Your job contains 1 sequence.
>psy9590
MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA
TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSF
GKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR
GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLREC
LVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV
VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDGHP
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9590
(350 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 773 5.9e-98 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 745 5.1e-94 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 741 2.3e-93 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 741 2.4e-93 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 741 2.7e-93 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 739 2.8e-93 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 739 3.8e-93 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 739 4.2e-93 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 738 4.9e-93 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 739 5.1e-93 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 739 5.2e-93 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 676 2.4e-86 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 676 2.4e-86 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 685 1.4e-84 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 628 4.0e-78 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 621 4.1e-78 2
UNIPROTKB|H9KZI9 - symbol:LOC100858239 "Uncharacterized p... 737 5.9e-73 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 574 8.9e-73 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 579 6.4e-70 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 579 6.4e-70 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 534 1.7e-69 3
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 537 4.1e-69 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 532 1.3e-67 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 525 5.2e-67 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 635 4.7e-66 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 493 5.3e-66 3
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 509 8.9e-66 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 513 2.4e-65 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 521 1.7e-64 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 494 2.1e-63 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 498 3.9e-63 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 528 4.0e-63 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 528 4.0e-63 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 495 8.4e-63 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 495 8.4e-63 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 521 1.3e-62 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 521 1.3e-62 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 493 1.4e-62 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 493 1.4e-62 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 520 1.6e-62 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 492 1.7e-62 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 517 2.4e-62 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 518 2.7e-62 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 505 9.4e-62 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 472 9.9e-61 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 490 1.2e-60 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 483 2.8e-60 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 483 2.8e-60 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 485 4.0e-60 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 468 1.4e-59 2
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 532 1.2e-58 2
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 532 1.2e-58 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 467 1.7e-58 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 521 3.3e-58 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 569 1.2e-57 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 444 4.1e-57 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 430 4.8e-57 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 444 7.0e-57 2
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 446 1.0e-56 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 441 1.2e-56 2
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 455 1.8e-56 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 434 2.1e-56 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 439 3.3e-56 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 439 3.5e-56 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 451 4.6e-56 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 451 4.6e-56 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 431 4.8e-56 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 439 5.5e-56 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 430 6.8e-56 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 439 3.0e-55 2
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 442 3.6e-55 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 419 1.3e-54 2
RGD|1359618 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box po... 446 3.4e-54 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 414 9.8e-54 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 433 1.1e-53 2
MGI|MGI:1914737 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) bo... 441 1.2e-53 2
UNIPROTKB|Q08DS9 - symbol:DHX40 "Uncharacterized protein"... 440 1.6e-53 2
UNIPROTKB|F1S235 - symbol:LOC100519272 "Uncharacterized p... 440 1.6e-53 2
UNIPROTKB|E2RPC8 - symbol:DHX40 "Uncharacterized protein"... 440 1.6e-53 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 408 2.4e-53 2
UNIPROTKB|Q8IX18 - symbol:DHX40 "Probable ATP-dependent R... 438 2.6e-53 2
UNIPROTKB|J9NVQ3 - symbol:DHX40 "Uncharacterized protein"... 440 3.2e-53 2
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 422 6.6e-53 3
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 422 6.6e-53 3
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 414 1.7e-52 3
UNIPROTKB|F1NWM3 - symbol:DHX40 "Uncharacterized protein"... 428 2.5e-52 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 392 6.1e-52 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 394 3.3e-51 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 386 3.9e-51 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 400 4.9e-51 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 394 5.0e-51 2
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 394 6.6e-51 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 394 6.6e-51 2
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 394 6.6e-51 2
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 394 6.6e-51 2
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 394 6.6e-51 2
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 394 6.6e-51 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 417 2.0e-50 2
FB|FBgn0032194 - symbol:CG4901 species:7227 "Drosophila m... 418 6.0e-50 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 410 1.1e-49 2
WARNING: Descriptions of 205 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 773 (277.2 bits), Expect = 5.9e-98, Sum P(2) = 5.9e-98
Identities = 152/202 (75%), Positives = 172/202 (85%)
Query: 77 VDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLP 136
+DP + + + M + P ++PEWKKHVIGGKKSSFGKKT+LT+VEQRQSLP
Sbjct: 531 IDP-LPEDESRSLAANMRGMAAAP--PEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLP 587
Query: 137 IYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSV 196
IYKL+ +LIKAV+DNQILIVIGETGSGKTTQITQYL E GFTARGKIGCTQPRRVAAMSV
Sbjct: 588 IYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSV 647
Query: 197 AKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDE 256
AKRVAEE+GCRLGQEVGYTIRFEDCTS ET+IKYMTDGMLLRECL++ +L +YSVIMLDE
Sbjct: 648 AKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDE 707
Query: 257 AHERTIHTDVLFDPTKLSKFKK 278
AHERTIHTDVLF K + K+
Sbjct: 708 AHERTIHTDVLFGLLKTAVQKR 729
Score = 487 (176.5 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 97/100 (97%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ AP GSRKVVIATNI
Sbjct: 803 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNI 862
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ
Sbjct: 863 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 902
Score = 234 (87.4 bits), Expect = 5.9e-98, Sum P(2) = 5.9e-98
Identities = 47/48 (97%), Positives = 48/48 (100%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ
Sbjct: 855 KVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 902
Score = 173 (66.0 bits), Expect = 1.6e-91, Sum P(2) = 1.6e-91
Identities = 32/32 (100%), Positives = 32/32 (100%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV 300
DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV
Sbjct: 1206 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV 1237
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 745 (267.3 bits), Expect = 5.1e-94, Sum P(2) = 5.1e-94
Identities = 143/205 (69%), Positives = 168/205 (81%)
Query: 74 FYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQ 133
F + D G V + + + + + D+PEWKKH GG K+S+GKKT L+I+EQR+
Sbjct: 452 FEICDNGLVSSLMDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRE 511
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
SLPI++LK +LI+AV DNQILIVIGETGSGKTTQITQYLAEAG+T+RGKIGCTQPRRVAA
Sbjct: 512 SLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 571
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
MSVAKRV+EEFGC LGQEVGYTIRFEDCTS ET+IKYMTDGMLLRECL+D DL Y++IM
Sbjct: 572 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 631
Query: 254 LDEAHERTIHTDVLFDPTKLSKFKK 278
LDEAHERTIHTDVLF K + K+
Sbjct: 632 LDEAHERTIHTDVLFGLLKKTVQKR 656
Score = 484 (175.4 bits), Expect = 6.7e-58, Sum P(2) = 6.7e-58
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 730 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 789
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 790 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 829
Score = 223 (83.6 bits), Expect = 5.1e-94, Sum P(2) = 5.1e-94
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 782 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 829
Score = 151 (58.2 bits), Expect = 2.0e-86, Sum P(2) = 2.0e-86
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1133 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1163
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 741 (265.9 bits), Expect = 2.3e-93, Sum P(2) = 2.3e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 526 DIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 585
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 586 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 645
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 646 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 700
Score = 484 (175.4 bits), Expect = 7.9e-58, Sum P(2) = 7.9e-58
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 774 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 833
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 834 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 873
Score = 223 (83.6 bits), Expect = 2.3e-93, Sum P(2) = 2.3e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 826 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 873
Score = 151 (58.2 bits), Expect = 9.1e-86, Sum P(2) = 9.1e-86
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1177 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1207
Score = 41 (19.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 256 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 310
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 311 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 362
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 363 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 402
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 741 (265.9 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 530 DIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 589
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 590 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 649
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 650 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 704
Score = 484 (175.4 bits), Expect = 8.0e-58, Sum P(2) = 8.0e-58
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 778 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 837
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 838 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 877
Score = 223 (83.6 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 830 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 877
Score = 151 (58.2 bits), Expect = 9.5e-86, Sum P(2) = 9.5e-86
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1181 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1211
Score = 41 (19.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 260 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 314
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 315 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 366
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 367 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 406
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 741 (265.9 bits), Expect = 2.7e-93, Sum P(2) = 2.7e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 544 DIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 603
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 604 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 663
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 664 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 718
Score = 484 (175.4 bits), Expect = 8.4e-58, Sum P(2) = 8.4e-58
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 792 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 851
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 852 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 891
Score = 223 (83.6 bits), Expect = 2.7e-93, Sum P(2) = 2.7e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 844 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 891
Score = 151 (58.2 bits), Expect = 1.1e-85, Sum P(2) = 1.1e-85
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1195 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1225
Score = 41 (19.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 274 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 328
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 329 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 380
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 381 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 420
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 739 (265.2 bits), Expect = 2.8e-93, Sum P(2) = 2.8e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 534 DIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 593
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 594 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 653
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 654 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
Score = 484 (175.4 bits), Expect = 6.0e-45, P = 6.0e-45
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 782 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 841
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 842 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Score = 223 (83.6 bits), Expect = 2.8e-93, Sum P(2) = 2.8e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 834 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Score = 41 (19.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 264 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 318
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 319 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 370
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 371 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 410
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 739 (265.2 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 503 DIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 562
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 563 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 622
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 623 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 677
Score = 484 (175.4 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 751 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 810
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 811 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 850
Score = 223 (83.6 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 803 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 850
Score = 90 (36.7 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYE 290
DPTKLSK KK QRLEPLYN+ E
Sbjct: 1154 DPTKLSKQKKQQRLEPLYNRGE 1175
Score = 41 (19.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 233 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 287
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 288 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 339
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 340 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 379
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 739 (265.2 bits), Expect = 4.2e-93, Sum P(2) = 4.2e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 534 DIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 593
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 594 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 653
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 654 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
Score = 484 (175.4 bits), Expect = 8.1e-58, Sum P(2) = 8.1e-58
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 782 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 841
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 842 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Score = 223 (83.6 bits), Expect = 4.2e-93, Sum P(2) = 4.2e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 834 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Score = 151 (58.2 bits), Expect = 1.6e-85, Sum P(2) = 1.6e-85
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1185 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1215
Score = 41 (19.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 264 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 318
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 319 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 370
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 371 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 410
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 738 (264.8 bits), Expect = 4.9e-93, Sum P(2) = 4.9e-93
Identities = 140/175 (80%), Positives = 157/175 (89%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT L+I+EQR+SLPIYKLK +LI+AV DNQILIVIGETGSG
Sbjct: 524 DIPEWKKHAFGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSG 583
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T RGKIGCTQPRRVAAMSVAKRV+EE+GC LGQEVGYTIRFEDCTS
Sbjct: 584 KTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTS 643
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 644 PETVIKYMTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 698
Score = 484 (175.4 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 772 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 831
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 832 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 871
Score = 223 (83.6 bits), Expect = 4.9e-93, Sum P(2) = 4.9e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 824 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 871
Score = 148 (57.2 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPT+LSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1175 DPTRLSKQKKQQRLEPLYNRYEEPNAWRISR 1205
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 739 (265.2 bits), Expect = 5.1e-93, Sum P(2) = 5.1e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 556 DIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 615
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 616 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 675
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 676 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 730
Score = 484 (175.4 bits), Expect = 8.7e-58, Sum P(2) = 8.7e-58
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 804 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 863
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 864 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 903
Score = 223 (83.6 bits), Expect = 5.1e-93, Sum P(2) = 5.1e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 856 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 903
Score = 151 (58.2 bits), Expect = 2.0e-85, Sum P(2) = 2.0e-85
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1207 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1237
Score = 41 (19.5 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 286 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 340
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 341 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 392
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 393 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 432
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 739 (265.2 bits), Expect = 5.2e-93, Sum P(2) = 5.2e-93
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT ++I+EQR+SLPIYKLK +L++AV DNQILIVIGETGSG
Sbjct: 558 DIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 617
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 618 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 677
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 678 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 732
Score = 484 (175.4 bits), Expect = 8.8e-58, Sum P(2) = 8.8e-58
Identities = 95/100 (95%), Positives = 98/100 (98%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF+ APPGSRKVVIATNI
Sbjct: 806 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI 865
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 866 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 905
Score = 223 (83.6 bits), Expect = 5.2e-93, Sum P(2) = 5.2e-93
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQKVYNSKTG+D LVVTPISQ
Sbjct: 858 KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 905
Score = 151 (58.2 bits), Expect = 2.0e-85, Sum P(2) = 2.0e-85
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTKLSK KK QRLEPLYN+YEEPNAWRISR
Sbjct: 1209 DPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1239
Score = 41 (19.5 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 157 IGETGSGKTTQITQY---LAEAGFTAR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
IG+ +GK T I Q+ + G R G + ++ RR ++ V + GQ
Sbjct: 288 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSK-----GQR 342
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD-P 270
V ++ T ++T + M D + +E DL+ N ++ E +E T + D P
Sbjct: 343 V--KVKVLSFTGTKTSLS-MKD--VDQETGEDLNPNRRRNLV-GETNEETSMRNP--DRP 394
Query: 271 TKLSKFK----KNQRLE-PLYNKYEEPNAWRISRVVIATNI 306
T LS ++ LE + +P W I ++ IA N+
Sbjct: 395 THLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQM-IAANV 434
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 676 (243.0 bits), Expect = 2.4e-86, Sum P(2) = 2.4e-86
Identities = 125/176 (71%), Positives = 153/176 (86%)
Query: 103 QDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGS 162
+++PEW KHV G K+++G++TNL++VEQR+SLPI+ LK L++A+ DNQIL+V+GETGS
Sbjct: 508 KEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGS 567
Query: 163 GKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCT 222
GKTTQ+TQY EAG RGKIGCTQPRRVAAMSVAKRVAEE+GC+LG +VGYTIRFEDCT
Sbjct: 568 GKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCT 627
Query: 223 SSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
S +T+IKYMTDGMLLRECL+D DL+ YS+IMLDEAHERTIHTDVLF K + K+
Sbjct: 628 SQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
Score = 463 (168.0 bits), Expect = 3.2e-52, Sum P(2) = 3.2e-52
Identities = 89/100 (89%), Positives = 95/100 (95%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+ AP G RKVVIATNI
Sbjct: 757 GQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNI 816
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGIFYVVDPGFVKQK+YN K+GMDSLVVTPISQ
Sbjct: 817 AETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 224 (83.9 bits), Expect = 2.4e-86, Sum P(2) = 2.4e-86
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGIFYVVDPGFVKQK+YN K+GMDSLVVTPISQ
Sbjct: 809 KVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 119 (46.9 bits), Expect = 2.9e-75, Sum P(2) = 2.9e-75
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV 300
D TKLS FK+NQ+++PL++KY + NAWRI+RV
Sbjct: 1160 DSTKLSTFKRNQKIDPLFDKYADANAWRITRV 1191
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 676 (243.0 bits), Expect = 2.4e-86, Sum P(2) = 2.4e-86
Identities = 125/176 (71%), Positives = 153/176 (86%)
Query: 103 QDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGS 162
+++PEW KHV G K+++G++TNL++VEQR+SLPI+ LK L++A+ DNQIL+V+GETGS
Sbjct: 508 KEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGS 567
Query: 163 GKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCT 222
GKTTQ+TQY EAG RGKIGCTQPRRVAAMSVAKRVAEE+GC+LG +VGYTIRFEDCT
Sbjct: 568 GKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCT 627
Query: 223 SSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
S +T+IKYMTDGMLLRECL+D DL+ YS+IMLDEAHERTIHTDVLF K + K+
Sbjct: 628 SQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
Score = 463 (168.0 bits), Expect = 3.2e-52, Sum P(2) = 3.2e-52
Identities = 89/100 (89%), Positives = 95/100 (95%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+ AP G RKVVIATNI
Sbjct: 757 GQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNI 816
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGIFYVVDPGFVKQK+YN K+GMDSLVVTPISQ
Sbjct: 817 AETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 224 (83.9 bits), Expect = 2.4e-86, Sum P(2) = 2.4e-86
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGIFYVVDPGFVKQK+YN K+GMDSLVVTPISQ
Sbjct: 809 KVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 119 (46.9 bits), Expect = 2.9e-75, Sum P(2) = 2.9e-75
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRV 300
D TKLS FK+NQ+++PL++KY + NAWRI+RV
Sbjct: 1160 DSTKLSTFKRNQKIDPLFDKYADANAWRITRV 1191
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 685 (246.2 bits), Expect = 1.4e-84, Sum P(2) = 1.4e-84
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKK G K +FG+++ L+I EQR+SLPIYKLK ELI+AV DNQ+L+VIGETGSG
Sbjct: 485 DMPEWKKDAFG-KTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSG 543
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQ+TQYLAEAG+T +GKIGCTQPRRVAAMSVAKRVAEEFGCRLG+EVGY IRFEDCT
Sbjct: 544 KTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 603
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
+T+IKYMTDGMLLRE L+D +L+ YSVIMLDEAHERTIHTDVLF K L K + + RL
Sbjct: 604 PDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRL 663
Score = 415 (151.1 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
Identities = 79/100 (79%), Positives = 89/100 (89%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEID+AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF+ PPG RKVV+ATNI
Sbjct: 732 GQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNI 791
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AE SLTIDGI+YVVDPGF KQ VYN K G++SLV+TPISQ
Sbjct: 792 AEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 831
Score = 197 (74.4 bits), Expect = 1.4e-84, Sum P(2) = 1.4e-84
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAE SLTIDGI+YVVDPGF KQ VYN K G++SLV+TPISQ
Sbjct: 784 KVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 831
Score = 123 (48.4 bits), Expect = 8.8e-77, Sum P(2) = 8.8e-77
Identities = 19/31 (61%), Positives = 28/31 (90%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DPTK+SK K+ +R+EPLY++Y EPN+WR+S+
Sbjct: 1135 DPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1165
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 628 (226.1 bits), Expect = 4.0e-78, Sum P(2) = 4.0e-78
Identities = 121/167 (72%), Positives = 140/167 (83%)
Query: 102 SQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETG 161
S+ +PEW++ I K SFGK+TN+TI +QR+SLP++ + +LIKAV +NQI+IV+GETG
Sbjct: 510 SEAVPEWRQ-AIAPKNQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIVVGETG 568
Query: 162 SGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDC 221
SGKTTQ+TQYLAEAGF G IGCTQPRRVAAMSVAKRV+EE GC LGQEVGYTIRFEDC
Sbjct: 569 SGKTTQLTQYLAEAGFANEGVIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDC 628
Query: 222 TSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
TS T IKYMTDGML RE ++D DL YSVIMLDEAHERTI TDVLF
Sbjct: 629 TSPATRIKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLF 675
Score = 434 (157.8 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 84/100 (84%), Positives = 93/100 (93%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDT+CEIL+ERMK+LGP VPELIILPVYSALP+EMQ+RIF+ APPGSRKVVIATNI
Sbjct: 759 GQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNI 818
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID I+YVVDPGFVKQ Y+ K GMDSLVVTPISQ
Sbjct: 819 AETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQ 858
Score = 196 (74.1 bits), Expect = 4.0e-78, Sum P(2) = 4.0e-78
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETS+TID I+YVVDPGFVKQ Y+ K GMDSLVVTPISQ
Sbjct: 811 KVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQ 858
Score = 89 (36.4 bits), Expect = 7.5e-67, Sum P(2) = 7.5e-67
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 272 KLSKFKKNQRLEPLYNKYEEPNAWRIS 298
KLSK ++ +R++PLYNK+E N WR+S
Sbjct: 1165 KLSKRRQQERIQPLYNKFEGENDWRLS 1191
Score = 37 (18.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
M+ E A ++L+ +K P+L I+ + L ++ + F P
Sbjct: 660 MLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECP 710
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 621 (223.7 bits), Expect = 4.1e-78, Sum P(2) = 4.1e-78
Identities = 119/168 (70%), Positives = 144/168 (85%)
Query: 101 ISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGET 160
I ++PEWKK V G +GK T+ +I EQR+SLPI+ L+ ++AVS++Q+L+VIGET
Sbjct: 475 IDTEIPEWKK-VTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGET 533
Query: 161 GSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFED 220
GSGKTTQ+ QYLAEAG+ RGKIGCTQPRRVAAMSV+KRVAEEFGC+LGQEVGY IRFED
Sbjct: 534 GSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFED 593
Query: 221 CTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
CTS ET+IK+MTDG+LLRECL+D +L+ YSVI+LDEAHERTI TDVLF
Sbjct: 594 CTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLF 641
Score = 437 (158.9 bits), Expect = 7.2e-49, Sum P(2) = 7.2e-49
Identities = 85/100 (85%), Positives = 92/100 (92%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEID AC+ILYERMKSLG +VP+LIILPVYSALPSEMQT+IFE APPGSRKVVIATNI
Sbjct: 725 GQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNI 784
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YV+DPGF KQK +N K GMDSLVV PISQ
Sbjct: 785 AETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQ 824
Score = 202 (76.2 bits), Expect = 4.1e-78, Sum P(2) = 4.1e-78
Identities = 42/62 (67%), Positives = 47/62 (75%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
+ K EP +VVIATNIAETSLTIDGI+YV+DPGF KQK +N K GMDSLVV PI
Sbjct: 763 MQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPI 822
Query: 345 SQ 346
SQ
Sbjct: 823 SQ 824
Score = 113 (44.8 bits), Expect = 9.8e-69, Sum P(2) = 9.8e-69
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
DP K+SK K+ +++EPLY+KY +PNAWR S+
Sbjct: 1128 DPNKISKRKRKEKIEPLYDKYNDPNAWRPSK 1158
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 139/175 (79%), Positives = 158/175 (90%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKKH GG K+S+GKKT L+I+EQR+SLPI++LK +LI+AV DNQILIVIGETGSG
Sbjct: 444 DIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSG 503
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQITQYLAEAG+T+RGKIGCTQPRRVAAMSVAKRV+EEFGC LGQEVGYTIRFEDCTS
Sbjct: 504 KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 563
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
ET+IKYMTDGMLLRECL+D DL Y++IMLDEAHERTIHTDVLF K + K+
Sbjct: 564 PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 618
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 574 (207.1 bits), Expect = 8.9e-73, Sum P(2) = 8.9e-73
Identities = 114/179 (63%), Positives = 142/179 (79%)
Query: 101 ISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGET 160
++ + P W++ S+GK+T L++ EQR+ LP++KL+ + ++AVS NQIL+++GET
Sbjct: 477 LTSETPSWRQ-ATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGET 535
Query: 161 GSGKTTQITQYLAEAGFTARGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFE 219
GSGKTTQITQYLAE G+T+ K IGCTQPRRVAAMSVAKRVAEE GCR+G+EVGYTIRFE
Sbjct: 536 GSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFE 595
Query: 220 DCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
D TS T IKYMTDGML RECLVD L+ YSVI+LDEAHERT+ TDVLF K + K+
Sbjct: 596 DKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKR 654
Score = 422 (153.6 bits), Expect = 6.1e-45, Sum P(2) = 6.1e-45
Identities = 81/100 (81%), Positives = 90/100 (90%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDT+CEILYER K LG +PEL+ILPVYSALPSE+Q+RIFE APPG RKVVIATNI
Sbjct: 728 GQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNI 787
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI+YVVDPGFVKQ ++ K GMDSL+VTPISQ
Sbjct: 788 AETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Score = 200 (75.5 bits), Expect = 8.9e-73, Sum P(2) = 8.9e-73
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVIATNIAETSLTIDGI+YVVDPGFVKQ ++ K GMDSL+VTPISQ
Sbjct: 780 KVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Score = 91 (37.1 bits), Expect = 2.7e-61, Sum P(2) = 2.7e-61
Identities = 15/28 (53%), Positives = 24/28 (85%)
Query: 272 KLSKFKKNQRLEPLYNKYEEPNAWRISR 299
++SK KKN ++ PLYN++E+P+ WRIS+
Sbjct: 1135 QVSKTKKNLKVLPLYNRFEKPDEWRISK 1162
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 579 (208.9 bits), Expect = 6.4e-70, Sum P(2) = 6.4e-70
Identities = 112/165 (67%), Positives = 132/165 (80%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKK+ S G K L I EQR LPIY LK++L+KA+ N +LIVIGETGSG
Sbjct: 601 DIPEWKKNY-NNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSG 659
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQI QYL EA +T +G +GCTQPRRVAAMS+AKRV+EEFGC LGQEVGY+IRF+DCTS
Sbjct: 660 KTTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTS 719
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
++T+IKY+TDGMLLRE L D L YS I+LDEAHERTI TD+LF
Sbjct: 720 NDTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILF 764
Score = 353 (129.3 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 70/101 (69%), Positives = 83/101 (82%)
Query: 4 GQEEIDTACEILYERMKSL-GPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
GQ+EI+TACEIL+ERMK L P LIILP+YS+LPSEMQ+ IFE APPG RK ++ATN
Sbjct: 848 GQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATN 907
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAE SLTIDGIF+V+DPGF K K Y+SK MDSL+V PIS+
Sbjct: 908 IAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISK 948
Score = 170 (64.9 bits), Expect = 6.4e-70, Sum P(2) = 6.4e-70
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
EP + ++ATNIAE SLTIDGIF+V+DPGF K K Y+SK MDSL+V PIS+
Sbjct: 893 EPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISK 948
Score = 112 (44.5 bits), Expect = 8.3e-64, Sum P(2) = 8.3e-64
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
D K+SK K +++EPL+N YEEPNAWR+SR
Sbjct: 1257 DEKKISKIKLREKIEPLHNYYEEPNAWRLSR 1287
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 579 (208.9 bits), Expect = 6.4e-70, Sum P(2) = 6.4e-70
Identities = 112/165 (67%), Positives = 132/165 (80%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSG 163
D+PEWKK+ S G K L I EQR LPIY LK++L+KA+ N +LIVIGETGSG
Sbjct: 601 DIPEWKKNY-NNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSG 659
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS 223
KTTQI QYL EA +T +G +GCTQPRRVAAMS+AKRV+EEFGC LGQEVGY+IRF+DCTS
Sbjct: 660 KTTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTS 719
Query: 224 SETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
++T+IKY+TDGMLLRE L D L YS I+LDEAHERTI TD+LF
Sbjct: 720 NDTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILF 764
Score = 353 (129.3 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 70/101 (69%), Positives = 83/101 (82%)
Query: 4 GQEEIDTACEILYERMKSL-GPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
GQ+EI+TACEIL+ERMK L P LIILP+YS+LPSEMQ+ IFE APPG RK ++ATN
Sbjct: 848 GQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATN 907
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAE SLTIDGIF+V+DPGF K K Y+SK MDSL+V PIS+
Sbjct: 908 IAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISK 948
Score = 170 (64.9 bits), Expect = 6.4e-70, Sum P(2) = 6.4e-70
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
EP + ++ATNIAE SLTIDGIF+V+DPGF K K Y+SK MDSL+V PIS+
Sbjct: 893 EPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISK 948
Score = 112 (44.5 bits), Expect = 8.3e-64, Sum P(2) = 8.3e-64
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
D K+SK K +++EPL+N YEEPNAWR+SR
Sbjct: 1257 DEKKISKIKLREKIEPLHNYYEEPNAWRLSR 1287
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 534 (193.0 bits), Expect = 1.7e-69, Sum P(3) = 1.7e-69
Identities = 102/169 (60%), Positives = 136/169 (80%)
Query: 116 KKSSFGKKTNLT-IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
K +KT L + E R+SLPIY + +L+KAV ++Q+L+++G+TGSGKTTQI QYL E
Sbjct: 384 KSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHE 443
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
AG+T RGK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCTS +T++KYMTDG
Sbjct: 444 AGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDG 503
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
MLLRE L + DL +YSV+++DEAHERT+ TD+LF K +++F+ + +L
Sbjct: 504 MLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKL 552
Score = 342 (125.4 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 67/100 (67%), Positives = 82/100 (82%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+TA EIL R++ LG + ELII P+Y+ LPSE+Q +IFE P G+RKVV+ATNI
Sbjct: 621 GQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNI 680
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI YVVDPGF K K YN +TGM+SL++TPIS+
Sbjct: 681 AETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISK 720
Score = 192 (72.6 bits), Expect = 1.7e-69, Sum P(3) = 1.7e-69
Identities = 40/62 (64%), Positives = 47/62 (75%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K EP +VV+ATNIAETSLTIDGI YVVDPGF K K YN +TGM+SL++TPI
Sbjct: 659 LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPI 718
Query: 345 SQ 346
S+
Sbjct: 719 SK 720
Score = 37 (18.1 bits), Expect = 1.7e-69, Sum P(3) = 1.7e-69
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 108 WKKHVIGGKKSSFGKK 123
W+ H IG FG K
Sbjct: 331 WEDHQIGKATLKFGAK 346
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 537 (194.1 bits), Expect = 4.1e-69, Sum P(2) = 4.1e-69
Identities = 102/161 (63%), Positives = 132/161 (81%)
Query: 123 KTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
+ +TI E R+SLP+Y + +LI AV + Q+LI++GETGSGKTTQI QYL EAGF+ GK
Sbjct: 455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK 514
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
IGCTQPRRVAAMSVA RVAEE GC+LG EVGY+IRFEDCTS +T+++YMTDGML+RE L
Sbjct: 515 IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLT 574
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
DL +YSV+++DEAHERT+HTD+LF K +++F+ + +L
Sbjct: 575 APDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKL 615
Score = 340 (124.7 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 62/100 (62%), Positives = 81/100 (81%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEE+D A E+L R + LG + ELII +YS LP+++Q +IFE PP +RKVV+ATNI
Sbjct: 684 GQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNI 743
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI YV+DPGF KQK++N +TGM+SLV+TP+S+
Sbjct: 744 AETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSR 783
Score = 202 (76.2 bits), Expect = 4.1e-69, Sum P(2) = 4.1e-69
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K EP +VV+ATNIAETSLTIDGI YV+DPGF KQK++N +TGM+SLV+TP+
Sbjct: 722 LQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPV 781
Query: 345 SQ 346
S+
Sbjct: 782 SR 783
Score = 44 (20.5 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 13 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSRKVVIATNIAE 65
+IL+ +K + P+L +L + + +E + F+ AP PG RK + T+ +
Sbjct: 597 DILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPG-RKYEVTTHYTQ 652
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 532 (192.3 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 109/183 (59%), Positives = 135/183 (73%)
Query: 105 LPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGK 164
+ +WKK K +FGK+T+L I EQR+ LP+Y ++ +L++A+ DNQ ++++GETGSGK
Sbjct: 309 ISKWKK---SNKTETFGKRTSLPIQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGK 365
Query: 165 TTQITQYLAEAGFTARGK----IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFED 220
TTQI QY+ E G G IGCTQPRRVAA SVAKRV+EE GC+LG VGYTIRFED
Sbjct: 366 TTQIVQYIYEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFED 425
Query: 221 CTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQ 280
TS T+IKYMTDGML RE L D ++N YSVIMLDEAHERTI TDVLF K + K+N
Sbjct: 426 VTSENTVIKYMTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLK-NAAKQNP 484
Query: 281 RLE 283
L+
Sbjct: 485 NLK 487
Score = 411 (149.7 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 79/100 (79%), Positives = 91/100 (91%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+T+CE L+ERMK LG ++PELIILPVYSALPSEMQTRIFE PPGSRKV++ATNI
