ~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~--~~~~p~giavdp~~g~l 240 (430)
T 3tc9_A 163 LIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT--KGQNCNGAETHPINGEL 240 (430)
T ss_dssp EEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE--ECSSCCCEEECTTTCCE
T ss_pred EEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec--cCCCceEEEEeCCCCEE
Confidence 3466666666667778899999999966679999985311134677777787665 4443 37899999999989999
Q ss_pred EEEeCCCCeEEEEeCCCCCeEEE
Q psy959 83 YWTDAVREKIERSDLAGNNREAL 105 (109)
Q Consensus 83 Yw~D~~~~~I~~~~~dG~~~~~l 105 (109)
|++|...++|.+.+.+|.....+
T Consensus 241 yv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 241 YFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp EEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEE
Confidence 99999999999999998765333
No 27
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.01 E-value=3.4e-09 Score=77.83 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=65.5
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEe-CCCCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIE-KDLSQPSGLAIDFDDEMLYWTDAVREKIERS 95 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~-~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~ 95 (109)
..+..|.++++|+..|+|||+|.. ..+|.+.+.+ |...+.+.. .....+.+|++|+..++||++|...++|.++
T Consensus 225 ~~~~~P~giavd~~~G~lyv~d~~----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 225 CNARGAKTCAVHPQNGKIYYTRYH----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRV 300 (433)
T ss_dssp EECSSBCCCEECTTTCCEEECBTT----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cccCCCCEEEEeCCCCeEEEEECC----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 357889999999999999999987 6899999997 655344443 3345677899999999999999999999999
Q ss_pred eCCCC
Q psy959 96 DLAGN 100 (109)
Q Consensus 96 ~~dG~ 100 (109)
++|+.
T Consensus 301 ~~d~~ 305 (433)
T 4hw6_A 301 DYNRE 305 (433)
T ss_dssp EBCTT
T ss_pred eCCCC
Confidence 99864
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.00 E-value=9.8e-09 Score=74.66 Aligned_cols=72 Identities=10% Similarity=0.103 Sum_probs=58.9
Q ss_pred CCCcceEEeeCCCCeEEEEec-CCCCCCCeEEEEEc-CCCCcEEEEeC--------------CCCCceeEEEecCCCeEE
Q psy959 20 IPGRRHFMPPIRLRTLYYTDW-GRFGTAGKILRTTM-AGSLKKVIIEK--------------DLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~-~~~~~~~~I~~~~~-dG~~~~~l~~~--------------~~~~p~glaiD~~~~~lY 83 (109)
+..|.+|++|+ .|.||++|. . +.+|.+.++ +|. ..++... .+..|.+|++|+. +.||
T Consensus 322 ~~~P~gia~d~-dG~lyvad~~~----~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~ly 394 (409)
T 3hrp_A 322 FAQPNGMTVDE-DGNFYIVDGFK----GYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYW 394 (409)
T ss_dssp CSSEEEEEECT-TCCEEEEETTT----TCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEE
T ss_pred eCCCeEEEEeC-CCCEEEEeCCC----CCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEE
Confidence 67899999999 688999998 7 699999994 564 3334332 1678999999987 8999
Q ss_pred EEeCCCCeEEEEeCC
Q psy959 84 WTDAVREKIERSDLA 98 (109)
Q Consensus 84 w~D~~~~~I~~~~~d 98 (109)
++|...++|.+..++
T Consensus 395 Vad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 395 IAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEESTTCEEEEEEEC
T ss_pred EEECCCCeEEEEEeC
Confidence 999999999988753
No 29
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.96 E-value=5.3e-09 Score=78.40 Aligned_cols=81 Identities=17% Similarity=0.165 Sum_probs=66.8
Q ss_pred ecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC--------CCC-----------cEEEEe-CCCCCceeEEEe
Q psy959 17 LQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA--------GSL-----------KKVIIE-KDLSQPSGLAID 76 (109)
Q Consensus 17 i~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d--------G~~-----------~~~l~~-~~~~~p~glaiD 76 (109)
+.....|.++++||..++||++|.. ...|++.+++ |.. .+.+.. ....+|.+|++|
T Consensus 243 v~~~~~p~giavdp~~g~LYvtd~~----~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~ 318 (496)
T 3kya_A 243 IAAYKQCNGATIHPINGELYFNSYE----KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIH 318 (496)
T ss_dssp EEEESCCCCEEECTTTCCEEEEETT----TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEEC
T ss_pred eccCCCceEEEEcCCCCeEEEEECC----CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEc
Confidence 3356899999999999999999998 6899999997 332 123333 345689999999
Q ss_pred cCCCeEEEEeCCCCeEEEEeCCCCC
Q psy959 77 FDDEMLYWTDAVREKIERSDLAGNN 101 (109)
Q Consensus 77 ~~~~~lYw~D~~~~~I~~~~~dG~~ 101 (109)
+..+.||++|...++|.++++||..
T Consensus 319 p~G~~lYvaD~~~h~I~kid~dg~~ 343 (496)
T 3kya_A 319 PTGKYAYFGVINNHYFMRSDYDEIK 343 (496)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CCCCEEEEEeCCCCEEEEEecCCCc
Confidence 9999999999999999999999865
No 30
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.95 E-value=1.8e-08 Score=73.26 Aligned_cols=73 Identities=19% Similarity=0.287 Sum_probs=60.3
Q ss_pred Ccc-eEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCC--------------CCCceeEEEecCCCeEEEEe
Q psy959 22 GRR-HFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKD--------------LSQPSGLAIDFDDEMLYWTD 86 (109)
Q Consensus 22 ~p~-~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~--------------~~~p~glaiD~~~~~lYw~D 86 (109)
.|. +|++||..+.||++|.. ..+|.+.+.+|. ..++.... +..|.||++|+.. +||++|
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~----~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad 340 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQN----LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVD 340 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETT----TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEE
T ss_pred CccccEEEeCCCCEEEEEeCC----CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEe
Confidence 367 99999988999999987 689999999998 33444332 6789999999775 599999
Q ss_pred C-CCCeEEEEe-CCCC
Q psy959 87 A-VREKIERSD-LAGN 100 (109)
Q Consensus 87 ~-~~~~I~~~~-~dG~ 100 (109)
. ..++|.+.+ -+|.
T Consensus 341 ~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGY 356 (409)
T ss_dssp TTTTCEEEEEETTTTE
T ss_pred CCCCCEEEEEECCCCE
Confidence 9 999999999 5554
No 31
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.92 E-value=3.4e-09 Score=77.84 Aligned_cols=73 Identities=14% Similarity=0.224 Sum_probs=60.4
Q ss_pred CCCcceEEe---------eCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeC-----------------CCCCceeE
Q psy959 20 IPGRRHFMP---------PIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEK-----------------DLSQPSGL 73 (109)
Q Consensus 20 l~~p~~iav---------d~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~-----------------~~~~p~gl 73 (109)
+..|.++++ |. .|.||++|.. +.+|.+.+.+|... ++.-. .+.+|.||
T Consensus 334 ~~~P~giav~~n~~y~~dd~-~g~lyvaD~~----n~~I~~~~~~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~gi 407 (433)
T 4hw6_A 334 LWGPNQGIFVKNEAYAGEED-EYDFYFCDRD----SHTVRVLTPEGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSI 407 (433)
T ss_dssp CSSEEEEEEEECGGGTTSSC-CEEEEEEETT----TTEEEEECTTSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEE
T ss_pred EcCCccEEEEccccccccCC-CCcEEEEECC----CCEEEEECCCCCEE-EEEeCCCCCccccCCCccccccEeCCCcEE
Confidence 678999999 65 9999999998 79999999888433 33311 25789999
Q ss_pred EEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 74 AIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 74 aiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
++|+..+.||++|...++|.++.++
T Consensus 408 avd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 408 AYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEECCCCEEEEEeCCCCEEEEEecC
Confidence 9999999999999999999988764
No 32
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=4.6e-08 Score=73.37 Aligned_cols=78 Identities=18% Similarity=0.178 Sum_probs=64.4
Q ss_pred CCCCcc-eEEeeC------CCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeC-----------------------CCC
Q psy959 19 AIPGRR-HFMPPI------RLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEK-----------------------DLS 68 (109)
Q Consensus 19 ~l~~p~-~iavd~------~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~-----------------------~~~ 68 (109)
.|..|. ++++|. ..|.||++|.. +++|.+.+.+|. ..++.-. .+.
T Consensus 370 ~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~----N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~ 444 (496)
T 3kya_A 370 RMNNPCQGVFVKNPDYTGEEEYDFYFVDRL----NFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFR 444 (496)
T ss_dssp BCSSEEEEEEEECTTCCSSCCEEEEEEEGG----GTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCS
T ss_pred ccCCCeEEEEEccccccccCCCeEEEEECC----CCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcC
Confidence 367899 889883 48999999998 799999998884 4444321 267
Q ss_pred CceeEEEecCCCeEEEEeCCCCeEEEEeCCCCC
Q psy959 69 QPSGLAIDFDDEMLYWTDAVREKIERSDLAGNN 101 (109)
Q Consensus 69 ~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~~ 101 (109)
.|.||++|+.++.||.+|...++|.++.++|..
T Consensus 445 ~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 445 DVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 899999998889999999999999999998853
No 33
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.78 E-value=5.4e-08 Score=65.35 Aligned_cols=90 Identities=14% Similarity=0.225 Sum_probs=68.9
Q ss_pred CCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 7 DLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 7 ~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
+.+|....... ..+..|.+|++|+ .|+||+++.. ...|.+.+.+|.....+....+..|.++++|+.. +||++
T Consensus 177 ~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~----~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~ 250 (270)
T 1rwi_B 177 EAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHN----TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR-TVYVA 250 (270)
T ss_dssp CTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETT----TSCEEEECTTCSCCEECCCCSCSCEEEEEECTTC-CEEEE
T ss_pred ecCCCceEeecccCCCCceEEEECC-CCCEEEEECC----CCcEEEEcCCCCcceeeccCCCCCceeEEECCCC-CEEEE
Confidence 44444433322 4568899999999 6799999987 5889999998877655443456789999999765 69999
Q ss_pred eCCCCeEEEEeCCCCCe
Q psy959 86 DAVREKIERSDLAGNNR 102 (109)
Q Consensus 86 D~~~~~I~~~~~dG~~~ 102 (109)
+...++|...+++...+
T Consensus 251 ~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 251 DRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EGGGTEEEEECCCGGGS
T ss_pred ECCCCEEEEEcCCCccc
Confidence 99999999998876543
No 34
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.78 E-value=8.7e-08 Score=64.31 Aligned_cols=81 Identities=14% Similarity=0.198 Sum_probs=66.2
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
..+..|.+|++|+ .|+||+++.. ...|.+.+.++..........+..|.+|++|+.. +||+++...+.|.+.+.
T Consensus 147 ~~~~~p~~i~~~~-~g~l~v~~~~----~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 147 TGLNDPDGVAVDN-SGNVYVTDTD----NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp CSCCSCCCEEECT-TCCEEEEEGG----GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECT
T ss_pred ccCCCceeEEEeC-CCCEEEEECC----CCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcC
Confidence 3467899999999 7789999987 5899999998877554444456889999999765 99999999899999999
Q ss_pred CCCCeEE
Q psy959 98 AGNNREA 104 (109)
Q Consensus 98 dG~~~~~ 104 (109)
+|.....
T Consensus 221 ~~~~~~~ 227 (270)
T 1rwi_B 221 GSTTSTV 227 (270)
T ss_dssp TCSCCEE
T ss_pred CCCccee
Confidence 8875543
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.78 E-value=1.9e-07 Score=63.47 Aligned_cols=92 Identities=9% Similarity=0.087 Sum_probs=70.1
Q ss_pred CCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-CCCCCceeEEEecCCCeEEEE
Q psy959 8 LLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-KDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 8 l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-~~~~~p~glaiD~~~~~lYw~ 85 (109)
.+|+..+.+- ..+..|.+|++|+ .|.+|+++.. ...|.+.+.+|.....+.. ..+..|.+|++|+. ++||++
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~ 180 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECK----VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEIFIS 180 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETT----TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEEEEE
T ss_pred CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECC----CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC-CCEEEE
Confidence 4454443332 3457899999999 7889999986 5899999988876655543 34678999999975 679999
Q ss_pred eCCCCeEEEEeCCCCCeEEE
Q psy959 86 DAVREKIERSDLAGNNREAL 105 (109)
Q Consensus 86 D~~~~~I~~~~~dG~~~~~l 105 (109)
+...+.|...+.+|.....+
T Consensus 181 ~~~~~~i~~~~~~g~~~~~~ 200 (286)
T 1q7f_A 181 DNRAHCVKVFNYEGQYLRQI 200 (286)
T ss_dssp EGGGTEEEEEETTCCEEEEE
T ss_pred ECCCCEEEEEcCCCCEEEEE
Confidence 99889999999988755443
No 36
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.71 E-value=3.9e-07 Score=61.83 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=70.4
Q ss_pred CCCCCccEEEe--cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeC-CCCCceeEEEecCCCeEE
Q psy959 7 DLLKTHRSLLL--QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEK-DLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 7 ~l~G~~~~~li--~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~-~~~~p~glaiD~~~~~lY 83 (109)
+.+|+....+- ..+..|.+|++|+ .|.+|+++.. ...|.+.+.+|.....+... .+..|.+|++|+. ++||
T Consensus 148 ~~~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~-G~l~ 221 (286)
T 1q7f_A 148 DQNGNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNR----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSN-GEIL 221 (286)
T ss_dssp CTTSCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGG----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTT-CCEE
T ss_pred cCCCCEEEEeCCCCccCCcEEEEECC-CCCEEEEECC----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCC-CCEE
Confidence 44555443332 3467899999999 7899999987 68999999988765554332 2578999999975 5899
Q ss_pred EEeCCCC-eEEEEeCCCCCeEEE
Q psy959 84 WTDAVRE-KIERSDLAGNNREAL 105 (109)
Q Consensus 84 w~D~~~~-~I~~~~~dG~~~~~l 105 (109)
.++.... +|...+.+|.....+
T Consensus 222 v~~~~~~~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 222 IADNHNNFNLTIFTQDGQLISAL 244 (286)
T ss_dssp EEECSSSCEEEEECTTSCEEEEE
T ss_pred EEeCCCCEEEEEECCCCCEEEEE
Confidence 9999875 999999988765554
No 37
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.70 E-value=3.2e-07 Score=63.87 Aligned_cols=80 Identities=16% Similarity=0.293 Sum_probs=62.7
Q ss_pred CCCcceEEeeCCCCeEEEEecCCC-------------CCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEe
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRF-------------GTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTD 86 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~-------------~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D 86 (109)
+..|.++++|+..|.||++|.... .....|.+.+.++...+.+. ..+..|+||++++..+.||++|
T Consensus 125 ~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 125 FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEE
T ss_pred ccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEe
Confidence 467999999986789999996520 01367888887655544443 3467899999999888999999
Q ss_pred CCCCeEEEEeCCCC
Q psy959 87 AVREKIERSDLAGN 100 (109)
Q Consensus 87 ~~~~~I~~~~~dG~ 100 (109)
...++|.+.+++|.
T Consensus 204 ~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 204 FLSHQIVKYWLEGP 217 (322)
T ss_dssp GGGTEEEEEESSST
T ss_pred CCCCeEEEEECCCC
Confidence 99999999999973
No 38
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.64 E-value=2.2e-07 Score=66.38 Aligned_cols=81 Identities=16% Similarity=0.130 Sum_probs=64.0
Q ss_pred ccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-----CCCCCceeEEEecC---CCeEE
Q psy959 12 HRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-----KDLSQPSGLAIDFD---DEMLY 83 (109)
Q Consensus 12 ~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-----~~~~~p~glaiD~~---~~~lY 83 (109)
..+++.+++..|++++++| .|.||+++.. .+|.+.. +|.. +.+.. .....|.||++++. +++||
T Consensus 22 ~~~~va~~l~~P~~ia~~p-dG~l~V~e~~-----g~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lY 93 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLP-DGGMLIAERP-----GRIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVY 93 (352)
T ss_dssp CEEEEECCCSCEEEEEECT-TSCEEEEETT-----TEEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEE
T ss_pred EEEEEECCCCCceEEEEcC-CCeEEEEeCC-----CeEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEE
Confidence 3455668899999999999 7889999964 7999988 7753 33322 23568999999988 88999
Q ss_pred EEeCCC-----CeEEEEeCCCC
Q psy959 84 WTDAVR-----EKIERSDLAGN 100 (109)
Q Consensus 84 w~D~~~-----~~I~~~~~dG~ 100 (109)
.++... .+|.+.+.++.
T Consensus 94 v~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 94 AYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp EEEEECTTSSEEEEEEEEECSS
T ss_pred EEEecCCCCCccEEEEEEeCCC
Confidence 999854 78999998864
No 39
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.62 E-value=4e-07 Score=65.21 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=63.7
Q ss_pred cEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-----CCCCCceeEEEecC---CCeEEE
Q psy959 13 RSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-----KDLSQPSGLAIDFD---DEMLYW 84 (109)
Q Consensus 13 ~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-----~~~~~p~glaiD~~---~~~lYw 84 (109)
.+++.+++..|++++++| .|.||+++.. .+|.+.+.+|. +.+.. .....|.||++++. +++||.
T Consensus 21 ~~~va~~l~~P~~ia~~p-dG~l~V~e~~-----g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv 92 (354)
T 3a9g_A 21 ISEVASDLEVPWSIAPLG-GGRYLVTERP-----GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYL 92 (354)
T ss_dssp EEEEECSCSCEEEEEEEE-TTEEEEEETT-----TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred EEEEeCCCCCCeEEEEcC-CCeEEEEeCC-----CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEE
Confidence 345558899999999999 7899999974 79999977776 44432 23567999999998 899999
Q ss_pred EeCC---C----CeEEEEeCCCC
Q psy959 85 TDAV---R----EKIERSDLAGN 100 (109)
Q Consensus 85 ~D~~---~----~~I~~~~~dG~ 100 (109)
++.. . .+|.+.+.++.
T Consensus 93 ~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 93 YASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp EEEEECGGGCEEEEEEEEEECSS
T ss_pred EEeccCCCCCcceEEEEEEECCC
Confidence 9863 3 68999998876
No 40
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.60 E-value=1.1e-06 Score=59.30 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=67.3
Q ss_pred CCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 7 DLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 7 ~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
+.+|+.....+ .....|.++++|+ .|.||+++.. ...|.+.+.+|.............|.+|++|+ .+.||++
T Consensus 131 ~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~ 204 (300)
T 2qc5_A 131 TADGTIYEYDLPNKGSYPAFITLGS-DNALWFTENQ----NNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWFV 204 (300)
T ss_dssp CTTSCEEEEECSSTTCCEEEEEECT-TSSEEEEETT----TTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEE
T ss_pred CCCCCEEEccCCCCCCCceeEEECC-CCCEEEEecC----CCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEEE
Confidence 34444433333 2467899999998 7789999976 57899998877655432234567899999997 5689999
Q ss_pred eCCCCeEEEEeCCCCCeE
Q psy959 86 DAVREKIERSDLAGNNRE 103 (109)
Q Consensus 86 D~~~~~I~~~~~dG~~~~ 103 (109)
+...+.|.+.+.+|....
T Consensus 205 ~~~~~~i~~~~~~g~~~~ 222 (300)
T 2qc5_A 205 EIMGNKIGRITTTGEISE 222 (300)
T ss_dssp ETTTTEEEEECTTCCEEE
T ss_pred ccCCCEEEEEcCCCcEEE
Confidence 998889999998776444
No 41
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.59 E-value=1.2e-06 Score=59.04 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=67.4
Q ss_pred CCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 7 DLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 7 ~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
+.+|+...... .....|.+|++|+ .|.||+++.. ...|.+.+.+|.............|.+|++|+. ++||++
T Consensus 173 ~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~ 246 (300)
T 2qc5_A 173 TNTGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIM----GNKIGRITTTGEISEYDIPTPNARPHAITAGKN-SEIWFT 246 (300)
T ss_dssp CTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETT----TTEEEEECTTCCEEEEECSSTTCCEEEEEECST-TCEEEE
T ss_pred CCCCcEEEeeCCCCCCCcceEEECC-CCCEEEEccC----CCEEEEEcCCCcEEEEECCCCCCCceEEEECCC-CCEEEe
Confidence 34455443323 3467899999998 7899999986 578999998776554433345678999999976 569999
Q ss_pred eCCCCeEEEEeCCCCCe
Q psy959 86 DAVREKIERSDLAGNNR 102 (109)
Q Consensus 86 D~~~~~I~~~~~dG~~~ 102 (109)
+...+.|.+.+.+|.-.
T Consensus 247 ~~~~~~i~~~~~~g~~~ 263 (300)
T 2qc5_A 247 EWGANQIGRITNDNTIQ 263 (300)
T ss_dssp ETTTTEEEEECTTSCEE
T ss_pred ccCCCeEEEECCCCcEE
Confidence 98888999999877543
No 42
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.59 E-value=8.1e-07 Score=61.82 Aligned_cols=85 Identities=15% Similarity=0.178 Sum_probs=64.2
Q ss_pred EEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC---CcEEEEeCCCCCceeEEEecCCCeEEEEeCC--
Q psy959 14 SLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS---LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV-- 88 (109)
Q Consensus 14 ~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~---~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~-- 88 (109)
+.+...+..|.+|++++..+.||++|.. ..+|.+.+++|. ..+++... .. |.||++|+. ++||.++..
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~----~~~I~~~~~~~~~~~~~~~~~~~-~g-P~gi~~d~~-G~l~va~~~~~ 250 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFL----SHQIVKYWLEGPKKGTAEVLVKI-PN-PGNIKRNAD-GHFWVSSSEEL 250 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGG----GTEEEEEESSSTTTTCEEEEEEC-SS-EEEEEECTT-SCEEEEEEEET
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCC----CCeEEEEECCCCcCCccceEEeC-CC-CCCeEECCC-CCEEEEecCcc
Confidence 3444667899999999966689999987 689999999873 34444432 23 999999975 578988875
Q ss_pred --------CCeEEEEeCCCCCeEEE
Q psy959 89 --------REKIERSDLAGNNREAL 105 (109)
Q Consensus 89 --------~~~I~~~~~dG~~~~~l 105 (109)
...|.+.+.+|+....+
T Consensus 251 ~~~~~~~~~~~v~~~d~~G~~~~~~ 275 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEFGNILEVI 275 (322)
T ss_dssp TSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred cccccCCCccEEEEECCCCCEEEEE
Confidence 46788888888765544
No 43
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.54 E-value=3e-06 Score=57.85 Aligned_cols=86 Identities=9% Similarity=0.006 Sum_probs=68.3
Q ss_pred CCCccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCC
Q psy959 9 LKTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 9 ~G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
.|...+++..++..|.+++.|+..+.|||++.. ...|.+.+.++. .+.+ ......|.+|++|+ .++||+++..
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~----~~~i~~~~~~~~-~~~~-~~~~~~~~~l~~~~-dg~l~v~~~~ 88 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARSAVIFSDVR----QNRTWAWSDDGQ-LSPE-MHPSHHQNGHCLNK-QGHLIACSHG 88 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGG----GTEEEEEETTSC-EEEE-ESSCSSEEEEEECT-TCCEEEEETT
T ss_pred CCCcEEEEecCCccccCCeEeCCCCEEEEEeCC----CCEEEEEECCCC-eEEE-ECCCCCcceeeECC-CCcEEEEecC
Confidence 344556676889999999999966569999987 689999999887 5444 34557899999997 4568999988
Q ss_pred CCeEEEEeC-CCCC
Q psy959 89 REKIERSDL-AGNN 101 (109)
Q Consensus 89 ~~~I~~~~~-dG~~ 101 (109)
...|.+.+. +|+-
T Consensus 89 ~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 89 LRRLERQREPGGEW 102 (296)
T ss_dssp TTEEEEECSTTCCE
T ss_pred CCeEEEEcCCCCcE
Confidence 889999998 5653
No 44
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.52 E-value=1.5e-06 Score=60.32 Aligned_cols=77 Identities=16% Similarity=0.082 Sum_probs=57.7
Q ss_pred EEEecCC---CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCC-
Q psy959 14 SLLLQAI---PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVR- 89 (109)
Q Consensus 14 ~~li~~l---~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~- 89 (109)
..++..+ ..|.++++|+ .|.|||+|.. .++|.+.+.+|..... ... -..|.+|++|+.. +||.+|...
T Consensus 22 ~~~~~~~p~~~~pegia~~~-~g~lyv~d~~----~~~I~~~d~~g~~~~~-~~~-~~~p~gia~~~dG-~l~vad~~~~ 93 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAP-DGTIFVTNHE----VGEIVSITPDGNQQIH-ATV-EGKVSGLAFTSNG-DLVATGWNAD 93 (306)
T ss_dssp EEEEEEECTTCCEEEEEECT-TSCEEEEETT----TTEEEEECTTCCEEEE-EEC-SSEEEEEEECTTS-CEEEEEECTT
T ss_pred ceEeEeCCCCCCcceEEECC-CCCEEEEeCC----CCeEEEECCCCceEEE-EeC-CCCceeEEEcCCC-cEEEEeccCC
Confidence 3445555 7899999999 7889999987 6899999999864333 332 3579999999764 599999764
Q ss_pred -CeEEEEeCC
Q psy959 90 -EKIERSDLA 98 (109)
Q Consensus 90 -~~I~~~~~d 98 (109)
.+|.+++..
T Consensus 94 ~~~v~~~d~~ 103 (306)
T 2p4o_A 94 SIPVVSLVKS 103 (306)
T ss_dssp SCEEEEEECT
T ss_pred cceEEEEcCC
Confidence 357777643
No 45
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.46 E-value=1.7e-06 Score=59.59 Aligned_cols=85 Identities=14% Similarity=0.201 Sum_probs=65.1
Q ss_pred EecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC---CC--CcEEEEeC--CCCCceeEEEecCCCeEEEEeCC
Q psy959 16 LLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA---GS--LKKVIIEK--DLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 16 li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d---G~--~~~~l~~~--~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
+...+..|++++++|....|||++.. ..+|.+.++| |. +++++... ....|.|+++|+. ++||.+...
