BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9590
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 301 bits (771), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 137/168 (81%), Positives = 155/168 (92%)
Query: 101 ISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGET 160
+ D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGET
Sbjct: 531 MPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGET 590
Query: 161 GSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFED 220
GSGKTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFED
Sbjct: 591 GSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFED 650
Query: 221 CTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
CTS ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF
Sbjct: 651 CTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLF 698
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 782 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 841
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 842 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 834 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV 300
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1185 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISRA 1216
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 301 bits (771), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 137/168 (81%), Positives = 155/168 (92%)
Query: 101 ISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGET 160
+ D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGET
Sbjct: 555 MPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGET 614
Query: 161 GSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFED 220
GSGKTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFED
Sbjct: 615 GSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFED 674
Query: 221 CTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
CTS ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF
Sbjct: 675 CTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLF 722
Score = 197 bits (502), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 806 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 865
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 866 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 905
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 858 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 905
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV 300
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1209 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISRA 1240
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 277 bits (709), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 129/165 (78%), Positives = 148/165 (89%), Gaps = 1/165 (0%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKK G K +FG+++ L+I EQR+SLPIYKLK ELI+AV DNQ+L+VIGETGSG
Sbjct: 485 DMPEWKKDAFG-KTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSG 543
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQ+TQYLAEAG+T +GKIGCTQPRRVAAMSVAKRVAEEFGCRLG+EVGY IRFEDCT
Sbjct: 544 KTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 603
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
+T+IKYMTDGMLLRE L+D +L+ YSVIMLDEAHERTIHTDVLF
Sbjct: 604 PDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLF 648
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 79/103 (76%), Positives = 90/103 (87%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEID+AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF+ PPG RKVV+A
Sbjct: 729 FLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVA 788
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAE SLTIDGI+YVVDPGF KQ VYN K G++SLV+TPISQ
Sbjct: 789 TNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 831
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAE SLTIDGI+YVVDPGF KQ VYN K G++SLV+TPISQ
Sbjct: 784 KVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 831
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 28/31 (90%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTK+SK K+ +R+EPLY++Y EPN+WR+S+
Sbjct: 1135 DPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1165
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 153/176 (86%)
Query: 103 QDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGS 162
+++PEW KHV G K+++G++TNL++VEQR+SLPI+ LK L++A+ DNQIL+V+GETGS
Sbjct: 508 KEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGS 567
Query: 163 GKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCT 222
GKTTQ+TQY EAG RGKIGCTQPRRVAAMSVAKRVAEE+GC+LG +VGYTIRFEDCT
Sbjct: 568 GKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCT 627
Query: 223 SSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
S +T+IKYMTDGMLLRECL+D DL+ YS+IMLDEAHERTIHTDVLF K + K+
Sbjct: 628 SQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/100 (89%), Positives = 95/100 (95%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+ AP G RKVVIATNI
Sbjct: 757 GQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNI 816
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGIFYVVDPGFVKQK+YN K+GMDSLVVTPISQ
Sbjct: 817 AETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGIFYVVDPGFVKQK+YN K+GMDSLVVTPISQ
Sbjct: 809 KVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV 300
D TKLS FK+NQ+++PL++KY + NAWRI+RV
Sbjct: 1160 DSTKLSTFKRNQKIDPLFDKYADANAWRITRV 1191
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 254 bits (648), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 144/168 (85%), Gaps = 1/168 (0%)
Query: 101 ISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGET 160
I ++PEWKK V G +GK T+ +I EQR+SLPI+ L+ ++AVS++Q+L+VIGET
Sbjct: 475 IDTEIPEWKK-VTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGET 533
Query: 161 GSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFED 220
GSGKTTQ+ QYLAEAG+ RGKIGCTQPRRVAAMSV+KRVAEEFGC+LGQEVGY IRFED
Sbjct: 534 GSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFED 593
Query: 221 CTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
CTS ET+IK+MTDG+LLRECL+D +L+ YSVI+LDEAHERTI TDVLF
Sbjct: 594 CTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLF 641
Score = 181 bits (458), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 92/100 (92%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEID AC+ILYERMKSLG +VP+LIILPVYSALPSEMQT+IFE APPGSRKVVIATNI
Sbjct: 725 GQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNI 784
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YV+DPGF KQK +N K GMDSLVV PISQ
Sbjct: 785 AETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQ 824
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YV+DPGF KQK +N K GMDSLVV PISQ
Sbjct: 777 KVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQ 824
