Query psy9598
Match_columns 1915
No_of_seqs 1801 out of 7675
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 23:51:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9598.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9598hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0644|consensus 100.0 4E-121 8E-126 1091.9 39.1 1002 304-1471 13-1111(1113)
2 KOG0271|consensus 100.0 8.8E-47 1.9E-51 421.7 29.6 333 470-842 109-479 (480)
3 KOG0271|consensus 100.0 1.3E-41 2.9E-46 380.3 30.7 311 444-793 127-479 (480)
4 KOG0272|consensus 100.0 2.4E-39 5.2E-44 368.1 24.0 286 471-793 170-458 (459)
5 KOG0273|consensus 100.0 1E-37 2.2E-42 358.6 34.1 327 471-844 173-523 (524)
6 KOG0286|consensus 100.0 1.5E-36 3.2E-41 331.0 34.3 292 466-793 45-343 (343)
7 KOG0291|consensus 100.0 1E-35 2.2E-40 357.3 44.6 409 445-883 108-616 (893)
8 KOG0272|consensus 100.0 2.1E-37 4.6E-42 352.3 25.3 286 516-842 173-458 (459)
9 KOG0319|consensus 100.0 1.5E-36 3.2E-41 365.5 33.5 387 446-854 76-587 (775)
10 KOG0319|consensus 100.0 8.3E-34 1.8E-38 341.9 33.7 378 473-885 59-583 (775)
11 KOG0318|consensus 100.0 2.4E-32 5.2E-37 317.7 44.2 422 467-910 50-548 (603)
12 KOG0279|consensus 100.0 1.9E-33 4.2E-38 305.5 32.5 293 465-795 4-313 (315)
13 KOG0318|consensus 100.0 4.2E-32 9E-37 315.7 44.5 403 445-878 161-601 (603)
14 KOG0306|consensus 100.0 7.9E-33 1.7E-37 332.4 38.6 408 448-877 81-662 (888)
15 KOG0315|consensus 100.0 1.4E-32 3.1E-37 293.4 32.4 296 488-822 10-308 (311)
16 KOG0291|consensus 100.0 1.8E-31 3.8E-36 321.0 44.7 378 476-881 96-552 (893)
17 KOG0286|consensus 100.0 2.9E-32 6.4E-37 297.5 33.8 293 511-842 48-343 (343)
18 KOG0295|consensus 100.0 2.4E-33 5.1E-38 314.2 23.6 301 457-794 89-405 (406)
19 KOG0285|consensus 100.0 7.2E-33 1.6E-37 308.0 27.1 302 462-846 137-441 (460)
20 KOG0265|consensus 100.0 1.2E-32 2.7E-37 301.9 28.5 290 471-793 42-336 (338)
21 KOG0279|consensus 100.0 8.1E-32 1.8E-36 293.0 33.7 294 509-844 6-313 (315)
22 KOG0296|consensus 100.0 1.4E-31 3.1E-36 300.4 34.7 340 470-844 58-398 (399)
23 KOG0293|consensus 100.0 1.5E-32 3.2E-37 310.5 24.7 293 467-796 215-514 (519)
24 KOG0645|consensus 100.0 3.6E-31 7.9E-36 286.6 33.8 294 466-795 4-311 (312)
25 KOG0315|consensus 100.0 1E-30 2.3E-35 279.3 29.6 283 530-854 10-298 (311)
26 KOG0282|consensus 100.0 6.7E-32 1.5E-36 312.6 20.7 299 465-793 203-503 (503)
27 KOG0306|consensus 100.0 7.2E-30 1.6E-34 307.1 37.1 400 445-883 34-584 (888)
28 KOG0281|consensus 100.0 4E-32 8.6E-37 300.1 16.3 277 475-799 196-481 (499)
29 KOG0263|consensus 100.0 1.1E-30 2.4E-35 319.7 30.0 247 471-753 373-650 (707)
30 KOG0273|consensus 100.0 3.1E-30 6.7E-35 297.2 31.4 310 446-795 193-523 (524)
31 KOG0296|consensus 100.0 4.4E-30 9.4E-35 288.5 31.4 309 447-795 79-398 (399)
32 KOG0284|consensus 100.0 1.6E-31 3.4E-36 303.0 19.4 285 518-844 96-380 (464)
33 cd00200 WD40 WD40 domain, foun 100.0 2.4E-29 5.3E-34 298.2 36.9 287 470-793 3-289 (289)
34 KOG0284|consensus 100.0 2.7E-31 5.8E-36 301.1 18.8 283 476-795 96-380 (464)
35 KOG0276|consensus 100.0 2.2E-29 4.8E-34 296.9 34.8 288 468-791 5-295 (794)
36 KOG0292|consensus 100.0 1.6E-29 3.4E-34 307.1 34.0 340 472-845 5-398 (1202)
37 KOG0295|consensus 100.0 2.6E-30 5.5E-35 289.9 25.0 291 509-842 99-404 (406)
38 KOG0645|consensus 100.0 5.4E-29 1.2E-33 269.9 32.3 300 509-844 5-311 (312)
39 KOG0263|consensus 100.0 5.4E-30 1.2E-34 313.7 27.8 252 511-799 371-653 (707)
40 KOG0266|consensus 100.0 1.9E-29 4.2E-34 320.9 33.4 295 469-795 151-454 (456)
41 PLN00181 protein SPA1-RELATED; 100.0 2.8E-28 6.1E-33 332.9 41.1 291 472-794 479-792 (793)
42 KOG0281|consensus 100.0 2.2E-30 4.8E-35 286.4 15.8 283 518-848 197-481 (499)
43 KOG0316|consensus 100.0 9.1E-29 2E-33 262.2 27.1 282 469-838 10-294 (307)
44 cd00200 WD40 WD40 domain, foun 100.0 4.4E-28 9.4E-33 287.5 35.9 288 511-842 2-289 (289)
45 KOG0276|consensus 100.0 5.6E-28 1.2E-32 285.2 35.8 378 449-880 30-453 (794)
46 KOG0282|consensus 100.0 5E-30 1.1E-34 297.2 18.3 290 509-842 205-503 (503)
47 KOG0292|consensus 100.0 4.2E-28 9.2E-33 294.8 34.6 400 453-881 30-481 (1202)
48 KOG1474|consensus 100.0 1.3E-30 2.7E-35 337.2 11.8 253 1385-1638 4-329 (640)
49 PLN00181 protein SPA1-RELATED; 100.0 1.8E-27 3.8E-32 325.1 41.4 307 497-843 457-792 (793)
50 KOG0275|consensus 100.0 5.3E-29 1.2E-33 272.7 20.1 286 473-793 210-507 (508)
51 KOG0293|consensus 100.0 1.2E-28 2.6E-33 278.9 23.4 293 510-846 216-515 (519)
52 KOG0266|consensus 100.0 3.4E-27 7.4E-32 300.4 33.9 293 511-844 151-454 (456)
53 KOG0643|consensus 100.0 9.1E-28 2E-32 259.3 24.0 296 471-796 5-318 (327)
54 KOG1408|consensus 100.0 9.3E-27 2E-31 276.8 34.7 402 466-878 68-712 (1080)
55 KOG0265|consensus 100.0 2.8E-27 6.2E-32 260.0 27.8 288 510-842 39-336 (338)
56 KOG1474|consensus 100.0 7.8E-29 1.7E-33 320.6 18.2 223 1-224 37-330 (640)
57 KOG0313|consensus 100.0 3.1E-27 6.8E-32 266.5 28.6 290 516-844 103-418 (423)
58 KOG0640|consensus 100.0 3.2E-27 6.9E-32 258.5 26.8 297 470-794 106-425 (430)
59 KOG0278|consensus 100.0 1.1E-27 2.4E-32 255.8 20.8 293 512-850 8-303 (334)
60 KOG0288|consensus 100.0 3.7E-28 8E-33 276.4 17.6 286 470-792 169-458 (459)
61 KOG1539|consensus 100.0 4.2E-26 9E-31 278.4 35.7 366 446-844 174-648 (910)
62 KOG0772|consensus 100.0 5.3E-27 1.2E-31 272.0 26.2 302 469-793 160-485 (641)
63 KOG0313|consensus 100.0 8.4E-27 1.8E-31 263.0 26.8 294 474-794 103-417 (423)
64 KOG0285|consensus 100.0 3.2E-27 7E-32 263.3 23.0 275 446-752 165-439 (460)
65 KOG0643|consensus 100.0 7.7E-27 1.7E-31 252.2 23.7 297 513-845 5-318 (327)
66 KOG1539|consensus 99.9 3.9E-25 8.5E-30 270.0 38.7 407 443-869 123-636 (910)
67 KOG0278|consensus 99.9 7.3E-27 1.6E-31 249.5 19.7 290 470-799 8-301 (334)
68 KOG0274|consensus 99.9 8E-26 1.7E-30 286.1 32.3 278 474-799 206-486 (537)
69 KOG1446|consensus 99.9 8.6E-25 1.9E-29 243.8 35.5 296 466-796 4-304 (311)
70 KOG1407|consensus 99.9 1.1E-25 2.4E-30 242.8 27.0 277 470-786 14-293 (313)
71 KOG1407|consensus 99.9 2.9E-25 6.2E-30 239.6 27.3 288 512-845 14-312 (313)
72 KOG0289|consensus 99.9 1.8E-25 4E-30 255.4 26.2 284 477-794 220-505 (506)
73 KOG0283|consensus 99.9 7.3E-26 1.6E-30 280.3 24.5 257 464-754 254-578 (712)
74 KOG0973|consensus 99.9 2.6E-25 5.6E-30 281.3 29.3 314 517-854 12-365 (942)
75 KOG0300|consensus 99.9 1.8E-25 3.8E-30 244.9 23.3 296 465-797 137-478 (481)
76 KOG0274|consensus 99.9 6E-25 1.3E-29 278.1 31.6 279 442-764 216-494 (537)
77 KOG0275|consensus 99.9 5E-26 1.1E-30 249.5 18.6 285 516-842 211-507 (508)
78 KOG0305|consensus 99.9 5.4E-25 1.2E-29 267.7 29.3 278 482-799 183-465 (484)
79 KOG0640|consensus 99.9 1.8E-25 3.9E-30 244.9 22.6 295 512-842 106-424 (430)
80 KOG0308|consensus 99.9 6.5E-26 1.4E-30 270.1 20.7 354 474-853 19-402 (735)
81 KOG0772|consensus 99.9 2.1E-25 4.6E-30 258.9 23.8 310 508-841 157-484 (641)
82 KOG0299|consensus 99.9 7.8E-25 1.7E-29 253.0 28.3 295 470-792 136-453 (479)
83 cd05496 Bromo_WDR9_II Bromodom 99.9 1.2E-26 2.5E-31 234.4 11.6 111 115-225 3-113 (119)
84 KOG0268|consensus 99.9 3.6E-26 7.8E-31 256.0 16.3 292 510-851 58-352 (433)
85 KOG0277|consensus 99.9 5.7E-25 1.2E-29 236.4 21.9 282 480-794 12-308 (311)
86 KOG0641|consensus 99.9 3.3E-23 7.3E-28 217.7 34.3 308 464-844 21-349 (350)
87 KOG2106|consensus 99.9 3E-23 6.6E-28 240.6 35.1 377 469-876 97-518 (626)
88 KOG1446|consensus 99.9 3.2E-23 6.9E-28 231.4 34.0 294 509-844 5-303 (311)
89 KOG0647|consensus 99.9 2.6E-24 5.6E-29 236.8 24.9 283 474-783 25-311 (347)
90 PTZ00421 coronin; Provisional 99.9 1.6E-23 3.6E-28 265.3 35.9 268 475-774 19-313 (493)
91 KOG0310|consensus 99.9 2.2E-24 4.7E-29 251.4 25.3 285 476-798 26-312 (487)
92 cd05496 Bromo_WDR9_II Bromodom 99.9 1.3E-25 2.7E-30 227.0 11.7 113 1530-1642 3-115 (119)
93 KOG1063|consensus 99.9 7.1E-24 1.5E-28 254.6 28.4 381 449-846 164-650 (764)
94 KOG0277|consensus 99.9 3.6E-24 7.7E-29 230.3 22.5 283 522-843 12-308 (311)
95 KOG0283|consensus 99.9 9.5E-24 2.1E-28 261.6 28.8 304 511-847 259-579 (712)
96 KOG2096|consensus 99.9 1.3E-23 2.8E-28 231.6 26.5 299 469-794 79-401 (420)
97 KOG0301|consensus 99.9 1.3E-23 2.7E-28 252.7 28.2 284 465-797 3-290 (745)
98 KOG0288|consensus 99.9 8E-25 1.7E-29 249.4 16.6 276 438-749 179-458 (459)
99 KOG2048|consensus 99.9 2.4E-22 5.1E-27 241.9 37.3 284 475-795 24-319 (691)
100 KOG0316|consensus 99.9 1E-23 2.2E-28 224.0 22.7 264 445-750 30-297 (307)
101 KOG0268|consensus 99.9 1.7E-24 3.7E-29 242.6 17.5 286 471-799 61-349 (433)
102 KOG1408|consensus 99.9 5.6E-23 1.2E-27 245.0 30.4 328 480-845 328-714 (1080)
103 KOG0308|consensus 99.9 6.5E-24 1.4E-28 253.2 22.3 284 523-845 29-328 (735)
104 KOG0310|consensus 99.9 2.4E-23 5.2E-28 242.7 26.3 282 518-847 26-312 (487)
105 PTZ00420 coronin; Provisional 99.9 1.4E-22 3.1E-27 257.3 34.8 229 449-696 49-296 (568)
106 KOG0973|consensus 99.9 2.2E-23 4.8E-28 263.9 27.1 282 445-755 26-358 (942)
107 PTZ00421 coronin; Provisional 99.9 2.8E-22 6.1E-27 254.1 36.6 210 471-698 70-295 (493)
108 PTZ00420 coronin; Provisional 99.9 2E-22 4.3E-27 256.0 35.0 246 494-774 50-316 (568)
109 cd05505 Bromo_WSTF_like Bromod 99.9 8.2E-25 1.8E-29 213.9 10.2 95 119-214 2-96 (97)
110 cd05495 Bromo_cbp_like Bromodo 99.9 1.3E-24 2.9E-29 217.4 11.9 104 115-219 1-107 (108)
111 KOG2106|consensus 99.9 8.8E-22 1.9E-26 228.6 36.7 347 451-843 219-625 (626)
112 KOG0294|consensus 99.9 8E-23 1.7E-27 226.3 26.4 248 465-754 32-283 (362)
113 KOG1332|consensus 99.9 1.9E-23 4.1E-28 223.6 19.6 255 470-752 5-286 (299)
114 KOG1273|consensus 99.9 1.1E-22 2.5E-27 224.1 25.4 296 479-796 26-323 (405)
115 KOG2048|consensus 99.9 4.2E-21 9.1E-26 231.3 40.9 410 444-880 80-549 (691)
116 KOG0301|consensus 99.9 1.8E-22 3.8E-27 243.0 28.8 285 507-846 3-290 (745)
117 KOG0300|consensus 99.9 5.9E-23 1.3E-27 225.2 21.7 321 491-846 127-478 (481)
118 KOG1063|consensus 99.9 1.1E-21 2.4E-26 235.8 33.8 404 446-881 71-650 (764)
119 cd05497 Bromo_Brdt_I_like Brom 99.9 4.7E-24 1E-28 212.8 11.3 101 117-218 5-107 (107)
120 KOG1036|consensus 99.9 3.8E-22 8.3E-27 221.3 26.2 282 476-785 13-294 (323)
121 cd05510 Bromo_SPT7_like Bromod 99.9 5.8E-24 1.3E-28 213.2 10.8 106 114-219 4-110 (112)
122 KOG0294|consensus 99.9 6.3E-22 1.4E-26 219.2 27.7 269 491-799 4-285 (362)
123 KOG0641|consensus 99.9 1.3E-21 2.7E-26 206.0 28.4 261 466-752 79-349 (350)
124 KOG1036|consensus 99.9 8.6E-22 1.9E-26 218.5 28.2 269 518-834 13-294 (323)
125 KOG0305|consensus 99.9 5.7E-22 1.2E-26 241.5 28.6 280 522-846 181-463 (484)
126 cd05504 Bromo_Acf1_like Bromod 99.9 1.4E-23 3.1E-28 212.3 11.6 103 115-218 10-112 (115)
127 cd05501 Bromo_SP100C_like Brom 99.9 1.8E-23 3.9E-28 203.4 11.9 98 119-220 4-101 (102)
128 cd05507 Bromo_brd8_like Bromod 99.9 1.2E-23 2.6E-28 209.6 10.9 101 117-218 3-103 (104)
129 cd05503 Bromo_BAZ2A_B_like Bro 99.9 1.1E-23 2.4E-28 207.5 10.1 96 119-215 2-97 (97)
130 KOG0646|consensus 99.9 5.8E-22 1.3E-26 230.0 25.9 290 493-825 12-330 (476)
131 KOG4283|consensus 99.9 1E-21 2.2E-26 214.6 25.0 295 473-794 40-364 (397)
132 cd05495 Bromo_cbp_like Bromodo 99.9 2.7E-23 5.8E-28 208.1 11.4 104 1530-1634 1-107 (108)
133 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.7E-20 3.8E-25 226.8 38.4 295 488-824 1-300 (300)
134 KOG0289|consensus 99.9 1.8E-21 3.9E-26 223.0 27.4 285 519-843 220-505 (506)
135 cd05505 Bromo_WSTF_like Bromod 99.9 1.9E-23 4.1E-28 204.4 9.8 94 1535-1629 3-96 (97)
136 KOG0264|consensus 99.9 6.3E-22 1.4E-26 230.1 23.8 264 472-752 120-404 (422)
137 KOG1445|consensus 99.9 3.9E-21 8.4E-26 226.5 29.7 206 469-691 72-291 (1012)
138 KOG1332|consensus 99.9 3.5E-22 7.6E-27 214.0 19.1 266 515-844 8-286 (299)
139 cd05508 Bromo_RACK7 Bromodomai 99.9 4.3E-23 9.3E-28 202.1 10.5 96 117-214 3-98 (99)
140 KOG0299|consensus 99.9 2.9E-21 6.4E-26 223.7 26.6 283 555-868 137-443 (479)
141 KOG4283|consensus 99.9 2.5E-21 5.4E-26 211.6 24.2 298 515-843 40-364 (397)
142 KOG0646|consensus 99.9 6.7E-22 1.5E-26 229.5 20.9 229 476-735 81-333 (476)
143 KOG0269|consensus 99.9 4.8E-22 1E-26 241.6 20.3 288 478-798 41-343 (839)
144 KOG1274|consensus 99.9 6.7E-21 1.4E-25 236.2 30.5 285 515-841 10-297 (933)
145 KOG0639|consensus 99.9 1.1E-21 2.4E-26 226.6 22.0 282 516-843 417-703 (705)
146 cd05502 Bromo_tif1_like Bromod 99.9 1E-22 2.3E-27 205.3 11.7 103 116-220 3-108 (109)
147 KOG2096|consensus 99.9 8.5E-21 1.9E-25 209.5 27.4 305 512-843 80-401 (420)
148 cd05516 Bromo_SNF2L2 Bromodoma 99.9 8E-23 1.7E-27 204.5 10.1 101 117-218 1-107 (107)
149 KOG2445|consensus 99.9 1.3E-20 2.7E-25 208.3 27.8 286 472-762 9-331 (361)
150 cd05509 Bromo_gcn5_like Bromod 99.9 1.1E-22 2.4E-27 202.9 10.5 100 118-218 2-101 (101)
151 KOG0321|consensus 99.9 2.6E-21 5.7E-26 230.7 23.7 302 482-799 55-395 (720)
152 KOG0647|consensus 99.9 7.8E-21 1.7E-25 209.6 25.4 259 448-741 44-313 (347)
153 cd05507 Bromo_brd8_like Bromod 99.9 1.3E-22 2.7E-27 202.3 10.4 102 1531-1633 2-103 (104)
154 cd05497 Bromo_Brdt_I_like Brom 99.9 1.4E-22 2.9E-27 202.4 10.4 100 1532-1632 5-106 (107)
155 cd05510 Bromo_SPT7_like Bromod 99.9 1.2E-22 2.6E-27 203.7 9.7 105 1530-1634 5-110 (112)
156 cd05506 Bromo_plant1 Bromodoma 99.9 1.4E-22 3.1E-27 201.5 9.9 96 119-215 2-99 (99)
157 cd05513 Bromo_brd7_like Bromod 99.9 1.6E-22 3.4E-27 197.8 9.8 95 117-212 1-95 (98)
158 KOG0650|consensus 99.9 8.2E-21 1.8E-25 224.5 25.8 320 470-841 394-732 (733)
159 KOG1538|consensus 99.9 1.8E-20 3.9E-25 221.9 28.4 273 478-794 14-292 (1081)
160 KOG0264|consensus 99.9 5.2E-21 1.1E-25 222.5 23.5 267 558-845 122-405 (422)
161 cd05528 Bromo_AAA Bromodomain; 99.9 2.8E-22 6E-27 201.3 11.1 103 117-219 3-108 (112)