T Consensus 144 ~~~~~~~pngi~~spdg~~lyv~~~~----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~ 218 (297)
T 3g4e_A 144 YFDQVDISNGLDWSLDHKIFYYIDSL----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE-GKLWVACYN 218 (297)
T ss_dssp EEEEESBEEEEEECTTSCEEEEEEGG----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT-SCEEEEEET
T ss_pred EeeccccccceEEcCCCCEEEEecCC----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC-CCEEEEEcC
Confidence 44667889999999977789999987 6899999875 32 23444432 2357999999976 589999988
Q ss_pred CCeEEEEeCC-CCCeEEE
Q psy959 89 REKIERSDLA-GNNREAL 105 (109)
Q Consensus 89 ~~~I~~~~~d-G~~~~~l 105 (109)
.++|.+.+.+ |+-...+
T Consensus 219 ~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 219 GGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp TTEEEEECTTTCCEEEEE
T ss_pred CCEEEEEcCCCceEEEEE
Confidence 8899999987 7654443
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.44 E-value=5.8e-06 Score=55.67 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=65.0
Q ss_pred CCCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 7 DLLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 7 ~l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
+.+|+...... .....|.++++|+ .|.+|+++.. ...|.+.+.+|.............|.+|++|+. +.||++
T Consensus 126 d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~ 199 (299)
T 2z2n_A 126 TDDGKIREYELPNKGSYPSFITLGS-DNALWFTENQ----NNAIGRITESGDITEFKIPTPASGPVGITKGND-DALWFV 199 (299)
T ss_dssp CTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETT----TTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEE
T ss_pred CCCCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCC----CCEEEEEcCCCcEEEeeCCCCCCcceeEEECCC-CCEEEE
Confidence 34444443333 3457899999998 7899999876 578999988665444323344678999999976 679999
Q ss_pred eCCCCeEEEEeCCCCC
Q psy959 86 DAVREKIERSDLAGNN 101 (109)
Q Consensus 86 D~~~~~I~~~~~dG~~ 101 (109)
+...+.|.+.+.+|.-
T Consensus 200 ~~~~~~i~~~~~~g~~ 215 (299)
T 2z2n_A 200 EIIGNKIGRITTSGEI 215 (299)
T ss_dssp ETTTTEEEEECTTCCE
T ss_pred ccCCceEEEECCCCcE
Confidence 9888899999886653
No 47
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.42 E-value=5.8e-06 Score=55.65 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=63.8
Q ss_pred CCCCccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEe
Q psy959 8 LLKTHRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTD 86 (109)
Q Consensus 8 l~G~~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D 86 (109)
.+|+.....+ .....|.++++|+ .|.||+++.. ...|.+.+.+|.............|.+|++|+. ++||+++
T Consensus 169 ~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~ 242 (299)
T 2z2n_A 169 ESGDITEFKIPTPASGPVGITKGN-DDALWFVEII----GNKIGRITTSGEITEFKIPTPNARPHAITAGAG-IDLWFTE 242 (299)
T ss_dssp TTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETT----TTEEEEECTTCCEEEEECSSTTCCEEEEEECST-TCEEEEE
T ss_pred CCCcEEEeeCCCCCCcceeEEECC-CCCEEEEccC----CceEEEECCCCcEEEEECCCCCCCceeEEECCC-CCEEEec
Confidence 3444433323 3567899999998 6889999976 578999988665433222234678999999976 5699999
Q ss_pred CCCCeEEEEeCCCC
Q psy959 87 AVREKIERSDLAGN 100 (109)
Q Consensus 87 ~~~~~I~~~~~dG~ 100 (109)
...+.|.+.+.+|.
T Consensus 243 ~~~~~i~~~d~~g~ 256 (299)
T 2z2n_A 243 WGANKIGRLTSNNI 256 (299)
T ss_dssp TTTTEEEEEETTTE
T ss_pred cCCceEEEECCCCc
Confidence 88889999998764
No 48
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.41 E-value=1.1e-05 Score=55.72 Aligned_cols=85 Identities=21% Similarity=0.199 Sum_probs=68.1
Q ss_pred CCccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCC
Q psy959 10 KTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVR 89 (109)
Q Consensus 10 G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~ 89 (109)
|...+.|.++...+.+.+.++..+.|||+|.. ..+|.+.+.+|.. +++. .....|+++++|+. ++||+++...
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~----~~~i~~~~~~g~~-~~~~-~~~~~~~gl~~d~d-G~l~v~~~~~ 106 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLV----GRRVLGWREDGTV-DVLL-DATAFTNGNAVDAQ-QRLVHCEHGR 106 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETT----TTEEEEEETTSCE-EEEE-ESCSCEEEEEECTT-SCEEEEETTT
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECC----CCEEEEEeCCCCE-EEEe-CCCCccceeeECCC-CCEEEEECCC
Confidence 44556777889999999999977779999987 6899999887763 3333 34567999999975 5699999988
Q ss_pred CeEEEEeCCCCC
Q psy959 90 EKIERSDLAGNN 101 (109)
Q Consensus 90 ~~I~~~~~dG~~ 101 (109)
..|.+.+.+|+-
T Consensus 107 ~~v~~~~~~g~~ 118 (305)
T 3dr2_A 107 RAITRSDADGQA 118 (305)
T ss_dssp TEEEEECTTSCE
T ss_pred CEEEEECCCCCE
Confidence 899999998763
No 49
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.37 E-value=4.8e-06 Score=58.58 Aligned_cols=80 Identities=19% Similarity=0.173 Sum_probs=59.5
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCC-CCCCeEEEEEcC-CCCcEEEEeC-C----CCCceeEEEecCCCeEEEEeC---C
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRF-GTAGKILRTTMA-GSLKKVIIEK-D----LSQPSGLAIDFDDEMLYWTDA---V 88 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~-~~~~~I~~~~~d-G~~~~~l~~~-~----~~~p~glaiD~~~~~lYw~D~---~ 88 (109)
.+..|.++++|+ .|+|||+|.+.. ...++|.+.+++ |...+.+... . ...|+++++|+..+.+|.+|. .
T Consensus 65 ~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 467899999999 699999997510 002789999986 4434444321 1 246899999998899999999 7
Q ss_pred CCeEEEEeCCC
Q psy959 89 REKIERSDLAG 99 (109)
Q Consensus 89 ~~~I~~~~~dG 99 (109)
...|...+++.
T Consensus 144 ~~~i~v~d~~~ 154 (343)
T 2qe8_A 144 KAALIRVDLQT 154 (343)
T ss_dssp GCEEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 78999998863
No 50
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.36 E-value=2.9e-06 Score=58.61 Aligned_cols=77 Identities=18% Similarity=0.266 Sum_probs=58.2
Q ss_pred CCCcceEEeeCCCCeEEEEecC--C-----------CCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWG--R-----------FGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~--~-----------~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
+..|+++++|+ .|.+|++|.. . +.....|++.+.+ |.... +. .+..|+||++++..+.||++
T Consensus 130 ~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~-~~--~~~~p~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 130 LNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR-MA--DLDHPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp CSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE-EE--EESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE-Ee--cCCCCcceEEcCCCCEEEEE
Confidence 46789999999 8999999741 0 0013578888885 44443 33 57799999999999999999
Q ss_pred eCCC-----CeEEEEeCCCC
Q psy959 86 DAVR-----EKIERSDLAGN 100 (109)
Q Consensus 86 D~~~-----~~I~~~~~dG~ 100 (109)
|... ..|.+.++++.
T Consensus 206 ~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 206 QTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp ECCC---CCCEEEEEEEETT
T ss_pred ecCCcCCCCCEEEEEEecCC
Confidence 9873 78999888763
No 51
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.32 E-value=6.5e-06 Score=57.03 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=58.9
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCC--C--CcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEE
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAG--S--LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIER 94 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG--~--~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~ 94 (109)
.+..|.+| ++..++||++|.. ..+|.+.++++ + .++++.. +..|.||++|+. ++||.++...++|.+
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~----~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~d-G~l~va~~~~~~V~~ 237 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTE----KMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVE-GNLYGATHIYNSVVR 237 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETT----TTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTT-CCEEEECBTTCCEEE
T ss_pred CCCcCCCc--CcCCCEEEEEeCC----CCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCC-CCEEEEeCCCCeEEE
Confidence 45678898 5547899999987 68999999985 2 2444443 468999999975 589999999999999
Q ss_pred EeCCCCC
Q psy959 95 SDLAGNN 101 (109)
Q Consensus 95 ~~~dG~~ 101 (109)
.+.+|+.
T Consensus 238 ~~~~G~~ 244 (306)
T 2p4o_A 238 IAPDRST 244 (306)
T ss_dssp ECTTCCE
T ss_pred ECCCCCE
Confidence 9998864
No 52
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.31 E-value=1.6e-06 Score=61.87 Aligned_cols=91 Identities=8% Similarity=0.074 Sum_probs=66.0
Q ss_pred CCccEEEecCCCCcceEEeeCCCCe-EEEEecCCCCCCCeEEEEEcCCCCcEEEE------eCCCCCceeEEEecC---C
Q psy959 10 KTHRSLLLQAIPGRRHFMPPIRLRT-LYYTDWGRFGTAGKILRTTMAGSLKKVII------EKDLSQPSGLAIDFD---D 79 (109)
Q Consensus 10 G~~~~~li~~l~~p~~iavd~~~g~-lywsd~~~~~~~~~I~~~~~dG~~~~~l~------~~~~~~p~glaiD~~---~ 79 (109)
|-..+++.++|..|++|+++| .|. ||+++.. .+|.+...+|...+.+. .....-|.+|++++. +
T Consensus 7 g~~~~~va~~l~~P~~i~~~p-dG~~l~V~e~~-----G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~ 80 (353)
T 2g8s_A 7 TVNVEVLQDKLDHPWALAFLP-DNHGMLITLRG-----GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQS 80 (353)
T ss_dssp CSEEEEEEEEESSEEEEEECS-TTCCEEEEETT-----TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHH
T ss_pred CcEEEEEECCCCCcEEEEEcC-CCCEEEEEeCC-----ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCC
Confidence 334455668899999999999 677 9999964 78999987775432221 122345789999997 8
Q ss_pred CeEEEEeCC-------CCeEEEEeCCCC-----CeEEEE
Q psy959 80 EMLYWTDAV-------REKIERSDLAGN-----NREALY 106 (109)
Q Consensus 80 ~~lYw~D~~-------~~~I~~~~~dG~-----~~~~l~ 106 (109)
++||+++.. ..+|.+..+++. ..++++
T Consensus 81 g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~ 119 (353)
T 2g8s_A 81 RRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVF 119 (353)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEE
T ss_pred CEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEE
Confidence 999999864 458988888754 355554
No 53
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.28 E-value=1.4e-05 Score=57.46 Aligned_cols=83 Identities=17% Similarity=0.097 Sum_probs=62.9
Q ss_pred ccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe------CCCCCceeEEEecC---CCeE
Q psy959 12 HRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE------KDLSQPSGLAIDFD---DEML 82 (109)
Q Consensus 12 ~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~------~~~~~p~glaiD~~---~~~l 82 (109)
..+++.++|..|++|++.| .|.||+++.. ..+|.+...++.....+.. ....-|.|||++|. ++.|
T Consensus 23 ~~~~va~gL~~P~~ia~~p-dG~llVter~----~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~l 97 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLP-GGDLLVSSRD----EATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMV 97 (347)
T ss_dssp EEEEEECCCSSEEEEEECT-TSCEEEEETT----TCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEE
T ss_pred eeEEeecCCCCceEEEEcC-CCcEEEEEec----CCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEE
Confidence 3455668999999999999 7899999985 4899998875433333321 23556899999985 7889
Q ss_pred EEEeC--CCCeEEEEeCCC
Q psy959 83 YWTDA--VREKIERSDLAG 99 (109)
Q Consensus 83 Yw~D~--~~~~I~~~~~dG 99 (109)
|.+.. ...+|.+..+++
T Consensus 98 Yv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 98 YAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEEEECSSSEEEEEEEBCT
T ss_pred EEEEecCCCCEEEEEEeCC
Confidence 98753 457999999887
No 54
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.24 E-value=1.2e-05 Score=59.39 Aligned_cols=89 Identities=19% Similarity=0.314 Sum_probs=63.6
Q ss_pred ccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEe--CCC------CCceeEEEecC---C
Q psy959 12 HRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIE--KDL------SQPSGLAIDFD---D 79 (109)
Q Consensus 12 ~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~--~~~------~~p~glaiD~~---~ 79 (109)
..+++.++|..|.+|+++| .|.||+++.. ..+|.+...+ |.. ..+.. ..+ .-+.|||+++. +
T Consensus 18 ~~~~~a~~l~~P~~~a~~p-dG~l~V~e~~----gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~ 91 (454)
T 1cru_A 18 DKKVILSNLNKPHALLWGP-DNQIWLTERA----TGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNN 91 (454)
T ss_dssp CEEEEECCCSSEEEEEECT-TSCEEEEETT----TCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTS
T ss_pred EEEEEECCCCCceEEEEcC-CCcEEEEEcC----CCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcC
Confidence 3455558999999999999 7899999975 4689998874 543 33332 112 23449999987 9
Q ss_pred CeEEEEeCC------------CCeEEEEeCCCC-----CeEEEE
Q psy959 80 EMLYWTDAV------------REKIERSDLAGN-----NREALY 106 (109)
Q Consensus 80 ~~lYw~D~~------------~~~I~~~~~dG~-----~~~~l~ 106 (109)
+.||+++.. ..+|.+..+++. ..++|+
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~ 135 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLL 135 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEE
Confidence 999999863 358999888653 345555
No 55
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.21 E-value=5e-06 Score=58.19 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=59.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCc--EEEEeCCCCCceeEEEecCCCeEEEEe----CCCCeEEE
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLK--KVIIEKDLSQPSGLAIDFDDEMLYWTD----AVREKIER 94 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~--~~l~~~~~~~p~glaiD~~~~~lYw~D----~~~~~I~~ 94 (109)
..|.+++++|..++||+++ ..|.+.+.+.... ..++......|.++++|+.+++||.++ ...+.|.+
T Consensus 225 ~~p~~la~~~d~~~lyv~~-------~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWIN-------NDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp CCCEEEEECTTSCEEEEES-------SSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred CCceeEEEecCCCEEEEEc-------cEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence 4799999999889999985 2788888754332 111222246899999999999999999 77889999
Q ss_pred EeCCCCCeEEE
Q psy959 95 SDLAGNNREAL 105 (109)
Q Consensus 95 ~~~dG~~~~~l 105 (109)
.+.+|+..+.+
T Consensus 298 ~d~~g~~~~~i 308 (328)
T 3dsm_A 298 YSPQGKLIDEF 308 (328)
T ss_dssp ECTTCCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99998766554
No 56
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.20 E-value=5.1e-06 Score=59.90 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=59.8
Q ss_pred CCCCcceEEeeCCCCeEEEEecCC-------------CCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGR-------------FGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~-------------~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
.+..|+.+++|+ .|.+|.++..- ....+.+++.+.. ..+++ ..++..|+||++++..+.||++
T Consensus 163 ~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~-~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 163 LLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVV-AEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp TCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEE-EEEESSEEEEEECTTSSEEEEE
T ss_pred CCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEe-ecCCcccCcceECCCCCEEEEE
Confidence 378899999999 78888776420 0124678887652 34443 4568999999999999999999
Q ss_pred eCCCCeEEEEeCCC
Q psy959 86 DAVREKIERSDLAG 99 (109)
Q Consensus 86 D~~~~~I~~~~~dG 99 (109)
|....+|.+.++++
T Consensus 239 dt~~~~I~~~~~~~ 252 (355)
T 3sre_A 239 ELLAHKIHVYEKHA 252 (355)
T ss_dssp EGGGTEEEEEEECT
T ss_pred eCCCCeEEEEEECC
Confidence 99999999999874
No 57
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.19 E-value=6.2e-05 Score=51.83 Aligned_cols=83 Identities=14% Similarity=0.051 Sum_probs=63.6
Q ss_pred ecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCC----CeE
Q psy959 17 LQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVR----EKI 92 (109)
Q Consensus 17 i~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~----~~I 92 (109)
......|.++++|+ .|.|||++.. ...|.+.+.++...+.+.......|.+|++|+. ++||+++... ..|
T Consensus 41 ~~~~~~~~~~~~~~-~g~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 41 SKKGLQLEGLNFDR-QGQLFLLDVF----EGNIFKINPETKEIKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp ESSCCCEEEEEECT-TSCEEEEETT----TCEEEEECTTTCCEEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEE
T ss_pred eccCccccCcEECC-CCCEEEEECC----CCEEEEEeCCCCcEEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceE
Confidence 34567899999998 7889999876 579999998866655554334567999999965 5788888765 689
Q ss_pred EEEeCCCCCeEEE
Q psy959 93 ERSDLAGNNREAL 105 (109)
Q Consensus 93 ~~~~~dG~~~~~l 105 (109)
.+.+.++...+.+
T Consensus 115 ~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 115 FAATENGDNLQDI 127 (333)
T ss_dssp EEECTTSCSCEEE
T ss_pred EEEeCCCCEEEEE
Confidence 9999888766533
No 58
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.15 E-value=4.2e-05 Score=51.99 Aligned_cols=83 Identities=23% Similarity=0.223 Sum_probs=61.4
Q ss_pred ccEEEecCCCCcceEEeeCCCCeEEEE-------ecCCCCCCCeEEEEEcCCCCcEEEEeC----CCCCceeEEEecCCC
Q psy959 12 HRSLLLQAIPGRRHFMPPIRLRTLYYT-------DWGRFGTAGKILRTTMAGSLKKVIIEK----DLSQPSGLAIDFDDE 80 (109)
Q Consensus 12 ~~~~li~~l~~p~~iavd~~~g~lyws-------d~~~~~~~~~I~~~~~dG~~~~~l~~~----~~~~p~glaiD~~~~ 80 (109)
..+.+..++..|.++++|+ .|.+|++ +.. ...|.+.+.+....+.+... ....|.++++|+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 9 LFTKVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKP----AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN 83 (314)
T ss_dssp CCEEEECCCTTCEEEEECT-TSCEEEEETTCEETTEE----CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS
T ss_pred hHhhhhccCCCccCceECC-CCCEEEEEeccccCCCC----CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC
Confidence 3455668899999999996 8899999 655 57899988654443333320 235799999998768
Q ss_pred eEEEEeCCCCeEEEEeCCCC
Q psy959 81 MLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 81 ~lYw~D~~~~~I~~~~~dG~ 100 (109)
+||+++... .|.+.+.+|+
T Consensus 84 ~l~v~~~~~-~l~~~d~~g~ 102 (314)
T 1pjx_A 84 QLFVADMRL-GLLVVQTDGT 102 (314)
T ss_dssp EEEEEETTT-EEEEEETTSC
T ss_pred cEEEEECCC-CEEEEeCCCC
Confidence 999998754 7888888754
No 59
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.13 E-value=8.8e-06 Score=58.18 Aligned_cols=71 Identities=21% Similarity=0.130 Sum_probs=54.6
Q ss_pred CCCcceEEeeCCCCeEEEEecCCC---------CCCCeEEEEEcCCCC-------cEEEEeCCCCCceeEEEecCCCeEE
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRF---------GTAGKILRTTMAGSL-------KKVIIEKDLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~---------~~~~~I~~~~~dG~~-------~~~l~~~~~~~p~glaiD~~~~~lY 83 (109)
...|.+|+++| .|+||++..... ....+|.|.+.||+. ...++..++..|.||++|+.++.||
T Consensus 134 ~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~ 212 (354)
T 3a9g_A 134 IHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMV 212 (354)
T ss_dssp SCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEE
T ss_pred CcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEE
Confidence 34688999999 889999964210 114689999999972 2234456789999999999899999
Q ss_pred EEeCCCCe
Q psy959 84 WTDAVREK 91 (109)
Q Consensus 84 w~D~~~~~ 91 (109)
.+|.+...
T Consensus 213 v~d~g~~~ 220 (354)
T 3a9g_A 213 ATEHGPVG 220 (354)
T ss_dssp EEECCSSS
T ss_pred EEecCCCC
Confidence 99997543
No 60
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.13 E-value=4.4e-05 Score=52.66 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=57.0
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeC--------CCCCceeEEEecCCCeEEEEeCCCCe
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEK--------DLSQPSGLAIDFDDEMLYWTDAVREK 91 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~--------~~~~p~glaiD~~~~~lYw~D~~~~~ 91 (109)
+..+.+|++||.++++|..... ...+...+.+|.....+.-. .+.+|.|||+|+. ++||.+... ..
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~----s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~-G~lyIvsE~-n~ 245 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHE----SRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDAS-GNIYIVSEP-NR 245 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETT----TTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTT-CCEEEEETT-TE
T ss_pred cCCceeEEEcCCCCeEEEEECC----CCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCC-CCEEEEcCC-ce
Confidence 4678999999999999999876 68999999999855544322 2469999999975 579999654 47
Q ss_pred EEEEeCCCC
Q psy959 92 IERSDLAGN 100 (109)
Q Consensus 92 I~~~~~dG~ 100 (109)
++++.-+++
T Consensus 246 ~y~f~~~~~ 254 (255)
T 3qqz_A 246 FYRFTPQSS 254 (255)
T ss_dssp EEEEEC---
T ss_pred EEEEEecCC
Confidence 887766543
No 61
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.13 E-value=2.2e-05 Score=56.26 Aligned_cols=71 Identities=14% Similarity=0.030 Sum_probs=58.9
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCC-CeEEEEEcCCCCcEEEEeCC-----CCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTA-GKILRTTMAGSLKKVIIEKD-----LSQPSGLAIDFDDEMLYWTDAVREKIERS 95 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~-~~I~~~~~dG~~~~~l~~~~-----~~~p~glaiD~~~~~lYw~D~~~~~I~~~ 95 (109)
.|.++++|+ .|+.|.++.. . +.|.+.+.||+....+.... ..-++||++++.+..|+..+. .+++.++
T Consensus 138 ~~nDvavD~-~GnaYVt~s~----~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~f 211 (334)
T 2p9w_A 138 GVVQSAQDR-DGNSYVAFAL----GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAF 211 (334)
T ss_dssp EEEEEEECT-TSCEEEEEEE----SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEE
T ss_pred CCceeEECC-CCCEEEeCCC----CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEE
Confidence 478999999 8999999987 6 89999999999766554321 122779999999999999999 8899998
Q ss_pred eCC
Q psy959 96 DLA 98 (109)
Q Consensus 96 ~~d 98 (109)
+++
T Consensus 212 D~~ 214 (334)
T 2p9w_A 212 DVS 214 (334)
T ss_dssp ECS
T ss_pred cCC
Confidence 876
No 62
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.12 E-value=1.6e-05 Score=56.76 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=57.1
Q ss_pred ccEEEecCC-------CCcceEEeeCCCCeEEEEecCCC---------CCCCeEEEEEcCCCC------------cEEEE
Q psy959 12 HRSLLLQAI-------PGRRHFMPPIRLRTLYYTDWGRF---------GTAGKILRTTMAGSL------------KKVII 63 (109)
Q Consensus 12 ~~~~li~~l-------~~p~~iavd~~~g~lywsd~~~~---------~~~~~I~~~~~dG~~------------~~~l~ 63 (109)
..+++++.+ ..|.+|+++| .|+||++..... ...++|.|.+.||+. ...++
T Consensus 114 ~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~ 192 (353)
T 2g8s_A 114 DFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIW 192 (353)
T ss_dssp EEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEE
T ss_pred ceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEE
Confidence 345565433 3478999999 889999974310 113689999999972 23345
Q ss_pred eCCCCCceeEEEecCCCeEEEEeCCC
Q psy959 64 EKDLSQPSGLAIDFDDEMLYWTDAVR 89 (109)
Q Consensus 64 ~~~~~~p~glaiD~~~~~lYw~D~~~ 89 (109)
...+..|.||++|+.+++||.+|.+.
T Consensus 193 a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 193 SYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp EECCSEEEEEEEETTTTEEEEEEECS
T ss_pred EEcCcCccceEEECCCCCEEEEecCC
Confidence 56788999999999899999999874
No 63
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.04 E-value=0.00024 Score=48.74 Aligned_cols=83 Identities=13% Similarity=-0.029 Sum_probs=62.6
Q ss_pred EEe-cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEE
Q psy959 15 LLL-QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIE 93 (109)
Q Consensus 15 ~li-~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~ 93 (109)
.++ .....+.|.+.|+..+.|||+|.. ..+|.+.+.++...+.+.. -..|.++++++..+ ||.+. ...|.
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~----~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~dG~-l~v~~--~~~l~ 76 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIP----AKKVCRWDSFTKQVQRVTM--DAPVSSVALRQSGG-YVATI--GTKFC 76 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETT----TTEEEEEETTTCCEEEEEC--SSCEEEEEEBTTSS-EEEEE--TTEEE
T ss_pred EEeccCCccccCCeEECCCCEEEEEECC----CCEEEEEECCCCcEEEEeC--CCceEEEEECCCCC-EEEEE--CCeEE
Confidence 444 578889999999999999999987 6899999998766554432 35799999997665 66665 46788
Q ss_pred EEeCCCCCeEEEE
Q psy959 94 RSDLAGNNREALY 106 (109)
Q Consensus 94 ~~~~dG~~~~~l~ 106 (109)
+.+.++...+.+.
T Consensus 77 ~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 77 ALNWKEQSAVVLA 89 (297)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEECCCCcEEEEE
Confidence 8888755544443
No 64
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.04 E-value=8.5e-06 Score=57.29 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=50.7
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEc-CCCCcEEEEeC-CCCCceeEEEecCCCeEEEEeCCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTM-AGSLKKVIIEK-DLSQPSGLAIDFDDEMLYWTDAVRE 90 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~-dG~~~~~l~~~-~~~~p~glaiD~~~~~lYw~D~~~~ 90 (109)
..|.++++|+ .|+||.+++. ..+|.+.+. +|.. ..+... .+..|.++++++. ++||.++...+
T Consensus 248 g~pdgia~d~-~G~l~va~~~----~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~ 312 (343)
T 2qe8_A 248 PICDGISIDK-DHNIYVGDLA----HSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLH 312 (343)
T ss_dssp CSCSCEEECT-TCCEEEEEGG----GTEEEEEETTTTEE-EEEEECGGGSCEEEEEECTT-SCEEEEECCGG
T ss_pred CCCceEEECC-CCCEEEEccC----CCeEEEEECCCCCE-EEEEECCceecCCeeEECCC-CcEEEEeCccc
Confidence 4789999999 7999999998 689999999 7764 444443 3788999999975 78999987543
No 65
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.03 E-value=4.9e-05 Score=54.12 Aligned_cols=80 Identities=24% Similarity=0.245 Sum_probs=59.2
Q ss_pred CCCCcceEEeeCC---CCeEEEEecCCCC-CCCeEEEEEcCCC---CcEEEEe------CCCCCceeEEEecCCCeEEEE
Q psy959 19 AIPGRRHFMPPIR---LRTLYYTDWGRFG-TAGKILRTTMAGS---LKKVIIE------KDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 19 ~l~~p~~iavd~~---~g~lywsd~~~~~-~~~~I~~~~~dG~---~~~~l~~------~~~~~p~glaiD~~~~~lYw~ 85 (109)
++..|.+||++|. ++.||+++....+ ...+|.+...++. ..++++. ...+.|.+|++++. ++||++
T Consensus 73 g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~ 151 (352)
T 2ism_A 73 GESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVT 151 (352)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEE
T ss_pred CCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEE
Confidence 4678999999997 7999999975210 0168999998864 2344443 23567899999985 489999
Q ss_pred eCC-------------CCeEEEEeCCC
Q psy959 86 DAV-------------REKIERSDLAG 99 (109)
Q Consensus 86 D~~-------------~~~I~~~~~dG 99 (109)
+.. .++|.+++.||
T Consensus 152 ~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 152 TGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp CCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred ECCCCCCccccCCCCCceEEEEEcCCC
Confidence 742 36999999998
No 66
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.02 E-value=0.00023 Score=48.38 Aligned_cols=82 Identities=11% Similarity=0.106 Sum_probs=60.9
Q ss_pred EEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC--CCC---cEEEEeCCCCCceeEEEecCCCeEEEEeCCC
Q psy959 15 LLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA--GSL---KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVR 89 (109)
Q Consensus 15 ~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d--G~~---~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~ 89 (109)
.+...+..|.+++++|....+ |++.. ..+|.+.+++ |+. .+++ ......|.+|++|+.. +||.+. .