Sbjct: 557 GQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNI 616
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TIDGI+YVVDPGFVK +Y+SK GMDSL VTPIS+
Sbjct: 617 AETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISK 656
Score = 190 (71.9 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
EP +V++ATNIAETS+TIDGI+YVVDPGFVK +Y+SK GMDSL VTPIS+
Sbjct: 601 EPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISK 656
Score = 58 (25.5 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRIS 298
D + + KK Q++ PL+++ ++ N WR+S
Sbjct: 960 DAKTVQEIKKKQKIVPLFSRQKKDN-WRLS 988
Score = 46 (21.3 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
M+ E A ++L+ +K+ P L ++ + L S +R F P
Sbjct: 458 MLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCP 508
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 525 (189.9 bits), Expect = 5.2e-67, Sum P(2) = 5.2e-67
Identities = 104/180 (57%), Positives = 136/180 (75%)
Query: 93 MDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQ 152
+D + + ++ D E + H + S+ GK + E R++LPIY + +L+ AV D+Q
Sbjct: 363 IDFIKASVLAGDNYEDEMHAKPSQDSA-GKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQ 421
Query: 153 ILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEV 212
+LI++GETGSGKTTQI QYL EAG+T GK+GCTQPRRVAAMSVA RVA+E G +LG EV
Sbjct: 422 VLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEV 481
Query: 213 GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
GY+IRFEDCTS +T++KYMTDGMLLRE L + DL +YSVI++DEAHERT+ TD+LF K
Sbjct: 482 GYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVK 541
Score = 324 (119.1 bits), Expect = 6.2e-28, P = 6.2e-28
Identities = 64/100 (64%), Positives = 79/100 (79%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ E L +++ LG + ELII P+Y+ LPSE+Q +IFE P G+RKVV+ATNI
Sbjct: 621 GQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNI 680
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI YVVDPGF K K YN +TGM+SL+VTPIS+
Sbjct: 681 AETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISK 720
Score = 193 (73.0 bits), Expect = 5.2e-67, Sum P(2) = 5.2e-67
Identities = 41/62 (66%), Positives = 47/62 (75%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K EP +VV+ATNIAETSLTIDGI YVVDPGF K K YN +TGM+SL+VTPI
Sbjct: 659 LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPI 718
Query: 345 SQ 346
S+
Sbjct: 719 SK 720
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 635 (228.6 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 126/185 (68%), Positives = 152/185 (82%)
Query: 99 TPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIG 158
T + +PEWK+ V GK SFGK+TN++I +QR+SLP+YK + +L++AV++NQ+LIV+G
Sbjct: 542 TGTDEAVPEWKR-VTMGKTPSFGKRTNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVG 600
Query: 159 ETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRF 218
+TGSGKTTQ+TQYLAEAG+ +G IGCTQPRRVAAMSVAKRVAEE GC+LG EVGYTIRF
Sbjct: 601 DTGSGKTTQVTQYLAEAGWANKGIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRF 660
Query: 219 EDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLS-KFK 277
EDCTS ET IKYMTDGML RE L+D DL YSVIMLDEAHERTI TDVLF K + K +
Sbjct: 661 EDCTSPETKIKYMTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRR 720
Query: 278 KNQRL 282
+ RL
Sbjct: 721 PDLRL 725
Score = 445 (161.7 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 85/100 (85%), Positives = 93/100 (93%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEIDTACEILYERMK+LGP VPEL+ILPVYSALPSEMQ+RIF+ APPG RKVVIATNI
Sbjct: 794 GQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNI 853
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID I+YV+DPGFVKQK Y+ K GMDSLVVTPISQ
Sbjct: 854 AETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQ 893
Score = 206 (77.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 62/161 (38%), Positives = 83/161 (51%)
Query: 197 AKRVAEEF-GCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL-DLNNYSVIML 254
A + +E F GC + G T E S E Y+ D L+ + L + ++ L
Sbjct: 734 ADKFSEYFYGCPIFSIPGRTFPVEIMYSKEPESDYL-DAALITVMQIHLTEPPGDMLLFL 792
Query: 255 DEAHERTIHTDVLFDPTK-LSKFKKNQRLEPLYNKYEEPNAWRI--------SRVVIATN 305
E ++L++ K L + P+Y+ RI +VVIATN
Sbjct: 793 TGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATN 852
Query: 306 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
IAETS+TID I+YV+DPGFVKQK Y+ K GMDSLVVTPISQ
Sbjct: 853 IAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQ 893
Score = 75 (31.5 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 270 PT-KLSKFKKNQRLEPLYNKYEEPNAWRIS 298
PT +LSK KK +R++PL+N++ + WR+S
Sbjct: 1197 PTDRLSKRKKAERIQPLHNRFAGEDDWRLS 1226
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 493 (178.6 bits), Expect = 5.3e-66, Sum P(3) = 5.3e-66
Identities = 93/141 (65%), Positives = 117/141 (82%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGC 185
TI + R+ LPIY+ + ++I+AV D+Q+LI++GETGSGKTTQ+ QYL EAG+T G K+GC
Sbjct: 473 TIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGC 532
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAAMSVA RVAEE G +LG EVGY+IRFED TS +T++KYMTDGMLLRE L + D
Sbjct: 533 TQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPD 592
Query: 246 LNNYSVIMLDEAHERTIHTDV 266
L YS +M+DEAHERT+ TD+
Sbjct: 593 LGQYSALMIDEAHERTVPTDI 613
Score = 334 (122.6 bits), Expect = 6.0e-29, P = 6.0e-29
Identities = 63/100 (63%), Positives = 81/100 (81%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ A + L E + LG +PE+II P+Y+ LPS++Q +IFE PP +RKVV+ATNI
Sbjct: 699 GQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNI 758
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI YV+DPGFVK+ V+N +TGM+SLVVTP S+
Sbjct: 759 AETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSR 798
Score = 200 (75.5 bits), Expect = 5.3e-66, Sum P(3) = 5.3e-66
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K EP + +VV+ATNIAETSLTIDGI YV+DPGFVK+ V+N +TGM+SLVVTP
Sbjct: 737 LQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPC 796
Query: 345 SQ 346
S+
Sbjct: 797 SR 798
Score = 41 (19.5 bits), Expect = 5.3e-66, Sum P(3) = 5.3e-66
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 4 GQEEIDTACEILYERM 19
G EE+ + C LY+R+
Sbjct: 50 GAEEVSSFCSELYKRV 65
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 509 (184.2 bits), Expect = 8.9e-66, Sum P(2) = 8.9e-66
Identities = 100/166 (60%), Positives = 130/166 (78%)
Query: 119 SFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
S +K +I E R+SLPI+ + +L+ A+ D+QIL++ GETGSGKTTQI QYL E G+T
Sbjct: 396 SQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYT 455
Query: 179 ARG-KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
G KIGCTQPRRVAAMSVA RVA+E +LG EVGY+IRFEDCTS T++KYMTDGMLL
Sbjct: 456 KGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLL 515
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
RE L + DL +YSVI++DEAHERT+HTD+LF K +++F+ + ++
Sbjct: 516 REFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKV 561
Score = 365 (133.5 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 66/100 (66%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ CE+L ER + LG + EL++LP+Y+ LPS+MQ +IF PPG+RKVV+ATNI
Sbjct: 630 GQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNI 689
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI YV+DPGF KQK YN+KTGM+SL+VTP S+
Sbjct: 690 AETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSR 729
Score = 198 (74.8 bits), Expect = 8.9e-66, Sum P(2) = 8.9e-66
Identities = 37/48 (77%), Positives = 44/48 (91%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTIDGI YV+DPGF KQK YN+KTGM+SL+VTP S+
Sbjct: 682 KVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSR 729
Score = 47 (21.6 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 13 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
+IL+ +K + P+L +L + L +E + F+ AP PG R
Sbjct: 543 DILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRR 589
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 513 (185.6 bits), Expect = 2.4e-65, Sum P(2) = 2.4e-65
Identities = 101/163 (61%), Positives = 128/163 (78%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
++ LT+ E R+SLP+Y K +LI AV ++Q+LI+ GETGSGKTTQ+ QYL EAGFT
Sbjct: 239 ERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDK 298
Query: 182 K-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLREC 240
K IGCTQPRRVAAMSVA RVAEE G +LG EVGY+IRFEDCTS T++KYMTDG L RE
Sbjct: 299 KMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREF 358
Query: 241 LVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L + DL +YSV+++DEAHERT+HTD+LF K +++F+ +L
Sbjct: 359 LSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKL 401
Score = 341 (125.1 bits), Expect = 7.0e-30, P = 7.0e-30
Identities = 62/100 (62%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQ+EI+T E+L++R+K LG + ELI++PVY+ LPS+MQ +IFE PP +RKV++ATNI
Sbjct: 470 GQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNI 529
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTID I YV+DPGF KQ +NS+TGM+SL+V PIS+
Sbjct: 530 AETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISK 569
Score = 185 (70.2 bits), Expect = 2.4e-65, Sum P(2) = 2.4e-65
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
K EP +V++ATNIAETSLTID I YV+DPGF KQ +NS+TGM+SL+V PIS+
Sbjct: 511 KIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISK 569
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 521 (188.5 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 102/151 (67%), Positives = 124/151 (82%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 56 SEFAKKKS--ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY 113
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 114 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILL 173
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS I++DEAHER+++TDVLF
Sbjct: 174 RESLREADLDHYSAIIMDEAHERSLNTDVLF 204
Score = 278 (102.9 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 51/100 (51%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 288 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 346
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 347 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 386
Score = 159 (61.0 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 337 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 386
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 494 (179.0 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 95/163 (58%), Positives = 129/163 (79%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
+K L++ E R+SLPIY + E + A+ QIL+++GETGSGKTTQ+ QYL EAG+T G
Sbjct: 360 EKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDG 419
Query: 182 -KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLREC 240
++GCTQPRRVAAMSVA RVA+E G ++G EVGY+IRFED TS +T++KYMTDGMLLRE
Sbjct: 420 MRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREF 479
Query: 241 LVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
+ + DL++YS +M+DEAHERT+HTD+L K L++ +K+ +L
Sbjct: 480 MTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKL 522
Score = 303 (111.7 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 59/100 (59%), Positives = 76/100 (76%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQ+EI+ A + E + LG V EL+I P+Y+ LPSE+Q++IFE P +RKVV+ATNI
Sbjct: 591 GQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNI 650
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI YV+DPG+VK+ VYN TGM +LVV P S+
Sbjct: 651 AETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSR 690
Score = 190 (71.9 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 38/62 (61%), Positives = 46/62 (74%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L +K EP +VV+ATNIAETSLTIDGI YV+DPG+VK+ VYN TGM +LVV P
Sbjct: 629 LQSKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPC 688
Query: 345 SQ 346
S+
Sbjct: 689 SR 690
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 498 (180.4 bits), Expect = 3.9e-63, Sum P(2) = 3.9e-63
Identities = 95/148 (64%), Positives = 122/148 (82%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ A++D+Q+LI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 397 RRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRR 456
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 457 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 516
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 517 VVMVDEAHERTLHTDILFGLIKDVARFR 544
Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 618 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 677
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 678 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 717
Score = 184 (69.8 bits), Expect = 3.9e-63, Sum P(2) = 3.9e-63
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 670 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 717
Score = 45 (20.9 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + L + + F+ AP PG R
Sbjct: 519 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRR 577
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 528 (190.9 bits), Expect = 4.0e-63, Sum P(2) = 4.0e-63
Identities = 102/163 (62%), Positives = 133/163 (81%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
+K ++I E R+SLP+Y + I+AV ++Q+LI+ GETGSGKTTQ+ QYL EAGF G
Sbjct: 351 EKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGG 410
Query: 182 K-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLREC 240
K IGCTQPRRVAAMSVA RVA+E GC+LG +VGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 411 KRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREF 470
Query: 241 LVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L + DL +YSV+M+DEAHERT+HTD+LF K +++F+K+ +L
Sbjct: 471 LNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKL 513
Score = 292 (107.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 58/100 (58%), Positives = 77/100 (77%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFE P +RKVV+ATNI
Sbjct: 583 GQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNI 642
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TIDGI YV+DPGF KQ +++++G++ L V IS+
Sbjct: 643 AETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Score = 152 (58.6 bits), Expect = 4.0e-63, Sum P(2) = 4.0e-63
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K EP +VV+ATNIAETS+TIDGI YV+DPGF KQ +++++G++ L V I
Sbjct: 621 LQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTI 680
Query: 345 SQ 346
S+
Sbjct: 681 SK 682
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 528 (190.9 bits), Expect = 4.0e-63, Sum P(2) = 4.0e-63
Identities = 102/163 (62%), Positives = 133/163 (81%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
+K ++I E R+SLP+Y + I+AV ++Q+LI+ GETGSGKTTQ+ QYL EAGF G
Sbjct: 351 EKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGG 410
Query: 182 K-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLREC 240
K IGCTQPRRVAAMSVA RVA+E GC+LG +VGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 411 KRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREF 470
Query: 241 LVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L + DL +YSV+M+DEAHERT+HTD+LF K +++F+K+ +L
Sbjct: 471 LNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKL 513
Score = 292 (107.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 58/100 (58%), Positives = 77/100 (77%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFE P +RKVV+ATNI
Sbjct: 583 GQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNI 642
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TIDGI YV+DPGF KQ +++++G++ L V IS+
Sbjct: 643 AETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Score = 152 (58.6 bits), Expect = 4.0e-63, Sum P(2) = 4.0e-63
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K EP +VV+ATNIAETS+TIDGI YV+DPGF KQ +++++G++ L V I
Sbjct: 621 LQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTI 680
Query: 345 SQ 346
S+
Sbjct: 681 SK 682
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 495 (179.3 bits), Expect = 8.4e-63, Sum P(2) = 8.4e-63
Identities = 96/148 (64%), Positives = 122/148 (82%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ AV+++QILI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRR 459
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 519
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 520 VVMVDEAHERTLHTDILFGLIKDVARFR 547
Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 621 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 680
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 681 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 184 (69.8 bits), Expect = 8.4e-63, Sum P(2) = 8.4e-63
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 673 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 45 (20.9 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + L + + F+ AP PG R
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRR 580
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 495 (179.3 bits), Expect = 8.4e-63, Sum P(2) = 8.4e-63
Identities = 96/148 (64%), Positives = 122/148 (82%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ AV+++QILI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRR 459
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 519
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 520 VVMVDEAHERTLHTDILFGLIKDVARFR 547
Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 621 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 680
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 681 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 184 (69.8 bits), Expect = 8.4e-63, Sum P(2) = 8.4e-63
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 673 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 45 (20.9 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + L + + F+ AP PG R
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRR 580
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 521 (188.5 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 102/151 (67%), Positives = 124/151 (82%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 517 SEFAKKKS--ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY 574
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 575 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILL 634
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS I++DEAHER+++TDVLF
Sbjct: 635 RESLREADLDHYSAIIMDEAHERSLNTDVLF 665
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 51/100 (51%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 749 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 807
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 808 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
Score = 159 (61.0 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 798 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 521 (188.5 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 102/151 (67%), Positives = 124/151 (82%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 517 SEFAKKKS--ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY 574
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 575 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILL 634
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS I++DEAHER+++TDVLF
Sbjct: 635 RESLREADLDHYSAIIMDEAHERSLNTDVLF 665
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 51/100 (51%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 749 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 807
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 808 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
Score = 159 (61.0 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 798 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 493 (178.6 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 94/148 (63%), Positives = 122/148 (82%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ A++++Q+LI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 399 RRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRR 458
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 459 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 518
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 519 VVMVDEAHERTLHTDILFGLIKDVARFR 546
Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 620 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 679
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 680 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 719
Score = 184 (69.8 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 672 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 719
Score = 45 (20.9 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + L + + F+ AP PG R
Sbjct: 521 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRR 579
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 493 (178.6 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 94/148 (63%), Positives = 122/148 (82%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ A++++Q+LI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 400 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRR 459
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 519
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 520 VVMVDEAHERTLHTDILFGLIKDVARFR 547
Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 621 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 680
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 681 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 184 (69.8 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 673 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 45 (20.9 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + L + + F+ AP PG R
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRR 580
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 520 (188.1 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 101/151 (66%), Positives = 124/151 (82%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 516 SEFAKKKS--ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY 573
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 574 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILL 633
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS +++DEAHER+++TDVLF
Sbjct: 634 RESLREADLDHYSAVIMDEAHERSLNTDVLF 664
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 51/100 (51%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 748 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 806
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 807 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 846
Score = 159 (61.0 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 797 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 846
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 492 (178.3 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 94/148 (63%), Positives = 122/148 (82%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ A++++Q+LI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 515
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 516 VVMVDEAHERTLHTDILFGLIKDVARFR 543
Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 617 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 676
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 677 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 716
Score = 184 (69.8 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 669 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 716
Score = 43 (20.2 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + + + + F+ AP PG R
Sbjct: 518 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 576
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 517 (187.1 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 97/151 (64%), Positives = 125/151 (82%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK T++EQRQ LPI+ ++ +L+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 548 SDFAKKK--TLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGY 605
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T+ G +GCTQPRRVAAMSVAKRV+EE LG+EVGY IRFEDCTS +T+IKYMTDG+LL
Sbjct: 606 TSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILL 665
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS +++DEAHER+++TDVLF
Sbjct: 666 RESLRESDLDHYSAVIMDEAHERSLNTDVLF 696
Score = 283 (104.7 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 54/100 (54%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + ER+ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 780 GQEDIEVTSDQIVERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 838
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +VVD G+ K KV+N + GMD+L V PISQ
Sbjct: 839 AETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQ 878
Score = 161 (61.7 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +VVD G+ K KV+N + GMD+L V PISQ
Sbjct: 829 VRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQ 878
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 518 (187.4 bits), Expect = 2.7e-62, Sum P(2) = 2.7e-62
Identities = 101/151 (66%), Positives = 124/151 (82%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL + G+
Sbjct: 518 SEFAKKKS--ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGY 575
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 576 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILL 635
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS I++DEAHER+++TDVLF
Sbjct: 636 RESLREADLDHYSAIIMDEAHERSLNTDVLF 666
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 51/100 (51%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 750 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 808
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 809 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 848
Score = 159 (61.0 bits), Expect = 2.7e-62, Sum P(2) = 2.7e-62
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 799 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 848
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 505 (182.8 bits), Expect = 9.4e-62, Sum P(2) = 9.4e-62
Identities = 95/154 (61%), Positives = 124/154 (80%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
G KS F +K TI EQR+ LP++ + EL+ + +N ++I++GETGSGKTTQ+TQYL E
Sbjct: 516 GGKSDFSRKK--TISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHE 573
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
G++ RG IGCTQPRRVAAMSVAKRV++E +LG++VGY IRFEDCTS T+IKYMTDG
Sbjct: 574 DGYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDG 633
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
+LLRE L D +L++YS I++DEAHER++ TDVLF
Sbjct: 634 ILLRESLRDPELDSYSAIIMDEAHERSLSTDVLF 667
Score = 297 (109.6 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 56/100 (56%), Positives = 75/100 (75%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ CE+L ER+ + + P L ILP+YS LPS++Q +IF+ + G RK V+ATNI
Sbjct: 751 GQEDIEVTCEVLEERLAEID-NAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNI 809
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI YV+D G+ K KVYN + GMD+L + PISQ
Sbjct: 810 AETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQ 849
Score = 167 (63.8 bits), Expect = 9.4e-62, Sum P(2) = 9.4e-62
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + V+ATNIAETSLT+DGI YV+D G+ K KVYN + GMD+L + PISQ
Sbjct: 800 LRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQ 849
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 472 (171.2 bits), Expect = 9.9e-61, Sum P(2) = 9.9e-61
Identities = 100/182 (54%), Positives = 128/182 (70%)
Query: 94 DSLVVTPISQDLPEWKKHVIGGKKSSFGKK----TNLT----IVEQRQSLPIYKLKHELI 145
DS + P Q E K K S KK +N + I EQR+ LP + ++ +L+
Sbjct: 254 DSALPVPDDQAPAEVKAEKSDNKFSEHMKKNDGASNFSQTKSIREQREFLPAFAVREDLM 313
Query: 146 KAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFG 205
+ + DNQ++IV+GETGSGKTTQ+TQ+L E G+ G IGCTQPRRVAAMSVAKRV+EE
Sbjct: 314 RVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVAAMSVAKRVSEEME 373
Query: 206 CRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTD 265
+LG VGY IRFEDCTS +T+IKYMTDG+LLRE L + DL+ YS I++DEAHER ++TD
Sbjct: 374 VKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTD 433
Query: 266 VL 267
VL
Sbjct: 434 VL 435
Score = 325 (119.5 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 60/100 (60%), Positives = 80/100 (80%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ CE++ ER+ +L D P+L ILP+YS +P+++Q +IF+ APPG RK ++ATNI
Sbjct: 520 GQEDIEVTCELVRERLDALN-DPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNI 578
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI YVVD G+ K KVYN K GMD+L +TPISQ
Sbjct: 579 AETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQ 618
Score = 187 (70.9 bits), Expect = 9.9e-61, Sum P(2) = 9.9e-61
Identities = 43/83 (51%), Positives = 53/83 (63%)
Query: 265 DVLFDPTKLSKFK-KNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPG 323
D L DP KLS +Q L K + + + ++ATNIAETSLT+DGI YVVD G
Sbjct: 536 DALNDPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAG 595
Query: 324 FVKQKVYNSKTGMDSLVVTPISQ 346
+ K KVYN K GMD+L +TPISQ
Sbjct: 596 YSKLKVYNPKMGMDTLQITPISQ 618
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 490 (177.5 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 95/151 (62%), Positives = 122/151 (80%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
SS KT TI EQR+ LPI+ +++L+K + +N ++I++GETGSGKTTQ+ QYL E G+
Sbjct: 643 SSEFSKTK-TIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGY 701
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
+ GKIGCTQPRRVAA+SVAKRV+EE LG EVGY+IRFEDCTS+ET IKYMTDG+LL
Sbjct: 702 SKFGKIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILL 761
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE D +L+ YS I++DEAHER+++TDVLF
Sbjct: 762 RESFNDPNLDKYSAIIMDEAHERSLNTDVLF 792
Score = 339 (124.4 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 64/100 (64%), Positives = 78/100 (78%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+T C + ER+K LGP P L +LP+YS LPS+MQ +IFE A GSRK +IATNI
Sbjct: 876 GQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNI 935
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI YV+D G+ K KVYN + GMDSL VTPIS+
Sbjct: 936 AETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISK 975
Score = 174 (66.3 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +IATNIAETSLT+DGI YV+D G+ K KVYN + GMDSL VTPIS+
Sbjct: 928 KCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISK 975
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 483 (175.1 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
Identities = 88/142 (61%), Positives = 116/142 (81%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCT 186
+I +QR+ LP++ + +++ + +N ++I++GETGSGKTTQ+ QYL E GF G IGCT
Sbjct: 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCT 492
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
QPRRVAAMSVA+RVA+E G LGQ+VGY IRFEDCTS +T+IKYMTDG+LLRECL D L
Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552
Query: 247 NNYSVIMLDEAHERTIHTDVLF 268
+ YS I++DEAHER+++TDVLF
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLF 574
Score = 310 (114.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 55/100 (55%), Positives = 77/100 (77%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 659 GQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNI 717
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+DPGF K KVYN + GMD+L + P+SQ
Sbjct: 718 AETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQ 757
Score = 174 (66.3 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++ATNIAETSLT+DGI +V+DPGF K KVYN + GMD+L + P+SQ
Sbjct: 710 KAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQ 757
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 483 (175.1 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
Identities = 88/142 (61%), Positives = 116/142 (81%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCT 186
+I +QR+ LP++ + +++ + +N ++I++GETGSGKTTQ+ QYL E GF G IGCT
Sbjct: 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCT 492
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
QPRRVAAMSVA+RVA+E G LGQ+VGY IRFEDCTS +T+IKYMTDG+LLRECL D L
Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552
Query: 247 NNYSVIMLDEAHERTIHTDVLF 268
+ YS I++DEAHER+++TDVLF
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLF 574
Score = 310 (114.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 55/100 (55%), Positives = 77/100 (77%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 659 GQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNI 717
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+DPGF K KVYN + GMD+L + P+SQ
Sbjct: 718 AETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQ 757
Score = 174 (66.3 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++ATNIAETSLT+DGI +V+DPGF K KVYN + GMD+L + P+SQ
Sbjct: 710 KAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQ 757
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 485 (175.8 bits), Expect = 4.0e-60, Sum P(2) = 4.0e-60
Identities = 101/199 (50%), Positives = 144/199 (72%)
Query: 86 VYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELI 145
V++ +D L+ T +S + P V K + K ++ R+SLP+Y+ K +L+
Sbjct: 376 VFDESQQIDFLLDTKLSAENP-----VDTDKMTDV--KVEKSLESSRKSLPVYQYKDDLL 428
Query: 146 KAVSDNQILIVIGETGSGKTTQITQYLAEAGFT-ARGKIGCTQPRRVAAMSVAKRVAEEF 204
KA+++ Q+L+++ ETGSGKTTQ+ Q+L EAG+T KI CTQPRRVAAMSVA RVA+E
Sbjct: 429 KAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEM 488
Query: 205 GCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHT 264
RLGQEVGY+IRFE+ TS +T+IKY+TDGMLLRE L + DL +YSVI++DEAHERT+HT
Sbjct: 489 DVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHT 548
Query: 265 DVLFDPTK-LSKFKKNQRL 282
D+LF K +++F+ + ++
Sbjct: 549 DILFGLVKDIARFRPDLKV 567
Score = 307 (113.1 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 56/100 (56%), Positives = 78/100 (78%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQ+EI+ E + E + LG +PE+I+ P+Y+ LPSE+Q +IF+ PPG+RKVV+ATNI
Sbjct: 636 GQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNI 695
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TIDG+ +V+D GFVKQ +YN +TGM+SLV P S+
Sbjct: 696 AETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSR 735
Score = 169 (64.5 bits), Expect = 4.0e-60, Sum P(2) = 4.0e-60
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 285 LYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 344
L K +P +VV+ATNIAETS+TIDG+ +V+D GFVKQ +YN +TGM+SLV P
Sbjct: 674 LQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPC 733
Query: 345 SQ 346
S+
Sbjct: 734 SR 735
Score = 59 (25.8 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 53/241 (21%), Positives = 97/241 (40%)
Query: 87 YNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS---FGK---KTNLTIV--EQRQSLPIY 138
Y+SK + L + ++ D W+K +K S + K + L I+ E R ++
Sbjct: 207 YSSKFSSEELALRKLADDPESWRKLASELRKKSRQQYLKPRAQQQLEILRREIRDEEQLF 266
Query: 139 ---KLKHELIKAVSDNQILIVIGETGSGKTTQITQY-LAEAGFTARGKIGCTQPRRVAAM 194
KL I+ + + L+ I E Q T+Y + E FT +GK+ + V
Sbjct: 267 AGEKLTQAEIRELEKKKELLRIAEERQRLEKQATEYQMPEDYFTEQGKLDRKRKEEVLYQ 326
Query: 195 SVA-KRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVI- 252
E+ +G R+E ++ L+ + + E D + I
Sbjct: 327 RYKDSNEGEQNEVTMG--AAEQQRWEAQQINKALLFDQNEWLPPGEKQFDFVFDESQQID 384
Query: 253 -MLDE--AHERTIHTDVLFDPTKLSKFKKNQRLE-PLYNKYEEPNAWRISRVVIATNIAE 308
+LD + E + TD + D K+ K ++ R P+Y +Y++ I+ + +AE
Sbjct: 385 FLLDTKLSAENPVDTDKMTD-VKVEKSLESSRKSLPVY-QYKDDLLKAINEYQVLLIVAE 442
Query: 309 T 309
T
Sbjct: 443 T 443
Score = 42 (19.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 13 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
+IL+ +K + P+L +L + + +E + F+ AP PG R
Sbjct: 549 DILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRR 595
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 468 (169.8 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 93/169 (55%), Positives = 128/169 (75%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
KK +F K+ I+E+R+ LP++K K + IK + +NQ++I++GETGSGKTTQI Q++ +A
Sbjct: 59 KKETFSKRY-YEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDA 117
Query: 176 GFTARGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
G GK +G TQPRRVAA+SVAKRV+EE LG+EVGY+IRFE+ +S+ T +KY+TDG
Sbjct: 118 GLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDG 177
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
MLLRE + D LN Y VI+LDEAHERT+ TD+LF K + K +K+ +L
Sbjct: 178 MLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKL 226
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G+EEI+ C + + G +P + LP+YS+LP Q++IF+ RK +++TNI
Sbjct: 295 GEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCK--ERKCIVSTNI 350
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTIDGI +VVDPGF KQK YN ++ ++SL+V PIS+
Sbjct: 351 AETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISK 390
Score = 169 (64.5 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 32/63 (50%), Positives = 48/63 (76%)
Query: 284 PLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTP 343
P+Y + + + + + +++TNIAETSLTIDGI +VVDPGF KQK YN ++ ++SL+V P
Sbjct: 328 PIYQQSKIFDTCKERKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAP 387
Query: 344 ISQ 346
IS+
Sbjct: 388 ISK 390
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 532 (192.3 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 103/152 (67%), Positives = 126/152 (82%)
Query: 117 KSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAG 176
+S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G
Sbjct: 519 RSEFAKKKS--ILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDG 576
Query: 177 FTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGML 236
+T G IGCTQPRRVAAMSVAKRV+EE G RLG+EVGY IRFEDCTS T+IKYMTDG+L
Sbjct: 577 YTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGIL 636
Query: 237 LRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
LRE L + DL+NYS I++DEAHER+++TDVLF
Sbjct: 637 LRESLREADLDNYSAIIMDEAHERSLNTDVLF 668
Score = 229 (85.7 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ E + E ++ L P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 752 GQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 810
Query: 64 AETSLTIDGIFYVVDPGFVKQKV 86
AETSLT+DGI +V+D G+ K KV
Sbjct: 811 AETSLTVDGIMFVIDSGYCKLKV 833
Score = 109 (43.4 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKV 329
+ + ++ATNIAETSLT+DGI +V+D G+ K KV
Sbjct: 801 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 833
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 532 (192.3 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 103/152 (67%), Positives = 126/152 (82%)
Query: 117 KSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAG 176
+S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G
Sbjct: 522 RSEFAKKKS--ILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDG 579
Query: 177 FTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGML 236
+T G IGCTQPRRVAAMSVAKRV+EE G RLG+EVGY IRFEDCTS T+IKYMTDG+L
Sbjct: 580 YTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGIL 639
Query: 237 LRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
LRE L + DL+NYS I++DEAHER+++TDVLF
Sbjct: 640 LRESLREADLDNYSAIIMDEAHERSLNTDVLF 671
Score = 229 (85.7 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ E + E ++ L P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 755 GQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 813
Query: 64 AETSLTIDGIFYVVDPGFVKQKV 86
AETSLT+DGI +V+D G+ K KV
Sbjct: 814 AETSLTVDGIMFVIDSGYCKLKV 836
Score = 109 (43.4 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKV 329
+ + ++ATNIAETSLT+DGI +V+D G+ K KV
Sbjct: 804 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 836
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 467 (169.5 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 87/138 (63%), Positives = 112/138 (81%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPR 189
EQR+ LP + ++ +L+ + DNQ+LIV+GETGSGKTTQ+ Q+L E G+ G IGCTQPR
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPR 546
Query: 190 RVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNY 249
RVAAMSVAKRV+EE G RLG VGY+IRFED T +T+IKYMTDG+LLRE L+ +L Y
Sbjct: 547 RVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKY 606
Query: 250 SVIMLDEAHERTIHTDVL 267
SVI++DEAHER+++TD+L
Sbjct: 607 SVIIMDEAHERSLNTDIL 624
Score = 315 (115.9 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 60/100 (60%), Positives = 79/100 (79%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ CEI+ +R+ L D P L ILP+YS +P+++Q +IF++A PG RKVV+ATNI
Sbjct: 709 GQEDIEATCEIIADRLNQLH-DAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNI 767
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+ GI YVVD G+ K K+YNSK G+D+L VTPISQ
Sbjct: 768 AETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQ 807
Score = 174 (66.3 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +VV+ATNIAETSLT+ GI YVVD G+ K K+YNSK G+D+L VTPISQ
Sbjct: 758 VRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQ 807
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 521 (188.5 bits), Expect = 3.3e-58, Sum P(2) = 3.3e-58
Identities = 102/151 (67%), Positives = 124/151 (82%)
Query: 118 SSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF 177
S F KK + I+EQRQ LPI+ ++ EL+ + DN I+IV+GETGSGKTTQ+TQYL E G+
Sbjct: 517 SEFAKKKS--ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY 574
Query: 178 TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
T G IGCTQPRRVAAMSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LL
Sbjct: 575 TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILL 634
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
RE L + DL++YS I++DEAHER+++TDVLF
Sbjct: 635 RESLREADLDHYSAIIMDEAHERSLNTDVLF 665
Score = 236 (88.1 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 749 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 807
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV + G L + I +
Sbjct: 808 AETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQK 847
Score = 117 (46.2 bits), Expect = 3.3e-58, Sum P(2) = 3.3e-58
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV + G L + I +
Sbjct: 798 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQK 847
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 569 (205.4 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 112/191 (58%), Positives = 144/191 (75%)
Query: 88 NSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKA 147
N K + + + + EW+K+ + + S+GK+T+L I QRQ+LP+Y ++ ELI+A
Sbjct: 437 NKKDSRNEIQMLKNQLIVTEWEKNRMN-ESISYGKRTSLPISAQRQTLPVYAMRSELIQA 495