162 cd05499 Bromo_BDF1_2_II Bromod 99.9 2.2E-22 4.7E-27 200.9 10.2 96 119-215 2-102 (102)
163 cd05498 Bromo_Brdt_II_like Bro 99.9 2.6E-22 5.6E-27 200.7 10.1 96 119-215 2-102 (102)
164 cd05504 Bromo_Acf1_like Bromod 99.9 3.4E-22 7.4E-27 202.2 10.7 101 1532-1633 12-112 (115)
165 cd05503 Bromo_BAZ2A_B_like Bro 99.9 2.8E-22 6.1E-27 197.5 9.7 95 1535-1630 3-97 (97)
166 cd05516 Bromo_SNF2L2 Bromodoma 99.9 2.6E-22 5.7E-27 200.8 9.6 101 1532-1633 1-107 (107)
167 cd05512 Bromo_brd1_like Bromod 99.9 4E-22 8.7E-27 195.7 9.8 93 118-211 2-94 (98)
168 cd05500 Bromo_BDF1_2_I Bromodo 99.9 7.2E-22 1.6E-26 197.1 11.0 99 116-215 3-103 (103)
169 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 3.1E-19 6.6E-24 216.0 35.9 276 530-853 1-288 (300)
170 cd05501 Bromo_SP100C_like Brom 99.9 1.2E-21 2.5E-26 190.8 11.4 96 1535-1634 5-100 (102)
171 KOG2055|consensus 99.9 4.6E-20 1E-24 213.3 26.1 289 476-795 213-512 (514)
172 cd05511 Bromo_TFIID Bromodomai 99.9 1.2E-21 2.7E-26 197.4 10.3 104 120-224 3-106 (112)
173 cd05502 Bromo_tif1_like Bromod 99.9 1.9E-21 4.1E-26 196.2 11.6 102 1531-1634 3-107 (109)
174 cd05508 Bromo_RACK7 Bromodomai 99.9 1.4E-21 3.1E-26 191.4 9.9 96 1532-1629 3-98 (99)
175 KOG2055|consensus 99.8 9.4E-20 2E-24 210.8 25.3 290 518-844 213-512 (514)
176 KOG0639|consensus 99.8 2.6E-20 5.7E-25 215.4 20.6 282 472-794 415-703 (705)
177 KOG0267|consensus 99.8 1.2E-21 2.6E-26 236.2 10.0 236 471-741 23-258 (825)
178 cd05524 Bromo_polybromo_I Brom 99.8 2.4E-21 5.2E-26 195.4 10.5 102 118-220 3-110 (113)
179 cd05519 Bromo_SNF2 Bromodomain 99.8 2E-21 4.3E-26 194.0 9.7 97 118-215 1-103 (103)
180 cd05509 Bromo_gcn5_like Bromod 99.8 2.2E-21 4.8E-26 193.6 10.0 100 1533-1633 2-101 (101)
181 KOG1274|consensus 99.8 2.3E-19 5E-24 222.7 29.1 270 473-780 10-285 (933)
182 cd05515 Bromo_polybromo_V Brom 99.8 2.4E-21 5.2E-26 193.5 9.5 97 119-216 2-104 (105)
183 cd05528 Bromo_AAA Bromodomain; 99.8 3.6E-21 7.9E-26 193.3 10.6 103 1532-1634 3-108 (112)
184 KOG4328|consensus 99.8 2.1E-19 4.6E-24 208.0 26.2 307 503-845 171-496 (498)
185 cd05517 Bromo_polybromo_II Bro 99.8 2.4E-21 5.1E-26 192.1 8.9 94 119-213 2-101 (103)
186 KOG4328|consensus 99.8 1.8E-19 3.8E-24 208.6 25.5 306 467-795 177-495 (498)
187 cd05506 Bromo_plant1 Bromodoma 99.8 3.4E-21 7.4E-26 191.6 9.8 96 1534-1630 2-99 (99)
188 cd05513 Bromo_brd7_like Bromod 99.8 4.5E-21 9.8E-26 187.5 9.5 93 1533-1626 2-94 (98)
189 cd05499 Bromo_BDF1_2_II Bromod 99.8 4.7E-21 1E-25 191.3 9.8 95 1535-1630 3-102 (102)
190 cd05498 Bromo_Brdt_II_like Bro 99.8 5E-21 1.1E-25 191.4 10.0 96 1534-1630 2-102 (102)
191 cd05525 Bromo_ASH1 Bromodomain 99.8 6.9E-21 1.5E-25 189.3 10.8 96 118-214 3-104 (106)
192 cd05520 Bromo_polybromo_III Br 99.8 4.9E-21 1.1E-25 189.8 9.3 92 122-214 5-102 (103)
193 cd05518 Bromo_polybromo_IV Bro 99.8 4.8E-21 1.1E-25 189.6 9.2 94 120-214 3-102 (103)
194 KOG0270|consensus 99.8 1.9E-19 4.1E-24 208.1 23.1 269 456-757 154-454 (463)
195 cd05500 Bromo_BDF1_2_I Bromodo 99.8 1E-20 2.2E-25 188.9 10.7 99 1531-1630 3-103 (103)
196 cd05524 Bromo_polybromo_I Brom 99.8 8.5E-21 1.8E-25 191.5 9.9 102 1533-1635 3-110 (113)
197 cd05515 Bromo_polybromo_V Brom 99.8 7.7E-21 1.7E-25 189.8 9.4 97 1534-1631 2-104 (105)
198 cd05512 Bromo_brd1_like Bromod 99.8 8.4E-21 1.8E-25 186.4 9.5 93 1533-1626 2-94 (98)
199 cd05525 Bromo_ASH1 Bromodomain 99.8 1.1E-20 2.5E-25 187.8 10.3 96 1533-1629 3-104 (106)
200 cd05517 Bromo_polybromo_II Bro 99.8 7.3E-21 1.6E-25 188.6 8.8 94 1534-1628 2-101 (103)
201 COG2319 FOG: WD40 repeat [Gene 99.8 6.1E-17 1.3E-21 202.7 46.4 354 449-845 82-443 (466)
202 KOG4227|consensus 99.8 1.9E-19 4.1E-24 202.4 20.6 301 470-795 50-387 (609)
203 cd05529 Bromo_WDR9_I_like Brom 99.8 1.9E-20 4.2E-25 193.3 11.4 102 115-217 22-127 (128)
204 cd05519 Bromo_SNF2 Bromodomain 99.8 1.2E-20 2.6E-25 188.3 9.6 97 1533-1630 1-103 (103)
205 KOG0269|consensus 99.8 4.6E-20 9.9E-25 224.6 16.4 242 478-750 89-338 (839)
206 cd05511 Bromo_TFIID Bromodomai 99.8 2E-20 4.4E-25 188.7 11.0 103 1535-1638 3-105 (112)
207 cd05520 Bromo_polybromo_III Br 99.8 1.3E-20 2.8E-25 186.9 8.9 93 1536-1629 4-102 (103)
208 KOG1273|consensus 99.8 4.3E-19 9.3E-24 196.1 21.6 297 521-866 26-338 (405)
209 cd05518 Bromo_polybromo_IV Bro 99.8 1.3E-20 2.9E-25 186.5 8.7 94 1535-1629 3-102 (103)
210 KOG0321|consensus 99.8 4.2E-19 9E-24 212.1 22.6 283 450-754 70-393 (720)
211 COG5076 Transcription factor i 99.8 1.7E-20 3.7E-25 231.5 10.8 217 1372-1633 144-363 (371)
212 KOG0302|consensus 99.8 8.4E-19 1.8E-23 198.4 23.1 214 469-695 144-380 (440)
213 KOG0267|consensus 99.8 2.6E-20 5.6E-25 224.9 11.2 256 488-786 4-259 (825)
214 cd05529 Bromo_WDR9_I_like Brom 99.8 7.9E-20 1.7E-24 188.8 13.2 103 1370-1472 21-127 (128)
215 KOG2445|consensus 99.8 2.6E-18 5.6E-23 190.2 25.2 261 515-796 10-319 (361)
216 COG2319 FOG: WD40 repeat [Gene 99.8 2.9E-16 6.3E-21 196.6 46.9 364 471-880 60-443 (466)
217 KOG1034|consensus 99.8 1E-18 2.2E-23 194.7 20.4 305 471-795 33-383 (385)
218 KOG0322|consensus 99.8 4.8E-19 1E-23 192.0 16.6 301 469-794 7-322 (323)
219 cd05521 Bromo_Rsc1_2_I Bromodo 99.8 8E-20 1.7E-24 181.5 9.4 96 118-216 2-103 (106)
220 cd05522 Bromo_Rsc1_2_II Bromod 99.8 1.1E-19 2.3E-24 181.1 9.7 95 119-214 3-103 (104)
221 smart00297 BROMO bromo domain. 99.8 1.6E-19 3.4E-24 183.5 10.7 100 117-217 7-106 (107)
222 KOG1963|consensus 99.8 1.2E-16 2.6E-21 199.2 37.9 378 472-880 12-539 (792)
223 KOG1009|consensus 99.8 8E-18 1.7E-22 192.7 24.8 312 476-849 13-377 (434)
224 KOG1445|consensus 99.8 2.6E-17 5.7E-22 194.6 29.8 193 637-845 600-799 (1012)
225 cd05521 Bromo_Rsc1_2_I Bromodo 99.8 1.5E-19 3.3E-24 179.5 9.0 96 1533-1631 2-103 (106)
226 KOG0302|consensus 99.8 2.7E-18 5.9E-23 194.3 20.1 268 556-840 147-435 (440)
227 KOG0307|consensus 99.8 7.7E-19 1.7E-23 223.6 16.3 296 523-847 11-330 (1049)
228 KOG0270|consensus 99.8 1.4E-17 3.1E-22 192.7 25.1 301 522-849 129-454 (463)
229 PF06507 Auxin_resp: Auxin res 99.8 2.1E-19 4.5E-24 167.1 7.9 69 1247-1315 5-83 (83)
230 KOG4378|consensus 99.8 1.5E-17 3.2E-22 192.9 24.4 284 499-826 13-305 (673)
231 KOG0307|consensus 99.8 1.7E-18 3.6E-23 220.6 17.7 286 481-799 11-331 (1049)
232 KOG4378|consensus 99.8 9.8E-18 2.1E-22 194.4 21.4 270 540-848 12-284 (673)
233 KOG1963|consensus 99.8 4E-16 8.6E-21 194.7 37.1 376 446-846 29-540 (792)
234 KOG0650|consensus 99.8 1.9E-17 4.2E-22 196.3 24.2 279 510-842 392-678 (733)
235 KOG1472|consensus 99.8 8.7E-19 1.9E-23 219.4 11.2 104 1532-1636 606-709 (720)
236 KOG1034|consensus 99.8 2E-17 4.4E-22 184.6 20.5 260 474-752 87-383 (385)
237 cd05522 Bromo_Rsc1_2_II Bromod 99.8 9.4E-19 2E-23 174.4 9.0 94 1535-1629 4-103 (104)
238 smart00297 BROMO bromo domain. 99.8 1.6E-18 3.4E-23 176.2 9.9 101 1531-1632 6-106 (107)
239 KOG1188|consensus 99.8 2.2E-17 4.8E-22 185.5 18.9 288 489-795 41-346 (376)
240 KOG1009|consensus 99.8 7E-17 1.5E-21 185.1 23.2 305 446-799 28-376 (434)
241 PF00439 Bromodomain: Bromodom 99.7 2.1E-18 4.6E-23 166.9 8.0 84 122-206 1-84 (84)
242 KOG0008|consensus 99.7 5E-18 1.1E-22 217.0 12.8 215 1381-1634 1269-1483(1563)
243 KOG0642|consensus 99.7 1.5E-17 3.3E-22 197.5 16.0 265 465-764 283-573 (577)
244 KOG2919|consensus 99.7 1.7E-16 3.7E-21 176.5 23.2 282 521-834 52-360 (406)
245 cd05492 Bromo_ZMYND11 Bromodom 99.7 6.5E-18 1.4E-22 167.3 10.8 97 122-219 5-107 (109)
246 KOG1188|consensus 99.7 1E-16 2.2E-21 180.2 21.7 288 531-844 41-346 (376)
247 KOG0642|consensus 99.7 2.4E-17 5.2E-22 195.8 17.4 269 512-799 288-565 (577)
248 cd04369 Bromodomain Bromodomai 99.7 4.8E-18 1E-22 170.1 8.9 96 119-215 2-99 (99)
249 KOG4227|consensus 99.7 2.3E-16 4.9E-21 177.9 22.7 306 511-842 49-385 (609)
250 KOG2919|consensus 99.7 5.4E-16 1.2E-20 172.5 25.0 281 479-786 52-361 (406)
251 cd05526 Bromo_polybromo_VI Bro 99.7 1.8E-17 3.9E-22 163.1 10.1 100 1532-1634 3-108 (110)
252 KOG1587|consensus 99.7 1E-15 2.2E-20 192.7 27.8 282 541-846 223-518 (555)
253 KOG0322|consensus 99.7 1.7E-16 3.6E-21 172.5 16.4 295 510-843 6-322 (323)
254 KOG1538|consensus 99.7 4.3E-16 9.3E-21 185.3 21.2 277 520-846 14-295 (1081)
255 PF00439 Bromodomain: Bromodom 99.7 1.7E-17 3.7E-22 160.6 7.8 84 1537-1621 1-84 (84)
256 KOG0303|consensus 99.7 7E-16 1.5E-20 175.7 20.9 209 471-696 76-297 (472)
257 KOG0290|consensus 99.7 3.3E-15 7.2E-20 164.3 25.1 308 511-840 38-361 (364)
258 KOG1587|consensus 99.7 3.8E-15 8.2E-20 187.6 29.2 281 497-796 221-517 (555)
259 cd04369 Bromodomain Bromodomai 99.7 3.6E-17 7.8E-22 163.8 8.4 96 1534-1630 2-99 (99)
260 KOG1517|consensus 99.7 1.9E-15 4.1E-20 188.9 24.9 295 474-798 1062-1384(1387)
261 cd05492 Bromo_ZMYND11 Bromodom 99.7 8.3E-17 1.8E-21 159.5 10.4 96 1538-1634 6-107 (109)
262 KOG1240|consensus 99.7 4.9E-15 1.1E-19 188.4 28.2 361 465-842 1037-1431(1431)
263 KOG1832|consensus 99.7 3.5E-17 7.6E-22 199.2 8.6 394 299-740 848-1320(1516)
264 KOG1334|consensus 99.7 3.5E-16 7.7E-21 182.4 16.3 315 509-846 133-468 (559)
265 KOG1334|consensus 99.7 2E-16 4.4E-21 184.4 13.9 321 463-798 129-469 (559)
266 KOG1007|consensus 99.7 5.5E-15 1.2E-19 162.3 22.8 279 487-795 25-361 (370)
267 cd05526 Bromo_polybromo_VI Bro 99.7 2.2E-16 4.8E-21 155.5 10.4 99 117-218 3-107 (110)
268 KOG1007|consensus 99.7 9.2E-15 2E-19 160.6 23.9 292 531-845 27-362 (370)
269 KOG1517|consensus 99.7 6.4E-15 1.4E-19 184.3 25.5 304 520-847 1066-1384(1387)
270 KOG1310|consensus 99.7 7.5E-16 1.6E-20 180.7 16.3 255 464-758 38-309 (758)
271 KOG0649|consensus 99.7 2.9E-14 6.4E-19 153.2 26.6 287 520-841 12-313 (325)
272 PRK11028 6-phosphogluconolacto 99.6 2.9E-13 6.3E-18 166.9 36.2 279 492-795 6-304 (330)
273 PRK11028 6-phosphogluconolacto 99.6 2.6E-13 5.7E-18 167.4 35.2 281 533-844 5-304 (330)
274 KOG4497|consensus 99.6 6.6E-15 1.4E-19 163.9 17.6 313 481-847 13-394 (447)
275 KOG0303|consensus 99.6 2.8E-14 6.1E-19 162.8 21.8 229 513-774 76-319 (472)
276 KOG1524|consensus 99.6 2E-14 4.3E-19 168.6 19.7 269 516-842 12-284 (737)
277 KOG1523|consensus 99.6 1.4E-13 3.1E-18 154.0 23.9 209 476-696 10-239 (361)
278 KOG0290|consensus 99.6 2.2E-13 4.7E-18 150.2 22.8 247 473-748 93-361 (364)
279 KOG1245|consensus 99.6 1.6E-15 3.4E-20 207.2 6.8 96 122-219 1306-1401(1404)
280 KOG1524|consensus 99.6 1.1E-13 2.4E-18 162.4 20.9 265 474-793 12-284 (737)
281 KOG0771|consensus 99.6 3.1E-13 6.6E-18 157.3 24.4 198 622-845 148-355 (398)
282 KOG2110|consensus 99.6 1.7E-12 3.7E-17 148.2 29.7 323 475-845 4-331 (391)
283 KOG1523|consensus 99.6 2.7E-13 5.8E-18 151.8 22.1 256 514-786 6-269 (361)
284 KOG1472|consensus 99.6 8.9E-15 1.9E-19 183.8 11.7 107 115-222 604-710 (720)
285 KOG0644|consensus 99.5 1.5E-14 3.2E-19 177.1 11.7 272 510-872 182-461 (1113)
286 KOG0649|consensus 99.5 3.4E-13 7.4E-18 145.1 19.6 231 620-863 12-259 (325)
287 KOG1310|consensus 99.5 6.4E-14 1.4E-18 164.8 15.4 181 510-694 42-232 (758)
288 PF02239 Cytochrom_D1: Cytochr 99.5 3.5E-12 7.6E-17 157.5 31.4 341 489-853 6-356 (369)
289 KOG2110|consensus 99.5 1.5E-12 3.3E-17 148.6 25.7 244 518-847 5-251 (391)
290 KOG0771|consensus 99.5 1E-13 2.2E-18 161.2 16.0 205 480-694 148-355 (398)
291 KOG4497|consensus 99.5 7.5E-13 1.6E-17 147.8 21.5 326 476-838 48-426 (447)
292 PRK01742 tolB translocation pr 99.5 6.4E-13 1.4E-17 169.3 23.3 232 497-774 183-425 (429)
293 KOG1240|consensus 99.5 1.2E-12 2.6E-17 167.1 24.9 272 503-799 1034-1338(1431)
294 KOG1272|consensus 99.5 8E-14 1.7E-18 162.1 13.1 266 478-787 131-401 (545)
295 COG5076 Transcription factor i 99.5 1E-14 2.2E-19 180.4 5.8 173 1-218 191-363 (371)
296 KOG1245|consensus 99.5 1.6E-14 3.6E-19 197.4 6.9 95 1537-1633 1306-1400(1404)
297 KOG2139|consensus 99.5 7E-12 1.5E-16 142.2 26.6 295 519-844 99-431 (445)
298 KOG1354|consensus 99.5 2.6E-12 5.7E-17 144.6 23.0 275 518-798 25-362 (433)
299 KOG2315|consensus 99.5 2.7E-11 5.8E-16 145.2 31.9 324 476-850 34-396 (566)
300 KOG0008|consensus 99.5 6.3E-14 1.4E-18 180.2 8.6 181 1-220 1304-1484(1563)
301 PRK01742 tolB translocation pr 99.4 3E-12 6.6E-17 163.1 22.3 237 539-825 183-426 (429)
302 KOG2394|consensus 99.4 8.1E-12 1.7E-16 147.9 22.3 245 478-774 125-384 (636)
303 KOG1828|consensus 99.4 4.1E-14 8.8E-19 162.0 3.1 238 1382-1624 28-298 (418)
304 KOG2321|consensus 99.4 1.6E-11 3.4E-16 146.4 23.7 285 474-796 49-344 (703)
305 KOG2139|consensus 99.4 1E-10 2.2E-15 133.0 27.2 292 477-795 99-431 (445)
306 KOG2321|consensus 99.4 4.7E-11 1E-15 142.3 25.3 290 516-844 49-343 (703)
307 KOG2111|consensus 99.4 4.2E-10 9E-15 126.8 30.4 239 520-798 7-259 (346)
308 KOG1272|consensus 99.4 1.6E-12 3.5E-17 151.4 11.6 276 519-841 130-406 (545)
309 COG5354 Uncharacterized protei 99.4 4.5E-10 9.8E-15 133.1 30.5 331 467-849 23-400 (561)
310 PF02239 Cytochrom_D1: Cytochr 99.4 2.9E-10 6.2E-15 140.6 30.2 310 532-885 8-353 (369)
311 PRK03629 tolB translocation pr 99.3 1.7E-10 3.7E-15 146.9 28.7 236 498-774 179-427 (429)
312 KOG2111|consensus 99.3 9.4E-10 2E-14 124.0 30.4 238 479-753 8-257 (346)
313 PRK03629 tolB translocation pr 99.3 4.6E-10 9.9E-15 142.9 32.2 235 540-824 179-427 (429)
314 KOG1912|consensus 99.3 1.5E-10 3.2E-15 141.8 25.4 363 477-851 16-558 (1062)
315 KOG1409|consensus 99.3 3.5E-11 7.5E-16 136.1 18.5 337 466-845 14-395 (404)
316 PRK04922 tolB translocation pr 99.3 2.1E-10 4.7E-15 146.5 27.7 235 540-824 184-432 (433)
317 PRK02889 tolB translocation pr 99.3 2E-10 4.3E-15 146.4 26.7 239 498-774 176-424 (427)
318 KOG3881|consensus 99.3 8.8E-11 1.9E-15 135.3 20.6 247 518-799 55-324 (412)
319 PRK04922 tolB translocation pr 99.3 3.1E-10 6.7E-15 145.0 25.8 235 498-774 184-432 (433)
320 PRK05137 tolB translocation pr 99.3 7.8E-10 1.7E-14 141.6 28.8 235 498-774 182-432 (435)
321 KOG0974|consensus 99.3 4.7E-10 1E-14 143.2 25.4 141 447-596 148-290 (967)