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~l-v~~~~----~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G-~l~v~~--~ 236 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLL-VSDTG----DNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGG-LIWASA--G 236 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEE-EEETT----TTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTS-CEEEEE--T
T ss_pred EeecCCCCCccEEECCCCCEE-EEeCC----CCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCC-CEEEEc--C
Confidence 344677889999999955555 99987 5899999985 443 3444 4445689999999654 688887 6
Q ss_pred CeEEEEeCCCCCeEEE
Q psy959 90 EKIERSDLAGNNREAL 105 (109)
Q Consensus 90 ~~I~~~~~dG~~~~~l 105 (109)
+.|.+.+.+|.....+
T Consensus 237 ~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 237 DGVHVLTPDGDELGRV 252 (296)
T ss_dssp TEEEEECTTSCEEEEE
T ss_pred CeEEEECCCCCEEEEE
Confidence 7899999888765544
No 67
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.92 E-value=0.00027 Score=48.56 Aligned_cols=92 Identities=15% Similarity=0.114 Sum_probs=63.5
Q ss_pred CCCccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEc--CCCCcEE-----EEe-CCCCCceeEEEecCCC
Q psy959 9 LKTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTM--AGSLKKV-----IIE-KDLSQPSGLAIDFDDE 80 (109)
Q Consensus 9 ~G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~--dG~~~~~-----l~~-~~~~~p~glaiD~~~~ 80 (109)
++...+.+...+..|.++++++....||+++.. ...|.+.++ +|..... ... .....|.+|++|+. +
T Consensus 170 ~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~-G 244 (333)
T 2dg1_A 170 DFRTVTPIIQNISVANGIALSTDEKVLWVTETT----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSD-D 244 (333)
T ss_dssp TSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTT-C
T ss_pred CCCEEEEeecCCCcccceEECCCCCEEEEEeCC----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCC-C
Confidence 333333444556679999999965679999876 579999998 4543322 111 12247999999975 5
Q ss_pred eEEEEeCCCCeEEEEeCCCCCeEEE
Q psy959 81 MLYWTDAVREKIERSDLAGNNREAL 105 (109)
Q Consensus 81 ~lYw~D~~~~~I~~~~~dG~~~~~l 105 (109)
+||.++...+.|.+.+.+|...+.+
T Consensus 245 ~l~v~~~~~~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 245 NLYVAMYGQGRVLVFNKRGYPIGQI 269 (333)
T ss_dssp CEEEEEETTTEEEEECTTSCEEEEE
T ss_pred CEEEEEcCCCEEEEECCCCCEEEEE
Confidence 7888887778899998887654443
No 68
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.91 E-value=0.00015 Score=49.18 Aligned_cols=74 Identities=18% Similarity=0.197 Sum_probs=60.3
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
..|.++++|+ .|++|+++.. ...|.+.+.+ |.....+. .....|.++++++..+.||.++...+.|.+.+.+.
T Consensus 226 ~~p~~i~~d~-~G~l~v~~~~----~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 226 GGADGMDFDE-DNNLLVANWG----SSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEEEBT-TCCEEEEEET----TTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCceEECC-CCCEEEEEcC----CCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 5689999998 8899999876 5799999988 76655553 33478999999988878999998888999988764
Q ss_pred C
Q psy959 100 N 100 (109)
Q Consensus 100 ~ 100 (109)
.
T Consensus 300 ~ 300 (314)
T 1pjx_A 300 N 300 (314)
T ss_dssp C
T ss_pred C
Confidence 3
No 69
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.91 E-value=0.00023 Score=49.68 Aligned_cols=76 Identities=16% Similarity=0.157 Sum_probs=54.3
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCC------CCCeEEEEEcCCCC-cEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeE
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFG------TAGKILRTTMAGSL-KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKI 92 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~------~~~~I~~~~~dG~~-~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I 92 (109)
-..|.++++|+ .|++|++..+... ....|.+.+.+... ...+.......|++|++++..++||.++. .|
T Consensus 171 g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v 246 (328)
T 3dsm_A 171 GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DI 246 (328)
T ss_dssp SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SE
T ss_pred CCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EE
Confidence 35799999999 7889999875200 01689998876333 33332222358999999999999999986 77
Q ss_pred EEEeCCC
Q psy959 93 ERSDLAG 99 (109)
Q Consensus 93 ~~~~~dG 99 (109)
...+.+.
T Consensus 247 ~~~d~~t 253 (328)
T 3dsm_A 247 WRMPVEA 253 (328)
T ss_dssp EEEETTC
T ss_pred EEEECCC
Confidence 7777654
No 70
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.83 E-value=9.5e-05 Score=53.24 Aligned_cols=69 Identities=10% Similarity=-0.026 Sum_probs=53.7
Q ss_pred ccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC----cEEEEeCCCCCceeEEEecCCCeEEEEe
Q psy959 12 HRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL----KKVIIEKDLSQPSGLAIDFDDEMLYWTD 86 (109)
Q Consensus 12 ~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~----~~~l~~~~~~~p~glaiD~~~~~lYw~D 86 (109)
..+++.+++..|+||++.|..+.||++|.. ..+|.+.++++.. ++++ . .-..|.|+++|..++.||.+.
T Consensus 212 ~~~~~~~~l~~pNGia~spDg~~lYvadt~----~~~I~~~~~~~~g~l~~~~~~-~-~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 212 DVRVVAEGFDFANGINISPDGKYVYIAELL----AHKIHVYEKHANWTLTPLRVL-S-FDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp CCEEEEEEESSEEEEEECTTSSEEEEEEGG----GTEEEEEEECTTSCEEEEEEE-E-CSSEEEEEEECTTTCCEEEEE
T ss_pred eEEEeecCCcccCcceECCCCCEEEEEeCC----CCeEEEEEECCCCcEecCEEE-e-CCCCCceEEEeCCCCcEEEEe
Confidence 455667889999999999988899999987 6899999986432 3344 3 246899999997667877744
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.80 E-value=0.003 Score=43.13 Aligned_cols=79 Identities=14% Similarity=0.013 Sum_probs=58.3
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC-cEEEEeCCCC--------CceeEEEecCCCeEEEEeC-CC
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL-KKVIIEKDLS--------QPSGLAIDFDDEMLYWTDA-VR 89 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~-~~~l~~~~~~--------~p~glaiD~~~~~lYw~D~-~~ 89 (109)
-..|.++++++..+++|+++.. ...|...+.+... ...+-..... .|.++++++..+++|.++. ..
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTV----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETT----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred CCCcceEEECCCCCEEEEEecC----CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 3568999999977789999986 5799999986444 3443322212 2889999999999999995 46
Q ss_pred CeEEEEeCCCCCe
Q psy959 90 EKIERSDLAGNNR 102 (109)
Q Consensus 90 ~~I~~~~~dG~~~ 102 (109)
+.|...+.+....
T Consensus 164 ~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 164 SVIWVVDGGNIKL 176 (353)
T ss_dssp CEEEEEETTTTEE
T ss_pred ceEEEEcCCCCce
Confidence 7788888765443
No 72
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.77 E-value=0.00056 Score=47.63 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=61.0
Q ss_pred ecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC---C-C--CcEEEEeC--CCCCceeEEEecCCCeEEEEeCC
Q psy959 17 LQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA---G-S--LKKVIIEK--DLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 17 i~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d---G-~--~~~~l~~~--~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
...+..|.++++++....|||++.. ...|.+.+.+ | . .++++... ....|.++++|.. +.||.+...
T Consensus 175 ~~~~~~~~~i~~s~dg~~lyv~~~~----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~-G~lwva~~~ 249 (326)
T 2ghs_A 175 FADISIPNSICFSPDGTTGYFVDTK----VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE-GHIWNARWG 249 (326)
T ss_dssp EEEESSEEEEEECTTSCEEEEEETT----TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT-SCEEEEEET
T ss_pred eCCCcccCCeEEcCCCCEEEEEECC----CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC-CCEEEEEeC
Confidence 3456778999999977789999976 5899999985 5 2 23444432 2457999999965 478888877
Q ss_pred CCeEEEEeCCCCCeEE
Q psy959 89 REKIERSDLAGNNREA 104 (109)
Q Consensus 89 ~~~I~~~~~dG~~~~~ 104 (109)
.+.|.+.+.+|...+.
T Consensus 250 ~~~v~~~d~~g~~~~~ 265 (326)
T 2ghs_A 250 EGAVDRYDTDGNHIAR 265 (326)
T ss_dssp TTEEEEECTTCCEEEE
T ss_pred CCEEEEECCCCCEEEE
Confidence 7889999887765443
No 73
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.75 E-value=0.00013 Score=52.37 Aligned_cols=76 Identities=20% Similarity=0.158 Sum_probs=56.8
Q ss_pred ccEEEecCC-----CCcceEEeeCCCCeEEEEecCC---------CCCCCeEEEEEcCCC--------CcEEEEeCCCCC
Q psy959 12 HRSLLLQAI-----PGRRHFMPPIRLRTLYYTDWGR---------FGTAGKILRTTMAGS--------LKKVIIEKDLSQ 69 (109)
Q Consensus 12 ~~~~li~~l-----~~p~~iavd~~~g~lywsd~~~---------~~~~~~I~~~~~dG~--------~~~~l~~~~~~~ 69 (109)
..++|++.+ ..+..|+++| .|+||++-... ....++|.|.+.||+ .. .++..++.+
T Consensus 126 ~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~-~i~a~G~RN 203 (347)
T 3das_A 126 APDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGS-PVYSYGHRN 203 (347)
T ss_dssp CCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTC-CEEEBCCSB
T ss_pred CcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCC-eEEeeCCCC
Confidence 356666433 3566799999 88999995311 112589999999998 43 356678999
Q ss_pred ceeEEEecCCCeEEEEeCCCC
Q psy959 70 PSGLAIDFDDEMLYWTDAVRE 90 (109)
Q Consensus 70 p~glaiD~~~~~lYw~D~~~~ 90 (109)
|.||++|+ .+.||.+|.+..
T Consensus 204 p~Gla~dp-~G~L~~~d~g~~ 223 (347)
T 3das_A 204 VQGLAWDD-KQRLFASEFGQD 223 (347)
T ss_dssp CCEEEECT-TCCEEEEECCSS
T ss_pred cceEEECC-CCCEEEEecCCC
Confidence 99999999 699999998753
No 74
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.72 E-value=0.00049 Score=47.95 Aligned_cols=73 Identities=22% Similarity=0.302 Sum_probs=55.1
Q ss_pred CcceEEeeCCCCeEEEEecCCC--CCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRF--GTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~--~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
.|.++++|+ .|.+|+++.... .....|++.+ +|+... +. .....|+++++++..+.|||++.....|.+.+++
T Consensus 135 ~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~-~~-~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 135 RSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVTK-LF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEEE-EE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEEE-ee-CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 578899999 788988875310 0136888888 654333 22 3456799999999999999999988999999985
No 75
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.65 E-value=0.00019 Score=53.03 Aligned_cols=75 Identities=23% Similarity=0.208 Sum_probs=56.3
Q ss_pred cEEEecC-----CCCcceEEeeCCCCeEEEEecCCC----------------------------CCCCeEEEEEcCCCC-
Q psy959 13 RSLLLQA-----IPGRRHFMPPIRLRTLYYTDWGRF----------------------------GTAGKILRTTMAGSL- 58 (109)
Q Consensus 13 ~~~li~~-----l~~p~~iavd~~~g~lywsd~~~~----------------------------~~~~~I~~~~~dG~~- 58 (109)
.++|++. ...+.+|++++ .|+||++-.... ...++|.|.+.||+.
T Consensus 131 ~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip 209 (454)
T 1cru_A 131 PVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP 209 (454)
T ss_dssp EEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC
T ss_pred cEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC
Confidence 4566542 35588999999 889999954210 014789999999982
Q ss_pred ---------cEEEEeCCCCCceeEEEecCCCeEEEEeCCC
Q psy959 59 ---------KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVR 89 (109)
Q Consensus 59 ---------~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~ 89 (109)
+..++..++.+|.||++|+ ++.||.+|.+.
T Consensus 210 ~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~ 248 (454)
T 1cru_A 210 KDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGP 248 (454)
T ss_dssp TTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECS
T ss_pred CCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCC
Confidence 2345667899999999999 69999999864
No 76
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.51 E-value=0.0029 Score=43.52 Aligned_cols=75 Identities=17% Similarity=0.079 Sum_probs=59.7
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
..+.||+.||..+.||..... .+.|.+.+.+|...+.+...+...+.|||++ ..+++|.++.+.+++....++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~----~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK----PAAIVEMTTNGDLIRTIPLDFVKDLETIEYI-GDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET----TEEEEEEETTCCEEEEEECSSCSSEEEEEEC-STTEEEEEETTTTEEEEEEECTT
T ss_pred cCcceeEEeCCCCEEEEEECC----CCeEEEEeCCCCEEEEEecCCCCChHHeEEe-CCCEEEEEECCCCcEEEEEcCCC
Confidence 678999999988899876555 5899999999887776655667889999998 45577778877888888776543
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.51 E-value=0.003 Score=43.77 Aligned_cols=74 Identities=14% Similarity=0.107 Sum_probs=55.3
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCc-------------EEEEeCCCCCceeEEEecCCCeEEEEeCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLK-------------KVIIEKDLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~-------------~~l~~~~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
.|.+++++|...+||.++.. ...|....++.... ..+.......|.++++++..++||.++..
T Consensus 156 ~~~~~~~spdg~~l~~~~~~----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLG----TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp CEEEEEECTTSSEEEEEETT----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cceEEEECCCCCEEEEEeCC----CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence 34779999966679999986 57888887764331 22223345679999999999999999987
Q ss_pred CCeEEEEeCCC
Q psy959 89 REKIERSDLAG 99 (109)
Q Consensus 89 ~~~I~~~~~dG 99 (109)
...|...+++.
T Consensus 232 ~~~v~v~~~~~ 242 (361)
T 3scy_A 232 GGTVIAFRYAD 242 (361)
T ss_dssp TCEEEEEEEET
T ss_pred CCeEEEEEecC
Confidence 78888887763
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.48 E-value=0.01 Score=40.34 Aligned_cols=76 Identities=9% Similarity=0.040 Sum_probs=56.9
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCCCCCe-EEEEEcCCCCcE-----EEEeCCCCCceeEEEecCCCeEEEEeCCCCeE
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFGTAGK-ILRTTMAGSLKK-----VIIEKDLSQPSGLAIDFDDEMLYWTDAVREKI 92 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~~~~~-I~~~~~dG~~~~-----~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I 92 (109)
.-..|.+++++|...++|.++.. ... |...+++..... ..+ .....|.++++++..++||.+......|
T Consensus 126 ~~~~~~~~~~spdg~~l~~~~~~----~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 126 IPYDAVGIAISPNGNGLILIDRS----SANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp CCTTEEEEEECTTSSCEEEEEET----TTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCCCccceEECCCCCEEEEEecC----CCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeE
Confidence 34678999999976689999886 355 777776543221 112 2345799999999999999999988899
Q ss_pred EEEeCCC
Q psy959 93 ERSDLAG 99 (109)
Q Consensus 93 ~~~~~dG 99 (109)
...+++.
T Consensus 201 ~v~d~~~ 207 (331)
T 3u4y_A 201 GILETQN 207 (331)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9998863
No 79
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.46 E-value=0.0028 Score=43.66 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=58.0
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe--CCCCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE--KDLSQPSGLAIDFDDEMLYWTDAVREKIERS 95 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~--~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~ 95 (109)
.....|.+++++| .|.||.++... ....|...++++...+.+.. .....|.++++++..+.||.++...+.|...
T Consensus 37 ~~~~~p~~~a~sp-dg~l~~~~~~~--~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSA-KDCLYSVDKED--DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EECSCCCCEEECT-TCEEEEEEEET--TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eccCCcceEEEcc-CCeEEEEEecC--CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 4568899999999 66799988621 14788888886544333322 2357899999999999999999877777777
Q ss_pred eCC
Q psy959 96 DLA 98 (109)
Q Consensus 96 ~~d 98 (109)
+++
T Consensus 114 ~~~ 116 (347)
T 3hfq_A 114 KIA 116 (347)
T ss_dssp EEC
T ss_pred EeC
Confidence 664
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.43 E-value=0.012 Score=40.05 Aligned_cols=75 Identities=12% Similarity=0.051 Sum_probs=55.8
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeC----CCCCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEK----DLSQPSGLAIDFDDEMLYWTDAVREKIERSD 96 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~----~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~ 96 (109)
..|.+++++|..+++|.++. ...|...++........+.. ....|.++++++..+.||.++...+.|...+
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNA-----DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp TTCCCCEEETTTTEEEEECT-----TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred CccceEEECCCCCEEEEEcC-----CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 45899999998888998875 37888888754332222222 2346778999999999999998888999988
Q ss_pred CCCC
Q psy959 97 LAGN 100 (109)
Q Consensus 97 ~dG~ 100 (109)
....
T Consensus 260 ~~~~ 263 (353)
T 3vgz_A 260 TRNG 263 (353)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8543
No 81
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.40 E-value=0.0029 Score=43.57 Aligned_cols=73 Identities=10% Similarity=0.091 Sum_probs=54.4
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC-CcEEEE--eCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS-LKKVII--EKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~-~~~~l~--~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
.|.+++++|...+||.++.. ...|...+++.. ..+.+. ......|.++++++..++||.++...+.|....+|
T Consensus 241 ~~~~i~~spdG~~l~v~~~~----~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRG----YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECTTSCEEEEEEET----TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cceeEEECCCCCEEEEEeCC----CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 47789999977789999876 578888887622 222221 22245799999999999999999987888777555
No 82
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.38 E-value=0.0084 Score=40.55 Aligned_cols=76 Identities=11% Similarity=0.058 Sum_probs=56.4
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC--CCCcEEEEe-CCCCCceeEEEecCCCeEEEEeCCCCeEEE
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA--GSLKKVIIE-KDLSQPSGLAIDFDDEMLYWTDAVREKIER 94 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d--G~~~~~l~~-~~~~~p~glaiD~~~~~lYw~D~~~~~I~~ 94 (109)
.....|.+++++|...+||++... ...|...+++ +...+.+.. .....|.++++++.++.||.+....+.|..
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRP----EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETT----TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecC----CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 445689999999977789999875 4788887776 333332221 123389999999999999999987777777
Q ss_pred EeC
Q psy959 95 SDL 97 (109)
Q Consensus 95 ~~~ 97 (109)
.++
T Consensus 111 ~d~ 113 (343)
T 1ri6_A 111 TRL 113 (343)
T ss_dssp EEE
T ss_pred EEC
Confidence 776
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.37 E-value=0.0069 Score=41.15 Aligned_cols=77 Identities=5% Similarity=-0.082 Sum_probs=59.5
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCC---cEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEE
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSL---KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIER 94 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~---~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~ 94 (109)
.-..|.+++++|..+++|.++.. ...|...+++ |.. ...+- .-..|.++++++..+.||.+......|..
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~----~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLI----GNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETT----TTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred CCCCccceEECCCCCEEEEEeCC----CCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 34679999999966679999876 5889999986 554 33332 24689999999999999999887778888
Q ss_pred EeCCCCC
Q psy959 95 SDLAGNN 101 (109)
Q Consensus 95 ~~~dG~~ 101 (109)
.+.....
T Consensus 248 ~d~~~~~ 254 (331)
T 3u4y_A 248 FNQLSGT 254 (331)
T ss_dssp EETTTTE
T ss_pred EECCCCc
Confidence 8876543
No 84
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.30 E-value=0.0083 Score=41.97 Aligned_cols=75 Identities=17% Similarity=0.142 Sum_probs=55.9
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC--CCCcEEE-Ee-C-CCCCceeEEEecCCCeEEEEeCCCCeEEE
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA--GSLKKVI-IE-K-DLSQPSGLAIDFDDEMLYWTDAVREKIER 94 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d--G~~~~~l-~~-~-~~~~p~glaiD~~~~~lYw~D~~~~~I~~ 94 (109)
...|.+++++|...+||.++.+ ...|...+++ |.....- +. . ....|.++++++..++||.+......|..
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~----~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 219 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLT----ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETT----TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCcceEEEECCCCCEEEEEcCC----CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEE
Confidence 4678999999976689999876 5789998886 3322111 12 1 14579999999999999999887778877
Q ss_pred EeCC
Q psy959 95 SDLA 98 (109)
Q Consensus 95 ~~~d 98 (109)
.+++
T Consensus 220 ~~~~ 223 (365)
T 1jof_A 220 YVID 223 (365)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7665
No 85
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.23 E-value=0.0058 Score=43.70 Aligned_cols=75 Identities=15% Similarity=0.090 Sum_probs=56.8
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCC-------CceeEEE---ecCCCeEEE-EeC
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLS-------QPSGLAI---DFDDEMLYW-TDA 87 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~-------~p~glai---D~~~~~lYw-~D~ 87 (109)
.-.-|.+++-|...+.+|+++.. .++|.+.+.++.....+.-..+. +|.||.+ |+. ++|+. ++.
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~----~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~ 85 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLY----KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKN 85 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETT----TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEE
T ss_pred cccCCcCccCcCCCCEEEEEecc----CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcc
Confidence 34679999999999999999987 69999999986554444323322 6789999 777 78877 552
Q ss_pred ------------CCCeEEEEeCC
Q psy959 88 ------------VREKIERSDLA 98 (109)
Q Consensus 88 ------------~~~~I~~~~~d 98 (109)
+...+.+.+++
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~ 108 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLP 108 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESS
T ss_pred cccccccccccCCCCEEEEEcCC
Confidence 24678888988
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.22 E-value=0.023 Score=39.40 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=60.0
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
..-..|.++++.|...+||++... ...|...++........+.. -..|.++++++..++||.+....+.|...++
T Consensus 29 ~~~~~~~~~~~s~dg~~l~~~~~~----d~~i~v~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 29 PVGSNPMGAVISPDGTKVYVANAH----SNDVSIIDTATNNVIATVPA-GSSPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp ECSSSEEEEEECTTSSEEEEEEGG----GTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ecCCCcceEEECCCCCEEEEECCC----CCeEEEEECCCCeEEEEEEC-CCCccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 344568999999977789999866 58899988854333222322 2389999999999999999888788988888
Q ss_pred CCCCe
Q psy959 98 AGNNR 102 (109)
Q Consensus 98 dG~~~ 102 (109)
.....
T Consensus 104 ~~~~~ 108 (391)
T 1l0q_A 104 TSNTV 108 (391)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 75543
No 87
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.21 E-value=0.0079 Score=41.57 Aligned_cols=73 Identities=14% Similarity=0.056 Sum_probs=54.6
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
..|.|+++++. |.||.+.... ..+.|.+.++. |.-...+.......+.|++++ .++||.+.+..+.+...+.+
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~--~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLY--GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp CCEEEEEECST-TEEEEEECST--TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred CCcccEEEeCC-CeEEEECCCC--CCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 35789999984 8999997531 15899999986 555555443344466778887 78999999998899888875
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.18 E-value=0.013 Score=40.53 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=56.2
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-----CCCCCceeEEEecCCCeEEEEeCC-CCeE
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-----KDLSQPSGLAIDFDDEMLYWTDAV-REKI 92 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-----~~~~~p~glaiD~~~~~lYw~D~~-~~~I 92 (109)
.-..|++++++|...++|.++.. ...|...+++....+.+.. .....|.++++++..++||.++.. ...|
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEI----GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETT----TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred CCCCCeEEEEcCCCCEEEEEcCC----CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 34678999999976789999865 5788888886332222221 123567899999999999999988 7888
Q ss_pred EEEeCC
Q psy959 93 ERSDLA 98 (109)
Q Consensus 93 ~~~~~d 98 (109)
...+++
T Consensus 285 ~v~~~~ 290 (361)
T 3scy_A 285 AIFKVD 290 (361)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 887775
No 89
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.16 E-value=0.01 Score=42.76 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=56.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC--C-cEEEEe---CCCC-CceeEEEecCC---CeEEEEeCCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS--L-KKVIIE---KDLS-QPSGLAIDFDD---EMLYWTDAVRE 90 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~--~-~~~l~~---~~~~-~p~glaiD~~~---~~lYw~D~~~~ 90 (109)
..|.++++|+.+|.||..+.. ..|.+.+.+.. . ++.+.. ..+. .|.||+|.+.. ++||.++.+..
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd-----~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEED-----EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETT-----TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred CCcceEEEcCCCCeEEEeccc-----ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 578999999999999999975 45999996532 2 344432 2333 79999997554 57999998888
Q ss_pred eEEEEeCCCCCe
Q psy959 91 KIERSDLAGNNR 102 (109)
Q Consensus 91 ~I~~~~~dG~~~ 102 (109)
..-..+..++++
T Consensus 255 s~~Vydr~~~~~ 266 (355)
T 3amr_A 255 SYAIYDRQGKNK 266 (355)
T ss_dssp EEEEEESSTTCC
T ss_pred EEEEEECCCCCc
Confidence 888877776543
No 90
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.12 E-value=0.015 Score=42.25 Aligned_cols=84 Identities=15% Similarity=0.232 Sum_probs=62.6
Q ss_pred CCcceEEeeCC----CCeEEEEecCCCCCCCeEEEEE---c-CCC---CcEEEEeCC-CCCceeEEEecCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIR----LRTLYYTDWGRFGTAGKILRTT---M-AGS---LKKVIIEKD-LSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 21 ~~p~~iavd~~----~g~lywsd~~~~~~~~~I~~~~---~-dG~---~~~~l~~~~-~~~p~glaiD~~~~~lYw~D~~ 88 (109)
....|||+.|. .+.|||+... ..+.++.. + +++ ..+.+-... ..+..++++|..++.||+++..
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~pls----s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~ 295 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGS----AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN 295 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESS----CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS
T ss_pred cCceEEEecCCcCCCCeEEEEEECC----CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc
Confidence 46678999987 7899999987 46788886 2 332 234444432 3455678999889999999999
Q ss_pred CCeEEEEeCCC-----CCeEEEEeC
Q psy959 89 REKIERSDLAG-----NNREALYLN 108 (109)
Q Consensus 89 ~~~I~~~~~dG-----~~~~~l~~~ 108 (109)
...|.+.+-++ .+..+++.+
T Consensus 296 ~~aI~~w~~~~~~~~~~n~~~l~~d 320 (381)
T 3q6k_A 296 TKQVSCWNTQKMPLRMKNTDVVYTS 320 (381)
T ss_dssp SSEEEEEETTSCSBCGGGEEEEEEC
T ss_pred CCeEEEEeCCCCccccCceEEEEEC
Confidence 99999999988 456776654
No 91
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.08 E-value=0.0051 Score=42.53 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=55.4
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCC------------CCCceeEEEecCCCeEEEEeCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKD------------LSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~------------~~~p~glaiD~~~~~lYw~D~~ 88 (109)
.|+.+... .|.+|.+.+. ...|.+.+.. |.-...|-... ...|+|||+|+.++++|.+...
T Consensus 153 ~~nele~~--dg~lyvn~~~----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 153 RLNELEYI--NGEVWANIWQ----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp CEEEEEEE--TTEEEEEETT----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred cceeEEEE--CCEEEEecCC----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 46666655 6899988876 5899999995 55555553221 2578999999999999999999
Q ss_pred CCeEEEEeCCCC
Q psy959 89 REKIERSDLAGN 100 (109)
Q Consensus 89 ~~~I~~~~~dG~ 100 (109)
..++..+++...
T Consensus 227 ~~~v~~i~l~~~ 238 (266)
T 2iwa_A 227 WPKLFEIKLHLV 238 (266)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEecc
Confidence 888888876543
No 92
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.05 E-value=0.019 Score=38.73 Aligned_cols=78 Identities=13% Similarity=0.188 Sum_probs=58.5
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCC--CCcE----EEEeCCCCCceeEEEecCCCeEEEEeCCCCe
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAG--SLKK----VIIEKDLSQPSGLAIDFDDEMLYWTDAVREK 91 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG--~~~~----~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~ 91 (109)
.....|.+++++|...+||.++.. ...|...+++. .... .+.......|.++++++..+.||.++.....
T Consensus 126 ~~~~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~ 201 (343)
T 1ri6_A 126 EGLDGCHSANISPDNRTLWVPALK----QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS 201 (343)
T ss_dssp CCCTTBCCCEECTTSSEEEEEEGG----GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred cCCCCceEEEECCCCCEEEEecCC----CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE
Confidence 345678999999977789999855 57888888864 2222 1222234579999999999999999988888
Q ss_pred EEEEeCCC
Q psy959 92 IERSDLAG 99 (109)
Q Consensus 92 I~~~~~dG 99 (109)
|...+++.
