RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9590
(350 letters)
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 94.6 bits (234), Expect = 1e-22
Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 9/128 (7%)
Query: 140 LKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKR 199
++ ++ + ++ I+ G+GKT + + + P RV A + +
Sbjct: 1 IEDDIFR---KKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEA 57
Query: 200 VAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHE 259
+ T + ++ M L + + NY++I++DEAH
Sbjct: 58 LRGLPIRY------QTPAIRAEHTGREIVDLMCHATFTMRLLSPIRVPNYNLIIMDEAHF 111
Query: 260 RTIHTDVL 267
+
Sbjct: 112 TDPASIAA 119
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis
C virus (HCV), different isolates [TaxId: 11103]}
Length = 136
Score = 83.0 bits (204), Expect = 5e-20
Identities = 19/119 (15%), Positives = 36/119 (30%), Gaps = 11/119 (9%)
Query: 150 DNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 209
Q+ + TGSGK+T++ A G+ K+ P A + +++ G
Sbjct: 7 SFQVAHLHAPTGSGKSTKVPAAYAAQGY----KVLVLNPSVAATLGFGAYMSKAHGVDPN 62
Query: 210 QEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
G + + Y +I+ DE H + +
Sbjct: 63 IRTGVRTITTGSPITYSTYGKFL-------ADGGCSGGAYDIIICDECHSTDATSILGI 114
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 299
Score = 76.6 bits (188), Expect = 2e-16
Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 15/103 (14%)
Query: 2 VKGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEAAPPGSRKVVIAT 61
+ + L + G V + + I + ++AT
Sbjct: 43 LPSIRAANVMAASL----RKAGKSV-----VVLNRKTFEREYPTIKQ----KKPDFILAT 89
Query: 62 NIAETSLTIDGIFYVVDPGF-VKQKVYNSKTGMDSLVVTPISQ 103
+IAE + + V+D K + + + IS
Sbjct: 90 DIAEMGANLC-VERVLDCRTAFKPVLVDEGRKVAIKGPLRISA 131
Score = 60.0 bits (145), Expect = 7e-11
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 299 RVVIATNIAETSLTIDGIFYVVDPGF-VKQKVYNSKTGMDSLVVTPISQ 346
++AT+IAE + + V+D K + + + IS
Sbjct: 84 DFILATDIAEMGANLC-VERVLDCRTAFKPVLVDEGRKVAIKGPLRISA 131
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 58.9 bits (141), Expect = 2e-11
Identities = 22/132 (16%), Positives = 37/132 (28%), Gaps = 6/132 (4%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQ 210
++ G+GKT + + R + P RV + +
Sbjct: 7 GMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVKF--- 63
Query: 211 EVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDP 270
+T F S +I M L L + N+ VI++DEAH +
Sbjct: 64 ---HTQAFSAHGSGREVIDAMCHATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIAARGW 120
Query: 271 TKLSKFKKNQRL 282
Sbjct: 121 AAHRARANESAT 132
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 38.9 bits (90), Expect = 9e-04
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 27/95 (28%)
Query: 133 QSLPIY----------KLKHEL---IKAVSD-----------NQILIVIGETGSGKTT-- 166
++L IY + K+E+ + A+++ NQ +I+ GE+G+GKT
Sbjct: 44 KNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEAS 103
Query: 167 -QITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRV 200
+I Q+L + + + +
Sbjct: 104 KKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAF 138
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 38.5 bits (89), Expect = 0.001
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 151 NQILIVIGETGSGKTT---QITQYLAEAGFTARGKIGCTQPRRVAAMSV----AKRVAEE 203
NQ ++ GE+G+GKT ++ YLA+ + K ++ ++ A V E
Sbjct: 121 NQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEA 180
Query: 204 FGC 206
+G
Sbjct: 181 YGN 183
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 237
Score = 37.6 bits (86), Expect = 0.001
Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 7/125 (5%)
Query: 142 HELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGC--TQPRRVAAMSVAKR 199
K + + TG GKT+ + T + A ++
Sbjct: 49 KMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRK 108
Query: 200 VAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLR---ECLVDL--DLNNYSVIML 254
AE+ G +GY E ++ + + ++ + L +L ++ I +
Sbjct: 109 YAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFV 168
Query: 255 DEAHE 259
D+
Sbjct: 169 DDVDA 173
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 37.8 bits (87), Expect = 0.002
Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 40/166 (24%)
Query: 133 QSLPIY----------KLKHEL---IKAVSD-----------NQILIVIGETGSGKTT-- 166
+ LPIY K +HE+ I A++D +Q ++ GE+G+GKT
Sbjct: 49 KQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENT 108
Query: 167 -QITQYLAEAGFTARGKIGCTQPRRVAAMSV--------AKRVAEEFGCRLGQEVGYTIR 217
++ QYLA + +GK + + + A + E FG + + R
Sbjct: 109 KKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSR 168
Query: 218 FEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIH 263
F I + G ++ + L I + ERT H
Sbjct: 169 FGKFIR----INFDVTGYIVGANIETYLLEKSRAIRQAK-DERTFH 209
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 37.4 bits (86), Expect = 0.002
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 151 NQILIVIGETGSGKTT---QITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCR 207
NQ L++ GE+G+GKT ++ QYLA + +++ A + E FG
Sbjct: 125 NQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQ---ANPILEAFGNA 181
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 623
Score = 37.2 bits (85), Expect = 0.003
Identities = 30/176 (17%), Positives = 58/176 (32%), Gaps = 30/176 (17%)
Query: 139 KLKHELIKAV-SDNQILIVIGETGSGKTTQITQ---YLAEAGFTARGKIGCTQPRRVAAM 194
L E +AV + L+++ GSGKT +T YL A I AA
Sbjct: 11 HLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAR 70
Query: 195 SVAKRVAEEFGC-------------------RLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
+ +RV G R +G F ++ L
Sbjct: 71 EMRERVQSLLGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQL-------S 123
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEE 291
+++ L + +++ + + L P + +K + + +Y +Y++
Sbjct: 124 VMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRYYEKVVSDVYQEYQQ 179
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 36.6 bits (84), Expect = 0.005
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 131 QRQSLP--IYKLKHELIKAV---SDNQILIVIGETGSGKTT---QITQYLA 173
+RQ P I+ + + + +NQ +++ GE+G+GKT ++ QY A
Sbjct: 98 KRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFA 148
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 34.6 bits (78), Expect = 0.008
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 10/154 (6%)
Query: 150 DNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVA-----KRVAEEF 204
D+ I +++G +GSGK+ + +A A PRR + + +
Sbjct: 5 DHHIYVLMGVSGSGKSA-VASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPW 63
Query: 205 GCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHT 264
L R + LLRE +L D R
Sbjct: 64 LQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKG-DFDVIESRLKAR 122
Query: 265 DVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRIS 298
F T++ + EP +E + +
Sbjct: 123 KGHFFKTQMLVTQFETLQEPG---ADETDVLVVD 153
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia
coli, RepD [TaxId: 562]}
Length = 306
Score = 35.1 bits (79), Expect = 0.011
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 16/129 (12%)
Query: 139 KLKHELIKAV-SDNQILIVIGETGSGKTTQITQ---YLAEAGFTARGKIGCTQPRRVAAM 194
+L +AV +V+ GSGKT IT +L I AA