322 KOG2394|consensus 99.3 1.2E-10 2.5E-15 138.3 18.5 193 486-697 183-456 (636)
323 KOG1354|consensus 99.3 2E-10 4.4E-15 129.7 19.3 269 476-755 25-362 (433)
324 KOG0974|consensus 99.2 1.3E-09 2.8E-14 139.4 27.7 183 445-648 100-288 (967)
325 PF10282 Lactonase: Lactonase, 99.2 4.8E-08 1E-12 121.1 40.5 295 491-799 2-328 (345)
326 KOG1827|consensus 99.2 3.8E-12 8.3E-17 158.0 3.6 228 1373-1628 55-290 (629)
327 PRK02889 tolB translocation pr 99.2 1.5E-09 3.3E-14 138.3 26.8 238 540-825 176-425 (427)
328 KOG3881|consensus 99.2 5.1E-10 1.1E-14 129.2 19.5 275 472-774 51-341 (412)
329 KOG2041|consensus 99.2 3.1E-09 6.7E-14 128.8 26.6 284 476-796 14-338 (1189)
330 KOG1409|consensus 99.2 6.5E-10 1.4E-14 126.1 19.6 328 446-796 38-395 (404)
331 KOG1827|consensus 99.2 2.1E-11 4.5E-16 151.5 8.5 149 1434-1631 2-156 (629)
332 PRK05137 tolB translocation pr 99.2 6E-09 1.3E-13 133.5 28.5 234 540-824 182-432 (435)
333 COG5354 Uncharacterized protei 99.2 1.4E-08 2.9E-13 120.9 28.2 301 477-836 72-421 (561)
334 cd05494 Bromodomain_1 Bromodom 99.1 1.7E-11 3.7E-16 123.9 3.3 77 118-194 4-89 (114)
335 KOG1912|consensus 99.1 4.6E-08 9.9E-13 120.6 32.9 338 439-798 20-554 (1062)
336 KOG2315|consensus 99.1 9.2E-09 2E-13 123.9 26.3 311 444-797 45-392 (566)
337 PF08662 eIF2A: Eukaryotic tra 99.1 3.2E-09 7E-14 119.7 21.1 152 622-796 9-180 (194)
338 PF08662 eIF2A: Eukaryotic tra 99.1 1.9E-09 4.2E-14 121.6 19.2 114 720-846 58-181 (194)
339 TIGR03300 assembly_YfgL outer 99.1 3.7E-08 8.1E-13 124.0 32.5 300 488-841 65-376 (377)
340 PF10282 Lactonase: Lactonase, 99.1 9.7E-08 2.1E-12 118.4 35.2 281 533-844 2-322 (345)
341 KOG2314|consensus 99.1 1.2E-08 2.6E-13 121.8 25.3 308 479-835 213-558 (698)
342 COG4946 Uncharacterized protei 99.1 3.5E-07 7.6E-12 107.5 36.4 371 458-866 61-504 (668)
343 KOG4547|consensus 99.1 4.4E-09 9.4E-14 127.9 21.5 277 528-862 3-292 (541)
344 TIGR02800 propeller_TolB tol-p 99.1 1.4E-08 3E-13 129.7 27.7 233 498-772 170-416 (417)
345 KOG1828|consensus 99.1 4.9E-11 1.1E-15 137.2 3.7 206 1-209 62-298 (418)
346 COG2706 3-carboxymuconate cycl 99.1 3.9E-07 8.4E-12 105.9 35.1 281 497-845 15-322 (346)
347 TIGR02658 TTQ_MADH_Hv methylam 99.0 4.6E-07 9.9E-12 109.8 36.0 277 498-805 27-338 (352)
348 PF04762 IKI3: IKI3 family; I 99.0 5.2E-07 1.1E-11 123.1 40.8 369 453-846 96-566 (928)
349 PRK04792 tolB translocation pr 99.0 2.7E-08 5.9E-13 127.3 26.7 234 499-774 199-446 (448)
350 PRK00178 tolB translocation pr 99.0 6.8E-08 1.5E-12 123.8 29.6 234 541-824 180-427 (430)
351 PF04762 IKI3: IKI3 family; I 99.0 3.2E-07 6.9E-12 125.2 36.4 337 475-846 74-458 (928)
352 KOG4190|consensus 99.0 1.4E-09 2.9E-14 128.1 11.2 295 510-840 727-1032(1034)
353 PRK00178 tolB translocation pr 99.0 7.7E-08 1.7E-12 123.4 28.4 234 499-774 180-427 (430)
354 KOG0309|consensus 99.0 2.4E-09 5.2E-14 130.5 13.5 288 476-797 24-341 (1081)
355 KOG2041|consensus 99.0 2E-08 4.4E-13 121.9 21.0 291 518-844 14-337 (1189)
356 KOG1064|consensus 99.0 3.2E-09 7E-14 140.2 15.0 196 472-698 2204-2403(2439)
357 KOG4547|consensus 99.0 4.5E-08 9.8E-13 119.2 23.7 189 485-694 2-221 (541)
358 KOG1064|consensus 99.0 3.1E-09 6.7E-14 140.4 14.5 196 619-855 2209-2409(2439)
359 KOG4190|consensus 99.0 1.5E-09 3.2E-14 127.8 10.1 287 470-791 729-1032(1034)
360 KOG2314|consensus 99.0 1.5E-07 3.3E-12 112.6 26.4 293 455-786 232-558 (698)
361 cd05494 Bromodomain_1 Bromodom 99.0 2.6E-10 5.7E-15 115.3 3.0 78 1534-1611 5-91 (114)
362 COG5170 CDC55 Serine/threonine 98.9 1.2E-08 2.6E-13 113.7 15.4 291 476-796 26-368 (460)
363 PRK01029 tolB translocation pr 98.9 2.3E-07 5E-12 117.9 29.1 246 540-826 165-426 (428)
364 PRK01029 tolB translocation pr 98.9 2.8E-07 6E-12 117.2 29.8 244 498-774 165-424 (428)
365 TIGR02800 propeller_TolB tol-p 98.9 1.2E-07 2.5E-12 121.3 26.4 213 540-795 170-397 (417)
366 TIGR02658 TTQ_MADH_Hv methylam 98.9 1.1E-06 2.4E-11 106.6 32.4 275 540-852 27-338 (352)
367 KOG0280|consensus 98.9 1.3E-07 2.9E-12 105.8 22.2 281 539-846 45-335 (339)
368 KOG4532|consensus 98.9 2.3E-07 4.9E-12 102.5 23.1 265 497-797 51-333 (344)
369 PRK04792 tolB translocation pr 98.9 3.3E-07 7.2E-12 117.4 27.5 234 541-824 199-446 (448)
370 TIGR03300 assembly_YfgL outer 98.8 2.7E-06 5.9E-11 107.2 33.9 271 487-792 104-376 (377)
371 PLN02919 haloacid dehalogenase 98.8 2.3E-06 5E-11 119.2 35.9 270 480-799 571-892 (1057)
372 KOG0386|consensus 98.8 3.4E-09 7.5E-14 134.8 6.6 99 1535-1634 1027-1131(1157)
373 KOG0955|consensus 98.8 4.1E-09 8.9E-14 139.2 7.2 109 114-223 562-670 (1051)
374 cd05491 Bromo_TBP7_like Bromod 98.8 5.7E-09 1.2E-13 103.1 5.8 40 156-195 63-102 (119)
375 PLN02919 haloacid dehalogenase 98.8 2.5E-06 5.3E-11 118.9 33.4 272 564-848 571-892 (1057)
376 KOG0386|consensus 98.8 1E-08 2.2E-13 130.7 8.5 100 120-220 1027-1132(1157)
377 KOG0280|consensus 98.8 3.9E-07 8.5E-12 102.2 19.6 250 477-754 70-335 (339)
378 cd05491 Bromo_TBP7_like Bromod 98.7 1.3E-08 2.9E-13 100.5 6.1 42 1411-1452 62-103 (119)
379 COG2706 3-carboxymuconate cycl 98.7 1.1E-05 2.3E-10 94.3 30.6 272 585-869 15-309 (346)
380 PRK11138 outer membrane biogen 98.7 4E-06 8.7E-11 106.2 29.7 305 488-843 69-393 (394)
381 COG5170 CDC55 Serine/threonine 98.7 4.1E-07 8.9E-12 101.8 16.5 259 619-880 27-368 (460)
382 KOG0309|consensus 98.7 7.9E-08 1.7E-12 117.7 11.6 213 469-695 107-341 (1081)
383 KOG4714|consensus 98.7 2.6E-07 5.7E-12 101.7 13.6 211 563-796 39-255 (319)
384 KOG0882|consensus 98.6 7.4E-07 1.6E-11 104.7 17.9 300 474-792 7-369 (558)
385 KOG1645|consensus 98.6 1.9E-06 4E-11 100.5 20.2 271 500-795 175-461 (463)
386 KOG0955|consensus 98.6 4E-08 8.8E-13 130.1 7.2 105 1530-1635 563-667 (1051)
387 KOG1832|consensus 98.6 5.3E-08 1.2E-12 120.7 6.1 224 509-782 1092-1318(1516)
388 KOG3914|consensus 98.6 7.3E-07 1.6E-11 104.4 14.8 164 621-806 65-232 (390)
389 COG4946 Uncharacterized protei 98.5 4.5E-05 9.8E-10 90.3 27.2 146 473-636 356-506 (668)
390 KOG4532|consensus 98.4 2.2E-05 4.8E-10 87.2 21.3 242 488-752 84-331 (344)
391 PRK11138 outer membrane biogen 98.4 0.00021 4.5E-09 90.7 33.4 269 488-794 120-393 (394)
392 PF08450 SGL: SMP-30/Gluconola 98.4 0.00023 5.1E-09 84.0 31.5 220 481-740 4-244 (246)
393 KOG3914|consensus 98.4 3.7E-06 8E-11 98.7 14.9 158 522-698 66-228 (390)
394 KOG0882|consensus 98.4 3.7E-06 8E-11 99.0 14.8 261 517-799 8-309 (558)
395 PF15492 Nbas_N: Neuroblastoma 98.4 0.00011 2.4E-09 83.6 25.3 247 481-764 2-271 (282)
396 KOG1275|consensus 98.4 6.6E-06 1.4E-10 104.1 16.7 184 487-691 146-340 (1118)
397 KOG1920|consensus 98.3 0.00026 5.7E-09 93.2 30.9 205 477-699 69-328 (1265)
398 PF15492 Nbas_N: Neuroblastoma 98.3 0.00026 5.6E-09 80.8 26.2 205 619-853 44-268 (282)
399 PRK04043 tolB translocation pr 98.3 0.00021 4.5E-09 90.6 28.6 211 499-752 170-400 (419)
400 PF13360 PQQ_2: PQQ-like domai 98.3 0.00019 4E-09 84.1 26.6 224 496-759 1-237 (238)
401 PF08450 SGL: SMP-30/Gluconola 98.3 0.00054 1.2E-08 80.9 29.5 230 523-783 4-244 (246)
402 KOG4714|consensus 98.2 9.6E-06 2.1E-10 89.7 12.4 169 466-648 79-254 (319)
403 PF07433 DUF1513: Protein of u 98.2 0.00042 9.1E-09 81.5 26.5 250 481-785 9-276 (305)
404 cd00216 PQQ_DH Dehydrogenases 98.2 0.00093 2E-08 86.9 32.6 287 488-806 61-433 (488)
405 KOG2114|consensus 98.2 0.00016 3.5E-09 92.0 24.2 196 478-693 27-243 (933)
406 KOG4649|consensus 98.2 0.0029 6.3E-08 70.6 30.4 109 488-603 23-132 (354)
407 PRK04043 tolB translocation pr 98.2 0.00042 9.1E-09 87.9 27.6 191 478-694 189-401 (419)
408 KOG2114|consensus 98.2 0.00018 3.9E-09 91.6 23.0 221 525-767 30-259 (933)
409 KOG1275|consensus 98.2 1.8E-05 3.8E-10 100.4 14.1 169 463-647 164-341 (1118)
410 KOG2066|consensus 98.1 0.00013 2.8E-09 92.4 20.5 147 485-648 80-233 (846)
411 PF13360 PQQ_2: PQQ-like domai 98.1 0.00065 1.4E-08 79.5 25.5 228 539-799 2-234 (238)
412 KOG1920|consensus 98.1 0.0029 6.3E-08 83.9 32.5 252 518-794 68-364 (1265)
413 PF00400 WD40: WD domain, G-be 98.1 1.1E-05 2.3E-10 65.6 6.7 38 467-504 2-39 (39)
414 PF00400 WD40: WD domain, G-be 98.1 1E-05 2.2E-10 65.8 6.5 39 508-546 1-39 (39)
415 KOG1645|consensus 98.1 7.9E-05 1.7E-09 87.3 16.0 263 542-844 175-461 (463)
416 KOG3617|consensus 98.1 0.00014 3E-09 91.2 18.8 322 480-834 19-375 (1416)
417 KOG2695|consensus 98.1 6.8E-06 1.5E-10 94.0 7.1 128 475-605 251-387 (425)
418 KOG2695|consensus 98.0 8.5E-06 1.8E-10 93.3 7.7 152 634-806 228-385 (425)
419 PF00930 DPPIV_N: Dipeptidyl p 98.0 0.0017 3.7E-08 81.0 28.7 301 485-834 1-347 (353)
420 KOG2066|consensus 98.0 0.00022 4.8E-09 90.3 19.7 189 519-752 40-233 (846)
421 PF06433 Me-amine-dh_H: Methyl 98.0 0.0022 4.7E-08 76.4 26.7 280 498-806 17-329 (342)
422 KOG4649|consensus 98.0 0.0087 1.9E-07 67.0 29.3 104 487-594 62-165 (354)
423 PRK02888 nitrous-oxide reducta 98.0 0.0022 4.8E-08 81.8 27.8 227 529-796 140-405 (635)
424 PF11768 DUF3312: Protein of u 97.9 0.015 3.3E-07 72.8 33.3 76 762-847 257-332 (545)
425 KOG3621|consensus 97.8 0.002 4.3E-08 81.1 23.6 146 517-672 32-179 (726)
426 KOG1008|consensus 97.8 1.2E-05 2.7E-10 98.5 4.4 201 476-694 56-276 (783)
427 KOG3621|consensus 97.8 0.0019 4E-08 81.4 23.2 117 475-595 32-155 (726)
428 PF07433 DUF1513: Protein of u 97.8 0.008 1.7E-07 71.0 26.8 248 564-842 8-283 (305)
429 KOG1897|consensus 97.8 0.064 1.4E-06 70.4 36.6 343 476-845 487-899 (1096)
430 PF11768 DUF3312: Protein of u 97.8 0.011 2.3E-07 74.1 29.0 76 616-696 257-332 (545)
431 PF04841 Vps16_N: Vps16, N-ter 97.7 0.016 3.5E-07 73.4 30.4 252 541-854 62-324 (410)
432 PF08596 Lgl_C: Lethal giant l 97.7 0.00091 2E-08 83.5 18.7 307 478-843 3-334 (395)
433 KOG3617|consensus 97.7 0.00067 1.4E-08 85.3 17.0 109 564-693 19-131 (1416)
434 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.6 0.084 1.8E-06 69.2 34.8 308 488-806 69-499 (527)
435 PF06433 Me-amine-dh_H: Methyl 97.6 0.049 1.1E-06 65.2 29.1 249 482-762 41-330 (342)
436 cd00216 PQQ_DH Dehydrogenases 97.5 0.026 5.6E-07 73.6 28.7 294 530-852 61-432 (488)
437 PRK02888 nitrous-oxide reducta 97.5 0.024 5.1E-07 72.8 26.7 240 575-845 140-405 (635)
438 KOG1008|consensus 97.5 5E-05 1.1E-09 93.4 2.7 210 619-845 57-276 (783)
439 PF14583 Pectate_lyase22: Olig 97.4 0.16 3.5E-06 62.0 30.7 303 504-842 16-379 (386)
440 PF14583 Pectate_lyase22: Olig 97.4 0.087 1.9E-06 64.3 28.2 275 483-794 42-380 (386)
441 PF04841 Vps16_N: Vps16, N-ter 97.3 0.19 4E-06 63.9 32.1 197 482-695 34-248 (410)
442 KOG1897|consensus 97.3 0.39 8.5E-06 63.4 34.2 322 484-844 265-613 (1096)
443 COG3391 Uncharacterized conser 97.3 0.24 5.2E-06 62.5 31.9 266 500-799 13-287 (381)
444 KOG2276|consensus 97.2 9E-05 2E-09 87.3 0.7 76 871-956 95-184 (473)
445 PF00780 CNH: CNH domain; Int 97.2 0.096 2.1E-06 62.9 26.6 238 486-764 5-267 (275)
446 PF14655 RAB3GAP2_N: Rab3 GTPa 97.2 0.049 1.1E-06 68.0 23.9 89 481-570 6-118 (415)
447 PF04053 Coatomer_WDAD: Coatom 97.2 0.13 2.8E-06 65.4 27.8 235 514-796 28-263 (443)
448 PF03178 CPSF_A: CPSF A subuni 97.2 0.034 7.4E-07 68.5 22.4 176 498-693 2-202 (321)
449 PF00780 CNH: CNH domain; Int 97.2 0.25 5.5E-06 59.3 29.5 251 528-806 5-264 (275)
450 PF08596 Lgl_C: Lethal giant l 97.1 0.068 1.5E-06 67.0 24.6 232 620-869 3-325 (395)
451 COG3490 Uncharacterized protei 97.1 0.082 1.8E-06 60.5 21.8 250 564-842 71-346 (366)
452 KOG2079|consensus 97.1 0.0077 1.7E-07 79.0 15.7 104 488-594 99-203 (1206)
453 PF02897 Peptidase_S9_N: Proly 97.0 0.3 6.4E-06 62.5 30.3 250 521-799 126-408 (414)
454 KOG2079|consensus 97.0 0.0078 1.7E-07 79.0 15.0 101 577-693 100-203 (1206)
455 PF06977 SdiA-regulated: SdiA- 97.0 0.11 2.4E-06 60.7 23.2 211 555-791 16-246 (248)
456 PF06977 SdiA-regulated: SdiA- 97.0 0.077 1.7E-06 62.1 21.7 212 469-689 14-246 (248)
457 PF04053 Coatomer_WDAD: Coatom 96.9 0.071 1.5E-06 67.8 22.6 224 558-846 30-264 (443)
458 PF08553 VID27: VID27 cytoplas 96.9 0.077 1.7E-06 70.8 23.4 150 529-692 492-646 (794)
459 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.9 0.68 1.5E-05 60.8 32.1 68 530-603 69-147 (527)
460 PF00930 DPPIV_N: Dipeptidyl p 96.9 0.25 5.5E-06 61.7 27.2 266 476-783 42-345 (353)
461 COG3391 Uncharacterized conser 96.9 0.38 8.3E-06 60.7 28.8 264 478-774 32-308 (381)
462 PF02897 Peptidase_S9_N: Proly 96.8 0.59 1.3E-05 59.8 30.2 246 478-757 125-409 (414)
463 TIGR03074 PQQ_membr_DH membran 96.8 2.6 5.7E-05 57.3 36.6 206 488-699 194-483 (764)
464 PF03178 CPSF_A: CPSF A subuni 96.8 0.17 3.7E-06 62.3 24.0 222 587-841 3-262 (321)
465 KOG4640|consensus 96.7 0.0064 1.4E-07 75.9 9.8 93 477-570 21-115 (665)
466 COG0823 TolB Periplasmic compo 96.6 0.13 2.9E-06 65.1 20.9 168 508-696 182-361 (425)
467 COG0823 TolB Periplasmic compo 96.5 0.39 8.4E-06 61.0 24.5 202 541-783 174-387 (425)
468 PF14783 BBS2_Mid: Ciliary BBS 96.5 0.13 2.8E-06 51.6 15.6 104 479-589 2-109 (111)
469 COG5276 Uncharacterized conser 96.4 2.9 6.3E-05 48.6 27.7 312 490-845 18-370 (370)
470 smart00320 WD40 WD40 repeats. 96.4 0.0077 1.7E-07 46.8 5.6 39 508-546 2-40 (40)
471 PF08553 VID27: VID27 cytoplas 96.3 0.051 1.1E-06 72.4 15.9 135 495-647 501-646 (794)
472 smart00320 WD40 WD40 repeats. 96.3 0.0079 1.7E-07 46.7 5.4 37 468-504 4-40 (40)
473 KOG3630|consensus 96.2 0.044 9.5E-07 72.5 14.0 147 519-681 101-261 (1405)
474 COG3204 Uncharacterized protei 96.1 0.91 2E-05 53.0 22.2 176 514-695 81-265 (316)
475 KOG2444|consensus 96.0 0.0067 1.5E-07 67.5 4.6 144 632-796 32-178 (238)
476 PF14727 PHTB1_N: PTHB1 N-term 96.0 6.8 0.00015 49.5 33.1 306 530-850 37-366 (418)
477 PF05694 SBP56: 56kDa selenium 96.0 1.4 3E-05 54.6 24.3 241 487-741 86-393 (461)
478 COG3386 Gluconolactonase [Carb 95.9 1.3 2.7E-05 53.9 23.6 231 525-783 31-273 (307)