T Consensus 202 i~~~~~~~ 209 (343)
T 1ri6_A 202 VDVWELKD 209 (343)
T ss_dssp EEEEESSC
T ss_pred EEEEEecC
Confidence 98888864
No 93
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.97 E-value=0.0076 Score=44.85 Aligned_cols=62 Identities=21% Similarity=0.293 Sum_probs=47.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCC----------------CceeEEEecCCCeEE
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLS----------------QPSGLAIDFDDEMLY 83 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~----------------~p~glaiD~~~~~lY 83 (109)
..|.+|++.+..++||.++++ ...|.+.+.+ ....+.+-..... .|+++++++..++||
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg----~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~Ly 396 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWG----IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVY 396 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETT----TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEE
T ss_pred CceeEEEECCCCCEEEEEeCC----CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEE
Confidence 458899999999999999998 5889998874 4333333221111 599999999999999
Q ss_pred EEe
Q psy959 84 WTD 86 (109)
Q Consensus 84 w~D 86 (109)
++.
T Consensus 397 VaN 399 (462)
T 2ece_A 397 VTN 399 (462)
T ss_dssp EEC
T ss_pred EEc
Confidence 999
No 94
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.90 E-value=0.0057 Score=42.32 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=50.1
Q ss_pred eCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCC-----------CCCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy959 29 PIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKD-----------LSQPSGLAIDFDDEMLYWTDAVREKIERSD 96 (109)
Q Consensus 29 d~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~-----------~~~p~glaiD~~~~~lYw~D~~~~~I~~~~ 96 (109)
++..|.||...+. ...|.+.+.. |.-...|-... ...|+|||.|+.+++||.+-..-.++..+.
T Consensus 178 e~~~G~lyan~w~----~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~ 253 (262)
T 3nol_A 178 EWVDGEIFANVWQ----TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEIT 253 (262)
T ss_dssp EEETTEEEEEETT----SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEEEcc----CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEE
Confidence 3448899988887 5799998884 55555554322 247899999999999999999888887776
Q ss_pred CC
Q psy959 97 LA 98 (109)
Q Consensus 97 ~d 98 (109)
+.
T Consensus 254 ~~ 255 (262)
T 3nol_A 254 LT 255 (262)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 95
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.87 E-value=0.0043 Score=47.43 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=50.2
Q ss_pred CCCCcceEEeeCCCCeEEE-EecCCC-------CCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeC
Q psy959 19 AIPGRRHFMPPIRLRTLYY-TDWGRF-------GTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA 87 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lyw-sd~~~~-------~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~ 87 (109)
.|+.|..|++|+ .|.||+ +|.... -.+..+++...+ |.-++.+.......|+|+++.|..+.||.+-.
T Consensus 474 ~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 474 MFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 478999999999 799999 886421 013478888875 44444433234578999999999999999864
No 96
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.77 E-value=0.013 Score=40.05 Aligned_cols=68 Identities=19% Similarity=0.151 Sum_probs=51.8
Q ss_pred eeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeC------------CCCCceeEEEecCCCeEEEEeCCCCeEEE
Q psy959 28 PPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEK------------DLSQPSGLAIDFDDEMLYWTDAVREKIER 94 (109)
Q Consensus 28 vd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~------------~~~~p~glaiD~~~~~lYw~D~~~~~I~~ 94 (109)
+++..|.||-..+. ...|.+.+.. |.-...|-.. ...-|+|||.|+.+++||.+-..-.++..
T Consensus 155 Le~~~G~lyanvw~----s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~ 230 (243)
T 3mbr_X 155 LEWVNGELLANVWL----TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYE 230 (243)
T ss_dssp EEEETTEEEEEETT----TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred eEEeCCEEEEEECC----CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEE
Confidence 34458999988876 5789998884 5555555422 22478999999999999999999888888
Q ss_pred EeCCC
Q psy959 95 SDLAG 99 (109)
Q Consensus 95 ~~~dG 99 (109)
+.+..
T Consensus 231 v~~~~ 235 (243)
T 3mbr_X 231 IRLTP 235 (243)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 87754
No 97
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.72 E-value=0.014 Score=42.44 Aligned_cols=62 Identities=5% Similarity=0.082 Sum_probs=48.9
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCC-----CCcEEEEe-CCCCCceeEEEecCCCeEEEEeCCCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAG-----SLKKVIIE-KDLSQPSGLAIDFDDEMLYWTDAVRE 90 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG-----~~~~~l~~-~~~~~p~glaiD~~~~~lYw~D~~~~ 90 (109)
.++++|+.+|.||+++.. ...|.+.+.++ .+..++.. ..+.+|.++++|. .+.||......+
T Consensus 278 ~~~~~D~~~G~ly~~~~~----~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 278 IALAYDPKTKVIFFAEAN----TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMSNGFP 345 (381)
T ss_dssp EEEEECTTTCEEEEEESS----SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEECSCC
T ss_pred ceEEEeCCCCeEEEEecc----CCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEECcch
Confidence 367898779999999998 68999999988 34466655 4588999999995 567888876543
No 98
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.69 E-value=0.02 Score=42.00 Aligned_cols=78 Identities=12% Similarity=-0.173 Sum_probs=54.1
Q ss_pred CCcceEEeeCCCCeEEEEecCCC----C-CCCeEEEEEcC-CCCcEEEEeC------CCCCceeEEEecCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRF----G-TAGKILRTTMA-GSLKKVIIEK------DLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~----~-~~~~I~~~~~d-G~~~~~l~~~------~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
..| +++++|..+++|.++.... + ....|.+.+.. ++....|... ....|.++++++..++||.+...
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~ 197 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS 197 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC
Confidence 468 9999999999999985200 0 03567777664 3333444322 13579999999999999999875
Q ss_pred -CCeEEEEeCCC
Q psy959 89 -REKIERSDLAG 99 (109)
Q Consensus 89 -~~~I~~~~~dG 99 (109)
...|...+..-
T Consensus 198 ~~~~VsVID~~t 209 (426)
T 3c75_H 198 PAPAVGVVDLEG 209 (426)
T ss_dssp SSCEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 56777777654
No 99
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.66 E-value=0.072 Score=35.72 Aligned_cols=76 Identities=13% Similarity=-0.021 Sum_probs=55.1
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC-cEEEEeCCC----CCceeEEEecCCCeEEEEeC---------
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL-KKVIIEKDL----SQPSGLAIDFDDEMLYWTDA--------- 87 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~-~~~l~~~~~----~~p~glaiD~~~~~lYw~D~--------- 87 (109)
.|.+++++|..+.+|.++.. ...|...++.... ...+..... ..|.++++++..++||.++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNK----SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETT----TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCC----CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccc
Confidence 59999999976789999875 5789999986433 333322111 16899999999999999962
Q ss_pred --CCCeEEEEeCCCCC
Q psy959 88 --VREKIERSDLAGNN 101 (109)
Q Consensus 88 --~~~~I~~~~~dG~~ 101 (109)
....|...+.++..
T Consensus 111 ~~~~~~i~v~d~~~~~ 126 (337)
T 1pby_B 111 EVQPTRVALYDAETLS 126 (337)
T ss_dssp EECCCEEEEEETTTTE
T ss_pred cccCceEEEEECCCCc
Confidence 24678888876543
No 100
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.65 E-value=0.062 Score=36.32 Aligned_cols=74 Identities=19% Similarity=0.092 Sum_probs=53.8
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCC------CCCceeEEEecCCCeEEEEeCC-------
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKD------LSQPSGLAIDFDDEMLYWTDAV------- 88 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~------~~~p~glaiD~~~~~lYw~D~~------- 88 (109)
.|.++++.|..+.+|.+... ...|...+++.......+... ...|.++++++.+++||.+...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~----~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNH----YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETT----TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCC----CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccc
Confidence 68999999966679988865 588999988644333223211 2238999999999999999843
Q ss_pred ----CCeEEEEeCCC
Q psy959 89 ----REKIERSDLAG 99 (109)
Q Consensus 89 ----~~~I~~~~~dG 99 (109)
...|...++..
T Consensus 120 ~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 120 YVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEECCCEEEEEEGGG
T ss_pred cccCCCeEEEEECCC
Confidence 46787777654
No 101
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.64 E-value=0.0091 Score=41.46 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=49.9
Q ss_pred eCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeC------------CCCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy959 29 PIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEK------------DLSQPSGLAIDFDDEMLYWTDAVREKIERS 95 (109)
Q Consensus 29 d~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~------------~~~~p~glaiD~~~~~lYw~D~~~~~I~~~ 95 (109)
++..|.||...+. ...|.+.+.. |.-...|-.. ....|+|||.|+.+++||.+-..-.+++.+
T Consensus 187 e~~dG~lyanvw~----s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 187 ECANGVIYANIWH----SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp EEETTEEEEEETT----CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred EEeCCEEEEEECC----CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 4458999988877 5799999884 5545555432 124789999999999999999988888877
Q ss_pred eC
Q psy959 96 DL 97 (109)
Q Consensus 96 ~~ 97 (109)
.+
T Consensus 263 ~~ 264 (268)
T 3nok_A 263 RL 264 (268)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 102
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.63 E-value=0.053 Score=39.05 Aligned_cols=74 Identities=20% Similarity=0.156 Sum_probs=51.2
Q ss_pred CCCCcceEEe--eCCCCe--EEEEecCCCCCCCeEEEEEc----CCCCcEEEEe--CCCCCceeEEEecCCCeEEEEeCC
Q psy959 19 AIPGRRHFMP--PIRLRT--LYYTDWGRFGTAGKILRTTM----AGSLKKVIIE--KDLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 19 ~l~~p~~iav--d~~~g~--lywsd~~~~~~~~~I~~~~~----dG~~~~~l~~--~~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
.+..|.|+++ ++.++. +|.++. .+++....+ +|.....++. .--.+|.|+++|+..++||.++..
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~k-----~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTGK-----EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEECS-----SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCeeEEEEEecCCCCcEEEEEECC-----CCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc
Confidence 3478899999 887774 666654 356666444 2322222222 123589999999999999999998
Q ss_pred CCeEEEEeCC
Q psy959 89 REKIERSDLA 98 (109)
Q Consensus 89 ~~~I~~~~~d 98 (109)
.+ |.+.+.+
T Consensus 201 ~G-Iw~~da~ 209 (355)
T 3amr_A 201 EA-IWKFSAE 209 (355)
T ss_dssp TE-EEEEECS
T ss_pred ce-EEEEeCC
Confidence 55 9999855
No 103
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.60 E-value=0.094 Score=36.26 Aligned_cols=77 Identities=16% Similarity=0.096 Sum_probs=58.5
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
-..|.++++.|....||++... ...|...++........+.. -..|.++++++..+.||.+....+.|...++..
T Consensus 115 ~~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 115 GKSPLGLALSPDGKKLYVTNNG----DKTVSVINTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETT----TTEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCcceEEECCCCCEEEEEeCC----CCEEEEEECCCCcEEEEEec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 3568899999977789888876 58999998864443333332 357899999999999999988778888888765
Q ss_pred CC
Q psy959 100 NN 101 (109)
Q Consensus 100 ~~ 101 (109)
..
T Consensus 190 ~~ 191 (391)
T 1l0q_A 190 NS 191 (391)
T ss_dssp TE
T ss_pred Ce
Confidence 43
No 104
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.59 E-value=0.021 Score=39.89 Aligned_cols=79 Identities=16% Similarity=0.105 Sum_probs=55.2
Q ss_pred CcceEE-eeCCCCeEEEEecCCC-CCCCeEEEEEcC--CCCcEE--EEeCCCCCceeEEEec---CCCeEEEEeCCCCeE
Q psy959 22 GRRHFM-PPIRLRTLYYTDWGRF-GTAGKILRTTMA--GSLKKV--IIEKDLSQPSGLAIDF---DDEMLYWTDAVREKI 92 (109)
Q Consensus 22 ~p~~ia-vd~~~g~lywsd~~~~-~~~~~I~~~~~d--G~~~~~--l~~~~~~~p~glaiD~---~~~~lYw~D~~~~~I 92 (109)
.|.+++ ++|..++||.++.... .....|...+++ |..... +.......|.+++++| ..++||.+....+.|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 478899 9997778998886520 001278888775 433222 2222345799999999 688999998877888
Q ss_pred EEEeCCCC
Q psy959 93 ERSDLAGN 100 (109)
Q Consensus 93 ~~~~~dG~ 100 (109)
...+.++.
T Consensus 335 ~v~~~~~~ 342 (365)
T 1jof_A 335 EIYRWKDE 342 (365)
T ss_dssp EEEEEETT
T ss_pred EEEEEchh
Confidence 88888776
No 105
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.59 E-value=0.0096 Score=44.14 Aligned_cols=82 Identities=11% Similarity=0.076 Sum_probs=55.9
Q ss_pred cEEEecCCCCcceEEeeCCC-CeEEEEecCCCCCCCeEEEEEcCCCC-cEEEEe------CC-----CCCceeEEEecC-
Q psy959 13 RSLLLQAIPGRRHFMPPIRL-RTLYYTDWGRFGTAGKILRTTMAGSL-KKVIIE------KD-----LSQPSGLAIDFD- 78 (109)
Q Consensus 13 ~~~li~~l~~p~~iavd~~~-g~lywsd~~~~~~~~~I~~~~~dG~~-~~~l~~------~~-----~~~p~glaiD~~- 78 (109)
.+++.++|..|.+|++.|.. ++||+++.. .+|.+...+|.. ...+.. .. ..-+.|||++|.
T Consensus 6 v~~va~gL~~P~~~a~~pdG~~rl~V~er~-----G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f 80 (463)
T 2wg3_C 6 IQEVVSGLRQPVGALHSGDGSQRLFILEKE-----GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNY 80 (463)
T ss_dssp EEEEEEEESSEEEEECCSSSSCCEEEEETT-----TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTH
T ss_pred EEEeccCCCCceEEEECCCCCeEEEEEeCC-----ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCC
Confidence 35556899999999999943 269999864 789988777753 222221 11 234678999986
Q ss_pred --CCeEEEEeCC------------CCeEEEEeCCC
Q psy959 79 --DEMLYWTDAV------------REKIERSDLAG 99 (109)
Q Consensus 79 --~~~lYw~D~~------------~~~I~~~~~dG 99 (109)
++.||++-.. ..+|.+..++.
T Consensus 81 ~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~ 115 (463)
T 2wg3_C 81 KKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSR 115 (463)
T ss_dssp HHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCT
T ss_pred cCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcC
Confidence 7788887542 13788888763
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.46 E-value=0.042 Score=37.19 Aligned_cols=73 Identities=12% Similarity=-0.018 Sum_probs=53.2
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC-cEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL-KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGNN 101 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~-~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~~ 101 (109)
.|+++.+ .+.+|.+... ...|.+.+.+... ...+-......|.++++++..+.+|.+....+.|...+++...
T Consensus 3 ~g~~~~~-~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 3 TGPALKA-GHEYMIVTNY----PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp -CCCCCT-TCEEEEEEET----TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccccccC-CCEEEEEeCC----CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 4666666 7889998877 6899999886433 3333222223699999999988999999888899999887543
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.39 E-value=0.12 Score=36.32 Aligned_cols=81 Identities=20% Similarity=0.192 Sum_probs=57.1
Q ss_pred cCCCCcceEEeeCCCCeEEEEecCCCC----------CCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeC
Q psy959 18 QAIPGRRHFMPPIRLRTLYYTDWGRFG----------TAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA 87 (109)
Q Consensus 18 ~~l~~p~~iavd~~~g~lywsd~~~~~----------~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~ 87 (109)
.....|.+++++|....||.+...... ..+.|...++........+.. ...|.++++++.++.||.+..
T Consensus 342 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 342 PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET
T ss_pred cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC
Confidence 334668899999977778888764210 014888888854333333332 457999999999999999988
Q ss_pred CCCeEEEEeCCC
Q psy959 88 VREKIERSDLAG 99 (109)
Q Consensus 88 ~~~~I~~~~~dG 99 (109)
..+.|...+++|
T Consensus 421 ~d~~i~v~~~~~ 432 (433)
T 3bws_A 421 LDHQIRVYRRDG 432 (433)
T ss_dssp TTTEEEEEEETT
T ss_pred CCCeEEEEEecC
Confidence 778888877765
No 108
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.21 E-value=0.24 Score=37.48 Aligned_cols=72 Identities=13% Similarity=-0.054 Sum_probs=52.0
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEe----cCCCeEEEEeCCCCeEEEE
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAID----FDDEMLYWTDAVREKIERS 95 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD----~~~~~lYw~D~~~~~I~~~ 95 (109)
..|.++++.|..+++|.++. ...|...++. .+...+---..-..|.+++++ +..+++|.+....+.|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~-----dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGR-----DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp SCEEEEEECTTSCEEEEEET-----TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CCccceEECCCCCEEEEEcC-----CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 47889999998889998864 4689999984 333222111124579999999 5888999998877777666
Q ss_pred eC
Q psy959 96 DL 97 (109)
Q Consensus 96 ~~ 97 (109)
+.
T Consensus 272 D~ 273 (567)
T 1qks_A 272 DG 273 (567)
T ss_dssp ET
T ss_pred EC
Confidence 53
No 109
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.16 E-value=0.019 Score=42.58 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=48.9
Q ss_pred CcceEEeeCCCCeEEEEecCC-------------CCCCCeEEEEEcCCCC-------------------cEEEEeCCCCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGR-------------FGTAGKILRTTMAGSL-------------------KKVIIEKDLSQ 69 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~-------------~~~~~~I~~~~~dG~~-------------------~~~l~~~~~~~ 69 (109)
....|+++| .|+||++-... ....++|.|.+.||+. +..|+..++.+
T Consensus 140 ~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN 218 (463)
T 2wg3_C 140 LGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD 218 (463)
T ss_dssp CEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS
T ss_pred cCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC
Confidence 345699999 89999994321 1125789999999951 23467778999
Q ss_pred ceeEEEecCCC------eEEEEeC
Q psy959 70 PSGLAIDFDDE------MLYWTDA 87 (109)
Q Consensus 70 p~glaiD~~~~------~lYw~D~ 87 (109)
|.||++|+.++ ++|-+|.
T Consensus 219 p~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 219 PGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp CCBEEEESSCSSTTCSEEEEEECC
T ss_pred cceEEECCCCCCcccceEEEeccc
Confidence 99999999854 6777885
No 110
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.80 E-value=0.074 Score=37.41 Aligned_cols=77 Identities=14% Similarity=0.055 Sum_probs=52.7
Q ss_pred CCcceEEeeCCCCeEEEEecCC----CC-CCCeEEEEEcCC-CCcEEEEeC-----CCCCceeEEEecCCCeEEEEeCC-
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGR----FG-TAGKILRTTMAG-SLKKVIIEK-----DLSQPSGLAIDFDDEMLYWTDAV- 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~----~~-~~~~I~~~~~dG-~~~~~l~~~-----~~~~p~glaiD~~~~~lYw~D~~- 88 (109)
..| +++++|..+++|.++... ++ ....|...+... .....+-.. ....|.++++++..++||.+...
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 467 999999888999997420 00 034688777652 333344321 13579999999999999999865
Q ss_pred CCeEEEEeCC
Q psy959 89 REKIERSDLA 98 (109)
Q Consensus 89 ~~~I~~~~~d 98 (109)
...|...+.+
T Consensus 130 ~~~v~v~d~~ 139 (361)
T 2oiz_A 130 ATSIGIVDVA 139 (361)
T ss_dssp SEEEEEEETT
T ss_pred CCeEEEEECC
Confidence 5677776655
No 111
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.77 E-value=0.32 Score=34.53 Aligned_cols=77 Identities=6% Similarity=-0.255 Sum_probs=52.7
Q ss_pred CCcceEEeeCCCCeEEEEecCC----CC-CCCeEEEEEcC-CCCcEEEEeC------CCCCceeEEEecCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGR----FG-TAGKILRTTMA-GSLKKVIIEK------DLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~----~~-~~~~I~~~~~d-G~~~~~l~~~------~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
..| ++++.|..+++|.++... ++ ....|.+.+.. ++....+-.. ....|.++++++..++||.+...
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~ 145 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC
Confidence 457 999999889999998421 00 13567777775 2222333211 02469999999999999999865
Q ss_pred -CCeEEEEeCCC
Q psy959 89 -REKIERSDLAG 99 (109)
Q Consensus 89 -~~~I~~~~~dG 99 (109)
...|...+ +.
T Consensus 146 ~~~~v~viD-~t 156 (373)
T 2mad_H 146 AGPAVGLVV-QG 156 (373)
T ss_pred CCCeEEEEE-CC
Confidence 57788887 53
No 112
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.76 E-value=0.086 Score=37.85 Aligned_cols=73 Identities=4% Similarity=-0.324 Sum_probs=51.2
Q ss_pred CCcceEEeeCCCCeEEEEecCC----CC-CCCeEEEEEcC-CCCcEEEEeC------CCCCceeEEEecCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGR----FG-TAGKILRTTMA-GSLKKVIIEK------DLSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~----~~-~~~~I~~~~~d-G~~~~~l~~~------~~~~p~glaiD~~~~~lYw~D~~ 88 (109)
..| ++++.|..+++|.++... ++ ....|...++. ++....|-.. ....|.++++++..++||.+...
T Consensus 66 ~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 66 FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC
Confidence 458 999999999999998420 00 13678888875 4444554322 13579999999999999999865
Q ss_pred -CCeEEE
Q psy959 89 -REKIER 94 (109)
Q Consensus 89 -~~~I~~ 94 (109)
...+..
T Consensus 145 ~~~~v~V 151 (368)
T 1mda_H 145 SSAAAGL 151 (368)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 444544
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.75 E-value=0.31 Score=34.12 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=56.1
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCC-----------
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVR----------- 89 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~----------- 89 (109)
..|.+++++|..+.+|.+... ...|...+++.......+. ....|.++++++..+.||.+....
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~----~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMC----CSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETT----TTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred CCcceEEECCCCCEEEEEecC----CCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCcccccccccc
Confidence 467889999966689999876 5899999987544333333 346789999999998999988753
Q ss_pred ---CeEEEEeCCCC
Q psy959 90 ---EKIERSDLAGN 100 (109)
Q Consensus 90 ---~~I~~~~~dG~ 100 (109)
+.|...+....
T Consensus 378 ~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 378 LVLGKVYVIDTTTD 391 (433)
T ss_dssp SSCCEEEEEETTTT
T ss_pred ccceEEEEEECCCC
Confidence 37888877543
No 114
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.66 E-value=0.15 Score=36.38 Aligned_cols=80 Identities=8% Similarity=0.021 Sum_probs=58.2
Q ss_pred cceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCC--CeEEEEeCCCC
Q psy959 23 RRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVR--EKIERSDLAGN 100 (109)
Q Consensus 23 p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~--~~I~~~~~dG~ 100 (109)
..++++.|...+|+++.... ....|...++++...+.+... ..+..+++.+....|+++.... ..|...+++|.
T Consensus 313 ~~~~~~spdG~~l~~~~~~~--g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNG--GQQHIAKQDLATGGVQVLSST--FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEECTTSSEEEEEEECS--SCEEEEEEETTTCCEEECCCS--SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred ccCeEECCCCCEEEEEECcC--CceEEEEEECCCCCEEEecCC--CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 45678888777888876531 136899999987665554332 3778899999999888876544 38999999998
Q ss_pred CeEEEE
Q psy959 101 NREALY 106 (109)
Q Consensus 101 ~~~~l~ 106 (109)
..+.|.
T Consensus 389 ~~~~l~ 394 (415)
T 2hqs_A 389 FKARLP 394 (415)
T ss_dssp CEEECC
T ss_pred cEEEee
Confidence 877664
No 115
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.53 E-value=0.3 Score=32.59 Aligned_cols=76 Identities=13% Similarity=-0.040 Sum_probs=52.8
Q ss_pred CcceEEeeCCCCeEEEEecCC----CC---CCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEE
Q psy959 22 GRRHFMPPIRLRTLYYTDWGR----FG---TAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIER 94 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~----~~---~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~ 94 (109)
.|.+++++|..++||+++... .. ....|...++++......+.. -..|.++++++..++||.++ +.|..
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~---~~i~~ 158 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG---RDLHV 158 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES---SSEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC---CeEEE
Confidence 788999999777999986210 00 037899988865443333332 45789999999999999994 56777
Q ss_pred EeCCCCC
Q psy959 95 SDLAGNN 101 (109)
Q Consensus 95 ~~~dG~~ 101 (109)
.+.++..
T Consensus 159 ~d~~~~~ 165 (337)
T 1pby_B 159 MDPEAGT 165 (337)
T ss_dssp EETTTTE
T ss_pred EECCCCc
Confidence 7776543
No 116
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.51 E-value=0.39 Score=33.67 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=47.4
Q ss_pred eEEeeCCCCeEEEEec-C-C----CCCCCeEEEEEcCCCC-cEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 25 HFMPPIRLRTLYYTDW-G-R----FGTAGKILRTTMAGSL-KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 25 ~iavd~~~g~lywsd~-~-~----~~~~~~I~~~~~dG~~-~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
.+++++..+++|.+.. . . +.....|.+.++.... ...+ ... . |.+|++++..++||-+.. +.|...+.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i-~~~-~-p~~ia~spdg~~l~v~n~--~~v~v~D~ 332 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI-PGR-D-ALSMTIDQQRNLMLTLDG--GNVNVYDI 332 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE-ECT-T-CCEEEEETTTTEEEEECS--SCEEEEEC
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE-ecC-C-eeEEEECCCCCEEEEeCC--CeEEEEEC
Confidence 3899998899999864 1 0 0013478887775332 2333 222 2 999999999999998875 77777775
Q ss_pred CC
Q psy959 98 AG 99 (109)
Q Consensus 98 dG 99 (109)
..
T Consensus 333 ~t 334 (361)
T 2oiz_A 333 SQ 334 (361)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 117
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.50 E-value=0.52 Score=35.11 Aligned_cols=69 Identities=9% Similarity=-0.160 Sum_probs=50.6
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCC--cEEEEeCCCCCceeEEEec----CCCeEEEEeCCCCeEEE
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSL--KKVIIEKDLSQPSGLAIDF----DDEMLYWTDAVREKIER 94 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~--~~~l~~~~~~~p~glaiD~----~~~~lYw~D~~~~~I~~ 94 (109)
.|.+++++|..++||.++.. ..|...+++ .+. ...+- .-..|.++++++ ..++||.+....+.|..
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-----~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v 252 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-----ARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAI 252 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEE
T ss_pred ccceEEECCCCCEEEEECCC-----CeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEE
Confidence 38899999988899988763 789999984 222 22222 345799999999 89999998865566655
Q ss_pred EeC
Q psy959 95 SDL 97 (109)
Q Consensus 95 ~~~ 97 (109)
.+.
T Consensus 253 ~D~ 255 (543)
T 1nir_A 253 MDG 255 (543)
T ss_dssp EET
T ss_pred Eec
Confidence 554
No 118
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=95.50 E-value=0.3 Score=37.46 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=58.2
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCC-----------------CCCCeEEEEEcCCCC-------cEEEEeC---------
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRF-----------------GTAGKILRTTMAGSL-------KKVIIEK--------- 65 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~-----------------~~~~~I~~~~~dG~~-------~~~l~~~--------- 65 (109)
.+..|..++++|.+|.+|++=.... ...+.|++...++.. -..++..