Sbjct: 1 RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAR 60
Query: 195 SVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIML 254
+ +RV + G + + + + +++ L + +
Sbjct: 61 EMKERVGQTLGRKEARGLMISTFHTLGL------------DIIKREYAALGMKANFSLFD 108
Query: 255 DEAHERTIH 263
D +
Sbjct: 109 DTDQLALLK 117
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 318
Score = 34.6 bits (78), Expect = 0.013
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Query: 139 KLKHELIKAV-SDNQILIVIGETGSGKTTQITQ---YLAEAGFTARGKIGCTQPRRVAAM 194
L E +AV + L+++ GSGKT +T YL A I AA
Sbjct: 11 HLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAR 70
Query: 195 SVAKRVAEEFGCRLGQEVGYTI 216
+ +RV G T
Sbjct: 71 EMRERVQSLLGGAAEDVWISTF 92
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 34.7 bits (79), Expect = 0.018
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 151 NQILIVIGETGSGKTT---QITQYLA 173
NQ +IV GE+G+GKT +Y A
Sbjct: 94 NQSIIVSGESGAGKTVSAKYAMRYFA 119
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 33.0 bits (75), Expect = 0.029
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 19/129 (14%)
Query: 148 VSDNQILIVIGETGSGKTT-------------QITQYLAEAGFTARGKIG-----CTQPR 189
+ ++ G G GKTT Y +GKI PR
Sbjct: 24 IEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPR 83
Query: 190 RVAAMSVAKRVAEEFGCRLGQ-EVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNN 248
+++ K VA +G ++ + E+ + + + + ++ G + R L L N
Sbjct: 84 KISVEDYLKAVASLYGVKVNKNEIMDALESVEVLDLKKKLGELSQGTIRRVQLASTLLVN 143
Query: 249 YSVIMLDEA 257
+ +LD+
Sbjct: 144 AEIYVLDDP 152
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 32.5 bits (72), Expect = 0.063
Identities = 15/164 (9%), Positives = 42/164 (25%), Gaps = 6/164 (3%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEV 212
++G G+GKT + + + + ++ +A +
Sbjct: 46 ATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRG 105
Query: 213 GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF---- 268
F + + ++L + + I L + ++ +
Sbjct: 106 LSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVG 165
Query: 269 -DPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSL 311
+ L+ + R + I + A+ L
Sbjct: 166 HNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGL 209
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase
PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 31.7 bits (70), Expect = 0.095
Identities = 25/122 (20%), Positives = 40/122 (32%), Gaps = 5/122 (4%)
Query: 143 ELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAE 202
E+I A +++ TG GKT GK+ P + + A+
Sbjct: 15 EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRR 74
Query: 203 EFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL-----DLNNYSVIMLDEA 257
F + V T S+ + + DL L + S+I+ DEA
Sbjct: 75 LFNLPPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEA 134
Query: 258 HE 259
H
Sbjct: 135 HR 136
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 206
Score = 31.0 bits (69), Expect = 0.13
Identities = 20/137 (14%), Positives = 42/137 (30%), Gaps = 20/137 (14%)
Query: 129 VEQRQSLPIYKLKHEL-------IKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARG 181
P + + L ++ ++ ++ TGSGKT
Sbjct: 56 AADPIPTPYFDAEISLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAA--------IN 107
Query: 182 KIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECL 241
++ V +++A++ E G + VG T+ Y + + +
Sbjct: 108 ELSTPTLIVVPTLALAEQWKERLGIFGEEYVGEFSGRIKELKPLTVSTYDSAYVNAEKLG 167
Query: 242 VDLDLNNYSVIMLDEAH 258
L ++ DE H
Sbjct: 168 NRFML-----LIFDEVH 179
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 31.1 bits (69), Expect = 0.15
Identities = 20/146 (13%), Positives = 37/146 (25%), Gaps = 8/146 (5%)
Query: 153 ILIVI-GETGSGKTTQITQYLAEAGFTARGK--IGCTQPRRVAAMSVAKRVAEEFGCRLG 209
LIV+ G +GK+TQ + L EA A G P R + + +
Sbjct: 4 ALIVLEGVDRAGKSTQS-RKLVEA-LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 61
Query: 210 QEVGYTIRFEDCTSSETLIKY---MTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDV 266
+ + + LIK +++ + + +
Sbjct: 62 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 121
Query: 267 LFDPTKLSKFKKNQRLEPLYNKYEEP 292
L + E
Sbjct: 122 PKPDLVLFLQLQLADAAKRGAFGHER 147
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 202
Score = 31.1 bits (69), Expect = 0.15
Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 143 ELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAE 202
E ++ V + L++ T +GKT + GK P R A + +
Sbjct: 32 EAVEKVFSGKNLLLAMPTAAGKTLLA-EMAMVREAIKGGKSLYVVPLRALAGEKYESFKK 90
Query: 203 EFGCRLGQEV--GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHE 259
L + G ++ +I ++ + S +++DE H
Sbjct: 91 WEKIGLRIGISTGDYESRDEHLGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHL 149
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 30.7 bits (68), Expect = 0.18
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 14/39 (35%)
Query: 134 SLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYL 172
SL ++K+ I++G G GK+ Q++
Sbjct: 1 SLALHKV--------------IMVGSGGVGKSALTLQFM 25
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 30.2 bits (67), Expect = 0.21
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVG 213
I+IG+TG GK+ + Q+ + + K++ + GQE
Sbjct: 6 YIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESF 65
Query: 214 YTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHER 260
+I G LL + + N+ L++A +
Sbjct: 66 RSIT--------RSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 104
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 30.1 bits (66), Expect = 0.25
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 151 NQILIVIGETGSGKTTQITQYLAE 174
+I++ IG GSGK+T +++A+
Sbjct: 2 KKIILTIGCPGSGKSTWAREFIAK 25
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 30.4 bits (68), Expect = 0.27
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 148 VSDNQILIVIGETGSGKTT 166
V + +++G TG+GKT
Sbjct: 23 VESGEYFVILGPTGAGKTL 41
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 30.4 bits (68), Expect = 0.28
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ + + ++G +G+GKTT
Sbjct: 28 IENGERFGILGPSGAGKTT 46
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 30.3 bits (68), Expect = 0.30
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 148 VSDNQILIVIGETGSGKTT 166
V D + +I++G +G GKTT
Sbjct: 26 VKDGEFMILLGPSGCGKTT 44
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 29.9 bits (67), Expect = 0.31
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ + + ++ +G +G GK+T
Sbjct: 23 IHEGEFVVFVGPSGCGKST 41
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 30.1 bits (66), Expect = 0.36
Identities = 15/141 (10%), Positives = 28/141 (19%), Gaps = 4/141 (2%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGFTA-RGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 209
I + GE +GKT RG + R G
Sbjct: 23 GSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYG 82
Query: 210 QEVGY---TIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDV 266
+ + +++ + + + L S L
Sbjct: 83 LSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELS 142
Query: 267 LFDPTKLSKFKKNQRLEPLYN 287
+ RL +
Sbjct: 143 ARQMHLARFLRMLLRLADEFG 163