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DP K+SK K+ +++EPLY+KY +PNAWR S+
Sbjct: 1128 DPNKISKRKRKEKIEPLYDKYNDPNAWRPSK 1158
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 231 bits (590), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 138/169 (81%), Gaps = 2/169 (1%)
Query: 101 ISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGET 160
++ + P W++ S+GK+T L++ EQR+ LP++KL+ + ++AVS NQIL+++GET
Sbjct: 477 LTSETPSWRQ-ATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGET 535
Query: 161 GSGKTTQITQYLAEAGFTARGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFE 219
GSGKTTQITQYLAE G+T+ K IGCTQPRRVAAMSVAKRVAEE GCR+G+EVGYTIRFE
Sbjct: 536 GSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFE 595
Query: 220 DCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
D TS T IKYMTDGML RECLVD L+ YSVI+LDEAHERT+ TDVLF
Sbjct: 596 DKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLF 644
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/103 (78%), Positives = 91/103 (88%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEIDT+CEILYER K LG +PEL+ILPVYSALPSE+Q+RIFE APPG RKVVIA
Sbjct: 725 FLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIA 784
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETSLTIDGI+YVVDPGFVKQ ++ K GMDSL+VTPISQ
Sbjct: 785 TNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQ ++ K GMDSL+VTPISQ
Sbjct: 780 KVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 25/31 (80%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
+ ++SK KKN ++ PLYN++E+P+ WRIS+
Sbjct: 1132 NANQVSKTKKNLKVLPLYNRFEKPDEWRISK 1162
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 231 bits (589), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 107 EWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTT 166
EW+K+ + + S+GK+T+L I QRQ+LP+Y ++ ELI+AV DNQ L+++GETGSGKTT
Sbjct: 456 EWEKNRMN-ESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTT 514
Query: 167 QITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSET 226
QITQYL E GF+ G IGCTQPRRVAA+SVAKRVAEE GC++G +VGYTIRFED T +T
Sbjct: 515 QITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDT 574
Query: 227 LIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
IKYMTDGML RE L+D +++ YSVIMLDEAHERT+ TDVLF K + K+
Sbjct: 575 RIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKR 626
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 90/111 (81%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEID+ CEILY+R+K+LG + EL+ILPVYSALPSE+Q++IFE P GSRKVV ATNI
Sbjct: 700 GQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNI 759
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIG 114
AETS+TIDGI+YVVDPGF K +YN++ G++ L+V+PISQ +K G
Sbjct: 760 AETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAG 810
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
EP +VV ATNIAETS+TIDGI+YVVDPGF K +YN++ G++ L+V+PISQ
Sbjct: 744 EPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQ 799
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 218 bits (555), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
Query: 123 KTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
+ +TI E R+SLP+Y + +LI AV + Q+LI++GETGSGKTTQI QYL EAGF+ GK
Sbjct: 455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK 514
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
IGCTQPRRVAAMSVA RVAEE GC+LG EVGY+IRFEDCTS +T+++YMTDGML+RE L
Sbjct: 515 IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLT 574
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
DL +YSV+++DEAHERT+HTD+LF K +++F+ + +L
Sbjct: 575 APDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKL 615
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 81/100 (81%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEE+D A E+L R + LG + ELII +YS LP+++Q +IFE PP +RKVV+ATNI
Sbjct: 684 GQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNI 743
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI YV+DPGF KQK++N +TGM+SLV+TP+S+
Sbjct: 744 AETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSR 783
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 47/56 (83%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
EP +VV+ATNIAETSLTIDGI YV+DPGF KQK++N +TGM+SLV+TP+S+
Sbjct: 728 EPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSR 783
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 133/164 (81%), Gaps = 2/164 (1%)
Query: 121 GKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR 180
+K ++I E R+SLP+Y + I+AV ++Q+LI+ GETGSGKTTQ+ QYL EAGF
Sbjct: 350 AEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG 409
Query: 181 GK-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRE 239
GK IGCTQPRRVAAMSVA RVA+E GC+LG +VGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 410 GKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLRE 469
Query: 240 CLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L + DL +YSV+M+DEAHERT+HTD+LF K +++F+K+ +L
Sbjct: 470 FLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKL 513
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 77/100 (77%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFE P +RKVV+ATNI
Sbjct: 583 GQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNI 642
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TIDGI YV+DPGF KQ +++++G++ L V IS+
Sbjct: 643 AETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K EP +VV+ATNIAETS+TIDGI YV+DPGF KQ +++++G++ L V I
Sbjct: 621 LQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTI 680
Query: 345 SQ 346
S+
Sbjct: 681 SK 682
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 124/151 (82%), Gaps = 2/151 (1%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK +I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 517 SEFAKKK--SILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY 574
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 575 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILL 634
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS I++DEAHER+++TDVLF
Sbjct: 635 RESLREADLDHYSAIIMDEAHERSLNTDVLF 665
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 749 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 807
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 808 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 798 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 124/151 (82%), Gaps = 2/151 (1%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK +I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 517 SEFAKKK--SILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY 574
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 575 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILL 634
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS I++DEAHER+++TDVLF
Sbjct: 635 RESLREADLDHYSAIIMDEAHERSLNTDVLF 665