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 3578999999999999999854321 024789999886532 1233321
Q ss_pred ------------CCCCceeEEEecCCCeEEE-EeCC-----------CCeEEEEeCCCCCeEEEE
Q psy959 66 ------------DLSQPSGLAIDFDDEMLYW-TDAV-----------REKIERSDLAGNNREALY 106 (109)
Q Consensus 66 ------------~~~~p~glaiD~~~~~lYw-~D~~-----------~~~I~~~~~dG~~~~~l~ 106 (109)
.+..|.+|++|+. +.||+ +|.. ...+.+.+-+....+.++
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl 525 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM 525 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE
T ss_pred cccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE
Confidence 2678999999965 78888 8864 236777777533344333
No 119
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.37 E-value=0.38 Score=32.73 Aligned_cols=69 Identities=12% Similarity=-0.019 Sum_probs=48.8
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
.|+++|. +.||.+.... ..+.|.+.++. |.-...+--..-....|++++ +++||-+.+..+++...+.+
T Consensus 24 qGL~~~~--~~LyestG~~--g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGET--GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp EEEEEET--TEEEEEECCT--TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETT
T ss_pred ccEEEEC--CEEEEECCCC--CCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECC
Confidence 5899986 8999997642 14789999985 544444432233344566666 79999999988888888764
No 120
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.37 E-value=0.38 Score=34.14 Aligned_cols=76 Identities=13% Similarity=-0.006 Sum_probs=52.9
Q ss_pred cce---EEeeCCCCeEEEEecCCC-----CCCCeEEEEEcCCCCc-EEEEeCCCCCceeEEEecCCC-eEEEEeCCCCeE
Q psy959 23 RRH---FMPPIRLRTLYYTDWGRF-----GTAGKILRTTMAGSLK-KVIIEKDLSQPSGLAIDFDDE-MLYWTDAVREKI 92 (109)
Q Consensus 23 p~~---iavd~~~g~lywsd~~~~-----~~~~~I~~~~~dG~~~-~~l~~~~~~~p~glaiD~~~~-~lYw~D~~~~~I 92 (109)
|.+ +++++..++||.+..... .....|.+.+...... ..|-. -..|.++++++..+ ++|-+....+.|
T Consensus 266 p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 266 PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred cCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 555 889998899999764210 0135788888764333 44422 23699999999988 788877777888
Q ss_pred EEEeCCCC
Q psy959 93 ERSDLAGN 100 (109)
Q Consensus 93 ~~~~~dG~ 100 (109)
...+....
T Consensus 344 ~ViD~~t~ 351 (373)
T 2mad_H 344 HIYDAGAG 351 (373)
T ss_pred EEEECCCC
Confidence 88887643
No 121
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.34 E-value=0.19 Score=34.10 Aligned_cols=76 Identities=9% Similarity=-0.020 Sum_probs=56.2
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC-CC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA-GN 100 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d-G~ 100 (109)
.|+++++++ .|.+++++.. .++|...+.+|...-.+-. -..|.+.+++ .++.++.++...++|...+.+ |+
T Consensus 126 ~~~~v~~~~-~G~~lv~~~~----~~~v~~~d~~G~~~w~~~~--~~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 126 QFRQINKNK-KGNYLVPLFA----TSEVREIAPNGQLLNSVKL--SGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp SCSCCEECT-TSCEEEEETT----TTEEEEECTTSCEEEEEEC--SSCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCC
T ss_pred cccCceECC-CCCEEEEecC----CCEEEEECCCCCEEEEEEC--CCCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCc
Confidence 467788887 7888888876 6899999988776555433 2478888876 456777888877889998888 77
Q ss_pred CeEEE
Q psy959 101 NREAL 105 (109)
Q Consensus 101 ~~~~l 105 (109)
-.-.+
T Consensus 198 ~~w~~ 202 (276)
T 3no2_A 198 IVRRV 202 (276)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55443
No 122
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.31 E-value=0.28 Score=35.54 Aligned_cols=78 Identities=12% Similarity=-0.115 Sum_probs=52.3
Q ss_pred CCcceEEeeCCCCeEEEEecCC----CC-CCCeEEEEEcCCC-CcEEEEeCC------CCCceeEEEecCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGR----FG-TAGKILRTTMAGS-LKKVIIEKD------LSQPSGLAIDFDDEMLYWTDAV 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~----~~-~~~~I~~~~~dG~-~~~~l~~~~------~~~p~glaiD~~~~~lYw~D~~ 88 (109)
..|. +++.|..+++|.++... ++ ....|.+.+.... ....|.... ...|.++++++..++||.+...
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~ 157 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 157 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC
Confidence 4574 99999888999998520 00 0245777776533 233443221 2479999999999999999864
Q ss_pred -CCeEEEEeCCC
Q psy959 89 -REKIERSDLAG 99 (109)
Q Consensus 89 -~~~I~~~~~dG 99 (109)
...|...+..-
T Consensus 158 ~~~~VsVID~~t 169 (386)
T 3sjl_D 158 PAPAVGVVDLEG 169 (386)
T ss_dssp SSCEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 56777776653
No 123
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.25 E-value=0.34 Score=31.42 Aligned_cols=87 Identities=14% Similarity=0.035 Sum_probs=59.4
Q ss_pred cEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCC-CCcEEEEeCC-CCCceeEEEecCCCeEEEEeCC--
Q psy959 13 RSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAG-SLKKVIIEKD-LSQPSGLAIDFDDEMLYWTDAV-- 88 (109)
Q Consensus 13 ~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG-~~~~~l~~~~-~~~p~glaiD~~~~~lYw~D~~-- 88 (109)
.+.+...-..+.++++.|...+|+++. ...|...++++ .....+.... ...+..+++.+....|+++...
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 107 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF 107 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC
Confidence 333443345567899999666677654 36899999987 6555444322 2456779999999999998743
Q ss_pred -CCeEEEEeCCCCCeEEE
Q psy959 89 -REKIERSDLAGNNREAL 105 (109)
Q Consensus 89 -~~~I~~~~~dG~~~~~l 105 (109)
...|...+.++...+.+
T Consensus 108 ~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 108 GKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp SSCEEEEEETTCCCCEEC
T ss_pred CcceEEEEECCCCceEEe
Confidence 57888888877655443
No 124
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.16 E-value=0.29 Score=33.90 Aligned_cols=66 Identities=12% Similarity=0.013 Sum_probs=48.7
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
.||.++ .+.||.+... ...|.+.++. |.-...+ ...-....|++++ +++||.+.+..+.+...+.+
T Consensus 58 qGL~~~--~~~Ly~stG~----~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGH----QGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp EEEEEE--TTEEEEEETT----TTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETT
T ss_pred ceEEEE--CCEEEEEcCC----CCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECC
Confidence 588888 5899999876 5678888885 6666655 3333334567765 78999999988888887764
No 125
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.15 E-value=0.4 Score=32.47 Aligned_cols=74 Identities=9% Similarity=-0.095 Sum_probs=53.5
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeC-----CCCCceeEEEecCCCeEEEEeC-C-----
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEK-----DLSQPSGLAIDFDDEMLYWTDA-V----- 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~-----~~~~p~glaiD~~~~~lYw~D~-~----- 88 (109)
..|.++++.+ +|.++.++.. ..+|...+.+ |...-.+-.. .+..|.++++.+ ++.+|.++. +
T Consensus 165 ~~~~~~~~~~-~g~~~v~~~~----~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~~~g~~~~~ 238 (276)
T 3no2_A 165 GTPFSSAFLD-NGDCLVACGD----AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ-NGGLYICNWQGHDREA 238 (276)
T ss_dssp SCCCEEEECT-TSCEEEECBT----TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT-TSCEEEEEECTTCTTG
T ss_pred CCccceeEcC-CCCEEEEeCC----CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC-CCCEEEEeccCccccc
Confidence 4688888887 7888888876 5789998887 8776665432 245689999874 778999985 2
Q ss_pred ----CCeEEEEeCCCC
Q psy959 89 ----REKIERSDLAGN 100 (109)
Q Consensus 89 ----~~~I~~~~~dG~ 100 (109)
..++..++-+|+
T Consensus 239 ~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 239 GKGKHPQLVEIDSEGK 254 (276)
T ss_dssp GGSCCCSEEEECTTSB
T ss_pred cccCCceEEEECCCCC
Confidence 235666666665
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.01 E-value=0.57 Score=34.91 Aligned_cols=74 Identities=9% Similarity=-0.066 Sum_probs=54.0
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
.|.++++.+..+.+|.+... ..+|...+.. +....+.....-..|.++++++..+++|.+....+.|...+...
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKE----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp CEEEEEECSSSSEEEEEETT----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEECC----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 45678888877888888766 6899999885 33333111123467999999999999999988777888877653
No 127
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.01 E-value=0.12 Score=37.85 Aligned_cols=72 Identities=14% Similarity=0.033 Sum_probs=52.1
Q ss_pred EEeeCCCCeEEEEecCCC-----CCCCeEEEEEcCCC-CcEEEEeCCCCCceeEEEecCCC-eEEEEeCCCCeEEEEeCC
Q psy959 26 FMPPIRLRTLYYTDWGRF-----GTAGKILRTTMAGS-LKKVIIEKDLSQPSGLAIDFDDE-MLYWTDAVREKIERSDLA 98 (109)
Q Consensus 26 iavd~~~g~lywsd~~~~-----~~~~~I~~~~~dG~-~~~~l~~~~~~~p~glaiD~~~~-~lYw~D~~~~~I~~~~~d 98 (109)
+++++..+++|.++.... .....|.+.+.... ....|-.. ..|.+|++++..+ +||-+.+..+.|...+..
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 899998899999975310 01247888887533 33344222 2699999999998 999999888888888865
Q ss_pred C
Q psy959 99 G 99 (109)
Q Consensus 99 G 99 (109)
-
T Consensus 402 t 402 (426)
T 3c75_H 402 T 402 (426)
T ss_dssp T
T ss_pred C
Confidence 3
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.95 E-value=0.43 Score=30.94 Aligned_cols=84 Identities=14% Similarity=0.069 Sum_probs=55.8
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCC----------C
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV----------R 89 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~----------~ 89 (109)
-..+.+++..|....|+++.... ....|...+.++.....+.. ....+..+++++..+.|+++... .
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRT--GQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred CCccccceECCCCCEEEEEecCC--CCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 34567889999666787775321 15678887777766554432 22345678888888888887653 2
Q ss_pred CeEEEEeCCCCCeEEEE
Q psy959 90 EKIERSDLAGNNREALY 106 (109)
Q Consensus 90 ~~I~~~~~dG~~~~~l~ 106 (109)
..|...++++...+.+.
T Consensus 249 ~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEEETTSCSCEEEE
T ss_pred eEEEEEecCCCCceeee
Confidence 56888898876655443
No 129
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.61 E-value=0.4 Score=35.69 Aligned_cols=73 Identities=16% Similarity=0.118 Sum_probs=53.5
Q ss_pred CcceEEe--eCCCCeEEEEec-----CCCCCCCeEEEEEcCCCC---cEEE-EeC-----C-----------CCCceeEE
Q psy959 22 GRRHFMP--PIRLRTLYYTDW-----GRFGTAGKILRTTMAGSL---KKVI-IEK-----D-----------LSQPSGLA 74 (109)
Q Consensus 22 ~p~~iav--d~~~g~lywsd~-----~~~~~~~~I~~~~~dG~~---~~~l-~~~-----~-----------~~~p~gla 74 (109)
.|+.|++ +|...++|.+.. . .+.|.+...|+.. .+++ +.. . -..|.+|.
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~L----ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDL----SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTC----CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCC----CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 5777766 998889999886 4 5788877776421 1122 111 0 14689999
Q ss_pred EecCCCeEEEEeCCCCeEEEEeCC
Q psy959 75 IDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 75 iD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
+.+..++||.+.++.+.|...+.+
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECS
T ss_pred ECCCCCEEEEEeCCCCEEEEEEec
Confidence 999999999999999999998874
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.35 E-value=0.94 Score=32.22 Aligned_cols=96 Identities=11% Similarity=0.012 Sum_probs=65.3
Q ss_pred CCCCCccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEe
Q psy959 7 DLLKTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTD 86 (109)
Q Consensus 7 ~l~G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D 86 (109)
+++|...+.+...-....+++..|...+|+++.... ....|...++++...+.+.. .-..+..+++.|.+.+|+++-
T Consensus 165 d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~~l~~-~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 165 DYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQVAS-FPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp ETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEEEEC-CSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEEEeec-CCCcccCEEEcCCCCEEEEEE
Confidence 455655555554445667889999777888876531 14689999997665555443 234677899999998888776
Q ss_pred CC--CCeEEEEeCCCCCeEEE
Q psy959 87 AV--REKIERSDLAGNNREAL 105 (109)
Q Consensus 87 ~~--~~~I~~~~~dG~~~~~l 105 (109)
.. ...|...++++...+.+
T Consensus 242 ~~~g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp CTTSSCEEEEEETTTCCEEEC
T ss_pred ecCCCceEEEEECCCCCEEeC
Confidence 43 45688888876655443
No 131
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=93.87 E-value=0.81 Score=30.93 Aligned_cols=80 Identities=10% Similarity=-0.034 Sum_probs=52.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCC------------
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV------------ 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~------------ 88 (109)
....+++..|...+|+++..........|...++++...+.+..... +.+++..|.+++|+++...
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 34556788886677887754310013568898988766555554322 7788888888888887521
Q ss_pred --------------CCeEEEEeCCCCCe
Q psy959 89 --------------REKIERSDLAGNNR 102 (109)
Q Consensus 89 --------------~~~I~~~~~dG~~~ 102 (109)
...|...++++...
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEE
T ss_pred cceeecCcccccCccceEEEEECCCCeE
Confidence 35688888876654
No 132
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.77 E-value=0.95 Score=30.97 Aligned_cols=85 Identities=12% Similarity=-0.027 Sum_probs=52.3
Q ss_pred CCcceEEeeC-CCCeEEEEecCCC-CCCCeEEEEEcCCCCcEEEEeCC-CCCceeEEEecCCCeEEEEeC--CCCe--EE
Q psy959 21 PGRRHFMPPI-RLRTLYYTDWGRF-GTAGKILRTTMAGSLKKVIIEKD-LSQPSGLAIDFDDEMLYWTDA--VREK--IE 93 (109)
Q Consensus 21 ~~p~~iavd~-~~g~lywsd~~~~-~~~~~I~~~~~dG~~~~~l~~~~-~~~p~glaiD~~~~~lYw~D~--~~~~--I~ 93 (109)
.....++..| ..+.|+++..... ....+|...+.+|...+.+.... ...+..+++.+..++|+++.. +... |.
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 3455677777 4555777643310 00158999999887765554321 224566788888888887743 3334 88
Q ss_pred EEeCCCCCeEEE
Q psy959 94 RSDLAGNNREAL 105 (109)
Q Consensus 94 ~~~~dG~~~~~l 105 (109)
..++++...+.+
T Consensus 268 ~~d~~~g~~~~l 279 (396)
T 3c5m_A 268 KANPETLENEEV 279 (396)
T ss_dssp EECTTTCCEEEE
T ss_pred EEECCCCCeEEe
Confidence 888876655444
No 133
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.64 E-value=1.2 Score=30.73 Aligned_cols=69 Identities=9% Similarity=-0.096 Sum_probs=48.5
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
.||.++ .+.||.+.... ..+.|.+.+++ |.-...+....-....||+++ +++||.+.+..+.+...+.+
T Consensus 46 qGL~~~--~~~LyestG~~--g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLN--GRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp EEEEEE--TTEEEEEEEET--TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETT
T ss_pred ceEEEE--CCEEEEECCCC--CCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECc
Confidence 789988 57999998642 13588888885 554444433322234667776 88999999988888888765
No 134
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.45 E-value=0.71 Score=34.41 Aligned_cols=93 Identities=11% Similarity=-0.017 Sum_probs=56.3
Q ss_pred ccEEEe-cCCCCcceEEeeCCCCeEEEEecCCCC---CCCeEEEEEcCCC----CcEEEEeCCCCCceeEEEecCCCeEE
Q psy959 12 HRSLLL-QAIPGRRHFMPPIRLRTLYYTDWGRFG---TAGKILRTTMAGS----LKKVIIEKDLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 12 ~~~~li-~~l~~p~~iavd~~~g~lywsd~~~~~---~~~~I~~~~~dG~----~~~~l~~~~~~~p~glaiD~~~~~lY 83 (109)
..+.+. ..-....++++.|...+|+|+...... ....|...+++++ ..+.+....-..+..++..+.++ +|
T Consensus 178 ~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~ 256 (662)
T 3azo_A 178 AVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LI 256 (662)
T ss_dssp GSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EE
T ss_pred ceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EE
Confidence 334443 333345567888977789988754210 1258999999842 34444433235677788887777 66
Q ss_pred EEeCCC--CeEEEEeCCCCCeEEE
Q psy959 84 WTDAVR--EKIERSDLAGNNREAL 105 (109)
Q Consensus 84 w~D~~~--~~I~~~~~dG~~~~~l 105 (109)
++.... .+|...+.++...+.+
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~l 280 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPATGAATQL 280 (662)
T ss_dssp EEECTTSSCEEEEECTTTCCEEES
T ss_pred EEECCCCCeEEEEEECCCCceeec
Confidence 554433 3898888866554443
No 135
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.30 E-value=0.52 Score=32.40 Aligned_cols=82 Identities=9% Similarity=-0.089 Sum_probs=46.0
Q ss_pred eEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCC-----CCceeEEEecCCCeEEEEe--------CCCCe
Q psy959 25 HFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDL-----SQPSGLAIDFDDEMLYWTD--------AVREK 91 (109)
Q Consensus 25 ~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~-----~~p~glaiD~~~~~lYw~D--------~~~~~ 91 (109)
..+..|....|+|...........|++.++++...+.+..... ..|.++++.+..+.|+++- .+...
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 321 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPF 321 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCE
Confidence 4677776666755443211011249999998766655544221 1245556666677777653 44567
Q ss_pred EEEEeCCCCCeEEEE
Q psy959 92 IERSDLAGNNREALY 106 (109)
Q Consensus 92 I~~~~~dG~~~~~l~ 106 (109)
|...++++...+.+.
T Consensus 322 i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 322 LYVFNMKNGTQHRVA 336 (388)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEeccCCceEEec
Confidence 888888876665554
No 136
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=93.12 E-value=1.5 Score=31.64 Aligned_cols=72 Identities=10% Similarity=0.022 Sum_probs=50.4
Q ss_pred eEEeeCCCCeEEEEecCC-----CCCCCeEEEEEcCCCC-cEEEEeCCCCCceeEEEecCCC-eEEEEeCCCCeEEEEeC
Q psy959 25 HFMPPIRLRTLYYTDWGR-----FGTAGKILRTTMAGSL-KKVIIEKDLSQPSGLAIDFDDE-MLYWTDAVREKIERSDL 97 (109)
Q Consensus 25 ~iavd~~~g~lywsd~~~-----~~~~~~I~~~~~dG~~-~~~l~~~~~~~p~glaiD~~~~-~lYw~D~~~~~I~~~~~ 97 (109)
.+++++..++||.+.... ++...+|.+.++.... .+.+... ..|.+|++++..+ +||-+....+.|...+.
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 389999999999986411 1113578888875333 3333322 3788999999986 78988988888887775
Q ss_pred C
Q psy959 98 A 98 (109)
Q Consensus 98 d 98 (109)
.
T Consensus 362 ~ 362 (386)
T 3sjl_D 362 E 362 (386)
T ss_dssp T
T ss_pred C
Confidence 4
No 137
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.80 E-value=1.6 Score=29.92 Aligned_cols=99 Identities=13% Similarity=0.007 Sum_probs=60.8
Q ss_pred CCCCCccEEEecCCCCcceEEeeC-CCCeEEEEecCCC-CCCCeEEEEEcCCCCcEEEEeCCC-CCceeEEEecCCCeEE
Q psy959 7 DLLKTHRSLLLQAIPGRRHFMPPI-RLRTLYYTDWGRF-GTAGKILRTTMAGSLKKVIIEKDL-SQPSGLAIDFDDEMLY 83 (109)
Q Consensus 7 ~l~G~~~~~li~~l~~p~~iavd~-~~g~lywsd~~~~-~~~~~I~~~~~dG~~~~~l~~~~~-~~p~glaiD~~~~~lY 83 (109)
++.+...+.+...-....++++.| ..+.|.++..... .....|...+.+|...+.+..... ......+..+..++|+
T Consensus 174 d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 174 DLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp ETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEE
T ss_pred ECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEE
Confidence 344444444444334456788888 6667766654311 114689999999887776654221 1244567888888886
Q ss_pred EEeC--CCC--eEEEEeCCCCCeEEE
Q psy959 84 WTDA--VRE--KIERSDLAGNNREAL 105 (109)
Q Consensus 84 w~D~--~~~--~I~~~~~dG~~~~~l 105 (109)
++.. +.. .|...++++...+.+
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred EEecCCCCCcceEEEEecCCCceEEE
Confidence 6543 222 499999987776555
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.49 E-value=1.7 Score=31.92 Aligned_cols=78 Identities=10% Similarity=-0.012 Sum_probs=55.0
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCC-CCeEEEEeCCCCCe
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV-REKIERSDLAGNNR 102 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~-~~~I~~~~~dG~~~ 102 (109)
.+++++|....|+++..... ....|++.++++...+.+. ........++..|.++.||.++.. ...|...++++...
T Consensus 153 ~~~~~spDG~~la~~~~~~~-~~~~i~~~d~~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGG-GRVSLFTSNLSSGGLRVFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp CEEEEEEETTEEEEEEEEET-TEEEEEEEETTTCCCEEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred ceEEECCCCCEEEEEEEcCC-CCeEEEEEcCCCCCceEee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 67888887778876643211 1267999998876666653 333456788999999999955543 24899999998776
Q ss_pred E
Q psy959 103 E 103 (109)
Q Consensus 103 ~ 103 (109)
+
T Consensus 231 ~ 231 (582)
T 3o4h_A 231 E 231 (582)
T ss_dssp E
T ss_pred E
Confidence 6
No 139
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.47 E-value=2.4 Score=32.50 Aligned_cols=68 Identities=9% Similarity=0.038 Sum_probs=44.9
Q ss_pred CCCcceEEe-e-CCCCeEEEEecCCC-------------CCCCeEEEEEcCCCCcEEEEeCCC-CCceeEEEecCCCeEE
Q psy959 20 IPGRRHFMP-P-IRLRTLYYTDWGRF-------------GTAGKILRTTMAGSLKKVIIEKDL-SQPSGLAIDFDDEMLY 83 (109)
Q Consensus 20 l~~p~~iav-d-~~~g~lywsd~~~~-------------~~~~~I~~~~~dG~~~~~l~~~~~-~~p~glaiD~~~~~lY 83 (109)
-..|.++++ . |.++++|.+....- .....+.+.+.+ ..+++.+-.+ .+|.++++++..+++|
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~--t~~v~~qI~Vgg~pd~~~~spdGk~~~ 210 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD--KWEVAWQVLVSGNLDNCDADYEGKWAF 210 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT--TTEEEEEEEESSCCCCEEECSSSSEEE
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECC--CCeEEEEEEeCCCccceEECCCCCEEE
Confidence 467999998 4 88999998852210 002345554444 4444433111 3899999999999999
Q ss_pred EEeCCC
Q psy959 84 WTDAVR 89 (109)
Q Consensus 84 w~D~~~ 89 (109)
.+....
T Consensus 211 vt~~~s 216 (595)
T 1fwx_A 211 STSYNS 216 (595)
T ss_dssp EEESCT
T ss_pred EEecCc
Confidence 998754
No 140
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.45 E-value=0.85 Score=32.61 Aligned_cols=76 Identities=9% Similarity=-0.032 Sum_probs=49.0
Q ss_pred Ccce---EEeeCCCCeEEEEec---CCC-CCCCeEEEEEcCCCC-cEEEEeCCCCCceeEEEecCCCeEEEEeC-CCCeE
Q psy959 22 GRRH---FMPPIRLRTLYYTDW---GRF-GTAGKILRTTMAGSL-KKVIIEKDLSQPSGLAIDFDDEMLYWTDA-VREKI 92 (109)
Q Consensus 22 ~p~~---iavd~~~g~lywsd~---~~~-~~~~~I~~~~~dG~~-~~~l~~~~~~~p~glaiD~~~~~lYw~D~-~~~~I 92 (109)
.|.+ +++++..+++|.+.. +.. .......+.++.... ...|-. -..|.+|++++..+++|.+.. ..+.|
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--g~~p~gi~~s~Dg~~l~va~~~~~~~V 339 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--GHDSDAIIAAQDGASDNYANSAGTEVL 339 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--EEEECEEEECCSSSCEEEEEETTTTEE
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--CCCcceEEECCCCCEEEEEccCCCCeE
Confidence 3555 899998899999864 200 000233466654322 222221 126999999999888999888 68889
Q ss_pred EEEeCCC
Q psy959 93 ERSDLAG 99 (109)
Q Consensus 93 ~~~~~dG 99 (109)
...++.-
T Consensus 340 sVID~~t 346 (368)
T 1mda_H 340 DIYDAAS 346 (368)
T ss_dssp EEEESSS
T ss_pred EEEECCC
Confidence 8888753
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.23 E-value=3.7 Score=32.72 Aligned_cols=77 Identities=9% Similarity=0.006 Sum_probs=54.3
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCC---------CCe
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV---------REK 91 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~---------~~~ 91 (109)
..+.++++.|....|+++.. ...|...++++.....+..........+++.|..+.|.++... ...
T Consensus 379 ~~~~~~~~SpDG~~la~~~~-----~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVAND-----RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred cceeeeEECCCCCEEEEECC-----CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCe
Confidence 45678899997677777654 3689999997666555554444455788999989888887542 247
Q ss_pred EEEEeCCCCCe
Q psy959 92 IERSDLAGNNR 102 (109)
Q Consensus 92 I~~~~~dG~~~ 102 (109)
|...++++...
T Consensus 454 i~l~d~~~g~~ 464 (1045)
T 1k32_A 454 IHVYDMEGRKI 464 (1045)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCcE
Confidence 88888776543
No 142
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=90.89 E-value=0.95 Score=34.74 Aligned_cols=74 Identities=9% Similarity=-0.044 Sum_probs=57.0
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC---------c-EEEEe-CCCCCceeEEEecCCCeEEEEeCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL---------K-KVIIE-KDLSQPSGLAIDFDDEMLYWTDAVR 89 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~---------~-~~l~~-~~~~~p~glaiD~~~~~lYw~D~~~ 89 (109)
..|.|+++.|...++|.++.. ..++.+.+.+... + .++.. .--..|..+++|+.. ++|-+-...
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~----s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ld 351 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKL----SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLD 351 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTT----SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEeCCC----CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecC
Confidence 689999999988899999987 6899998887321 1 12222 223579999999887 999999888
Q ss_pred CeEEEEeCCC
Q psy959 90 EKIERSDLAG 99 (109)
Q Consensus 90 ~~I~~~~~dG 99 (109)
..|...+++.
T Consensus 352 sqV~kwdi~~ 361 (595)
T 1fwx_A 352 SQVVKWNIED 361 (595)
T ss_dssp TEEEEEEHHH
T ss_pred CcEEEEEhhH
Confidence 8888887764
No 143
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.61 E-value=2.9 Score=28.49 Aligned_cols=82 Identities=10% Similarity=0.048 Sum_probs=53.4
Q ss_pred cceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCCCe
Q psy959 23 RRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGNNR 102 (109)
Q Consensus 23 p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~~~ 102 (109)
+.++++.|...+|+|+.... ....|...++++...+.+.........+++..+.+++|+++.... .|...++++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~--g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFD--GNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL-NLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTT--SSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT-EEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecC--CCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC-cEEEEECCCCCc
Confidence 56778888677777764321 146788888887655444332211122367788888998887643 799999988776
Q ss_pred EEEEe
Q psy959 103 EALYL 107 (109)
Q Consensus 103 ~~l~~ 107 (109)
+.+..
