Query psy9595
Match_columns 232
No_of_seqs 153 out of 450
Neff 4.6
Searched_HMMs 13730
Date Fri Aug 16 23:44:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9595.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9595hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g94a2 c.1.8.1 (A:1-354) Bact 16.5 31 0.0023 27.4 2.2 18 40-57 23-40 (354)
2 d1jaea2 c.1.8.1 (A:1-378) Anim 16.1 22 0.0016 28.6 1.2 18 40-57 31-48 (378)
3 d1n0ua4 d.58.11.1 (A:482-560) 12.0 25 0.0018 23.4 0.3 17 215-231 56-73 (79)
4 d1m6ex_ c.66.1.35 (X:) Salicyl 11.3 32 0.0023 29.3 0.8 19 70-88 249-267 (359)
5 d1hx0a2 c.1.8.1 (A:1-403) Anim 10.3 59 0.0043 26.1 2.2 19 39-57 30-48 (403)
6 d2bv3a4 d.58.11.1 (A:404-478) 9.6 17 0.0012 24.1 -1.3 18 215-232 55-72 (75)
7 d2dy1a4 d.58.11.1 (A:378-454) 8.5 38 0.0028 22.2 0.2 16 215-231 55-70 (77)
8 d1xwna1 b.62.1.1 (A:1-166) Pep 7.6 81 0.0059 22.9 1.8 44 106-168 3-47 (166)
9 d3cmna1 d.92.1.16 (A:43-391) U 7.5 91 0.0066 26.0 2.2 21 73-93 326-346 (346)
10 d2qalf1 d.58.14.1 (F:1-100) Ri 6.7 1.8E+02 0.013 19.3 3.2 75 73-167 7-81 (100)
No 1
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=16.52 E-value=31 Score=27.37 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=15.5
Q ss_pred hhhhhhhcCccccccccc
Q psy9595 40 VVKEKAESGVQEEGEVKS 57 (232)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~ 57 (232)
.+.+.|.++|++.|..+.
T Consensus 23 yl~~lG~tai~l~P~~~~ 40 (354)
T d1g94a2 23 YLGPKGYAAVQVSPPNEH 40 (354)
T ss_dssp THHHHTCCEEEECCCSCB
T ss_pred HHHHcCCCEEEeCcCccC
Confidence 578899999999998874
No 2
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]}
Probab=16.06 E-value=22 Score=28.60 Aligned_cols=18 Identities=17% Similarity=0.124 Sum_probs=15.2
Q ss_pred hhhhhhhcCccccccccc
Q psy9595 40 VVKEKAESGVQEEGEVKS 57 (232)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~ 57 (232)
.+.+.+.++|++.|..+.
T Consensus 31 yl~~lG~tai~l~P~~e~ 48 (378)
T d1jaea2 31 FLQPQGFGGVQISPPNEY 48 (378)
T ss_dssp TTTTTTEEEEECCCCSCB
T ss_pred HHHHhCCCEEEeCccccc
Confidence 578899999999998774
No 3
>d1n0ua4 d.58.11.1 (A:482-560) Elongation factor 2 (eEF-2) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.95 E-value=25 Score=23.37 Aligned_cols=17 Identities=29% Similarity=0.552 Sum_probs=14.4
Q ss_pred CcchHHHHHHhhc-CCcC
Q psy9595 215 HLGTILDYVNEDY-GISI 231 (232)
Q Consensus 215 ~L~slL~~l~~~~-Gi~i 231 (232)
||..+++.|.++| ||.|
T Consensus 56 HLev~~~rL~~~f~~vev 73 (79)
T d1n0ua4 56 HLEICLQDLEHDHAGVPL 73 (79)
T ss_dssp HHHHHHHHHHHTTSCSCE
T ss_pred HHHHHHHHHHHHhCCceE
Confidence 4678999999998 8876
No 4
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}
Probab=11.31 E-value=32 Score=29.30 Aligned_cols=19 Identities=21% Similarity=0.207 Sum_probs=15.6
Q ss_pred CCCCCeeccChHhhhCHHH
Q psy9595 70 KHEIMVFRPTYEEFKDFSK 88 (232)
Q Consensus 70 ~~~~PvF~PT~eEF~df~~ 88 (232)
.-.+|+|+||.|||+.++.