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 749 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 807
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 808 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 798 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ AV+++QILI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRR 459
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 519
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 520 VVMVDEAHERTLHTDILFGLIKDVARFR 547
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 84/103 (81%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+A
Sbjct: 618 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVA 677
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 678 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 673 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 201 bits (512), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ A++++Q+LI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 399 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 458
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 459 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 518
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 519 VVMVDEAHERTLHTDILFGLIKDVARFR 546
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 84/103 (81%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+A
Sbjct: 617 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVA 676
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 677 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 719
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 672 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 719
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 201 bits (512), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ A++++Q+LI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 515
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 516 VVMVDEAHERTLHTDILFGLIKDVARFR 543
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 84/103 (81%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+A
Sbjct: 614 FLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVA 673
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 674 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 716
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 669 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 716
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 116/142 (81%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCT 186
+I +QR+ LP++ + +++ + +N ++I++GETGSGKTTQ+ QYL E GF G IGCT
Sbjct: 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCT 492
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
QPRRVAAMSVA+RVA+E G LGQ+VGY IRFEDCTS +T+IKYMTDG+LLRECL D L
Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552
Query: 247 NNYSVIMLDEAHERTIHTDVLF 268
+ YS I++DEAHER+++TDVLF
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLF 574
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 659 GQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNI 717
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+DPGF K KVYN + GMD+L + P+SQ
Sbjct: 718 AETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQ 757
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 41/50 (82%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+DPGF K KVYN + GMD+L + P+SQ
Sbjct: 708 MRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQ 757
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 126/157 (80%), Gaps = 2/157 (1%)
Query: 123 KTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT-ARG 181
K ++ R+SLP+Y+ K +L+KA+++ Q+L+++ ETGSGKTTQ+ Q+L EAG+T
Sbjct: 406 KVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNK 465
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
KI CTQPRRVAAMSVA RVA+E RLGQEVGY+IRFE+ TS +T+IKY+TDGMLLRE L
Sbjct: 466 KICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFL 525
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFK 277
+ DL +YSVI++DEAHERT+HTD+LF K +++F+
Sbjct: 526 TEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFR 562
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 79/103 (76%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQ+EI+ E + E + LG +PE+I+ P+Y+ LPSE+Q +IF+ PPG+RKVV+A
Sbjct: 633 FLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLA 692
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETS+TIDG+ +V+D GFVKQ +YN +TGM+SLV P S+
Sbjct: 693 TNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSR 735
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETS+TIDG+ +V+D GFVKQ +YN +TGM+SLV P S+
Sbjct: 688 KVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSR 735
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 112/139 (80%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPR 189
EQR+ LP + ++ +L+ + DNQ+LIV+GETGSGKTTQ+ Q+L E G+ G IGCTQPR
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPR 546
Query: 190 RVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNY 249
RVAAMSVAKRV+EE G RLG VGY+IRFED T +T+IKYMTDG+LLRE L+ +L Y
Sbjct: 547 RVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKY 606
Query: 250 SVIMLDEAHERTIHTDVLF 268
SVI++DEAHER+++TD+L
Sbjct: 607 SVIIMDEAHERSLNTDILM 625
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQE+I+ CEI+ +R+ L D P L ILP+YS +P+++Q +IF++A PG RKVV+A
Sbjct: 706 FMTGQEDIEATCEIIADRLNQLH-DAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVA 764
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETSLT+ GI YVVD G+ K K+YNSK G+D+L VTPISQ
Sbjct: 765 TNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQ 807
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +VV+ATNIAETSLT+ GI YVVD G+ K K+YNSK G+D+L VTPISQ
Sbjct: 758 VRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQ 807
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 120/154 (77%), Gaps = 2/154 (1%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
KK +F K+ I+E+R+ LP++K K + IK + +NQ++I++GETGSGKTTQI Q++ +A
Sbjct: 59 KKETFSKRY-YEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDA 117
Query: 176 GFTARGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
G GK +G TQPRRVAA+SVAKRV+EE LG+EVGY+IRFE+ +S+ T +KY+TDG
Sbjct: 118 GLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDG 177
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
MLLRE + D LN Y VI+LDEAHERT+ TD+LF
Sbjct: 178 MLLRESMSDPTLNKYDVIILDEAHERTLSTDILF 211
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ G+EEI+ C + + G +P + LP+YS+LP Q++IF+ RK +++
Sbjct: 292 FLTGEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTC--KERKCIVS 347
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETSLTIDGI +VVDPGF KQK YN ++ ++SL+V PIS+
Sbjct: 348 TNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISK 390