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 29.6 bits (65), Expect = 0.39
Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 3/155 (1%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQ 210
++ I+ G G GK+T + LA + G V ++E +
Sbjct: 2 KKLYIITGPAGVGKST-TCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWK 60
Query: 211 EVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDP 270
+ ++ ++ Y+ + V + + D
Sbjct: 61 NITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDA 120
Query: 271 TKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATN 305
+ + +R L ++E R T+
Sbjct: 121 LRKKDEQMGERCLELVEEFESKGIDE--RYFYNTS 153
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 29.8 bits (67), Expect = 0.40
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 148 VSDNQILIVIGETGSGKTT 166
++ +IG +GSGK+T
Sbjct: 25 ARAGDVISIIGSSGSGKST 43
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 29.5 bits (65), Expect = 0.42
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 148 VSDNQILIVIGETGSGKTTQITQYLAE 174
+ ++I+ V+G GSGK TQ + + +
Sbjct: 5 LKKSKIIFVVGGPGSGKGTQ-CEKIVQ 30
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 29.6 bits (65), Expect = 0.43
Identities = 8/23 (34%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 152 QILIVIGETGSGKTTQITQYLAE 174
++ V+G GSGK TQ +
Sbjct: 7 NVVFVLGGPGSGKGTQ-CANIVR 28
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.5 bits (65), Expect = 0.44
Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 10/116 (8%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVA-KRVAEEFGCRLGQEV 212
I+IG+ G GK+ + Q+ E F A + V+ +++ + GQE
Sbjct: 7 YIIIGDMGVGKSCLLHQFT-EKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 65
Query: 213 GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLF 268
+ G L+ + N+ L +A T V+
Sbjct: 66 FRAVTRSYYRG--------AAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII 113
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 29.2 bits (64), Expect = 0.48
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 151 NQILIVIGETGSGKTTQITQYLAE 174
N++++V G G G TT Q +
Sbjct: 1 NKVVVVTGVPGVGSTTSS-QLAMD 23
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 29.5 bits (66), Expect = 0.49
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 138 YKLKHELIKAVS----DNQILIVIGETGSGKTT 166
Y ++++ +S N I+ G +G GK+T
Sbjct: 11 YDDSEQILRDISFEAQPNSIIAFAGPSGGGKST 43
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 29.2 bits (64), Expect = 0.51
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 126 LTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGC 185
L+I+ + +S P +++ ++++G +GKTT + Q +E G
Sbjct: 3 LSILRKLKSAPDQEVR------------ILLLGLDNAGKTTLLKQLASEDISHITPTQGF 50
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 29.4 bits (66), Expect = 0.52
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ D + L+++G +G GKTT
Sbjct: 29 IKDGEFLVLLGPSGCGKTT 47
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 29.4 bits (65), Expect = 0.53
Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 16/191 (8%)
Query: 135 LPIYKLKHELIKAVSDNQI----LIVIGETGSGKTTQITQYLAEAGFTARGKIGCT---- 186
+P+ ++ + + + ++V+G SGK++ + + + F RG T
Sbjct: 4 IPVINKLQDVFNTLGSDPLDLPQIVVVGSQSSGKSSVL-ENIVGRDFLPRGSGIVTRRPL 62
Query: 187 --QPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL 244
Q + + +E+G L + F D + I TD M + +
Sbjct: 63 ILQLTHLPIADDGSQT-QEWGEFLHKPND---MFYDFSEIREEIIRDTDRMTGKNKGISA 118
Query: 245 DLNNYSVIMLDEAHERTIHT-DVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIA 303
N + + + + P Q++ + Y + I V A
Sbjct: 119 QPINLKIYSPHVVNLTLVDLPGITKVPVGDQPTDIEQQIRRMVMAYIKKQNAIIVAVTPA 178
Query: 304 TNIAETSLTID 314
S +
Sbjct: 179 NTDLANSDALQ 189
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 29.2 bits (64), Expect = 0.56
Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 153 ILIVIGETGSGKTTQITQYLAE 174
++ V+G G+GK TQ + E
Sbjct: 3 VVFVLGGPGAGKGTQ-CARIVE 23
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 29.0 bits (65), Expect = 0.61
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
Query: 138 YKLKHELIKAVSD-------NQILIVIGETGSGKTT 166
YK+ E+I A+ + + + ++G +GSGK+T
Sbjct: 11 YKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKST 46
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 28.7 bits (63), Expect = 0.71
Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 16/156 (10%)
Query: 149 SDNQILIVIGETGSGKTTQITQYLAE--------AGFTARGKIGCTQPRRVAAMSVAKRV 200
+D +++ G SGK TQ + + AG R +I A ++
Sbjct: 1 ADPLKVMISGAPASGKGTQ-CELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKG 59
Query: 201 AEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHER 260
+ V +R D + L+ L L++ + I+LD E
Sbjct: 60 QLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDEL 119
Query: 261 TIHTDVLFDP-----TKLSKFKKNQRLEPLYNKYEE 291
+ V D +L + +N +E L + YE
Sbjct: 120 LVERVVFDDTEEKVKLRLETYYQN--IESLLSTYEN 153
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.8 bits (63), Expect = 0.72
Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 153 ILIVIGETGSGKTTQITQYLAE 174
++ V+G G+GK TQ + L +
Sbjct: 10 VIFVLGGPGAGKGTQ-CEKLVK 30
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 28.9 bits (63), Expect = 0.73
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 153 ILIVI-GETGSGKTTQIT---QYLAEAGFTA 179
+LI I G G+GK T + AG +
Sbjct: 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSV 31
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 28.8 bits (63), Expect = 0.76
Identities = 11/106 (10%), Positives = 31/106 (29%), Gaps = 2/106 (1%)
Query: 152 QILIVIGETGSGKTTQITQYLAEAGFTARGK--IGCTQPRRVAAMSVAKRVAEEFGCRLG 209
+ +V G +G+GKT Q+L + + A+ + +
Sbjct: 27 RSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVD 86
Query: 210 QEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLD 255
+ + + + ++ L+ + + +D
Sbjct: 87 EGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSID 132
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 28.7 bits (64), Expect = 0.79
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ +++ ++G +GSGK+T
Sbjct: 26 IKQGEVIGIVGRSGSGKST 44
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 28.5 bits (62), Expect = 0.82
Identities = 10/64 (15%), Positives = 24/64 (37%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVG 213
L+++GE+ GK++ + +++ + V E GQE
Sbjct: 9 LVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERY 68
Query: 214 YTIR 217
+++
Sbjct: 69 HSLA 72
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 29.1 bits (64), Expect = 0.84
Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 108 WKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQ 167
+K+ + G + S G K E+ + + + + + ++ + L+V G TG+GK+
Sbjct: 11 FKRFLRGTRIVS-GGKLKRMTREKAKQVTVAGVP---MPRDAEPRHLLVNGATGTGKSVL 66
Query: 168 ITQYLAEA 175
+ +
Sbjct: 67 LRELAYTG 74
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 28.5 bits (63), Expect = 0.85
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 152 QILIVIGETGSGKTTQIT---QYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGC 206
++++V+G G GKTT I +Y G R A + +
Sbjct: 7 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVM--FCAGDTFRAAGGTQLSEWGKRLSI 62
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 28.5 bits (63), Expect = 0.94