479 PF14783 BBS2_Mid: Ciliary BBS 95.9 0.27 5.9E-06 49.4 14.6 105 562-688 1-109 (111)
480 PF07995 GSDH: Glucose / Sorbo 95.8 2.8 6.1E-05 51.8 26.8 79 757-839 246-330 (331)
481 TIGR03118 PEPCTERM_chp_1 conse 95.8 1.7 3.6E-05 51.2 22.3 219 477-699 23-285 (336)
482 PRK10115 protease 2; Provision 95.7 11 0.00023 51.6 33.7 113 477-594 127-255 (686)
483 PF05694 SBP56: 56kDa selenium 95.6 1 2.2E-05 55.6 21.0 200 482-682 135-392 (461)
484 PF14655 RAB3GAP2_N: Rab3 GTPa 95.5 2.2 4.8E-05 53.6 24.1 72 523-594 6-97 (415)
485 PRK13616 lipoprotein LpqB; Pro 95.4 0.7 1.5E-05 61.2 20.4 194 474-688 347-563 (591)
486 PHA02713 hypothetical protein; 95.4 0.39 8.4E-06 63.6 18.2 194 487-700 303-540 (557)
487 KOG2444|consensus 95.3 0.023 4.9E-07 63.4 5.4 142 532-694 32-178 (238)
488 COG3204 Uncharacterized protei 95.3 1.7 3.7E-05 50.8 20.4 186 458-649 67-264 (316)
489 PRK13616 lipoprotein LpqB; Pro 95.2 1.6 3.6E-05 57.8 22.9 165 516-693 347-525 (591)
490 KOG2395|consensus 95.2 0.58 1.3E-05 58.0 16.8 141 578-751 348-499 (644)
491 KOG2395|consensus 95.1 0.46 1E-05 58.8 15.9 149 532-692 348-499 (644)
492 COG3386 Gluconolactonase [Carb 95.1 2.3 5.1E-05 51.6 22.1 103 722-833 163-274 (307)
493 PHA02713 hypothetical protein; 95.0 1.1 2.4E-05 59.5 20.8 226 499-764 273-545 (557)
494 KOG4499|consensus 95.0 2.6 5.7E-05 47.4 19.7 148 619-782 109-271 (310)
495 KOG4441|consensus 95.0 1.7 3.8E-05 57.5 22.2 224 454-700 301-553 (571)
496 TIGR03118 PEPCTERM_chp_1 conse 94.9 4.3 9.3E-05 47.9 22.2 228 619-868 23-298 (336)
497 PF14870 PSII_BNR: Photosynthe 94.8 8.5 0.00018 46.6 25.5 162 514-690 140-301 (302)
498 cd05493 Bromo_ALL-1 Bromodomai 94.8 0.036 7.7E-07 57.1 4.6 68 1572-1640 59-126 (131)
499 KOG4640|consensus 94.7 0.12 2.6E-06 65.0 9.9 96 720-824 19-115 (665)
500 COG3490 Uncharacterized protei 94.6 12 0.00025 43.8 24.2 241 523-794 72-347 (366)
No 1
>KOG0644|consensus
Probab=100.00 E-value=3.6e-121 Score=1091.90 Aligned_cols=1002 Identities=30% Similarity=0.495 Sum_probs=788.8
Q ss_pred cccHHHHHHHHHHhccCChHHHHHHHHHHHHhcCcCcccc-cccCccccccHHHHHhcCCCCCCChHHHHHHHhCCCccc
Q psy9598 304 RLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERY-DWEGATHSQTLAEVASSHPNVTASFLPKICQRLGPLLDK 382 (1915)
Q Consensus 304 ~l~~e~~~li~~~L~~~~~~~aa~~L~~e~~~~~llp~r~-~~~g~~~~~~~~~l~~~~~~i~~~~L~~l~~~l~pll~~ 382 (1915)
....|++++|+++|..|||.+|+++|+.|++++.|||.|+ +|.++++....+.|+..|+||.++||++||++|++.+++
T Consensus 13 l~lsevyflil~~lS~gPcert~~vl~~elee~~ll~pr~~~W~sn~~~dd~eslvls~~hI~kdhll~i~kqlv~~~d~ 92 (1113)
T KOG0644|consen 13 LDLSEVYFLILHYLSAGPCERTAQVLRQELEEYSLLPPRYHDWESNSGNDDGESLVLSYKHIAKDHLLQILKQLVPMLDK 92 (1113)
T ss_pred cchhhHHHHHHhhcccCchhhcchhhhhhhhhhhccCccccccccCCCCcccceeeccccccchHHHHHHHHHhccCcCC
Confidence 3456999999999999999999999999999998876665 699999999999999999999999999999999999999
Q ss_pred ccCCC---CCCcceecccCccccccchhhhccccccchhHHHhcCCCcccccC-ccCccchhhcccCccccccCCCeEEE
Q psy9598 383 ELKPN---FPGLKSLLSGGSQSLLRSEKSLAKSVLSSYDYIARQHGTSLLVPN-SVKVHNTVNVLRSREYSGPLSRSLMI 458 (1915)
Q Consensus 383 ~~~~~---~~~~~tll~~g~~sll~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~v~~l~~r~~tg~~d~~~~i 458 (1915)
..|+. +.+++||||.|+|+|++..+.|...+|+++.+...|.+.+..++. .....+.+.+..+....++...++..
T Consensus 93 ~~pp~~~~~a~vpTlLgtg~qsLl~r~k~~~~~~~~~s~~~~~h~~~~~~~~~sl~s~~~~~~~h~~a~~i~~at~~~ak 172 (1113)
T KOG0644|consen 93 PIPPRYCTIARVPTLLGTGRQSLLRRAKDIRHTVWKGSAFRWPHMHADQVRGVSLRSIGGGFEIHHRAPSIGCATFSIAK 172 (1113)
T ss_pred CCCcceeeeecccchhcchhHHHHhhhhhcccccccccccccccccCcccccceeccCCcchhhhhcCcccccceeeecC
Confidence 99987 788999999999999999999999999999999999998988887 55667788888888888999999999
Q ss_pred ecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC
Q psy9598 459 SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538 (1915)
Q Consensus 459 ~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~ 538 (1915)
+...+++++.++.|.||.++|+|++|+..|.+|+||++|..|+||+..++.++.+++||.+.|+.++.+.++.++|++|.
T Consensus 173 Pgtmvqkmk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~ 252 (1113)
T KOG0644|consen 173 PGTMVQKMKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASN 252 (1113)
T ss_pred cHHHHHHHHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCC
Q psy9598 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618 (1915)
Q Consensus 539 DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1915)
|..|+||.+.++.++.++.||++.|++|+|+|. .+.+.||++++||.+-.. ......|..+.. .
T Consensus 253 D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~--------~sss~dgt~~~wd~r~~~---~~y~prp~~~~~-----~ 316 (1113)
T KOG0644|consen 253 DKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPR--------ASSSDDGTCRIWDARLEP---RIYVPRPLKFTE-----K 316 (1113)
T ss_pred CceEEEEecCCCchHHHHhccccceeeeccCcc--------ccCCCCCceEeccccccc---cccCCCCCCccc-----c
Confidence 999999999999999999999999999999993 378899999999987211 111111111110 0
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceE
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~ 698 (1915)
..+.++.|..++..++||+.|+....|.+....|.
T Consensus 317 ---------------------------------------------~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~ 351 (1113)
T KOG0644|consen 317 ---------------------------------------------DLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWR 351 (1113)
T ss_pred ---------------------------------------------cceeeeeccccccccccccCCcccccchhhHhhhh
Confidence 22344455556666677777777666655433322
Q ss_pred EeeecccccCCCCccccccccccccEEEEEECCCC-CEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCC
Q psy9598 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD-RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777 (1915)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg-~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg 777 (1915)
.. .+..+.++.+- .+.+++-. +..+++|++.+|.+++.+.+|...++.+.+||++.
T Consensus 352 ~~----------------------~lif~t~ssd~~~~~~~ar~-~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ 408 (1113)
T KOG0644|consen 352 SN----------------------LLIFVTRSSDLSSIVVTARN-DHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNP 408 (1113)
T ss_pred cc----------------------ceEEEeccccccccceeeee-eeEeeeeecccchhhhhhcccccceeeeeecCCCc
Confidence 11 11112222121 34455555 88999999999999999999999999999999999
Q ss_pred CEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCCCcee
Q psy9598 778 RVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELF 857 (1915)
Q Consensus 778 ~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~~~~ 857 (1915)
.+..++|.||.+.|||+..|.+ ++.+. .+++.+.+.+||+||..+++.+..|+++|++.+.++.....+.++|
T Consensus 409 ri~msag~dgst~iwdi~eg~p--ik~y~-----~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s~k~ak~dqf 481 (1113)
T KOG0644|consen 409 RIAMSAGYDGSTIIWDIWEGIP--IKHYF-----IGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKSQKKAKYDQF 481 (1113)
T ss_pred HhhhhccCCCceEeeecccCCc--ceeee-----cccceeeccccCCCCceEecCCCCCceEEeccCCCccccccccceE
Confidence 9999999999999999999988 66665 3478899999999999999999999999999999999999999999
Q ss_pred ecCCCCeeeecCCCccceeecccCCCCCcCCCCcccCCCCCCCCCCCcccccCCCCCCCCCcccccccCCCCCceeeecc
Q psy9598 858 FHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGS 937 (1915)
Q Consensus 858 F~~d~~~Lv~~~~~~~~v~D~~t~~~p~~~~~pfl~~~~G~~ypp~~Q~lv~GR~~s~~~~L~~~~~~~~d~~~~~ieg~ 937 (1915)
|+.|+++|+++.+++ |+|.+|++.||.++++|+|+.+++|||..+|+|++||..+..+++.|++++.+.-.-+.++..
T Consensus 482 fl~dyrplirdTn~~--vldqeTq~~ph~~~p~~l~ds~~iphpe~yqtl~q~rr~sa~dh~mp~l~fia~~~~E~e~~V 559 (1113)
T KOG0644|consen 482 FLGDYRPLIRDTNGY--VLDQETQLAPHRNPPDFLCDSDMIPHPEPYQTLFQGRRLSALDHLMPPLEFIATMDWEPEEQV 559 (1113)
T ss_pred eecCcccccccccch--hhhhHhhhccccCCCCceeccCCCcCCchhhhcccccccchhhhcCCcccchhhhccccchhh
Confidence 999999999999999 999999999999999999999999999999999999999999999999977654222222221
Q ss_pred c------------ccCC---CchhhccccccCCCC-Ccc---------------cccc--cccccccCCCCCC-CcccCC
Q psy9598 938 E------------RNGE---RPVEVEGQRHYNDHG-HVY---------------IQTS--HVHVLRSRANGES-SAATEG 983 (1915)
Q Consensus 938 e------------e~gs---~~~~~~~~~~~~~~g-~~~---------------~~~~--~~~~~~~~~~~rr-~g~~~g 983 (1915)
. |..| .+....-+.+...+| .+. ++.- ..+...+..+.++ +|+++|
T Consensus 560 ls~~nds~~~~~~es~seldg~isq~krt~n~r~g~k~s~~~hg~s~ss~~~R~~~Rn~~~~isk~sg~~~~~~sg~~e~ 639 (1113)
T KOG0644|consen 560 LSDQNDSEYNRSPESLSELDGMISQLKRTQNQRMGAKQSKRKHGLSKSSRPPRAAARNASSDISKISGISLDRKSGQVEG 639 (1113)
T ss_pred hhhcccccccCCcccchhhhhhhhhhhhhhccccccchhhccCCCCccccCCcccccccchhhccCCCccccccccCCcc
Confidence 1 1101 111222222222222 111 0110 2255567788888 999999
Q ss_pred CCCCCCCC-----------ccccccccccC-CCchhHHHHH--HHHhhhhhhhhhhHHhhcccCCC----CCCcCc--cc
Q psy9598 984 TSPSGTAP-----------TAQNKNFVKRL-PLSQHKIVVE--RINAFAEIESEEFIKESKKLFDS----STTTQP--LV 1043 (1915)
Q Consensus 984 v~~~~~n~-----------~aw~~r~~~~~-~~~~~~~~~~--~~~~~~~~e~~~~~~e~~~~~~~----~~~~~~--~~ 1043 (1915)
+.|+++|+ .+|+++++|.+ ..+.....++ ....+++.+.+.|..-+|+++.. +..++. .+
T Consensus 640 ~~q~~~~~p~eq~~~~~~~~~wR~e~~vce~legt~pe~ed~~~~~dtdev~rng~kngRKrk~~l~~~~Snksd~vtlV 719 (1113)
T KOG0644|consen 640 VTQMHQNAPSEQIATLRTLQAWRREVVVCEELEGTFPELEDEAMAVDTDEVERNGYKNGRKRKLELRHPLSNKSDSVTLV 719 (1113)
T ss_pred chhhccCCCHHHHhhhhHHHHhhcccCccccccccCccccccccccccchhhhcCCCcccccchhccCccccccccchhh
Confidence 99999877 59999999999 7777777776 55567788888998888888553 222211 11
Q ss_pred cccc-cccccccCCCchhhhhcccccCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCccccccc-CCC
Q psy9598 1044 VKKE-KKKKVVRQARTRAEYSEHIQDQYEDPDNLSLSGSEESASDSDQSQVDVSDLCESSSSSGGTSSSDYSDWIH-EGV 1121 (1915)
Q Consensus 1044 ~~~~-r~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sd~~~-~g~ 1121 (1915)
.... -++.+.+.++.+-.+. .++..+..--+.+.+.++..-...+.++.......+...++++.||-|++|++ .++
T Consensus 720 ~~d~~~~~~~~s~aP~~~ld~--lNDgfsD~kiD~t~D~se~~gs~~Eis~Rndrr~eS~~~esds~SSa~sv~l~dgsi 797 (1113)
T KOG0644|consen 720 SQDLADQSTCVSRAPNGGLDS--LNDGFSDVKIDLTLDCSEDSGSGEEISLRNDRRSESNPEESDSLSSAYSVWLADGSI 797 (1113)
T ss_pred hhhhhcccceeeeCCcccccc--cccccccccccchhhhhhcCCcccceeeecchhhccCcccccchhhhhheecccCCc
Confidence 1000 1222322222211111 11111111000011111110111223444444445555667788999999999 999
Q ss_pred CCCCCcccc-cccccC------------CCc--CCCC-CC--------CCCCCCCCCcCCCCccccccCCCC-CCCCCCC
Q psy9598 1122 NLEPPKRVR-RHTKVK------------PIQ--VSLP-KQ--------LIPEEVPDIYKPSDWLAEVVPKKA-PYYPQMG 1176 (1915)
Q Consensus 1122 ~~~~p~r~~-r~~~~~------------~~~--~~~~-~~--------~~~~~~~~~~~~~~w~~~~~~~~~-p~~pq~g 1176 (1915)
|++-.+|++ +|-..+ ++. .++. ++ ..+-..-+.+.+++||+.++-+.+ |||||||
T Consensus 798 ~~~tsrrgRi~k~~~st~a~Lt~e~~~~p~~~~~~s~s~s~~~~~p~~~~~~~~~~~~~~~sWltls~hee~~ryipQmg 877 (1113)
T KOG0644|consen 798 NLQTSRRGRITKFCSSTEAELTTELSSPPCSQDKGSGSKSHKRSTPAPLENMKPQQLFEKPSWLTLSIHEEGCRYIPQMG 877 (1113)
T ss_pred cccccccccccccCccchhhhhhcccCCCccccccccccCcccCCCccccccchhhhcCCceeEEeehhhcCCccccccc
Confidence 998332211 111100 000 0100 00 011112257899999999887666 9999999
Q ss_pred CeEEEEccchHHHHHHHhhcCccccCcccCCCCccCCCCCCceEEEEEEEEEecCCceEEEEEEEecCCCCcCCcEEEEE
Q psy9598 1177 DEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMKPNGKLTNEFFNIK 1256 (1915)
Q Consensus 1177 d~v~yf~qGh~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~c~v~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~f~v~ 1256 (1915)
|+|+||+|||+|||+|++..++ ..+ ...||+++.+.-+++.|++.|.|..++|++||++|+++|..+.+..++|++.
T Consensus 878 DEViyfrQghqeyl~~~~~n~~-~~~--~~~p~~~~~v~~~kv~kl~~~~y~~~~~s~c~m~l~~idp~s~~~~k~F~lt 954 (1113)
T KOG0644|consen 878 DEVIYFRQGHQEYLEAVRLNNI-ELN--NKEPWNKMAVEICKVEKLVYITYPGSGDSCCKMKLAVIDPASKLMDKSFKLT 954 (1113)
T ss_pred ceeehhhhhhHHHHhhhhhccc-ccc--ccCcccccchhhheeeeeeeeeccCCCcchheeeeeeecchhhhhhccceee
Confidence 9999999999999999999887 555 5899999988888888888888888999999999999998779999999999
Q ss_pred eCCCCCCCcEEEehHhHHHHHcCCCCCCCeEEEEEcCe------eEEEEEeecCC----CCCCCceeeEEEeCCCCCCCc
Q psy9598 1257 YHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA------WWWGTIEGKPS----PTKSPFLGYKILWDNNERENL 1326 (1915)
Q Consensus 1257 y~~~~~~~~f~v~~~~y~~~~~~~~~~g~rf~~~~~~~------~~~G~i~~~~~----~~~s~w~~~~v~wd~~~~~~~ 1326 (1915)
|++|++++||||+|++|++|++|||+.||+||++|+|+ ||+|+|.+++| ||+|||+||.|+|||++.+.+
T Consensus 955 lpdlv~fpDFlV~rsrYd~AiQrnW~~~d~crvwwrda~~e~g~WWeG~ils~~pksp~fpdSpwery~v~~~~~e~~~~ 1034 (1113)
T KOG0644|consen 955 LPDLVTFPDFLVERSRYDAAIQRNWTCRDKCRVWWRDAGEEDGAWWEGRILSVKPKSPDFPDSPWERYIVRYDNTETELH 1034 (1113)
T ss_pred cccccCcchhhhhhhhHHHHHhhccccccceeEEEccCCCcCCceeeeeeeeccCCCCCCCCCcceeEEEEecCCccccc
Confidence 99999999999999999999999999999999999775 99999999998 999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCChHHHHhhccCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcc
Q psy9598 1327 SPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQYPAY 1406 (1915)
Q Consensus 1327 spw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~F~~pv~~~~~p~Y 1406 (1915)
||||++||+.. |
T Consensus 1035 spwe~~~i~de--------------------------------------------------------------------~ 1046 (1113)
T KOG0644|consen 1035 SPWEMEPIPDE--------------------------------------------------------------------V 1046 (1113)
T ss_pred CccccCCCccc--------------------------------------------------------------------c
Confidence 99999998331 2
Q ss_pred ccccCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHHHh
Q psy9598 1407 AYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK 1471 (1915)
Q Consensus 1407 ~~~I~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na~~yN~~~s~i~~~a~~l~~~~~~~~~ 1471 (1915)
..-..-|..|..|+.||+|+|||++++|.+|+..|.+||.+|.+.+--+...+..|..+|.+.+.