T Consensus 115 ~~~~~ 119 (396)
T 3c5m_A 115 QVIYT 119 (396)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66554
No 144
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=89.56 E-value=4.1 Score=30.24 Aligned_cols=82 Identities=6% Similarity=-0.193 Sum_probs=44.9
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCC--C------ceeEEEecCCCeEEEEeCCCCe
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLS--Q------PSGLAIDFDDEMLYWTDAVREK 91 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~--~------p~glaiD~~~~~lYw~D~~~~~ 91 (109)
-..+.+++..| .|.+|++.... ...+|++.++++...+.+...... . ...+++.+....+|-...+..+
T Consensus 241 ~~~~~~~~~sp-dg~l~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (662)
T 3azo_A 241 EEAIAQAEWAP-DGSLIVATDRT--GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAV 317 (662)
T ss_dssp TBCEEEEEECT-TSCEEEEECTT--SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCE
T ss_pred CceEcceEECC-CCeEEEEECCC--CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccE
Confidence 35566778777 45577665431 134888888865554444332111 1 2456665444444433334557
Q ss_pred EEEEeCCCCCeEE
Q psy959 92 IERSDLAGNNREA 104 (109)
Q Consensus 92 I~~~~~dG~~~~~ 104 (109)
|..++.+|...+.
T Consensus 318 l~~~d~~~~~~~~ 330 (662)
T 3azo_A 318 LGILDPESGELVD 330 (662)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCcEEE
Confidence 7777777655443
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.15 E-value=3.6 Score=30.95 Aligned_cols=77 Identities=5% Similarity=-0.032 Sum_probs=53.4
Q ss_pred CcceEEeeCCCCeEEEEecCCC-CCCCeEEEEEcCCCCcEEEEeCCCC------------------------CceeEEEe
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRF-GTAGKILRTTMAGSLKKVIIEKDLS------------------------QPSGLAID 76 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~-~~~~~I~~~~~dG~~~~~l~~~~~~------------------------~p~glaiD 76 (109)
.+.++++.|...+|+++..... .....|...++++...+.+...... .+..+++.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4678999996777888765210 0013899999987665555542211 14678999
Q ss_pred cCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 77 FDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 77 ~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
+..++|+.+.. ..|...++++.
T Consensus 118 pDg~~l~~~~~--~~i~~~d~~~~ 139 (741)
T 2ecf_A 118 PDAQRLLFPLG--GELYLYDLKQE 139 (741)
T ss_dssp TTSSEEEEEET--TEEEEEESSSC
T ss_pred CCCCEEEEEeC--CcEEEEECCCC
Confidence 99999888876 78888888776
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.94 E-value=3 Score=31.23 Aligned_cols=77 Identities=9% Similarity=0.100 Sum_probs=47.6
Q ss_pred ceEEeeC--CCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCcee-EEEecCCCeEEEEeCCC----CeEEEEe
Q psy959 24 RHFMPPI--RLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSG-LAIDFDDEMLYWTDAVR----EKIERSD 96 (109)
Q Consensus 24 ~~iavd~--~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~g-laiD~~~~~lYw~D~~~----~~I~~~~ 96 (109)
.+++..| ....+|.++.. ...+|...+.+|...+.+.. ....... +++++.++.||.+.... ..|...+
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~---g~~~l~~~~~~~~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRD---GWNHLYLYDTTGRLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp SCCEECTTCSSEEEEEECTT---SSCEEEEEETTSCEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred CCceeecCCCCEEEEEEccC---CccEEEEEECCCCEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 4567766 44444434322 25678888777765555532 2222334 78999999999987654 3888888
Q ss_pred CCCCCeEE
Q psy959 97 LAGNNREA 104 (109)
Q Consensus 97 ~dG~~~~~ 104 (109)
.++...+.
T Consensus 389 ~~~~~~~~ 396 (706)
T 2z3z_A 389 IKGGKTKD 396 (706)
T ss_dssp TTCCCCEE
T ss_pred cCCCCcee
Confidence 87755443
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=86.56 E-value=1.7 Score=31.96 Aligned_cols=86 Identities=6% Similarity=-0.163 Sum_probs=50.0
Q ss_pred CCCCCccEEEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEE--------EecC
Q psy959 7 DLLKTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLA--------IDFD 78 (109)
Q Consensus 7 ~l~G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~gla--------iD~~ 78 (109)
++++...+.|...-....+++..|....|+.++.. ....|++.++++...+ ++...-..+.+++ +++.
T Consensus 181 d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~---~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spd 256 (582)
T 3o4h_A 181 NLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETA---REARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPD 256 (582)
T ss_dssp ETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECS---SCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTT
T ss_pred cCCCCCceEeecCCCccccceECCCCCEEEEccCC---CeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCC
Confidence 34444444444333445778888866677744432 1348999999877766 4433223344455 7777
Q ss_pred CCeEEEEeCCCCeEEEEeC
Q psy959 79 DEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 79 ~~~lYw~D~~~~~I~~~~~ 97 (109)
+ ++|.+-...+.+....+
T Consensus 257 g-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 257 G-RLAVVARREGRSAVFID 274 (582)
T ss_dssp S-CEEEEEEETTEEEEEET
T ss_pred C-cEEEEEEcCCcEEEEEE
Confidence 7 66666554445544444
No 148
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=85.98 E-value=4.9 Score=26.94 Aligned_cols=80 Identities=11% Similarity=0.022 Sum_probs=51.8
Q ss_pred CCCcceEEeeCCCCeEEEEecCC----CCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCC----CCe
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGR----FGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV----REK 91 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~----~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~----~~~ 91 (109)
+..+.+.++| ..+++|+-... ......|...++++...+.+ ..+..+++.|.+++|+++... ...
T Consensus 14 ~~~~~~~~~d--G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 14 FAYLSDPRTK--GELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp SCEEEEEEEE--TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred eEEcccceEC--CcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 3445566673 56777763210 00146788889887765555 356778999999998887652 346
Q ss_pred EEEEeCCCCCeEEEE
Q psy959 92 IERSDLAGNNREALY 106 (109)
Q Consensus 92 I~~~~~dG~~~~~l~ 106 (109)
|...+++|...+.+.
T Consensus 87 l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 87 IWVADLETLSSKKIL 101 (347)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCceEEEE
Confidence 888888876655554
No 149
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=84.84 E-value=4.4 Score=30.93 Aligned_cols=77 Identities=9% Similarity=0.014 Sum_probs=49.5
Q ss_pred cceEEeeCCCCeEE-EEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCC------CCeEEEE
Q psy959 23 RRHFMPPIRLRTLY-YTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAV------REKIERS 95 (109)
Q Consensus 23 p~~iavd~~~g~ly-wsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~------~~~I~~~ 95 (109)
+.+.+.-|....++ |.... +....|+..+.+|...+.|.........-+..| ++.||++... ...|.++
T Consensus 321 ~~~p~fspDG~~l~~~~s~~--~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNE--EGYRHICYFQIDKKDCTFITKGTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp CCCCEECTTSSEEEEEEECT--TSCEEEEEEETTCSSCEESCCSSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEE
T ss_pred CCCceEcCCCCEEEEEEEcC--CCceEEEEEECCCCceEecccCCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEE
Confidence 34566667445555 55322 126889999999888776654332222223466 8899998764 3589999
Q ss_pred eCCCCCeE
Q psy959 96 DLAGNNRE 103 (109)
Q Consensus 96 ~~dG~~~~ 103 (109)
+++|...+
T Consensus 397 ~~~g~~~~ 404 (740)
T 4a5s_A 397 QLIDYTKV 404 (740)
T ss_dssp ETTEEEEE
T ss_pred ECCCCCcc
Confidence 99987655
No 150
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=84.39 E-value=7.2 Score=29.66 Aligned_cols=79 Identities=13% Similarity=0.066 Sum_probs=48.6
Q ss_pred EeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeC---CCCeEEEEeCCCCCeE
Q psy959 27 MPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA---VREKIERSDLAGNNRE 103 (109)
Q Consensus 27 avd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~---~~~~I~~~~~dG~~~~ 103 (109)
.+.+..++|+++.... ...+|...+++|...+.+.........++..++.++.|+.+-. ....|...++++...+
T Consensus 332 ~~s~~g~~lv~~~~~~--g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVD--ATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp EEEEETTEEEEEEEET--TEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred EEEEECCEEEEEEEEC--CeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 4555567777775431 1457888888887655543222223345555666777776643 2478999998876666
Q ss_pred EEEe
Q psy959 104 ALYL 107 (109)
Q Consensus 104 ~l~~ 107 (109)
.+.+
T Consensus 410 ~l~~ 413 (693)
T 3iuj_A 410 LYRA 413 (693)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6543
No 151
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=83.83 E-value=12 Score=28.42 Aligned_cols=77 Identities=8% Similarity=0.019 Sum_probs=46.8
Q ss_pred eeCCCCeEEEEecC--CCCCCCeEEEEEcCCCCcEEEEeCCC----CCceeEEEecCCCeEEEEeC--CCCeEEEEeCCC
Q psy959 28 PPIRLRTLYYTDWG--RFGTAGKILRTTMAGSLKKVIIEKDL----SQPSGLAIDFDDEMLYWTDA--VREKIERSDLAG 99 (109)
Q Consensus 28 vd~~~g~lywsd~~--~~~~~~~I~~~~~dG~~~~~l~~~~~----~~p~glaiD~~~~~lYw~D~--~~~~I~~~~~dG 99 (109)
.| .+.||++... .......|++++++|...+..++..+ .......+.+..+.+..+-. ....+...+.++
T Consensus 372 ~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~ 449 (740)
T 4a5s_A 372 LT--SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVN 449 (740)
T ss_dssp EC--SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTT
T ss_pred Ee--CCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCC
Confidence 55 7899998765 22235799999999876553333221 23455677777765443332 345777777765
Q ss_pred CCeEEEE
Q psy959 100 NNREALY 106 (109)
Q Consensus 100 ~~~~~l~ 106 (109)
.....++
T Consensus 450 ~~~~~~l 456 (740)
T 4a5s_A 450 DKGLRVL 456 (740)
T ss_dssp TEEEEEE
T ss_pred CcEEEEe
Confidence 5444443
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=81.96 E-value=14 Score=27.61 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=50.0
Q ss_pred EEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeC---CCCeEEEEeCCCCC
Q psy959 26 FMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA---VREKIERSDLAGNN 101 (109)
Q Consensus 26 iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~---~~~~I~~~~~dG~~ 101 (109)
++++|..+.||++..........|++.+.++...+.+.. ......+++.+..+.|..+-. ....|...+.++..
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTP--ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCC--SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccC--CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 688997778998876521112589999887665554432 334667888888887766533 23578888888765
No 153
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=81.69 E-value=11 Score=26.40 Aligned_cols=81 Identities=11% Similarity=0.052 Sum_probs=52.7
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe--CCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE--KDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~--~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
...+|+.+|..+.+.-+-.. .+.|..-+++......+.. ..-....+|++.|.++.++.+-...+.|...++.+
T Consensus 121 ~V~~l~~~P~~~~~lasGs~----dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSK----GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp CEEEEEECSSCTTCEEEEET----TSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CEEEEEEeCCCCCEEEEEeC----CCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 35678999877766655544 5788888887555444433 22346788999886665555555556777777777
Q ss_pred CCeEEEE
Q psy959 100 NNREALY 106 (109)
Q Consensus 100 ~~~~~l~ 106 (109)
...+++.
T Consensus 197 ~~~~~~~ 203 (435)
T 4e54_B 197 NILRVFA 203 (435)
T ss_dssp CEEEEEE
T ss_pred CceeEEe
Confidence 6555544
No 154
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=79.88 E-value=13 Score=26.04 Aligned_cols=73 Identities=8% Similarity=-0.012 Sum_probs=49.3
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCC-CC-cEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAG-SL-KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG-~~-~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
..+.+|+..|...+++.+-.. .+.|...++.. .. ...+ ......+..+++.+....++.+-...+.|...++.
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~----dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSA----DKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEET----TSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCeEEEEeCCCCCCEEEEEeC----CCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 456788999966677777665 57888888864 33 3333 33345678889988887777776655556555554
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=79.84 E-value=15 Score=27.49 Aligned_cols=77 Identities=17% Similarity=0.171 Sum_probs=45.6
Q ss_pred ceEEeeCCCCeEEEE-ecCCC--CCCCeEEEEE-cCCCC---cEEEEeCCCCCceeEEEecCCCeEEEEeC----CCCeE
Q psy959 24 RHFMPPIRLRTLYYT-DWGRF--GTAGKILRTT-MAGSL---KKVIIEKDLSQPSGLAIDFDDEMLYWTDA----VREKI 92 (109)
Q Consensus 24 ~~iavd~~~g~lyws-d~~~~--~~~~~I~~~~-~dG~~---~~~l~~~~~~~p~glaiD~~~~~lYw~D~----~~~~I 92 (109)
.+++..|....|++. ..... ....+|...+ .++.. .+.+..........+++++.++.||++.. ...+|
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 388 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQL 388 (723)
T ss_dssp CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEE
Confidence 467788866667775 33210 0023677777 45554 44443222222223689999999998754 34578
Q ss_pred EEEeCCCC
Q psy959 93 ERSDLAGN 100 (109)
Q Consensus 93 ~~~~~dG~ 100 (109)
..++.+|.
T Consensus 389 ~~~~~~~~ 396 (723)
T 1xfd_A 389 YSANTVGN 396 (723)
T ss_dssp EEECSSTT
T ss_pred EEEeCCCC
Confidence 88888775
No 156
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=77.28 E-value=22 Score=27.19 Aligned_cols=68 Identities=16% Similarity=0.181 Sum_probs=45.1
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCC-----------------CCCeEEEEEcCCCCc-------EEEEe----------
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFG-----------------TAGKILRTTMAGSLK-------KVIIE---------- 64 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~-----------------~~~~I~~~~~dG~~~-------~~l~~---------- 64 (109)
.+..|.+++++|.+|.+|++-..... ..+.|.+...++... ..++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 36789999999999999999653210 136788887654321 12221
Q ss_pred -----------CCCCCceeEEEecCCCeEEEEeC
Q psy959 65 -----------KDLSQPSGLAIDFDDEMLYWTDA 87 (109)
Q Consensus 65 -----------~~~~~p~glaiD~~~~~lYw~D~ 87 (109)
..+..|-+|++|+.. +||.+.-
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G-~LwI~eD 494 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAG-RLWILTD 494 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTC-CEEEEEC
T ss_pred ccccccccCCCCCccCCcceEECCCC-CEEEEec
Confidence 126689999999865 4666643
No 157
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=76.35 E-value=23 Score=26.96 Aligned_cols=73 Identities=16% Similarity=0.199 Sum_probs=44.3
Q ss_pred eCCCCeEEEEecCCCCCCCeEEEEEcCCC--CcEEEEeCCCCCceeEEEecCCCeEEEEeC--CCCeEEEEeCCCCCeEE
Q psy959 29 PIRLRTLYYTDWGRFGTAGKILRTTMAGS--LKKVIIEKDLSQPSGLAIDFDDEMLYWTDA--VREKIERSDLAGNNREA 104 (109)
Q Consensus 29 d~~~g~lywsd~~~~~~~~~I~~~~~dG~--~~~~l~~~~~~~p~glaiD~~~~~lYw~D~--~~~~I~~~~~dG~~~~~ 104 (109)
.+..+.||+.... .....+|.++++++. ..+.++...-....+++.+ ++.|+++-. +..+|...+++|...+.
T Consensus 324 ~~dg~~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 324 DGVGDQLWFVSGD-GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGA 400 (741)
T ss_dssp EEETTEEEEEECT-TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEE
T ss_pred eccCCEEEEEECC-CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceee
Confidence 4556777776432 123678999999863 4455554332234455554 777877754 35578888887765444
No 158
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=75.78 E-value=24 Score=26.78 Aligned_cols=74 Identities=12% Similarity=0.118 Sum_probs=47.2
Q ss_pred eeCCCCeEEEEecCCCCCCCeEEEEEcCCCCc---EEEEeCCCCCceeEEEecCCCeEEEEeC--CCCeEEEEeCCCCCe
Q psy959 28 PPIRLRTLYYTDWGRFGTAGKILRTTMAGSLK---KVIIEKDLSQPSGLAIDFDDEMLYWTDA--VREKIERSDLAGNNR 102 (109)
Q Consensus 28 vd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~---~~l~~~~~~~p~glaiD~~~~~lYw~D~--~~~~I~~~~~dG~~~ 102 (109)
+++..+.+|+.... .....+|.++++++... +.++...-... .+.+..+.|+++.. +..+|...+++|...
T Consensus 287 ~~~~g~~l~~~t~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~ 362 (693)
T 3iuj_A 287 VDNKGSTLYLLTNR-DAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRV 362 (693)
T ss_dssp EEEETTEEEEEECT-TCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEE
T ss_pred EeccCCEEEEEECC-CCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECCeeEEEEEECCCCee
Confidence 44556777776543 12358999999987554 56655332222 55566888888755 345788888888765
Q ss_pred EEE
Q psy959 103 EAL 105 (109)
Q Consensus 103 ~~l 105 (109)
+.+
T Consensus 363 ~~l 365 (693)
T 3iuj_A 363 REV 365 (693)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 159
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.64 E-value=22 Score=27.24 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=44.0
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCC--------CCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFG--------TAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~--------~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
.+..|-.|++|+ .|.|+.+.-+... .+..+.....+ |.-++.+....-....|+++.+..+.||..
T Consensus 474 ~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 474 MFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 367899999999 6777776433110 13445555554 444444444445678899999999999987
No 160
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=75.27 E-value=15 Score=29.22 Aligned_cols=97 Identities=13% Similarity=-0.052 Sum_probs=57.3
Q ss_pred CCCCCccEEEecCCCCcceEEeeCCCCeEEEEecCC-CCCCCeEEEEEcCCCCcEEEEeCCCCCc-------eeEEEecC
Q psy959 7 DLLKTHRSLLLQAIPGRRHFMPPIRLRTLYYTDWGR-FGTAGKILRTTMAGSLKKVIIEKDLSQP-------SGLAIDFD 78 (109)
Q Consensus 7 ~l~G~~~~~li~~l~~p~~iavd~~~g~lywsd~~~-~~~~~~I~~~~~dG~~~~~l~~~~~~~p-------~glaiD~~ 78 (109)
+++|...+.|...-....++++-|...+|.|+.... +.....|...+++|...+.+... -... .+++..+.
T Consensus 39 ~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~-~~~~~~~~~~~~~~~~SpD 117 (1045)
T 1k32_A 39 DLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYF-SGKSTGRRMFTDVAGFDPD 117 (1045)
T ss_dssp ETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCC-CEEEETTEECSEEEEECTT
T ss_pred ECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccC-CCcccccccccccccCCCC
Confidence 455555555544334456788888777788874320 00146889999887654444321 1122 57788887
Q ss_pred CCeEEEEeC-----CCCeEEEEeCCCCCeEE
Q psy959 79 DEMLYWTDA-----VREKIERSDLAGNNREA 104 (109)
Q Consensus 79 ~~~lYw~D~-----~~~~I~~~~~dG~~~~~ 104 (109)
++.+|.++. ....|...+++|...+.
T Consensus 118 g~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~ 148 (1045)
T 1k32_A 118 GNLIISTDAMQPFSSMTCLYRVENDGINFVP 148 (1045)
T ss_dssp CCEEEEECTTSSSTTCCEEEEEEGGGTEEEE
T ss_pred CEEEEEECCcCCCcccceEEEEECCCCCeEE
Confidence 774444443 23578888887765443
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=74.89 E-value=24 Score=26.43 Aligned_cols=77 Identities=13% Similarity=0.153 Sum_probs=49.6
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeE-EEecCCCeEEEEeCC----CCeEEEEeCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGL-AIDFDDEMLYWTDAV----REKIERSDLA 98 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~gl-aiD~~~~~lYw~D~~----~~~I~~~~~d 98 (109)
.+++..| .|.++|+.... ...+|...+.+|. .+.+.. .-.....+ ++++.+++||++... ..+|..++.+
T Consensus 340 ~~~~~sp-dg~~~~~~~~~--g~~~l~~~~~~~~-~~~l~~-~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 414 (741)
T 2ecf_A 340 NSLRFLD-DGSILWSSERT--GFQHLYRIDSKGK-AAALTH-GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ 414 (741)
T ss_dssp SCCEECT-TSCEEEEECTT--SSCEEEEECSSSC-EEESCC-SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT
T ss_pred CceEECC-CCeEEEEecCC--CccEEEEEcCCCC-eeeeee-cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC
Confidence 5678887 45566665432 2468888888777 444432 22334455 589999999887653 3468888888
Q ss_pred CCCeEEE
Q psy959 99 GNNREAL 105 (109)
Q Consensus 99 G~~~~~l 105 (109)
|...+.|
T Consensus 415 g~~~~~l 421 (741)
T 2ecf_A 415 GGQPQRL 421 (741)
T ss_dssp CCCCEEC
T ss_pred CCCeeec
Confidence 8755544
No 162
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=74.62 E-value=19 Score=25.18 Aligned_cols=74 Identities=9% Similarity=0.056 Sum_probs=53.1
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC----CcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS----LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSD 96 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~----~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~ 96 (109)
..+.+++..|..+.++.+... .+.|...++... ....+ ...-..++.|++.+....++.+-...+.|...+
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~----dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd 306 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVAD----DQKLMIWDTRNNNTSKPSHTV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWD 306 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEET----TSEEEEEETTCSCSSSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCEeeeEEeCCCCCEEEEEeC----CCeEEEEECCCCCCCcceeEe-ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEe
Confidence 345678889877888888776 588999888643 23333 333456888999988887777766667788777
Q ss_pred CCC
Q psy959 97 LAG 99 (109)
Q Consensus 97 ~dG 99 (109)
+..
T Consensus 307 ~~~ 309 (430)
T 2xyi_A 307 LRN 309 (430)
T ss_dssp TTC
T ss_pred CCC
Confidence 764
No 163
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=74.28 E-value=25 Score=26.38 Aligned_cols=71 Identities=13% Similarity=0.011 Sum_probs=45.3
Q ss_pred eEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-CCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 25 HFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-KDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 25 ~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
+|..-+.....|++. .. .++|...+........+.. ..-..|+++.+|+..+++|.+....++|...+..-
T Consensus 302 ~i~~s~~~~~~vv~~-~~---~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 302 AILASHYRPEFIVNV-KE---TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp EEEECSSSSEEEEEE-TT---TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEEcCCCCEEEEEe-cC---CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 454444333444443 32 5788888875432211111 23457889999999999999998888898888763
No 164
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=72.82 E-value=27 Score=26.04 Aligned_cols=83 Identities=5% Similarity=-0.058 Sum_probs=53.7
Q ss_pred CcceEEeeCCCCeEEEEecCCC----CCCCeEEEEEcCCCCcEEEEeCCC--CCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRF----GTAGKILRTTMAGSLKKVIIEKDL--SQPSGLAIDFDDEMLYWTDAVREKIERS 95 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~----~~~~~I~~~~~dG~~~~~l~~~~~--~~p~glaiD~~~~~lYw~D~~~~~I~~~ 95 (109)
.+.++++.|...+|.++..... +....|...++++...+.+..... ..+..+++.|.+++|.++.. ..|...
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEE
Confidence 3788999997777777643211 012688889987665544433211 13667888888888888765 578888
Q ss_pred eCCCCCeEEEE
Q psy959 96 DLAGNNREALY 106 (109)
Q Consensus 96 ~~dG~~~~~l~ 106 (109)
+.++...+.+.
T Consensus 140 ~~~~g~~~~~~ 150 (723)
T 1xfd_A 140 AHVGKQAIRVV 150 (723)
T ss_dssp SSSSSCCEEEE
T ss_pred ECCCCceEEEe
Confidence 88765554443
No 165
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=69.04 E-value=19 Score=27.43 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=46.4
Q ss_pred eEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeC---CCCeEEEEeCCCCC
Q psy959 25 HFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA---VREKIERSDLAGNN 101 (109)
Q Consensus 25 ~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~---~~~~I~~~~~dG~~ 101 (109)
+++.+ .+.++++-... ...+|...+++|...+.+.........+++.++..+.|+++-. ....|...++++..
T Consensus 368 ~~~~~--~~~lv~~~~~d--g~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 368 SVGIA--GNRLFASYIHD--AKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEE--BTEEEEEEEET--TEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEE--CCEEEEEEEEC--CEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 34444 67788776432 1467888888777544442222334566777777776765533 24688888887655
Q ss_pred eEEE
Q psy959 102 REAL 105 (109)
Q Consensus 102 ~~~l 105 (109)
.+++
T Consensus 444 ~~~l 447 (741)
T 1yr2_A 444 TTPW 447 (741)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 4443
No 166
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=68.54 E-value=28 Score=24.44 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=47.9
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC--C-CCcEEEEe-CCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA--G-SLKKVIIE-KDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d--G-~~~~~l~~-~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
...++++.|...+|+.+-.. .+.|...+++ . .....+.. ..-..+..+++++....|+.++. .+.|...++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~ 178 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADS----DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDI 178 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGG----GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEEECC----CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEec
Confidence 46789999966676677654 4778877776 3 33444432 22356789999988888887765 455666654
Q ss_pred C
Q psy959 98 A 98 (109)
Q Consensus 98 d 98 (109)
.
T Consensus 179 ~ 179 (450)
T 2vdu_B 179 N 179 (450)
T ss_dssp T
T ss_pred C
Confidence 3
No 167
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=66.60 E-value=32 Score=25.98 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=48.1
Q ss_pred CCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCC-C-----CCceeEEEecCCCeEEEEeC--CCC--eEEEEeCCC
Q psy959 30 IRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKD-L-----SQPSGLAIDFDDEMLYWTDA--VRE--KIERSDLAG 99 (109)
Q Consensus 30 ~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~-~-----~~p~glaiD~~~~~lYw~D~--~~~--~I~~~~~dG 99 (109)
|..+++||+-.......+.|++...++...++++..+ + ....++++.|.+++|.++-. +.. .|...++++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 5477888875432112458899888776667776432 1 12457888888888877644 232 888999887
Q ss_pred CCeE
Q psy959 100 NNRE 103 (109)
Q Consensus 100 ~~~~ 103 (109)
....
T Consensus 161 g~~~ 164 (710)
T 2xdw_A 161 AKEL 164 (710)
T ss_dssp TEEE
T ss_pred CCCC
Confidence 6544
No 168
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=66.44 E-value=33 Score=24.58 Aligned_cols=79 Identities=11% Similarity=0.042 Sum_probs=51.0
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
-....++++.|. +.+..+-.. ...|..-+.+|...+.+.. ....+..+++.+....|.-+.. .+.|...+.+|
T Consensus 467 ~~~v~~~~~spd-~~~las~~~----d~~i~iw~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~-dg~v~lwd~~~ 539 (577)
T 2ymu_A 467 SSSVRGVAFSPD-GQTIASASD----DKTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASASD-DKTVKLWNRNG 539 (577)
T ss_dssp SSCEEEEEECTT-SCEEEEEET----TSEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSSCEEEEET-TSEEEEECTTS
T ss_pred CCCEEEEEEcCC-CCEEEEEeC----CCEEEEEcCCCCEEEEEeC-CCCCEEEEEEcCCCCEEEEEEC-cCEEEEEeCCC
Confidence 345578899984 444444433 4788888888876666542 3456788999887777665543 45666667777
Q ss_pred CCeEEE
Q psy959 100 NNREAL 105 (109)
Q Consensus 100 ~~~~~l 105 (109)
...+++
T Consensus 540 ~~~~~~ 545 (577)
T 2ymu_A 540 QLLQTL 545 (577)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 655444
No 169
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=65.89 E-value=28 Score=23.48 Aligned_cols=73 Identities=4% Similarity=-0.154 Sum_probs=42.2
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC--------------------cEEEEeCCCC--CceeEEEecC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL--------------------KKVIIEKDLS--QPSGLAIDFD 78 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~--------------------~~~l~~~~~~--~p~glaiD~~ 78 (109)
..+.++++.|....| .+-.. .+.|...++.... ....+..... .+..+++.+.