Query: 148 VSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCR 207
V DNQ L+++GETGSGKTTQITQYL E GF+ G IGCTQPRRVAA+SVAKRVAEE GC+
Sbjct: 496 VRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCK 555
Query: 208 LGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+G +VGYTIRFED T +T IKYMTDGML RE L+D +++ YSVIMLDEAHERT+ TDVL
Sbjct: 556 VGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVL 615
Query: 268 FDPTKLSKFKK 278
F K + K+
Sbjct: 616 FALLKKAAIKR 626
Score = 379 (138.5 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 86/163 (52%), Positives = 114/163 (69%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEID+ CEILY+R+K+LG + EL+ILPVYSALPSE+Q++IFE P GSRKVV ATNI
Sbjct: 700 GQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNI 759
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIG----GK--- 116
AETS+TIDGI+YVVDPGF K +YN++ G++ L+V+PISQ +K G GK
Sbjct: 760 AETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYR 819
Query: 117 ---KSSF-GKKTNLTIVE-QRQSLPIYKLKHELIKAVSDNQIL 154
+S+F + T+ E QRQ+L L ++KA+ N +L
Sbjct: 820 LYTESAFYNEMLENTVPEIQRQNLSHTIL---MLKAMGINDLL 859
Score = 195 (73.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 57/168 (33%), Positives = 87/168 (51%)
Query: 192 AAMSVAKRVAEEF-GCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
A ++ AK +E F C + G T E S + Y+ + +C++D+ +N
Sbjct: 636 ATLNSAK-FSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAAL---DCVIDIHINEGP 691
Query: 251 ---VIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPLYN--------KYEEPNAWRIS 298
++ L E ++L+D K L + P+Y+ K EP
Sbjct: 692 GDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSR 751
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV ATNIAETS+TIDGI+YVVDPGF K +YN++ G++ L+V+PISQ
Sbjct: 752 KVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQ 799
Score = 61 (26.5 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 274 SKFKKNQRLEPLYNKY-EEPNAWRISRV 300
S+ +K ++ PL+NK+ ++ N+WR+S +
Sbjct: 1106 SQSRKKAKIIPLHNKFAKDQNSWRLSSI 1133
Score = 38 (18.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
M+ E A ++L+ +K PEL ++ + L S + F P
Sbjct: 601 MLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCP 651
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 444 (161.4 bits), Expect = 4.1e-57, Sum P(2) = 4.1e-57
Identities = 90/160 (56%), Positives = 121/160 (75%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ + + Q ++++GETG GK+TQI QYLAEAG+TA G++ G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L YSVIMLDEAHERT++TD+ K + K + + RL
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 204
Score = 248 (92.4 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 57/135 (42%), Positives = 82/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ ++ GG+ S G
Sbjct: 343 NVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASAN-QRAGRGGRSRS-G 400
Query: 122 KKTNLTIVEQRQSLP 136
K L E LP
Sbjct: 401 KCYRLYTEEAFDKLP 415
Score = 168 (64.2 bits), Expect = 4.1e-57, Sum P(2) = 4.1e-57
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 367 AYNPRTAIECLVVVPVSQ 384
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 430 (156.4 bits), Expect = 4.8e-57, Sum P(2) = 4.8e-57
Identities = 85/145 (58%), Positives = 107/145 (73%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQP 188
E R+SLP+Y + E +K +++NQ LIV+GETGSGKTTQ+ QYL EAG++ + I CTQP
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQP 283
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFED-CTSSETLIKYMTDGMLLRECLVDLDLN 247
RRVAA SVA RVA E +LG++VGY IRF+D C T+IKY+TDGMLLRE L D L
Sbjct: 284 RRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLG 343
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTK 272
YS IM+DEAHERT+ T++L K
Sbjct: 344 KYSAIMIDEAHERTLSTEILLSLLK 368
Score = 294 (108.6 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 55/100 (55%), Positives = 75/100 (75%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQ+EI+T EIL + + LG + +I+ +Y+ LP E+Q +IF+ P +RK+V+ATNI
Sbjct: 451 GQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNI 510
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TIDGI YV+DPG+VKQ VYN TGM+SLVV P S+
Sbjct: 511 AETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSR 550
Score = 192 (72.6 bits), Expect = 4.8e-57, Sum P(2) = 4.8e-57
Identities = 41/78 (52%), Positives = 51/78 (65%)
Query: 269 DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQK 328
DP + N E L K +P ++V+ATNIAETS+TIDGI YV+DPG+VKQ
Sbjct: 474 DPMIVCSIYANLPQE-LQQKIFQPTPSNTRKIVLATNIAETSITIDGISYVIDPGYVKQN 532
Query: 329 VYNSKTGMDSLVVTPISQ 346
VYN TGM+SLVV P S+
Sbjct: 533 VYNPTTGMESLVVVPCSR 550
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 444 (161.4 bits), Expect = 7.0e-57, Sum P(2) = 7.0e-57
Identities = 90/160 (56%), Positives = 121/160 (75%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ + + Q ++++GETG GK+TQI QYLAEAG+TA G++ G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L YSVIMLDEAHERT++TD+ K + K + + RL
Sbjct: 165 PLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 204
Score = 248 (92.4 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 57/135 (42%), Positives = 82/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ ++ GG+ S G
Sbjct: 343 NVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASAN-QRAGRGGRSRS-G 400
Query: 122 KKTNLTIVEQRQSLP 136
K L E LP
Sbjct: 401 KCYRLYTEEAFDKLP 415
Score = 168 (64.2 bits), Expect = 7.0e-57, Sum P(2) = 7.0e-57
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 367 AYNPRTAIECLVVVPVSQ 384
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 446 (162.1 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 96/177 (54%), Positives = 131/177 (74%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
K + + + I +QR+SLP + ++++L+ + DNQ+ IVIGETGSGKTTQ+TQ+L E
Sbjct: 339 KNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYED 398
Query: 176 GFTAR----GK---IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSE-TL 227
GF A G+ I CTQPRRVAAMSVAKRV+EE C+LG+EVGY+IRFED T ++ T+
Sbjct: 399 GFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTV 458
Query: 228 IKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK--LSKFKKNQRL 282
IKYMT+G+LLRE L D L NYS I++DEAHER+++TD+L K L+K +K+ +L
Sbjct: 459 IKYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAK-RKDLKL 514
Score = 270 (100.1 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 54/99 (54%), Positives = 70/99 (70%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ C+++ E++ L D P L I P+YS +P ++Q +IF RKVV+ATNI
Sbjct: 591 GQEDIEITCDLIKEKLNLL-EDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNI 649
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPIS 102
AETSLT+DGI YV+D G VK KVYN K GMD+L V PIS
Sbjct: 650 AETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPIS 688
Score = 177 (67.4 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 43/83 (51%), Positives = 54/83 (65%)
Query: 265 DVLFDPTKLSKFKKNQRL-EPLYNK-YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDP 322
++L DP L F + + L K + + N R +VV+ATNIAETSLT+DGI YV+D
Sbjct: 607 NLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNLQR-RKVVVATNIAETSLTVDGIKYVIDC 665
Query: 323 GFVKQKVYNSKTGMDSLVVTPIS 345
G VK KVYN K GMD+L V PIS
Sbjct: 666 GLVKVKVYNPKLGMDTLQVVPIS 688
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 441 (160.3 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 90/160 (56%), Positives = 121/160 (75%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ + + Q +++IGETG GK+TQI QYLAEAG+TA G++ G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT+ T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L YS IMLDEAHERT++TD+ K + K + + RL
Sbjct: 165 PLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 204
Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 59/135 (43%), Positives = 83/135 (61%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++LG + L ILP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ ++ GG+ S G
Sbjct: 343 NVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASAN-QRAGRGGRSRS-G 400
Query: 122 KKTNLTIVEQRQSLP 136
K L E LP
Sbjct: 401 KCYRLYTEEAFDQLP 415
Score = 169 (64.5 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 307 KRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 367 AYNPRTAIECLVVVPVSQ 384
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 455 (165.2 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 94/167 (56%), Positives = 123/167 (73%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCT 186
I E R+SLPI ++ L++ V N ILI++GETGSGKTTQ+ Q+L AGF GK IG T
Sbjct: 34 IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGIT 93
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
QPRR+AA++VAKRVAEE +LGQ+VGY+IRF+D TS T +KYMTDG+LLRE L+D L
Sbjct: 94 QPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHL 153
Query: 247 NNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPN 293
+ YSVI++DEAH+R++HTDVL L K ++ R +P+ K E N
Sbjct: 154 SRYSVIIVDEAHDRSVHTDVLL--ALLKKIQRT-RSQPVSEKTEFGN 197
Score = 265 (98.3 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 51/100 (51%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQ+EI++ ++ ER++++ D +L+ L ++SALPSE Q ++F AP G RKV++ATNI
Sbjct: 300 GQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNI 359
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TI GI YV+DPGFVK + Y+ GM+SL V P S+
Sbjct: 360 AETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASK 399
Score = 153 (58.9 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P +R +V++ATNIAETS+TI GI YV+DPGFVK + Y+ GM+SL V P S+
Sbjct: 347 PTGFR--KVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASK 399
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 434 (157.8 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 87/147 (59%), Positives = 116/147 (78%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA--GFTA--RGK- 182
I+E+R++LP++ K E +K +++NQ LI++GETGSGKTTQI Q++ +A T+ R K
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 183 -IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
+GCTQPRRVAAMSV++RVAEE +G+EVGY+IRFEDC+S T++KY+TDGMLLRE +
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLF 268
D L Y VI+LDEAHERT+ TDVLF
Sbjct: 174 ADPLLERYKVIILDEAHERTLATDVLF 200
Score = 276 (102.2 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 55/107 (51%), Positives = 77/107 (71%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP-------PGSRK 56
G+EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+ AP P RK
Sbjct: 284 GEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRK 343
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 344 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 390
Score = 176 (67.0 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 32/48 (66%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 343 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 390
Score = 41 (19.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 11 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
A ++L+ +K + + P+L ++ + + L +E F AP
Sbjct: 195 ATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAP 235
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 439 (159.6 bits), Expect = 3.3e-56, Sum P(2) = 3.3e-56
Identities = 88/160 (55%), Positives = 121/160 (75%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ V + Q ++++GETG GK+TQ+ QYLAEAG+TA G++ G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVA+E G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L YSV+MLDEAHERT++TD+ K + K + + RL
Sbjct: 165 PLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 204
Score = 248 (92.4 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 56/135 (41%), Positives = 82/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GF+K + YN +T ++ LVV P+SQ ++ GG+ S G
Sbjct: 343 NVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASAN-QRAGRGGRNRS-G 400
Query: 122 KKTNLTIVEQRQSLP 136
K L E + LP
Sbjct: 401 KCYRLYTEEAFEQLP 415
Score = 165 (63.1 bits), Expect = 3.3e-56, Sum P(2) = 3.3e-56
Identities = 35/78 (44%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RIS----RVVIATNIAETSLTIDGIFYVVDPGFVKQK 328
KK+ R+ P+Y +E+ + R+S +V++ATN+AETS+TI GI YV+D GF+K +
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 367 AYNPRTAIECLVVVPVSQ 384
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 439 (159.6 bits), Expect = 3.5e-56, Sum P(2) = 3.5e-56
Identities = 89/160 (55%), Positives = 120/160 (75%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ + + Q ++++GETG GK+TQI QYLAEAG+TA G++ G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L YS IMLDEAHERT++TD+ K + K + + RL
Sbjct: 165 PLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 204
Score = 249 (92.7 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 56/135 (41%), Positives = 81/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++LG + L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ + G +S G
Sbjct: 343 NVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRS--G 400
Query: 122 KKTNLTIVEQRQSLP 136
K L + LP
Sbjct: 401 KCYRLYTEDAFDQLP 415
Score = 168 (64.2 bits), Expect = 3.5e-56, Sum P(2) = 3.5e-56
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 367 AYNPRTAIECLVVVPVSQ 384
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 451 (163.8 bits), Expect = 4.6e-56, Sum P(2) = 4.6e-56
Identities = 94/164 (57%), Positives = 121/164 (73%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
KK++ K L ++ ++SLPIYK KHEL+ AV +N I+I++GETGSGKTTQI QYL E
Sbjct: 462 KKNTLKDKEEL--LKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEE 519
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
G+ G I CTQPRRVAA+SVA RV+ E +G VGYTIRFED T+ +T I+Y+TDG+
Sbjct: 520 GYHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGI 579
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKN 279
LLRE L D +L+ YSVI++DEAHER+I+TDVL K K+N
Sbjct: 580 LLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRN 623
Score = 211 (79.3 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
I P+YS L SE Q++IF+ RK++++TNIAETSLT+DGI YV+D G+ K KVYN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 91 TGMDSLVVTPISQ 103
GMD L VTPISQ
Sbjct: 832 IGMDVLQVTPISQ 844
Score = 167 (63.8 bits), Expect = 4.6e-56, Sum P(2) = 4.6e-56
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 279 NQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDS 338
+++ ++ KY+ + +++++TNIAETSLT+DGI YV+D G+ K KVYN GMD
Sbjct: 783 SEQQSKIFKKYD------LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDV 836
Query: 339 LVVTPISQ 346
L VTPISQ
Sbjct: 837 LQVTPISQ 844
Score = 44 (20.5 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 4 GQEEIDTACEILYER 18
GQE+I+ C +L ER
Sbjct: 701 GQEDINATCYLLSER 715
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 451 (163.8 bits), Expect = 4.6e-56, Sum P(2) = 4.6e-56
Identities = 94/164 (57%), Positives = 121/164 (73%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
KK++ K L ++ ++SLPIYK KHEL+ AV +N I+I++GETGSGKTTQI QYL E
Sbjct: 462 KKNTLKDKEEL--LKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEE 519
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
G+ G I CTQPRRVAA+SVA RV+ E +G VGYTIRFED T+ +T I+Y+TDG+
Sbjct: 520 GYHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGI 579
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKN 279
LLRE L D +L+ YSVI++DEAHER+I+TDVL K K+N
Sbjct: 580 LLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRN 623
Score = 211 (79.3 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
I P+YS L SE Q++IF+ RK++++TNIAETSLT+DGI YV+D G+ K KVYN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 91 TGMDSLVVTPISQ 103
GMD L VTPISQ
Sbjct: 832 IGMDVLQVTPISQ 844
Score = 167 (63.8 bits), Expect = 4.6e-56, Sum P(2) = 4.6e-56
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 279 NQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDS 338
+++ ++ KY+ + +++++TNIAETSLT+DGI YV+D G+ K KVYN GMD
Sbjct: 783 SEQQSKIFKKYD------LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDV 836
Query: 339 LVVTPISQ 346
L VTPISQ
Sbjct: 837 LQVTPISQ 844
Score = 44 (20.5 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 4 GQEEIDTACEILYER 18
GQE+I+ C +L ER
Sbjct: 701 GQEDINATCYLLSER 715
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 431 (156.8 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 84/147 (57%), Positives = 114/147 (77%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF---TARGK-- 182
I+E+R+ LP++ K + + ++ NQ LI++GETGSGKTTQI Q++ +A + +G+
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 183 -IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
+GCTQPRRVAAMSV++RVA+E +G+EVGY+IRFEDCTSS T++KY+TDGMLLRE +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLF 268
D L Y VI+LDEAHERT+ TDVLF
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLF 204
Score = 279 (103.3 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 55/107 (51%), Positives = 77/107 (71%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP-------PGSRK 56
G+EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+ AP P RK
Sbjct: 288 GEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRK 347
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 394
Score = 176 (67.0 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 32/48 (66%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 347 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 394
Score = 42 (19.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 11 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
A ++L+ +K + + P+L ++ + + L +E F AP
Sbjct: 199 ATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAP 239
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 439 (159.6 bits), Expect = 5.5e-56, Sum P(2) = 5.5e-56
Identities = 88/160 (55%), Positives = 121/160 (75%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ V + Q ++++GETG GK+TQ+ QYLAEAG+TA G++ G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVA+E G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L YSV+MLDEAHERT++TD+ K + K + + RL
Sbjct: 165 PLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 204
Score = 248 (92.4 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 56/135 (41%), Positives = 82/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GF+K + YN +T ++ LVV P+SQ ++ GG+ S G
Sbjct: 343 NVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASAN-QRAGRGGRNRS-G 400
Query: 122 KKTNLTIVEQRQSLP 136
K L E + LP
Sbjct: 401 KCYRLYTEEAFEQLP 415
Score = 165 (63.1 bits), Expect = 5.5e-56, Sum P(2) = 5.5e-56
Identities = 35/78 (44%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RIS----RVVIATNIAETSLTIDGIFYVVDPGFVKQK 328
KK+ R+ P+Y +E+ + R+S +V++ATN+AETS+TI GI YV+D GF+K +
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 367 AYNPRTAIECLVVVPVSQ 384
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 430 (156.4 bits), Expect = 6.8e-56, Sum P(2) = 6.8e-56
Identities = 84/142 (59%), Positives = 106/142 (74%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA--EAGFTARGKIGC 185
I+E R+ LP+Y+ + E +K +NQI++ +GETGSGKTTQI Q++ E +I C
Sbjct: 68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIAC 127
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAAMSVAKRVA+E LG+EVGY IRFEDC+ TL+KYMTDGMLLRE + D
Sbjct: 128 TQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHM 187
Query: 246 LNNYSVIMLDEAHERTIHTDVL 267
L+ YS I+LDEAHERT+ TD+L
Sbjct: 188 LSRYSCIILDEAHERTLATDIL 209
Score = 242 (90.2 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 56/108 (51%), Positives = 71/108 (65%)
Query: 4 GQEEIDTACEILYERMKSL---GPDVPELIILPVYSALPSEMQTRIFEAAPPGS-----R 55
G+EEI+ AC + L G P L + P+Y +LP Q RIFE P + R
Sbjct: 294 GEEEIEDACRKITLEADDLVREGAAGP-LKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGR 352
Query: 56 KVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
KVVI+TNIAETSLTIDGI YVVDPGF KQK+YN + ++SL+V+PIS+
Sbjct: 353 KVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 400
Score = 176 (67.0 bits), Expect = 6.8e-56, Sum P(2) = 6.8e-56
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVI+TNIAETSLTIDGI YVVDPGF KQK+YN + ++SL+V+PIS+
Sbjct: 353 KVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 400
Score = 42 (19.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 11 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
A +IL MK L P+L I+ + + L ++ + F AP
Sbjct: 205 ATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAP 245
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 439 (159.6 bits), Expect = 3.0e-55, Sum P(2) = 3.0e-55
Identities = 93/171 (54%), Positives = 121/171 (70%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
G F T LTI +QRQ LP++K ++ ++ V Q ++++GETGSGK+TQI QYL E
Sbjct: 24 GSPIVFNPHTALTIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLE 83
Query: 175 AGFTARGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSE-TLIKYMT 232
AG+ A GK IG TQPRRVAA SVA RVAEE G LG EVGYTIRF+DC+ T IK++T
Sbjct: 84 AGWAAEGKVIGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLT 143
Query: 233 DGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
DGML+RE + D L YSV++LDEAHERT++TD+ K + K +++ RL
Sbjct: 144 DGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRL 194
Score = 241 (89.9 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 48/102 (47%), Positives = 70/102 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++ +L E+ ++L L +LP+Y+ LP Q R+FE P RKVV+AT
Sbjct: 273 GQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVAT 332
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
NIAETS+TI+G+ +V+D FVK + YN +T ++SL+VTPIS+
Sbjct: 333 NIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISK 374
Score = 157 (60.3 bits), Expect = 3.0e-55, Sum P(2) = 3.0e-55
Identities = 28/50 (56%), Positives = 42/50 (84%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +VV+ATNIAETS+TI+G+ +V+D FVK + YN +T ++SL+VTPIS+
Sbjct: 325 VRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISK 374
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 442 (160.7 bits), Expect = 3.6e-55, Sum P(2) = 3.6e-55
Identities = 91/149 (61%), Positives = 115/149 (77%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
+K LTI E R+ LP+++ K EL++ + NQ+LI++GETGSGKTTQ+ QYL E GFT +G
Sbjct: 210 EKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQG 269
Query: 182 K--IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTS-SETLIKYMTDGMLLR 238
K I TQPRRVAA SVA RVA+E LG+EVGY IRFED T+ ++T++KYMTDGMLLR
Sbjct: 270 KLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLR 329
Query: 239 ECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
E L D L+ YS IM+DEAHERT+ TD+L
Sbjct: 330 EFLTDSKLSKYSCIMIDEAHERTLATDIL 358
Score = 269 (99.8 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 63/156 (40%), Positives = 88/156 (56%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ L E M LG ++II P+Y+ LP E Q +IF+ P RKVV+ATNI
Sbjct: 444 GQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNI 503
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIG--GKKSSFG 121
AETSLTIDGI YV+DPGFVK+ Y TGM L+ P S+ + + G G F
Sbjct: 504 AETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFR 563
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVI 157
T + + + + +P K E+ + N +L+++
Sbjct: 564 IFTKWSYLHELELMP----KPEITRTNLSNTVLLLL 595
Score = 162 (62.1 bits), Expect = 3.6e-55, Sum P(2) = 3.6e-55
Identities = 39/84 (46%), Positives = 49/84 (58%)
Query: 271 TKLSKFKKNQRLEPLY-N-------KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDP 322
+KL K + P+Y N K +P +VV+ATNIAETSLTIDGI YV+DP
Sbjct: 460 SKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDP 519
Query: 323 GFVKQKVYNSKTGMDSLVVTPISQ 346
GFVK+ Y TGM L+ P S+
Sbjct: 520 GFVKENSYVPSTGMTQLLTVPCSR 543
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 419 (152.6 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 87/168 (51%), Positives = 122/168 (72%)
Query: 102 SQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETG 161
+Q L + K + G++ F K + I++ R+ LP++ + E +K +NQI++ +GETG
Sbjct: 63 AQKLEDGKINPFTGRE--FTPKY-VDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETG 119
Query: 162 SGKTTQITQYLA--EAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFE 219
SGKTTQI Q++ E ++ CTQPRRVAAMSVA+RVAEE +LG+EVGY+IRFE
Sbjct: 120 SGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFE 179
Query: 220 DCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ TS++T++KYMTDGMLLRE + D DL+ YS I+LDEAHERT+ TD+L
Sbjct: 180 NKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDIL 227
Score = 239 (89.2 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 60/112 (53%), Positives = 75/112 (66%)
Query: 4 GQEEIDTAC-EILYE-----RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP------ 51
G++EI+ A +I E R + GP L + P+Y +LP Q RIFE AP
Sbjct: 312 GEDEIEDAVRKISLEGDQLVREEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESHNGR 367
Query: 52 PGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
PG RKVVI+TNIAETSLTIDGI YVVDPGF KQKVYN + ++SL+V+PIS+
Sbjct: 368 PG-RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK 418
Score = 177 (67.4 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VVI+TNIAETSLTIDGI YVVDPGF KQKVYN + ++SL+V+PIS+
Sbjct: 371 KVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK 418
Score = 50 (22.7 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 30/111 (27%), Positives = 42/111 (37%)
Query: 246 LNNYSVIMLDEAHERTIHT---DVLFDPTKLSKFKK-NQRLEPLYNKYEEPNAWRISRVV 301
LN Y DEA+E IH D + LS +LE L N+Y +
Sbjct: 583 LNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYN---------LE 633
Query: 302 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDG--HP 350
+ T E+ D I + GF Q V ++G + +QD HP
Sbjct: 634 LNTTDYESPKYFDNIRKALASGFFMQ-VAKKRSGAKGYITVKDNQDVLIHP 683
Score = 43 (20.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 11 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
A +IL +K + P+L I+ + + L +E R F AP
Sbjct: 223 ATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAP 263
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 446 (162.1 bits), Expect = 3.4e-54, Sum P(2) = 3.4e-54
Identities = 92/153 (60%), Positives = 113/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +LN +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHL 204
Score = 241 (89.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 54/107 (50%), Positives = 73/107 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 145 (56.1 bits), Expect = 3.4e-54, Sum P(2) = 3.4e-54
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 414 (150.8 bits), Expect = 9.8e-54, Sum P(2) = 9.8e-54
Identities = 84/143 (58%), Positives = 108/143 (75%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQY--LAEAGFTARGKIG 184
+I++ R+ LP++ + E ++ +QIL+ +GETGSGKTTQI Q+ L + T R I
Sbjct: 91 SILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIA 150
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA E LG+EVGY+IRFED TS +TL+KYMTDGMLLRE + D
Sbjct: 151 CTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDH 210
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
+L+ YS I+LDEAHERT+ TDVL
Sbjct: 211 ELSRYSTIILDEAHERTMSTDVL 233
Score = 242 (90.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 57/109 (52%), Positives = 74/109 (67%)
Query: 4 GQEEI-DTACEILYERMKSLGP-DVPELIILPVYSALPSEMQTRIFEAAPP----GSR-- 55
G+EEI D A +I E + + D L + +Y +LP MQ RIFE APP G R
Sbjct: 318 GEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPG 377
Query: 56 -KVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
KV+++TNIAETSLTIDGI YVVDPGF KQK+YN + ++SL+V+PIS+
Sbjct: 378 RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 426
Score = 174 (66.3 bits), Expect = 9.8e-54, Sum P(2) = 9.8e-54
Identities = 32/48 (66%), Positives = 43/48 (89%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+++TNIAETSLTIDGI YVVDPGF KQK+YN + ++SL+V+PIS+
Sbjct: 379 KVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 426
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 433 (157.5 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 97/217 (44%), Positives = 140/217 (64%)
Query: 62 NIAETSLTIDGIF---YVVDPGFVKQKVYNSKTGMDSLV--VTPISQDLPEWKKHVIGGK 116
+I + +LT DG+ + P K + + T S V V + QD V+G
Sbjct: 13 SITKQNLT-DGLVGGQRIKAPNKKKNRKASKNTTKKSTVSVVNFLEQDTDFGANEVVGSD 71
Query: 117 KSSFGKKTNLT------IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQ 170
SS K++ + I+EQR++LPI++ L + + DN++++V+GETGSGK+TQI Q
Sbjct: 72 NSSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQ 131
Query: 171 YLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKY 230
+L E + G + TQPRRVAA+++AKRVA E GCRLG++VGY+IRF+D TS +T IKY
Sbjct: 132 FLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKY 191
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+TDGMLLRE + D L+ Y ++LDEAHERT+ TD+L
Sbjct: 192 LTDGMLLRELINDPILSQYHTLILDEAHERTLMTDML 228
Score = 228 (85.3 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 46/100 (46%), Positives = 67/100 (67%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQ+EI+ ++ K L ++P++ P++++LP E Q ++F A RKVV++TNI
Sbjct: 313 GQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNI 372
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TI GI YV+D G K K +NSK G++SL V PISQ
Sbjct: 373 AETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQ 412
Score = 151 (58.2 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV++TNIAETS+TI GI YV+D G K K +NSK G++SL V PISQ
Sbjct: 365 KVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQ 412
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 441 (160.3 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 91/153 (59%), Positives = 113/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L+ +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHL 204
Score = 241 (89.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 54/107 (50%), Positives = 73/107 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 145 (56.1 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 440 (159.9 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 91/153 (59%), Positives = 112/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 204
Score = 241 (89.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 54/107 (50%), Positives = 73/107 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 145 (56.1 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 440 (159.9 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 91/153 (59%), Positives = 112/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 204
Score = 241 (89.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 54/107 (50%), Positives = 73/107 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 145 (56.1 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 440 (159.9 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 91/153 (59%), Positives = 112/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 112 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 204
Score = 241 (89.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 54/107 (50%), Positives = 73/107 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 145 (56.1 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 408 (148.7 bits), Expect = 2.4e-53, Sum P(2) = 2.4e-53
Identities = 77/146 (52%), Positives = 113/146 (77%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT-ARGKIGCT 186
+ ++R +LP+++ + + ++ +S +Q ++++GETGSGKTTQI Q+ + + R + CT
Sbjct: 65 LYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCT 124
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
QPRRVAAMSVA+RV+EE +LG+EVGY+IRFEDC++++TL+KYMTDGMLLRE + D L
Sbjct: 125 QPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPML 184
Query: 247 NNYSVIMLDEAHERTIHTDVLFDPTK 272
+ Y VI+LDEAHERT+ TD+L K
Sbjct: 185 DQYQVILLDEAHERTLATDILMGVLK 210
Score = 290 (107.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 58/106 (54%), Positives = 80/106 (75%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEI+ AC+ + + +LG ++ EL +P+YS LP +Q RIFE APP G+ RKV
Sbjct: 291 GQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKV 350
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 351 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISK 396
Score = 175 (66.7 bits), Expect = 2.4e-53, Sum P(2) = 2.4e-53
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 292 PNA-WRISR-VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
PNA I R VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V+PIS+
Sbjct: 340 PNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISK 396
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 438 (159.2 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 90/153 (58%), Positives = 112/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + ++I+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 204
Score = 241 (89.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 54/107 (50%), Positives = 73/107 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
Score = 145 (56.1 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 338 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 387
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 440 (159.9 bits), Expect = 3.2e-53, Sum P(2) = 3.2e-53
Identities = 91/153 (59%), Positives = 112/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + +LI+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 189
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 190 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 249
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 250 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 282
Score = 241 (89.9 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 54/107 (50%), Positives = 73/107 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPD--VPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ +CE+L++ +S+ D V + L+ILP Y ++ ++ Q RIF PPG RK
Sbjct: 359 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 418
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 419 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 465
Score = 145 (56.1 bits), Expect = 3.2e-53, Sum P(2) = 3.2e-53
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 416 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 465
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 422 (153.6 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 79/156 (50%), Positives = 116/156 (74%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQ 187
I+++R+ LPIY +++++KA+ +N+ILI++GETGSGK+TQ+TQYL E + G I CTQ
Sbjct: 431 IIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQ 490
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
PRR+A +++A RVAEE ++G+EVGY IRF++ TS T I YMTDGM LR L + L
Sbjct: 491 PRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLE 550
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
+ SV+++DEAHER +HTDV+ K + F++N R+
Sbjct: 551 DISVLIIDEAHERALHTDVILPIVKDICNFRENIRV 586
Score = 154 (59.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 55 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK++++TNI ETS+TID I YV+D G KQK+YN +G++SLV P S+
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSK 851
Score = 152 (58.6 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 274 SKFKKN--QRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 331
SK K+N + +E L + N R +++++TNI ETS+TID I YV+D G KQK+YN
Sbjct: 779 SKNKRNINEEIEEL-KRINTNNKIR-RKIILSTNICETSITIDNIVYVIDSGLCKQKIYN 836
Query: 332 SKTGMDSLVVTPISQ 346
+G++SLV P S+
Sbjct: 837 PNSGIESLVTLPCSK 851
Score = 103 (41.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFE 48
GQ EI+ + L ++ L P L+ILP+YS+LP E Q RIFE
Sbjct: 655 GQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 38 (18.4 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 13 EILYERMKSLGPDVPEL 29
E+LY +K G D+ EL
Sbjct: 93 ELLYSTVKLEGKDLKEL 109
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 422 (153.6 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 79/156 (50%), Positives = 116/156 (74%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQ 187
I+++R+ LPIY +++++KA+ +N+ILI++GETGSGK+TQ+TQYL E + G I CTQ
Sbjct: 431 IIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQ 490
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
PRR+A +++A RVAEE ++G+EVGY IRF++ TS T I YMTDGM LR L + L
Sbjct: 491 PRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLE 550
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
+ SV+++DEAHER +HTDV+ K + F++N R+
Sbjct: 551 DISVLIIDEAHERALHTDVILPIVKDICNFRENIRV 586
Score = 154 (59.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 55 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK++++TNI ETS+TID I YV+D G KQK+YN +G++SLV P S+
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSK 851
Score = 152 (58.6 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 274 SKFKKN--QRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 331
SK K+N + +E L + N R +++++TNI ETS+TID I YV+D G KQK+YN
Sbjct: 779 SKNKRNINEEIEEL-KRINTNNKIR-RKIILSTNICETSITIDNIVYVIDSGLCKQKIYN 836
Query: 332 SKTGMDSLVVTPISQ 346
+G++SLV P S+
Sbjct: 837 PNSGIESLVTLPCSK 851
Score = 103 (41.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFE 48
GQ EI+ + L ++ L P L+ILP+YS+LP E Q RIFE
Sbjct: 655 GQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 38 (18.4 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 13 EILYERMKSLGPDVPEL 29
E+LY +K G D+ EL
Sbjct: 93 ELLYSTVKLEGKDLKEL 109
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 414 (150.8 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 85/155 (54%), Positives = 113/155 (72%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRR 190
QR+SLPI++ + +L+ + + ++IGETGSGKTTQI QYL E G + +G I TQPRR
Sbjct: 61 QRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 120
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAA+S+A RV++E LG+ VGYT+RFED TS +T IK++TDGMLLRE + D L YS
Sbjct: 121 VAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 180
Query: 251 VIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPL 285
++LDEAHERTIHTDVLF K ++ K+ + L L
Sbjct: 181 CVILDEAHERTIHTDVLFGVVKTAQ-KRRKELGKL 214
Score = 247 (92.0 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 50/116 (43%), Positives = 74/116 (63%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ + + + L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNI
Sbjct: 288 GQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNI 347
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
AETS+TI GI YVVD G VK K YN +G++ L V +S+ W++ G++ S
Sbjct: 348 AETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKT-QAWQRTGRAGREDS 402
Score = 137 (53.3 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P +R +V+I+TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+
Sbjct: 335 PKGYR--KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 387
Score = 39 (18.8 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 32 LPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+P ++LP + R + PPG R V++ T
Sbjct: 1 MPEEASLPPAKRFRP-GSCPPGRRVVMLLT 29
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 428 (155.7 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 86/146 (58%), Positives = 107/146 (73%)
Query: 135 LPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAM 194
LPI + + L++AVS+ LIV GETGSGK+TQ+ +YL EAG G IG TQPRRVA +
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 195 SVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIML 254
SVA+RVAEE GC LG VGY +RF+DC+S ET IKYMTDG LLR L D L+ YS+I+L
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 255 DEAHERTIHTDVLFDPTKLSKFKKNQ 280
DEAHER++ TD+LF K F +N+
Sbjct: 121 DEAHERSLSTDILFGLLK-KLFLQNK 145
Score = 248 (92.4 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 62/162 (38%), Positives = 95/162 (58%)
Query: 4 GQEEIDTACEILYERMKSLG-------PDVPELIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ AC++L+++ +S+ + L+ILP+Y ++ ++ Q RIF AP G RK
Sbjct: 230 GQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIFLPAPKGIRK 289
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGK 116
V++TNIA TSLTI+G+ YVVD GFVKQ +N + G+D L V PIS+ ++ G+
Sbjct: 290 CVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKS-EAMQRAGRAGR 348
Query: 117 KSSFGKKTNLTIVE-QRQSLPIYKLKHELIKAVSDNQILIVI 157
SS GK L E Q +P + + IK S +++ +
Sbjct: 349 TSS-GKSYRLYSTEFWEQCMPDHTVPE--IKRTSLTSVILTL 387
Score = 144 (55.7 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + V++TNIA TSLTI+G+ YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 287 IRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISK 336
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 392 (143.0 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 77/142 (54%), Positives = 102/142 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA--EAGFTARGKIGC 185
I++ R+ LP++ + E +K QI++ +GETGSGKTTQI Q++ E ++ C
Sbjct: 87 ILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVAC 146
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAAMSVA RVA+E LG+EVGY IRFE+ + +T++KYMTDGMLLRE + D D
Sbjct: 147 TQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHD 206
Query: 246 LNNYSVIMLDEAHERTIHTDVL 267
L YS I+LDEAHERT+ TD+L
Sbjct: 207 LTRYSCIILDEAHERTLATDIL 228
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 60/114 (52%), Positives = 77/114 (67%)
Query: 4 GQEEIDTAC-EILYE-----RMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP------ 51
G+EEI+ AC +I E R ++ GP L + P+Y +LP Q +IFE AP
Sbjct: 313 GEEEIEDACRKISLEGDELVREQNCGP----LKVYPLYGSLPPHQQQKIFEPAPTNPNPN 368
Query: 52 --PGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
PG RKV+I+TNIAETSLTIDGI YVVDPGF KQKVYN + ++SL+V+PIS+
Sbjct: 369 GRPG-RKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISK 421
Score = 180 (68.4 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
PN +V+I+TNIAETSLTIDGI YVVDPGF KQKVYN + ++SL+V+PIS+
Sbjct: 367 PNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISK 421
Score = 40 (19.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 11 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
A +IL +K + P+L I+ + + L +E F AP
Sbjct: 224 ATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAP 264
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 394 (143.8 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 79/148 (53%), Positives = 107/148 (72%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K ++ +Q +++GETGSGKTTQI Q+ + + G +
Sbjct: 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVA 163
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 164 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 223
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 224 LLERYGVIILDEAHERTLATDILMGVLK 251