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 145 IKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IGCTQPRRVAAMSVAKRVA 201
+ + D + ++G GSGKTT + LA + +G+ + +R AA + +
Sbjct: 4 LPVLKDRNLWFLVGLQGSGKTTTAAK-LA-LYYKGKGRRPLLVAADTQRPAAREQLRLLG 61
Query: 202 EEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLR 238
E+ G + + + E + ++L
Sbjct: 62 EKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILV 98
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 28.6 bits (64), Expect = 0.94
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ + + +G +G GK+T
Sbjct: 41 IEKGETVAFVGMSGGGKST 59
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 28.7 bits (64), Expect = 0.96
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ ++L + G TGSGKT+
Sbjct: 59 IEKGEMLAITGSTGSGKTS 77
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 28.4 bits (62), Expect = 0.96
Identities = 6/25 (24%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEA 175
+++I+ G + +GK+ I + L
Sbjct: 3 TRMIILNGGSSAGKSG-IVRCLQSV 26
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 28.7 bits (63), Expect = 0.97
Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
Query: 103 QDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKHELIKAVSDNQILIVIGET-- 160
D+ ++ ++ G +++ + +T+ E R++ ++ + + I +G T
Sbjct: 2 PDMDTLRERLLAGDRAALAR--AITLAESRRADHRAAVRDLIDAVLPQTGRAIRVGITGV 59
Query: 161 -GSGKTT---QITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRV 200
G GK+T + L AG R + +
Sbjct: 60 PGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKT 103
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 28.3 bits (62), Expect = 1.0
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 152 QILIVIGETGSGKTTQITQYLAEAGFT 178
++++ +G G+GK+T I ++L AG+
Sbjct: 15 EVVVAVGFPGAGKSTFIQEHLVSAGYV 41
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 28.3 bits (62), Expect = 1.1
Identities = 7/21 (33%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
++++G G+GK TQ + E
Sbjct: 3 IVLMGLPGAGKGTQ-ADRIVE 22
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 28.7 bits (64), Expect = 1.1
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ + + ++G +GSGK+T
Sbjct: 38 IPAGKTVALVGRSGSGKST 56
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 28.6 bits (62), Expect = 1.1
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEAG 176
I +V+G +GK++ I + E
Sbjct: 29 APITLVLGLRRTGKSSIIKIGINELN 54
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 28.0 bits (61), Expect = 1.1
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 14/40 (35%)
Query: 133 QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYL 172
+S+P +L V+G+ SGK++ I ++L
Sbjct: 1 RSIPELRL--------------GVLGDARSGKSSLIHRFL 26
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/146 (10%), Positives = 30/146 (20%), Gaps = 8/146 (5%)
Query: 121 GKKTNLTIVEQRQSLP-----IYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
G T E+R+ + + L + I GE +GKT A
Sbjct: 2 GFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 61
Query: 176 GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGM 235
G ++ + + + M
Sbjct: 62 ---QLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQM 118
Query: 236 LLRECLVDLDLNNYSVIMLDEAHERT 261
L + + + L
Sbjct: 119 ELLDYVAAKFHEEAGIFKLLIIDSIM 144
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 28.1 bits (61), Expect = 1.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+V+G G GK+ Q++
Sbjct: 9 LVVVGGGGVGKSALTIQFI 27
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 28.3 bits (63), Expect = 1.3
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ ++ ++G GSGK+T
Sbjct: 37 LRPGEVTALVGPNGSGKST 55
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 27.7 bits (60), Expect = 1.4
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVG 213
L+V+G+ G GK+ Q+ + F + + GQE
Sbjct: 7 LVVVGDGGVGKSALTIQFFQKI-FVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 65
Query: 214 YTIRFEDCTSSETLIKYMT 232
+R + + + + +
Sbjct: 66 SAMREQYMRTGDGFLIVYS 84
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.6 bits (60), Expect = 1.5
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+ V G G GK++ + +++
Sbjct: 5 VAVFGAGGVGKSSLVLRFV 23
>d2htja1 a.4.5.73 (A:1-73) P fimbrial regulatory protein PapI
{Escherichia coli [TaxId: 562]}
Length = 73
Score = 26.2 bits (57), Expect = 1.5
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGFTAR---------GKIGCTQPRRVAA 193
N+IL + GKT +I + LA + AR G + + RR A
Sbjct: 3 NEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMA 54
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 1.5
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
+++IG G+GK TQ L E
Sbjct: 5 MVLIGPPGAGKGTQ-APNLQE 24
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 28.0 bits (62), Expect = 1.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
V QI+ +IG G+GKTT
Sbjct: 29 VPRGQIVTLIGANGAGKTT 47
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.7 bits (60), Expect = 1.5
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
++V+G GK++ I +Y
Sbjct: 5 MVVVGNGAVGKSSMIQRYC 23
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 27.6 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 152 QILIVIGETGSGKTTQITQYLAEA 175
IL++ G GSGK+T I + LA
Sbjct: 5 NILLLSGHPGSGKST-IAEALANL 27
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 27.9 bits (62), Expect = 1.6
Identities = 7/34 (20%), Positives = 17/34 (50%)
Query: 133 QSLPIYKLKHELIKAVSDNQILIVIGETGSGKTT 166
+S + ++ ++ K +++ GE+G GK
Sbjct: 5 ESPKMKEILEKIKKISCAECPVLITGESGVGKEV 38
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 27.6 bits (60), Expect = 1.6
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+V+G+ GKT + Y
Sbjct: 12 CVVVGDGAVGKTCLLMSYA 30
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 28.0 bits (62), Expect = 1.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
+ + +I +IG G+GKTT
Sbjct: 25 IEEGEIFGLIGPNGAGKTT 43
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 27.7 bits (60), Expect = 1.6
Identities = 5/19 (26%), Positives = 15/19 (78%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+ ++G+TG GK++ + +++
Sbjct: 7 VCLLGDTGVGKSSIMWRFV 25
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain
(RecB), N-terminal domain {Escherichia coli [TaxId:
562]}
Length = 485
Score = 28.1 bits (61), Expect = 1.6
Identities = 8/66 (12%), Positives = 18/66 (27%), Gaps = 3/66 (4%)
Query: 151 NQILIVIGETGSGKTTQITQ---YLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCR 207
++ G+GKT I L + + ++ + E R
Sbjct: 16 QGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGR 75
Query: 208 LGQEVG 213
+ +
Sbjct: 76 IRSNIH 81
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 28.0 bits (62), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
V +IL ++G G+GK+T
Sbjct: 22 VRAGEILHLVGPNGAGKST 40
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 27.6 bits (60), Expect = 1.7
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
++V+G G GK+ Q++
Sbjct: 6 VVVLGSGGVGKSALTVQFV 24
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 27.4 bits (59), Expect = 1.7