T Consensus 1047 ~~~fpvpls~evi~~rlEn~yYrs~e~~~hdvs~mlsnae~~fg~~~~~~~ki~~l~~~~~~Tlp 1111 (1113)
T KOG0644|consen 1047 DNRFPVPLSLEVIRSRLENNYYRSQEALRHDVSVMLSNAETFFGRNKNVAIKISFLSPWFDRTLP 1111 (1113)
T ss_pred CCCCCCcccHHHHHHHHHhhhhhhhHhhhcchhhhhcccceeecccccHHHHhhhcchhhhhhcc
Confidence 22334488899999999999999999999999999999999999999888888888888877653
No 2
>KOG0271|consensus
Probab=100.00 E-value=8.8e-47 Score=421.71 Aligned_cols=333 Identities=28% Similarity=0.452 Sum_probs=295.3
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t 549 (1915)
..+.||.++|.|+.|+|+|..||||+.|.++++||+.|..++++++||...|.|++|+|||..||||+.||+|++||..+
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpkt 188 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKT 188 (480)
T ss_pred cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEE-EeecCCCCeEEEEeccCcc-CCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEEC
Q psy9598 550 LAPIS-VLVGHQGIITGVNFCPLEV-NGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 627 (1915)
Q Consensus 550 g~~~~-~l~~h~~~V~sl~fsp~~~-~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs 627 (1915)
|+++. .|.+|...|++++|.|... ...++|++++.||+|+|||+..+.++..+ .+|...|+|+.|-
T Consensus 189 g~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l------------sgHT~~VTCvrwG 256 (480)
T KOG0271|consen 189 GQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL------------SGHTASVTCVRWG 256 (480)
T ss_pred CCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe------------ccCccceEEEEEc
Confidence 88764 7899999999999998542 24569999999999999999887654333 4678999999998
Q ss_pred CCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEc-----------CCC---------------------
Q psy9598 628 PGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-----------HSH--------------------- 675 (1915)
Q Consensus 628 pdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fs-----------pdg--------------------- 675 (1915)
-+| +|++|+.|++|++|+.. ....+..+.+|...|+.|+++ |.+
T Consensus 257 G~g-liySgS~DrtIkvw~a~---dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~ 332 (480)
T KOG0271|consen 257 GEG-LIYSGSQDRTIKVWRAL---DGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVL 332 (480)
T ss_pred CCc-eEEecCCCceEEEEEcc---chhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhh
Confidence 766 89999999999999983 356677899999999999887 223
Q ss_pred ----CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEEC
Q psy9598 676 ----LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA 751 (1915)
Q Consensus 676 ----~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~ 751 (1915)
..|++|+.|+++.+|+..... .......+|..-|+.+.||||+++|++++- |..|++|+.
T Consensus 333 ~~~~erlVSgsDd~tlflW~p~~~k---------------kpi~rmtgHq~lVn~V~fSPd~r~IASaSF-DkSVkLW~g 396 (480)
T KOG0271|consen 333 KDSGERLVSGSDDFTLFLWNPFKSK---------------KPITRMTGHQALVNHVSFSPDGRYIASASF-DKSVKLWDG 396 (480)
T ss_pred ccCcceeEEecCCceEEEecccccc---------------cchhhhhchhhheeeEEECCCccEEEEeec-ccceeeeeC
Confidence 359999999999999754322 223345678999999999999999999998 999999999
Q ss_pred CCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEE
Q psy9598 752 FNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCAL 831 (1915)
Q Consensus 752 ~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Las 831 (1915)
.+|+.+.+|.||-+.|+.|+|+. |.++|++|+.|.+++||++.+.+. ...+. .|...|+++.|+|||..+++
T Consensus 397 ~tGk~lasfRGHv~~VYqvawsa-DsRLlVS~SkDsTLKvw~V~tkKl--~~DLp-----Gh~DEVf~vDwspDG~rV~s 468 (480)
T KOG0271|consen 397 RTGKFLASFRGHVAAVYQVAWSA-DSRLLVSGSKDSTLKVWDVRTKKL--KQDLP-----GHADEVFAVDWSPDGQRVAS 468 (480)
T ss_pred CCcchhhhhhhccceeEEEEecc-CccEEEEcCCCceEEEEEeeeeee--cccCC-----CCCceEEEEEecCCCceeec
Confidence 99999999999999999999999 999999999999999999998877 44443 56689999999999999999
Q ss_pred EeCCCeEEEEe
Q psy9598 832 TDSYGHLLVYG 842 (1915)
Q Consensus 832 g~~dG~I~Iwd 842 (1915)
|+.|..+++|.
T Consensus 469 ggkdkv~~lw~ 479 (480)
T KOG0271|consen 469 GGKDKVLRLWR 479 (480)
T ss_pred CCCceEEEeec
Confidence 99999999995
No 3
>KOG0271|consensus
Probab=100.00 E-value=1.3e-41 Score=380.32 Aligned_cols=311 Identities=24% Similarity=0.380 Sum_probs=273.8
Q ss_pred cCccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE-EEEeCCCCCEE
Q psy9598 444 RSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL-ATLRGCSGEIS 522 (1915)
Q Consensus 444 ~~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~-~~l~gH~~~I~ 522 (1915)
..+.++|+.|.++++|+.... ..+++..||.+.|.||+|+|||..||+|+.||+|++||..+|+++ ..|.||...|+
T Consensus 127 g~~l~tGsGD~TvR~WD~~Te--Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It 204 (480)
T KOG0271|consen 127 GSRLVTGSGDTTVRLWDLDTE--TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWIT 204 (480)
T ss_pred CceEEecCCCceEEeeccCCC--CcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCccccee
Confidence 357789999999999987655 355688999999999999999999999999999999999999765 57899999999
Q ss_pred EEEEeC-----CCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc
Q psy9598 523 DIAIDN-----RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI 597 (1915)
Q Consensus 523 ~Lafsp-----dg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~ 597 (1915)
+|+|.| ..++||++|.||+|+|||+..+.++..+.||+.+|+||.|- +..+|++||.|++|++|+...+.
T Consensus 205 ~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwG-----G~gliySgS~DrtIkvw~a~dG~ 279 (480)
T KOG0271|consen 205 ALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWG-----GEGLIYSGSQDRTIKVWRALDGK 279 (480)
T ss_pred EEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEc-----CCceEEecCCCceEEEEEccchh
Confidence 999965 57799999999999999999999999999999999999995 34799999999999999998876
Q ss_pred cccceeccCccccccccCCCCCceEEEEEC-----------CCCc-------------------------EEEEEeCCCe
Q psy9598 598 DISKTVFHEPVMFNERIRPGNAHILCSSFS-----------PGGL-------------------------FLATGSGDHH 641 (1915)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs-----------pdg~-------------------------~Lasgs~Dg~ 641 (1915)
+...+. +|...|+.++.+ |.|. .|++|+.|++
T Consensus 280 ~~r~lk------------GHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~t 347 (480)
T KOG0271|consen 280 LCRELK------------GHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFT 347 (480)
T ss_pred HHHhhc------------ccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCce
Confidence 554443 344455555444 3333 4999999999
Q ss_pred EEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccccc
Q psy9598 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721 (1915)
Q Consensus 642 I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1915)
+.+|+.. .....+..+.+|..-|+.+.||||+.+++++|-|..|++|+.++++.+ ..+.+|-
T Consensus 348 lflW~p~--~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~l----------------asfRGHv 409 (480)
T KOG0271|consen 348 LFLWNPF--KSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFL----------------ASFRGHV 409 (480)
T ss_pred EEEeccc--ccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchh----------------hhhhhcc
Confidence 9999974 344566778999999999999999999999999999999999998833 2355688
Q ss_pred ccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEE
Q psy9598 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793 (1915)
Q Consensus 722 ~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWd 793 (1915)
..|..++|+.|.++|++++. |.+++||++++.++..-|.||...|+++.|+| ||..+++||.|..+++|.
T Consensus 410 ~~VYqvawsaDsRLlVS~Sk-DsTLKvw~V~tkKl~~DLpGh~DEVf~vDwsp-DG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 410 AAVYQVAWSADSRLLVSGSK-DSTLKVWDVRTKKLKQDLPGHADEVFAVDWSP-DGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ceeEEEEeccCccEEEEcCC-CceEEEEEeeeeeecccCCCCCceEEEEEecC-CCceeecCCCceEEEeec
Confidence 99999999999999999988 99999999999999999999999999999999 999999999999999994
No 4
>KOG0272|consensus
Probab=100.00 E-value=2.4e-39 Score=368.10 Aligned_cols=286 Identities=23% Similarity=0.422 Sum_probs=262.9
Q ss_pred EecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCC--CCEEEEEeCCCcEEEEECC
Q psy9598 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR--NILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspd--g~~LaSgs~DgtIrVWDl~ 548 (1915)
.-.|-+.+|..+.||+++..|||||.+|.++||+..++..+.+|.||.+.|.++.|+|. +..||||+.||+|++|++.
T Consensus 170 SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~ 249 (459)
T KOG0272|consen 170 SQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLS 249 (459)
T ss_pred hhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccC
Confidence 34477899999999999999999999999999999999999999999999999999997 6689999999999999999
Q ss_pred CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECC
Q psy9598 549 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP 628 (1915)
Q Consensus 549 tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp 628 (1915)
+..++..|.+|...|..++|+|+ |++|+|+|.|.+-++||+.++..+... .+|...|.+++|.+
T Consensus 250 ~e~~l~~l~gH~~RVs~VafHPs----G~~L~TasfD~tWRlWD~~tk~ElL~Q------------EGHs~~v~~iaf~~ 313 (459)
T KOG0272|consen 250 QETPLQDLEGHLARVSRVAFHPS----GKFLGTASFDSTWRLWDLETKSELLLQ------------EGHSKGVFSIAFQP 313 (459)
T ss_pred CCcchhhhhcchhhheeeeecCC----CceeeecccccchhhcccccchhhHhh------------cccccccceeEecC
Confidence 99999999999999999999995 599999999999999999998643322 36778999999999
Q ss_pred CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccC
Q psy9598 629 GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708 (1915)
Q Consensus 629 dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~ 708 (1915)
||.++++||.|..-+|||+ .+..++..+.+|...|.+|+|+|+|..|+|||.|++++|||++.....+
T Consensus 314 DGSL~~tGGlD~~~RvWDl---Rtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly--------- 381 (459)
T KOG0272|consen 314 DGSLAATGGLDSLGRVWDL---RTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELY--------- 381 (459)
T ss_pred CCceeeccCccchhheeec---ccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccce---------
Confidence 9999999999999999999 4567888999999999999999999999999999999999999776432
Q ss_pred CCCccccccccccccEEEEEECC-CCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCc
Q psy9598 709 PHTKETSDETNKKIKVTMVAWDA-SDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG 787 (1915)
Q Consensus 709 ~~~~~~~~~~~~~~~V~~va~sp-dg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG 787 (1915)
....|..-|+.|.|+| .|.+|++++. |++++||...++.++.++.||.+.|.++.+++ ++.+|+|++.|.
T Consensus 382 -------~ipAH~nlVS~Vk~~p~~g~fL~Tasy-D~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~-d~~~i~t~s~DR 452 (459)
T KOG0272|consen 382 -------TIPAHSNLVSQVKYSPQEGYFLVTASY-DNTVKIWSTRTWSPLKSLAGHEGKVISLDISP-DSQAIATSSFDR 452 (459)
T ss_pred -------ecccccchhhheEecccCCeEEEEccc-CcceeeecCCCcccchhhcCCccceEEEEecc-CCceEEEeccCc
Confidence 2345888999999998 6778888887 99999999999999999999999999999999 999999999999
Q ss_pred eEEEEE
Q psy9598 788 LIIIWD 793 (1915)
Q Consensus 788 ~I~IWd 793 (1915)
+|++|.
T Consensus 453 T~KLW~ 458 (459)
T KOG0272|consen 453 TIKLWR 458 (459)
T ss_pred eeeecc
Confidence 999995
No 5
>KOG0273|consensus
Probab=100.00 E-value=1e-37 Score=358.56 Aligned_cols=327 Identities=25% Similarity=0.411 Sum_probs=275.3
Q ss_pred EecCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCC--CcE--EEEEe------CC----CCCEEEEEEeCCCCEEEE
Q psy9598 471 VNLGHLSAVFCVLFDKLGE-VIVTGADDLLIKLWRARD--GKL--LATLR------GC----SGEISDIAIDNRNILLAA 535 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg~-~LaTGs~Dg~I~IWd~~t--g~~--~~~l~------gH----~~~I~~Lafspdg~~LaS 535 (1915)
++..|.+.|++++|+|-.. +|++|+.|.+.++|++.. ..+ ...|+ ++ ...|++|+|+.+|.+||+
T Consensus 173 kvl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 173 KVLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred eeccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 4445999999999999766 999999999999999874 111 11111 22 357999999999999999
Q ss_pred EeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccC
Q psy9598 536 GTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 615 (1915)
Q Consensus 536 gs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~ 615 (1915)
|+.||.++||+.. |..+.+|..|.++|.+|.|+- .+.+|++++-||++.+||..++.....+.++
T Consensus 253 G~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk----~G~yilS~~vD~ttilwd~~~g~~~q~f~~~---------- 317 (524)
T KOG0273|consen 253 GSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNK----KGTYILSGGVDGTTILWDAHTGTVKQQFEFH---------- 317 (524)
T ss_pred eecCcEEEEEecC-chhhhhhhccCCceEEEEEcC----CCCEEEeccCCccEEEEeccCceEEEeeeec----------
Confidence 9999999999975 778889999999999999997 4599999999999999999988776666655
Q ss_pred CCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy9598 616 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 616 ~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~ 695 (1915)
......+.|-.+. .+++++.||.|+|+.+. ....+.++.+|.+.|.+|.|.|.|.+|+++|.|++++||.+...
T Consensus 318 --s~~~lDVdW~~~~-~F~ts~td~~i~V~kv~---~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~ 391 (524)
T KOG0273|consen 318 --SAPALDVDWQSND-EFATSSTDGCIHVCKVG---EDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS 391 (524)
T ss_pred --cCCccceEEecCc-eEeecCCCceEEEEEec---CCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC
Confidence 2233556665444 68899999999999993 33456678899999999999999999999999999999987655
Q ss_pred ceEEeeecccccCCCCccccccccccccEEEEEECCCC---------CEEEEEEecCCeEEEEECCCCceEEEeeCCCCC
Q psy9598 696 QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD---------RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNE 766 (1915)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg---------~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~ 766 (1915)
.+. ..+..|...|..+.|+|.| ..|++++. |++|++||+..|.++++|..|..+
T Consensus 392 ~~~----------------~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~-dstV~lwdv~~gv~i~~f~kH~~p 454 (524)
T KOG0273|consen 392 NSV----------------HDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASF-DSTVKLWDVESGVPIHTLMKHQEP 454 (524)
T ss_pred cch----------------hhhhhhccceeeEeecCCCCccCCCcCCceEEEeec-CCeEEEEEccCCceeEeeccCCCc
Confidence 422 2344577889999999875 35666666 999999999999999999999999
Q ss_pred eEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9598 767 VFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 767 V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
|++|+|+| ++.+||+|+.||.|.||++.+++. .+.+. +.+.|+.++|+.+|..|..+-+||.+.+.|+.
T Consensus 455 VysvafS~-~g~ylAsGs~dg~V~iws~~~~~l--~~s~~------~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 455 VYSVAFSP-NGRYLASGSLDGCVHIWSTKTGKL--VKSYQ------GTGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred eEEEEecC-CCcEEEecCCCCeeEeccccchhe--eEeec------CCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 99999999 999999999999999999999988 55554 66789999999999999999999999998863
No 6
>KOG0286|consensus
Probab=100.00 E-value=1.5e-36 Score=331.02 Aligned_cols=292 Identities=22% Similarity=0.362 Sum_probs=265.8
Q ss_pred eeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy9598 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIW 545 (1915)
Q Consensus 466 ~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVW 545 (1915)
++..++|.||.+.|+|+.|++|.++|+++|.||.+.|||..|....+.+.-....|..++|+|.|+++|+|+.|+...||
T Consensus 45 ~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy 124 (343)
T KOG0286|consen 45 MRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIY 124 (343)
T ss_pred eeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEE
Confidence 45568999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred ECCCC------ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 546 NLQTL------APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 546 Dl~tg------~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
++.+. .....+.+|++.+.|+.|.++ ..|+++|.|.++.+||+.+++.+.. +.+|.+
T Consensus 125 ~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-----~~ilT~SGD~TCalWDie~g~~~~~------------f~GH~g 187 (343)
T KOG0286|consen 125 PLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-----NHILTGSGDMTCALWDIETGQQTQV------------FHGHTG 187 (343)
T ss_pred ecccccccccceeeeeecCccceeEEEEEcCC-----CceEecCCCceEEEEEcccceEEEE------------ecCCcc
Confidence 99854 345678899999999999874 6899999999999999999864332 347889
Q ss_pred ceEEEEECC-CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceE
Q psy9598 620 HILCSSFSP-GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698 (1915)
Q Consensus 620 ~V~~l~fsp-dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~ 698 (1915)
.|.+++++| +++.+++|+-|+..+|||++ ...++..+.+|...|++|+|.|+|.-|++|+.|+++++||++..+.+
T Consensus 188 DV~slsl~p~~~ntFvSg~cD~~aklWD~R---~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~ 264 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSGGCDKSAKLWDVR---SGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL 264 (343)
T ss_pred cEEEEecCCCCCCeEEecccccceeeeecc---CcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE
Confidence 999999999 99999999999999999994 45788899999999999999999999999999999999999988755
Q ss_pred EeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCC
Q psy9598 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR 778 (1915)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~ 778 (1915)
.... ......+|++++||..|++|++|.. |.++.|||.-.++.+..|.||.+.|.+|..+| ||.
T Consensus 265 a~ys--------------~~~~~~gitSv~FS~SGRlLfagy~-d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~-DG~ 328 (343)
T KOG0286|consen 265 AVYS--------------HDSIICGITSVAFSKSGRLLFAGYD-DFTCNVWDTLKGERVGVLAGHENRVSCLGVSP-DGM 328 (343)
T ss_pred eeec--------------cCcccCCceeEEEcccccEEEeeec-CCceeEeeccccceEEEeeccCCeeEEEEECC-CCc
Confidence 4332 2234578999999999999999988 99999999999999999999999999999999 999
Q ss_pred EEEEEecCceEEEEE
Q psy9598 779 VLLSAGHDGLIIIWD 793 (1915)
Q Consensus 779 ~LaSgs~DG~I~IWd 793 (1915)
.|+||+.|.+|+||.
T Consensus 329 av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 329 AVATGSWDSTLRIWA 343 (343)
T ss_pred EEEecchhHheeecC
Confidence 999999999999994
No 7
>KOG0291|consensus
Probab=100.00 E-value=1e-35 Score=357.27 Aligned_cols=409 Identities=21% Similarity=0.284 Sum_probs=330.2
Q ss_pred CccccccCCCeEEEecc------cCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcE--EEEEeC
Q psy9598 445 SREYSGPLSRSLMISSH------KYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL--LATLRG 516 (1915)
Q Consensus 445 ~r~~tg~~d~~~~i~~~------~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~--~~~l~g 516 (1915)
|+.+..+..+-+.+|.. .+..+.++++..||-..|++|.|+.|.++|++||.|.+++||++...+- ...+.|
T Consensus 108 g~~fav~~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~g 187 (893)
T KOG0291|consen 108 GKFFAVGCGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNG 187 (893)
T ss_pred CcEEEEEecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccC
Confidence 44444455556666632 4778899999999999999999999999999999999999999977655 667899
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC-----------------------Cce-----------EEEeecCCCC
Q psy9598 517 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT-----------------------LAP-----------ISVLVGHQGI 562 (1915)
Q Consensus 517 H~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t-----------------------g~~-----------~~~l~~h~~~ 562 (1915)
|.+.|..+-|..+...|++.+.||.|.+|.+.. +.. .+-+......
T Consensus 188 Hkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~k 267 (893)
T KOG0291|consen 188 HKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSK 267 (893)
T ss_pred CCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccc
Confidence 999999999999999999999999999998761 111 1112223368
Q ss_pred eEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceecc-------------------------------Cccccc
Q psy9598 563 ITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH-------------------------------EPVMFN 611 (1915)
Q Consensus 563 V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~-------------------------------~~~~~~ 611 (1915)
|++.+|++. .+.|++|-..|...+|.+..-..+..+... ....+.