Score = 297 (109.6 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 60/106 (56%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGPDV ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 332 GQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKV 391
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 392 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 437
Score = 171 (65.3 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+PN +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 382 KPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 437
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 386 (140.9 bits), Expect = 3.9e-51, Sum P(2) = 3.9e-51
Identities = 75/142 (52%), Positives = 104/142 (73%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA--EAGFTARGKIGC 185
I++ R++LP+++ + E + QI++ +GETGSGKTTQI QY+ E + + C
Sbjct: 100 ILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVAC 159
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAAMSVA+RVA+E LGQEVGY+IRFE+ T+ T++KYMTDG LLRE + D +
Sbjct: 160 TQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPN 219
Query: 246 LNNYSVIMLDEAHERTIHTDVL 267
+ YS I++DEAHERT+ TD+L
Sbjct: 220 MTRYSCIIIDEAHERTLATDIL 241
Score = 248 (92.4 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 54/109 (49%), Positives = 72/109 (66%)
Query: 4 GQEEIDTACEILYERMKSL--GPDVPELIILPVYSALPSEMQTRIFEAAPP----GSR-- 55
G+EEI+ C + + L D + + P+Y LP + Q +IF AAPP G R
Sbjct: 326 GEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPG 385
Query: 56 -KVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
K ++ATNIAETSLTIDGI YVVDPGF KQK+YN++ ++SL+VTPIS+
Sbjct: 386 RKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISR 434
Score = 179 (68.1 bits), Expect = 3.9e-51, Sum P(2) = 3.9e-51
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 280 QRLEPLYNKYEEP--NAWRISR-VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
Q+ + ++N P R R ++ATNIAETSLTIDGI YVVDPGF KQK+YN++ +
Sbjct: 365 QQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRV 424
Query: 337 DSLVVTPISQ 346
+SL+VTPIS+
Sbjct: 425 ESLLVTPISR 434
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 400 (145.9 bits), Expect = 4.9e-51, Sum P(2) = 4.9e-51
Identities = 79/143 (55%), Positives = 111/143 (77%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTA-RGK-IGC 185
I ++ LP+++ + +L+ + +NQ++++IGETGSGKTTQ+ QYL E G+ RGK I
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSE-TLIKYMTDGMLLRECLVDL 244
TQPRRVAA+SVAKRVA E LG+EVGY+IRFED T SE T +K++TDG+LLRE L+D
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L+ YS +++DEAHER+++TD+L
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDIL 485
Score = 255 (94.8 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 55/109 (50%), Positives = 76/109 (69%)
Query: 4 GQEEIDTACEILYERM-----KSLGP----DVPELIILPVYSALPSEMQTRIFEAAPPGS 54
GQE+I+T + L E+ K G ++ ++ ILP+YSALP+++Q +IF+
Sbjct: 572 GQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTK 631
Query: 55 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
RK++IATNIAETSLTI GI YV+D G+ K KVYN K G+DSLV+TPIS+
Sbjct: 632 RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISK 680
Score = 170 (64.9 bits), Expect = 4.9e-51, Sum P(2) = 4.9e-51
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++IATNIAETSLTI GI YV+D G+ K KVYN K G+DSLV+TPIS+
Sbjct: 633 KIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISK 680
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 394 (143.8 bits), Expect = 5.0e-51, Sum P(2) = 5.0e-51
Identities = 81/149 (54%), Positives = 106/149 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQ----YLAEAGFTARGKI 183
I+++R LP+++ K + +Q +++GETGSGKTTQI Q Y+ RG +
Sbjct: 97 ILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRG-V 155
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVD 243
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 156 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 215
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 216 PLLERYGVIILDEAHERTLATDILMGVLK 244
Score = 293 (108.2 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 325 GQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 384
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 385 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 430
Score = 169 (64.5 bits), Expect = 5.0e-51, Sum P(2) = 5.0e-51
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 277 KKNQRL-EPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
++ QR+ EP K + R +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN +
Sbjct: 362 QQQQRIFEPPPPKKQNGAIGR--KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 419
Query: 336 MDSLVVTPISQ 346
++SL+VT IS+
Sbjct: 420 VESLLVTAISK 430
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 394 (143.8 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 80/148 (54%), Positives = 106/148 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLK 277
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 169 (64.5 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 277 KKNQRL-EPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
++ QR+ EP K + R +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN +
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGR--KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 452
Query: 336 MDSLVVTPISQ 346
++SL+VT IS+
Sbjct: 453 VESLLVTAISK 463
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 394 (143.8 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 80/148 (54%), Positives = 106/148 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLK 277
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 169 (64.5 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 277 KKNQRL-EPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
++ QR+ EP K + R +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN +
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGR--KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 452
Query: 336 MDSLVVTPISQ 346
++SL+VT IS+
Sbjct: 453 VESLLVTAISK 463
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 394 (143.8 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 80/148 (54%), Positives = 106/148 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLK 277
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 169 (64.5 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 277 KKNQRL-EPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
++ QR+ EP K + R +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN +
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGR--KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 452
Query: 336 MDSLVVTPISQ 346
++SL+VT IS+
Sbjct: 453 VESLLVTAISK 463
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 394 (143.8 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 80/148 (54%), Positives = 106/148 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLK 277
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 169 (64.5 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 277 KKNQRL-EPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
++ QR+ EP K + R +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN +
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGR--KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 452
Query: 336 MDSLVVTPISQ 346
++SL+VT IS+
Sbjct: 453 VESLLVTAISK 463
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 394 (143.8 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 80/148 (54%), Positives = 106/148 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLK 277
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 169 (64.5 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 277 KKNQRL-EPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
++ QR+ EP K + R +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN +
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGR--KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 452
Query: 336 MDSLVVTPISQ 346
++SL+VT IS+
Sbjct: 453 VESLLVTAISK 463
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 394 (143.8 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 80/148 (54%), Positives = 106/148 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IG 184
I+++R LP+++ K + +Q +++GETGSGKTTQI Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRRVAAMSVA+RVA+E LGQEVGY+IRFEDC+S++T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
L Y VI+LDEAHERT+ TD+L K
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLK 277
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPP----GS--RKV 57
GQEEID AC+ + + LGP+V ++ I+P+YS LP + Q RIFE PP G+ RKV
Sbjct: 358 GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKV 417
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+VT IS+
Sbjct: 418 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK 463
Score = 169 (64.5 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 277 KKNQRL-EPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
++ QR+ EP K + R +VV++TNIAETSLTIDG+ +V+DPGF KQKVYN +
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGR--KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 452
Query: 336 MDSLVVTPISQ 346
++SL+VT IS+
Sbjct: 453 VESLLVTAISK 463
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 417 (151.9 bits), Expect = 2.0e-50, Sum P(2) = 2.0e-50
Identities = 87/155 (56%), Positives = 112/155 (72%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRR 190
QR+ LPI++ + L+ + + ++IGETGSGKTTQI QYL EAG +G I TQPRR
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRR 79
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAA+S+A RV++E LG+ VGYT+RF+D TS ET IK++TDGMLLRE + D L YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 251 VIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPL 285
V++LDEAHERTIHTDVLF K ++ KK + L L
Sbjct: 140 VVILDEAHERTIHTDVLFGVVKAAQ-KKRKELGKL 173
Score = 251 (93.4 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 50/116 (43%), Positives = 75/116 (64%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ + + K L P++ ++P+Y++LP Q R+F+AAP G RKV+++TNI
Sbjct: 247 GQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNI 306
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
AETS+TI GI YVVD G VK K YN + G++ L V +S+ W++ G++ S
Sbjct: 307 AETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSK-AQAWQRTGRAGREDS 361
Score = 133 (51.9 bits), Expect = 2.0e-50, Sum P(2) = 2.0e-50
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+++TNIAETS+TI GI YVVD G VK K YN + G++ L V +S+
Sbjct: 299 KVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSK 346
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 418 (152.2 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 94/212 (44%), Positives = 136/212 (64%)
Query: 77 VDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWK--KHVIGGKKSSFGKKTNLTIVEQRQS 134
V P VK ++ K D++ +PI + P K I + K+T+ I +Q++S
Sbjct: 14 VGPSPVK---FSFKRKYDAMANSPILEKKPHVAQIKQTIAPILLT-SKRTS--IEQQQKS 67
Query: 135 LPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAM 194
LP++ +H ++K + N ++++ ETGSGKTTQI Q+L AG+ G IG TQPRRVAA+
Sbjct: 68 LPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAAI 127
Query: 195 SVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIML 254
+VA+RVA+E +G VGYT+RFED TS T I+++TDG+LLRE + D L YSVI+L
Sbjct: 128 TVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIIL 187
Query: 255 DEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
DEAHERT++ D+LF K K ++ Q+L L
Sbjct: 188 DEAHERTVNADLLFGIVKDAQKERRKQKLANL 219
Score = 177 (67.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 41/107 (38%), Positives = 61/107 (57%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI++ + + + K +L + +Y+ L Q F P RKV++ATNI
Sbjct: 290 GQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNI 349
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKK 110
AETS+TI GI V+D GFVK+K +N+ G+D L IS+ W++
Sbjct: 350 AETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISK-AQAWQR 395
Score = 130 (50.8 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P + +V++ATNIAETS+TI GI V+D GFVK+K +N+ G+D L IS+
Sbjct: 335 PTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISK 389
Score = 47 (21.6 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 218 FEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVI 252
F D T E L T M+L+ +D+D NN+ +
Sbjct: 419 FADATQPEILRTNPTS-MVLQLLALDIDCNNFDFL 452
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 410 (149.4 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 84/155 (54%), Positives = 113/155 (72%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRR 190
QR+SLPI++ + +L+ + + ++IGETGSGKTTQI QYL E G + +G I TQPRR
Sbjct: 70 QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 129
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAA+S+A RV++E LG+ VGYT+RF+D TS +T IK++TDGMLLRE + D L YS
Sbjct: 130 VAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 189
Query: 251 VIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPL 285
++LDEAHERTIHTDVLF K ++ K+ + L L
Sbjct: 190 CVILDEAHERTIHTDVLFGVVKAAQ-KRRKELGKL 223
Score = 248 (92.4 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 51/116 (43%), Positives = 74/116 (63%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNI
Sbjct: 297 GQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNI 356
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
AETS+TI GI YVVD G VK K YN +G++ L V +S+ W++ G++ S
Sbjct: 357 AETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKT-QAWQRTGRAGREDS 411
Score = 137 (53.3 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P +R +V+I+TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+
Sbjct: 344 PKGYR--KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 396
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 400 (145.9 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 135 LPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQPRRVAA 193
LPI + K ++ V + IV+G+TGSGKTTQ+ QYL +AG+ GK I TQPRRVAA
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAA 81
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+VA RVAEE C+LG++VGY+IRFED TS+ T IK++TDGMLLRE LVD L+ YSVIM
Sbjct: 82 TTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYSVIM 141
Query: 254 LDEAHERTIHTDVL 267
+DEAHER++ TD+L
Sbjct: 142 VDEAHERSLSTDIL 155
Score = 251 (93.4 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 48/100 (48%), Positives = 71/100 (71%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G+EEI+TA +++ ER +L P L+ LP+Y+ L ++ Q +FE AP +RKVV++TNI
Sbjct: 255 GREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNI 314
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AE S+TI+GI YVVD GF K + Y+ TG+++L PIS+
Sbjct: 315 AEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISK 354
Score = 143 (55.4 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
EP +VV++TNIAE S+TI+GI YVVD GF K + Y+ TG+++L PIS+
Sbjct: 299 EPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISK 354
Score = 47 (21.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF--EAAPPGSRKVV 58
MV E + +IL +K + PEL I+ + L +E R F + + G V
Sbjct: 141 MVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGPNGEV 200
Query: 59 IATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
N + ++I+G Y VD F++ N
Sbjct: 201 -GGNTGKI-ISIEGRMYPVDTLFLESAAEN 228
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 378 (138.1 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 79/148 (53%), Positives = 104/148 (70%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE-AGFTARGK---- 182
I E+R LP+++ K + ++ + +NQ + ++GETGSGKTTQI Q+ E +G+
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 183 ---IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRE 239
+ CTQPRRVAAMSVA RVAEE LGQEVGY+IRFEDC S T++KY TDGMLLRE
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Query: 240 CLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ L+ Y V++LDEAHERT+ TD+L
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDIL 216
Score = 279 (103.3 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 58/106 (54%), Positives = 75/106 (70%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKV 57
GQEEI+ AC+ + +++LG D L +P+YS LP Q RIFE APP SRK
Sbjct: 302 GQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKC 361
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V PIS+
Sbjct: 362 VISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK 407
Score = 169 (64.5 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 292 PNAWRISR-VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
PN ISR VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V PIS+
Sbjct: 353 PNG-AISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK 407
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 378 (138.1 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 79/148 (53%), Positives = 104/148 (70%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE-AGFTARGK---- 182
I E+R LP+++ K + ++ + +NQ + ++GETGSGKTTQI Q+ E +G+
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 183 ---IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRE 239
+ CTQPRRVAAMSVA RVAEE LGQEVGY+IRFEDC S T++KY TDGMLLRE
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Query: 240 CLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ L+ Y V++LDEAHERT+ TD+L
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDIL 216
Score = 279 (103.3 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 58/106 (54%), Positives = 75/106 (70%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPG------SRKV 57
GQEEI+ AC+ + +++LG D L +P+YS LP Q RIFE APP SRK
Sbjct: 302 GQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKC 361
Query: 58 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V PIS+
Sbjct: 362 VISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK 407
Score = 169 (64.5 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 292 PNAWRISR-VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
PN ISR VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V PIS+
Sbjct: 353 PNG-AISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK 407
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 395 (144.1 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 76/139 (54%), Positives = 108/139 (77%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+LPI + + ++++ V N ++++IGETGSGK+TQ++Q L G+T G I TQPRRVAA
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAA 62
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVA+E LG++VGY IRFED T+S+T IKY+TDG+LLRE L + L++YSVI+
Sbjct: 63 VSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVII 122
Query: 254 LDEAHERTIHTDVLFDPTK 272
LDEAHER+++TD+L K
Sbjct: 123 LDEAHERSLNTDILLGLVK 141
Score = 242 (90.2 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 47/101 (46%), Positives = 69/101 (68%)
Query: 4 GQEEIDTACEILYERMKSLGP-DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
GQ++I+ L E+++SL + II P++ +LP EMQ R+F PP R+ +++TN
Sbjct: 222 GQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTN 281
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAETSLT+DG+ YV+D G+VKQ+ YN +GM SL V IS+
Sbjct: 282 IAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISK 322
Score = 149 (57.5 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
R +++TNIAETSLT+DG+ YV+D G+VKQ+ YN +GM SL V IS+
Sbjct: 275 RFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISK 322
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 402 (146.6 bits), Expect = 9.3e-49, Sum P(2) = 9.3e-49
Identities = 82/158 (51%), Positives = 113/158 (71%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQ 187
+ +QR++LPI++ + +L+ + + ++IGETGSGKTTQI QYL E G + I TQ
Sbjct: 74 VEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVTQ 133
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
PRRVAA+S+A RV++E LG+ VGYT+RF+D TS +T IK++TDGMLLRE + D L
Sbjct: 134 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLLR 193
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPL 285
YS I+LDEAHERT+HTDVLF K ++ K+ + L L
Sbjct: 194 KYSCIILDEAHERTLHTDVLFGVVKAAQ-KRRKELGKL 230
Score = 248 (92.4 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 51/116 (43%), Positives = 74/116 (63%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNI
Sbjct: 304 GQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNI 363
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
AETS+TI GI YVVD G VK K YN +G++ L V +S+ W++ G++ S
Sbjct: 364 AETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKT-QAWQRTGRAGREDS 418
Score = 137 (53.3 bits), Expect = 9.3e-49, Sum P(2) = 9.3e-49
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P +R +V+I+TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+
Sbjct: 351 PKGYR--KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 403
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 372 (136.0 bits), Expect = 2.4e-48, Sum P(2) = 2.4e-48
Identities = 81/169 (47%), Positives = 116/169 (68%)
Query: 114 GGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA 173
G + LTI +QR SLPIY+ + ++ + L++IG TG GK+TQI QYL
Sbjct: 34 GNDNFIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLF 93
Query: 174 EAGFTARGK-IGCTQPRRVAAMSVAKRVAEEFGCR-LGQEVGYTIRFEDCTSS-ETLIKY 230
E+G++ + I CTQPRRVAA+S+A+RVA+E G + +G+ VGY++RF++ S ET IKY
Sbjct: 94 ESGWSDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKY 153
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKN 279
+TDGML+RE ++D L YSVIM+DEAHER++ TD+L K + K+N
Sbjct: 154 VTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRN 202
Score = 249 (92.7 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 65/163 (39%), Positives = 98/163 (60%)
Query: 185 CTQPRRVAAMSVAKRVAEEFGCR-LGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLV 242
CTQPRRVAA+S+A+RVA+E G + +G+ VGY++RF++ S ET IKY+TDGML+RE ++
Sbjct: 106 CTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMML 165
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQ-----------RL---EPLYNK 288
D L YSVIM+DEAHER++ TD+L K + K+N +L N
Sbjct: 166 DPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNA 225
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 331
+ N + ++ + T L+I+G Y VD ++++ N
Sbjct: 226 NDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSN 268
Score = 201 (75.8 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 51/127 (40%), Positives = 76/127 (59%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGS--RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
+LP+YS L Q ++FE+ RK++I+TNIAETS+TIDG+ YVVD GFVK K Y+
Sbjct: 333 LLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYD 392
Query: 89 SKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNL-TIVEQRQSLPIYKLKHELIKA 147
S++G++SLV+ P S+ + G +S GK L T + + LP + E+ ++
Sbjct: 393 SESGLESLVIVPTSKSSANQRAGRAG--RSRAGKCYRLYTELTYEKLLPDQTIP-EIQRS 449
Query: 148 VSDNQIL 154
N IL
Sbjct: 450 NLTNTIL 456
Score = 165 (63.1 bits), Expect = 2.4e-48, Sum P(2) = 2.4e-48
Identities = 30/51 (58%), Positives = 44/51 (86%)
Query: 296 RISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+I +++I+TNIAETS+TIDG+ YVVD GFVK K Y+S++G++SLV+ P S+
Sbjct: 357 KIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSK 407
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 400 (145.9 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 78/140 (55%), Positives = 108/140 (77%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQ 187
+++ R+ LPIY K ++I+ +++NQ+ IVIGETGSGK+TQI Q+L IG TQ
Sbjct: 175 LLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPEN---PKMIGVTQ 231
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
PRRVAA S+A RV+EE+GC+LGQ+VGY +RF + T+ +T +KY+TDGMLLRE ++D +L
Sbjct: 232 PRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLT 291
Query: 248 NYSVIMLDEAHERTIHTDVL 267
YS I+LDEAHERTI TD++
Sbjct: 292 KYSTIILDEAHERTILTDLI 311
Score = 237 (88.5 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEID + L + L + P ++ LP+Y+AL Q++IFE P G RKV++ATNI
Sbjct: 398 GQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNI 457
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+T+ G+ YV+D G K KV+ G+ +L+ TPISQ
Sbjct: 458 AETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQ 497
Score = 136 (52.9 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V++ATNIAETS+T+ G+ YV+D G K KV+ G+ +L+ TPISQ
Sbjct: 450 KVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQ 497
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 401 (146.2 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 71/142 (50%), Positives = 112/142 (78%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR--GKIGC 185
+++ R++LP+Y+ K E++ + N + ++IGETGSGK+TQI Q++ E + + G I
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAV 133
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRRVAA+++A RVA+E GC+LG++VGY++RF++ T++ T +KY+TDGMLLRE +++ D
Sbjct: 134 TQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSD 193
Query: 246 LNNYSVIMLDEAHERTIHTDVL 267
L YSVI++DEAHERT+ TD++
Sbjct: 194 LREYSVIVIDEAHERTVLTDLI 215
Score = 204 (76.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 52/135 (38%), Positives = 76/135 (56%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILP--VYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEEID A I+ + K + + P +I+P +Y+ALP+ Q+ +F RKVV +T
Sbjct: 301 GQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFST 360
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
NIAETS+TI G+ +VVD G K KV+ + G+ +L+ PISQ ++ G++S G
Sbjct: 361 NIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQ-ASAMQRSGRAGRESE-G 418
Query: 122 KKTNLTIVEQRQSLP 136
K L LP
Sbjct: 419 KSFRLYCESDYVKLP 433
Score = 124 (48.7 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV +TNIAETS+TI G+ +VVD G K KV+ + G+ +L+ PISQ
Sbjct: 355 KVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQ 402
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 19 MKSL--GPDVPELIILPVYSALPSEMQTRIFEAAP 51
+KSL GP P+L I+ + + L +E + F AP
Sbjct: 219 LKSLIQGPR-PDLRIIVMSATLQAEKFSEFFNNAP 252
Score = 38 (18.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 14 ILYERMKSLGPDVPELI-ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDG 72
+ Y+ +KS D+ ++ LPVY E+ + I E+ P + I ET G
Sbjct: 62 LTYKSLKSRASDLLKMRETLPVYQH-KREIMSYI-ESNP-------VTVLIGETG---SG 109
Query: 73 IFYVVDPGFVKQKVYNSKTGMDSLVVT 99
+ P FV +K+Y++K S+ VT
Sbjct: 110 KSTQI-PQFVLEKLYDTKKH-GSIAVT 134
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 94/148 (63%), Positives = 122/148 (82%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG-KIGCTQPRR 190
R+SLP++ + EL+ A++++Q+LI+ GETGSGKTTQI QYL E G+T +G KI CTQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAAMSVA RVA E G +LG EVGY+IRFEDCTS T+++YMTDGMLLRE L + DL +YS
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 515
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 516 VVMVDEAHERTLHTDILFGLIKDVARFR 543
Score = 173 (66.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RK
Sbjct: 617 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 363 (132.8 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 73/158 (46%), Positives = 111/158 (70%)
Query: 114 GGKKSS----FGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQIT 169
GG++ S F N+ ++EQR+ LPI + + +++ + +Q++I++GETGSGK+TQ+
Sbjct: 22 GGEQQSSAFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVP 81
Query: 170 QYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIK 229
QYL E G+ +G IG T+PRRV+ +++A RVA+E G +G VGY +RF + SS T IK
Sbjct: 82 QYLYEWGWHTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIK 141
Query: 230 YMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+MT+G+LLRE L D L Y VI++DEAHER + TD++
Sbjct: 142 FMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMI 179
Score = 233 (87.1 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEE+ A ++L E + S + L +LP+Y ++ S Q +F P G+RKVV+ATNI
Sbjct: 270 GQEEVLEALDLLREYIAS--SEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNI 327
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TI GI YV+D G+VK K YN KT DSLV+ P+S+
Sbjct: 328 AETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSK 367
Score = 157 (60.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETS+TI GI YV+D G+VK K YN KT DSLV+ P+S+
Sbjct: 320 KVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSK 367
Score = 41 (19.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
LLRE + + N V+ + + T V F P K
Sbjct: 280 LLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPK 316
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 486 (176.1 bits), Expect = 1.9e-45, P = 1.9e-45
Identities = 105/191 (54%), Positives = 130/191 (68%)
Query: 109 KKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQI 168
KK GG+ SSF K T+ EQR+ LP + ++ +L++ + DNQ+++V+GETGSGKTTQ+
Sbjct: 165 KKQDEGGQ-SSFSKSK--TLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQL 221
Query: 169 TQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLI 228
TQ+L E G+ G IGCTQPRRVAAMSVAKRV+EE LG VGY IRFEDCT T I
Sbjct: 222 TQFLYEDGYAKFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAI 281
Query: 229 KYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNK 288
KYMTDG+LLRE LV DL+ YS I++DEAHER ++TDVL L K +R L
Sbjct: 282 KYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMG--LLKKILARRRDLKLIVT 339
Query: 289 YEEPNAWRISR 299
NA R SR
Sbjct: 340 SATMNAERFSR 350
Score = 324 (119.1 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 62/100 (62%), Positives = 79/100 (79%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ CE++ ER+K L D P+L ILP+YS +P+E Q +IFE A PG RKV++ATNI
Sbjct: 405 GQEDIEATCELVDERLKLLN-DPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNI 463
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +VVD G+ K KVYN K GMD+L +TPISQ
Sbjct: 464 AETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQ 503
Score = 185 (70.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 43/82 (52%), Positives = 54/82 (65%)
Query: 266 VLFDPTKLSKFK-KNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGF 324
+L DP KLS +Q K E A + +V++ATNIAETSLT+DGI +VVD G+
Sbjct: 422 LLNDPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGY 481
Query: 325 VKQKVYNSKTGMDSLVVTPISQ 346
K KVYN K GMD+L +TPISQ
Sbjct: 482 SKLKVYNPKMGMDTLQITPISQ 503
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 362 (132.5 bits), Expect = 8.2e-45, Sum P(2) = 8.2e-45
Identities = 74/129 (57%), Positives = 95/129 (73%)
Query: 158 GETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIR 217
GETGSGKTTQ+ QYL E G +G I TQPRRVAA+S+A RV++E LG+ VGYT+R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 218 FEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFK 277
F+D +S +T IK++TDGMLLRE + D L YS I+LDEAHERT+HTDVLF K ++ +
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRR 125
Query: 278 KNQ-RLEPL 285
+ + R PL
Sbjct: 126 RKELRKLPL 134
Score = 254 (94.5 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 52/116 (44%), Positives = 74/116 (63%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+IATNI
Sbjct: 206 GQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAPKGCRKVIIATNI 265
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
AETS+TI GI YVVD G VK K YN +G++ L V +S+ W++ G++ S
Sbjct: 266 AETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKT-QAWQRAGRAGREDS 320
Score = 137 (53.3 bits), Expect = 8.2e-45, Sum P(2) = 8.2e-45
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+IATNIAETS+TI GI YVVD G VK K YN +G++ L V +S+
Sbjct: 258 KVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 305
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 380 (138.8 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 74/144 (51%), Positives = 106/144 (73%)
Query: 125 NLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-I 183
+L I +QR LPI+K + ++ + +I++GETG GK+TQ+ Q+L EAG+ A G+ I
Sbjct: 67 SLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQI 126
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVD 243
TQPRRVA +++A RVAEE C LG +VGYT+RF+D + +T +K+MTDG+LLRE L D
Sbjct: 127 VITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILAD 186
Query: 244 LDLNNYSVIMLDEAHERTIHTDVL 267
L+ YS+IM+DEAHER+ +TD+L
Sbjct: 187 PLLSKYSIIMIDEAHERSCNTDIL 210
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/100 (42%), Positives = 67/100 (67%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQ+E++ CE L E +L + L ++P Y ALP+ Q + F++ P G+RKVV+ATNI
Sbjct: 305 GQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNI 363
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AE S+TI GI YV+D G+VK + ++ G+++L+ +S+
Sbjct: 364 AEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSK 403
Score = 119 (46.9 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAE S+TI GI YV+D G+VK + ++ G+++L+ +S+
Sbjct: 356 KVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSK 403
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 359 (131.4 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 74/158 (46%), Positives = 110/158 (69%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR------G 181
+ E R+ LPI ++ E+++A++ + +I+ G+TG GKTTQ+ Q+L EAGF ++ G
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
IG TQPRRVA ++ AKRVA E G RLG+EVG+ +R++ + IK+MTDG+LLRE
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLFDP-TKLSKFKK 278
D L YSVI+LDEAHER+++TD+L T++ K ++
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQ 391
Score = 191 (72.3 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 28 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVY 87
+L +LP+Y+ L Q R+FE R VV+ATN+AETSLTI GI YVVD G VK K Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 88 NSKTGMDSLVVTPISQ 103
+SKTGM+S V ISQ
Sbjct: 706 DSKTGMESYEVDWISQ 721
Score = 147 (56.8 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 41/81 (50%), Positives = 46/81 (56%)
Query: 268 FDPTKLSKFKKNQRLEPL--YNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFV 325
F P KL L P +EE VV+ATN+AETSLTI GI YVVD G V
Sbjct: 642 FSPGKLRVLPLYAMLSPAAQLRVFEEVEKEE-RLVVVATNVAETSLTIPGIKYVVDTGRV 700
Query: 326 KQKVYNSKTGMDSLVVTPISQ 346
K K Y+SKTGM+S V ISQ
Sbjct: 701 KVKNYDSKTGMESYEVDWISQ 721
Score = 46 (21.3 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 2 VKGQEEIDTACEILYERMKSL 22
V GQ E+D CE L + K L
Sbjct: 490 VTGQREVDYLCEKLRKSSKEL 510
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 325 (119.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 70/118 (59%), Positives = 88/118 (74%)
Query: 168 ITQYLAEAGFTARGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-E 225
+ +YLAEAG+TA G++ G TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT
Sbjct: 56 VFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA 115
Query: 226 TLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T IK++TDGML+RE +VD L YSVIMLDEAHERT++TD+ K + K + + RL
Sbjct: 116 TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 173
Score = 248 (92.4 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 57/135 (42%), Positives = 82/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++L + L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 252 GQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 311
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ ++ GG+ S G
Sbjct: 312 NVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASAN-QRAGRGGRSRS-G 369
Query: 122 KKTNLTIVEQRQSLP 136
K L E LP
Sbjct: 370 KCYRLYTEEAFDKLP 384
Score = 168 (64.2 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 276 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 335
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 336 AYNPRTAIECLVVVPVSQ 353
Score = 50 (22.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI 183
L+I +QRQ LP++K L +A G T G+ +TQ A T G++
Sbjct: 45 LSIEQQRQKLPVFKY---LAEA----------GWTAEGRVVGVTQPRRVAAVTVAGRV 89
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 450 (163.5 bits), Expect = 5.7e-42, P = 5.7e-42
Identities = 86/156 (55%), Positives = 118/156 (75%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
K+++ T + + LPIY+ K +L++AV +N LIV GETGSGKTTQ+ QYL +AG + G
Sbjct: 5 KRSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNG 64
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
+IG TQPRRVAA++VA+RV+ E RLG+EVGY +RF+DC++ +T+IKYMTDG LLRE L
Sbjct: 65 RIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREIL 124
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFK 277
D L YS+++LDEAHER+++TDVL K + K
Sbjct: 125 ADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLK 160
Score = 257 (95.5 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 55/107 (51%), Positives = 76/107 (71%)
Query: 4 GQEEIDTACEILYERMKSLGP--DVPE-----LIILPVYSALPSEMQTRIFEAAPPGSRK 56
GQ EI+ AC++L+E+ + L DV + L+IL +Y ++P++ Q +IF+ AP G RK
Sbjct: 246 GQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPAPKGVRK 305
Query: 57 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
V+ATNIA TSLTIDGI Y+VD GFVKQ +NS+ G+D L V PIS+
Sbjct: 306 CVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISK 352
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 58/210 (27%), Positives = 103/210 (49%)
Query: 140 LKHELIKAVSDNQI-LIVIGETGSGKTTQITQYLAEAG-FTARGKIGCTQPRRVAAMSVA 197
LK L+K N+ L V+ + + +T +++ + FT G+ T P + ++
Sbjct: 154 LKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPGR---TYPVKETFCNLI 210
Query: 198 KRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLD-E 256
+E + + V T+ ++ ++ ++T G E DL ++ +
Sbjct: 211 GPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFLT-GQSEIEKACDLLFEKAEILDYRYD 269
Query: 257 AHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGI 316
H+R++ D L + +Q+ + ++ +P + + V+ATNIA TSLTIDGI
Sbjct: 270 VHDRSV--DGLLILSLYGSMPTDQQRQ-IF----QPAPKGVRKCVVATNIAATSLTIDGI 322
Query: 317 FYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
Y+VD GFVKQ +NS+ G+D L V PIS+
Sbjct: 323 RYIVDSGFVKQLNHNSRVGLDILEVVPISK 352
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 369 (135.0 bits), Expect = 7.0e-42, Sum P(2) = 7.0e-42
Identities = 74/146 (50%), Positives = 103/146 (70%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR------G 181
I + R LP++ +H++++A+ N ++I+ GETGSGKTTQ+ Q+L EAGF A G
Sbjct: 384 IQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPG 443
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
+G TQPRRVAA+S+A+RVA E G G +VGY IRF+ +T +K+MTDG+LLRE +
Sbjct: 444 MVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM 502
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
D L YS I++DEAHER I+TD+L
Sbjct: 503 HDFKLTKYSSIIIDEAHERNINTDIL 528
Score = 196 (74.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 43/101 (42%), Positives = 64/101 (63%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE-LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
G++E D E +E + + G + L +LP+YS LP++ Q R+F+ P GSR ++ATN
Sbjct: 704 GEDEEDEE-EEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATN 762
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
+AETSLTI G+ YVVD G K++ YN G+ S V +S+
Sbjct: 763 VAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSK 803
Score = 117 (46.2 bits), Expect = 7.0e-42, Sum P(2) = 7.0e-42
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 298 SRV-VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
SR+ ++ATN+AETSLTI G+ YVVD G K++ YN G+ S V +S+
Sbjct: 754 SRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSK 803
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 365 (133.5 bits), Expect = 8.6e-42, Sum P(2) = 8.6e-42
Identities = 75/143 (52%), Positives = 100/143 (69%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR------GKIGC 185
R +LPI +H +++ + DN ++I+ GETGSGKTTQ+ Q+L E+GF R G IG
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGV 461
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFED-CTSSETLIKYMTDGMLLRECLVDL 244
TQPRRVAA+S AKRVAEE G+EVGY IR++ SS IK+MTDG+L+RE D
Sbjct: 462 TQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L+ YS I++DEAHER ++TD+L
Sbjct: 522 LLSQYSSILIDEAHERNLNTDIL 544
Score = 200 (75.5 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 43/79 (54%), Positives = 52/79 (65%)
Query: 20 KSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDP 79
K GP L +LP+YS LP+ Q R+F+ P GSR VV+ATN+AETSLTI I YVVD
Sbjct: 841 KPAGP----LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDT 896
Query: 80 GFVKQKVYNSKTGMDSLVV 98
G VKQ+ YN G+ S V
Sbjct: 897 GRVKQRYYNKDNGISSFEV 915
Score = 122 (48.0 bits), Expect = 8.6e-42, Sum P(2) = 8.6e-42
Identities = 26/42 (61%), Positives = 30/42 (71%)
Query: 300 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVV 341
VV+ATN+AETSLTI I YVVD G VKQ+ YN G+ S V
Sbjct: 874 VVVATNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEV 915
Score = 37 (18.1 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 137 IYKLKHELIKAVSD-NQ 152
I+KL+H+L + V+ NQ
Sbjct: 1158 IHKLRHQLTEIVNSINQ 1174
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 446 (162.1 bits), Expect = 1.2e-41, P = 1.2e-41
Identities = 101/232 (43%), Positives = 148/232 (63%)
Query: 125 NLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI- 183
+L+I +QRQ LP++KL++ ++ V Q L+++GETG GK+TQI QYLAEAG+TA G++
Sbjct: 44 SLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVV 103
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSE-TLIKYMTDGMLLRECLV 242
G TQPRRVAA+SVA RVA+E G LG EVGY IRF+DCT + T IK++TDGML+RE +
Sbjct: 104 GVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMA 163
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWR--ISRV 300
D L YSV+MLDEAHERT++TD+ K + K+ + + + +R ++
Sbjct: 164 DPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQN 223
Query: 301 VIATNIAETS--LTIDGIFYVVDPGFVKQKV--YNSKTGMDSLVVTPISQDG 348
+TS LT++G + VD +++ V Y T ++ + + DG
Sbjct: 224 DTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDG 275
Score = 241 (89.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 57/137 (41%), Positives = 82/137 (59%)
Query: 4 GQEEIDTACEILYERMKSLGPDV--PELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++L L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN KT ++ LVV P+S+ + G +S G
Sbjct: 343 NVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRS--G 400
Query: 122 KKTNL-TIVEQR-QSLP 136
K L T E+ + LP
Sbjct: 401 KCYRLYTATEEDFEKLP 417
Score = 165 (63.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 277 KKNQRLEPLYNKYEEPNAW----RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
+K+ R+ P+Y P+ R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 307 RKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN KT ++ LVV P+S+
Sbjct: 367 AYNPKTAIECLVVVPVSK 384
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 90/153 (58%), Positives = 112/153 (73%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+ PI K + ++I+AV DN LIV G TGSGKTTQ+ +YL EAGF+ G IG TQPR+VAA