Identities = 4/19 (21%), Positives = 11/19 (57%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+ ++G GK++ Q++
Sbjct: 7 IAILGYRSVGKSSLTIQFV 25
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 27.6 bits (61), Expect = 1.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 148 VSDNQILIVIGETGSGKTT 166
V+ + ++IG GSGK+T
Sbjct: 27 VNKGDVTLIIGPNGSGKST 45
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 27.3 bits (59), Expect = 1.8
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L + G G GK+ + ++L
Sbjct: 5 LAIFGRAGVGKSALVVRFL 23
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 1.8
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+++G+ GKT +
Sbjct: 5 LVIVGDGACGKTCLLIVNS 23
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 27.6 bits (60), Expect = 1.8
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+V+G G GK+ Q++
Sbjct: 6 LVVLGSGGVGKSALTVQFV 24
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 27.7 bits (60), Expect = 1.8
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 153 ILIVIGETGSGKTTQIT---QYLAEAGF 177
I IV G G GK+T + + L G
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGI 30
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 27.6 bits (60), Expect = 1.8
Identities = 7/21 (33%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
L+++G G+GK TQ + +
Sbjct: 3 LVLMGLPGAGKGTQ-AEKIVA 22
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 27.7 bits (60), Expect = 1.8
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+V+G+ GKT + Y
Sbjct: 8 CVVVGDGAVGKTCLLISYT 26
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 27.6 bits (60), Expect = 1.8
Identities = 14/98 (14%), Positives = 26/98 (26%), Gaps = 4/98 (4%)
Query: 153 ILIVIGETGSGKTT---QITQYLAEAGF-TARGKIGCTQPRRVAAMSVAKRVAEEFGCRL 208
+L +G+GKTT ++ L G K + + + +
Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQT 63
Query: 209 GQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDL 246
T E + + +DL L
Sbjct: 64 IVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLIL 101
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.3 bits (59), Expect = 1.8
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+V+G G GK+ Q++
Sbjct: 8 LVVVGGGGVGKSALTIQFI 26
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.3 bits (59), Expect = 1.9
Identities = 8/19 (42%), Positives = 16/19 (84%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+++G+ G+GKTT + ++L
Sbjct: 6 LVLVGDGGTGKTTFVKRHL 24
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 27.2 bits (59), Expect = 1.9
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+ +GE GKT+ IT+++
Sbjct: 3 LVFLGEQSVGKTSLITRFM 21
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 27.3 bits (59), Expect = 1.9
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
++V+G++ GKT + +
Sbjct: 5 IVVVGDSQCGKTALLHVFA 23
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 27.4 bits (59), Expect = 1.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+++IGE G GK+T +
Sbjct: 6 VVLIGEQGVGKSTLANIFA 24
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 27.5 bits (61), Expect = 1.9
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 7/37 (18%)
Query: 137 IYKLKHELIKAVSD-------NQILIVIGETGSGKTT 166
++ I+A+++ QI VIG +G+GK+T
Sbjct: 10 VFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKST 46
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.3 bits (59), Expect = 2.0
Identities = 7/19 (36%), Positives = 16/19 (84%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+I++G++G GKT+ + +Y+
Sbjct: 5 VIILGDSGVGKTSLMHRYV 23
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 27.6 bits (60), Expect = 2.0
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
++++G G+GK TQ LAE
Sbjct: 3 VLLLGPPGAGKGTQ-AVKLAE 22
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 27.9 bits (60), Expect = 2.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 150 DNQILIVIGETGSGKTT 166
I ++IG+ GSGK++
Sbjct: 22 KEGINLIIGQNGSGKSS 38
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 27.2 bits (59), Expect = 2.0
Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
+I++G +GK TQ Q++ E
Sbjct: 3 IILLGAPVAGKGTQ-AQFIME 22
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 27.7 bits (61), Expect = 2.1
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 153 ILIVIGETGSGKTT 166
+++G TG+GK+
Sbjct: 26 YCVLLGPTGAGKSV 39
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 27.8 bits (60), Expect = 2.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 150 DNQILIVIGETGSGKTT 166
I ++IG+ GSGK++
Sbjct: 22 KEGINLIIGQNGSGKSS 38
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 27.3 bits (59), Expect = 2.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+V+G+ GKT + Y
Sbjct: 6 CVVVGDGAVGKTCLLISYT 24
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 27.2 bits (59), Expect = 2.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+VIG G+GK+ + Q++
Sbjct: 8 FLVIGNAGTGKSCLLHQFI 26
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 27.3 bits (59), Expect = 2.3
Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 150 DNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 209
D + + G G+GK+T A TA R + A + + G
Sbjct: 23 DELVTTLSGGNGAGKST-----TMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGK 77
Query: 210 QEVGYT---IRFEDCTSSETLIK 229
+ G + + ++
Sbjct: 78 LKAGVCYSMLDTINSRHQRVVVG 100
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 27.3 bits (59), Expect = 2.3
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+++GE GK++ + +++
Sbjct: 6 LVLLGEAAVGKSSIVLRFV 24
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 27.3 bits (59), Expect = 2.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+V+G G GK+ Q +
Sbjct: 6 LVVVGAGGVGKSALTIQLI 24
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 27.2 bits (59), Expect = 2.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 154 LIVIGETGSGKTTQITQYL 172
++++GE GKT+ + +Y
Sbjct: 6 VVLLGEGCVGKTSLVLRYC 24
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 27.2 bits (59), Expect = 2.3
Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
+++G G+GK TQ LA+
Sbjct: 6 AVLLGPPGAGKGTQ-APKLAK 25
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 27.1 bits (59), Expect = 2.4
Identities = 6/21 (28%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
++G GSGK T + + +
Sbjct: 9 AAIMGAPGSGKGTV-SSRITK 28
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.1 bits (59), Expect = 2.4
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+++IG + GKT+ + +Y
Sbjct: 8 ILIIGNSSVGKTSFLFRYA 26
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.9 bits (58), Expect = 2.5
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+IVIG++ GKT ++
Sbjct: 5 IIVIGDSNVGKTCLTYRFC 23
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 27.3 bits (59), Expect = 2.5
Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 3/131 (2%)
Query: 154 LIVI-GETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEV 212
I I G +GK+T + L + + R S E +
Sbjct: 4 KISIEGNIAAGKSTFV-NILKQL-CEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGN 61
Query: 213 GYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTK 272
+ +E + +R L L+ ER++++D +
Sbjct: 62 VLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASN 121