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%)
Query: 284 PLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTP 343
P+Y + + + + + +++TNIAETSLTIDGI +VVDPGF KQK YN ++ ++SL+V P
Sbjct: 328 PIYQQSKIFDTCKERKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAP 387
Query: 344 ISQ 346
IS+
Sbjct: 388 ISK 390
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 106/135 (78%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +LN +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 254 LDEAHERTIHTDVLF 268
LDEAHERT+ TD+LF
Sbjct: 172 LDEAHERTLTTDILF 186
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 7/110 (6%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPG 53
+ GQ EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG
Sbjct: 278 FLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPG 337
Query: 54 SRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 114/143 (79%), Gaps = 2/143 (1%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IG 184
L+I +QRQ LP++KL++ ++ + + Q ++++GETG GK+TQI QYLAEAG+TA G+ +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDV 266
L YSVIMLDEAHERT++TD+
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTDI 187
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKVV 58
+ GQEE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV+
Sbjct: 280 FLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 339
Query: 59 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKS 118
+ATN+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ + G +S
Sbjct: 340 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQ--ASANQRAGRGGRS 397
Query: 119 SFGKKTNLTIVEQRQSLP 136
GK L E LP
Sbjct: 398 RSGKCYRLYTEEAFDKLP 415
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 8/79 (10%)
Query: 276 FKKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQ 327
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK
Sbjct: 306 MKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKL 365
Query: 328 KVYNSKTGMDSLVVTPISQ 346
+ YN +T ++ LVV P+SQ
Sbjct: 366 RAYNPRTAIECLVVVPVSQ 384
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 140/212 (66%), Gaps = 18/212 (8%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IG 184
L+I +QRQ LP++KL++ ++ + + Q ++++GETG GK+TQI QYLAEAG+TA G+ +G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFD-PTKLSKFKKNQRL------------EPLYNKYE 290
L YSVIMLDEAHERT++TD+ K+ K + + RL +N+ E
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNE 224
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDP 322
+ R + V++ + + +D IFY+ P
Sbjct: 225 TSDPARDTCVIL--TVGGRTFPVD-IFYLQSP 253
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKVV 58
+ GQEE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV+
Sbjct: 280 FLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 339
Query: 59 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKS 118
+ATN+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ + G +S
Sbjct: 340 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQ--ASANQRAGRGGRS 397
Query: 119 SFGKKTNLTIVEQRQSLP 136
GK L E LP
Sbjct: 398 RSGKCYRLYTEEAFDKLP 415
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 8/79 (10%)
Query: 276 FKKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQ 327
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK
Sbjct: 306 MKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKL 365
Query: 328 KVYNSKTGMDSLVVTPISQ 346
+ YN +T ++ LVV P+SQ
Sbjct: 366 RAYNPRTAIECLVVVPVSQ 384
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 178 bits (451), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 106/135 (78%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L+ +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 254 LDEAHERTIHTDVLF 268
LDEAHERT+ TD+LF
Sbjct: 172 LDEAHERTLTTDILF 186
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 7/110 (6%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPG 53
+ GQ EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG
Sbjct: 278 FLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPG 337
Query: 54 SRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 177 bits (450), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 113/145 (77%), Gaps = 3/145 (2%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK--I 183
LTI E R+ LP+++ K EL++ + NQ+LI++GETGSGKTTQ+ QYL E GFT +GK I
Sbjct: 214 LTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQI 273
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS-SETLIKYMTDGMLLRECLV 242
TQPRRVAA SVA RVA+E LG+EVGY IRFED T+ ++T++KYMTDGMLLRE L
Sbjct: 274 AITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLT 333
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
D L+ YS IM+DEAHERT+ TD+L
Sbjct: 334 DSKLSKYSCIMIDEAHERTLATDIL 358
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 67/103 (65%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEI+ L E M LG ++II P+Y+ LP E Q +IF+ P RKVV+A
Sbjct: 441 FLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLA 500
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETSLTIDGI YV+DPGFVK+ Y TGM L+ P S+
Sbjct: 501 TNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSR 543
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+P +VV+ATNIAETSLTIDGI YV+DPGFVK+ Y TGM L+ P S+
Sbjct: 488 QPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSR 543
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 6/178 (3%)
Query: 97 VVTPISQDLPEWKKHVIGGKKSSFGKKTNLT------IVEQRQSLPIYKLKHELIKAVSD 150
VV + QD V+G SS K++ + I+EQR++LPI++ L + + D
Sbjct: 52 VVNFLEQDTDFGANEVVGSDNSSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQD 111
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQ 210
N++++V+GETGSGK+TQI Q+L E + G + TQPRRVAA+++AKRVA E GCRLG+
Sbjct: 112 NRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGE 171
Query: 211 EVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
+VGY+IRF+D TS +T IKY+TDGMLLRE + D L+ Y ++LDEAHERT+ TD+L
Sbjct: 172 QVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLL 229
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQ+EI+ ++ K L ++P++ P++++LP E Q ++F A RKVV++
Sbjct: 310 FLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLS 369
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETS+TI GI YV+D G K K +NSK G++SL V PISQ
Sbjct: 370 TNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQ 412
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDG 348
+VV++TNIAETS+TI GI YV+D G K K +NSK G++SL V PISQ
Sbjct: 365 KVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSA 414
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 114/147 (77%), Gaps = 6/147 (4%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA---GFTARGK-- 182
I+E+R+ LP++ K + + ++ NQ LI++GETGSGKTTQI Q++ +A + +G+