Sbjct: 32 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 91
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L D +L +SVI+
Sbjct: 92 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 151
Query: 254 LDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
LDEAHERT+ TD+LF K L + K R E L
Sbjct: 152 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 184
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 349 (127.9 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 71/141 (50%), Positives = 104/141 (73%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTA-RGKIGCT 186
I E R LPI + +++A+++N I+++ GETGSGKTTQ+ Q+L EAG+T+ G IG T
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
+PRRVAA+S+++RVA+E + V Y IR+E T+ ET IK+MTDG+LL+E D L
Sbjct: 295 EPRRVAAVSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFLL 353
Query: 247 NNYSVIMLDEAHERTIHTDVL 267
+ Y VI++DEAHER+++TD+L
Sbjct: 354 SKYKVIIIDEAHERSMYTDIL 374
Score = 201 (75.8 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
L +LP+YS L E Q ++F PPG+R V+ATN+AETSLTI GI YVVD G VK++ Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 89 SKTGMDSLVVTPISQ 103
TG+ S VT ISQ
Sbjct: 637 KITGVSSFRVTWISQ 651
Score = 130 (50.8 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
V+ATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT ISQ
Sbjct: 606 VVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRVTWISQ 651
Score = 49 (22.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 239 ECLVDLDLNNYSVIMLDEAHE-RTIHTD 265
+ L ++L+NY+V+ +DE E R TD
Sbjct: 521 QTLPRINLDNYAVVPVDEGDEDRDAETD 548
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 439 (159.6 bits), Expect = 6.8e-41, P = 6.8e-41
Identities = 99/221 (44%), Positives = 142/221 (64%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ V + Q ++++GETG GK+TQI QYLAEAG+TA G++ G
Sbjct: 37 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 96
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 97 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 156
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKN-------------QRLEPLYNKYE 290
L YS IMLDEAHERT++TD+ K + K+ ++ +N+ E
Sbjct: 157 PLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNE 216
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDP--GFVKQKV 329
+ R + V++ + + +D IFY+ P ++K V
Sbjct: 217 TSDPTRDTCVILT--VEGRTFPVD-IFYLQSPVPDYIKSTV 254
Score = 250 (93.1 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 57/135 (42%), Positives = 81/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++LG + L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 275 GQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 334
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ + G +S G
Sbjct: 335 NVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRS--G 392
Query: 122 KKTNLTIVEQRQSLP 136
K L E LP
Sbjct: 393 KCYRLYTEEAFDKLP 407
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 299 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 358
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 359 AYNPRTTIECLVVAPVSQ 376
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 439 (159.6 bits), Expect = 7.1e-41, P = 7.1e-41
Identities = 99/221 (44%), Positives = 142/221 (64%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-G 184
L+I +QRQ LP++KL++ ++ V + Q ++++GETG GK+TQI QYLAEAG+TA G++ G
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLVD 243
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE +VD
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVD 164
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKN-------------QRLEPLYNKYE 290
L YS IMLDEAHERT++TD+ K + K+ ++ +N+ E
Sbjct: 165 PLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNE 224
Query: 291 EPNAWRISRVVIATNIAETSLTIDGIFYVVDP--GFVKQKV 329
+ R + V++ + + +D IFY+ P ++K V
Sbjct: 225 TSDPTRDTCVILT--VEGRTFPVD-IFYLQSPVPDYIKSTV 262
Score = 250 (93.1 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 57/135 (42%), Positives = 81/135 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
GQEE++T +L E+ ++LG + L +LP+Y+ LPS Q ++FE RKV++AT
Sbjct: 283 GQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
N+AETS+TI GI YV+D GFVK + YN +T ++ LVV P+SQ + G +S G
Sbjct: 343 NVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRS--G 400
Query: 122 KKTNLTIVEQRQSLP 136
K L E LP
Sbjct: 401 KCYRLYTEEAFDKLP 415
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 277 KKNQRLEPLYN---KYEEPNAW-RISR----VVIATNIAETSLTIDGIFYVVDPGFVKQK 328
K++ R+ P+Y +E+ + R+SR V++ATN+AETS+TI GI YV+D GFVK +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 329 VYNSKTGMDSLVVTPISQ 346
YN +T ++ LVV P+SQ
Sbjct: 367 AYNPRTTIECLVVAPVSQ 384
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 344 (126.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 68/134 (50%), Positives = 94/134 (70%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+LP+ ++ ++ KA+S NQ++I+ GETGSGKTTQ+ + E G +RG IG TQPRR+AA
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
SVA RVAEE LG+ VG+ +RF D SE+ IK MTDG+LL E D L+ Y I+
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 254 LDEAHERTIHTDVL 267
+DEAHER+++ D +
Sbjct: 195 IDEAHERSLNIDFI 208
Score = 157 (60.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+ G+ EI E L R + + ILP+Y+ L Q+++F + R++V+AT
Sbjct: 295 MNGEREIRDTAEQLNRR------NYRDTEILPLYARLSYGEQSKVFSSHT--GRRIVLAT 346
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
N+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 347 NVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQ 388
Score = 130 (50.8 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
R+V+ATN+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 341 RIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQ 388
Score = 37 (18.1 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 256 EAHE-RTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
EA E ++ D+L D L F + + E +YN + + W+ +R
Sbjct: 772 EALEHKSRRRDILVDEQVLMDFYEPRIPEGIYNAPKFFSWWKEAR 816
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 344 (126.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 68/134 (50%), Positives = 94/134 (70%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+LP+ ++ ++ KA+S NQ++I+ GETGSGKTTQ+ + E G +RG IG TQPRR+AA
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
SVA RVAEE LG+ VG+ +RF D SE+ IK MTDG+LL E D L+ Y I+
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 254 LDEAHERTIHTDVL 267
+DEAHER+++ D +
Sbjct: 195 IDEAHERSLNIDFI 208
Score = 157 (60.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+ G+ EI E L R + + ILP+Y+ L Q+++F + R++V+AT
Sbjct: 295 MNGEREIRDTAEQLNRR------NYRDTEILPLYARLSYGEQSKVFSSHT--GRRIVLAT 346
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
N+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 347 NVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQ 388
Score = 130 (50.8 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
R+V+ATN+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 341 RIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQ 388
Score = 37 (18.1 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 256 EAHE-RTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISR 299
EA E ++ D+L D L F + + E +YN + + W+ +R
Sbjct: 772 EALEHKSRRRDILVDEQVLMDFYEPRIPEGIYNAPKFFSWWKEAR 816
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 331 (121.6 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 69/146 (47%), Positives = 96/146 (65%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
+K + +E LP+ + + ++ +A++ +Q++IV GETGSGKTTQ+ + AE G G
Sbjct: 74 RKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG 133
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
IG TQPRR+AA SVA R+AEE LG VGY +RF D S +T IK MTDG+LL E
Sbjct: 134 LIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQ 193
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
D LN Y I++DEAHER+++ D +
Sbjct: 194 NDRFLNQYDTIIIDEAHERSLNIDFI 219
Score = 168 (64.2 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 38/102 (37%), Positives = 62/102 (60%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+ G+ EI + L +R ++ + I+P+Y+ L + Q +IF+ P R++V+AT
Sbjct: 308 MNGEREIRDTADALSKR------NLRDTEIVPLYARLSAGEQNKIFQ--PHAGRRIVLAT 359
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
N+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 360 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
Score = 143 (55.4 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 287 NKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
NK +P+A R R+V+ATN+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 344 NKIFQPHAGR--RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 331 (121.6 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 69/146 (47%), Positives = 96/146 (65%)
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
+K + +E LP+ + + ++ +A++ +Q++IV GETGSGKTTQ+ + AE G G
Sbjct: 74 RKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG 133
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
IG TQPRR+AA SVA R+AEE LG VGY +RF D S +T IK MTDG+LL E
Sbjct: 134 LIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQ 193
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
D LN Y I++DEAHER+++ D +
Sbjct: 194 NDRFLNQYDTIIIDEAHERSLNIDFI 219
Score = 168 (64.2 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 38/102 (37%), Positives = 62/102 (60%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+ G+ EI + L +R ++ + I+P+Y+ L + Q +IF+ P R++V+AT
Sbjct: 308 MNGEREIRDTADALSKR------NLRDTEIVPLYARLSAGEQNKIFQ--PHAGRRIVLAT 359
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
N+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 360 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
Score = 143 (55.4 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 287 NKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
NK +P+A R R+V+ATN+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 344 NKIFQPHAGR--RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 351 (128.6 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 85/201 (42%), Positives = 124/201 (61%)
Query: 116 KKSSFGKKTNLT--IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA 173
++ +F + N T I +QR LP++ +H +++AV + +I+ GETGSGKTTQ+ Q+L
Sbjct: 422 QRRAFVVEVNRTDSIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLY 481
Query: 174 EAGF------TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSE-- 225
EAGF G IG TQPRRVAA+S+A+RV E G G VGY IRF+ +E
Sbjct: 482 EAGFGNLLHDLYPGMIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGK 540
Query: 226 ---TLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDP-TKLSKFKKNQR 281
T +K+MTDG+LLRE + D L YS I++DEAHER I+TD+L T++ K ++
Sbjct: 541 ENGTALKFMTDGVLLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRK-- 598
Query: 282 LEPLYNKYEEPNAWRISRVVI 302
Y+K E P ++ +++I
Sbjct: 599 ----YHK-ENPQLYKPLKLII 614
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 45/98 (45%), Positives = 63/98 (64%)
Query: 6 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAE 65
EE + E E + S +V L +LP+YS LP++ Q ++FE PPGSR ++ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 66 TSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TSLTI GI YVVD G K++ YN + G+ S V +S+
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSK 845
Score = 121 (47.7 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 289 YEEPNAWRISRV-VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+E+P SR+ ++ATN+AETSLTI GI YVVD G K++ YN + G+ S V +S+
Sbjct: 789 FEDPPPG--SRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSK 845
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 336 (123.3 bits), Expect = 4.9e-40, Sum P(2) = 4.9e-40
Identities = 70/140 (50%), Positives = 102/140 (72%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-GCTQP 188
E+R LPI + +++AV+++ I+IV GETGSGKTTQ+ Q+L EAGF++ I G T+P
Sbjct: 34 EERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEP 93
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEV-GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
RRVAA+++++RVA+E L Q V Y IR+E + ET IK+MTDG+LL+E D L
Sbjct: 94 RRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 151
Query: 248 NYSVIMLDEAHERTIHTDVL 267
Y V+++DEAHER+++TD+L
Sbjct: 152 RYKVVIIDEAHERSVYTDIL 171
Score = 192 (72.6 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 24 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFV 82
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD G V
Sbjct: 369 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 428
Query: 83 KQKVYNSKTGMDSLVVTPISQ 103
K++ Y+ TG+ S VT +SQ
Sbjct: 429 KKRYYDRVTGVSSFRVTWVSQ 449
Score = 129 (50.5 bits), Expect = 4.9e-40, Sum P(2) = 4.9e-40
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
V+ATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT +SQ
Sbjct: 404 VVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQ 449
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 239 ECLVDLDLNNYSVIMLDEAHE 259
E L ++L++YSV+ E E
Sbjct: 317 EVLPQINLDHYSVLPAGEGDE 337
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 282 (104.3 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 54/75 (72%), Positives = 65/75 (86%)
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
MSVAKRV+EE G LG+EVGY IRFEDCTS TLIKYMTDG+LLRE L + DL++YS I+
Sbjct: 1 MSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 60
Query: 254 LDEAHERTIHTDVLF 268
+DEAHER+++TDVLF
Sbjct: 61 MDEAHERSLNTDVLF 75
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 51/100 (51%), Positives = 74/100 (74%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE+I+ + + E ++ L + P L +LP+YS LPS++Q +IF+ AP G RK ++ATNI
Sbjct: 159 GQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNI 217
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 218 AETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 257
Score = 159 (61.0 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + ++ATNIAETSLT+DGI +V+D G+ K KV+N + GMD+L + PISQ
Sbjct: 208 VRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 257
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 336 (123.3 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 70/140 (50%), Positives = 102/140 (72%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-GCTQP 188
E+R LPI + +++AV+++ I+IV GETGSGKTTQ+ Q+L EAGF++ I G T+P
Sbjct: 247 EERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEP 306
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEV-GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
RRVAA+++++RVA+E L Q V Y IR+E + ET IK+MTDG+LL+E D L
Sbjct: 307 RRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 364
Query: 248 NYSVIMLDEAHERTIHTDVL 267
Y V+++DEAHER+++TD+L
Sbjct: 365 RYKVVIIDEAHERSVYTDIL 384
Score = 192 (72.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 24 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFV 82
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD G V
Sbjct: 582 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 641
Query: 83 KQKVYNSKTGMDSLVVTPISQ 103
K++ Y+ TG+ S VT +SQ
Sbjct: 642 KKRYYDRVTGVSSFRVTWVSQ 662
Score = 129 (50.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
V+ATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT +SQ
Sbjct: 617 VVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQ 662
Score = 37 (18.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 239 ECLVDLDLNNYSVIMLDEAHE 259
E L ++L++YSV+ E E
Sbjct: 530 EVLPQINLDHYSVLPAGEGDE 550
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 354 (129.7 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 72/154 (46%), Positives = 103/154 (66%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRV 191
R LPI ++ +L+ ++ + LIVIGETGSGK+TQ+ Q AG G I TQPRRV
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217
Query: 192 AAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSV 251
AA+S+A RVA E G +G VGY +RFE+ T +T I+YMTDG++LR+ LV L+ YS
Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277
Query: 252 IMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPL 285
+++DEAHER++H+DVL + + ++ + PL
Sbjct: 278 VIIDEAHERSLHSDVLMCILRQCQDQRRETNNPL 311
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 43/100 (43%), Positives = 58/100 (58%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G EEI+ L E SL L+ +P+Y+AL E Q F P G+RKV+I+TNI
Sbjct: 389 GSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNI 448
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TI GI V+D G VK K + + +D L V +S+
Sbjct: 449 AETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSK 488
Score = 104 (41.7 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 265 DVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGF 324
DVL P L + ++ + + K P R +V+I+TNIAETS+TI GI V+D G
Sbjct: 412 DVLM-PVPLYAALRPEKQKEAFRK--TPQGAR--KVIISTNIAETSVTIPGIRVVIDSGK 466
Query: 325 VKQKVYNSKTGMDSLVVTPISQ 346
VK K + + +D L V +S+
Sbjct: 467 VKTKRFEAFNRIDVLKVHNVSK 488
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 427 (155.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 83/155 (53%), Positives = 115/155 (74%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRR 190
Q++SLP++ K L+K ++ +I+I ETG+GKTTQI QYL E G+ G I TQPRR
Sbjct: 69 QKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRR 128
Query: 191 VAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYS 250
VAA+S++KRV++E G LG +VGY +RF+D T+ +T +KYMTDGML+RE ++D L+ YS
Sbjct: 129 VAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYS 188
Query: 251 VIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPL 285
VI+LDEAHERT++TDVLF K S K+ ++ PL
Sbjct: 189 VIILDEAHERTLNTDVLFGLLK-SIQKRREKKNPL 222
Score = 277 (102.6 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 54/100 (54%), Positives = 75/100 (75%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G++EI+ ++L +R+ L +LI+ P++SALP E Q ++FE AP GSRKV++ATNI
Sbjct: 305 GRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNI 364
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YVVD G VK K++N K G+DSL + PIS+
Sbjct: 365 AETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISK 404
Score = 166 (63.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 41/103 (39%), Positives = 64/103 (62%)
Query: 245 DLNNYSVIMLDEAHERTIHT-DVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIA 303
++ N ++LD + + D++ P S + Q+++ ++ K P R +V++A
Sbjct: 308 EIENLEKLLLDRIPRLPVGSKDLIVCPI-FSALPQEQQMK-VFEK--APKGSR--KVILA 361
Query: 304 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
TNIAETSLTI+GI YVVD G VK K++N K G+DSL + PIS+
Sbjct: 362 TNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISK 404
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 330 (121.2 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 70/141 (49%), Positives = 97/141 (68%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-GCT 186
I E R LP+ + +++AV D++ +++ GETGSGKTTQ+ Q+L EAGF + G I G T
Sbjct: 245 IQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVT 304
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
+PRRVAA+S++ RVA E G V Y IR+E + T IK MTDG+LL+E D L
Sbjct: 305 EPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLL 363
Query: 247 NNYSVIMLDEAHERTIHTDVL 267
YSVI++DEAHER+++TD+L
Sbjct: 364 QKYSVIIIDEAHERSVYTDIL 384
Score = 206 (77.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 44/80 (55%), Positives = 55/80 (68%)
Query: 24 PDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVK 83
P +P L +LP+YS L E Q ++F P GSR V+ATN+AETSLTI GI YVVD G VK
Sbjct: 576 PSIP-LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVK 634
Query: 84 QKVYNSKTGMDSLVVTPISQ 103
++ Y+ TG+ S VT ISQ
Sbjct: 635 KRFYDRVTGVSSFKVTWISQ 654
Score = 132 (51.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 298 SRV-VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
SR+ V+ATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT ISQ
Sbjct: 605 SRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKVTWISQ 654
Score = 42 (19.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 195 SVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIML 254
SV +R+ + F + +E +T D +E +K L ++L+NYS + +
Sbjct: 484 SVCRRLRKAFPYKPNRE--HT----DMMETEEDLKKSKRAKKKNVSLPRINLDNYSALPV 537
Query: 255 DEAHE 259
DE E
Sbjct: 538 DEGDE 542
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 335 (123.0 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 71/170 (41%), Positives = 104/170 (61%)
Query: 109 KKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQI 168
++H++ + K +L + + LPI + ++ A+ NQ++I+ GETGSGKTTQI
Sbjct: 73 QQHILRSIQDKQQKIRSLPKITYPEGLPISENAAQISAAIDANQVVIIAGETGSGKTTQI 132
Query: 169 TQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLI 228
+ E G G IG TQPRR+AA +VA R+AEE G +LG++VGY +RF D S ++ I
Sbjct: 133 PKICLELGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYI 192
Query: 229 KYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKK 278
K MTDG+LL E D L Y I++DEAHER+++ D + K K+
Sbjct: 193 KLMTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKR 242
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 2 VKGQEEI-DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ G+ EI DTA ++ ++ +LP+Y+ L Q +IF+ P R +V+A
Sbjct: 331 LNGEREIRDTAAALVKANLRHTN-------VLPLYARLTVSEQNQIFK--PHSGRNIVLA 381
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TN+AETSLT+ GI YV+DPG + Y+ +T + L + P+SQ
Sbjct: 382 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQ 424
Score = 129 (50.5 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 287 NKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
N+ +P++ R +V+ATN+AETSLT+ GI YV+DPG + Y+ +T + L + P+SQ
Sbjct: 367 NQIFKPHSGR--NIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQ 424
Score = 38 (18.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 227 LIKYMT---DGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSK 275
L+KY T D R +D L I++ + I T DP + +K
Sbjct: 210 LLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAK 261
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 332 (121.9 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 69/140 (49%), Positives = 102/140 (72%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-GCTQP 188
E+R LPI + +++AV+++ I+IV GETGSGKTTQ+ Q+L EAG+++ I G T+P
Sbjct: 241 EERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGITEP 300
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEV-GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
RRVAA+++++RVA+E L Q V Y IR+E + ET IK+MTDG+LL+E D L
Sbjct: 301 RRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 358
Query: 248 NYSVIMLDEAHERTIHTDVL 267
Y V+++DEAHER+++TD+L
Sbjct: 359 RYKVVLIDEAHERSVYTDIL 378
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 24 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFV 82
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD G V
Sbjct: 576 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 635
Query: 83 KQKVYNSKTGMDSLVVTPISQ 103
K++ Y+ TG+ S VT +SQ
Sbjct: 636 KKRHYDRVTGVSSFRVTWVSQ 656
Score = 127 (49.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
V+ATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT +SQ
Sbjct: 611 VVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSSFRVTWVSQ 656
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 301 (111.0 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 63/104 (60%), Positives = 77/104 (74%)
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
IG TQPR+VAA+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYMTDG LL+ L
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
D +L +SVI+LDEAHERT+ TD+LF K L + K R E L
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 105
Score = 182 (69.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 39/61 (63%), Positives = 45/61 (73%)
Query: 43 QTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPIS 102
Q RIF PPG RK VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 103 Q 103
+
Sbjct: 339 K 339
Score = 145 (56.1 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I + VI+TNI+ TSLTIDGI YVVD GFVKQ +N + G+D L V PIS+
Sbjct: 290 IRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISK 339
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 408 (148.7 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 81/147 (55%), Positives = 110/147 (74%)
Query: 135 LPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQPRRVAA 193
LPI + K L+ V N + +V+G+TGSGKTTQI Q+L +AG+ + GK IG TQPRR+AA
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+VA RVAEE+G +G+EVGY+IRFED TS T IK++TDG+L+RE LVD L+ YS++M
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSIVM 140
Query: 254 LDEAHERTIHTDVLFDPTKLSKFKKNQ 280
+DEAHER++ TD+L L K +K +
Sbjct: 141 VDEAHERSVSTDILLG--LLKKIRKKR 165
Score = 240 (89.5 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G++EI+ A + + ER L L+ LP++S L +E Q IFE AP +RKV+ +TNI
Sbjct: 255 GRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVIFSTNI 314
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AE S+TI GI YVVD GFVK + YN KTG+++L PIS+
Sbjct: 315 AEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISK 354
Score = 157 (60.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 254 LDEAHERTIH-TDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLT 312
+D ERT H T L F + +Y E P R +V+ +TNIAE S+T
Sbjct: 263 VDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTR--KVIFSTNIAEASVT 320
Query: 313 IDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I GI YVVD GFVK + YN KTG+++L PIS+
Sbjct: 321 ISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISK 354
Score = 51 (23.0 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 168 ITQYLAEAGFTARGKIGC-TQPRRVAAMSVAKRVAEEFGCRLGQEV--GYTIRFEDCTSS 224
+T+ E+GF + T R V+ + KR E FG R+ + + G T +
Sbjct: 527 VTKGRKESGFCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTG 586
Query: 225 ETLIKYMTDGMLLRECLVDLD 245
E + + +T G + D
Sbjct: 587 EQIRRCLTTGYFAHAARMQAD 607
Score = 50 (22.7 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKV-VI 59
MV E + +IL +K + PEL I+ + L +E F + GSR+
Sbjct: 140 MVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDREE 199
Query: 60 ATNIAETSLTIDGIFYVVD 78
T ++++G Y +D
Sbjct: 200 PQGTIGTIVSLEGRTYPID 218
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 339 (124.4 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 68/139 (48%), Positives = 96/139 (69%)
Query: 129 VEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQP 188
+E + LP+ + + E+ +A+ NQ++IV GETGSGKTTQ+ + EAG +G IG TQP
Sbjct: 68 LEYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQP 127
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNN 248
RR+AA SVA R+A+E LG+ VGY +RF D T ++LIK MTDG+LL E D L+
Sbjct: 128 RRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQ 187
Query: 249 YSVIMLDEAHERTIHTDVL 267
Y +++DEAHER+++ D L
Sbjct: 188 YDTLIVDEAHERSLNIDFL 206
Score = 148 (57.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 39/103 (37%), Positives = 61/103 (59%)
Query: 2 VKGQEEI-DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
+ G+ EI DTA E ++ P E +LP+YS L Q +IF+ P G R++V+A
Sbjct: 297 LSGEREIRDTA-----ESLRKHHPADCE--VLPLYSRLTVSEQEKIFK--PHGRRRIVLA 347
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TN+AETSLT+ GI V+D G+ + Y+ ++ + L + IS+
Sbjct: 348 TNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISR 390
Score = 104 (41.7 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
K +P+ R R+V+ATN+AETSLT+ GI V+D G+ + Y+ ++ + L + IS+
Sbjct: 334 KIFKPHGRR--RIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISR 390
Score = 53 (23.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 19/87 (21%), Positives = 37/87 (42%)
Query: 94 DSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKA---VSD 150
D + + + D E ++H+ G K + + L+ + R+ I++ E++K +
Sbjct: 549 DFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILEVVKGELGLRP 608
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGF 177
NQ+ GE +T L GF
Sbjct: 609 NQVPADYGEI---HRALLTGLLCHVGF 632
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 307 (113.1 bits), Expect = 2.8e-37, Sum P(2) = 2.8e-37
Identities = 62/135 (45%), Positives = 93/135 (68%)
Query: 133 QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVA 192
+ LP+Y K +++ A++ + +++V TGSGKTTQ+ L EAG+ G IG TQPRR+A
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64
Query: 193 AMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVI 252
+SV++ +A++ VGY +RFED T ET IK MTDG+LL+E +D L+ YS+I
Sbjct: 65 VLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSII 124
Query: 253 MLDEAHERTIHTDVL 267
M+DEAHER+++ D +
Sbjct: 125 MVDEAHERSLNIDFI 139
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 28 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVY 87
+L +LP+Y L E Q ++F AP G RKVVIATNIAETS+TID + V+D G VK Y
Sbjct: 253 KLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSY 312
Query: 88 NSKTGMDSLVVTPISQ 103
N + SL TPISQ
Sbjct: 313 NPLSYTASLDETPISQ 328
Score = 126 (49.4 bits), Expect = 2.8e-37, Sum P(2) = 2.8e-37
Identities = 38/90 (42%), Positives = 50/90 (55%)
Query: 257 AHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGI 316
+HER LF + K ++ E ++N+ P R +VVIATNIAETS+TID +
Sbjct: 246 SHERWFRK--LFLLPLYGRLSKEEQ-EQVFNR--APFGKR--KVVIATNIAETSITIDDV 298
Query: 317 FYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
V+D G VK YN + SL TPISQ
Sbjct: 299 TTVIDSGLVKLNSYNPLSYTASLDETPISQ 328
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 321 (118.1 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 64/153 (41%), Positives = 100/153 (65%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
G+K +FG+ L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL
Sbjct: 144 GQKQAFGRLAKLQ--RERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 201
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
AGF+ + CTQPRR+A +S+AKRV E + G +VGY IRFE S+ T I ++T G
Sbjct: 202 AGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVG 258
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+LLR+ + L Y V+++DE HER +H D L
Sbjct: 259 LLLRQIQREPSLPQYEVLIVDEVHERHLHNDFL 291
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 46 IFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDL 105
+F+ APPG RK +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 106 PEWKK 110
E +K
Sbjct: 400 AEQRK 404
Score = 106 (42.4 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 348 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 397
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 299 (110.3 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 59/134 (44%), Positives = 88/134 (65%)
Query: 135 LPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAM 194
LPIY + +++K + QI+++IGETGSGK+TQ+ Q+LA++G A I CTQPR++AAM
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 195 SVAKRVAEEF-GCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
++A RV EE GC V T F + + YMTD LL+ + D L+ S ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 254 LDEAHERTIHTDVL 267
+DEAHER+++TD+L
Sbjct: 426 IDEAHERSLNTDLL 439
Score = 188 (71.2 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 45/99 (45%), Positives = 57/99 (57%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 64
Q E++ ACE P I LP++ L E Q R+F+ P G RKV+ ATNIA
Sbjct: 534 QAEVEWACERFI---------TPSAIALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIA 583
Query: 65 ETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
ETSLTI G+ YV+D G VK+ Y +TGM L V +SQ
Sbjct: 584 ETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQ 622
Score = 135 (52.6 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+ ATNIAETSLTI G+ YV+D G VK+ Y +TGM L V +SQ
Sbjct: 575 KVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQ 622
Score = 37 (18.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 125 NLTIVEQRQSLPIYKLKHELIKAVSD 150
NLT+ S I K + ELI+A+ D
Sbjct: 1449 NLTVRICGTSEKIAKAEQELIQALMD 1474
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 323 (118.8 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 65/144 (45%), Positives = 98/144 (68%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTA-RG---KI 183
+++ R SLP +K +H ++ A+S NQ++++ GETG GKTTQI Q++ E+ A RG I
Sbjct: 213 MLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSI 272
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVD 243
CTQPRR++AMSV++RVA E G +LG+ VGY +R E +T + + T G+LLR LVD
Sbjct: 273 ICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVD 332
Query: 244 LDLNNYSVIMLDEAHERTIHTDVL 267
+L + +++DE HER ++ D L
Sbjct: 333 RNLRGVTHVIVDEIHERGMNEDFL 356
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 27 PELI-ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQK 85
P+L+ +L + ++ + Q IFE G RK+V+ATNIAETS+TI+ + +V+D G K+
Sbjct: 527 PDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKET 586
Query: 86 VYNSKTGMDSLVVTPISQ 103
Y++ L+ + IS+
Sbjct: 587 SYDALNNTPCLLPSWISK 604
Score = 105 (42.0 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+EEP A + ++V+ATNIAETS+TI+ + +V+D G K+ Y++ L+ + IS+
Sbjct: 548 FEEP-ASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISK 604
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 294 (108.6 bits), Expect = 6.8e-36, Sum P(2) = 6.8e-36
Identities = 63/145 (43%), Positives = 94/145 (64%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR----GK 182
+I+++RQSLP ++ + ++K +S++Q+L++ G TG GKTTQI Q++ + +
Sbjct: 532 SILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVAN 591
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
I CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y T G+LLR
Sbjct: 592 IICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 651
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
D L + I++DE HERT +D L
Sbjct: 652 DTSLQGVTHIIVDEVHERTEESDFL 676
Score = 180 (68.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++ P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D G +K+K Y++
Sbjct: 878 VVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 937
Query: 90 KTGMDSLVVTPISQ 103
GM+SL T +SQ
Sbjct: 938 SKGMESLEDTFVSQ 951
Score = 137 (53.3 bits), Expect = 6.8e-36, Sum P(2) = 6.8e-36
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++++I+TNIAETS+TID + YV+D G +K+K Y++ GM+SL T +SQ
Sbjct: 902 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQ 951
Score = 37 (18.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 156 VIGETGSGKTTQITQYLAEAGFTARG 181
V+ E S K Q T+ L++ GF G
Sbjct: 1151 VLQEMASLKR-QFTELLSDIGFVKEG 1175
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 315 (115.9 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 65/140 (46%), Positives = 95/140 (67%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-TARG---KIGCTQ 187
R++LP YK K L+KA++ NQ+++V GETG GKTTQ+ QY+ E+ ARG I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
PRR++A+SV++RVA E G ++G+ VGY +R E +T + + T G+LLR LVD L
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 248 NYSVIMLDEAHERTIHTDVL 267
+ +++DE HER ++ D L
Sbjct: 416 GVTHVVVDEIHERGMNEDFL 435
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/100 (35%), Positives = 60/100 (60%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G ++I++ L E LG D ++++L + ++ S Q IF+ P G RK+V+ATN+
Sbjct: 587 GWDDINSLKNQL-EAHSLLG-DPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNM 644
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TI+ + YV+D G K+ Y++ L+ + IS+
Sbjct: 645 AETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISK 684
Score = 98 (39.6 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I ++V+ATN+AETS+TI+ + YV+D G K+ Y++ L+ + IS+
Sbjct: 635 IRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISK 684
Score = 38 (18.4 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 5 QEEIDTACEILYERMKSLGPDVP 27
Q E+D ++ K+L P++P
Sbjct: 215 QSEVDAHLHSFLDQKKTLIPEMP 237
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 321 (118.1 bits), Expect = 9.3e-36, Sum P(2) = 9.3e-36
Identities = 64/153 (41%), Positives = 100/153 (65%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
G+K +FG+ L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL
Sbjct: 144 GQKQAFGRLAKLQ--RERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 201
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
AGF+ + CTQPRR+A +S+AKRV E + G +VGY IRFE S+ T I ++T G
Sbjct: 202 AGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVG 258
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+LLR+ + L Y V+++DE HER +H D L
Sbjct: 259 LLLRQIQREPSLPQYEVLIVDEVHERHLHNDFL 291
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++SAL Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 409 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDP 468
Query: 90 KTGMDSLVVTPISQDLPEWKK 110
+ + L ISQ E +K
Sbjct: 469 QAKLQRLQEFWISQASAEQRK 489
Score = 106 (42.4 bits), Expect = 9.3e-36, Sum P(2) = 9.3e-36
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 433 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 482
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 291 (107.5 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 63/145 (43%), Positives = 92/145 (63%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR----GK 182
+++++RQSLP ++ + ++K +S +Q+L+V G TG GKTTQI Q++ +
Sbjct: 529 SVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVAN 588
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
I CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y T G+LLR
Sbjct: 589 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 648
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
D L + I++DE HERT +D L
Sbjct: 649 DTALQGVTHIIVDEVHERTEESDFL 673
Score = 181 (68.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D G +K+K Y++
Sbjct: 877 VIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 936
Query: 90 KTGMDSLVVTPISQ 103
GM+SL T +SQ
Sbjct: 937 SKGMESLEDTFVSQ 950
Score = 137 (53.3 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++++I+TNIAETS+TID + YV+D G +K+K Y++ GM+SL T +SQ
Sbjct: 901 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQ 950
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 156 VIGETGSGKTTQITQYLAEAGFTARG 181
V+ E S K Q T+ L++ GF G
Sbjct: 1150 VLQEMASLKR-QFTELLSDIGFVKEG 1174
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 294 (108.6 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 58/134 (43%), Positives = 87/134 (64%)
Query: 135 LPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAM 194
LPIY + +++K + QI+++IGETGSGK+TQ+ Q+LA++G A I CTQPR++AAM
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 195 SVAKRVAEEF-GCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
++ RV EE GC V T F + + YMTD LL+ + D L+ S ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 254 LDEAHERTIHTDVL 267
+DEAHER+++TD+L
Sbjct: 423 IDEAHERSLNTDLL 436
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 45/99 (45%), Positives = 58/99 (58%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 64
Q E++ ACE R + P I LP++ L E Q +F+ P G RKV+ ATNIA
Sbjct: 531 QAEVEWACE----RFVA-----PSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIA 580
Query: 65 ETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
ETSLTI G+ YV+D G VK+ Y +TGM L V +SQ
Sbjct: 581 ETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQ 619
Score = 136 (52.9 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+ ATNIAETSLTI G+ YV+D G VK+ Y +TGM L V +SQ
Sbjct: 572 KVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQ 619
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 315 (115.9 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 63/152 (41%), Positives = 99/152 (65%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
+K +FG+ L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL A
Sbjct: 147 QKQAFGRLAKLQ--RERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA 204
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
GF+ + CTQPRR+A +S+AKRV E + G +VGY IRFE S+ T I ++T G+
Sbjct: 205 GFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGL 261
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
LLR+ + L Y V+++DE HER +H D L
Sbjct: 262 LLRQIQREPSLPQYQVLIVDEVHERHLHNDFL 293
Score = 174 (66.3 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++SAL Q ++F+ AP G RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 411 VVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDP 470
Query: 90 KTGMDSLVVTPISQDLPEWKK 110
+ + L ISQ E +K
Sbjct: 471 QAKLQRLQEFWISQASAEQRK 491
Score = 106 (42.4 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 435 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 484
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 313 (115.2 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 63/152 (41%), Positives = 98/152 (64%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
+K +FG+ L +R +LPI + H +++ + ++Q+++V G+TG GK+TQ+ QYL A
Sbjct: 145 QKQAFGRLAKLQ--RERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAA 202
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
G + + CTQPRR+A +S+AKRV E + G +VGY IRFE S+ T I ++T G+
Sbjct: 203 GCS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGL 259
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
LLR+ + L Y V+++DE HER +H D L
Sbjct: 260 LLRQMQREPSLPQYQVLIVDEVHERHLHNDFL 291
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++SAL Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 409 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDP 468
Query: 90 KTGMDSLVVTPISQDLPEWKK 110
+ + L ISQ E +K
Sbjct: 469 QAKLQRLQEFWISQASAEQRK 489
Score = 106 (42.4 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 433 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 482
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 313 (115.2 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 63/153 (41%), Positives = 98/153 (64%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
G+K +F + L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL
Sbjct: 144 GQKQAFARLARLQ--RERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 201
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDG 234
AGF+ + CTQPRR+A +S+AKRV E + G +VGY IRFE S+ T I ++T G
Sbjct: 202 AGFS---HVACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVG 258
Query: 235 MLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+LLR + L Y V+++DE HER +H D L
Sbjct: 259 LLLRHVQREPTLPQYRVLIVDEVHERHLHNDFL 291
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++S L Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 409 VVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDP 468
Query: 90 KTGMDSLVVTPISQDLPEWKK 110
+ + L ISQ E +K
Sbjct: 469 QAKLQRLQEFWISQASAEQRK 489