Query: 273 LSKFKKNQRLE 283
L + + E
Sbjct: 122 LYESECMNETE 132
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.0 bits (58), Expect = 2.7
Identities = 8/19 (42%), Positives = 16/19 (84%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+I++G++G GKT+ + QY+
Sbjct: 5 VIILGDSGVGKTSLMNQYV 23
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 27.5 bits (60), Expect = 2.7
Identities = 13/112 (11%), Positives = 30/112 (26%), Gaps = 5/112 (4%)
Query: 139 KLKHELIKAVSDNQILIVI-GETGSGKTTQITQYLAEAGFTARGKIGC----TQPRRVAA 193
++ +L + + + + G GSGK+ +Q L+++
Sbjct: 31 RVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPK 90
Query: 194 MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLD 245
+ + ++ E TS + L D
Sbjct: 91 STFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFD 142
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 27.2 bits (59), Expect = 2.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+ +G++G GKTT + +Y
Sbjct: 8 LLALGDSGVGKTTFLYRYT 26
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 27.0 bits (58), Expect = 2.8
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 154 LIVIGETGSGKTTQITQY 171
++++G G GK+ +
Sbjct: 4 VLLLGAPGVGKSALARIF 21
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.8 bits (58), Expect = 2.8
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 154 LIVIGETGSGKTTQITQYL 172
++++G++G GKT + ++
Sbjct: 9 VMLVGDSGVGKTCLLVRFK 27
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 27.4 bits (59), Expect = 2.8
Identities = 14/157 (8%), Positives = 35/157 (22%), Gaps = 4/157 (2%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGFTAR-GKIGCTQPRRVAAMSVAKRVAEEFGCRLG 209
I + GE +GK+ G + R G
Sbjct: 34 GSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFG 93
Query: 210 QEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFD 269
+ + + LL + + +S+I++D
Sbjct: 94 LD---PDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRG 150
Query: 270 PTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNI 306
+ + + L ++ + + +
Sbjct: 151 ELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQV 187
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 27.2 bits (59), Expect = 2.9
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 152 QILIVIGETGSGKTTQITQYLAEA 175
I++ G TG+GKT +++++ A
Sbjct: 27 SIILATGATGTGKTLLVSRFVENA 50
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 26.7 bits (58), Expect = 2.9
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 152 QILIVIGETGSGKTTQITQYLAEAGFTARGK 182
+ V+G SGKTT + +++A G
Sbjct: 2 NVWQVVGYKHSGKTTLMEKWVAA--AVREGW 30
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId:
10665]}
Length = 282
Score = 27.2 bits (59), Expect = 2.9
Identities = 14/131 (10%), Positives = 33/131 (25%)
Query: 128 IVEQRQSLPIYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQ 187
I + + + + + + N+ I+ T +G++ GKI
Sbjct: 105 IYSGNKRIEPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENYEGKILIIV 164
Query: 188 PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLN 247
P +A + + + +
Sbjct: 165 PTTALTTQMADDFVDYRLFSHAMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFS 224
Query: 248 NYSVIMLDEAH 258
+ ++M DE H
Sbjct: 225 QFGMMMNDECH 235
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 26.8 bits (58), Expect = 3.0
Identities = 5/19 (26%), Positives = 15/19 (78%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+++IG++G GK+ ++++
Sbjct: 7 VVLIGDSGVGKSNLLSRFT 25
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 27.0 bits (58), Expect = 3.0
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Query: 123 KTNLTIVEQRQSLP-----IYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEA 175
K+ + +++QR ++ +L L + + G GSGKT + Q
Sbjct: 1 KSGIDLLKQRSTVWKLSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNL 58
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 3.1
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQ 187
++++G +GKTT + + T +G
Sbjct: 15 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV 48
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 3.2
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 20/170 (11%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCR-LGQEV 212
+++ G G GKTT + + LA K G ++V EE +E
Sbjct: 7 ILLTGTPGVGKTT-LGKELAS-------KSGLKY------INVGDLAREEQLYDGYDEEY 52
Query: 213 GYTIRFEDCTSSETLIKYMTDGMLLRECLVD-LDLNNYSVIMLDEAHERTIHTDVLFDPT 271
I ED E + G+++ D + ++ + ++ +
Sbjct: 53 DCPILDEDRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGY 112
Query: 272 KLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVD 321
K N + E YEE A +V S + + VD
Sbjct: 113 NEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLP----SNKPEELENNVD 158
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 26.8 bits (58), Expect = 3.3
Identities = 6/19 (31%), Positives = 15/19 (78%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+I++G+ G GK++ + +Y+
Sbjct: 9 VILLGDGGVGKSSLMNRYV 27
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 26.8 bits (58), Expect = 3.5
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Query: 154 LIVI-GETGSGKTTQI---TQYLAEAGF 177
IVI G G+GKTT + L + G
Sbjct: 4 YIVIEGLEGAGKTTARNVVVETLEQLGI 31
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 27.0 bits (58), Expect = 3.5
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 149 SDNQILIVIGETGSGKTT 166
++ +IG GSGK+
Sbjct: 23 GESNFTSIIGPNGSGKSN 40
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.7 bits (58), Expect = 3.5
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+++IG G GKT + ++
Sbjct: 8 IVLIGNAGVGKTCLVRRFT 26
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 26.6 bits (57), Expect = 3.7
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 154 LIVIGETGSGKTTQITQYL 172
++++G G+GKTT + +
Sbjct: 8 ILILGLDGAGKTTILYRLQ 26
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 26.7 bits (58), Expect = 3.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+++IGE+G GK++ + ++
Sbjct: 10 ILIIGESGVGKSSLLLRFT 28
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 26.8 bits (58), Expect = 3.8
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 154 LIVI-GETGSGKTTQITQYLAEAGFTARGKI 183
LI+I G +GKTTQ L + K+
Sbjct: 5 LILIEGLDRTGKTTQC-NILYKK-LQPNCKL 33
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 26.5 bits (57), Expect = 3.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 154 LIVIGETGSGKTTQITQY 171
+I++G +GKTT + Q+
Sbjct: 18 VIIVGLDNAGKTTILYQF 35
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 26.5 bits (57), Expect = 4.0
Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 11/126 (8%)
Query: 152 QILIVIGETGSGKTT---QITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFG--- 205
+ + + G G GKTT + ++ L +G T+ R + V G
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVD--GFYTEEVRQGGRRIGFDVVTLSGTRG 59
Query: 206 --CRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDL-DLNNYSVIMLDEAHERTI 262
R+G E R + L D V ++DE + +
Sbjct: 60 PLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMEL 119
Query: 263 HTDVLF 268
+ +
Sbjct: 120 FSQLFI 125
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 26.2 bits (56), Expect = 4.1