T Consensus 249 sfn~P~Y~ps~eEv~~~ie 267 (359)
T d1m6ex_ 249 KFNIPQYTPSPTEVEAEIL 267 (359)
T ss_dssp GGCCCCBCCCSHHHHHHHH
T ss_pred hccCccccCCHHHHHHHhc
Confidence 4569999999999987654
No 5
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=10.32 E-value=59 Score=26.06 Aligned_cols=19 Identities=21% Similarity=0.191 Sum_probs=14.8
Q ss_pred hhhhhhhhcCccccccccc
Q psy9595 39 KVVKEKAESGVQEEGEVKS 57 (232)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~ 57 (232)
..+.+-+.++|++.|..+.
T Consensus 30 ~yL~~lG~taIwl~P~~e~ 48 (403)
T d1hx0a2 30 RYLGPKGFGGVQVSPPNEN 48 (403)
T ss_dssp HTTTTTTCCEEEECCCSCB
T ss_pred HHHHHhCCCEEEeCcCccC
Confidence 3467788999999888763
No 6
>d2bv3a4 d.58.11.1 (A:404-478) Elongation factor G (EF-G) {Thermus thermophilus [TaxId: 274]}
Probab=9.64 E-value=17 Score=24.15 Aligned_cols=18 Identities=17% Similarity=0.479 Sum_probs=4.2
Q ss_pred CcchHHHHHHhhcCCcCC
Q psy9595 215 HLGTILDYVNEDYGISID 232 (232)
Q Consensus 215 ~L~slL~~l~~~~Gi~i~ 232 (232)
||..+++.|.++|||.|+
T Consensus 55 HLev~~~rL~~~~~vev~ 72 (75)
T d2bv3a4 55 SLEIIVDRLKREFKVDAN 72 (75)
T ss_dssp HHTTCC------------
T ss_pred HHHHHHHHHHHHHCCceE
Confidence 356788888889888763
No 7
>d2dy1a4 d.58.11.1 (A:378-454) Elongation factor G (EF-G) {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=8.50 E-value=38 Score=22.18 Aligned_cols=16 Identities=38% Similarity=0.833 Sum_probs=12.7
Q ss_pred CcchHHHHHHhhcCCcC
Q psy9595 215 HLGTILDYVNEDYGISI 231 (232)
Q Consensus 215 ~L~slL~~l~~~~Gi~i 231 (232)
||..+++.| +++||.|
T Consensus 55 HLei~~~rL-~~~~v~v 70 (77)
T d2dy1a4 55 HLATAKERL-QDYGVEV 70 (77)
T ss_dssp HHHHHHHHH-HHTTCCE
T ss_pred hHHHHHHHH-HHcCCcE
Confidence 467899999 5799876
No 8
>d1xwna1 b.62.1.1 (A:1-166) Peptidyl-prolyl cis-trans isomerase-like 1, PPIL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.57 E-value=81 Score=22.89 Aligned_cols=44 Identities=20% Similarity=0.416 Sum_probs=27.7
Q ss_pred ecCCCCCCCCCCCCccccccCcccccCCcceeeecCCceEEEEeec-CCCCCHHHHHHHhcCCC
Q psy9595 106 VIPPPEWVPRKSGYSLDSSIGDMSIPAPICQVVTGKQGLYQQINIQ-KRQMTVREYGAMANKPR 168 (232)
Q Consensus 106 IIPP~~W~p~~~~~~~~~~l~~~~I~~PI~Q~v~G~~Gvy~q~nie-kk~yT~~eFk~lA~~~~ 168 (232)
++||..|+++.- -++. +.|...+.... .-+.|+..|.+||....