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 183 -IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
+GCTQPRRVAAMSV++RVA+E +G+EVGY+IRFEDCTSS T++KY+TDGMLLRE +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLF 268
D L Y VI+LDEAHERT+ TDVLF
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLF 204
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 78/110 (70%), Gaps = 7/110 (6%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP-------PG 53
+ G+EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+ AP P
Sbjct: 285 FLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPA 344
Query: 54 SRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 345 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 394
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 347 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 394
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 105/135 (77%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + ++I+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 254 LDEAHERTIHTDVLF 268
LDEAHERT+ TD+LF
Sbjct: 172 LDEAHERTLTTDILF 186
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 7/110 (6%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPG 53
+ GQ EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG
Sbjct: 278 FLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPG 337
Query: 54 SRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 105/135 (77%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + ++I+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 254 LDEAHERTIHTDVLF 268
LDEAHERT+ TD+LF
Sbjct: 172 LDEAHERTLTTDILF 186
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 7/110 (6%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPD-------VPELIILPVYSALPSEMQTRIFEAAPPG 53
+ GQ EI+ +CE+L++ +S+ D + L+ILP Y ++ ++ Q RIF PPG
Sbjct: 278 FLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPG 337
Query: 54 SRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 106/143 (74%), Gaps = 2/143 (1%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA--EAGFTARGKIGC 185
I+E R+ LP+Y+ + E +K +NQI++ +GETGSGKTTQI Q++ E +I C
Sbjct: 68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIAC 127
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAAMSVAKRVA+E LG+EVGY IRFEDC+ TL+KYMTDGMLLRE + D
Sbjct: 128 TQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHM 187
Query: 246 LNNYSVIMLDEAHERTIHTDVLF 268
L+ YS I+LDEAHERT+ TD+L
Sbjct: 188 LSRYSCIILDEAHERTLATDILM 210
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 75/114 (65%), Gaps = 15/114 (13%)
Query: 1 MVKGQEEIDTAC-EILYE-----RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGS 54
+ G+EEI+ AC +I E R + GP L + P+Y +LP Q RIFE P +
Sbjct: 291 FLTGEEEIEDACRKITLEADDLVREGAAGP----LKVYPLYGSLPPNQQQRIFEPTPEDT 346
Query: 55 -----RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RKVVI+TNIAETSLTIDGI YVVDPGF KQK+YN + ++SL+V+PIS+
Sbjct: 347 KSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 400
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVI+TNIAETSLTIDGI YVVDPGF KQK+YN + ++SL+V+PIS+
Sbjct: 353 KVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 400
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/143 (56%), Positives = 109/143 (76%), Gaps = 2/143 (1%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQY--LAEAGFTARGKIGC 185
I++ R+ LP++ + E +K +NQI++ +GETGSGKTTQI Q+ E ++ C
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAAMSVA+RVAEE +LG+EVGY+IRFE+ TS++T++KYMTDGMLLRE + D D
Sbjct: 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205
Query: 246 LNNYSVIMLDEAHERTIHTDVLF 268
L+ YS I+LDEAHERT+ TD+L
Sbjct: 206 LSRYSCIILDEAHERTLATDILM 228
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 17/115 (14%)
Query: 1 MVKGQEEIDTAC-EILYE-----RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP--- 51
+ G++EI+ A +I E R + GP L + P+Y +LP Q RIFE AP
Sbjct: 309 FLTGEDEIEDAVRKISLEGDQLVREEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESH 364
Query: 52 ---PGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
PG RKVVI+TNIAETSLTIDGI YVVDPGF KQKVYN + ++SL+V+PIS+
Sbjct: 365 NGRPG-RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK 418
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVI+TNIAETSLTIDGI YVVDPGF KQKVYN + ++SL+V+PIS+
Sbjct: 371 KVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK 418
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 111/150 (74%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRR 190
QR+SLPI++ + +L+ + + ++IGETGSGKTTQI QYL E G + +G I TQPRR
Sbjct: 61 QRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 120
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAA+S+A RV++E LG+ VGYT+RFED TS +T IK++TDGMLLRE + D L YS
Sbjct: 121 VAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 180
Query: 251 VIMLDEAHERTIHTDVLFDPTKLSKFKKNQ 280
++LDEAHERTIHTDVLF K ++ ++ +
Sbjct: 181 CVILDEAHERTIHTDVLFGVVKTAQKRRKE 210
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEI+ + + + L P +++LP+Y++LP Q R+F+ AP G RKV+I+
Sbjct: 285 FLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIIS 344
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+ W++ G++ S
Sbjct: 345 TNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKT-QAWQRTGRAGREDS 402
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P +R +V+I+TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+
Sbjct: 335 PKGYR--KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 387
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 111/150 (74%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRR 190
QR+SLPI++ + +L+ + + ++IGETGSGKTTQI QYL E G + +G I TQPRR
Sbjct: 70 QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 129
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAA+S+A RV++E LG+ VGYT+RF+D TS +T IK++TDGMLLRE + D L YS
Sbjct: 130 VAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 189
Query: 251 VIMLDEAHERTIHTDVLFDPTKLSKFKKNQ 280
++LDEAHERTIHTDVLF K ++ ++ +
Sbjct: 190 CVILDEAHERTIHTDVLFGVVKAAQKRRKE 219
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQEEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+
Sbjct: 294 FLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIIS 353
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+ W++ G++ S
Sbjct: 354 TNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKT-QAWQRTGRAGREDS 411
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P +R +V+I+TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+
Sbjct: 344 PKGYR--KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 396
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 105/144 (72%), Gaps = 3/144 (2%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLF 268
L Y VI+LDEAHERT+ TD+L
Sbjct: 250 LLERYGVIILDEAHERTLATDILM 273