T Consensus 331 ~~i~~~~~s~~~~~l-~~~~~----dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 331 VPIFAGRISQDGQKY-AVAFM----DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA 405 (425)
T ss_dssp CCEEEEEECTTSSEE-EEEET----TSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT
T ss_pred ccEEEEEEcCCCCEE-EEEEC----CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC
Confidence 455678888844444 44433 4678877775332 2222222222 6788888887
Q ss_pred CCeEEEEeCCCCeEEEEeCCC
Q psy959 79 DEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 79 ~~~lYw~D~~~~~I~~~~~dG 99 (109)
...|+-+.. .+.|...+++|
T Consensus 406 ~~~l~~~~~-dg~i~iw~~~g 425 (425)
T 1r5m_A 406 GNKISVAYS-LQEGSVVAIPG 425 (425)
T ss_dssp SSEEEEEES-SSCCEEEECCC
T ss_pred CceEEEEec-CceEEEEeecC
Confidence 777765543 34566666654
No 170
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=65.29 E-value=38 Score=25.54 Aligned_cols=73 Identities=10% Similarity=0.162 Sum_probs=48.7
Q ss_pred CCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCC-C-----CCceeEEEecCCCeEEEEeC--C--CCeEEEEeCCC
Q psy959 30 IRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKD-L-----SQPSGLAIDFDDEMLYWTDA--V--REKIERSDLAG 99 (109)
Q Consensus 30 ~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~-~-----~~p~glaiD~~~~~lYw~D~--~--~~~I~~~~~dG 99 (109)
|..+++|++-.......+.|++...+|...++|+..+ + ....++++.|..++|.++-. + ...|...++++
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 4467888876532112478899998887777776532 1 13567888888888776643 2 25788899887
Q ss_pred CCe
Q psy959 100 NNR 102 (109)
Q Consensus 100 ~~~ 102 (109)
...
T Consensus 157 g~~ 159 (695)
T 2bkl_A 157 GEW 159 (695)
T ss_dssp CCB
T ss_pred CCC
Confidence 653
No 171
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=64.50 E-value=30 Score=23.42 Aligned_cols=75 Identities=9% Similarity=-0.087 Sum_probs=45.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCC------CCCceeEEEecCCCeEEEEeCCCC---e
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKD------LSQPSGLAIDFDDEMLYWTDAVRE---K 91 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~------~~~p~glaiD~~~~~lYw~D~~~~---~ 91 (109)
....+++..|..+.++.+-.. .+.|...++........+... -..+..+++.+....++.+-...+ .
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGS----SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESS----SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCeeEEEeCCCCCcEEEEEcC----CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 345688999865677777654 578888888654433333322 356778899887654444433333 5
Q ss_pred EEEEeCCC
Q psy959 92 IERSDLAG 99 (109)
Q Consensus 92 I~~~~~dG 99 (109)
|...++..
T Consensus 242 i~~~d~~~ 249 (416)
T 2pm9_A 242 ILIWDLRN 249 (416)
T ss_dssp CCEEETTS
T ss_pred EEEEeCCC
Confidence 66555553
No 172
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=61.85 E-value=34 Score=23.14 Aligned_cols=75 Identities=11% Similarity=-0.080 Sum_probs=47.9
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
.+.+++..|..+.++.+-.. .+.|...++........+...-..+..+++.+....++.+-...+.|...++...
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~----dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGR----DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp CEEEEEECSSCSSCEEEEES----SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred ceeEEEeCCCCCCeEEEEeC----CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 34678888855555555554 4788888875443333333334567789998877566666666677777776653
No 173
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=59.86 E-value=44 Score=23.75 Aligned_cols=77 Identities=5% Similarity=-0.101 Sum_probs=47.0
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
..+.+++.+|..+.++.+-.. .+.|...++............-..+..++.++....|+-+. ..+.|...+.+|.
T Consensus 150 ~~V~~v~~~p~~~~~las~s~----Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~ 224 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLA----DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQ 224 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEET----TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCC
T ss_pred CceEEEEECCCCCCEEEEEEC----CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCc
Confidence 345678888866777776655 57788877754422211112234678888888766666555 3456666666654
Q ss_pred Ce
Q psy959 101 NR 102 (109)
Q Consensus 101 ~~ 102 (109)
..
T Consensus 225 ~~ 226 (434)
T 2oit_A 225 EK 226 (434)
T ss_dssp EE
T ss_pred cc
Confidence 33
No 174
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=59.42 E-value=58 Score=25.05 Aligned_cols=70 Identities=14% Similarity=0.128 Sum_probs=46.7
Q ss_pred CCCeEEEEecCCCCCCCeEEEEEc---CCC--CcEEEEeCC-------CCCceeEEEe-cCCCeEEEEeCCC----CeEE
Q psy959 31 RLRTLYYTDWGRFGTAGKILRTTM---AGS--LKKVIIEKD-------LSQPSGLAID-FDDEMLYWTDAVR----EKIE 93 (109)
Q Consensus 31 ~~g~lywsd~~~~~~~~~I~~~~~---dG~--~~~~l~~~~-------~~~p~glaiD-~~~~~lYw~D~~~----~~I~ 93 (109)
..+++||+-.......+.++|... +|. ..++++..+ .....+.++. |.+++|.|+.... ..|.
T Consensus 125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~ 204 (751)
T 2xe4_A 125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIE 204 (751)
T ss_dssp ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEE
T ss_pred ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEE
Confidence 478999986543222457888887 676 677777632 1234567888 8888877765432 2599
Q ss_pred EEeCCCC
Q psy959 94 RSDLAGN 100 (109)
Q Consensus 94 ~~~~dG~ 100 (109)
..+++|.
T Consensus 205 v~dl~~g 211 (751)
T 2xe4_A 205 FKRISDP 211 (751)
T ss_dssp EEETTCT
T ss_pred EEECCCC
Confidence 9998876
No 175
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=57.79 E-value=42 Score=22.85 Aligned_cols=71 Identities=7% Similarity=-0.018 Sum_probs=38.3
Q ss_pred cceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 23 RRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 23 p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
+.+++..|..+.++.+-.. ...|...++. +.....+ .........+++.+..+++.-+-...+.|...+++
T Consensus 229 v~~v~~sp~~~~~la~g~~----d~~i~~wd~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDE----TGNVSLVNIKNPDSAQTS-AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp EEEEEECTTSTTEEEEEES----SSCEEEEESSCGGGCEEE-CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ccchhhhhcccceEEEeec----ccceeEEECCCCcEeEEE-eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 4678888877777766544 4677777774 3333333 22234456677766554433322223344444443
No 176
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=56.06 E-value=45 Score=22.73 Aligned_cols=55 Identities=7% Similarity=-0.120 Sum_probs=32.9
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCe
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEM 81 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~ 81 (109)
.+.+++..|..+.++.+-.. .+.|...++. +.....+. ........+++.+...+
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~----dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDE----NGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp CEEEEEECSSCTTEEEEEET----TSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSC
T ss_pred cceeeeecCCCCcceEEecc----CCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCe
Confidence 35678888877777776554 4778877775 44444443 23345567777665544
No 177
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=55.66 E-value=45 Score=22.54 Aligned_cols=69 Identities=19% Similarity=0.136 Sum_probs=43.5
Q ss_pred CCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCC-C------CcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCe
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAG-S------LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREK 91 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG-~------~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~ 91 (109)
++.+...+|++| +|.||-. . ...+++.+... . ..+.|-.....-=..+.+| .++.||-+. .++
T Consensus 39 gw~~~~~laf~P-~G~LYaV-~-----~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD-~~G~LYav~--dG~ 108 (236)
T 1tl2_A 39 GWSNFKFLFLSP-GGELYGV-L-----NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFD-PNGYLYAVS--KDK 108 (236)
T ss_dssp SCTTCSEEEECT-TSCEEEE-E-----TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEEC-TTSCEEEEE--TTE
T ss_pred ccccceeEEECC-CccEEEE-e-----CCeEEEECCCCCCcccccccccEecccccccceEEEEC-CCCCEEEeC--CCE
Confidence 367888999999 9999988 2 46888887622 1 1233322222223457777 566777772 267
Q ss_pred EEEEeC
Q psy959 92 IERSDL 97 (109)
Q Consensus 92 I~~~~~ 97 (109)
|.+.+-
T Consensus 109 iyr~~p 114 (236)
T 1tl2_A 109 LYKASP 114 (236)
T ss_dssp EEEESC
T ss_pred EEEeCC
Confidence 777654
No 178
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=55.53 E-value=41 Score=22.08 Aligned_cols=89 Identities=7% Similarity=-0.105 Sum_probs=53.8
Q ss_pred cCCCCCccEEEe-cC-CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEE
Q psy959 6 KDLLKTHRSLLL-QA-IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLY 83 (109)
Q Consensus 6 ~~l~G~~~~~li-~~-l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lY 83 (109)
..+.|+..+.+. .+ -....++++.|....|+ +-.. .+.|...++........+...-.....+++.+....|+
T Consensus 16 ~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~-~~~~----dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 90 (369)
T 3zwl_B 16 LYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLF-SCSK----DSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCV 90 (369)
T ss_dssp CCSSCCSEEEEEEECCSSCEEEEEECTTSCEEE-EEES----SSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred eEEeccccccEEEEEeeceEEEEEEcCCCCEEE-EEeC----CCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEE
Confidence 345677665543 43 45567899999444454 4433 47888888754433333333345677888888766666
Q ss_pred EEeCCCCeEEEEeCCCC
Q psy959 84 WTDAVREKIERSDLAGN 100 (109)
Q Consensus 84 w~D~~~~~I~~~~~dG~ 100 (109)
-+.. .+.|...+++..
T Consensus 91 s~~~-dg~i~iwd~~~~ 106 (369)
T 3zwl_B 91 TGSA-DYSIKLWDVSNG 106 (369)
T ss_dssp EEET-TTEEEEEETTTC
T ss_pred EEeC-CCeEEEEECCCC
Confidence 5543 456666666543
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=55.19 E-value=65 Score=24.27 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=47.1
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEc-CCCCcEEEEeCCCCCceeEEEecCCCeEEEEeC---CCCeEEEEeCCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTM-AGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA---VREKIERSDLAG 99 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~-dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~---~~~~I~~~~~dG 99 (109)
.+++..+ .+.++++-... ...+|.+.++ +|...+.+.. ......+++.++....|+.+-. ....|...++..
T Consensus 339 ~~~~~~~-~~~lv~~~~~~--g~~~l~~~~~~~g~~~~~l~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 339 EWVACVR-SNFLVLCYLHD--VKNTLQLHDLATGALLKIFPL-EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEEEEET-TTEEEEEEEET--TEEEEEEEETTTCCEEEEECC-CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EEEEEEc-CCEEEEEEEEC--CEEEEEEEECCCCCEEEecCC-CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 3455554 67777775432 1357888888 6764444422 2334556777776777776533 356899999875
Q ss_pred CC--eEEE
Q psy959 100 NN--REAL 105 (109)
Q Consensus 100 ~~--~~~l 105 (109)
.. .+++
T Consensus 415 g~~~~~~l 422 (710)
T 2xdw_A 415 EELEPRVF 422 (710)
T ss_dssp SSCCCEEE
T ss_pred CccceEEe
Confidence 54 4444
No 180
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=55.10 E-value=47 Score=22.66 Aligned_cols=73 Identities=5% Similarity=-0.109 Sum_probs=44.5
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC--------CcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEE
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS--------LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIE 93 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~--------~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~ 93 (109)
...+++..|..+.++.+-.. .+.|...+++.. ....+ ......+..+++.+....++.+-...+.|.
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~----dg~v~vw~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSE----DCTVMVWEIPDGGLVLPLREPVITL-EGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CEEEEEECTTCTTEEEEEET----TSEEEEEECCTTCCSSCBCSCSEEE-ECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred CEEEEEeCCCCCCEEEEEeC----CCeEEEEEccCCCCccccCCceEEe-cCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 34578888855555555544 578888887543 23333 333456778888887755555544455666
Q ss_pred EEeCCC
Q psy959 94 RSDLAG 99 (109)
Q Consensus 94 ~~~~dG 99 (109)
..++..
T Consensus 158 iwd~~~ 163 (402)
T 2aq5_A 158 VWDVGT 163 (402)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 666553
No 181
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=54.25 E-value=43 Score=21.91 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=32.0
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
.++++|+ .|.||.... ...|.+.+.+|.....+ .........+++|. .+.||.+. +.|...+.+|.
T Consensus 140 ~~~~~~~-~g~l~vgt~-----~~~l~~~d~~g~~~~~~-~~~~~~~~~~~~d~-~g~l~v~t---~~l~~~d~~g~ 205 (330)
T 3hxj_A 140 ATPIVSE-DGTIYVGSN-----DNYLYAINPDGTEKWRF-KTNDAITSAASIGK-DGTIYFGS---DKVYAINPDGT 205 (330)
T ss_dssp SCCEECT-TSCEEEECT-----TSEEEEECTTSCEEEEE-ECSSCCCSCCEECT-TCCEEEES---SSEEEECTTSC
T ss_pred eeeEEcC-CCEEEEEcC-----CCEEEEECCCCCEeEEE-ecCCCceeeeEEcC-CCEEEEEe---CEEEEECCCCc
Confidence 4456665 566666543 25666666664332222 11222344455553 34455544 45555554443
No 182
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=53.57 E-value=44 Score=21.85 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=43.6
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
..+.++++|+ .|.||..... ..+.+.+.+|.....+. .....+..+++| ..+.||.+.. .+.|.+.+.+|.
T Consensus 215 ~~~~~~~~~~-~g~l~v~t~~-----~gl~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~g~l~v~t~-~ggl~~~d~~g~ 285 (330)
T 3hxj_A 215 WTVTRPAISE-DGTIYVTSLD-----GHLYAINPDGTEKWRFK-TGKRIESSPVIG-NTDTIYFGSY-DGHLYAINPDGT 285 (330)
T ss_dssp CCCSCCEECT-TSCEEEEETT-----TEEEEECTTSCEEEEEE-CSSCCCSCCEEC-TTSCEEEECT-TCEEEEECTTSC
T ss_pred cceeceEECC-CCeEEEEcCC-----CeEEEECCCCCEeEEee-CCCCccccceEc-CCCeEEEecC-CCCEEEECCCCc
Confidence 4567788887 7788887653 67777766665543332 222334556666 3456666554 446777776655
Q ss_pred C
Q psy959 101 N 101 (109)
Q Consensus 101 ~ 101 (109)
.
T Consensus 286 ~ 286 (330)
T 3hxj_A 286 E 286 (330)
T ss_dssp E
T ss_pred E
Confidence 4
No 183
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=52.50 E-value=61 Score=23.16 Aligned_cols=78 Identities=12% Similarity=0.048 Sum_probs=48.7
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
....++++.|....|. +-.. ...|...++++.....+.. .-..+..+++.+....|.-+.. .+.|...+.+|.
T Consensus 427 ~~v~~~~~s~d~~~l~-~~~~----d~~v~~w~~~~~~~~~~~~-~~~~v~~~~~spd~~~las~~~-d~~i~iw~~~~~ 499 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIA-SASD----DKTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASASD-DKTVKLWNRNGQ 499 (577)
T ss_dssp SCEEEEEECTTSSEEE-EEET----TSEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSC
T ss_pred CCeEEEEECCCCCEEE-EEcC----CCEEEEEECCCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeC-CCEEEEEcCCCC
Confidence 4456788888554544 4333 4778888887766555543 3456778899887776655443 445666667766
Q ss_pred CeEEE
Q psy959 101 NREAL 105 (109)
Q Consensus 101 ~~~~l 105 (109)
..+.+
T Consensus 500 ~~~~~ 504 (577)
T 2ymu_A 500 LLQTL 504 (577)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55444
No 184
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=52.25 E-value=50 Score=22.07 Aligned_cols=77 Identities=8% Similarity=-0.047 Sum_probs=43.3
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCc-EEEEe------------CCCCCceeEEEecCCCeEEEEeC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLK-KVIIE------------KDLSQPSGLAIDFDDEMLYWTDA 87 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~-~~l~~------------~~~~~p~glaiD~~~~~lYw~D~ 87 (109)
....++++.|..+.++.+-.. .+.|...+++.... ..+.. .....+..++..+..+.++.+-.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS----DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET----TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred CcEEEEEEecCCCCEEEEEcC----CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 455789999845555555444 47888888864432 22210 12345667777774554444444
Q ss_pred CCCeEEEEeCCCCC
Q psy959 88 VREKIERSDLAGNN 101 (109)
Q Consensus 88 ~~~~I~~~~~dG~~ 101 (109)
..+.|...+++...
T Consensus 120 ~d~~i~iwd~~~~~ 133 (408)
T 4a11_B 120 FDKTLKVWDTNTLQ 133 (408)
T ss_dssp TTSEEEEEETTTTE
T ss_pred CCCeEEEeeCCCCc
Confidence 44566666655433
No 185
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=51.73 E-value=58 Score=22.66 Aligned_cols=75 Identities=12% Similarity=0.073 Sum_probs=47.4
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCC--CCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKD--LSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~--~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
....+|+..|..+.++.+-.. .+.|..-++.+...+.+.... ......+++++....|+-.. ..+.|...+++
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~----D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~dg~i~~wd~~ 239 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSM----EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD-NVGNVILLNMD 239 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECS----SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC-SSSBEEEEESS
T ss_pred CCEEEEEEeCCCCCEEEEEeC----CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe-CCCcEeeeccC
Confidence 345688998877777777655 578888888876666555432 22345678877665554443 34556666665
Q ss_pred CC
Q psy959 99 GN 100 (109)
Q Consensus 99 G~ 100 (109)
|.
T Consensus 240 ~~ 241 (435)
T 4e54_B 240 GK 241 (435)
T ss_dssp SC
T ss_pred cc
Confidence 54
No 186
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=51.72 E-value=48 Score=21.72 Aligned_cols=73 Identities=14% Similarity=-0.046 Sum_probs=40.2
Q ss_pred CCcceEEeeC---CCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEE----eCCCCCceeEEEecCCCeEEEEeCCCCeE
Q psy959 21 PGRRHFMPPI---RLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVII----EKDLSQPSGLAIDFDDEMLYWTDAVREKI 92 (109)
Q Consensus 21 ~~p~~iavd~---~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~----~~~~~~p~glaiD~~~~~lYw~D~~~~~I 92 (109)
....+++..| ....++.. .. .+.|...++. +.....+. ......+..+++.+....++.+-...+.|
T Consensus 210 ~~v~~~~~~~~~~~~~~l~~~-~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 284 (357)
T 3i2n_A 210 NGVCSLEFDRKDISMNKLVAT-SL----EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL 284 (357)
T ss_dssp SCEEEEEESCSSSSCCEEEEE-ES----TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CceEEEEcCCCCCCCCEEEEE-CC----CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcE
Confidence 3456778887 44444443 33 4677776664 22222221 13345677888887766455555555555
Q ss_pred EEEeCC
Q psy959 93 ERSDLA 98 (109)
Q Consensus 93 ~~~~~d 98 (109)
...+++
T Consensus 285 ~iwd~~ 290 (357)
T 3i2n_A 285 HLWKYE 290 (357)
T ss_dssp EEEEEE
T ss_pred EEeecC
Confidence 555543
No 187
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=51.53 E-value=55 Score=22.39 Aligned_cols=76 Identities=9% Similarity=-0.143 Sum_probs=48.2
Q ss_pred CCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeC--CCCeEEEEeC
Q psy959 20 IPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA--VREKIERSDL 97 (109)
Q Consensus 20 l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~--~~~~I~~~~~ 97 (109)
-....+++..| .+.++.+-.. .+.|...++........+......+..+++.+....++.+-. ..+.|...++
T Consensus 217 ~~~v~~~~~~~-~~~~l~s~~~----d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 217 SSEVCGLAWRS-DGLQLASGGN----DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp SSCEEEEEECT-TSSEEEEEET----TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred CCCeeEEEEcC-CCCEEEEEeC----CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 34567888888 5555555443 478888888654443333334456778888887777777654 3566766666
Q ss_pred CCC
Q psy959 98 AGN 100 (109)
Q Consensus 98 dG~ 100 (109)
...
T Consensus 292 ~~~ 294 (401)
T 4aez_A 292 ATG 294 (401)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 188
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=48.71 E-value=59 Score=21.86 Aligned_cols=81 Identities=11% Similarity=0.037 Sum_probs=50.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe--CCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE--KDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~--~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
....+++..|....++.+-.. .+.|...+++.......+. ..-..+.++++.+.++.++.+-...+.|...++.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK----GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB----TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred CCEEEEEECCCCCCEEEEEcC----CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 456788999854245555444 4789999987655554443 2345667888887554544444455677777777
Q ss_pred CCCeEEE
Q psy959 99 GNNREAL 105 (109)
Q Consensus 99 G~~~~~l 105 (109)
+...+.+
T Consensus 150 ~~~~~~~ 156 (383)
T 3ei3_B 150 GSVIQVF 156 (383)
T ss_dssp SCEEEEE
T ss_pred CCceEEE
Confidence 6544443
No 189
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=47.90 E-value=47 Score=24.81 Aligned_cols=75 Identities=7% Similarity=-0.084 Sum_probs=48.0
Q ss_pred cceEEeeCCCCeEEEEecCCC----CCCCeEEEEEcCCCCc---EEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy959 23 RRHFMPPIRLRTLYYTDWGRF----GTAGKILRTTMAGSLK---KVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERS 95 (109)
Q Consensus 23 p~~iavd~~~g~lywsd~~~~----~~~~~I~~~~~dG~~~---~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~ 95 (109)
..++++.|...+|.++..... +....|...++++... +.+ ......++..|.+++|.++. ...|...
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~--~~~i~~~ 135 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVY--QNNIYLK 135 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC----CSSBCCEEECSSTTCEEEEE--TTEEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec----CcccccceECCCCCEEEEEE--CCeEEEE
Confidence 678899997777777653100 0026788888876543 222 13466788888888888775 3577777
Q ss_pred eCCCCCeE
Q psy959 96 DLAGNNRE 103 (109)
Q Consensus 96 ~~dG~~~~ 103 (109)
++++....
T Consensus 136 ~~~~g~~~ 143 (719)
T 1z68_A 136 QRPGDPPF 143 (719)
T ss_dssp SSTTSCCE
T ss_pred eCCCCCcE
Confidence 77654433
No 190
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=45.54 E-value=68 Score=21.72 Aligned_cols=70 Identities=10% Similarity=0.033 Sum_probs=40.6
Q ss_pred eEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcE-EEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 25 HFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKK-VIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 25 ~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~-~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
+++++| .+.+..+-.. .+.|...++...... .+.......+..+++++....++.+-...+.|...++..
T Consensus 252 ~~~~s~-~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 252 NLEFGT-YGKYVIAGHV----SGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp TTCSSC-TTEEEEEEET----TSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred ceEEcC-CCCEEEEEcC----CCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 345556 4544444443 477888887544332 332223346778888887773444444456777777754
No 191
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=43.75 E-value=71 Score=21.42 Aligned_cols=79 Identities=13% Similarity=0.024 Sum_probs=50.3
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCC--CCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKD--LSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~--~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
...+++..|..+.++.+-.. ...|...++.+.....+.... -..+..+++.+....|+.+.. .+.|...+++|
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~ 194 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSI----RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS-TGRLLLLGLDG 194 (383)
T ss_dssp BEEEEEEETTEEEEEEEEET----TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET-TSEEEEEETTS
T ss_pred ceeEEEeCCCCCCEEEEEeC----CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECC-CCCEEEEECCC
Confidence 44578888855555555544 578888888875555554322 245778899887776666554 45676677766
Q ss_pred CCeEEE
Q psy959 100 NNREAL 105 (109)
Q Consensus 100 ~~~~~l 105 (109)
.....+
T Consensus 195 ~~~~~~ 200 (383)
T 3ei3_B 195 HEIFKE 200 (383)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 544443
No 192
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=43.49 E-value=94 Score=22.87 Aligned_cols=71 Identities=10% Similarity=0.032 Sum_probs=43.2
Q ss_pred CCcceEEeeCCCCeE-EEEecCCCCCCCeEEEE-EcCC-CCcEEEEeCCCCCceeEEEecCCCeEEEEeC-CCCeEEEEe
Q psy959 21 PGRRHFMPPIRLRTL-YYTDWGRFGTAGKILRT-TMAG-SLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA-VREKIERSD 96 (109)
Q Consensus 21 ~~p~~iavd~~~g~l-ywsd~~~~~~~~~I~~~-~~dG-~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~-~~~~I~~~~ 96 (109)
..|.-++|.| +|.+ ||-....+ ...++.. .+.| .....+.. ..|.|+.+-...++||.... +...|..--
T Consensus 107 ~~pGlliVsp-tG~VryWesIs~~--~~~~ei~~~L~~~E~vt~l~n---~epaGfIlaTStgrl~~lsirGkp~l~~~~ 180 (450)
T 1xks_A 107 QAVAVMVATR-EGSIRYWPSLAGE--DTYTEAFVDSGGDKTYSFLTA---VQGGSFILSSSGSQLIRLIPESSGKIHQHI 180 (450)
T ss_dssp TTEEEEEECT-TCEEEEESCTTCT--TCCEEEECC----CCEEEEEE---ETTTEEEEEETTCCEEEEEECTTSCEEEEE
T ss_pred CCceEEEEcC-CccEEEccccCCC--CceEEEEecCCCCceEEEEee---cCCceEEEEeccceEEEEEecCCceEEEEE
Confidence 4777899999 7765 99887542 3555533 3344 33444433 24999999888888887764 334444443
Q ss_pred C
Q psy959 97 L 97 (109)
Q Consensus 97 ~ 97 (109)
+
T Consensus 181 l 181 (450)
T 1xks_A 181 L 181 (450)
T ss_dssp C
T ss_pred e
Confidence 3
No 193
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=40.03 E-value=86 Score=21.31 Aligned_cols=77 Identities=10% Similarity=-0.033 Sum_probs=50.5
Q ss_pred cceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC--cEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCCC
Q psy959 23 RRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL--KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAGN 100 (109)
Q Consensus 23 p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~--~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG~ 100 (109)
+..++..| .+.++.+-... +....|...++.... ...........+..+++++.+..||.+-...+.|...+++..
T Consensus 223 ~~~~~~~~-~~~~l~~g~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 223 PVHAVFVS-EGKILTTGFSR-MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp CCEEEECS-TTEEEEEEECT-TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred ceEEEEcC-CCcEEEEeccC-CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 57788888 56666554210 015788888886433 222222334567889999999999998876777888777654
Q ss_pred C
Q psy959 101 N 101 (109)
Q Consensus 101 ~ 101 (109)
.
T Consensus 301 ~ 301 (402)
T 2aq5_A 301 A 301 (402)
T ss_dssp T
T ss_pred C
Confidence 4
No 194
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=39.30 E-value=88 Score=21.18 Aligned_cols=69 Identities=7% Similarity=-0.134 Sum_probs=36.5
Q ss_pred cceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy959 23 RRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSD 96 (109)
Q Consensus 23 p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~ 96 (109)
..++++.| .|..+.+-.. ...|...++........+......+..+++.+..+.++.+-...+.|...+
T Consensus 142 V~~v~~sp-dg~~l~sgs~----dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd 210 (357)
T 4g56_B 142 VKTLSVFS-DGTQAVSGGK----DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWD 210 (357)
T ss_dssp EEEEEECS-SSSEEEEEET----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECC
T ss_pred EEEEEECC-CCCEEEEEeC----CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEE
Confidence 45788888 4444444433 467777776543333223333445667777666655554443334444433
No 195
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=38.39 E-value=1.2e+02 Score=22.87 Aligned_cols=19 Identities=11% Similarity=0.080 Sum_probs=15.2
Q ss_pred CCceeEEEecCCCeEEEEe
Q psy959 68 SQPSGLAIDFDDEMLYWTD 86 (109)
Q Consensus 68 ~~p~glaiD~~~~~lYw~D 86 (109)
....++++|+.++.+|+..