T Consensus 268 vtaa~fH~~----t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYV 343 (893)
T KOG0291|consen 268 VTAAAFHKG----TNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYV 343 (893)
T ss_pred eeeeeccCC----ceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeecccee
Confidence 999999984 489999999999888887665443332221 011122
Q ss_pred cccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy9598 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 691 (1915)
Q Consensus 612 ~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWD 691 (1915)
-+..+|...++|++++|||.+||+|+.||.|+|||. ....|+.++..|++.|++++|+..|+.++++|.||+|+.||
T Consensus 344 lKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~---~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwD 420 (893)
T KOG0291|consen 344 LKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNT---QSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWD 420 (893)
T ss_pred eeccccccceeeEEECCCCcEEEeccCCCcEEEEec---cCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeee
Confidence 344578899999999999999999999999999998 56688999999999999999999999999999999999999
Q ss_pred ccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEE
Q psy9598 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE 771 (1915)
Q Consensus 692 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~ 771 (1915)
+.......... ........|++.+|.|..+++|+...-.|+||++.+|+++-.|.||.++|.+++
T Consensus 421 lkRYrNfRTft---------------~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~ 485 (893)
T KOG0291|consen 421 LKRYRNFRTFT---------------SPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLS 485 (893)
T ss_pred ecccceeeeec---------------CCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeE
Confidence 98776544321 123456789999999999999887556899999999999999999999999999
Q ss_pred EccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccccc
Q psy9598 772 SHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQN 851 (1915)
Q Consensus 772 ~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~ 851 (1915)
|+| .+..|+||++|.+|++||+-.... ...++. ....+.+++|+|||.-||+++.||.|.+||...+.....
T Consensus 486 f~~-~~~~LaS~SWDkTVRiW~if~s~~-~vEtl~------i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~ 557 (893)
T KOG0291|consen 486 FSP-DGSLLASGSWDKTVRIWDIFSSSG-TVETLE------IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGS 557 (893)
T ss_pred Ecc-ccCeEEeccccceEEEEEeeccCc-eeeeEe------eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeecc
Confidence 999 999999999999999999976532 022232 446789999999999999999999999999886655433
Q ss_pred CCC--------------------------ceeecCCCCeeeec-CCCccceeecccCCC
Q psy9598 852 IPR--------------------------ELFFHTDYRTLNRP-NGLFEPTYDEVTNLP 883 (1915)
Q Consensus 852 l~~--------------------------~~~F~~d~~~Lv~~-~~~~~~v~D~~t~~~ 883 (1915)
|-+ .+.++.||..++.+ ...++.+||+.++..
T Consensus 558 IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vl 616 (893)
T KOG0291|consen 558 IDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVL 616 (893)
T ss_pred ccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhhe
Confidence 321 57899999988744 456688999877743
No 8
>KOG0272|consensus
Probab=100.00 E-value=2.1e-37 Score=352.30 Aligned_cols=286 Identities=21% Similarity=0.330 Sum_probs=261.4
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEeccc
Q psy9598 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~ 595 (1915)
|-+.+|..+.|+.++..|||||.+|.++||+..++..+.+|.||...|.++.|+|.. ++..|++|+.||+|++|++.+
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~--~~~~lat~s~Dgtvklw~~~~ 250 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVD--SDLNLATASADGTVKLWKLSQ 250 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCC--CccceeeeccCCceeeeccCC
Confidence 456789999999999999999999999999999999999999999999999999953 457999999999999999987
Q ss_pred CccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg 675 (1915)
...+..+ .+|...|..++|+|+|++|++++.|.+-++||+. +...+....||...|.+|+|+++|
T Consensus 251 e~~l~~l------------~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~---tk~ElL~QEGHs~~v~~iaf~~DG 315 (459)
T KOG0272|consen 251 ETPLQDL------------EGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLE---TKSELLLQEGHSKGVFSIAFQPDG 315 (459)
T ss_pred Ccchhhh------------hcchhhheeeeecCCCceeeecccccchhhcccc---cchhhHhhcccccccceeEecCCC
Confidence 6544333 3566889999999999999999999999999994 445566678999999999999999
Q ss_pred CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc
Q psy9598 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD 755 (1915)
Q Consensus 676 ~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~ 755 (1915)
.+++||+.|..-+|||++++.++.+ ..+|...|..|+|+|+|..|++|++ |++++|||++...
T Consensus 316 SL~~tGGlD~~~RvWDlRtgr~im~----------------L~gH~k~I~~V~fsPNGy~lATgs~-Dnt~kVWDLR~r~ 378 (459)
T KOG0272|consen 316 SLAATGGLDSLGRVWDLRTGRCIMF----------------LAGHIKEILSVAFSPNGYHLATGSS-DNTCKVWDLRMRS 378 (459)
T ss_pred ceeeccCccchhheeecccCcEEEE----------------ecccccceeeEeECCCceEEeecCC-CCcEEEeeecccc
Confidence 9999999999999999999987653 3458899999999999999999999 9999999999999
Q ss_pred eEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCC
Q psy9598 756 LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 835 (1915)
Q Consensus 756 ~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~d 835 (1915)
++.++.+|.+-|+.|.|+|..|.+|+|+|.|++++||...+..+ +..+. +|.+.|.++.+++||.+|++++.|
T Consensus 379 ~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~--~ksLa-----GHe~kV~s~Dis~d~~~i~t~s~D 451 (459)
T KOG0272|consen 379 ELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSP--LKSLA-----GHEGKVISLDISPDSQAIATSSFD 451 (459)
T ss_pred cceecccccchhhheEecccCCeEEEEcccCcceeeecCCCccc--chhhc-----CCccceEEEEeccCCceEEEeccC
Confidence 99999999999999999998899999999999999999999988 77766 678999999999999999999999
Q ss_pred CeEEEEe
Q psy9598 836 GHLLVYG 842 (1915)
Q Consensus 836 G~I~Iwd 842 (1915)
.+|++|.
T Consensus 452 RT~KLW~ 458 (459)
T KOG0272|consen 452 RTIKLWR 458 (459)
T ss_pred ceeeecc
Confidence 9999995
No 9
>KOG0319|consensus
Probab=100.00 E-value=1.5e-36 Score=365.50 Aligned_cols=387 Identities=22% Similarity=0.307 Sum_probs=312.2
Q ss_pred ccccccCCCeEEEecccCCceeeeEEecC-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEE
Q psy9598 446 REYSGPLSRSLMISSHKYSNLRQHYVNLG-HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~~~~~~~~~l~g-H~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~L 524 (1915)
..++.+..+-+.+|..... ++++.+.+ |.++|.-++|+|.|.+|++|+.||.|+|||+..+.+.+.|+||.+.|.++
T Consensus 76 ~L~~a~rs~llrv~~L~tg--k~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl 153 (775)
T KOG0319|consen 76 VLVTASRSQLLRVWSLPTG--KLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSL 153 (775)
T ss_pred EEEEeeccceEEEEEcccc--hHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEE
Confidence 3444555556667755444 66677777 99999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCC--EEEEEeCCCcEEEEECCCCc-eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEec--------
Q psy9598 525 AIDNRNI--LLAAGTVDKTIRIWNLQTLA-PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY-------- 593 (1915)
Q Consensus 525 afspdg~--~LaSgs~DgtIrVWDl~tg~-~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl-------- 593 (1915)
.|+|+-. +|++|..|++|++||+.+.. +++++..|...|++++|.+++ ..++++|.|..|.+||+
T Consensus 154 ~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~----~~~ls~~RDkvi~vwd~~~~~~l~~ 229 (775)
T KOG0319|consen 154 LFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDS----LELLSVGRDKVIIVWDLVQYKKLKT 229 (775)
T ss_pred EeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCC----ceEEEeccCcEEEEeehhhhhhhhe
Confidence 9999754 68999999999999999655 488889999999999999854 56666666666666665
Q ss_pred --------------------------------------ccCccccceecc------------------------------
Q psy9598 594 --------------------------------------KLDIDISKTVFH------------------------------ 605 (1915)
Q Consensus 594 --------------------------------------~~~~~~~~~~~~------------------------------ 605 (1915)
.++.+.......
T Consensus 230 lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d 309 (775)
T KOG0319|consen 230 LPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYD 309 (775)
T ss_pred echhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEE
Confidence 222111000000
Q ss_pred -------------------------------------------CccccccccCCCCCceEEEEECCCCcEEEEEeCCCeE
Q psy9598 606 -------------------------------------------EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642 (1915)
Q Consensus 606 -------------------------------------------~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I 642 (1915)
.+......+.+|...|.++....+|.+|++|+.|.++
T Consensus 310 ~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~sv 389 (775)
T KOG0319|consen 310 EDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSV 389 (775)
T ss_pred ccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceE
Confidence 0000001234677778888866778899999999999
Q ss_pred EEEEecC-CCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccc
Q psy9598 643 RVYKMDG-VDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK 720 (1915)
Q Consensus 643 ~IwDl~~-~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (1915)
++|.++. .....++....+|++.|.+|+++..+ .+|+++|.|++|++|++...+.. ..............|
T Consensus 390 ilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~-------~~~~~~~~~~t~~aH 462 (775)
T KOG0319|consen 390 ILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKET-------AFPIVLTCRYTERAH 462 (775)
T ss_pred EEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccc-------cccceehhhHHHHhh
Confidence 9998832 23445566678999999999997765 48999999999999998763211 011111122345568
Q ss_pred cccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccc
Q psy9598 721 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 800 (1915)
Q Consensus 721 ~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~ 800 (1915)
...|++|+++|++..|++|+. |.+.+||++..+.++.+|.||...|++|.|+| ...+|+|+|.|++|+||.+.+..+
T Consensus 463 dKdIN~Vaia~ndkLiAT~Sq-DktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~-~dq~laT~SgD~TvKIW~is~fSC- 539 (775)
T KOG0319|consen 463 DKDINCVAIAPNDKLIATGSQ-DKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSK-NDQLLATCSGDKTVKIWSISTFSC- 539 (775)
T ss_pred cccccceEecCCCceEEeccc-ccceeeecccCceEEEEeeCCccceEEEEecc-ccceeEeccCCceEEEEEecccee-
Confidence 899999999999999999998 99999999999999999999999999999999 888999999999999999999999
Q ss_pred cceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCCC
Q psy9598 801 GYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR 854 (1915)
Q Consensus 801 ~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~ 854 (1915)
+.+|. +|..+|..+.|-.+|..|++++.||.|+||++.++.|..++-.
T Consensus 540 -lkT~e-----GH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~ 587 (775)
T KOG0319|consen 540 -LKTFE-----GHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA 587 (775)
T ss_pred -eeeec-----CccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh
Confidence 88887 6779999999999999999999999999999999999988865
No 10
>KOG0319|consensus
Probab=100.00 E-value=8.3e-34 Score=341.87 Aligned_cols=378 Identities=17% Similarity=0.263 Sum_probs=302.4
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeC-CCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Q psy9598 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG-CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 551 (1915)
Q Consensus 473 ~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~g-H~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~ 551 (1915)
......|++++++||+.+|++++..+.+++|++.+|+++..+++ |.++|.-++|+|.|.+|++|+.|+.|+|||+..+.
T Consensus 59 ~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~ 138 (775)
T KOG0319|consen 59 NEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGY 138 (775)
T ss_pred ccchhhhheeeecCCccEEEEeeccceEEEEEcccchHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCE
Confidence 45667899999999999999999999999999999999999988 99999999999999999999999999999999999
Q ss_pred eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCc
Q psy9598 552 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL 631 (1915)
Q Consensus 552 ~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~ 631 (1915)
+.+.|.||.+.|.++.|+|.. ....|++|..|++|++||+.+... .......|.+.|++++|++++.
T Consensus 139 ~th~fkG~gGvVssl~F~~~~--~~~lL~sg~~D~~v~vwnl~~~~t-----------cl~~~~~H~S~vtsL~~~~d~~ 205 (775)
T KOG0319|consen 139 CTHSFKGHGGVVSSLLFHPHW--NRWLLASGATDGTVRVWNLNDKRT-----------CLHTMILHKSAVTSLAFSEDSL 205 (775)
T ss_pred EEEEecCCCceEEEEEeCCcc--chhheeecCCCceEEEEEcccCch-----------HHHHHHhhhhheeeeeeccCCc
Confidence 999999999999999999976 457899999999999999986543 1112223455566666666665
Q ss_pred EEEEEeCCCeEEEEEec----------------------------------------------CC---------------
Q psy9598 632 FLATGSGDHHVRVYKMD----------------------------------------------GV--------------- 650 (1915)
Q Consensus 632 ~Lasgs~Dg~I~IwDl~----------------------------------------------~~--------------- 650 (1915)
.++++|.|..|.|||+. +.
T Consensus 206 ~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~ 285 (775)
T KOG0319|consen 206 ELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEID 285 (775)
T ss_pred eEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhh
Confidence 55555555555555542 00
Q ss_pred --------------------------------------------------------------------CCCceeEEeccC
Q psy9598 651 --------------------------------------------------------------------DSPLGILEVEEH 662 (1915)
Q Consensus 651 --------------------------------------------------------------------~~~~~i~~l~~h 662 (1915)
.... ...+.||
T Consensus 286 ~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~-c~ii~GH 364 (775)
T KOG0319|consen 286 HLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSY-CQIIPGH 364 (775)
T ss_pred cceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCc-eEEEeCc
Confidence 0000 1134578
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC-EEEEEEe
Q psy9598 663 SDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR-WVITAIN 741 (1915)
Q Consensus 663 ~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~-~L~t~s~ 741 (1915)
...|.++....+|.+|+|||.|.++++|.+..+.... .......+|.+.|.+|+++..+. ++++++.
T Consensus 365 ~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~------------~~~a~~~gH~~svgava~~~~~asffvsvS~ 432 (775)
T KOG0319|consen 365 TEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKS------------LCVAQANGHTNSVGAVAGSKLGASFFVSVSQ 432 (775)
T ss_pred hhheeeeeecccCcEEEEecCCceEEEEEecCCcchh------------hhhhhhcccccccceeeecccCccEEEEecC
Confidence 8888898866678899999999999999885443211 12234567899999999987765 4555555
Q ss_pred cCCeEEEEECCCCc-----eE----EEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCC
Q psy9598 742 FNFQIKIWDAFNGD-----LV----QVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQ 812 (1915)
Q Consensus 742 ~Dg~I~vwD~~tg~-----~i----~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~ 812 (1915)
|++|++|++...+ .+ .+...|...|++|+++| +..+|||||.|.+.+||++..... ..++. .
T Consensus 433 -D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l--~~vLs-----G 503 (775)
T KOG0319|consen 433 -DCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRL--LGVLS-----G 503 (775)
T ss_pred -CceEEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEecccccceeeecccCceE--EEEee-----C
Confidence 9999999987521 11 13458999999999999 889999999999999999996655 55544 5
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCCC------ceeecCCCCeee-ecCCCccceeecccCCCCC
Q psy9598 813 GEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR------ELFFHTDYRTLN-RPNGLFEPTYDEVTNLPPH 885 (1915)
Q Consensus 813 ~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~------~~~F~~d~~~Lv-~~~~~~~~v~D~~t~~~p~ 885 (1915)
|...|+++.|++..+.+|+++.|++|+||.+.++.|++++.+ ...|-.++..|+ .++.+.+.+|++.|..+..
T Consensus 504 H~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~ 583 (775)
T KOG0319|consen 504 HTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEM 583 (775)
T ss_pred CccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhh
Confidence 778899999999999999999999999999999999999986 356777777777 5566778999999986643
No 11
>KOG0318|consensus
Probab=100.00 E-value=2.4e-32 Score=317.69 Aligned_cols=422 Identities=19% Similarity=0.266 Sum_probs=327.7
Q ss_pred eeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEeCCCCCEEEEEEeCCCCEEEEEeC--CCcE
Q psy9598 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK--LLATLRGCSGEISDIAIDNRNILLAAGTV--DKTI 542 (1915)
Q Consensus 467 ~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~--~~~~l~gH~~~I~~Lafspdg~~LaSgs~--DgtI 542 (1915)
.....+.+|...|+-..|||.|-|||+|...|+|+|||..... +...++.-.++|.+|+|+.+++.|++.+. +...
T Consensus 50 ~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg 129 (603)
T KOG0318|consen 50 ASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFG 129 (603)
T ss_pred cceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCcccee
Confidence 3355778999999999999999999999999999999986532 34467778899999999999999988764 3334
Q ss_pred EEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceE
Q psy9598 543 RIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 543 rVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 622 (1915)
+++-..+|..+..+.||...|+++.|-|..+ ..+++|+.|++|-||+- .|..|...++.|...|.
T Consensus 130 ~~F~~DSG~SvGei~GhSr~ins~~~KpsRP---fRi~T~sdDn~v~ffeG------------PPFKFk~s~r~HskFV~ 194 (603)
T KOG0318|consen 130 HVFLWDSGNSVGEITGHSRRINSVDFKPSRP---FRIATGSDDNTVAFFEG------------PPFKFKSSFREHSKFVN 194 (603)
T ss_pred EEEEecCCCccceeeccceeEeeeeccCCCc---eEEEeccCCCeEEEeeC------------CCeeeeeccccccccee
Confidence 4444457888999999999999999999654 89999999999999862 35556677778889999
Q ss_pred EEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEec---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEE
Q psy9598 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE---EHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRF 699 (1915)
Q Consensus 623 ~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~---~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~ 699 (1915)
|+.|+|||.++++.+.||.|.|||- .....+..+. +|.+.|.+|+|+||+..|+++|.|.+++|||+.+..+..
T Consensus 195 ~VRysPDG~~Fat~gsDgki~iyDG---ktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~ 271 (603)
T KOG0318|consen 195 CVRYSPDGSRFATAGSDGKIYIYDG---KTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVS 271 (603)
T ss_pred eEEECCCCCeEEEecCCccEEEEcC---CCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEE
Confidence 9999999999999999999999997 4455566665 899999999999999999999999999999999877544
Q ss_pred eeecccc---------------------------cCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 700 IRLDMNT---------------------------CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 700 ~~~~~~~---------------------------~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
...-... ............+|...|++++.++++.+|++|+. ||.|.-|+..
T Consensus 272 t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgsy-DG~I~~W~~~ 350 (603)
T KOG0318|consen 272 TWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSY-DGHINSWDSG 350 (603)
T ss_pred EeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeecc-CceEEEEecC
Confidence 3211111 00111233456789999999999999999999999 9999999999
Q ss_pred CCceEEEe-eCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc------------ccceeeee------------
Q psy9598 753 NGDLVQVL-KGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ------------RGYKWFHN------------ 807 (1915)
Q Consensus 753 tg~~i~~l-~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~------------~~~~~~~~------------ 807 (1915)
+|..-... .+|...|.+++.+. ...|+|+|.|.+|++.++..+.. .++.....
T Consensus 351 ~g~~~~~~g~~h~nqI~~~~~~~--~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~i 428 (603)
T KOG0318|consen 351 SGTSDRLAGKGHTNQIKGMAASE--SGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDI 428 (603)
T ss_pred CccccccccccccceEEEEeecC--CCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcE
Confidence 88766554 68999999998864 45688999999999998743211 00110000
Q ss_pred -eecCC-------CCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccccc--------CCCceeecCCCCeee-ecCC
Q psy9598 808 -IVEGQ-------GEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQN--------IPRELFFHTDYRTLN-RPNG 870 (1915)
Q Consensus 808 -~~~~~-------~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~--------l~~~~~F~~d~~~Lv-~~~~ 870 (1915)
++..+ -.-...+++++|++..+|+|+.||.|+||.+........ -+..+.|++|+..|+ .+..
T Consensus 429 v~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~ 508 (603)
T KOG0318|consen 429 VLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDAS 508 (603)
T ss_pred EEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccC
Confidence 00000 012456789999999999999999999999997654322 123789999999998 5566
Q ss_pred CccceeecccCCCCCcCCCCcccC-CCCCCCCCCCcccccC
Q psy9598 871 LFEPTYDEVTNLPPHLMPPPFLVD-LNGTPYPPEVQRLVPG 910 (1915)
Q Consensus 871 ~~~~v~D~~t~~~p~~~~~pfl~~-~~G~~ypp~~Q~lv~G 910 (1915)
.-+-+||+++... +...-.|-.. ++...++|+.+++++|
T Consensus 509 rkvv~yd~~s~~~-~~~~w~FHtakI~~~aWsP~n~~vATG 548 (603)
T KOG0318|consen 509 RKVVLYDVASREV-KTNRWAFHTAKINCVAWSPNNKLVATG 548 (603)
T ss_pred CcEEEEEcccCce-ecceeeeeeeeEEEEEeCCCceEEEec
Confidence 6677999998766 3222233333 7788899999988876
No 12
>KOG0279|consensus
Probab=100.00 E-value=1.9e-33 Score=305.54 Aligned_cols=293 Identities=23% Similarity=0.332 Sum_probs=251.7
Q ss_pred ceeeeEEecCCCCcEEEEEEcCC-CCEEEEEECCCcEEEEECC-----CCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC
Q psy9598 465 NLRQHYVNLGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRAR-----DGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538 (1915)
Q Consensus 465 ~~~~~~~l~gH~~~V~~vafspd-g~~LaTGs~Dg~I~IWd~~-----tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~ 538 (1915)
.+.++-+|.||++.|+.++..+. -..|++++.|.+|.+|++. .|..++.|.||...|..++.++||++.++++.