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 6/109 (5%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------S 54
+ GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP
Sbjct: 355 FLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 55 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RKVV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 416 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 105/144 (72%), Gaps = 3/144 (2%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLF 268
L Y VI+LDEAHERT+ TD+L
Sbjct: 250 LLERYGVIILDEAHERTLATDILM 273
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 6/109 (5%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------S 54
+ GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP
Sbjct: 355 FLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 55 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RKVV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 416 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 105/144 (72%), Gaps = 3/144 (2%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLF 268
L Y VI+LDEAHERT+ TD+L
Sbjct: 250 LLERYGVIILDEAHERTLATDILM 273
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 6/109 (5%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------S 54
+ GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP
Sbjct: 355 FLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG 414
Query: 55 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RKVV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 416 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 112/143 (78%), Gaps = 2/143 (1%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR--GKIGC 185
+++ R++LP+Y+ K E++ + N + ++IGETGSGK+TQI Q++ E + + G I
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAV 133
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAA+++A RVA+E GC+LG++VGY++RF++ T++ T +KY+TDGMLLRE +++ D
Sbjct: 134 TQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSD 193
Query: 246 LNNYSVIMLDEAHERTIHTDVLF 268
L YSVI++DEAHERT+ TD++
Sbjct: 194 LREYSVIVIDEAHERTVLTDLIL 216
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEEID A I+ + K + + VP ++ P+Y+ALP+ Q+ +F RKVV +T
Sbjct: 301 GQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFST 360
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
NIAETS+TI G+ +VVD G K KV+ + G+ +L+ PISQ
Sbjct: 361 NIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQ 402
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV +TNIAETS+TI G+ +VVD G K KV+ + G+ +L+ PISQ
Sbjct: 355 KVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQ 402
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 111/144 (77%), Gaps = 3/144 (2%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTA-RGK-IGC 185
I ++ LP+++ + +L+ + +NQ++++IGETGSGKTTQ+ QYL E G+ RGK I
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSE-TLIKYMTDGMLLRECLVDL 244
TQPRRVAA+SVAKRVA E LG+EVGY+IRFED T SE T +K++TDG+LLRE L+D
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 245 DLNNYSVIMLDEAHERTIHTDVLF 268
L+ YS +++DEAHER+++TD+L
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILL 486
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 9/112 (8%)
Query: 1 MVKGQEEIDTACEILYERM-----KSLG----PDVPELIILPVYSALPSEMQTRIFEAAP 51
+ GQE+I+T + L E+ K G ++ ++ ILP+YSALP+++Q +IF+
Sbjct: 569 FMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLH 628
Query: 52 PGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK++IATNIAETSLTI GI YV+D G+ K KVYN K G+DSLV+TPIS+
Sbjct: 629 GTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISK 680
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++IATNIAETSLTI GI YV+D G+ K KVYN K G+DSLV+TPIS+
Sbjct: 633 KIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISK 680
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 10/150 (6%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE---------AGFT 178
I E+R LP+++ K + ++ + +NQ + ++GETGSGKTTQI Q+ E
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 179 ARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLR 238
AR + CTQPRRVAAMSVA RVAEE LGQEVGY+IRFEDC S T++KY TDGMLLR
Sbjct: 129 AR-LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query: 239 ECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
E + L+ Y V++LDEAHERT+ TD+L
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILM 217
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 76/109 (69%), Gaps = 6/109 (5%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------S 54
+ GQEEI+ AC+ + +++LG D L +P+YS LP Q RIFE APP S
Sbjct: 299 FLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAIS 358
Query: 55 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V PIS+
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK 407
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
PN + VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V PIS+
Sbjct: 353 PNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK 407
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Query: 124 TNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK- 182
+L I +QR LPI+K + ++ + +I++GETG GK+TQ+ Q+L EAG+ A G+
Sbjct: 66 ASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQ 125
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
I TQPRRVA +++A RVAEE C LG +VGYT+RF+D + +T +K+MTDG+LLRE L
Sbjct: 126 IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILA 185
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVLF 268
D L+ YS+IM+DEAHER+ +TD+L
Sbjct: 186 DPLLSKYSIIMIDEAHERSCNTDILL 211
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ GQ+E++ CE L E +L + L ++P Y ALP+ Q + F++ P G+RKVV+A
Sbjct: 302 FLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVA 360
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWK 109
TNIAE S+TI GI YV+D G+VK + ++ G+++L+ +S+ E +
Sbjct: 361 TNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQR 409
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAE S+TI GI YV+D G+VK + ++ G+++L+ +S+
Sbjct: 356 KVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSK 403
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECM16 PE=1
SV=1
Length = 1267
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 103/146 (70%), Gaps = 7/146 (4%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR------G 181
I + R LP++ +H++++A+ N ++I+ GETGSGKTTQ+ Q+L EAGF A G
Sbjct: 384 IQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPG 443
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
+G TQPRRVAA+S+A+RVA E G G +VGY IRF+ +T +K+MTDG+LLRE +
Sbjct: 444 MVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM 502
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
D L YS I++DEAHER I+TD+L
Sbjct: 503 HDFKLTKYSSIIIDEAHERNINTDIL 528
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
L +LP+YS LP++ Q R+F+ P GSR ++ATN+AETSLTI G+ YVVD G K++ YN