Score = 106 (42.4 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 433 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 482
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 312 (114.9 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 62/152 (40%), Positives = 99/152 (65%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
+K SF K + L +++SLPI++ + ++++ V + +++V G+TG GK+TQ+ QYL +
Sbjct: 145 QKQSFSKLSKLR--REQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLAS 202
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
G I CTQPRR+A +S+AKRV+ E + G +VGY IRFE + T + ++T+G+
Sbjct: 203 GIN---NIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGL 259
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
LLR+ D L Y V+++DE HER +H D L
Sbjct: 260 LLRQIQQDASLGQYQVLIVDEVHERHLHCDFL 291
Score = 183 (69.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 43/109 (39%), Positives = 63/109 (57%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+ G EI T + E ++ I+LP++S L Q ++F+ APPG RK +I+T
Sbjct: 385 LSGVAEIST----IQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIIST 440
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKK 110
NIAETS+TIDG+ +VVD G VK+ ++ K M L IS+ E +K
Sbjct: 441 NIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRK 489
Score = 107 (42.7 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSL 339
+ + +I+TNIAETS+TIDG+ +VVD G VK+ ++ K M L
Sbjct: 433 VRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRL 475
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 313 (115.2 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 62/152 (40%), Positives = 100/152 (65%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
+K +FG+ L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL A
Sbjct: 144 QKQAFGRLAKLQ--HERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA 201
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
GF+ + CTQPRR+A +S+AKRV+ E + G +VGY IRFE ++ T I ++T G+
Sbjct: 202 GFS---HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGL 258
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
LLR+ + L Y V+++DE HER +H D L
Sbjct: 259 LLRQIQREPSLPQYQVLIVDEVHERHLHNDFL 290
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++SAL Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 408 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDP 467
Query: 90 KTGMDSLVVTPISQDLPEWKK 110
+ + L ISQ E +K
Sbjct: 468 QAKLHRLQEFWISQASAEQRK 488
Score = 104 (41.7 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 432 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQ 481
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 313 (115.2 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 62/152 (40%), Positives = 100/152 (65%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
+K +FG+ L +R +LPI + + +++ + ++Q+++V G+TG GK+TQ+ QYL A
Sbjct: 149 QKQAFGRLAKLQ--HERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA 206
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
GF+ + CTQPRR+A +S+AKRV+ E + G +VGY IRFE ++ T I ++T G+
Sbjct: 207 GFS---HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGL 263
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
LLR+ + L Y V+++DE HER +H D L
Sbjct: 264 LLRQIQREPSLPQYQVLIVDEVHERHLHNDFL 295
Score = 179 (68.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++LP++SAL Q ++F+ APPG RK +++TNIAETS+TIDGI +VVD G VK+ Y+
Sbjct: 413 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDP 472
Query: 90 KTGMDSLVVTPISQDLPEWKK 110
+ + L ISQ E +K
Sbjct: 473 QAKLHRLQEFWISQASAEQRK 493
Score = 104 (41.7 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ + +++TNIAETS+TIDGI +VVD G VK+ Y+ + + L ISQ
Sbjct: 437 VRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQ 486
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 240 (89.5 bits), Expect = 9.8e-18, P = 9.8e-18
Identities = 44/100 (44%), Positives = 70/100 (70%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQE ++ ++ E + P +P++ +LP+++ALP Q R+F APP +RK+++ATNI
Sbjct: 411 GQETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNI 470
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+T+ G+ YVVD G K K + ++ G+DSL+V PIS+
Sbjct: 471 AETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISK 510
Score = 224 (83.9 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 49/109 (44%), Positives = 71/109 (65%)
Query: 164 KTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQ-----EVGYTIRF 218
KTT + + ++ G I TQPRRVAA+S+A+RVAEE G LG +VGY++RF
Sbjct: 194 KTTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRF 253
Query: 219 EDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ S T +K++T+GMLL+E L D L YS I++DE HER ++ D++
Sbjct: 254 DTSVSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLV 302
Score = 138 (53.6 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 296 RISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
R ++++ATNIAETS+T+ G+ YVVD G K K + ++ G+DSL+V PIS+
Sbjct: 460 RTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISK 510
Score = 119 (46.9 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
G+ +S KK + + E R++LPI+ E+ + + N ++++IGETGSGK+TQI Q+L +
Sbjct: 128 GRTASLKKKAQM-LYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVD 186
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 314 (115.6 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 64/140 (45%), Positives = 94/140 (67%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTA-RG---KIGCTQ 187
R+ LP +K+K E + +VS NQ+L+V GETG GKTTQ+ Q++ E ++ RG I CTQ
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQ 284
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
PRR++A+SVA R++ E G +G+ VGY IR E S +T + + T G+LLR + D +L
Sbjct: 285 PRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLT 344
Query: 248 NYSVIMLDEAHERTIHTDVL 267
N S +++DE HER ++ D L
Sbjct: 345 NVSHLLVDEIHERGMNEDFL 364
Score = 170 (64.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 37/100 (37%), Positives = 61/100 (61%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G +EI E + M + D + ++LP++ ++P+ Q IF+ PP RK+V+ATNI
Sbjct: 512 GWDEISKLLEKI--NMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNI 569
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AE+S+TID + YVVD G K+ Y++ + L+ + IS+
Sbjct: 570 AESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISK 609
Score = 99 (39.9 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++V+ATNIAE+S+TID + YVVD G K+ Y++ + L+ + IS+
Sbjct: 562 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISK 609
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 311 (114.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 66/146 (45%), Positives = 101/146 (69%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIGCTQP 188
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F G +I CTQP
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQP 248
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDLN 247
RR+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L+
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTKL 273
+ +++DE HER +D L TKL
Sbjct: 309 TVTHVIVDEVHERDRFSDFLL--TKL 332
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 23/73 (31%), Positives = 48/73 (65%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
+ ++S + + Q ++ + P G RK++++TNIAETS+T++ + +V+D G VK+K +++
Sbjct: 658 VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL 717
Query: 91 TGMDSLVVTPISQ 103
+ L + IS+
Sbjct: 718 NFVTMLKMVWISK 730
Score = 97 (39.2 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +++++TNIAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 681 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 730
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 280 (103.6 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 61/145 (42%), Positives = 90/145 (62%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR----GK 182
+I+++RQSLP ++ + ++ + +Q++++ G TG GKTTQI Q++ +
Sbjct: 536 SILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVAN 595
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
I CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y T G+LLR
Sbjct: 596 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 655
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
D L S I++DE HERT +D L
Sbjct: 656 DTALQGVSHIIVDEVHERTEESDFL 680
Score = 182 (69.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D G +K+K Y++
Sbjct: 882 VIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 941
Query: 90 KTGMDSLVVTPISQ 103
GM+SL T +SQ
Sbjct: 942 SKGMESLEDTFVSQ 955
Score = 137 (53.3 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++++I+TNIAETS+TID + YV+D G +K+K Y++ GM+SL T +SQ
Sbjct: 906 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQ 955
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 156 VIGETGSGKTTQITQYLAEAGFTARG 181
V+ E S K Q T+ L++ GF G
Sbjct: 1155 VLQEMASLKR-QFTELLSDIGFAREG 1179
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 281 (104.0 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 61/144 (42%), Positives = 90/144 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR----GKI 183
I+++RQ LP ++ + ++K +S +Q++++ G TG GKTTQI Q++ + I
Sbjct: 488 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 547
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVD 243
CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y T G+LLR D
Sbjct: 548 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 607
Query: 244 LDLNNYSVIMLDEAHERTIHTDVL 267
L + I++DE HERT +D L
Sbjct: 608 ATLQGVTHIIVDEVHERTEESDFL 631
Score = 178 (67.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D G +K+K Y++
Sbjct: 834 VIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 893
Query: 90 KTGMDSLVVTPISQ 103
GM+SL T +SQ
Sbjct: 894 GKGMESLEDTFVSQ 907
Score = 135 (52.6 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++++I+TNIAETS+TID + YV+D G +K+K Y++ GM+SL T +SQ
Sbjct: 858 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQ 907
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 281 (104.0 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 61/144 (42%), Positives = 90/144 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR----GKI 183
I+++RQ LP ++ + ++K +S +Q++++ G TG GKTTQI Q++ + I
Sbjct: 538 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 597
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVD 243
CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y T G+LLR D
Sbjct: 598 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 657
Query: 244 LDLNNYSVIMLDEAHERTIHTDVL 267
L + I++DE HERT +D L
Sbjct: 658 ATLQGVTHIIVDEVHERTEESDFL 681
Score = 179 (68.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D G +K+K Y++
Sbjct: 884 VIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 943
Query: 90 KTGMDSLVVTPISQ 103
GM+SL T +SQ
Sbjct: 944 GKGMESLEDTFVSQ 957
Score = 135 (52.6 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++++I+TNIAETS+TID + YV+D G +K+K Y++ GM+SL T +SQ
Sbjct: 908 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQ 957
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 281 (104.0 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 61/144 (42%), Positives = 90/144 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR----GKI 183
I+++RQ LP ++ + ++K +S +Q++++ G TG GKTTQI Q++ + I
Sbjct: 541 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 600
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVD 243
CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y T G+LLR D
Sbjct: 601 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 660
Query: 244 LDLNNYSVIMLDEAHERTIHTDVL 267
L + I++DE HERT +D L
Sbjct: 661 ATLQGVTHIIVDEVHERTEESDFL 684
Score = 178 (67.7 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D G +K+K Y++
Sbjct: 887 VIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 946
Query: 90 KTGMDSLVVTPISQ 103
GM+SL T +SQ
Sbjct: 947 GKGMESLEDTFVSQ 960
Score = 135 (52.6 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++++I+TNIAETS+TID + YV+D G +K+K Y++ GM+SL T +SQ
Sbjct: 911 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQ 960
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 287 (106.1 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 66/156 (42%), Positives = 97/156 (62%)
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
KKSS + +++ +RQ LP ++ + ++ ++ +Q+L+V G TG GKTTQI Q++ +A
Sbjct: 521 KKSS---RRFQSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDA 577
Query: 176 GF----TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYM 231
A I CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y
Sbjct: 578 SLQGSPNAVANIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYC 637
Query: 232 TDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
T G+LLR DL L + +++DE HERT +D L
Sbjct: 638 TTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFL 673
Score = 174 (66.3 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 38/95 (40%), Positives = 61/95 (64%)
Query: 13 EILYERMKSLG----PDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSL 68
++LYE+++S ++ P++S+L SE Q +F P G K++I+TNIAETS+
Sbjct: 854 KMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSV 913
Query: 69 TIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
TID + YV+D G +K+K Y+ GM+SL T +S+
Sbjct: 914 TIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSR 948
Score = 127 (49.8 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +++I+TNIAETS+TID + YV+D G +K+K Y+ GM+SL T +S+
Sbjct: 899 VIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSR 948
Score = 40 (19.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 119 SFGKKTNLTIVEQRQSLPIYKLKHELIKAV 148
SF N T+++ + + K+ ELI+A+
Sbjct: 798 SFSSGVNKTVLKTMSVMDLDKVNLELIEAL 827
Score = 37 (18.1 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 156 VIGETGSGKTTQITQYLAEAGFTARG 181
V+ E S K Q T+ L++ GF G
Sbjct: 1148 VLQEIASLKR-QFTELLSDIGFVKEG 1172
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 375 (137.1 bits), Expect = 5.6e-34, P = 5.6e-34
Identities = 91/228 (39%), Positives = 136/228 (59%)
Query: 119 SFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
S TN + Q++ LPI K +++L+ AV NQI IV+G TG GKTTQI Q+L EAG+
Sbjct: 9 SLSTLTNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWA 68
Query: 179 AR-GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLL 237
++ G IGCTQPRR+ A SV++RV+ E G GY+I+F+ S +T IKYMTDG+LL
Sbjct: 69 SQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILL 128
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRI 297
E D L YS+++LDE HERT+ TD+L K K+N L + + N ++
Sbjct: 129 NEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDAN--KL 186
Query: 298 SRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPIS 345
S+ + +++I+G + V+ F+++ N +DS + T I+
Sbjct: 187 SQFFGQDKVC--TMSIEGKLFPVETLFLQKPTENY---VDSAIETVIN 229
Score = 197 (74.4 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+ G++EI+ + + + + D L+ LP+++ L + Q R+F RKV+ +T
Sbjct: 243 LSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFST 302
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
NIAETS+TIDGI YVVD GF KQ++YN T L+ PIS+
Sbjct: 303 NIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISK 344
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+ +TNIAETS+TIDGI YVVD GF KQ++YN T L+ PIS+
Sbjct: 297 KVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISK 344
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 311 (114.5 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 66/146 (45%), Positives = 101/146 (69%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIGCTQP 188
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F G +I CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQP 247
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDLN 247
RR+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L+
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTKL 273
+ +++DE HER +D L TKL
Sbjct: 308 TVTHVIVDEVHERDRFSDFLL--TKL 331
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 29/101 (28%), Positives = 58/101 (57%)
Query: 4 GQEEI-DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
G +EI IL++ K + + ++S + + Q ++ + P G RK++++TN
Sbjct: 630 GYDEIVGLRDRILFDD-KRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTN 688
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 689 IAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 729
Score = 97 (39.2 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +++++TNIAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 680 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 729
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 307 (113.1 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 63/143 (44%), Positives = 94/143 (65%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR---GKIG 184
++++R+ LPI+K K+ ++ + NQI+IV G+ GK++Q+ Q+ AE + G +
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVV 114
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQ + A+ +A RVA+E +G EVGY I FE+C SSET+++Y TD ML RE +
Sbjct: 115 CTQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSSP 174
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L NY VI+LD+ HER+I TDVL
Sbjct: 175 FLGNYGVIILDDIHERSIATDVL 197
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 40/124 (32%), Positives = 72/124 (58%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYS----AL--PSEMQTRIFEAAPPGSRKVV 58
+++I+ A EI+ + +L PD+ EL+++P+Y AL P++ +T + R+VV
Sbjct: 282 EQDIEKAYEIVCQEGSNLNPDLGELVVVPLYPKEKCALFKPND-ETE--KRCQVYQRRVV 338
Query: 59 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKS 118
+ + E+ + + + +V+D G ++KVYN + +SLV PISQ E +K ++G S
Sbjct: 339 LTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGS--S 396
Query: 119 SFGK 122
S GK
Sbjct: 397 SSGK 400
Score = 94 (38.1 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 267 LFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVK 326
L+ K + FK N E Y+ RVV+ + E+ + + + +V+D G +
Sbjct: 311 LYPKEKCALFKPNDETEKRCQVYQR-------RVVLTASSGESLIWSNTVRFVIDVGVER 363
Query: 327 QKVYNSKTGMDSLVVTPISQ 346
+KVYN + +SLV PISQ
Sbjct: 364 RKVYNPRIRANSLVTQPISQ 383
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 311 (114.5 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 66/146 (45%), Positives = 101/146 (69%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIGCTQP 188
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F G +I CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQP 247
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDLN 247
RR+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L+
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTKL 273
+ +++DE HER +D L TKL
Sbjct: 308 TVTHVIVDEVHERDRFSDFLL--TKL 331
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 29/101 (28%), Positives = 58/101 (57%)
Query: 4 GQEEI-DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
G +EI IL++ K + + ++S + + Q ++ + P G RK++++TN
Sbjct: 630 GYDEIVGLRDRILFDD-KRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTN 688
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 689 IAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 729
Score = 97 (39.2 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +++++TNIAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 680 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 729
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 311 (114.5 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 66/146 (45%), Positives = 101/146 (69%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIGCTQP 188
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F G +I CTQP
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQP 248
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDLN 247
RR+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L+
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTKL 273
+ +++DE HER +D L TKL
Sbjct: 309 TVTHVIVDEVHERDRFSDFLL--TKL 332
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 23/73 (31%), Positives = 48/73 (65%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
+ ++S + + Q ++ + P G RK++++TNIAETS+T++ + +V+D G VK+K +++
Sbjct: 658 VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL 717
Query: 91 TGMDSLVVTPISQ 103
+ L + IS+
Sbjct: 718 NFVTMLKMVWISK 730
Score = 97 (39.2 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +++++TNIAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 681 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 730
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 311 (114.5 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 66/146 (45%), Positives = 101/146 (69%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIGCTQP 188
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F G +I CTQP
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQP 263
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDLN 247
RR+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L+
Sbjct: 264 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 323
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTKL 273
+ +++DE HER +D L TKL
Sbjct: 324 TVTHVIVDEVHERDRFSDFLL--TKL 347
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 29/101 (28%), Positives = 58/101 (57%)
Query: 4 GQEEI-DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
G +EI IL++ K + + ++S + + Q ++ + P G RK++++TN
Sbjct: 646 GYDEIVGLRDRILFDD-KRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTN 704
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 705 IAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 745
Score = 97 (39.2 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +++++TNIAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 696 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 745
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 291 (107.5 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 68/162 (41%), Positives = 99/162 (61%)
Query: 125 NLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE--AGFTARGK 182
N I +R+SLPIYK + ++ + +Q+LI+ G TGSGK+TQ+ QY+ E A A +
Sbjct: 199 NRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVR 258
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
I +QPRR+AA+SV++R+++E G G VGY IR SS T++ T G LLR +
Sbjct: 259 IVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAM 318
Query: 243 DLD--LNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRL 282
D N + +++DEAHER + TD L TKL + +KN L
Sbjct: 319 DKKSFFKNTTHLIIDEAHERDLDTDFLLLATKL-ELQKNPHL 359
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 15 LYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIF 74
L R++S P IIL ++S + + Q ++F P K++++TNI +TS+TI +
Sbjct: 476 LLARLESSLPREQITIIL-LHSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLL 534
Query: 75 YVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
YV+D G K K Y+S L +T ISQ
Sbjct: 535 YVIDTGLAKMKTYDSTIDASQLTLTWISQ 563
Score = 110 (43.8 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+++++TNI +TS+TI + YV+D G K K Y+S L +T ISQ
Sbjct: 516 KIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQ 563
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 373 (136.4 bits), Expect = 4.5e-33, P = 4.5e-33
Identities = 92/231 (39%), Positives = 135/231 (58%)
Query: 100 PISQD-LPEWKKHVIGGKKSSFGKKTNLT--IVEQRQSLPIYKLKHELIKAVSDNQILIV 156
PI Q+ LP + + + +F + I R +LP+ + +++A+ +N I++V
Sbjct: 319 PIEQEPLPPELEPTVDTDRKAFHVAVTRSPEIQSARLALPVVSEEQRIMEAIHNNNIVVV 378
Query: 157 IGETGSGKTTQITQYLAEAGFTAR-----GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
G TGSGKTTQI Q+L EAG+ + G IG TQPRRVAA+S++KRVAEE G Q+
Sbjct: 379 CGATGSGKTTQIPQFLFEAGYGSPDSPTPGMIGITQPRRVAAVSMSKRVAEELGDH-SQK 437
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPT 271
VGY IRFE + +T +K+MTDG+LLRE DL L YS I++DEAHER+++TD+L
Sbjct: 438 VGYQIRFEGTVNKDTAVKFMTDGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIG-- 495
Query: 272 KLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDP 322
LS+ K R E E+P + V+++ + LT + + P
Sbjct: 496 MLSRIIK-LRAEMAQ---EDPTVKPLKLVIMSATLRIEDLTENKNLFATPP 542
Score = 194 (73.4 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 46/101 (45%), Positives = 62/101 (61%)
Query: 3 KGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
+G E + +I E GP + +LP+YS LP++ Q R+FE P GSR VV+ATN
Sbjct: 652 EGDENEEEEFKI-EEEEAGTGPS--RMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATN 708
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
+AETSLTI GI YV D G K++ Y+ TG+ S V IS+
Sbjct: 709 VAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISK 749
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 305 (112.4 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 63/145 (43%), Positives = 97/145 (66%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-TARG---K 182
T++E R++LP +K K L++A++ NQ+++V GETG GKTTQ+ QY+ E+ + RG
Sbjct: 252 TMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCN 311
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
I CTQPRR++AM+V++RV+ E G LG+ VG+ +R E T + + T G+LLR L
Sbjct: 312 IICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLS 371
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
D +LN + + +DE HER ++ D L
Sbjct: 372 DRNLNGVTHVFVDEIHERGMNEDFL 396
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 22 LGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGF 81
LG D +++L + ++ + Q IFE APP RK+V+ATN+AE S+TI+ + +VVD G
Sbjct: 565 LG-DPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGK 623
Query: 82 VKQKVYNSKTGMDSLVVTPISQ 103
K+ Y++ L+ + ISQ
Sbjct: 624 AKETTYDALNNTPCLLPSWISQ 645
Score = 96 (38.9 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I ++V+ATN+AE S+TI+ + +VVD G K+ Y++ L+ + ISQ
Sbjct: 596 IRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQ 645
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 306 (112.8 bits), Expect = 8.4e-33, Sum P(2) = 8.4e-33
Identities = 68/154 (44%), Positives = 100/154 (64%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA----EAGFTARGKIGCTQ 187
RQSLP+++ K E++K + +N++++++GETGSGKTTQI Q+L E G R I CTQ
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCR--IFCTQ 157
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDL 246
PRR+A ++VA+RVA E ++GQ VGY IR E S TL+ + T+G+LLR + D L
Sbjct: 158 PRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSAL 217
Query: 247 NNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQ 280
+ + +++DE HER +D L KL +NQ
Sbjct: 218 STVTHVIVDEVHERDRFSDFLL--IKLRDILQNQ 249
Score = 95 (38.5 bits), Expect = 8.4e-33, Sum P(2) = 8.4e-33
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
I +++++TNIAETS+T++ + +V+D G +K+K +++ + + L IS+
Sbjct: 592 IRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISK 641
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 294 (108.6 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 59/143 (41%), Positives = 95/143 (66%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTA---RGKIG 184
++++R+ LPI+K K+ ++ + +QI+IV G+ GK++Q+ Q+ AE + G +
Sbjct: 55 LLKEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVV 114
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQ + A+ +A RVA+E +G EVGY I FE+C +SET+++Y TD ML RE + +
Sbjct: 115 CTQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNP 174
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L +Y VI+LD+ HER++ TDVL
Sbjct: 175 FLGSYGVIILDDIHERSMATDVL 197
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 38/120 (31%), Positives = 69/120 (57%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYS----AL--PSEMQTRIFEAAPPGSRKVV 58
+++I+ A EI+ + +L PD+ EL+++P+Y AL P++ +T + P R+VV
Sbjct: 282 EQDIEKAYEIVCQEGSNLNPDLGELVVVPLYPKEKCALFKPND-ETE--KRCPVYQRRVV 338
Query: 59 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKS 118
+ + E+ + + + +V+D G ++KVYN + DSLV PISQ E +K ++ S
Sbjct: 339 LTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPS 398
Score = 98 (39.6 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 267 LFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVK 326
L+ K + FK N E Y+ RVV+ + E+ + + + +V+D G +
Sbjct: 311 LYPKEKCALFKPNDETEKRCPVYQR-------RVVLTASSGESLICSNTVKFVIDVGVER 363
Query: 327 QKVYNSKTGMDSLVVTPISQ 346
+KVYN + DSLV PISQ
Sbjct: 364 RKVYNPRIRADSLVTQPISQ 383
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 278 (102.9 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 102 SQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETG 161
++ + E K + K + +++ EQRQ LP ++ + +++ + NQ+L++ G TG
Sbjct: 549 TEQMQEENKKLCREFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTG 608
Query: 162 SGKTTQITQYLAEAGFTARGK------IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYT 215
GKTTQI Q++ + F G+ I CTQPRR++A++VA RVA+E LG GY
Sbjct: 609 CGKTTQIPQFILD-NFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQ 667
Query: 216 IRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
IR E SS T + + T G+LLR D +L+ + +++DE HERT +D L
Sbjct: 668 IRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFL 719
Score = 157 (60.3 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 30 IILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 89
++ P++S+L +E Q +F G K++I+TNIAETS+TID + YV+D G +K+K Y++
Sbjct: 925 VVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDA 984
Query: 90 KTGMDSL 96
M+SL
Sbjct: 985 SRSMESL 991
Score = 122 (48.0 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 21/43 (48%), Positives = 35/43 (81%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSL 339
+++++I+TNIAETS+TID + YV+D G +K+K Y++ M+SL
Sbjct: 949 VTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESL 991
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 299 (110.3 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 57/143 (39%), Positives = 97/143 (67%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR---GKIG 184
++++R+ LPI+K K+ ++++ NQ+++V G++ GK++Q+ Q+ AE + G +
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 114
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQ + A+ +A RVA+E +G EVGY I FE+C ++ET+++Y TD ML RE + +
Sbjct: 115 CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNP 174
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L +Y VI+LD+ HER++ TDVL
Sbjct: 175 FLGSYGVIILDDVHERSLATDVL 197
Score = 146 (56.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 32/117 (27%), Positives = 64/117 (54%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIAT 61
+++I+ E++ + +L PDV +L+++P+Y + + E R+VV+ T
Sbjct: 282 EQDIEKTYELVCQEGSNLNPDVGDLVVIPLYPKEKCSLFRPVDETEKRCQVYQRRVVLTT 341
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKS 118
+ E+ + + +V+D G +++VYN + +SLV+ PISQ E +K ++G S
Sbjct: 342 SCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPS 398
Score = 88 (36.0 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
RVV+ T+ E+ + + +V+D G +++VYN + +SLV+ PISQ
Sbjct: 336 RVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQ 383
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 291 (107.5 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 60/148 (40%), Positives = 93/148 (62%)
Query: 129 VEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG----KIG 184
+++RQ LP++K +H +++ + +++++V GETGSGK+TQ+ +L E G I
Sbjct: 568 LKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIV 627
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLLRE 239
CTQPRR++A+S+A RV EE GC G GY IR E T T + Y T G+LLR+
Sbjct: 628 CTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRK 687
Query: 240 CLVDLDLNNYSVIMLDEAHERTIHTDVL 267
D L++ S +++DE HER++H+D L
Sbjct: 688 LQEDGLLSSISHVIVDEVHERSVHSDFL 715
Score = 138 (53.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 902 LIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHES 961
Query: 91 TGMDSLVVTPISQ 103
+ M SL T +S+
Sbjct: 962 SQMSSLEETFVSK 974
Score = 104 (41.7 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SL T +S+
Sbjct: 925 VRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSK 974
Score = 49 (22.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 133 QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
QSL ++++ L+KAV + +G+ K+ IT+ LA TA+GK
Sbjct: 1208 QSLSLHEIA--LLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGK 1255
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 280 (103.6 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 67/173 (38%), Positives = 102/173 (58%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KK +L +E R+ LP Y ++ EL+ + ++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 105 KKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYI 163
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 164 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILY 223
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T G++L+ D L++ S I+LDE HER + +DVL K L F+ + ++
Sbjct: 224 CTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 276
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 36/100 (36%), Positives = 66/100 (66%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G + I T ++L ++ D + +I+P++S +P+ QT++F+ PPG RK+VIATNI
Sbjct: 411 GWDNISTLHDLLMSQVM-FKSD--KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNI 467
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 468 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 507
Score = 108 (43.1 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 458 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 507
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 355 (130.0 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 136 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 195
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 196 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Score = 184 (69.8 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 188 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Score = 88 (36.0 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFR 62
Score = 45 (20.9 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + + + + F+ AP PG R
Sbjct: 37 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRR 95
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 355 (130.0 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ ACE+L +R + LG + EL++LP+Y+ LPS+MQ RIF+ PPG+RKVV+ATNI
Sbjct: 136 GQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNI 195
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 196 AETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Score = 184 (69.8 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV+ATNIAETSLTI+GI YV+DPGF KQK YN +TGM+SL VTP S+
Sbjct: 188 KVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Score = 88 (36.0 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 251 VIMLDEAHERTIHTDVLFDPTK-LSKFK 277
V+M+DEAHERT+HTD+LF K +++F+
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFR 62
Score = 43 (20.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 1 MVKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP----PGSR 55
MV E +IL+ +K + PEL +L + + + + F+ AP PG R
Sbjct: 37 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 95
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 283 (104.7 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 66/162 (40%), Positives = 97/162 (59%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KKT+L +E R+ LP Y ++ EL+ + ++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 193 KKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYI 251
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 252 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 311
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
T G++L+ D L++ S I+LDE HER + +DVL K
Sbjct: 312 CTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVK 353
Score = 184 (69.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 37/100 (37%), Positives = 66/100 (66%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G + I T ++L ++ D + II+P++S +P+ QT++F+ PPG RK+VIATNI
Sbjct: 499 GWDNISTLHDLLMSQVM-FKSD--KFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNI 555
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 556 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 595
Score = 108 (43.1 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 546 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 595
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 268 (99.4 bits), Expect = 4.3e-32, Sum P(3) = 4.3e-32
Identities = 61/149 (40%), Positives = 94/149 (63%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE----AGFTARGKIGCT 186
QRQ LP + L+ E+++ V+++Q+ I+ GETGSGK+TQ Q++ + G I T
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVT 688
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV---- 242
QPRR++A+ +A RV++E ++GQEVGY IR E T +T I ++T G+LLR V
Sbjct: 689 QPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGR 748
Query: 243 --DL--DLNNYSVIMLDEAHERTIHTDVL 267
D+ L + S +++DE HER++ TD L
Sbjct: 749 VEDVVASLADVSHVVIDEVHERSLDTDFL 777
Score = 166 (63.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 41/96 (42%), Positives = 59/96 (61%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G EI+ AC +L +SL L +LP++++L ++ Q ++F P G RKVV+ATN+
Sbjct: 896 GVAEINRACGML----RSLNC----LHVLPLHASLETKEQRKVFVPPPSGKRKVVVATNV 947
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVT 99
AETS+TID I VVD G VK+ Y++ M L T
Sbjct: 948 AETSITIDDIIVVVDTGKVKETSYDAANNMRRLEET 983
Score = 107 (42.7 bits), Expect = 4.3e-32, Sum P(3) = 4.3e-32
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVT 342
+VV+ATN+AETS+TID I VVD G VK+ Y++ M L T
Sbjct: 940 KVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEET 983
Score = 44 (20.5 bits), Expect = 4.3e-32, Sum P(3) = 4.3e-32
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 6 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRI-FEAAP--PGSRKVVIATN 62
EE+++ + E PDV ++ IL V + ++T + F +P P + I N
Sbjct: 461 EEMESLESVFGELFTRPSPDVCQIRILDVENGPNKNVETHLQFRKSPNYPNQLILSIVAN 520
Query: 63 I-AETSL-TI-DGIFYV 76
+ A L TI G+ Y+
Sbjct: 521 LPAYIKLSTIKQGLAYM 537
Score = 37 (18.1 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEV 212
GF AR P AA+ A + GC G+E+
Sbjct: 1047 GFLARAPT----PPEAAAVEGAITMLRRMGCLDGEEL 1079
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 292 (107.8 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 59/143 (41%), Positives = 93/143 (65%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR---GKIG 184
++++R+ LPI+K K+ ++ + NQI+IV G+ GK+ Q+ Q+ AE + G +
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVI 114
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQ + + +A RVA+E +G EVGY I FE+C ++ET+++Y TD ML RE + +
Sbjct: 115 CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNP 174
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L +Y VI+LD+ HER+I TDVL
Sbjct: 175 FLGSYGVIILDDIHERSIATDVL 197
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 38/121 (31%), Positives = 68/121 (56%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIAT 61
+++I+ CE +Y+ +L PD+ EL+++P+Y + + E R+VV+ T
Sbjct: 282 EQDIEKVCETVYQG-SNLNPDLGELVVVPLYPKEKCSLFKPLDETEKRCQVYQRRVVLTT 340
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
+ E + + + +V+D G ++KVYN + +SLV+ PISQ E +K ++G SS G
Sbjct: 341 SSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGS--SSSG 398
Query: 122 K 122
K
Sbjct: 399 K 399
Score = 93 (37.8 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 267 LFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVK 326
L+ K S FK E Y+ RVV+ T+ E + + + +V+D G +
Sbjct: 310 LYPKEKCSLFKPLDETEKRCQVYQR-------RVVLTTSSGEFLIWSNSVRFVIDVGVER 362
Query: 327 QKVYNSKTGMDSLVVTPISQ 346
+KVYN + +SLV+ PISQ
Sbjct: 363 RKVYNPRIRANSLVMQPISQ 382
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 297 (109.6 bits), Expect = 5.8e-32, Sum P(2) = 5.8e-32
Identities = 57/143 (39%), Positives = 97/143 (67%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR---GKIG 184
++++R+ LPI+K K+ ++++ NQ+++V G++ GK++Q+ Q+ AE + G +
Sbjct: 62 LLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 121
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQ + A+ +A RVA+E +G EVGY I FE+C ++ET+++Y TD ML RE + +
Sbjct: 122 CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNP 181
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L +Y VI+LD+ HER++ TDVL
Sbjct: 182 FLGSYGVIILDDVHERSLATDVL 204
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 34/117 (29%), Positives = 64/117 (54%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIAT 61
+++I+ EI+ + +L PDV EL+++P+Y + + E R+VV+ T
Sbjct: 289 EQDIEKTYEIVCQEGSNLNPDVGELVVIPLYPKEKCSLFRPVDETEKRCQASQRRVVLTT 348
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKS 118
+ E+ + + +V+D G +++VYN + +SLV+ PISQ E +K ++G S
Sbjct: 349 SCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPS 405
Score = 88 (36.0 bits), Expect = 5.8e-32, Sum P(2) = 5.8e-32
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
RVV+ T+ E+ + + +V+D G +++VYN + +SLV+ PISQ
Sbjct: 343 RVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQ 390
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 286 (105.7 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 62/155 (40%), Positives = 99/155 (63%)
Query: 123 KTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
K + ++++R+SLP++K K E +K + +NQ++++ ETG GK+TQI QY+ E+ F ++ K
Sbjct: 613 KVDKGVIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILES-FISQEK 671
Query: 183 -----IGCTQPRRVAAMSVAKRVAEEFGC-----RLGQEVGYTIRFEDCTSSETLIKYMT 232
I CTQPRR++A+ VA+RV+ E+ C +G VGY IR E S T + + T
Sbjct: 672 GSECNIVCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCT 731
Query: 233 DGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
G+LLR L ++++ S I++DE HER+ D L
Sbjct: 732 TGILLRRILDVSNISDLSHIIIDEVHERSTDNDFL 766
Score = 158 (60.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 39/92 (42%), Positives = 56/92 (60%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELI-ILPVYSALPSEMQTRIFEAAPPGSRKVVIA 60
V G +I C L + + + + + I +P++S+L + Q ++FE AP G KVVIA
Sbjct: 904 VPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRVKVVIA 963
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 92
TNIAETS+TI+ + VVD G V Q +NS TG
Sbjct: 964 TNIAETSITIEDVEIVVDCGRVNQMTFNSITG 995
Score = 108 (43.1 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 335
PN R+ +VVIATNIAETS+TI+ + VVD G V Q +NS TG
Sbjct: 954 PNG-RV-KVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITG 995
Score = 40 (19.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 108 WKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSD 150
W+K + G + F ++ L+I R I LK + ++ +S+
Sbjct: 1184 WRKSIQDGNEYQFCRENYLSIPTLRT---IQDLKLQFVEILSE 1223
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 280 (103.6 bits), Expect = 8.4e-32, Sum P(2) = 8.4e-32