T Consensus 4 ~l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 4 QLVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred hheeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence 34566789999999999999876 5788999999999999875 47789999999999999999999999999999
Q ss_pred CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCC
Q psy9598 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618 (1915)
Q Consensus 539 DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1915)
|+++++||+.+|+....|.||...|.+++|+++ ...+++||.|.+|++|++.+... .... -..+.
T Consensus 84 D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~d----n~qivSGSrDkTiklwnt~g~ck---~t~~--------~~~~~ 148 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTD----NRQIVSGSRDKTIKLWNTLGVCK---YTIH--------EDSHR 148 (315)
T ss_pred cceEEEEEecCCcEEEEEEecCCceEEEEecCC----CceeecCCCcceeeeeeecccEE---EEEe--------cCCCc
Confidence 999999999999999999999999999999994 48999999999999999876532 1111 01225
Q ss_pred CceEEEEECCC--CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy9598 619 AHILCSSFSPG--GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQ 696 (1915)
Q Consensus 619 ~~V~~l~fspd--g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~ 696 (1915)
..|.|+.|+|+ ..+|++++.|++|++||++ .......+.+|++.|+.+++||||..+++|+.||.+.+||++.++
T Consensus 149 ~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~---~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 149 EWVSCVRFSPNESNPIIVSASWDKTVKVWNLR---NCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred CcEEEEEEcCCCCCcEEEEccCCceEEEEccC---CcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCc
Confidence 88999999998 6799999999999999994 445556788999999999999999999999999999999999888
Q ss_pred eEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC----C-----CCCe
Q psy9598 697 WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG----H-----TNEV 767 (1915)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g----H-----~~~V 767 (1915)
..+. ..+...|.+++|+|+.-.|+++. +..|+|||+.++.++..+.. . .-..
T Consensus 226 ~lys-----------------l~a~~~v~sl~fspnrywL~~at--~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~c 286 (315)
T KOG0279|consen 226 NLYS-----------------LEAFDIVNSLCFSPNRYWLCAAT--ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPIC 286 (315)
T ss_pred eeEe-----------------ccCCCeEeeEEecCCceeEeecc--CCceEEEeccchhhhhhccccccccccccCCcEE
Confidence 6442 24677899999999887776665 56799999999988877652 2 2245
Q ss_pred EEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 768 FVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 768 ~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
.+++|++ +|..|++|-.|+.|++|.+.
T Consensus 287 lslaws~-dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 287 LSLAWSA-DGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEEEEcC-CCcEEEeeecCCcEEEEEee
Confidence 7788999 99999999999999999875
No 13
>KOG0318|consensus
Probab=100.00 E-value=4.2e-32 Score=315.72 Aligned_cols=403 Identities=16% Similarity=0.203 Sum_probs=312.6
Q ss_pred CccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEe---CCCCCE
Q psy9598 445 SREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR---GCSGEI 521 (1915)
Q Consensus 445 ~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~---gH~~~I 521 (1915)
-|.++|+-|+++.+.. ...++...++..|..-|+||.|+|||.++||++.||+|.|||-.+|+.+..|. +|.+.|
T Consensus 161 fRi~T~sdDn~v~ffe--GPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsI 238 (603)
T KOG0318|consen 161 FRIATGSDDNTVAFFE--GPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSI 238 (603)
T ss_pred eEEEeccCCCeEEEee--CCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccE
Confidence 4677899999998863 46777888999999999999999999999999999999999999999999998 999999
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCC---CCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc
Q psy9598 522 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ---GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598 (1915)
Q Consensus 522 ~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~---~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~ 598 (1915)
.+|+|+||++.|+++|.|.+++|||+.+.+++.++.... +.-..+.|.. ..|++.+.+|+|.+++...+..
T Consensus 239 falsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqk------d~lItVSl~G~in~ln~~d~~~ 312 (603)
T KOG0318|consen 239 FALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQK------DHLITVSLSGTINYLNPSDPSV 312 (603)
T ss_pred EEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeC------CeEEEEEcCcEEEEecccCCCh
Confidence 999999999999999999999999999999998886433 2334455543 7899999999999999877642
Q ss_pred ccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEE
Q psy9598 599 ISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678 (1915)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L 678 (1915)
+ ..+.+|...|++++.++++.+|++|+.||.|.-|+........ ..-.+|...|.+++.+..+ .+
T Consensus 313 ~------------~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~--~~g~~h~nqI~~~~~~~~~-~~ 377 (603)
T KOG0318|consen 313 L------------KVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDR--LAGKGHTNQIKGMAASESG-EL 377 (603)
T ss_pred h------------heecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccc--cccccccceEEEEeecCCC-cE
Confidence 2 2344778999999999999999999999999999994332211 1126799999999987544 57
Q ss_pred EEEeCCCcEEEEEccCCceEEee---eccc---------------ccCCCCccc-----cccccccccEEEEEECCCCCE
Q psy9598 679 VSGSRDGTALIWYYKCSQWRFIR---LDMN---------------TCLPHTKET-----SDETNKKIKVTMVAWDASDRW 735 (1915)
Q Consensus 679 ~sgs~DG~I~IWDl~~~~~~~~~---~~~~---------------~~~~~~~~~-----~~~~~~~~~V~~va~spdg~~ 735 (1915)
++++.|.++++.++......... +... .+....... ...........+++++|++..
T Consensus 378 ~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~ 457 (603)
T KOG0318|consen 378 FTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSE 457 (603)
T ss_pred EEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCE
Confidence 88899999999987543321110 0000 000000000 011123455678999999999
Q ss_pred EEEEEecCCeEEEEECCCCce--EEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCC
Q psy9598 736 VITAINFNFQIKIWDAFNGDL--VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQG 813 (1915)
Q Consensus 736 L~t~s~~Dg~I~vwD~~tg~~--i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~ 813 (1915)
+++|+. ||.|+||.+..+.+ ...+..|.++|++|+++| ++.+||+|...+.|.+||+.+......... -|
T Consensus 458 vaVGG~-Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySp-d~~yla~~Da~rkvv~yd~~s~~~~~~~w~------FH 529 (603)
T KOG0318|consen 458 VAVGGQ-DGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSP-DGAYLAAGDASRKVVLYDVASREVKTNRWA------FH 529 (603)
T ss_pred EEEecc-cceEEEEEecCCcccceeeeecccCCceEEEECC-CCcEEEEeccCCcEEEEEcccCceecceee------ee
Confidence 999999 99999999987553 335668999999999999 999999999999999999998876222222 36
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCCC-------ceeecCCCCeeeecCCCccceeec
Q psy9598 814 EGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR-------ELFFHTDYRTLNRPNGLFEPTYDE 878 (1915)
Q Consensus 814 ~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~-------~~~F~~d~~~Lv~~~~~~~~v~D~ 878 (1915)
.+.|.+++|+|+..+||+|+-|-.|.||++......-.+.. .+.|..+...+.....-.+.+|.+
T Consensus 530 takI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wlde~tvvSsG~Da~iK~W~v 601 (603)
T KOG0318|consen 530 TAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLDESTVVSSGQDANIKVWNV 601 (603)
T ss_pred eeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEEecCceEEeccCcceeEEecc
Confidence 78999999999999999999999999999986544433322 455655555554444444556654
No 14
>KOG0306|consensus
Probab=100.00 E-value=7.9e-33 Score=332.35 Aligned_cols=408 Identities=19% Similarity=0.249 Sum_probs=322.7
Q ss_pred ccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEe
Q psy9598 448 YSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527 (1915)
Q Consensus 448 ~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafs 527 (1915)
+.|..||.+.+|..... ....++.||..+|+++.|+..|.+||+||.|+.|.|||+-...-+..+.||...|+.+-|.
T Consensus 81 AVGYaDGsVqif~~~s~--~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~ 158 (888)
T KOG0306|consen 81 AVGYADGSVQIFSLESE--EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFL 158 (888)
T ss_pred EEEecCceEEeeccCCC--ceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhcc
Confidence 45888999999976544 5566899999999999999999999999999999999999888899999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc----------
Q psy9598 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI---------- 597 (1915)
Q Consensus 528 pdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~---------- 597 (1915)
.+.++|+|.|.|+.|++||+.+..|..+...|.+.|+++++.+ ..+++++.|+.+++|++....
T Consensus 159 ~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~------~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s 232 (888)
T KOG0306|consen 159 NGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE------KLLVTAGTDSELKVWELAFEDDEKETNRYIS 232 (888)
T ss_pred CCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec------ceEEEEecCCceEEEEeecccccccccccce
Confidence 9889999999999999999999999999999999999999987 789999999999999981100
Q ss_pred --------------ccc-----------------------------------c---------------------------
Q psy9598 598 --------------DIS-----------------------------------K--------------------------- 601 (1915)
Q Consensus 598 --------------~~~-----------------------------------~--------------------------- 601 (1915)
.+. .
T Consensus 233 ~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~ 312 (888)
T KOG0306|consen 233 TKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIK 312 (888)
T ss_pred eeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHH
Confidence 000 0
Q ss_pred ----ee-------c------cCc-----------------c-c---------cccccCCCCCceEEEEECCCCcEEEEEe
Q psy9598 602 ----TV-------F------HEP-----------------V-M---------FNERIRPGNAHILCSSFSPGGLFLATGS 637 (1915)
Q Consensus 602 ----~~-------~------~~~-----------------~-~---------~~~~~~~~~~~V~~l~fspdg~~Lasgs 637 (1915)
+. + ... . . ....+.+|...|.+++||.+...+++|+
T Consensus 313 r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga 392 (888)
T KOG0306|consen 313 RLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA 392 (888)
T ss_pred HHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC
Confidence 00 0 000 0 0 0011234556666677766665555543
Q ss_pred CCCeEEEEEecCC-------------------------------------CCCceeEEeccCCCCeeEEEEcCCCCEEEE
Q psy9598 638 GDHHVRVYKMDGV-------------------------------------DSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680 (1915)
Q Consensus 638 ~Dg~I~IwDl~~~-------------------------------------~~~~~i~~l~~h~~~V~sl~fspdg~~L~s 680 (1915)
.+.|+||+..+. .....+-+..+|.+.|++|+.+|++..+++
T Consensus 393 -~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT 471 (888)
T KOG0306|consen 393 -GESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVT 471 (888)
T ss_pred -CCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEE
Confidence 346666666421 111122234679999999999999999999
Q ss_pred EeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEe
Q psy9598 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760 (1915)
Q Consensus 681 gs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l 760 (1915)
||.|.+|++||+....-. .-...................|.|+.+||||++|+++-- |++|+||-+.+.+...+|
T Consensus 472 ~saDktVkfWdf~l~~~~----~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLL-dnTVkVyflDtlKFflsL 546 (888)
T KOG0306|consen 472 GSADKTVKFWDFKLVVSV----PGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLL-DNTVKVYFLDTLKFFLSL 546 (888)
T ss_pred ecCCcEEEEEeEEEEecc----CcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEec-cCeEEEEEecceeeeeee
Confidence 999999999997532100 000000000001112234578999999999999999998 999999999999999999
Q ss_pred eCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy9598 761 KGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLV 840 (1915)
Q Consensus 761 ~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~I 840 (1915)
.||.-+|.|+.++| |+.+++|||.|.+|+||-+.-|.| ...+. .|...|.++.|-|...++.+++.||.|+-
T Consensus 547 YGHkLPV~smDIS~-DSklivTgSADKnVKiWGLdFGDC--HKS~f-----AHdDSvm~V~F~P~~~~FFt~gKD~kvKq 618 (888)
T KOG0306|consen 547 YGHKLPVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDC--HKSFF-----AHDDSVMSVQFLPKTHLFFTCGKDGKVKQ 618 (888)
T ss_pred cccccceeEEeccC-CcCeEEeccCCCceEEeccccchh--hhhhh-----cccCceeEEEEcccceeEEEecCcceEEe
Confidence 99999999999999 999999999999999999999999 66665 67789999999999999999999999999
Q ss_pred EeCCCCcccccCCC------ceeecCCCCeeeecCCCc-cceee
Q psy9598 841 YGLGGFKRPQNIPR------ELFFHTDYRTLNRPNGLF-EPTYD 877 (1915)
Q Consensus 841 wdl~s~~~~~~l~~------~~~F~~d~~~Lv~~~~~~-~~v~D 877 (1915)
||-...+.+..+.. .+.-+++|..++..+..+ +.+|.
T Consensus 619 WDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 619 WDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred echhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeee
Confidence 99999999988887 356788898888777644 55664
No 15
>KOG0315|consensus
Probab=100.00 E-value=1.4e-32 Score=293.41 Aligned_cols=296 Identities=18% Similarity=0.279 Sum_probs=248.9
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc--eEEEeecCCCCeEE
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA--PISVLVGHQGIITG 565 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~--~~~~l~~h~~~V~s 565 (1915)
.-+|+|+|.|.+|++|...+|.+..++....+.|+.|.+.|++.+||+|+ ...||+||+.++. ++.++.+|+..|++
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVta 88 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTA 88 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEE
Confidence 35799999999999999999999999998888999999999999999988 4679999998865 58999999999999
Q ss_pred EEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEE
Q psy9598 566 VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645 (1915)
Q Consensus 566 l~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~Iw 645 (1915)
|.|.- +++.+++||.||+++|||++...+...+ .+..+|+++..+|+...|++|..+|.|+||
T Consensus 89 VgF~~----dgrWMyTgseDgt~kIWdlR~~~~qR~~-------------~~~spVn~vvlhpnQteLis~dqsg~irvW 151 (311)
T KOG0315|consen 89 VGFQC----DGRWMYTGSEDGTVKIWDLRSLSCQRNY-------------QHNSPVNTVVLHPNQTELISGDQSGNIRVW 151 (311)
T ss_pred EEEee----cCeEEEecCCCceEEEEeccCcccchhc-------------cCCCCcceEEecCCcceEEeecCCCcEEEE
Confidence 99997 5699999999999999999985432222 345889999999999999999999999999
Q ss_pred EecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEE
Q psy9598 646 KMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVT 725 (1915)
Q Consensus 646 Dl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 725 (1915)
|+.... ... ..+..-...|.++...|+|.+|+.+...|...+|++-+.+.. ...........|...+.
T Consensus 152 Dl~~~~-c~~-~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~----------s~l~P~~k~~ah~~~il 219 (311)
T KOG0315|consen 152 DLGENS-CTH-ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTA----------SELEPVHKFQAHNGHIL 219 (311)
T ss_pred EccCCc-ccc-ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcc----------ccceEhhheecccceEE
Confidence 994321 111 112344578999999999999999999999999998764421 11222334567889999
Q ss_pred EEEECCCCCEEEEEEecCCeEEEEECCCC-ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcccccee
Q psy9598 726 MVAWDASDRWVITAINFNFQIKIWDAFNG-DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW 804 (1915)
Q Consensus 726 ~va~spdg~~L~t~s~~Dg~I~vwD~~tg-~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~ 804 (1915)
.+.+||++++|+++++ |.+++||++.+. +.-..+.+|...++.++||. ++.||+||+.|+.+++|++..++. +..
T Consensus 220 ~C~lSPd~k~lat~ss-dktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~-dg~YlvTassd~~~rlW~~~~~k~--v~q 295 (311)
T KOG0315|consen 220 RCLLSPDVKYLATCSS-DKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSA-DGEYLVTASSDHTARLWDLSAGKE--VRQ 295 (311)
T ss_pred EEEECCCCcEEEeecC-CceEEEEecCCceeeEEEeecCCceEEeeeecc-CccEEEecCCCCceeecccccCce--eee
Confidence 9999999999999999 999999999887 66778899999999999999 999999999999999999999987 666
Q ss_pred eeeeecCCCCcceEEEEE
Q psy9598 805 FHNIVEGQGEGALFDGKW 822 (1915)
Q Consensus 805 ~~~~~~~~~~~~V~~vaf 822 (1915)
+. .|+.+..|++.
T Consensus 296 y~-----gh~K~~vc~~l 308 (311)
T KOG0315|consen 296 YQ-----GHHKAAVCVAL 308 (311)
T ss_pred cC-----CcccccEEEEe
Confidence 55 34445555543
No 16
>KOG0291|consensus
Probab=100.00 E-value=1.8e-31 Score=320.97 Aligned_cols=378 Identities=18% Similarity=0.293 Sum_probs=303.6
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC--------cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG--------KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 547 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg--------~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl 547 (1915)
..+|.||.|||+|+++|.|... .+.||..... .+..++.||-..|++|.|+.|.++|++||.|.+++||++
T Consensus 96 k~~v~~i~fSPng~~fav~~gn-~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v 174 (893)
T KOG0291|consen 96 KRGVGAIKFSPNGKFFAVGCGN-LLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGV 174 (893)
T ss_pred cCccceEEECCCCcEEEEEecc-eeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEe
Confidence 5789999999999999998765 8999986432 356678899999999999999999999999999999999
Q ss_pred CCCce--EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccce-------------------eccC
Q psy9598 548 QTLAP--ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT-------------------VFHE 606 (1915)
Q Consensus 548 ~tg~~--~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~-------------------~~~~ 606 (1915)
...+. ...+.+|.+.|.+.-|..+ ...|++.+.||.|.+|........... ..+.
T Consensus 175 ~~~k~~~~~~l~gHkd~VvacfF~~~----~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~ 250 (893)
T KOG0291|consen 175 DGNKNLFTYALNGHKDYVVACFFGAN----SLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHK 250 (893)
T ss_pred ccccccceEeccCCCcceEEEEeccC----cceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcc
Confidence 87665 6678899999999999874 478999999999999987622100000 0000
Q ss_pred cc---ccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC
Q psy9598 607 PV---MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 683 (1915)
Q Consensus 607 ~~---~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~ 683 (1915)
.. .....+......|+|++|++....||+|-..|...+|.+ .....++.+.-....|..++|+..|..|+.|+.
T Consensus 251 ~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~Lyel---P~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~ 327 (893)
T KOG0291|consen 251 IFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYEL---PDFNLIHSLSISDQKILTVSFNSTGDWIAFGCS 327 (893)
T ss_pred eEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEec---CCceEEEEeecccceeeEEEecccCCEEEEcCC
Confidence 00 000112223378999999999999999999999999999 455667777777789999999999999999886
Q ss_pred C-CcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC
Q psy9598 684 D-GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762 (1915)
Q Consensus 684 D-G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g 762 (1915)
. |.+.||+.++...+. ...+|...+++++++|||++|++|+. ||.|+|||..+|-|+.+|..
T Consensus 328 klgQLlVweWqsEsYVl----------------KQQgH~~~i~~l~YSpDgq~iaTG~e-DgKVKvWn~~SgfC~vTFte 390 (893)
T KOG0291|consen 328 KLGQLLVWEWQSESYVL----------------KQQGHSDRITSLAYSPDGQLIATGAE-DGKVKVWNTQSGFCFVTFTE 390 (893)
T ss_pred ccceEEEEEeeccceee----------------eccccccceeeEEECCCCcEEEeccC-CCcEEEEeccCceEEEEecc
Confidence 5 899999988766432 34568889999999999999999999 99999999999999999999
Q ss_pred CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeee-----------------------------------
Q psy9598 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHN----------------------------------- 807 (1915)
Q Consensus 763 H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~----------------------------------- 807 (1915)
|++.|+++.|+. .++.|++.+-||+|+.||+...+. .++|..