Sbjct: 729 LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYN 788
Query: 89 SKTGMDSLVVTPISQ 103
G+ S V +S+
Sbjct: 789 ESNGVQSFEVGWVSK 803
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++ATN+AETSLTI G+ YVVD G K++ YN G+ S V +S+
Sbjct: 758 IVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSK 803
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 119 SFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
S TN + Q++ LPI K +++L+ AV NQI IV+G TG GKTTQI Q+L EAG+
Sbjct: 9 SLSTLTNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWA 68
Query: 179 AR-GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
++ G IGCTQPRR+ A SV++RV+ E G GY+I+F+ S +T IKYMTDG+LL
Sbjct: 69 SQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILL 128
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKN 279
E D L YS+++LDE HERT+ TD+L K K+N
Sbjct: 129 NEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRN 170
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ G++EI+ + + + + D L+ LP+++ L + Q R+F RKV+ +
Sbjct: 242 FLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFS 301
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TNIAETS+TIDGI YVVD GF KQ++YN T L+ PIS+
Sbjct: 302 TNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISK 344
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+ +TNIAETS+TIDGI YVVD GF KQ++YN T L+ PIS+
Sbjct: 297 KVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISK 344
>sp|O46072|KZ_DROME Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster
GN=kz PE=1 SV=1
Length = 1192
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 121/195 (62%), Gaps = 13/195 (6%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRV 191
R LPI + ++++ +++N I+IV GETGSGKTTQ+ Q+L EAG+ IG T+PRRV
Sbjct: 257 RLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTEPRRV 316
Query: 192 AAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSV 251
AA++++KRVA E EV Y IRFE + T IK+MTDG+LL+E D L+ YSV
Sbjct: 317 AAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLSKYSV 375
Query: 252 IMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSL 311
I+LDEAHER+++TD+L LS R+ PL +K +P + ++++ + +
Sbjct: 376 IILDEAHERSVYTDILVG--LLS------RIVPLRHKRGQP----LKLIIMSATLRVSDF 423
Query: 312 TIDGIFYVVDPGFVK 326
T + + + P +K
Sbjct: 424 TENTRLFKIPPPLLK 438
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 48/71 (67%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
L +LP+YS L SE Q RIF P G R V++TN+AETSLTI I YVVD G K ++Y+
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 89 SKTGMDSLVVT 99
TG+ + VVT
Sbjct: 677 KLTGVSAFVVT 687
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Query: 273 LSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 332
LS K+N+ P+ P+ R+ V++TN+AETSLTI I YVVD G K ++Y+
Sbjct: 626 LSSEKQNRIFLPV------PDGCRL--CVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDK 677
Query: 333 KTGMDSLVVT 342
TG+ + VVT
Sbjct: 678 LTGVSAFVVT 687
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 93/136 (68%)
Query: 133 QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVA 192
+SLP+ + K E+ K +S++Q+++V GETGSGKTTQ+ + E GF G IG TQPRR+A
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIA 140
Query: 193 AMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVI 252
A SVA R+AEE LG VGY +RF D S T IK MTDG+LL E D LN YS +
Sbjct: 141 ARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCL 200
Query: 253 MLDEAHERTIHTDVLF 268
++DEAHER+++ D +
Sbjct: 201 IIDEAHERSLNNDFIL 216
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 8/103 (7%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ G+ EI E L ++ ++ ILP+++ L ++ Q +IF P G ++V+A
Sbjct: 300 FMNGEREIRDTAEALQKQ------NLKHTEILPLFARLSAQEQNKIFH--PSGLNRIVLA 351
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TN+AETSLT+ I YV+DPG + Y+ +T + L + PISQ
Sbjct: 352 TNVAETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 394
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Query: 263 HTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDP 322
HT++L +LS ++N+ P ++R+V+ATN+AETSLT+ I YV+DP
Sbjct: 321 HTEILPLFARLSAQEQNKIFHPS----------GLNRIVLATNVAETSLTVPSIKYVIDP 370
Query: 323 GFVKQKVYNSKTGMDSLVVTPISQ 346
G + Y+ +T + L + PISQ
Sbjct: 371 GTARISRYSYRTKVQRLPIEPISQ 394
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A10.06c PE=3 SV=1
Length = 1183
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 13/160 (8%)
Query: 121 GKKTNLTIV-------EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA 173
G+KT TI+ E R +LPI + +++ + N ++I+ G TGSGKTTQ+ Q+L
Sbjct: 377 GRKTTYTIINRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLF 436
Query: 174 EAGFTAR-----GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLI 228
EAGF++ G I TQPRRVAA+S+AKRV+EE +V Y IRF+ + +T I
Sbjct: 437 EAGFSSPESENPGMIAITQPRRVAAVSIAKRVSEELTG-FSSKVSYQIRFDSTINPDTAI 495
Query: 229 KYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
K+MTDG+LLRE D L YS +++DEAHER+++TD+L
Sbjct: 496 KFMTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILL 535
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
+ +LP+YS L +E Q ++F+++P G R ++ATN+AETS+TI I YVVD G K++VYN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 89 SKTGMDSLVVTPISQ 103
KT + V IS+
Sbjct: 762 EKTSVQKFEVRWISK 776
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++ATN+AETS+TI I YVVD G K++VYN KT + V IS+
Sbjct: 731 IVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISK 776
>sp|P34305|RHA2_CAEEL Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans
GN=rha-2 PE=3 SV=2
Length = 1148
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 15/200 (7%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCT 186
I + R LPI+ + +++A+++N + +V GETGSGKTTQI Q+L EAG+ + G+ IG T
Sbjct: 229 IQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGIT 288
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
+PRRVAA+++A+RV E EV Y IR+E S T I +MTDG+L++E D+ L
Sbjct: 289 EPRRVAAIAMAQRVGVELA--KPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVML 346
Query: 247 NNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNI 306
YSVI++DEAHER++++DVL LS R+ PL +K P + V+++ +
Sbjct: 347 KKYSVILIDEAHERSMYSDVLIG--MLS------RIVPLRSKTARP----LRLVIMSATL 394
Query: 307 AETSLTIDGIFYVVDPGFVK 326
T +F ++ P +K
Sbjct: 395 RLDDFTHKKLFPLLTPKVIK 414
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 25 DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQ 84
D L LP+YS L Q R+F+ P G R VI+TN+AETSLTI G+ YV+D GF K+
Sbjct: 571 DCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKR 630
Query: 85 KVYNSKTGMDSLVVTPISQ 103
++Y+S TG+ V ISQ
Sbjct: 631 RLYDSITGVSRFAVCRISQ 649
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 290 EEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
E P R+ VI+TN+AETSLTI G+ YV+D GF K+++Y+S TG+ V ISQ