Identities = 24/154 (15%), Positives = 44/154 (28%), Gaps = 7/154 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVG 213
+ ++G G+GK+T I + LA+ + + V E ++
Sbjct: 5 IFLVGPMGAGKST-IGRQLAQQ-LNMEFYDSDQEIEKRTGADVGWVFDLEGEEG-FRDRE 61
Query: 214 YTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKL 273
+ E ++ + RE L V + D +
Sbjct: 62 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLE--TTIEKQLARTQRDKKRP 119
Query: 274 SKFKKNQRLEPLYNKYEE--PNAWRISRVVIATN 305
+ E L E P I+ V I T+
Sbjct: 120 LLHVETPPREVLEALANERNPLYEEIADVTIRTD 153
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 26.2 bits (56), Expect = 4.2
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 154 LIVIGETGSGKTTQITQYL 172
++++G +GKTT + +
Sbjct: 3 ILMVGLDAAGKTTILYKLK 21
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 26.9 bits (58), Expect = 4.2
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 150 DNQILIVIGETGSGKTT 166
+++ ++G GSGK+
Sbjct: 23 SDRVTAIVGPNGSGKSN 39
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 26.3 bits (57), Expect = 4.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L++IG++G GKT + ++
Sbjct: 9 LLLIGDSGVGKTCVLFRFS 27
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 26.6 bits (57), Expect = 4.3
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 137 IYKLKHELIKAVSDNQILIVI-GETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMS 195
I L ++ + ++++ I G + SGKTT + L++ +G C +
Sbjct: 7 IDFLCKTILAIKTAGRLVLGIDGLSRSGKTT-LANQLSQT-LREQGISVCVFHMDDHIVE 64
Query: 196 VAKRVAEEFGCR 207
AKR
Sbjct: 65 RAKRYHTGNEEW 76
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 26.2 bits (56), Expect = 4.4
Identities = 15/146 (10%), Positives = 37/146 (25%), Gaps = 5/146 (3%)
Query: 153 ILIVIGETGSGKTT---QITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVA--EEFGCR 207
+ + G SGK + L + G + + R + + R
Sbjct: 8 TIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQR 67
Query: 208 LGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVL 267
+ R + + Y R+ + + H +
Sbjct: 68 IAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAGSFFLVHVATPLEHCEQSDKRGI 127
Query: 268 FDPTKLSKFKKNQRLEPLYNKYEEPN 293
+ + + K ++ Y E+ +
Sbjct: 128 YAAARRGEIKGFTGVDDPYETPEKAD 153
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 26.4 bits (57), Expect = 4.6
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 153 ILIVIGETGSGKTTQITQYLAEAGFT 178
I+ + G GSGKTT I + G
Sbjct: 4 IVGLTGGIGSGKTT-IANLFTDLGVP 28
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 26.4 bits (57), Expect = 4.8
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Query: 155 IVIGETG---SGKTTQITQYLAEAGF 177
I+IG TG SGK+T + L G+
Sbjct: 4 IIIGITGNIGSGKST-VAALLRSWGY 28
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 26.2 bits (56), Expect = 4.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
L+++G +GKTT + ++ E
Sbjct: 5 LLMLGLDNAGKTTILKKFNGE 25
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.4 bits (57), Expect = 5.0
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L++IG +G GK+ + ++
Sbjct: 9 LLLIGNSGVGKSCLLLRFS 27
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 26.4 bits (57), Expect = 5.0
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCT 186
+ V+G +GK++ + + F RG T
Sbjct: 29 IAVVGGQSAGKSSVL-ENFVGRDFLPRGSGIVT 60
>d1naqa_ d.58.5.2 (A:) Cut A1 {Escherichia coli [TaxId: 562]}
Length = 106
Score = 25.5 bits (56), Expect = 5.1
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 15 LYERMKSLGP-DVPELIILPVYSALP 39
L E +KS P PEL++LPV
Sbjct: 70 LLECLKSHHPYQTPELLVLPVTHGDT 95
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.1 bits (56), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 154 LIVIGETGSGKTTQITQY 171
L+++G SGK+T I Q
Sbjct: 5 LLLLGTGESGKSTFIKQM 22
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 26.5 bits (57), Expect = 5.3
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 150 DNQILIVIGETGSGKTT 166
++G GSGK+
Sbjct: 25 SKGFTAIVGANGSGKSN 41
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.3 bits (57), Expect = 5.4
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 6/104 (5%)
Query: 152 QILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQE 211
+ IV +G+GK++ + Q L + ++ + R + E + E
Sbjct: 3 TLYIVSAPSGAGKSS-LIQALLKTQPLYDTQVSVSHTTR--QPRPGEVHGEHYFFVNHDE 59
Query: 212 VGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLD 255
I + + + ++ L + LD
Sbjct: 60 FKEMISRDAFLEHA---EVFGNYYGTSREAIEQVLATGVDVFLD 100
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 26.4 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 153 ILIVIGETGSGKTTQITQYLAE 174
+ ++ G G+GKTT + L E
Sbjct: 5 VTLLTGFLGAGKTTLLRHILNE 26
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 26.1 bits (56), Expect = 5.7
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 154 LIVIGETGSGKTTQITQYLAEA 175
+++G GSGK+T I + LA+A
Sbjct: 4 AVLVGLPGSGKST-IGRRLAKA 24
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 26.1 bits (56), Expect = 5.8
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 153 ILIVI-GETGSGKTTQITQYLAEAG 176
++I G GSGKTT + + +
Sbjct: 10 FTVLIEGNIGSGKTTYL-NHFEKYK 33
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 26.2 bits (56), Expect = 5.9
Identities = 6/20 (30%), Positives = 10/20 (50%), Gaps = 1/20 (5%)
Query: 155 IVIGETGSGKTTQITQYLAE 174
++G SGK+ + LA
Sbjct: 11 AILGGESSGKSVLV-NKLAA 29
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 26.1 bits (56), Expect = 5.9
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 131 QRQSLP-IYKLKHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK 182
QR +P + L ++ A +++ +++++G+ G GKTT + +A G
Sbjct: 1 QRPDIPSLSALVDDI--ARNEHGLIMLMGKGGVGKTT-MAAAIAVR-LADMGF 49
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 26.0 bits (56), Expect = 6.2
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 153 ILIVIGETGSGKTTQITQYLAEAGF 177
I+ + G GSGK+T + A+ G
Sbjct: 5 IVALTGGIGSGKST-VANAFADLGI 28
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 26.2 bits (56), Expect = 6.3
Identities = 16/105 (15%), Positives = 28/105 (26%), Gaps = 1/105 (0%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEAGFTAR-GKIGCTQPRRVAAMSVAKRVAEEFGCRLG 209
I V GE GSGKT G + + + E G
Sbjct: 36 QAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREIAQNRG 95
Query: 210 QEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIML 254
+ ++ + M + + +L + V +L
Sbjct: 96 LDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDRPVKLL 140
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 25.7 bits (55), Expect = 6.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 154 LIVIGETGSGKTT 166
+I+ GE G GKTT
Sbjct: 3 IIITGEPGVGKTT 15
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 25.8 bits (55), Expect = 6.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L ++G SGKTT +
Sbjct: 5 LTLVGLQYSGKTTFVNVIA 23
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 25.9 bits (56), Expect = 6.4
Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Query: 141 KHELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGK---IGCTQPRRVAAMSVA 197
K + +++++G G+GK T + LA + +G + R AA+
Sbjct: 2 KEPKVIPDKIPYVIMLVGVQGTGKATTAGK-LA-YFYKKKGFKVGLVGADVYRPAALEQL 59