T Consensus 393 ~~w~~~a~dp~~~~~yv~~ 411 (599)
T 1w6s_A 393 HNQGHDSYDPKRELFFMGI 411 (599)
T ss_dssp SCSCBCEEETTTTEEEEEE
T ss_pred cCCCCccCCCCCCEEEEec
Confidence 3446789999999999864
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=37.50 E-value=1.3e+02 Score=22.58 Aligned_cols=71 Identities=14% Similarity=0.129 Sum_probs=42.1
Q ss_pred CCCCeEEEEecCCCCCCCeEEEEEcCCCCc---EEEEeCC-CCCceeEEEecCCCeEEEEeC--CCCeEEEEeCCCCCeE
Q psy959 30 IRLRTLYYTDWGRFGTAGKILRTTMAGSLK---KVIIEKD-LSQPSGLAIDFDDEMLYWTDA--VREKIERSDLAGNNRE 103 (109)
Q Consensus 30 ~~~g~lywsd~~~~~~~~~I~~~~~dG~~~---~~l~~~~-~~~p~glaiD~~~~~lYw~D~--~~~~I~~~~~dG~~~~ 103 (109)
+..+ +|+.... .....+|.+.++++... +.++... -....++++. +++|+++-. +..+|...+++|...+
T Consensus 280 ~~g~-l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~ 355 (695)
T 2bkl_A 280 WKDR-FYVLTDE-GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVR 355 (695)
T ss_dssp ETTE-EEEEECT-TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEE
T ss_pred cCCc-EEEEECC-CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeE
Confidence 3344 6665321 11268999999976542 5555432 2334566665 677777654 3567888888776444
Q ss_pred E
Q psy959 104 A 104 (109)
Q Consensus 104 ~ 104 (109)
.
T Consensus 356 ~ 356 (695)
T 2bkl_A 356 T 356 (695)
T ss_dssp E
T ss_pred E
Confidence 3
No 197
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=37.14 E-value=46 Score=24.88 Aligned_cols=81 Identities=7% Similarity=-0.103 Sum_probs=42.0
Q ss_pred ceEEeeCCCCeEEEEecCCCCCCCeEEEEE----cCCCCcEEEE----eCCCCCce-----eEEEecCCCeEEEE-eC--
Q psy959 24 RHFMPPIRLRTLYYTDWGRFGTAGKILRTT----MAGSLKKVII----EKDLSQPS-----GLAIDFDDEMLYWT-DA-- 87 (109)
Q Consensus 24 ~~iavd~~~g~lywsd~~~~~~~~~I~~~~----~dG~~~~~l~----~~~~~~p~-----glaiD~~~~~lYw~-D~-- 87 (109)
.+++.-|. +.+.++..........|..++ .++...+.+. ...-.... .++..+..+.||+. ..
T Consensus 256 ~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 256 SWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 35666674 666655222111134688887 5433322222 11111222 56777777777663 32
Q ss_pred CCCeEEEEeCCCCCeEEE
Q psy959 88 VREKIERSDLAGNNREAL 105 (109)
Q Consensus 88 ~~~~I~~~~~dG~~~~~l 105 (109)
+...|...+++|...+.+
T Consensus 335 g~~~l~~~~~~~~~~~~l 352 (719)
T 1z68_A 335 GYKHIHYIKDTVENAIQI 352 (719)
T ss_dssp SCEEEEEESSCSTTCEEC
T ss_pred CceEEEEEECCCCceEec
Confidence 345788888877654433
No 198
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=36.12 E-value=89 Score=20.35 Aligned_cols=77 Identities=6% Similarity=-0.063 Sum_probs=49.1
Q ss_pred CCcceEEeeCCC--CeEEEEecCCCCCCCeEEEEEcCC--CCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy959 21 PGRRHFMPPIRL--RTLYYTDWGRFGTAGKILRTTMAG--SLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSD 96 (109)
Q Consensus 21 ~~p~~iavd~~~--g~lywsd~~~~~~~~~I~~~~~dG--~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~ 96 (109)
....+++..|.. |.++.+-.. .+.|...+++. ......+...-..+..+++.+....|+-+.. .+.|...+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd 114 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSW----ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC-DKTAKMWD 114 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEET----TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECC----CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC-CCcEEEEE
Confidence 455789999965 666666554 57888888864 3332334434556788888887766665543 45666666
Q ss_pred CCCCCe
Q psy959 97 LAGNNR 102 (109)
Q Consensus 97 ~dG~~~ 102 (109)
++....
T Consensus 115 ~~~~~~ 120 (368)
T 3mmy_A 115 LSSNQA 120 (368)
T ss_dssp TTTTEE
T ss_pred cCCCCc
Confidence 665443
No 199
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=36.04 E-value=92 Score=20.47 Aligned_cols=72 Identities=10% Similarity=-0.081 Sum_probs=43.0
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCC--cEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSL--KKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~--~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
....++++.|. +.++.+-.. .+.|...++++.. ....+...-..+..+++.+....|+-+.. .+.|...++.
T Consensus 9 ~~i~~~~~s~~-~~~l~~~~~----d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~ 82 (372)
T 1k8k_C 9 EPISCHAWNKD-RTQIAICPN----NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT-DRNAYVWTLK 82 (372)
T ss_dssp SCCCEEEECTT-SSEEEEECS----SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET-TSCEEEEEEE
T ss_pred CCeEEEEECCC-CCEEEEEeC----CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC-CCeEEEEECC
Confidence 34578899984 444444433 4788888887653 22223333456788999887777666554 3344444443
No 200
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=34.60 E-value=1.4e+02 Score=22.30 Aligned_cols=74 Identities=7% Similarity=-0.106 Sum_probs=45.2
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC-CcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS-LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~-~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
....+++..|....|+.... .+.|...+++.. .....+...-..+..++..+..+.++.+-...+.|...++++
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSD-----DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp SCEEEEEECSSSSEEEEEET-----TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCEEEEEEeCCCCEEEEEcC-----CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 45677888885556654443 478888888654 333334434456778888874555455444456666666653
No 201
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=34.56 E-value=1e+02 Score=20.56 Aligned_cols=70 Identities=7% Similarity=-0.122 Sum_probs=40.3
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCC-CCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAG-SLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG-~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
....++++.|....|+... . .+.|...++.. .....+ ...-..+..+++.+.. ++.+-...+.|...++.
T Consensus 248 ~~i~~~~~~~~~~~l~~~~-~----d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSAS-D----DGTLRIWHGGNGNSQNCF-YGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLK 318 (425)
T ss_dssp SCEEEEEEETTTTEEEEEE-T----TSCEEEECSSSBSCSEEE-CCCSSCEEEEEEETTT--EEEEEETTSEEEEEETT
T ss_pred CceEEEEECCCCCEEEEEc-C----CCEEEEEECCCCccceEe-cCCCccEEEEEECCCC--EEEEEeCCCcEEEEECC
Confidence 3456788888554444443 3 47788887754 333433 3334466778887655 34444445566666654
No 202
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=33.90 E-value=98 Score=20.15 Aligned_cols=61 Identities=10% Similarity=-0.026 Sum_probs=39.5
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDA 87 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~ 87 (109)
...++++.|....|+-.. . .+.|...++........+......+..+++.+....|.-+..
T Consensus 275 ~v~~~~~sp~~~~l~s~~-~----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVG-S----DGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp CEEEEEECTTTCCEEEEE-T----TSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred ceEEEEEecCCCEEEEEc-c----CCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 366889999555555444 3 478888888643332222333456788999988888877754
No 203
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=33.50 E-value=1.1e+02 Score=20.63 Aligned_cols=72 Identities=7% Similarity=-0.092 Sum_probs=46.4
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
....+++..|. +.++.+-.. .+.|...+++ +.....+ ......+..+++.+....|+-+.. .+.|...++..
T Consensus 140 ~~v~~~~~~~~-~~~l~s~s~----d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~ 212 (420)
T 3vl1_A 140 SEITKLKFFPS-GEALISSSQ----DMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDRGRNVLSASL-DGTIRLWECGT 212 (420)
T ss_dssp SCEEEEEECTT-SSEEEEEET----TSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETTTTEEEEEET-TSCEEEEETTT
T ss_pred CccEEEEECCC-CCEEEEEeC----CCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCCCCEEEEEcC-CCcEEEeECCC
Confidence 45568899884 444445443 4788888885 5555544 334556788999988777775544 44566666553
No 204
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=32.92 E-value=1e+02 Score=20.19 Aligned_cols=60 Identities=0% Similarity=-0.109 Sum_probs=37.5
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEE
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWT 85 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~ 85 (109)
..+.++++.|....|+... . .+.|...++........+......+..+++++....|.-.
T Consensus 203 ~~v~~~~~~~~~~~l~~~~-~----d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVS-H----DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp SCEEEEEECSSSSEEEEEE-T----TTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEe-C----CCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 3467889998544555444 3 4788888885333333333334467888998777666555
No 205
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=32.39 E-value=41 Score=17.05 Aligned_cols=22 Identities=9% Similarity=0.054 Sum_probs=16.1
Q ss_pred CCCCcceEEeeCCCCeEEEEecC
Q psy959 19 AIPGRRHFMPPIRLRTLYYTDWG 41 (109)
Q Consensus 19 ~l~~p~~iavd~~~g~lywsd~~ 41 (109)
.|..-.-..+|+ +|..||.|..
T Consensus 11 ~LP~GWe~~~~~-~G~~Yyinh~ 32 (54)
T 1wmv_A 11 DLPYGWEQETDE-NGQVFFVDHI 32 (54)
T ss_dssp CSCTTEEEEECT-TSCEEEEESS
T ss_pred CCCcCcEEEECC-CCCEEEEeCC
Confidence 454445567886 8999999876
No 206
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=32.12 E-value=1.5e+02 Score=22.43 Aligned_cols=15 Identities=7% Similarity=0.302 Sum_probs=12.6
Q ss_pred eeEEEecCCCeEEEE
Q psy959 71 SGLAIDFDDEMLYWT 85 (109)
Q Consensus 71 ~glaiD~~~~~lYw~ 85 (109)
.++++|+.++.+|..
T Consensus 384 ~~~a~dp~~g~~yv~ 398 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIP 398 (668)
T ss_dssp SCCEEETTTTEEEEE
T ss_pred CcceECCCCCEEEEe
Confidence 358999999999974
No 207
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=28.66 E-value=1.4e+02 Score=20.26 Aligned_cols=71 Identities=13% Similarity=0.043 Sum_probs=41.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
....++++.| .|.+..+-.. ...|...++. |.....+.......+.++++.|....|.=+. ..+.|...++
T Consensus 270 ~~V~~~~~Sp-dg~~lasgs~----D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S-~D~tvrvw~i 341 (365)
T 4h5i_A 270 KGITSMDVDM-KGELAVLASN----DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVS-AANTIHIIKL 341 (365)
T ss_dssp SCEEEEEECT-TSCEEEEEET----TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEE-TTSEEEEEEC
T ss_pred CCeEeEEECC-CCCceEEEcC----CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEe-CCCeEEEEEc
Confidence 3456788888 5555445444 4778888774 3333333332345678999988776654433 3445555554
No 208
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=28.64 E-value=2e+02 Score=22.14 Aligned_cols=92 Identities=21% Similarity=0.202 Sum_probs=58.1
Q ss_pred eeecCCCCCccEEEe-cCCCCc-ceEEeeCCCCeE--EEE-ecCCCC-------CCCeEEEEEcCCCCcEEEEeCCCCCc
Q psy959 3 STDKDLLKTHRSLLL-QAIPGR-RHFMPPIRLRTL--YYT-DWGRFG-------TAGKILRTTMAGSLKKVIIEKDLSQP 70 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p-~~iavd~~~g~l--yws-d~~~~~-------~~~~I~~~~~dG~~~~~l~~~~~~~p 70 (109)
.+.++|||....+++ .+.... .-.|.|..++.| -|. |....+ .++.+..+++||-.+..|+...
T Consensus 270 ~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs---- 345 (591)
T 2zux_A 270 AGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS---- 345 (591)
T ss_dssp EEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETT----
T ss_pred eeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEee----
Confidence 467899999777776 554443 345678877765 564 332110 2478999999998887777532
Q ss_pred eeEEEecCCCeEEEEeCC-CCeEEEEeCCCC
Q psy959 71 SGLAIDFDDEMLYWTDAV-REKIERSDLAGN 100 (109)
Q Consensus 71 ~glaiD~~~~~lYw~D~~-~~~I~~~~~dG~ 100 (109)
.++|.....||=+..+ ...+...++|..
T Consensus 346 --~~iD~dG~~L~st~~gHGDa~hv~dldP~ 374 (591)
T 2zux_A 346 --MAVDHDGKGMYSTGLGHGDALHTGDLDPG 374 (591)
T ss_dssp --EEECTTSCEEEECSCCCCSCEEEECCCTT
T ss_pred --eEECCCCCEeeeCCCCCCCeeEEeecCCC
Confidence 4778555555444443 346677777765
No 209
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=28.38 E-value=1.3e+02 Score=19.66 Aligned_cols=72 Identities=7% Similarity=-0.056 Sum_probs=40.3
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC-CcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS-LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~-~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
....++++.|. +.++.+-.. .+.|..-++... .....+...-.....++++|..+.++.+-...+.|...++
T Consensus 98 ~~v~~~~~~~~-~~~l~sgs~----D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 98 DYIRSIAVHPT-KPYVLSGSD----DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp SCEEEEEECSS-SSEEEEEET----TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred CcEEEEEEcCC-CCEEEEECC----CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 34567888884 444445444 577888777543 2223333334456778888765544444333444554444
No 210
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=26.70 E-value=1.3e+02 Score=19.47 Aligned_cols=73 Identities=8% Similarity=-0.149 Sum_probs=42.2
Q ss_pred cceEEeeCCC---CeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 23 RRHFMPPIRL---RTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 23 p~~iavd~~~---g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
..+++..|.. |.++.+-.. .+.|...++........+...-..+..+++.+.++.++.+-...+.|...+++.
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGS----RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEET----TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred EEEEEeccCCCCCCCEEEEecC----CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 4567776642 455555544 578888887644433333444556788888874444444433455666666653
No 211
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=26.65 E-value=82 Score=24.05 Aligned_cols=16 Identities=13% Similarity=0.304 Sum_probs=13.5
Q ss_pred eeEEEecCCCeEEEEe
Q psy959 71 SGLAIDFDDEMLYWTD 86 (109)
Q Consensus 71 ~glaiD~~~~~lYw~D 86 (109)
.++++|+.++.+|...
T Consensus 392 ~~~a~dp~~~~~yv~~ 407 (689)
T 1yiq_A 392 QPMSYNPDTGLVYIPA 407 (689)
T ss_dssp SCCEEETTTTEEEEEE
T ss_pred CcceECCCCCEEEEec
Confidence 4589999999999874
No 212
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=26.26 E-value=1.3e+02 Score=19.23 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=43.7
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLAG 99 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~dG 99 (109)
....++++.|....++.... .+.|...++........+......+..+++++....|+-+. ..+.|...++..
T Consensus 142 ~~i~~~~~~~~~~~l~~~~~-----dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~ 214 (337)
T 1gxr_A 142 PACYALAISPDSKVCFSCCS-----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG-LDNTVRSWDLRE 214 (337)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTT
T ss_pred CceEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe-cCCcEEEEECCC
Confidence 34567888885445554443 47788888865443333333345677888887766665554 344566666554
No 213
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=25.66 E-value=2.3e+02 Score=21.92 Aligned_cols=93 Identities=19% Similarity=0.129 Sum_probs=0.0
Q ss_pred eeecCCCCCccEEEe-cCCCCcceE-EeeCCCCeE--EEEecCCCC--------CCCeEEEEEcCCCCcEEEEeCCCCCc
Q psy959 3 STDKDLLKTHRSLLL-QAIPGRRHF-MPPIRLRTL--YYTDWGRFG--------TAGKILRTTMAGSLKKVIIEKDLSQP 70 (109)
Q Consensus 3 ~~~~~l~G~~~~~li-~~l~~p~~i-avd~~~g~l--ywsd~~~~~--------~~~~I~~~~~dG~~~~~l~~~~~~~p 70 (109)
.+.+.|||.....++ .+.....-+ |.|...+.| .|.-..... ..+.+..+++||-.+..|+...
T Consensus 274 ~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs---- 349 (620)
T 2zuy_A 274 AGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGA---- 349 (620)
T ss_dssp EEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETT----
T ss_pred eeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEee----
Q ss_pred eeEEEecCCCeEEEEeCC-CCeEEEEeCCCCC
Q psy959 71 SGLAIDFDDEMLYWTDAV-REKIERSDLAGNN 101 (109)
Q Consensus 71 ~glaiD~~~~~lYw~D~~-~~~I~~~~~dG~~ 101 (109)
.++|.....||=+..+ ...+...++|...
T Consensus 350 --~~iD~dG~~L~st~~gHGDa~hv~d~dP~r 379 (620)
T 2zuy_A 350 --MAVDHDGTGLYSTGLGHGDAMHVGDLDPSR 379 (620)
T ss_dssp --EEECTTSSEEEECSCCCCSCEEEECSCTTS
T ss_pred --eEECCCCCEEeecCCCCCceeEEEecCCCC
No 214
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=25.58 E-value=1.5e+02 Score=19.64 Aligned_cols=72 Identities=6% Similarity=-0.109 Sum_probs=41.9
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
....++++.| .+.++.+-.. .+.|...++........+...-..+..+++.|....|.-+. ..+.|...++.
T Consensus 185 ~~v~~~~~~~-~~~~l~sg~~----d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s-~d~~v~iwd~~ 256 (340)
T 1got_B 185 GDVMSLSLAP-DTRLFVSGAC----DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS-DDATCRLFDLR 256 (340)
T ss_dssp SCEEEEEECT-TSSEEEEEET----TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETT
T ss_pred CceEEEEECC-CCCEEEEEeC----CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc-CCCcEEEEECC
Confidence 3456788888 5556666554 57888888754333333333345677888887766555443 23444444443
No 215
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=25.46 E-value=1.7e+02 Score=20.25 Aligned_cols=75 Identities=11% Similarity=-0.091 Sum_probs=45.4
Q ss_pred CCcceEEeeCC--CCeEEEEecCCCCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 21 PGRRHFMPPIR--LRTLYYTDWGRFGTAGKILRTTMA-GSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 21 ~~p~~iavd~~--~g~lywsd~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
..+.+++..|. .+.++.+-.. ...|...++. +.....+.......+..+++. ....|+.+. ..+.|...++
T Consensus 196 ~~v~~~~~sp~~~~~~~l~s~~~----d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~-~d~~v~vwd~ 269 (450)
T 2vdu_B 196 SMLTDVHLIKDSDGHQFIITSDR----DEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG-GDDKIFAWDW 269 (450)
T ss_dssp SCEEEEEEEECTTSCEEEEEEET----TSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE-SSSEEEEEET
T ss_pred CceEEEEEcCCCCCCcEEEEEcC----CCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe-CCCeEEEEEC
Confidence 34567888884 1544444443 4788888876 444444343334567888888 555565554 4567877777
Q ss_pred CCCC
Q psy959 98 AGNN 101 (109)
Q Consensus 98 dG~~ 101 (109)
....
T Consensus 270 ~~~~ 273 (450)
T 2vdu_B 270 KTGK 273 (450)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 6443
No 216
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=25.21 E-value=2.2e+02 Score=21.33 Aligned_cols=78 Identities=5% Similarity=-0.124 Sum_probs=48.8
Q ss_pred EEecCCCCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCC-CcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEE
Q psy959 15 LLLQAIPGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGS-LKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIE 93 (109)
Q Consensus 15 ~li~~l~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~-~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~ 93 (109)
.+-..-....+++++|....|..... .+.|...+.... ....+ ...-..+..++..+....|.-+.. .+.|.
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~-----~g~v~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~ 80 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLY-----SGRVEIWNYETQVEVRSI-QVTETPVRAGKFIARKNWIIVGSD-DFRIR 80 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEET-----TSEEEEEETTTTEEEEEE-ECCSSCEEEEEEEGGGTEEEEEET-TSEEE
T ss_pred eeecCCCceEEEEECCCCCEEEEEeC-----CCEEEEEECCCCceEEEE-ecCCCcEEEEEEeCCCCEEEEEeC-CCeEE
Confidence 33334566789999996666665543 478888887543 33333 333456778888887777766654 45666
Q ss_pred EEeCCC
Q psy959 94 RSDLAG 99 (109)
Q Consensus 94 ~~~~dG 99 (109)
..+++.
T Consensus 81 vw~~~~ 86 (814)
T 3mkq_A 81 VFNYNT 86 (814)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 666543
No 217
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=25.20 E-value=1.6e+02 Score=19.87 Aligned_cols=71 Identities=10% Similarity=-0.118 Sum_probs=38.8
Q ss_pred CcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeC
Q psy959 22 GRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDL 97 (109)
Q Consensus 22 ~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~ 97 (109)
...++++.| .|....+-.. .+.|..-++........+...-.....+++.+....++.+-...+.|...++
T Consensus 129 ~V~~v~~sp-dg~~l~sgs~----d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~ 199 (344)
T 4gqb_B 129 IVSTVSVLS-SGTQAVSGSK----DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDT 199 (344)
T ss_dssp CEEEEEECT-TSSEEEEEET----TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CEEEEEECC-CCCEEEEEeC----CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccc
Confidence 346788888 4544445443 4677777775333222222233456677777766665555443444544444
No 218
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=24.81 E-value=1.7e+02 Score=20.09 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=39.2
Q ss_pred CcceEEeeCC-CCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeC-C------------CCCceeEEEecC--CCeEEEE
Q psy959 22 GRRHFMPPIR-LRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEK-D------------LSQPSGLAIDFD--DEMLYWT 85 (109)
Q Consensus 22 ~p~~iavd~~-~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~-~------------~~~p~glaiD~~--~~~lYw~ 85 (109)
...+|++||. .+.||..-..- .....|.+..-.|..-+.+... . ......|++|+. .+.||..
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g-~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTG-HLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC---CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCC-CCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEE
Confidence 4568999984 45666553320 0012677755445443333211 0 113446888874 5667664
Q ss_pred eCCCCeEEEEeCCCC
Q psy959 86 DAVREKIERSDLAGN 100 (109)
Q Consensus 86 D~~~~~I~~~~~dG~ 100 (109)
-. .+.|.+..=.|.
T Consensus 135 ~~-~ggl~~S~DgG~ 148 (394)
T 3b7f_A 135 TS-PQGLFRSTDHGA 148 (394)
T ss_dssp EE-TTEEEEESSTTS
T ss_pred ec-CCcEEEEcCCCC
Confidence 32 345666554444
No 219
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=24.53 E-value=2.5e+02 Score=21.85 Aligned_cols=51 Identities=12% Similarity=0.184 Sum_probs=38.0
Q ss_pred CCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-CCCCCceeEEEe--cCCCeEEEEe
Q psy959 32 LRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-KDLSQPSGLAID--FDDEMLYWTD 86 (109)
Q Consensus 32 ~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-~~~~~p~glaiD--~~~~~lYw~D 86 (109)
.++||..|.. +.+|-|.++|--...-|+. .+.+-.+|+... |.++.+|-.-
T Consensus 142 GrylfiNdka----n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~ 195 (638)
T 3sbq_A 142 GKYLFINDKA----NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANA 195 (638)
T ss_dssp EEEEEEEETT----TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEE
T ss_pred eEEEEEecCC----CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecc
Confidence 4688888876 7999999999777665655 567778899887 4566665544
No 220
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=23.88 E-value=2.5e+02 Score=21.67 Aligned_cols=76 Identities=18% Similarity=0.124 Sum_probs=44.0
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe-C----------CCCCceeEEEecCC-CeEEEEeCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE-K----------DLSQPSGLAIDFDD-EMLYWTDAV 88 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~-~----------~~~~p~glaiD~~~-~~lYw~D~~ 88 (109)
....+|++||.+..++|.-.. ...|.+..-.|..=+.+.. . .......|++|+.+ +.+|.+-..
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~----~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTD----IGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEES----SSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred CceeEEEeCCCCCCEEEEEec----cCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 456789999987555555443 3678877755655333322 1 12346778999854 567765431
Q ss_pred ------CCeEEEEeCCCC
Q psy959 89 ------REKIERSDLAGN 100 (109)
Q Consensus 89 ------~~~I~~~~~dG~ 100 (109)
...|.+..=.|.
T Consensus 97 ~~~~~~~~~i~~S~DgG~ 114 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGK 114 (763)
T ss_dssp CTTTCSCCEEEEESSTTS
T ss_pred cccCCCCceEEEECCCCC
Confidence 345555544444
No 221
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=23.48 E-value=1.7e+02 Score=19.39 Aligned_cols=72 Identities=7% Similarity=-0.044 Sum_probs=39.1
Q ss_pred cceEEeeCCC--CeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEecCCCeEEEEeCCCCeEEEEeCC
Q psy959 23 RRHFMPPIRL--RTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLSQPSGLAIDFDDEMLYWTDAVREKIERSDLA 98 (109)
Q Consensus 23 p~~iavd~~~--g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glaiD~~~~~lYw~D~~~~~I~~~~~d 98 (109)
..+++..+.. +.++.+-.. .+.|...++........+...-..+..+++.+....++.+-...+.|...++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~----~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 144 VYSHHMSPVSTKHCLVAVGTR----GPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp EEEEEECSSCSSCCEEEEEES----SSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eeeeEeecCCCCCcEEEEEcC----CCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 3455555532 223344333 46777777753332222333344567888888777655554445556666553
No 222
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=20.76 E-value=1.9e+02 Score=19.14 Aligned_cols=54 Identities=7% Similarity=-0.186 Sum_probs=32.1
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEe------CC---------------CCCceeEEEecCC
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIE------KD---------------LSQPSGLAIDFDD 79 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~------~~---------------~~~p~glaiD~~~ 79 (109)
....+++..|....| .+-.. .+.|...++........+. .. -..+..+++.+..
T Consensus 292 ~~v~~~~~~~~~~~l-~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 292 SWVMSLSFNDSGETL-CSAGW----DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp SCEEEEEECSSSSEE-EEEET----TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred CcEEEEEECCCCCEE-EEEeC----CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 345678888844444 44443 5788888885433332233 22 3457788888775
No 223
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=20.08 E-value=2.4e+02 Score=19.99 Aligned_cols=73 Identities=10% Similarity=-0.136 Sum_probs=41.5
Q ss_pred CCcceEEeeCCCCeEEEEecCCCCCCCeEEEEEcCCCCcEEEEeCCCC---CceeEEEecC-CCeEEEEeCCCCeEEEEe
Q psy959 21 PGRRHFMPPIRLRTLYYTDWGRFGTAGKILRTTMAGSLKKVIIEKDLS---QPSGLAIDFD-DEMLYWTDAVREKIERSD 96 (109)
Q Consensus 21 ~~p~~iavd~~~g~lywsd~~~~~~~~~I~~~~~dG~~~~~l~~~~~~---~p~glaiD~~-~~~lYw~D~~~~~I~~~~ 96 (109)
....+++..|....++.+-.. .+.|...+.........+..... .+..+++.+. ...|+-+.. .+.|...+
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~----d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~vwd 235 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGD----DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-DRKISCFD 235 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEET----TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-TCCEEEEE
T ss_pred ccEEEEEECCCCCcEEEEEeC----CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-CCeEEEEE
Confidence 345678888855545555544 47777777653332222322233 5678888887 555554443 45666666
Q ss_pred CC
Q psy959 97 LA 98 (109)
Q Consensus 97 ~d 98 (109)
+.
T Consensus 236 ~~ 237 (615)
T 1pgu_A 236 GK 237 (615)
T ss_dssp TT
T ss_pred CC
Confidence 54
Done!