Sbjct: 595 ETPAGMRL--CVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQ 649
>sp|Q8IY37|DHX37_HUMAN Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37
PE=1 SV=1
Length = 1157
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 102/140 (72%), Gaps = 4/140 (2%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-GCTQP 188
E+R LPI + +++AV+++ I+IV GETGSGKTTQ+ Q+L EAGF++ I G T+P
Sbjct: 247 EERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEP 306
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEV-GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
RRVAA+++++RVA+E L Q V Y IR+E + ET IK+MTDG+LL+E D L
Sbjct: 307 RRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 364
Query: 248 NYSVIMLDEAHERTIHTDVL 267
Y V+++DEAHER+++TD+L
Sbjct: 365 RYKVVIIDEAHERSVYTDIL 384
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD G VK++ Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 89 SKTGMDSLVVTPISQ 103
TG+ S VT +SQ
Sbjct: 648 RVTGVSSFRVTWVSQ 662
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
V+ATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT +SQ
Sbjct: 617 VVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQ 662
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
G+K +FG+ L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL
Sbjct: 144 GQKQAFGRLAKLQ--RERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 201
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
AGF+ + CTQPRR+A +S+AKRV E + G +VGY IRFE S+ T I ++T G
Sbjct: 202 AGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVG 258
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
+LLR+ + L Y V+++DE HER +H D L
Sbjct: 259 LLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLL 292
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++SAL Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 409 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDP 468
Query: 90 KTGMDSLVVTPISQDLPEWKKHVIG 114
+ + L ISQ E +K G
Sbjct: 469 QAKLQRLQEFWISQASAEQRKGRAG 493
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 433 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 482
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 91/135 (67%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+LP+ + K ++++A+ D+Q++IV GETGSGKTTQ+ + E G +G IG TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+VA R+AEE G +GY +RF D S T++K MTDG+LL E D L Y I+
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 254 LDEAHERTIHTDVLF 268
+DEAHER+++ D L
Sbjct: 196 IDEAHERSLNIDFLL 210
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP+Y+ L + Q R+F++ R++V+ATN+AETSLT+ GI YV+DPG + Y+ +
Sbjct: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377
Query: 91 TGMDSLVVTPISQ 103
T + L + PISQ
Sbjct: 378 TKVQRLPIEPISQ 390
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 284 PLYNKYEEPNAWRI------SRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMD 337
PLY + R+ R+V+ATN+AETSLT+ GI YV+DPG + Y+ +T +
Sbjct: 322 PLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381
Query: 338 SLVVTPISQ 346
L + PISQ
Sbjct: 382 RLPIEPISQ 390
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats.
Identities = 63/153 (41%), Positives = 99/153 (64%), Gaps = 5/153 (3%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
+K +FG+ L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL A
Sbjct: 147 QKQAFGRLAKLQ--RERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA 204
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
GF+ + CTQPRR+A +S+AKRV E + G +VGY IRFE S+ T I ++T G+
Sbjct: 205 GFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGL 261
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
LLR+ + L Y V+++DE HER +H D L
Sbjct: 262 LLRQIQREPSLPQYQVLIVDEVHERHLHNDFLL 294
Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++SAL Q ++F+ AP G RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 411 VVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDP 470
Query: 90 KTGMDSLVVTPISQDLPEWKK 110
+ + L ISQ E +K
Sbjct: 471 QAKLQRLQEFWISQASAEQRK 491
Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 435 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 484
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE---AGFTARGKIG 184
++++R++LPI+K+K++ ++ ++ NQI++V SGK++QI Q+ AE AG G +
Sbjct: 57 LLKERETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVV 116
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQ + A+ +A RVA+E +G EVGY + FE+C +SET+++Y TD ML RE + +
Sbjct: 117 CTQAHKQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNP 176
Query: 245 DLNNYSVIMLDEAHERTIHTDVLF 268
L++Y V+++D+ +ER + TDVL
Sbjct: 177 LLSSYGVVIIDDVYERFVSTDVLL 200
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVY------SALPSEMQTRIFEAAPPGSRKVV 58
+EEI A E + + + P++ EL+ + +Y +P E + + + RKVV
Sbjct: 284 EEEIKRAYEHIKQEALHMNPELGELMPIALYPHQSISDYIPYE---ELDDNSKNPKRKVV 340
Query: 59 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKS 118
+ T++ E+ + + IF+V+D G K+KVYN++ +SLV PIS+ + +KH++ S
Sbjct: 341 LTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHILSS--S 398
Query: 119 SFGK 122
S GK
Sbjct: 399 SEGK 402
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ T++ E+ + + IF+V+D G K+KVYN++ +SLV PIS+
Sbjct: 338 KVVLTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLVTQPISK 385
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens
GN=YTHDC2 PE=1 SV=2
Length = 1430
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 100/145 (68%), Gaps = 5/145 (3%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR--GKIGCTQPR 189
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F +I CTQPR
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 249
Query: 190 RVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDLNN 248
R+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L+
Sbjct: 250 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLST 309
Query: 249 YSVIMLDEAHERTIHTDVLFDPTKL 273
+ +++DE HER +D L TKL
Sbjct: 310 VTHVIVDEVHERDRFSDFLL--TKL 332
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 48/73 (65%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
+ ++S + + Q ++ + P G RK++++TNIAETS+T++ + +V+D G VK+K +++
Sbjct: 658 VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL 717
Query: 91 TGMDSLVVTPISQ 103
+ L + IS+
Sbjct: 718 NFVTMLKMVWISK 730
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +++++TNIAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 681 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 730
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,625,990
Number of Sequences: 539616
Number of extensions: 5181777
Number of successful extensions: 21567
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 20997
Number of HSP's gapped (non-prelim): 488
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)