Query: 198 KRVAEEFGCRLGQEVGYTIRFEDC 221
+++ ++ G + E G
Sbjct: 60 QQLGQQIGVPVYGEPGEKDVVGIA 83
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 25.9 bits (56), Expect = 6.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 154 LIVIGETGSGKTTQITQY 171
L+++G SGK+T + Q
Sbjct: 9 LLLLGAGESGKSTIVKQM 26
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 25.9 bits (55), Expect = 6.5
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 139 KLKHELIKAVSDNQI---LIVIGETGSGKTTQITQYL 172
+L + L + L++ G G+GK T+ L
Sbjct: 18 ELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALL 54
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 26.3 bits (56), Expect = 6.6
Identities = 13/114 (11%), Positives = 24/114 (21%), Gaps = 11/114 (9%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEA---GFTARGKIGCTQPRRVAAMSVAKRVAEEFGCR 207
N I IG G GKTT + ++ + G + +
Sbjct: 46 NMIYGSIGRVGIGKTT-LAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQ 104
Query: 208 LGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERT 261
G + + + L L + +
Sbjct: 105 TGYPIQVRGAPALDILKALVDNLYVENHYLLVIL-------DEFQSMLSSPRIA 151
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 25.7 bits (55), Expect = 6.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 154 LIVIGETGSGKTTQITQY 171
L+++G SGK+T + Q
Sbjct: 5 LLLLGAGESGKSTIVKQM 22
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 25.5 bits (55), Expect = 6.7
Identities = 5/19 (26%), Positives = 15/19 (78%)
Query: 154 LIVIGETGSGKTTQITQYL 172
+++IG++G GK+ + +++
Sbjct: 5 ILLIGDSGVGKSCLLVRFV 23
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 26.3 bits (57), Expect = 6.9
Identities = 29/182 (15%), Positives = 49/182 (26%), Gaps = 16/182 (8%)
Query: 143 ELIKAVSDNQILI-VIGETGSGKTTQIT----QYLAEAGFTARGKIGCTQPRRVAAMSVA 197
+ +K + + + + V GETGSGK++ I E G G + T R
Sbjct: 47 DALKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNI 106
Query: 198 KRVAEEFGCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEA 257
V G + L K + + +
Sbjct: 107 PNV------VFWDLPGI--GSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAI 158
Query: 258 HERTIHTDVLFDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIF 317
+ F TK+ N+ +E I R+ E + IF
Sbjct: 159 SMM--KKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDI-RLNCVNTFRENGIAEPPIF 215
Query: 318 YV 319
+
Sbjct: 216 LL 217
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 25.7 bits (55), Expect = 7.0
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 151 NQILIVIGETGSGKTTQITQYLAEA 175
+ + ++G G G TT + + LA A
Sbjct: 2 TEPIFMVGARGCGMTT-VGRELARA 25
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 26.1 bits (56), Expect = 7.0
Identities = 10/65 (15%), Positives = 22/65 (33%)
Query: 143 ELIKAVSDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAE 202
+ ++++V +G GK+T + Q + G K+G + +
Sbjct: 27 DKTLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLIGL 86
Query: 203 EFGCR 207
R
Sbjct: 87 HNRVR 91
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 25.8 bits (55), Expect = 7.5
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 154 LIVIGETGSGKTTQITQY 171
L+ +G +GKTT +
Sbjct: 16 LVFLGLDNAGKTTLLHML 33
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 25.4 bits (54), Expect = 7.5
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 154 LIVIGETGSGKTTQITQYL 172
L+ +G +GKTT +
Sbjct: 3 LLFLGLDNAGKTTLLHMLK 21
>d1nzaa_ d.58.5.2 (A:) Cut A1 {Thermus thermophilus [TaxId: 274]}
Length = 103
Score = 24.7 bits (54), Expect = 7.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 15 LYERMKSLGP-DVPELIILPVYSALPS 40
L ER+K+L P VPE++ LP+
Sbjct: 67 LKERVKALHPYTVPEIVALPIAEGNRE 93
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.6 bits (55), Expect = 7.7
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 154 LIVIGETGSGKTTQITQY 171
++++G SGK+T + Q
Sbjct: 5 ILLLGAGESGKSTFLKQM 22
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 25.4 bits (54), Expect = 8.1
Identities = 16/168 (9%), Positives = 51/168 (30%), Gaps = 11/168 (6%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVG 213
+++ G G+GKT+ + +A + + + + ++
Sbjct: 8 ILITGTPGTGKTSM-AEMIAAE-LDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDED 65
Query: 214 YTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHTDVLFDPTKL 273
+ F E ++ + ++ + ++++ + +
Sbjct: 66 RLLDFM-----EPIMVSRGNHVVDYHSSELFPERWFHMVVVLHTSTEVLFERLTKRQYSE 120
Query: 274 SKFKKNQRLEPLYNKYEEPNAWRISRVVIATNIAETSLTIDGIFYVVD 321
+K +N E EE +V+ + T++ + V+
Sbjct: 121 AKRAENMEAEIQCICEEEARDAYEDDIVLVRE----NDTLEQMAATVE 164
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 25.7 bits (55), Expect = 8.2
Identities = 6/23 (26%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 152 QILIVIGETGSGKTTQITQYLAE 174
+++++ G + GK+T + + L E
Sbjct: 3 RVVVLSGPSAVGKST-VVRCLRE 24
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 25.3 bits (54), Expect = 8.6
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 154 LIVIGETGSGKTTQITQY 171
++++G G+GKTT + +
Sbjct: 20 ILILGLDGAGKTTILYRL 37
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 25.8 bits (55), Expect = 9.2
Identities = 6/22 (27%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Query: 154 LIVI-GETGSGKTTQITQYLAE 174
+ I G GK+T + + L +
Sbjct: 4 RLSIEGNIAVGKSTFV-KLLTK 24
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 25.3 bits (54), Expect = 9.6
Identities = 21/145 (14%), Positives = 45/145 (31%), Gaps = 19/145 (13%)
Query: 154 LIVIGETGSGKTTQITQYLAEAGFTARGKIGC---------TQPRRVAAMSVAKRVAEEF 204
++ IG GSGK+T + + LA+ + Q + ++ E F
Sbjct: 3 IVFIGFMGSGKST-LARALAK-------DLDLVFLDSDFLIEQKFNQKVSEIFEQKRENF 54
Query: 205 GCRLGQEVGYTIRFEDCTSSETLIKYMTDGMLLRECLVDLDLNNYSVIMLDEAHERTIHT 264
Q++ + T ++ L + ++ + +
Sbjct: 55 FREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDEISKR 114
Query: 265 DVLFDPTKLSKFKKNQRLEPLYNKY 289
+ +D K K N+R Y +
Sbjct: 115 PLFYDEIKAKKL-YNER-LSKYEQK 137
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 25.7 bits (56), Expect = 9.7
Identities = 7/25 (28%), Positives = 10/25 (40%), Gaps = 2/25 (8%)
Query: 151 NQILIVI-GETGSGKTTQITQYLAE 174
+ I + G G GKTT +
Sbjct: 4 GVLRIYLDGAYGIGKTTAA-EEFLH 27
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 25.3 bits (54), Expect = 9.8
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 154 LIVIGETGSGKTTQITQYLAE 174
+++ G +G+GK+T + + E
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQE 23
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 25.3 bits (54), Expect = 9.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 153 ILIVIGETGSGKTT 166
I++ +G GSGKTT
Sbjct: 2 IVVFVGTAGSGKTT 15
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.385
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,283,709
Number of extensions: 60368
Number of successful extensions: 415
Number of sequences better than 10.0: 1
Number of HSP's gapped: 409
Number of HSP's successfully gapped: 193
Length of query: 350
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 264
Effective length of database: 1,226,816
Effective search space: 323879424
Effective search space used: 323879424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.9 bits)