Identities = 67/173 (38%), Positives = 103/173 (59%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KK++L +E R+ LP Y ++ EL+ + ++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 185 KKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYI 243
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 244 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 303
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T G++L+ D L++ S I+LDE HER + +DVL K L F+ + ++
Sbjct: 304 CTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKV 356
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 25/59 (42%), Positives = 43/59 (72%)
Query: 45 RIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
++F+ PPG RK+VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 573
Score = 108 (43.1 bits), Expect = 8.4e-32, Sum P(2) = 8.4e-32
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 524 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 573
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 280 (103.6 bits), Expect = 8.6e-32, Sum P(2) = 8.6e-32
Identities = 67/173 (38%), Positives = 102/173 (58%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KK +L +E R+ LP Y ++ EL+ + ++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 191 KKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYI 249
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILY 309
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T G++L+ D L++ S I+LDE HER + +DVL K L F+ + ++
Sbjct: 310 CTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 362
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 26/64 (40%), Positives = 45/64 (70%)
Query: 40 SEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVT 99
S +++F+ PPG RK+VIATNIAETS+TID + YV+D G +K+ ++++ + ++
Sbjct: 516 SGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAE 575
Query: 100 PISQ 103
+S+
Sbjct: 576 WVSK 579
Score = 108 (43.1 bits), Expect = 8.6e-32, Sum P(2) = 8.6e-32
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 530 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 579
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 280 (103.6 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 67/173 (38%), Positives = 102/173 (58%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KK +L +E R+ LP Y ++ EL+ + ++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 191 KKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYI 249
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILY 309
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T G++L+ D L++ S I+LDE HER + +DVL K L F+ + ++
Sbjct: 310 CTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 362
Score = 182 (69.1 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 36/100 (36%), Positives = 66/100 (66%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G + I T ++L ++ D + +I+P++S +P+ QT++F+ PPG RK+VIATNI
Sbjct: 497 GWDNISTLHDLLMSQVM-FKSD--KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNI 553
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 554 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 593
Score = 108 (43.1 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 544 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 593
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 347 (127.2 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 80/195 (41%), Positives = 121/195 (62%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRV 191
R LPI + ++++ +++N I+IV GETGSGKTTQ+ Q+L EAG+ IG T+PRRV
Sbjct: 257 RLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTEPRRV 316
Query: 192 AAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSV 251
AA++++KRVA E EV Y IRFE + T IK+MTDG+LL+E D L+ YSV
Sbjct: 317 AAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLSKYSV 375
Query: 252 IMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSL 311
I+LDEAHER+++TD+L LS R+ PL +K +P + ++++ + +
Sbjct: 376 IILDEAHERSVYTDILVG--LLS------RIVPLRHKRGQP----LKLIIMSATLRVSDF 423
Query: 312 TIDGIFYVVDPGFVK 326
T + + + P +K
Sbjct: 424 TENTRLFKIPPPLLK 438
Score = 181 (68.8 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 46/102 (45%), Positives = 61/102 (59%)
Query: 3 KGQEEIDTACEILYERMKSLGPDVPE-LIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+G EE D E+ E +G + L +LP+YS L SE Q RIF P G R V++T
Sbjct: 591 EGLEE-DNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVST 649
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
N+AETSLTI I YVVD G K ++Y+ TG+ + VVT S+
Sbjct: 650 NVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSK 691
Score = 41 (19.5 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 88 NSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKA 147
N +T +D+ V I D+ V GG + + + L + ++++ I K + +K
Sbjct: 13 NPQTIVDNSAVKKIQIDVDA----VAGGNQVGYDEANALVLPSEKRATKIKVDKVQHVKI 68
Query: 148 VSDNQ 152
+S Q
Sbjct: 69 LSKKQ 73
Score = 38 (18.4 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 197 AKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
A R++ RL Y FED + + K + D ML C+
Sbjct: 701 AGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCM 745
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 280 (103.6 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 67/173 (38%), Positives = 103/173 (59%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KK++L +E R+ LP Y ++ EL+ + ++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 305 KKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYI 363
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 364 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 423
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T G++L+ D L++ S I+LDE HER + +DVL K L F+ + ++
Sbjct: 424 CTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKV 476
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 36/100 (36%), Positives = 65/100 (65%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G + I T ++L ++ D +I+P++S +P+ QT++F+ PPG RK+VIATNI
Sbjct: 611 GWDNISTLHDLLMSQVM-FKSD--RFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNI 667
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 668 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 707
Score = 108 (43.1 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 658 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 707
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 211 (79.3 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 48/94 (51%), Positives = 65/94 (69%)
Query: 188 PRRVAAMSVAKRVAEEFGCR-LGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
PRRVA ++VA+RV++E +G VGYTIRF++ S +T IK++TDG+L+RE + D L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 247 NNYSVIMLDEAHERTIHTDVLFDPTK--LSKFKK 278
Y ++LDE HER+I TDVL TK L K KK
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKK 170
Score = 190 (71.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 13 EILYERMKS-LGPD-VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTI 70
EI + K+ + PD + + IL +YS+LP++ Q IFE PP +RKV+++TNIAETS+TI
Sbjct: 382 EICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTI 441
Query: 71 DGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQD 104
I YV+D G VK K ++ G + L VT IS+D
Sbjct: 442 PNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKD 475
Score = 127 (49.8 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 35/88 (39%), Positives = 50/88 (56%)
Query: 264 TDVLFDPTKLSKFKKNQRLEPLYNKYE----EPNAWRISRVVIATNIAETSLTIDGIFYV 319
T+++ P K+ K Q L NK + EP +V+++TNIAETS+TI I YV
Sbjct: 390 TEIM--PDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYV 447
Query: 320 VDPGFVKQKVYNSKTGMDSLVVTPISQD 347
+D G VK K ++ G + L VT IS+D
Sbjct: 448 IDSGKVKIKYFDVNRGSNVLRVTQISKD 475
Score = 119 (46.9 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 133 QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
+ LPI K KHE+ K + N ++I+ GETG GKTTQ+ Q + E F + K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 37 (18.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 4 GQEEIDTACEILYERMK 20
GQEEI+ +L E++K
Sbjct: 325 GQEEIEMVNIMLKEKLK 341
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 211 (79.3 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 48/94 (51%), Positives = 65/94 (69%)
Query: 188 PRRVAAMSVAKRVAEEFGCR-LGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
PRRVA ++VA+RV++E +G VGYTIRF++ S +T IK++TDG+L+RE + D L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 247 NNYSVIMLDEAHERTIHTDVLFDPTK--LSKFKK 278
Y ++LDE HER+I TDVL TK L K KK
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKK 170
Score = 190 (71.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 13 EILYERMKS-LGPD-VPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTI 70
EI + K+ + PD + + IL +YS+LP++ Q IFE PP +RKV+++TNIAETS+TI
Sbjct: 382 EICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTI 441
Query: 71 DGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQD 104
I YV+D G VK K ++ G + L VT IS+D
Sbjct: 442 PNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKD 475
Score = 127 (49.8 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 35/88 (39%), Positives = 50/88 (56%)
Query: 264 TDVLFDPTKLSKFKKNQRLEPLYNKYE----EPNAWRISRVVIATNIAETSLTIDGIFYV 319
T+++ P K+ K Q L NK + EP +V+++TNIAETS+TI I YV
Sbjct: 390 TEIM--PDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYV 447
Query: 320 VDPGFVKQKVYNSKTGMDSLVVTPISQD 347
+D G VK K ++ G + L VT IS+D
Sbjct: 448 IDSGKVKIKYFDVNRGSNVLRVTQISKD 475
Score = 119 (46.9 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 133 QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
+ LPI K KHE+ K + N ++I+ GETG GKTTQ+ Q + E F + K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 37 (18.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 4 GQEEIDTACEILYERMK 20
GQEEI+ +L E++K
Sbjct: 325 GQEEIEMVNIMLKEKLK 341
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 277 (102.6 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 67/173 (38%), Positives = 103/173 (59%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KKT+ +E R+ LP Y ++ EL+ ++++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 184 KKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYI 242
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 243 ERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILY 302
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T G++L+ D L++ S I+LDE HER + +DVL K L F+ + ++
Sbjct: 303 CTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKV 355
Score = 182 (69.1 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 36/100 (36%), Positives = 66/100 (66%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G + I T ++L ++ D + +I+P++S +P+ QT++F+ PPG RK+VIATNI
Sbjct: 490 GWDNISTLHDLLMSQVM-FKSD--KFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNI 546
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 547 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 586
Score = 108 (43.1 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 537 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 586
>GENEDB_PFALCIPARUM|MAL13P1.14 [details] [associations]
symbol:MAL13P1.14 "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 290 (107.1 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 64/139 (46%), Positives = 93/139 (66%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQPRR 190
R SLP+ + ELI+AV + ++ V G+TG GK+TQ+ Q+L E GFT+ IG TQPR+
Sbjct: 455 RASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFIGITQPRK 514
Query: 191 VAAMSVAKRVAEEFGCRLGQEV-GYTIRFEDCTS-SETLIKYMTDGMLLRECLVDLDLNN 248
+A S+ R+ +E L +E+ GY IRFE + IK MT+G+LL+E + D L+
Sbjct: 515 IAVKSICNRLNDE----LNEEICGYQIRFEKSYFLKHSKIKVMTEGILLKEIMSDFILSK 570
Query: 249 YSVIMLDEAHERTIHTDVL 267
YSVI+LDEAHER+I+ D++
Sbjct: 571 YSVIILDEAHERSINMDII 589
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
L + +YS LP + Q +F R +++TNIAETSLT+ I YV+D G K+K+Y+
Sbjct: 882 LKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYS 941
Query: 89 SKTGMDSLVVTPISQ 103
+ ++ IS+
Sbjct: 942 NLNDYSYYIIDNISK 956
Score = 100 (40.3 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 274 SKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 333
SK ++E +N E R+ +++TNIAETSLT+ I YV+D G K+K+Y++
Sbjct: 889 SKLPMKDQMELFHNPKENE---RVC--ILSTNIAETSLTLPNIRYVIDCGKEKRKIYSNL 943
Query: 334 TGMDSLVVTPISQ 346
++ IS+
Sbjct: 944 NDYSYYIIDNISK 956
>UNIPROTKB|Q8IET8 [details] [associations]
symbol:MAL13P1.14 "ATP dependent DEAD-box helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 290 (107.1 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 64/139 (46%), Positives = 93/139 (66%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQPRR 190
R SLP+ + ELI+AV + ++ V G+TG GK+TQ+ Q+L E GFT+ IG TQPR+
Sbjct: 455 RASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFIGITQPRK 514
Query: 191 VAAMSVAKRVAEEFGCRLGQEV-GYTIRFEDCTS-SETLIKYMTDGMLLRECLVDLDLNN 248
+A S+ R+ +E L +E+ GY IRFE + IK MT+G+LL+E + D L+
Sbjct: 515 IAVKSICNRLNDE----LNEEICGYQIRFEKSYFLKHSKIKVMTEGILLKEIMSDFILSK 570
Query: 249 YSVIMLDEAHERTIHTDVL 267
YSVI+LDEAHER+I+ D++
Sbjct: 571 YSVIILDEAHERSINMDII 589
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
L + +YS LP + Q +F R +++TNIAETSLT+ I YV+D G K+K+Y+
Sbjct: 882 LKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYS 941
Query: 89 SKTGMDSLVVTPISQ 103
+ ++ IS+
Sbjct: 942 NLNDYSYYIIDNISK 956
Score = 100 (40.3 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 274 SKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 333
SK ++E +N E R+ +++TNIAETSLT+ I YV+D G K+K+Y++
Sbjct: 889 SKLPMKDQMELFHNPKENE---RVC--ILSTNIAETSLTLPNIRYVIDCGKEKRKIYSNL 943
Query: 334 TGMDSLVVTPISQ 346
++ IS+
Sbjct: 944 NDYSYYIIDNISK 956
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 277 (102.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 58/150 (38%), Positives = 94/150 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-----TARGK 182
++++RQ LP++K ++ +++ + +++++V GETGSGK+TQ+ +L E T++
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV +E GC G GY IR E S T + Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L N S +++DE HER++ +D L
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFL 711
Score = 154 (59.3 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 897 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 956
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 957 SQMSSLVETFVSK 969
Score = 111 (44.1 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 920 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 969
Score = 51 (23.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 31/104 (29%), Positives = 47/104 (45%)
Query: 116 KKSSFGKKTNLTIVEQR---QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYL 172
K + F T E+ Q+LP ++ L+KAV + +G+ K+ +T+ L
Sbjct: 1183 KAAGFSSSTTSNDWEENRASQTLPFQEIA--LLKAVLAAGLYDNVGKIIYTKSVDVTEKL 1240
Query: 173 AEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE-VGYT 215
A TA+GK +V SV R + +G L QE V YT
Sbjct: 1241 ACIVETAQGKA------QVHPSSV-NRDLQTYGWLLYQEKVRYT 1277
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 277 (102.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 58/150 (38%), Positives = 94/150 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-----TARGK 182
++++RQ LP++K ++ +++ + +++++V GETGSGK+TQ+ +L E T++
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV +E GC G GY IR E S T + Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L N S +++DE HER++ +D L
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFL 711
Score = 146 (56.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 960 SQMSSLVETFVSK 972
Score = 111 (44.1 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Score = 41 (19.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 123 KTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
KT + Q+L ++ L+KAV + +G+ K+ +T+ LA TA+GK
Sbjct: 1193 KTYYSSSRASQTLSFQEIA--LLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGK 1250
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 277 (102.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 58/150 (38%), Positives = 94/150 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-----TARGK 182
++++RQ LP++K ++ +++ + +++++V GETGSGK+TQ+ +L E T++
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV +E GC G GY IR E S T + Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L N S +++DE HER++ +D L
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFL 711
Score = 154 (59.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 960 SQMSSLVETFVSK 972
Score = 111 (44.1 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Score = 51 (23.0 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 31/104 (29%), Positives = 47/104 (45%)
Query: 116 KKSSFGKKTNLTIVEQR---QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYL 172
K + F T E+ Q+LP ++ L+KAV + +G+ K+ +T+ L
Sbjct: 1186 KAAGFSSSTTSNDWEENRASQTLPFQEIA--LLKAVLAAGLYDNVGKIIYTKSVDVTEKL 1243
Query: 173 AEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE-VGYT 215
A TA+GK +V SV R + +G L QE V YT
Sbjct: 1244 ACIVETAQGKA------QVHPSSV-NRDLQTYGWLLYQEKVRYT 1280
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 277 (102.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 58/150 (38%), Positives = 94/150 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-----TARGK 182
++++RQ LP++K ++ +++ + +++++V GETGSGK+TQ+ +L E T++
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV +E GC G GY IR E S T + Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L N S +++DE HER++ +D L
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFL 711
Score = 146 (56.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 960 SQMSSLVETFVSK 972
Score = 111 (44.1 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Score = 41 (19.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
T R S + + L+KAV + +G+ K+ +T+ LA TA+GK
Sbjct: 1198 TFYSSRASQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGK 1253
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 277 (102.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 58/150 (38%), Positives = 94/150 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-----TARGK 182
++++RQ LP++K ++ +++ + +++++V GETGSGK+TQ+ +L E T++
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV +E GC G GY IR E S T + Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L N S +++DE HER++ +D L
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFL 711
Score = 146 (56.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 960 SQMSSLVETFVSK 972
Score = 111 (44.1 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Score = 40 (19.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 144 LIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
L+KAV + +G+ K+ +T+ LA TA+GK
Sbjct: 1215 LLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGK 1253
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 276 (102.2 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 66/172 (38%), Positives = 102/172 (59%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA----E 174
KKT+ +E R+ LP Y ++ EL+ ++++Q+ ++ GETG GKTTQ+TQ++ E
Sbjct: 183 KKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIE 242
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKYM 231
G + +I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 243 RGIGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYC 302
Query: 232 TDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T G++L+ D L++ S I+LDE HER + +DVL K L F+ + ++
Sbjct: 303 TTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKV 354
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/100 (36%), Positives = 65/100 (65%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G + I T ++L ++ D +I+P++S +P+ QT++F+ PPG RK+VIATNI
Sbjct: 489 GWDNISTLHDLLMSQVM-FKSD--RFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNI 545
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 546 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 585
Score = 108 (43.1 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S+
Sbjct: 536 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 585
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 273 (101.2 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 58/150 (38%), Positives = 92/150 (61%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-----TARGK 182
++++RQ LP++K + +++ + +++++V GETGSGK+TQ+ +L E T +
Sbjct: 562 LLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCN 621
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV +E GC G GY IR E S T + Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L N S +++DE HER++ +D L
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHERSVQSDFL 711
Score = 146 (56.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F P G RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 897 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 956
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 957 SQMSSLVETFVSK 969
Score = 111 (44.1 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 920 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 969
Score = 41 (19.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 144 LIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
L+KAV + +G+ K+ IT+ LA TA+GK
Sbjct: 1212 LLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGK 1250
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 288 (106.4 bits), Expect = 8.3e-31, Sum P(2) = 8.3e-31
Identities = 58/143 (40%), Positives = 94/143 (65%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR---GKIG 184
++++R+ LPI+K K+ ++ + +Q++IV G+ GK++Q+ Q+ AE + G +
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVV 114
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQ + A+ +A RVA+E +G EVGY I FE+C +SET+++Y TD ML RE + +
Sbjct: 115 CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNP 174
Query: 245 DLNNYSVIMLDEAHERTIHTDVL 267
L +Y VI+LD+ ER+I TDVL
Sbjct: 175 FLGSYGVIILDDVQERSIATDVL 197
Score = 145 (56.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEA---APPGSRKVVIAT 61
+++I+ A EI+ + +L PD+ EL+++P+Y + EA R+VV+
Sbjct: 282 EQDIEKAYEIVCQEGTNLNPDLGELVVVPLYPKEKCALFKPNDEAEKRCQVYQRRVVLTA 341
Query: 62 NIAETSLTIDGIFYVVDPGFVKQK-VYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
+ E+ + + + +V+D G ++K VY+ + DSLV+ PISQ E +K V+G SS
Sbjct: 342 SSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGS--SSS 399
Query: 121 GK 122
GK
Sbjct: 400 GK 401
Score = 86 (35.3 bits), Expect = 8.3e-31, Sum P(2) = 8.3e-31
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 267 LFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVK 326
L+ K + FK N E Y+ RVV+ + E+ + + + +V+D G +
Sbjct: 311 LYPKEKCALFKPNDEAEKRCQVYQR-------RVVLTASSGESLIWSNTVRFVIDVGVER 363
Query: 327 QK-VYNSKTGMDSLVVTPISQ 346
+K VY+ + DSLV+ PISQ
Sbjct: 364 RKKVYSPRIRADSLVLQPISQ 384
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 283 (104.7 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 58/143 (40%), Positives = 92/143 (64%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPR 189
+ +++LPI + + +L +A+ ++++IV G+TG GK+TQ+ QYL + G+ + I CTQPR
Sbjct: 141 QTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQPR 197
Query: 190 RVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNY 249
R+A +S+ KRVA E G V + IRFE + T I ++T+G+LLR+ V +L+ Y
Sbjct: 198 RLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQY 257
Query: 250 SVIMLDEAHERTIHTDVLFDPTK 272
++LDE HER + D L TK
Sbjct: 258 DALILDEIHERNLFGDFLLGVTK 280
Score = 166 (63.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 45/156 (28%), Positives = 80/156 (51%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
V G EI++ E ++E + ++LP++S Q+++F+ AP G RK +++T
Sbjct: 379 VSGVNEIESVVEAVHE----YATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVST 434
Query: 62 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFG 121
NIAETSLT+DG+ +VVD G VK+ +++ L +S+ + +K G ++ G
Sbjct: 435 NIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAG--RTGPG 492
Query: 122 KKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVI 157
L EQ + Y E+ + D +L ++
Sbjct: 493 VCFRLYTAEQYNAFEAYPTP-EIYRVPLDTMLLQMV 527
Score = 96 (38.9 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 17/34 (50%), Positives = 28/34 (82%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 332
+ +++TNIAETSLT+DG+ +VVD G VK+ +++
Sbjct: 429 KCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDA 462
Score = 38 (18.4 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 260 RTIHTDVLFDPTKLSKFKKNQRLE 283
R + + FDP +L+ +++ RL+
Sbjct: 755 RDVDFRLRFDPRQLALLERSSRLD 778
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 282 (104.3 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 68/191 (35%), Positives = 112/191 (58%)
Query: 83 KQKVYNSKTGMDSLVVTPISQD-LPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLK 141
K+ + NS + T IS+D L ++ KSS K L R+ LP +K +
Sbjct: 557 KRSINNSSSR--KFTKTTISEDTLSVLREEYTKRIKSSEYKSMQLV----REQLPAWKKQ 610
Query: 142 HELIKAVSDNQILIVIGETGSGKTTQITQYLA-----EAGFTARGKIGCTQPRRVAAMSV 196
+I ++ N+++++ GETGSGK+TQ+ Q++ E G + KI CTQPRR++A+ +
Sbjct: 611 KVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISAIGL 670
Query: 197 AKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDE 256
A+RV++E G+EVGY IR + T + T IK+MT G+L+R + +++++DE
Sbjct: 671 AERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNARTMLENTIVVIDE 730
Query: 257 AHERTIHTDVL 267
HER+I TD++
Sbjct: 731 VHERSIDTDLI 741
Score = 159 (61.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G EI+ C +L + + ++LP++SAL E Q R+F+ G RKVV++TNI
Sbjct: 872 GVGEINKCCNLLANKSNEA-----DFMVLPLHSALTPEDQKRVFKKYH-GKRKVVVSTNI 925
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKK 123
AETS+TID +D G K YN K L+ + IS+ + ++ G + K
Sbjct: 926 AETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYK 985
Query: 124 T-NLTIVEQRQ-SLPIYKLK 141
+ + E S+PI ++K
Sbjct: 986 LFSKNLYENDMISMPIPEIK 1005
Score = 98 (39.6 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV++TNIAETS+TID +D G K YN K L+ + IS+
Sbjct: 918 KVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISK 965
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 265 (98.3 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 60/177 (33%), Positives = 99/177 (55%)
Query: 93 MDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQ 152
MD + ++ + K H+ K + + + R SLP K +++K++S
Sbjct: 139 MDEFLTETQTKQMHTTKGHISDRMVIPPKSKCSKELQKVRNSLPASKYCDQVLKSISSCN 198
Query: 153 ILIVIGETGSGKTTQITQYLAEAGF--TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQ 210
++I+ G TG GKTTQ+ Q++ + ++ TQPRR+AA+S+A+RVA E G +G+
Sbjct: 199 VVIISGGTGCGKTTQVPQFILDEAHENNKHVRVMVTQPRRIAAISIAERVARERGEPIGR 258
Query: 211 EVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
VGY +R + S +T++ Y T G+LLR D + + I++DE HER I+TD L
Sbjct: 259 TVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTSDPVASGITHIVMDEIHEREINTDYL 315
Score = 172 (65.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 46/172 (26%), Positives = 95/172 (55%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G E+I + + + K+ ++ +I+LP++S + S IF++ P +RK+++ATNI
Sbjct: 653 GYEDIQQMLKAI-DCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRKIILATNI 711
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKK 123
AE S+TI+ + +VVD G VK+K ++ + + +L V PI++ + + G + + G
Sbjct: 712 AEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAG--RVANGYC 769
Query: 124 TNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
L ++ S+P ++ A+ D + + + + KT +I+++L+ A
Sbjct: 770 IRLYTEQEYNSMPETQIAEMKRAAIYD---VTLHAKLFAPKTLKISEFLSLA 818
Score = 115 (45.5 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++++ATNIAE S+TI+ + +VVD G VK+K ++ + + +L V PI++
Sbjct: 704 KIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIAR 751
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 268 (99.4 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 62/168 (36%), Positives = 101/168 (60%)
Query: 116 KKSSFGKKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYL 172
KK K+ N +E R+ LP Y ++ EL++ +S N++L++ GETG GKTTQ+TQ++
Sbjct: 198 KKDQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFI 257
Query: 173 AEAGFTARG-----KIGCTQPRRVAAMSVAKRVAEEFGCRLGQ--EVGYTIRFED-CTSS 224
+ F RG ++ CTQPRR++A+SVA+RVA E +G+ GY IR +
Sbjct: 258 LD-DFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRK 316
Query: 225 ETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
+ + Y T G++L+ D L++ + ++LDE HER++ +D+L K
Sbjct: 317 QGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVK 364
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 38/107 (35%), Positives = 65/107 (60%)
Query: 4 GQEEIDTACEILY-ERMKSLGPDVPELIILPVYSALPSEMQTRI-------FEAAPPGSR 55
G + I T ++L ++M G II+P++S +P+ QT++ F+ PPG R
Sbjct: 511 GWDNISTLNDLLMSDQMFKSGRY--RFIIIPLHSLMPTVSQTQVISLFPQVFKKPPPGVR 568
Query: 56 KVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPIS 102
K+VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S
Sbjct: 569 KIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVS 615
Score = 107 (42.7 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPIS 345
+ ++VIATNIAETS+TID + YV+D G +K+ ++++ + ++ +S
Sbjct: 567 VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVS 615
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 264 (98.0 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 60/149 (40%), Positives = 96/149 (64%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE----AGFTARGKI 183
+++ R +LPI ++K+ +++ + + +L+V GETGSGKTTQ+ Q++ + +G I
Sbjct: 607 MLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNI 666
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRL--GQE---VGYTIRFEDCTSSETLIKYMTDGMLLR 238
CTQPRR+AA+SVA+RVA+E C G + VGY +R E S +T + + T G+LLR
Sbjct: 667 ICTQPRRIAAISVAQRVADE-RCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLR 725
Query: 239 ECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ D LN+ + I++DE HER++ D L
Sbjct: 726 KLAGDRTLNDVTHIIVDEVHERSLLGDFL 754
Score = 170 (64.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 41/100 (41%), Positives = 58/100 (58%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G EI ++L + GP L LP++S++ S Q ++F P G RKV+ ATNI
Sbjct: 924 GVAEIYMLLDMLAASYRFRGPAADWL--LPLHSSIASSEQRKVFLRPPKGLRKVIAATNI 981
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + YV+D G K+ YN + + S+V ISQ
Sbjct: 982 AETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQ 1021
Score = 115 (45.5 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ +V+ ATNIAETS+TID + YV+D G K+ YN + + S+V ISQ
Sbjct: 972 LRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQ 1021
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 267 (99.0 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 56/150 (37%), Positives = 92/150 (61%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF-----TARGK 182
++++RQ LP++K + +++ + +++++V GETGSGK+TQ+ +L E ++
Sbjct: 565 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCN 624
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV +E GC G GY IR E T + Y T G+LL
Sbjct: 625 IVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLL 684
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L+N S +++DE HER++ +D L
Sbjct: 685 RKLQEDGLLSNVSHVIVDEVHERSVQSDFL 714
Score = 154 (59.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 960 SQMSSLVETFVSK 972
Score = 111 (44.1 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Score = 45 (20.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 116 KKSSFGKKTNLTIVE-QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
K + F T T E R S + + L+KAV + +G+ K+ +T+ LA
Sbjct: 1186 KAAGFSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLAC 1245
Query: 175 AGFTARGK 182
TA+GK
Sbjct: 1246 IVETAQGK 1253
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 268 (99.4 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 68/179 (37%), Positives = 102/179 (56%)
Query: 104 DLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKL--KHELIKAVSDNQILIVIGETG 161
DL E K + KKS + + R+ LP Y + K EL+ +++N++ ++ GETG
Sbjct: 158 DLDEQLKEDLRKKKSD---PRYIEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETG 214
Query: 162 SGKTTQITQYLAEAGFTARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGY 214
GKTTQ+TQ++ + + RGK I CTQPRR++A+SVA+RVA E C G+ GY
Sbjct: 215 CGKTTQVTQFILD-DYIERGKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGY 273
Query: 215 TIRFED-CTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
IR + + I Y T G++L+ D L++ S ++LDE HER + +DVL K
Sbjct: 274 QIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIK 332
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/100 (36%), Positives = 65/100 (65%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G + I T ++L ++ D II+P++S +P+ QT++F+ PPG RK+VIATNI
Sbjct: 478 GWDNISTLHDLLMSQVM-FKSD--RFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNI 534
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AETS+TID + +V+D G +K+ ++++ + ++ +S+
Sbjct: 535 AETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSK 574
Score = 106 (42.4 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 18/50 (36%), Positives = 36/50 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++VIATNIAETS+TID + +V+D G +K+ ++++ + ++ +S+
Sbjct: 525 VRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSK 574
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 279 (103.3 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 61/150 (40%), Positives = 95/150 (63%)
Query: 129 VEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE----AGFTARGKIG 184
+E R+ LP K ++I+AV +NQ+++++G TG GKTTQ+ Q L + G + +I
Sbjct: 147 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRII 206
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETL-IKYMTDGMLLRECLVD 243
CTQPRR++A+++A+ V+ E LG VGY IR E + E I Y T G+LL++ D
Sbjct: 207 CTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD 266
Query: 244 LDLNNYSVIMLDEAHERTIHTDVLFDPTKL 273
++N SV++LDE HER++ TD+L K+
Sbjct: 267 PLMHNLSVLILDEIHERSVETDLLMGLLKV 296
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPE-LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
G ++I IL + S G + + + P++S + S Q +F P G RKV+I+T
Sbjct: 431 GYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTI 490
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSL 96
IAETS+TID + YV++ G K Y+ +T + SL
Sbjct: 491 IAETSVTIDDVVYVINSGRTKATNYDIETNIQSL 524
Score = 94 (38.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSL 339
+ P A + +V+I+T IAETS+TID + YV++ G K Y+ +T + SL
Sbjct: 475 FRRPPAGQ-RKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSL 524
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 266 (98.7 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 59/150 (39%), Positives = 92/150 (61%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT----ARG-K 182
++++RQ LP++K + +++ + +++++V GETGSGK+TQ+ +L E AR
Sbjct: 564 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCN 623
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV EE GC G GY IR E S T + Y T G+LL
Sbjct: 624 IVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 683
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L + S +++DE HER++ +D L
Sbjct: 684 RKLQEDGLLADVSHVIVDEVHERSVQSDFL 713
Score = 153 (58.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 899 VIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 958
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 959 SQMSSLVETFVSK 971
Score = 111 (44.1 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 922 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 971
Score = 45 (20.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 144 LIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEE 203
L+KAV + +G+ K+ +T+ LA TA+GK +V SV R +
Sbjct: 1211 LLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKA------QVHPSSV-NRDLQT 1263
Query: 204 FGCRLGQE-VGYT 215
+G L QE V YT
Sbjct: 1264 YGWLLYQEKVRYT 1276
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 263 (97.6 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 59/150 (39%), Positives = 92/150 (61%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT----ARG-K 182
++++RQ LP++K + +++ + +++++V GETGSGK+TQ+ +L E AR
Sbjct: 565 LLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCN 624
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQE-----VGYTIRFEDCTSSETLIKYMTDGMLL 237
I CTQPRR++A+S+A RV EE GC G GY IR E S T + Y T G+LL
Sbjct: 625 IVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 684
Query: 238 RECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
R+ D L + S +++DE HER++ +D L
Sbjct: 685 RKLQEDGLLADVSHVIVDEVHERSVQSDFL 714
Score = 153 (58.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
++ ++S L ++ Q F PPG RK+V+ATNIAET +TI + +V+D G K+ Y+
Sbjct: 900 LIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 91 TGMDSLVVTPISQ 103
+ M SLV T +S+
Sbjct: 960 SQMSSLVETFVSK 972
Score = 111 (44.1 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ ++V+ATNIAET +TI + +V+D G K+ Y+ + M SLV T +S+
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Score = 42 (19.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 144 LIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
L+KAV + +G+ K+ +T+ LA TA+GK
Sbjct: 1212 LLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGK 1250
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 343 (125.8 bits), Expect = 7.1e-30, P = 7.1e-30
Identities = 81/218 (37%), Positives = 129/218 (59%)
Query: 121 GKKTNLTIV-------EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLA 173
G+KT TI+ E R +LPI + +++ + N ++I+ G TGSGKTTQ+ Q+L
Sbjct: 377 GRKTTYTIINRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLF 436
Query: 174 EAGFTAR-----GKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLI 228
EAGF++ G I TQPRRVAA+S+AKRV+EE +V Y IRF+ + +T I
Sbjct: 437 EAGFSSPESENPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAI 495
Query: 229 KYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNK 288
K+MTDG+LLRE D L YS +++DEAHER+++TD+L LS+ + +R ++
Sbjct: 496 KFMTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLG--LLSRIVRLRREMSKSDQ 553
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVK 326
+P + ++++ + T + + + + V P +K
Sbjct: 554 KVKP----LKLIIMSATLRVTDFSENKLLFSVPPPIIK 587
Score = 182 (69.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 29 LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
+ +LP+YS L +E Q ++F+++P G R ++ATN+AETS+TI I YVVD G K++VYN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 89 SKTGMDSLVVTPISQ 103
KT + V IS+
Sbjct: 762 EKTSVQKFEVRWISK 776
Score = 117 (46.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 301 VIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++ATN+AETS+TI I YVVD G K++VYN KT + V IS+
Sbjct: 731 IVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISK 776
Score = 58 (25.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 36/182 (19%), Positives = 74/182 (40%)
Query: 115 GKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE 174
GK+++ +K +++E++ LP+ L K V + ++ + +T +Y
Sbjct: 129 GKQATAKEKLKKSLLEEKLGLPLSDADSRLYKVVD---VETTTTKSSTAETNAPEKYSTR 185
Query: 175 AGFTARGKIGCTQPR---RVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYM 231
+GF G + + + K+ +G L ++ Y ED S+++ ++
Sbjct: 186 SGFGFGFSTGTNESEITPNIKVLPPKKKKNASWGKMLNEDPEYDSAEEDYLSTDSE-EFS 244
Query: 232 TDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEE 291
D E + D N S +A E+T+ DV+ + Q+L+P + E
Sbjct: 245 EDSDNSSE--ENKDTNEPST---KDA-EKTVPEDVV-------NLRSEQKLQPSFGHPEF 291
Query: 292 PN 293
N
Sbjct: 292 EN 293
Score = 44 (20.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 4 GQEEIDTACEILYER-MKSLGP 24
GQ+E++ C++L +R ++S P
Sbjct: 633 GQQEVEQLCQMLRKRFVRSFRP 654
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 276 (102.2 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
Identities = 60/145 (41%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE----AGFTARGKI 183
I ++R LPI+K + LI+++ +NQI+I++G+TG GKTTQI Q++ E +G I
Sbjct: 710 IYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNI 769
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETL-IKYMTDGMLLRECLV 242
TQPRR++ + A+R+A E ++G VGY IRF++ T + T G+LL+
Sbjct: 770 VMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYS 829
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
D+ L+N S + +DE HER IHTD L
Sbjct: 830 DMKLHNVSHLFIDEVHERDIHTDFL 854
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G E+I E++ R + + E +ILP++S++ ++Q ++FE PP RK+V++TNI
Sbjct: 958 GWEDISQTRELM--RRHPMLRNENEFLILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNI 1015
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSK 90
AETS+TI+ + YV+D VK K + ++
Sbjct: 1016 AETSITINDVVYVIDSAKVKLKYHETQ 1042
Score = 98 (39.6 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 333
+E+P +I ++V++TNIAETS+TI+ + YV+D VK K + ++
Sbjct: 999 FEKPPP-KIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQ 1042
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 281 (104.0 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 58/151 (38%), Positives = 99/151 (65%)
Query: 129 VEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK----IG 184
V +R+ LP ++ + +++ A+ +Q++++ GETGSGK+TQ+ Q++ + ++ K +
Sbjct: 571 VREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVV 630
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVD- 243
CTQPRR++A+S+A+RVA E +G+EVGY++ E S ETL+++ T G+LLR
Sbjct: 631 CTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHG 690
Query: 244 LD-LNNYSVIMLDEAHERTIHTDVLFDPTKL 273
L L+ S +++DE HER+I D+L KL
Sbjct: 691 LGFLSTLSCVVVDEVHERSIENDILLTLLKL 721
Score = 120 (47.3 bits), Expect = 0.00093, P = 0.00093
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 88
+LP++++L + Q R F+ RK++ ATNIAETS+TID + V+D G VKQ Y+
Sbjct: 843 VLPLHASLNTSEQRRCFKTYT--KRKIICATNIAETSITIDDVVAVIDSGRVKQIDYD 898
Score = 91 (37.1 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 331
+++ ATNIAETS+TID + V+D G VKQ Y+
Sbjct: 866 KIICATNIAETSITIDDVVAVIDSGRVKQIDYD 898
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 340 (124.7 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 87/246 (35%), Positives = 141/246 (57%)
Query: 88 NSKTGMDSLVVT------PISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLK 141
N +T +D +VV ++D+ + +K +++ I + R LPI+ +
Sbjct: 184 NPETNLDQIVVKREDDEESDNEDILALPTTTVINRKKVIVERSK-EIQKSRAELPIFAEE 242
Query: 142 HELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQPRRVAAMSVAKRV 200
+++A+++N + +V GETGSGKTTQI Q+L EAG+ + G+ IG T+PRRVAA+++A+RV
Sbjct: 243 MRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMAQRV 302
Query: 201 AEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHER 260