T Consensus 3 ~~p~~~~~~p~v--~~~T-----------------~~G~i~ieL~~~~aP~tv~nF~~L~~~g~ 47 (166)
T d1xwna1 3 AIPPDSWQPPNV--YLET-----------------SMGIIVLELYWKHAPKTCKNFAELARRGY 47 (166)
T ss_dssp CCSSCCCCCCEE--EEEE-----------------SSCEEEEEECTTTCHHHHHHHHHHHHHTS
T ss_pred CCCCCCCCCCEE--EEEE-----------------CceeEEEEEcCCCChHHHHHHHHHHhcCC
Confidence 689999987531 1111 12555444443 46799999999997543
No 9
>d3cmna1 d.92.1.16 (A:43-391) Uncharacterized protein Caur0242 {Chloroflexus aurantiacus [TaxId: 1108]}
Probab=7.51 E-value=91 Score=26.01 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=17.6
Q ss_pred CCeeccChHhhhCHHHHHHHH
Q psy9595 73 IMVFRPTYEEFKDFSKFITYM 93 (232)
Q Consensus 73 ~PvF~PT~eEF~df~~Yi~~i 93 (232)
-|-+=||.+|..||..||..|
T Consensus 326 ~pd~LPt~~El~dP~~wiaRv 346 (346)
T d3cmna1 326 RPENLPSMDEIRNPGQWIVRM 346 (346)
T ss_dssp CGGGSCCHHHHHCHHHHHHHH
T ss_pred CCccCcCHHHHhCHHHHHhhC
Confidence 355679999999999999865
No 10
>d2qalf1 d.58.14.1 (F:1-100) Ribosomal protein S6 {Escherichia coli [TaxId: 562]}
Probab=6.73 E-value=1.8e+02 Score=19.32 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=45.9
Q ss_pred CCeeccChHhhhCHHHHHHHHHhhccccCCceeecCCCCCCCCCCCCccccccCcccccCCcceeeecCCceEEEEeecC
Q psy9595 73 IMVFRPTYEEFKDFSKFITYMESQGAHKAGLAKVIPPPEWVPRKSGYSLDSSIGDMSIPAPICQVVTGKQGLYQQINIQK 152 (232)
Q Consensus 73 ~PvF~PT~eEF~df~~Yi~~i~~~ga~~~GI~KIIPP~~W~p~~~~~~~~~~l~~~~I~~PI~Q~v~G~~Gvy~q~niek 152 (232)
+-+++|+.+| +-...++.+...-. +.|- +|+-=..|--|.--| ||..+ ..|.|.+++++.
T Consensus 7 ~~Il~p~~~e--~~~~~~~~~~~~i~-~~gg-~v~~~~~~G~r~LAY-------------~I~k~---~~G~Y~~~~f~~ 66 (100)
T d2qalf1 7 VFMVHPDQSE--QVPGMIERYTAAIT-GAEG-KIHRLEDWGRRQLAY-------------PINKL---HKAHYVLMNVEA 66 (100)
T ss_dssp EEEECGGGTT--HHHHHHHHHHHHHH-HTTC-CCCCCCCCBSCBCSS-------------CTTSC---SBCBBCCCCEEC
T ss_pred EEEECCCcHH--HHHHHHHHHHHHHH-hCCC-EEEEEeeeeeeeccc-------------ccccC---CeeEEEEEEEec
Confidence 3467888765 35566665555443 3333 565555564443223 33322 258998888888
Q ss_pred CCCCHHHHHHHhcCC
Q psy9595 153 RQMTVREYGAMANKP 167 (232)
Q Consensus 153 k~yT~~eFk~lA~~~ 167 (232)
.+-.+.+++....-.
T Consensus 67 ~~~~i~el~~~l~~~ 81 (100)
T d2qalf1 67 PQEVIDELETTFRFN 81 (100)
T ss_dssp CHHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHhcCc
Confidence 888888988877543
Done!