E EV Y IR+E S T I +MTDG+L++E D+ L YSVI++DEAHER
Sbjct: 303 GVELA--KPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHER 360
Query: 261 TIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVV 320
++++DVL LS R+ PL +K P + V+++ + T +F ++
Sbjct: 361 SMYSDVLIG--MLS------RIVPLRSKTARP----LRLVIMSATLRLDDFTHKKLFPLL 408
Query: 321 DPGFVK 326
P +K
Sbjct: 409 TPKVIK 414
Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 25 DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQ 84
D L LP+YS L Q R+F+ P G R VI+TN+AETSLTI G+ YV+D GF K+
Sbjct: 571 DCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKR 630
Query: 85 KVYNSKTGMDSLVVTPISQ 103
++Y+S TG+ V ISQ
Sbjct: 631 RLYDSITGVSRFAVCRISQ 649
Score = 133 (51.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 290 EEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
E P R+ VI+TN+AETSLTI G+ YV+D GF K+++Y+S TG+ V ISQ
Sbjct: 595 ETPAGMRLC--VISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQ 649
Score = 44 (20.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 109 KKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQIL 154
KK G+KS+ G K N ++++ + K + AV + L
Sbjct: 29 KKLEKSGEKSATGGKKNRNFAKEKEVAKLTKQAKRKLAAVQSRKAL 74
>UNIPROTKB|J3KTK0 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000584385 Uniprot:J3KTK0
Length = 173
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 67/115 (58%), Positives = 84/115 (73%)
Query: 172 LAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYM 231
+A+ GF+ G IG TQPR+VAA+SVA+RVAEE C LG +VGY +RF+DC+S ET IKYM
Sbjct: 34 IADRGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYM 93
Query: 232 TDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRLEPL 285
TDG LL+ L D +L +SVI+LDEAHERT+ TD+LF K L + K R E L
Sbjct: 94 TDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHL 148
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 70/118 (59%), Positives = 88/118 (74%)
Query: 168 ITQYLAEAGFTARGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-E 225
+ +YLAEAG+TA G++ G TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT
Sbjct: 52 VFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA 111
Query: 226 TLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
T IK++TDGML+RE +VD L YSVIMLDEAHERT++TD+ K + K + + RL
Sbjct: 112 TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRL 169
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 330 (121.2 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 67/139 (48%), Positives = 101/139 (72%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKI-GCTQP 188
E+R LPI + +++AV+++ I+IV GETGSGKTTQ+ Q+L EAG+++ I G T+P
Sbjct: 243 EERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVTEP 302
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNN 248
RRVAA+++++RVA+E + V Y IR+E + ET IK+MTDG+LL+E D L
Sbjct: 303 RRVAAVAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLK 361
Query: 249 YSVIMLDEAHERTIHTDVL 267
Y V+++DEAHER+++TD+L
Sbjct: 362 YKVVIIDEAHERSVYTDIL 380
Score = 193 (73.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 24 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFV 82
PD L +LP+YS L E Q ++F+ P G+R VIATN+AETSLTI GI YVVD G V
Sbjct: 575 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKV 634
Query: 83 KQKVYNSKTGMDSLVVTPISQ 103
K++ Y+ TG+ S VT +SQ
Sbjct: 635 KKRYYDRVTGVSSFRVTWVSQ 655
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 43/105 (40%), Positives = 59/105 (56%)
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVV 301
+DLDL + S E + ++ VL + L+ K+ Q +P P R+ V
Sbjct: 560 LDLDLGD-SEANEGEQPDASLPLHVLPLYSLLAPEKQAQVFKP------PPEGTRLC--V 610
Query: 302 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
IATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT +SQ
Sbjct: 611 IATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQ 655
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 260 (96.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 56/146 (38%), Positives = 92/146 (63%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIG 184
I E R LPI + +I AV NQ++++ GETG GKTTQ+ QYL + + ++ KI
Sbjct: 210 IFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKII 269
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL--- 241
CTQPRR++A+SV+ R++ E G +G+ VGY +R + E+ + + T+G+LLR +
Sbjct: 270 CTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKG 329
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
V+ + + + I++DE HER ++D +
Sbjct: 330 VNSSVPDITHIIVDEIHERDSYSDFM 355
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 38/101 (37%), Positives = 63/101 (62%)
Query: 4 GQEEIDTACE-ILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
G EEI E +L +R + + IIL ++S +P+E Q ++F P G RK+V+ATN
Sbjct: 584 GWEEISKTKEKLLDDRFFAHSA---KFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATN 640
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAE+++TID + YV+D G +K+K Y+ + +L + +S+
Sbjct: 641 IAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSK 681
Score = 102 (41.0 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 19/48 (39%), Positives = 35/48 (72%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++V+ATNIAE+++TID + YV+D G +K+K Y+ + +L + +S+
Sbjct: 634 KIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSK 681
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 328 (120.5 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 66/139 (47%), Positives = 101/139 (72%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQP 188
E+R LPI + +++AV+++ I+I+ GETGSGKTTQ+ Q+L EAG+++ IG T+P
Sbjct: 245 EERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVTEP 304
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNN 248
RRVAA+++++RVA+E + V Y IR+E + ET IK+MTDG+LL+E D L
Sbjct: 305 RRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLK 363
Query: 249 YSVIMLDEAHERTIHTDVL 267
Y V+++DEAHER+++TD+L
Sbjct: 364 YKVVIIDEAHERSVYTDIL 382
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 24 PDVP-ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFV 82
PD L +LP+YS L E Q ++F+ P G+R V+ATN+AETSLTI GI YVVD G V
Sbjct: 580 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 639
Query: 83 KQKVYNSKTGMDSLVVTPISQ 103
K++ Y+ TG+ S VT +SQ
Sbjct: 640 KKRHYDRVTGVSSFRVTWVSQ 660
Score = 129 (50.5 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 41/105 (39%), Positives = 59/105 (56%)
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVV 301
+DLDL ++ E + ++ VL + L+ K+ Q +P P R+ V
Sbjct: 565 LDLDLGDHGADG-GEQPDASLPLHVLPLYSLLAPEKQAQVFQP------PPEGTRLC--V 615
Query: 302 IATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+ATN+AETSLTI GI YVVD G VK++ Y+ TG+ S VT +SQ
Sbjct: 616 VATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSSFRVTWVSQ 660
Score = 45 (20.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 112 VIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQ 152
V+ GKK KKT + +++ P+ K + ++++ + D +
Sbjct: 50 VLPGKKK---KKTKAPPLSKKEKKPLTKKERKILQRILDQK 87
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 274 (101.5 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 61/146 (41%), Positives = 96/146 (65%)
Query: 128 IVEQRQSLPIYKLKHELIKAV--SDNQILIVIGETGSGKTTQITQYLAE----AGFTARG 181
++EQR++LPI+ + ++ + S + +++V GE GSGK+TQI Q+ AE GF G
Sbjct: 38 LLEQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFK-EG 96
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
++ TQP +AA+S+A RVA+E LGQEVGY+I EDCT +TL+++ D +LL+E
Sbjct: 97 RVTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVA 156
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
+ V++LDEA ER++ +D+L
Sbjct: 157 STRGTGAWGVLVLDEAQERSVASDLL 182
Score = 117 (46.2 bits), Expect = 0.00095, P = 0.00095
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 64
+EEI CE L ++ L P +LP++ +Q +E G+RKVV+ +A
Sbjct: 271 EEEILQCCESLSREVEPLALRGPPPRVLPLHPGHGPAVQAA-YEDIDLGARKVVVTHWLA 329
Query: 65 ETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
+ S ++ I +V+D G + VYN + +S V+ PIS+
Sbjct: 330 DFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISR 368
Score = 75 (31.5 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 298 SRVVIATN-IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+R V+ T+ +A+ S ++ I +V+D G + VYN + +S V+ PIS+
Sbjct: 319 ARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISR 368
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 260 (96.6 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 60/144 (41%), Positives = 91/144 (63%)
Query: 129 VEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE----AGFTARGKIG 184
+E R+ LPI ++ E++ A++DN ++I+ G TG GKTTQI QY+ + +G I
Sbjct: 378 LEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIY 437
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSET-LIKYMTDGMLLRECLVD 243
TQPRR++A+SVA+RVA E +LG VGY++RFE I + T G+LLR+ ++
Sbjct: 438 VTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK--LE 495
Query: 244 LDLNNYSVIMLDEAHERTIHTDVL 267
L S I++DE HER +++D L
Sbjct: 496 AGLRGVSHIIVDEIHERDVNSDFL 519
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 25 DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQ 84
D + ILP +S +P + Q ++FE P G K++++TNIAETS+TID I +V+D +
Sbjct: 681 DTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARM 740
Query: 85 KVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
K++ S + S S+ E +K G + F
Sbjct: 741 KLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGF 776
Score = 97 (39.2 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDS 338
K EP +++++++TNIAETS+TID I +V+D + K++ S + S
Sbjct: 701 KVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTS 751
>RGD|1563192 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001374
InterPro:IPR011545 Pfam:PF00270 Pfam:PF01424 PROSITE:PS51061
RGD:1563192 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00700000104393
GO:GO:0008026 OrthoDB:EOG4JWVCN IPI:IPI00367844 RefSeq:XP_225959.5
Ensembl:ENSRNOT00000060098 UCSC:RGD:1563192 NextBio:657385
Uniprot:D3ZIV8
Length = 394
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 66/146 (45%), Positives = 101/146 (69%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIGCTQP 188
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F G +I CTQP
Sbjct: 194 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQP 252
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV-DLDLN 247
RR+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L+
Sbjct: 253 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 312
Query: 248 NYSVIMLDEAHERTIHTDVLFDPTKL 273
+ +++DE HER +D L TKL
Sbjct: 313 TVTHVIVDEVHERDRFSDFLL--TKL 336
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 322 (118.4 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 64/134 (47%), Positives = 91/134 (67%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAA 193
+LP+ + K ++++A+ D+Q++IV GETGSGKTTQ+ + E G +G IG TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIM 253
+VA R+AEE G +GY +RF D S T++K MTDG+LL E D L Y I+
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 254 LDEAHERTIHTDVL 267
+DEAHER+++ D L
Sbjct: 196 IDEAHERSLNIDFL 209
Score = 166 (63.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP+Y+ L + Q R+F++ R++V+ATN+AETSLT+ GI YV+DPG + Y+ +
Sbjct: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377
Query: 91 TGMDSLVVTPISQ 103
T + L + PISQ
Sbjct: 378 TKVQRLPIEPISQ 390
Score = 134 (52.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 37/110 (33%), Positives = 59/110 (53%)
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRI----- 297
+L ++ I++ + ER I D KL+ ++ + PLY + R+
Sbjct: 284 ELSQESHGDILIFMSGEREIR-DTADALNKLNL--RHTEILPLYARLSNSEQNRVFQSHS 340
Query: 298 -SRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
R+V+ATN+AETSLT+ GI YV+DPG + Y+ +T + L + PISQ
Sbjct: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390
Score = 41 (19.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 13 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAP 51
+ L +K L P P+L I+ + + E +R F AP
Sbjct: 207 DFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 270 (100.1 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 61/153 (39%), Positives = 93/153 (60%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGC----TQPR 189
+LPI + E+I V N + ++ G+TGSGKTTQ+ QY+ + AR C TQPR
Sbjct: 141 TLPITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILD--HYARANRWCNIVVTQPR 198
Query: 190 RVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNY 249
R+AA+S+A+RVA+E G RLG VGY + + S +T + ++T G+LL++ + ++N +
Sbjct: 199 RIAAISIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQKLINTKNMNQF 258
Query: 250 SVIMLDEAHERTIHTD-VLFDPTKLSKFKKNQR 281
+ ++LDE HER TD L KL + N R
Sbjct: 259 THVILDEVHERDQETDFALLVARKL--LRSNSR 289
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/100 (36%), Positives = 55/100 (55%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
G EI+T E+L +L +LP++S + SE Q ++F P RKV+++TNI
Sbjct: 400 GLAEINTLDELLAHETTRY-----KLWVLPLHSTITSEEQAQVFVPPRPHQRKVILSTNI 454
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
AE+S+T+ I YV+D K V + +T SL + SQ
Sbjct: 455 AESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQ 494
Score = 82 (33.9 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+V+++TNIAE+S+T+ I YV+D K V + +T SL + SQ
Sbjct: 447 KVILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQ 494
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 258 (95.9 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 58/149 (38%), Positives = 94/149 (63%)
Query: 125 NL-TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TA 179
NL +++++R+ LP+ K + E+++A+S N ++I+ G TG GKTTQ+ QY+ + A
Sbjct: 380 NLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAA 439
Query: 180 RGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLR 238
I TQPRR++A++VA+RVA E G G+ GY++RFE I + T G+LLR
Sbjct: 440 ECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLR 499
Query: 239 ECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ ++ + S +++DE HER I+TD L
Sbjct: 500 K--LEAGIRGISHVIVDEIHERDINTDFL 526
Score = 151 (58.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D K K++ +
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 745
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 746 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 775
Score = 90 (36.7 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 16/40 (40%), Positives = 29/40 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
+++V+++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 709 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 748
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 261 (96.9 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 58/146 (39%), Positives = 93/146 (63%)
Query: 128 IVEQRQSLPIYKLKHELIKAV--SDNQILIVIGETGSGKTTQITQYLAE----AGFTARG 181
++EQR++LPI+ + ++ + S +++V G+ GSGK+TQI Q+ AE GF G
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT-G 93
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
++ TQP +AAMS+A RVA+E LG E+GY+I EDCT T++++ D + L+E
Sbjct: 94 QVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVA 153
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
+SV++LDEA ER++ +D+L
Sbjct: 154 STRGPGAWSVLILDEAQERSVASDLL 179
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 64
+EEI CE L M +L P +LP++ +QT ++E RK+V+ +A
Sbjct: 269 EEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLA 327
Query: 65 ETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
+ S ++ I +V+D G + VYN + +S V+ PIS+
Sbjct: 328 DFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISK 366
Score = 80 (33.2 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
YE+ + + ++V+ +A+ S ++ I +V+D G + VYN + +S V+ PIS+
Sbjct: 310 YEDTDV-SVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISK 366
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 257 (95.5 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 58/145 (40%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TARGKI 183
I+++R+ LP+ K + E+++A+S N ++IV G TG GKTTQ+ Q++ + A I
Sbjct: 377 ILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECNI 436
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLV 242
TQPRR++A+SVA+RVA E G G+ GY++RFE I + T G+LLR+ +
Sbjct: 437 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--L 494
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
+ + S +++DE HER I+TD L
Sbjct: 495 EAGIRGISHVIVDEIHERDINTDFL 519
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D K K++ +
Sbjct: 675 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 734
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 735 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 764
Score = 91 (37.1 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
K +P +++V+++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 689 KVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 737
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 268 (99.4 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 65/174 (37%), Positives = 102/174 (58%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQ--ILIVIGETGSGKTTQITQYLAE----AGFTARG 181
+++QRQ+LPI+ + ++ + N +++V GE GSGK+TQI Q+ AE GF +G
Sbjct: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQ-KG 96
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
++ TQP +AA S+A RVA+E LG EVGY+I EDCT TL+++ D +LL+E
Sbjct: 97 QVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVA 156
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL---FDPTKLSKFKKNQRLEPLYNKYEEP 292
+ V++LDEA ER++ +D L +L K + R+ + + EP
Sbjct: 157 STRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEP 210
Score = 72 (30.4 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
YE+ +A +VV+ +A+ S ++ I +V+D G + VYN + + V+ PIS+
Sbjct: 312 YEDMDA---RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISK 366
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 258 (95.9 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
Identities = 58/149 (38%), Positives = 94/149 (63%)
Query: 125 NL-TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TA 179
NL +++++R+ LP+ K + E+++A+S N ++I+ G TG GKTTQ+ QY+ + A
Sbjct: 379 NLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAA 438
Query: 180 RGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLR 238
I TQPRR++A++VA+RVA E G G+ GY++RFE I + T G+LLR
Sbjct: 439 ECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLR 498
Query: 239 ECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ ++ + S +++DE HER I+TD L
Sbjct: 499 K--LEAGIRGISHVIVDEIHERDINTDFL 525
Score = 151 (58.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D K K++ +
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 744
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 774
Score = 90 (36.7 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
Identities = 16/40 (40%), Positives = 29/40 (72%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
+++V+++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 708 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 747
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 255 (94.8 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 54/146 (36%), Positives = 91/146 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIG 184
I + R LPI K + AV NQ++++ GETG GKTTQ+ QYL + ++++ KI
Sbjct: 180 ITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIV 239
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
CTQPRR++AMSV++R++ E G +G+ +GY +R + + + + T+G+LLR +
Sbjct: 240 CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG 299
Query: 245 DLNNYSVI---MLDEAHERTIHTDVL 267
+++ S I ++DE HER ++D +
Sbjct: 300 SVSSVSDITHIIVDEIHERDCYSDFM 325
Score = 158 (60.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 25 DVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQ 84
D + I+ ++S +P+ Q ++F PPG RK+V+ATNIAE+++TID + YV+D G +K+
Sbjct: 579 DSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKE 638
Query: 85 KVYNSKTGMDSLVVTPISQ 103
K Y+ + +L + +S+
Sbjct: 639 KSYDPYNNVSTLQSSWVSK 657
Score = 103 (41.3 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 19/48 (39%), Positives = 35/48 (72%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
++V+ATNIAE+++TID + YV+D G +K+K Y+ + +L + +S+
Sbjct: 610 KIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 657
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 263 (97.6 bits), Expect = 7.3e-27, Sum P(2) = 7.3e-27
Identities = 59/145 (40%), Positives = 88/145 (60%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYL-----AEAGFTARGKIGC 185
QR LP + + L+ A++ Q+ ++ GETGSGK+TQ+ Q++ ++ FT KI C
Sbjct: 569 QRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTT--KIIC 626
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRR++A+S+A R+++E +G E GY IR E+ TSS T I + T G+LLR
Sbjct: 627 TQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKK 686
Query: 246 ---LNNYSVIMLDEAHERTIHTDVL 267
L N I++DE HER++ D L
Sbjct: 687 NGVLKNIGYILIDEVHERSVDADFL 711
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 28 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVY 87
+ + LP++S L S Q IF+ AP G RKVV++TNIAETS+TI V+D G K +
Sbjct: 847 KFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFF 906
Query: 88 NSKTGMDSLVVTPISQ 103
+ K L+ + SQ
Sbjct: 907 DHKLNTTKLIESWCSQ 922
Score = 82 (33.9 bits), Expect = 7.3e-27, Sum P(2) = 7.3e-27
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV++TNIAETS+TI V+D G K ++ K L+ + SQ
Sbjct: 875 KVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQ 922
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 263 (97.6 bits), Expect = 7.3e-27, Sum P(2) = 7.3e-27
Identities = 59/145 (40%), Positives = 88/145 (60%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYL-----AEAGFTARGKIGC 185
QR LP + + L+ A++ Q+ ++ GETGSGK+TQ+ Q++ ++ FT KI C
Sbjct: 569 QRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTT--KIIC 626
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
TQPRR++A+S+A R+++E +G E GY IR E+ TSS T I + T G+LLR
Sbjct: 627 TQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKK 686
Query: 246 ---LNNYSVIMLDEAHERTIHTDVL 267
L N I++DE HER++ D L
Sbjct: 687 NGVLKNIGYILIDEVHERSVDADFL 711
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 28 ELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVY 87
+ + LP++S L S Q IF+ AP G RKVV++TNIAETS+TI V+D G K +
Sbjct: 847 KFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFF 906
Query: 88 NSKTGMDSLVVTPISQ 103
+ K L+ + SQ
Sbjct: 907 DHKLNTTKLIESWCSQ 922
Score = 82 (33.9 bits), Expect = 7.3e-27, Sum P(2) = 7.3e-27
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
+VV++TNIAETS+TI V+D G K ++ K L+ + SQ
Sbjct: 875 KVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQ 922
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 256 (95.2 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 57/145 (39%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TARGKI 183
I+++R+ LP+ K + E+++A+S N ++I+ G TG GKTTQ+ Q++ + A I
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLV 242
TQPRR++A+SVA+RVA E G G+ GY++RFE I + T G+LLR+ +
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--L 498
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
+ + S +++DE HER I+TD L
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFL 523
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D K K++ +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 772
Score = 91 (37.1 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
K +P +++V+++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 697 KVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 745
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 256 (95.2 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 57/145 (39%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TARGKI 183
I+++R+ LP+ K + E+++A+S N ++I+ G TG GKTTQ+ Q++ + A I
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLV 242
TQPRR++A+SVA+RVA E G G+ GY++RFE I + T G+LLR+ +
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--L 498
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
+ + S +++DE HER I+TD L
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFL 523
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P E Q ++F+ P G KV+++TNIAETS+TI+ + YV+D K K++ +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 772
Score = 91 (37.1 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
K +P +++V+++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 697 KVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 745
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 256 (95.2 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 57/145 (39%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TARGKI 183
I+++R+ LP+ K + E+++A+S N ++I+ G TG GKTTQ+ Q++ + A I
Sbjct: 382 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 441
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSE-TLIKYMTDGMLLRECLV 242
TQPRR++A+SVA+RVA E G G+ GY++RFE I + T G+LLR+ +
Sbjct: 442 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRK--L 499
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
+ + S +++DE HER I+TD L
Sbjct: 500 EAGIRGISHVIVDEIHERDINTDFL 524
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 14 ILYERMKSL--GPDVPE--LIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLT 69
++Y K L PD ILP++S +P E Q ++F+ P G KV+++TNIAETS+T
Sbjct: 663 LIYTMQKHLEMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSIT 722
Query: 70 IDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
I+ + YV+D K K++ + M + S+ E +K G + F
Sbjct: 723 INDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGF 773
Score = 91 (37.1 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
K +P +++V+++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 698 KVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 746
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 264 (98.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 59/146 (40%), Positives = 93/146 (63%)
Query: 128 IVEQRQSLPIYKLKHELIKAV--SDNQILIVIGETGSGKTTQITQYLAE----AGFTARG 181
++EQR++LPI+ + ++ + S +++V GE GSGK+TQI Q+ AE GF G
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQT-G 93
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
++ TQP +AAMS+A RVA+E LG E+GY+I EDCT T++++ D + L+E
Sbjct: 94 QVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVA 153
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
+SV++LDEA ER++ +D+L
Sbjct: 154 STRGPGAWSVLVLDEAQERSVASDLL 179
Score = 68 (29.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 289 YEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
YE+ + + ++V+ +A+ S ++ I +V+D G + VYN + +S V+ IS+
Sbjct: 310 YEDTDV-SVRKIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISK 366
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 258 (95.9 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 59/146 (40%), Positives = 93/146 (63%)
Query: 128 IVEQRQSLPIYKLKHELIKAV--SDNQILIVIGETGSGKTTQITQYLAE----AGFTARG 181
++EQR+SLP++ + ++ + S + +++V GE G GK+TQI Q+ AE GF +G
Sbjct: 38 LLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQ-KG 96
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
+ TQP +AA+S+A RVA+E LG EVGY+I EDCT +TL+++ D +LL+E
Sbjct: 97 WVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVA 156
Query: 242 VDLDLNNYSVIMLDEAHERTIHTDVL 267
V++LDEA ER++ +D+L
Sbjct: 157 STRGTGARGVLILDEAQERSVASDLL 182
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/99 (30%), Positives = 55/99 (55%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIA 64
+EEI CE L +++SL P +LP++ +Q ++E G+RKVV+ +A
Sbjct: 271 EEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWLA 329
Query: 65 ETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
+ S ++ I +V+D G + VY+ + +S V+ P+S+
Sbjct: 330 DFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSK 368
Score = 70 (29.7 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 289 YEEPNAWRISRVVIATN-IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
YE+ + +R V+ T+ +A+ S ++ I +V+D G + VY+ + +S V+ P+S+
Sbjct: 312 YEDTESG--ARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSK 368
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 255 (94.8 bits), Expect = 9.8e-26, Sum P(2) = 9.8e-26
Identities = 56/145 (38%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TARGKI 183
++++R+ LP+ K + E+++A+S N ++I+ G TG GKTTQ+ Q++ + A I
Sbjct: 378 VLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNI 437
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLV 242
TQPRR++A+SVA+RVA E G G+ GY++RFE I + T G+LLR+ +
Sbjct: 438 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--L 495
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
+ + S +++DE HER I+TD L
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFL 520
Score = 150 (57.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P E Q ++F+ P G K++++TNIAETS+TI+ + YV+D K K++ +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 769
Score = 90 (36.7 bits), Expect = 9.8e-26, Sum P(2) = 9.8e-26
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
K +P +++++++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 694 KVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 742
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 255 (94.8 bits), Expect = 9.8e-26, Sum P(2) = 9.8e-26
Identities = 56/145 (38%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TARGKI 183
++++R+ LP+ K + E+++A+S N ++I+ G TG GKTTQ+ Q++ + A I
Sbjct: 378 VLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNI 437
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLV 242
TQPRR++A+SVA+RVA E G G+ GY++RFE I + T G+LLR+ +
Sbjct: 438 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--L 495
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
+ + S +++DE HER I+TD L
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFL 520
Score = 150 (57.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P E Q ++F+ P G K++++TNIAETS+TI+ + YV+D K K++ +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 769
Score = 90 (36.7 bits), Expect = 9.8e-26, Sum P(2) = 9.8e-26
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 288 KYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
K +P +++++++TNIAETS+TI+ + YV+D K K++ + M
Sbjct: 694 KVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNM 742
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 302 (111.4 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 66/147 (44%), Positives = 101/147 (68%)
Query: 132 RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG---KIGCTQP 188
RQSLP+++ + E++K + +N++++++GETGSGKTTQI Q+L + F G +I CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQP 247
Query: 189 RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDC-TSSETLIKYMTDGMLLRECLV-DLDL 246
RR+AA++VA+RVA E R+GQ +GY IR E S +TL+ + T+G+LLR + D L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTL 307
Query: 247 NNYSVIMLDEAHERTIHTDVLFDPTKL 273
+ + +++DE HER +D L TKL
Sbjct: 308 STVTHVIVDEVHERDRFSDFLL--TKL 332
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 29/101 (28%), Positives = 58/101 (57%)
Query: 4 GQEEI-DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATN 62
G +EI IL++ K + + ++S + + Q ++ + P G RK++++TN
Sbjct: 631 GYDEIVGLRDRILFDD-KRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTN 689
Query: 63 IAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 103
IAETS+T++ + +V+D G VK+K +++ + L + IS+
Sbjct: 690 IAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 730
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 255 (94.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 62/145 (42%), Positives = 90/145 (62%)
Query: 131 QRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT-ARG---KIGCT 186
QR SLP+ K + +L+ V + IVIG TGSGK+TQ+ Q + + RG +I C
Sbjct: 581 QRASLPMNKHRKQLLNLVEGSHFCIVIGATGSGKSTQVPQIILDDAIKQGRGADTRILCL 640
Query: 187 QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSET--LIKYMTDGMLLRECL--V 242
QPRR AAM VA+RVA E G RLG+ VG+ IRF+ ++ + ++T G+LL++ V
Sbjct: 641 QPRRAAAMWVAQRVASERGERLGESVGFRIRFDARLANRQGGTVSFVTLGILLKQLQDGV 700
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
L+ YS I++DE HER++ D+L
Sbjct: 701 QETLDMYSHIVIDEVHERSLELDLL 725
Score = 143 (55.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 51/180 (28%), Positives = 87/180 (48%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELI--------ILPVYSALPSEMQTRIFEAAPPGSR 55
G +EI + ++L +R SLG D ++ I ++SA+ + Q +IF+ P G R
Sbjct: 880 GIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFRIHFLHSAVSAAEQNKIFQKVPLGCR 939
Query: 56 KVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGG 115
++++A+NIAETS+TI + +VVD G + + Y+ T + + T ++ G
Sbjct: 940 RIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRITGMY-TGWQTKSKAMQRQGRAG 998
Query: 116 KKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
+ G L ++RQS+ L E++K N L V G G + +LA A
Sbjct: 999 RTQE-GHYYGLYSEQRRQSMKDDALP-EMLKLDLTNTCLSV---KGFGFRDSVADFLAAA 1053
Score = 87 (35.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKT 334
R+++A+NIAETS+TI + +VVD G + + Y+ T
Sbjct: 940 RIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRST 975
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 248 (92.4 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 51/116 (43%), Positives = 74/116 (63%)
Query: 4 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNI 63
GQEEI+ + + K L P +++LP+Y++LP Q R+F+ AP G RKV+I+TNI
Sbjct: 207 GQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNI 266
Query: 64 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSS 119
AETS+TI GI YVVD G VK K YN +G++ L V +S+ W++ G++ S
Sbjct: 267 AETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKT-QAWQRTGRAGREDS 321
Score = 215 (80.7 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPT 271
VGYT+RF+D TS +T IK++TDGMLLRE + D L YS ++LDEAHERTIHTDVLF
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 272 KLSKFKKNQRLEPL 285
K ++ K+ + L L
Sbjct: 121 KAAQ-KRRKELGKL 133
Score = 137 (53.3 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 292 PNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
P +R +V+I+TNIAETS+TI GI YVVD G VK K YN +G++ L V +S+
Sbjct: 254 PKGYR--KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 306
>UNIPROTKB|F1S4S9 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR006575
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00642
Pfam:PF05773 PROSITE:PS50103 SMART:SM00356 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR026290 PANTHER:PTHR11224 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU694750
Ensembl:ENSSSCT00000009281 OMA:HRYPYQA Uniprot:F1S4S9
Length = 745
Score = 293 (108.2 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 64/145 (44%), Positives = 92/145 (63%)
Query: 127 TIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTAR----GK 182
+I+++RQSLP ++ + ++K +S +Q+L+V G TG GKTTQI Q++ +
Sbjct: 462 SILQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVAN 521
Query: 183 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLV 242
I CTQPRR++A+SVA+RVA+E R+G VGY IR E SS T + Y T G+LLR
Sbjct: 522 IVCTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 581
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
D L + I++DE HERT +D L
Sbjct: 582 DTALQGVTHIIVDEVHERTEESDFL 606
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 243 (90.6 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 57/159 (35%), Positives = 91/159 (57%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE----AGFTARGKIGC 185
++ LP+ K ++ A+ N ++++ G+TG GKTT+I Q L E G AR +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 532
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSET-LIKYMTDGMLLRECLVDL 244
TQPRR++A+SVA+RVA+E G + + VGY +R E + + + T G+LLR+ +
Sbjct: 533 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNP 592
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L S +++DE HER ++TD L K + K + RL
Sbjct: 593 SLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRL 631
Score = 187 (70.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/157 (31%), Positives = 88/157 (56%)
Query: 19 MKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 78
++ LG ++LPV+S +P Q IF+ PPG RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 732 LEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVD 791
Query: 79 PGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIY 138
G K++ Y+ KT + L +S+ ++ G +S F +L + +P Y
Sbjct: 792 SGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAY--HLFPRSRLDKMPTY 849
Query: 139 KLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
++ E+++ +N L+V + + T + ++L++A
Sbjct: 850 QVP-EILRTPLEN--LVVQAKIHMPEKTAV-EFLSKA 882
Score = 106 (42.4 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 287 NKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
N ++ P + ++V+ATNIAETS+TI+ I +VVD G K++ Y+ KT + L +S+
Sbjct: 758 NIFQRPPPG-VRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSK 816
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 243 (90.6 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 57/159 (35%), Positives = 91/159 (57%)
Query: 130 EQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAE----AGFTARGKIGC 185
++ LP+ K ++ A+ N ++++ G+TG GKTT+I Q L E G AR +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 532
Query: 186 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSET-LIKYMTDGMLLRECLVDL 244
TQPRR++A+SVA+RVA+E G + + VGY +R E + + + T G+LLR+ +
Sbjct: 533 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNP 592
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK-LSKFKKNQRL 282
L S +++DE HER ++TD L K + K + RL
Sbjct: 593 SLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRL 631
Score = 187 (70.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/157 (31%), Positives = 88/157 (56%)
Query: 19 MKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVD 78
++ LG ++LPV+S +P Q IF+ PPG RK+V+ATNIAETS+TI+ I +VVD
Sbjct: 732 LEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVD 791
Query: 79 PGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIY 138
G K++ Y+ KT + L +S+ ++ G +S F +L + +P Y
Sbjct: 792 SGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAY--HLFPRSRLDKMPTY 849
Query: 139 KLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
++ E+++ +N L+V + + T + ++L++A
Sbjct: 850 QVP-EILRTPLEN--LVVQAKIHMPEKTAV-EFLSKA 882
Score = 106 (42.4 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 287 NKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 346
N ++ P + ++V+ATNIAETS+TI+ I +VVD G K++ Y+ KT + L +S+
Sbjct: 758 NIFQRPPPG-VRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSK 816
>UNIPROTKB|I3LRU8 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000027576 Uniprot:I3LRU8
Length = 439
Score = 284 (105.0 bits), Expect = 9.6e-25, P = 9.6e-25
Identities = 66/162 (40%), Positives = 97/162 (59%)
Query: 122 KKTNLTIVEQ---RQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFT 178
KKT+L +E R+ LP Y ++ EL+ + ++Q+ ++ GETG GKTTQ+TQ++ + +
Sbjct: 195 KKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYI 253
Query: 179 ARGK-----IGCTQPRRVAAMSVAKRVAEEFG--CRLGQEVGYTIRFED-CTSSETLIKY 230
RGK I CTQPRR++A+SVA+RVA E C G GY IR + + I Y
Sbjct: 254 ERGKGSACRIVCTQPRRISAISVAERVAAERAETCGSGNSTGYQIRLQSRLPRKQGSILY 313
Query: 231 MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
T G++L+ D L++ S I+LDE HER + +DVL K
Sbjct: 314 CTTGIILQWLQSDPHLSSVSHILLDEIHERNLQSDVLMTVIK 355
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 249 (92.7 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 56/145 (38%), Positives = 91/145 (62%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGF----TARGKI 183
++ R+SLP+ K + E++ AV ++ ++I+ G TG GKTTQ+ QY+ + A+ I
Sbjct: 383 VLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNI 442
Query: 184 GCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSS-ETLIKYMTDGMLLRECLV 242
TQPRR++A+SVA+RVA E G +G+ GY++RFE + + T G+LLR+ +
Sbjct: 443 VVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRK--L 500
Query: 243 DLDLNNYSVIMLDEAHERTIHTDVL 267
+ + S +++DE HER I+TD L
Sbjct: 501 ESGIRGISHVIVDEIHERDINTDFL 525
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 31 ILPVYSALPSEMQTRIFEAAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK 90
ILP++S +P + Q ++F+ P G KV+++TNIAETS+TI+ + YV+D K K++ S
Sbjct: 685 ILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSH 744
Query: 91 TGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
M + S+ E +K G + F
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGF 774
Score = 91 (37.1 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 297 ISRVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 336
I +V+++TNIAETS+TI+ + YV+D K K++ S M
Sbjct: 708 IIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNM 747
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 286 (105.7 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 58/148 (39%), Positives = 94/148 (63%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTA---RGKIG 184
++++RQ LP++K++ ++++ +QI+IV G+ +GK++Q+ Q+ AE A G
Sbjct: 65 LMKERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAV 124
Query: 185 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
C+Q A+ +A R A+E +G EVGY + FE C ++ET+++Y TD ML RE +
Sbjct: 125 CSQAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAP 184
Query: 245 DLNNYSVIMLDEAHERTIHTDVLFDPTK 272
LN+Y VI+LD+ HERT+ TDVL K
Sbjct: 185 LLNSYGVIILDDVHERTVPTDVLLGVLK 212
Score = 136 (52.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 51/211 (24%), Positives = 94/211 (44%)
Query: 5 QEEIDTACEILYERMKSLGPDVPELIILPVYSA----LPSEMQTRIFEAAPPGSRKVVIA 60
+++ID A +++ + + PD+ ELI +P+Y +P Q + + RKV++
Sbjct: 292 EQDIDKAYQMIRQEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQ-KCYQKYRRKVLLT 350
Query: 61 TNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQDLPEWKKHVIGGKKSSF 120
T+ + + I I +V+D G ++KVYN + DS+ PIS+ E K ++ S
Sbjct: 351 TSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPS-- 408
Query: 121 GK-----KTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQ-ITQYLAE 174
GK T E + P + L V + + + G ++ + A+
Sbjct: 409 GKLFCLYPEEFTYKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSAK 468
Query: 175 AGFTARGKIGCTQPRRVAAMSVAKRVAEEFG 205
G + GK Q RR ++S +++ FG
Sbjct: 469 HGIRSTGKTH--QTRRQGSISAHSYLSQNFG 497
WARNING: HSPs involving 55 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 350 350 0.0010 116 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 305
No. of states in DFA: 607 (65 KB)
Total size of DFA: 214 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.60u 0.11s 29.71t Elapsed: 00:00:36
Total cpu time: 29.66u 0.11s 29.77t Elapsed: 00:00:36
Start: Thu Aug 15 14:06:43 2013 End: Thu Aug 15 14:07:19 2013
WARNINGS ISSUED: 2