T Consensus 391 Hts~Vt~v~f~~-~g~~llssSLDGtVRAwDlkRYrN--fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT 467 (893)
T KOG0291|consen 391 HTSGVTAVQFTA-RGNVLLSSSLDGTVRAWDLKRYRN--FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT 467 (893)
T ss_pred CCCceEEEEEEe-cCCEEEEeecCCeEEeeeecccce--eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec
Confidence 999999999999 999999999999999999976544 222210
Q ss_pred ----eecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-ccccC-----CCceeecCCCCeeeecC-CCcccee
Q psy9598 808 ----IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFK-RPQNI-----PRELFFHTDYRTLNRPN-GLFEPTY 876 (1915)
Q Consensus 808 ----~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~-~~~~l-----~~~~~F~~d~~~Lv~~~-~~~~~v~ 876 (1915)
-+..+|.++|.+++|+|+|..||+++.|.+|++|++-+.. ...++ ...+.|+|||.-++... .+.+.+|
T Consensus 468 GqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~ 547 (893)
T KOG0291|consen 468 GQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFF 547 (893)
T ss_pred CeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEE
Confidence 0113567999999999999999999999999999986542 22222 23688999999888554 3346689
Q ss_pred ecccC
Q psy9598 877 DEVTN 881 (1915)
Q Consensus 877 D~~t~ 881 (1915)
|...+
T Consensus 548 d~~~~ 552 (893)
T KOG0291|consen 548 DIKEA 552 (893)
T ss_pred Ehhhc
Confidence 97754
No 17
>KOG0286|consensus
Probab=100.00 E-value=2.9e-32 Score=297.54 Aligned_cols=293 Identities=17% Similarity=0.222 Sum_probs=259.8
Q ss_pred EEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEE
Q psy9598 511 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590 (1915)
Q Consensus 511 ~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~i 590 (1915)
..+|+||.+.|.++.|++|.++|+|+|.||.+.|||.-|...++.+.-....|..++|+|.+ +++++|+-|+...|
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg----~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSG----NFVACGGLDNKCSI 123 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCC----CeEEecCcCceeEE
Confidence 37899999999999999999999999999999999999999999998889999999999954 99999999999999
Q ss_pred EecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEE
Q psy9598 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQ 670 (1915)
Q Consensus 591 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~ 670 (1915)
|++.+..... .......+.+|.+.+.|+.|..|+ .|++|+.|.+..+||+ ...+.+..+.+|.+.|.+|+
T Consensus 124 y~ls~~d~~g------~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDi---e~g~~~~~f~GH~gDV~sls 193 (343)
T KOG0286|consen 124 YPLSTRDAEG------NVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDI---ETGQQTQVFHGHTGDVMSLS 193 (343)
T ss_pred Eecccccccc------cceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEc---ccceEEEEecCCcccEEEEe
Confidence 9998652211 112233456889999999999855 7999999999999999 56778889999999999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEE
Q psy9598 671 WSH-SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIW 749 (1915)
Q Consensus 671 fsp-dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vw 749 (1915)
++| +++.|++|+.|++.+|||++.+.++.. ..+|...|++|+|.|+|.-+++|+. |+++++|
T Consensus 194 l~p~~~ntFvSg~cD~~aklWD~R~~~c~qt----------------F~ghesDINsv~ffP~G~afatGSD-D~tcRly 256 (343)
T KOG0286|consen 194 LSPSDGNTFVSGGCDKSAKLWDVRSGQCVQT----------------FEGHESDINSVRFFPSGDAFATGSD-DATCRLY 256 (343)
T ss_pred cCCCCCCeEEecccccceeeeeccCcceeEe----------------ecccccccceEEEccCCCeeeecCC-CceeEEE
Confidence 999 999999999999999999999886653 4568899999999999999999998 9999999
Q ss_pred ECCCCceEEEeeCC--CCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCC
Q psy9598 750 DAFNGDLVQVLKGH--TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT 827 (1915)
Q Consensus 750 D~~tg~~i~~l~gH--~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~ 827 (1915)
|++..+.+..+... ..+|++|+|+- .|++|++|..|.++.+||.-.++. +..+. .|.+.|.++..+|||.
T Consensus 257 DlRaD~~~a~ys~~~~~~gitSv~FS~-SGRlLfagy~d~~c~vWDtlk~e~--vg~L~-----GHeNRvScl~~s~DG~ 328 (343)
T KOG0286|consen 257 DLRADQELAVYSHDSIICGITSVAFSK-SGRLLFAGYDDFTCNVWDTLKGER--VGVLA-----GHENRVSCLGVSPDGM 328 (343)
T ss_pred eecCCcEEeeeccCcccCCceeEEEcc-cccEEEeeecCCceeEeeccccce--EEEee-----ccCCeeEEEEECCCCc
Confidence 99999988888732 35899999998 999999999999999999988777 44444 6778999999999999
Q ss_pred EEEEEeCCCeEEEEe
Q psy9598 828 TCALTDSYGHLLVYG 842 (1915)
Q Consensus 828 ~Lasg~~dG~I~Iwd 842 (1915)
.|++|+.|..|+||.
T Consensus 329 av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 329 AVATGSWDSTLRIWA 343 (343)
T ss_pred EEEecchhHheeecC
Confidence 999999999999994
No 18
>KOG0295|consensus
Probab=100.00 E-value=2.4e-33 Score=314.15 Aligned_cols=301 Identities=23% Similarity=0.384 Sum_probs=270.5
Q ss_pred EEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy9598 457 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAG 536 (1915)
Q Consensus 457 ~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSg 536 (1915)
..+........+...+.||..+|+.+.|+|+-.++|+++.|++|++||..+|++...++||...|.+|+|+..|.+||++
T Consensus 89 ~~~~~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tc 168 (406)
T KOG0295|consen 89 RTPALWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATC 168 (406)
T ss_pred cChhhcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEec
Confidence 33333445556667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEECCC-CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccC
Q psy9598 537 TVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 615 (1915)
Q Consensus 537 s~DgtIrVWDl~t-g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~ 615 (1915)
+.|-.+.+||..+ .+++..+.+|...|.+++|.|.+ .+|++++.|.+|+.|++.++-++.++.
T Consensus 169 SsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~g----d~ilS~srD~tik~We~~tg~cv~t~~------------ 232 (406)
T KOG0295|consen 169 SSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLG----DHILSCSRDNTIKAWECDTGYCVKTFP------------ 232 (406)
T ss_pred CCccchhheeHHHHHHHHHHhcCcccceeeEEEEecC----CeeeecccccceeEEecccceeEEecc------------
Confidence 9999999999987 67888899999999999999964 999999999999999999997655443
Q ss_pred CCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCC---------------CCEEEE
Q psy9598 616 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS---------------HLRFVS 680 (1915)
Q Consensus 616 ~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspd---------------g~~L~s 680 (1915)
+|...|..+..+.||.++++++.|.+|++|-+ ....+...+..|..+|-+++|.|. +.++++
T Consensus 233 ~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~---~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s 309 (406)
T KOG0295|consen 233 GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVV---ATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGS 309 (406)
T ss_pred CchHhEEEEEecCCeeEEEecCCCceEEEEEe---ccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEe
Confidence 45678999999999999999999999999998 444556678899999999999763 258999
Q ss_pred EeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEe
Q psy9598 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760 (1915)
Q Consensus 681 gs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l 760 (1915)
++.|++|++||+.++.++.. ..+|...|..++|+|.|+||+++.. |++++|||+.++++..++
T Consensus 310 ~SrDktIk~wdv~tg~cL~t----------------L~ghdnwVr~~af~p~Gkyi~ScaD-Dktlrvwdl~~~~cmk~~ 372 (406)
T KOG0295|consen 310 GSRDKTIKIWDVSTGMCLFT----------------LVGHDNWVRGVAFSPGGKYILSCAD-DKTLRVWDLKNLQCMKTL 372 (406)
T ss_pred ecccceEEEEeccCCeEEEE----------------EecccceeeeeEEcCCCeEEEEEec-CCcEEEEEeccceeeecc
Confidence 99999999999999986653 3568899999999999999999998 999999999999999999
Q ss_pred eCCCCCeEEEEEccCCCCEEEEEecCceEEEEEC
Q psy9598 761 KGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 761 ~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
..|..-|+++.|+. +..+++||+-|.++++|.-
T Consensus 373 ~ah~hfvt~lDfh~-~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 373 EAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred CCCcceeEEEecCC-CCceEEeccccceeeeeec
Confidence 99999999999998 7789999999999999964
No 19
>KOG0285|consensus
Probab=100.00 E-value=7.2e-33 Score=308.04 Aligned_cols=302 Identities=24% Similarity=0.376 Sum_probs=258.3
Q ss_pred cCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCc
Q psy9598 462 KYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541 (1915)
Q Consensus 462 ~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~Dgt 541 (1915)
....+++.+.+.||.+.|.||++.|.+.+|+||+.|++|+|||+.+|++..++.||-..|..+++|+-..||++++.|+.
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~ 216 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQ 216 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCe
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCce
Q psy9598 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI 621 (1915)
Q Consensus 542 IrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V 621 (1915)
|+.||+...+.+..+.||-..|.|++.+|.- +.|++|+.|.++++||+++.
T Consensus 217 VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTl----dvl~t~grDst~RvWDiRtr------------------------- 267 (460)
T KOG0285|consen 217 VKCWDLEYNKVIRHYHGHLSGVYCLDLHPTL----DVLVTGGRDSTIRVWDIRTR------------------------- 267 (460)
T ss_pred eEEEechhhhhHHHhccccceeEEEeccccc----eeEEecCCcceEEEeeeccc-------------------------
Confidence 9999999999999999999999888888843 55566665555555555433
Q ss_pred EEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEee
Q psy9598 622 LCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 701 (1915)
Q Consensus 622 ~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~ 701 (1915)
..+..+.||..+|.+|.+.|....+++||.|++|++||+..++...
T Consensus 268 --------------------------------~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~-- 313 (460)
T KOG0285|consen 268 --------------------------------ASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMI-- 313 (460)
T ss_pred --------------------------------ceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeE--
Confidence 3355677899999999999988899999999999999999887433
Q ss_pred ecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEE
Q psy9598 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 781 (1915)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~La 781 (1915)
....|...|.+++.+|....+++++. ..|+.|++..|..++.+.+|...|++++.+. ..+++
T Consensus 314 --------------tlt~hkksvral~lhP~e~~fASas~--dnik~w~~p~g~f~~nlsgh~~iintl~~ns--D~v~~ 375 (460)
T KOG0285|consen 314 --------------TLTHHKKSVRALCLHPKENLFASASP--DNIKQWKLPEGEFLQNLSGHNAIINTLSVNS--DGVLV 375 (460)
T ss_pred --------------eeecccceeeEEecCCchhhhhccCC--ccceeccCCccchhhccccccceeeeeeecc--CceEE
Confidence 23457888999999999988888875 5699999999999999999999999999876 56899
Q ss_pred EEecCceEEEEECCCCccccceeeeeeecC---CCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9598 782 SAGHDGLIIIWDILSSKQRGYKWFHNIVEG---QGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 782 Sgs~DG~I~IWdl~s~~~~~~~~~~~~~~~---~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
+|+..|.|.+||..++-. .+.+..++.. .....|++.+|...|..|++|..|.+|.+|.-+..
T Consensus 376 ~G~dng~~~fwdwksg~n--yQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 376 SGGDNGSIMFWDWKSGHN--YQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEH 441 (460)
T ss_pred EcCCceEEEEEecCcCcc--cccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccc
Confidence 999999999999999876 4444332221 12257899999999999999999999999986654
No 20
>KOG0265|consensus
Probab=100.00 E-value=1.2e-32 Score=301.92 Aligned_cols=290 Identities=20% Similarity=0.329 Sum_probs=251.2
Q ss_pred EecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC-CCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q psy9598 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~-tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t 549 (1915)
.+.||.+.|+++.|+|+|.+||||+.|..|.+|++. ..+-...++||.+.|..+.|..|++.|+++|.|.+|++||+++
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t 121 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAET 121 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence 567999999999999999999999999999999954 4466778899999999999999999999999999999999999
Q ss_pred CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC
Q psy9598 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629 (1915)
Q Consensus 550 g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd 629 (1915)
|+++..+.+|.+.|+++.-+.. +..++.+|+.||++++||++....+.++.. ..++++++|...
T Consensus 122 G~~~rk~k~h~~~vNs~~p~rr---g~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-------------kyqltAv~f~d~ 185 (338)
T KOG0265|consen 122 GKRIRKHKGHTSFVNSLDPSRR---GPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-------------KYQLTAVGFKDT 185 (338)
T ss_pred ceeeehhccccceeeecCcccc---CCeEEEecCCCceEEEEeecccchhhcccc-------------ceeEEEEEeccc
Confidence 9999999999999999984442 457889999999999999998766544422 267899999999
Q ss_pred CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCc----eEEeeeccc
Q psy9598 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQ----WRFIRLDMN 705 (1915)
Q Consensus 630 g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~----~~~~~~~~~ 705 (1915)
+..+++|+-|+.|++||++ .......+.||.+.|+.|..+++|.++.+-+.|.++++||++... ++.+..
T Consensus 186 s~qv~sggIdn~ikvWd~r---~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~--- 259 (338)
T KOG0265|consen 186 SDQVISGGIDNDIKVWDLR---KNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQ--- 259 (338)
T ss_pred ccceeeccccCceeeeccc---cCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEee---
Confidence 9999999999999999994 345678899999999999999999999999999999999987432 111111
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEec
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~ 785 (1915)
............++|+|+++++.+++. |..+++||..+..++..+.||.+.|++++|+| ...+|.+++.
T Consensus 260 ---------g~~hnfeknlL~cswsp~~~~i~ags~-dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp-~e~iils~~s 328 (338)
T KOG0265|consen 260 ---------GHIHNFEKNLLKCSWSPNGTKITAGSA-DRFVYVWDTTSRRILYKLPGHYGSVNEVDFHP-TEPIILSCSS 328 (338)
T ss_pred ---------cchhhhhhhcceeeccCCCCccccccc-cceEEEeecccccEEEEcCCcceeEEEeeecC-CCcEEEEecc
Confidence 111122334567899999999999988 99999999999999999999999999999999 8899999999
Q ss_pred CceEEEEE
Q psy9598 786 DGLIIIWD 793 (1915)
Q Consensus 786 DG~I~IWd 793 (1915)
|.+|++=.
T Consensus 329 dk~i~lge 336 (338)
T KOG0265|consen 329 DKTIYLGE 336 (338)
T ss_pred CceeEeec
Confidence 99998743
No 21
>KOG0279|consensus
Probab=100.00 E-value=8.1e-32 Score=292.97 Aligned_cols=294 Identities=23% Similarity=0.327 Sum_probs=245.7
Q ss_pred cEEEEEeCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECC-----CCceEEEeecCCCCeEEEEeccCccCCCcEEEEE
Q psy9598 509 KLLATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQ-----TLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582 (1915)
Q Consensus 509 ~~~~~l~gH~~~I~~Lafspd-g~~LaSgs~DgtIrVWDl~-----tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg 582 (1915)
.+..++.+|.+.|+.++..+. ...|++++.|.+|.+|++. .|.++..+.||...|..+..++ ++++.+++
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~----dg~~alS~ 81 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSS----DGNFALSA 81 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEcc----CCceEEec
Confidence 456689999999999999886 5689999999999999985 4778999999999999999998 55999999
Q ss_pred eCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccC
Q psy9598 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH 662 (1915)
Q Consensus 583 s~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h 662 (1915)
+.|+++++||+.++.... .+.+|...|.+++|+++.+.|++|+.|.+|++|++-+ .+..++..+
T Consensus 82 swD~~lrlWDl~~g~~t~------------~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g----~ck~t~~~~ 145 (315)
T KOG0279|consen 82 SWDGTLRLWDLATGESTR------------RFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG----VCKYTIHED 145 (315)
T ss_pred cccceEEEEEecCCcEEE------------EEEecCCceEEEEecCCCceeecCCCcceeeeeeecc----cEEEEEecC
Confidence 999999999999885422 2336788999999999999999999999999999832 334444333
Q ss_pred --CCCeeEEEEcCC--CCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEE
Q psy9598 663 --SDKVDSIQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738 (1915)
Q Consensus 663 --~~~V~sl~fspd--g~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t 738 (1915)
.+.|.|+.|+|+ ..+|+++|.|++|++||+++.+.. ....+|.+.++.+++||||..+++
T Consensus 146 ~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~----------------~~~~gh~~~v~t~~vSpDGslcas 209 (315)
T KOG0279|consen 146 SHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLR----------------TTFIGHSGYVNTVTVSPDGSLCAS 209 (315)
T ss_pred CCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchh----------------hccccccccEEEEEECCCCCEEec
Confidence 789999999999 679999999999999999987633 234568899999999999999999
Q ss_pred EEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCC----CC
Q psy9598 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQ----GE 814 (1915)
Q Consensus 739 ~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~----~~ 814 (1915)
|+. ||.+.+||+..++.+..+ +|...|.+++|+| + ++.+++..+..|+|||+.++.. +..+..-..+. ..
T Consensus 210 Ggk-dg~~~LwdL~~~k~lysl-~a~~~v~sl~fsp-n-rywL~~at~~sIkIwdl~~~~~--v~~l~~d~~g~s~~~~~ 283 (315)
T KOG0279|consen 210 GGK-DGEAMLWDLNEGKNLYSL-EAFDIVNSLCFSP-N-RYWLCAATATSIKIWDLESKAV--VEELKLDGIGPSSKAGD 283 (315)
T ss_pred CCC-CceEEEEEccCCceeEec-cCCCeEeeEEecC-C-ceeEeeccCCceEEEeccchhh--hhhccccccccccccCC
Confidence 888 999999999999998887 4778899999999 4 5555566677899999999887 54444222221 11
Q ss_pred cceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9598 815 GALFDGKWSPDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 815 ~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
....+++|++||..|.+|..|+.|++|.+.
T Consensus 284 ~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 284 PICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred cEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 235678999999999999999999999875
No 22
>KOG0296|consensus
Probab=100.00 E-value=1.4e-31 Score=300.36 Aligned_cols=340 Identities=17% Similarity=0.212 Sum_probs=282.2
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t 549 (1915)
.+|.+|+.+|++|+.+|+.+++|||+.|..-.||++.+|..+..+.||...|+|+.|+.+|.+||||..+|.|+||...+
T Consensus 58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st 137 (399)
T KOG0296|consen 58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST 137 (399)
T ss_pred eehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC
Q psy9598 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629 (1915)
Q Consensus 550 g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd 629 (1915)
+.....+...-..|.-+.|+|.. ..|+.|+.||.|-+|.+..... ...+.+|+..++|-.|.|+
T Consensus 138 g~~~~~~~~e~~dieWl~WHp~a----~illAG~~DGsvWmw~ip~~~~------------~kv~~Gh~~~ct~G~f~pd 201 (399)
T KOG0296|consen 138 GGEQWKLDQEVEDIEWLKWHPRA----HILLAGSTDGSVWMWQIPSQAL------------CKVMSGHNSPCTCGEFIPD 201 (399)
T ss_pred CceEEEeecccCceEEEEecccc----cEEEeecCCCcEEEEECCCcce------------eeEecCCCCCcccccccCC
Confidence 99998887777888999999954 8999999999999999877522 2233467899999999999
Q ss_pred CcEEEEEeCCCeEEEEEecCCCCCceeEEecc-CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccC
Q psy9598 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEE-HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708 (1915)
Q Consensus 630 g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~-h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~ 708 (1915)
|+.+++|..||+|++|++. +...+..+.+ ......++.++..+..+++|+.++.+++-...+++.+......
T Consensus 202 GKr~~tgy~dgti~~Wn~k---tg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~---- 274 (399)
T KOG0296|consen 202 GKRILTGYDDGTIIVWNPK---TGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGT---- 274 (399)
T ss_pred CceEEEEecCceEEEEecC---CCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCC----
Confidence 9999999999999999994 3344444432 2445778899999999999999999999988888755433210
Q ss_pred CCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCce
Q psy9598 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGL 788 (1915)
Q Consensus 709 ~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~ 788 (1915)
..............|-++.|+..=.+.++|+- ||+|.|||+.+..+.+.+ .|...|+.+.|-+ ..+|++++.+|.
T Consensus 275 -~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v-dG~i~iyD~a~~~~R~~c-~he~~V~~l~w~~--t~~l~t~c~~g~ 349 (399)
T KOG0296|consen 275 -VPELKPSQEELDESVESIPSSSKLPLAACGSV-DGTIAIYDLAASTLRHIC-EHEDGVTKLKWLN--TDYLLTACANGK 349 (399)
T ss_pred -Cccccccchhhhhhhhhcccccccchhhcccc-cceEEEEecccchhheec-cCCCceEEEEEcC--cchheeeccCce
Confidence 00111111222334444555555556666666 999999999887766655 5888899999987 678999999999
Q ss_pred EEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9598 789 IIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 789 I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
|++||.++|++ +..+. .|...|.+++++|+++++++++.|+..+||.+.
T Consensus 350 v~~wDaRtG~l--~~~y~-----GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 350 VRQWDARTGQL--KFTYT-----GHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEeeeccccce--EEEEe-----cCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 99999999999 66666 677899999999999999999999999999864
No 23
>KOG0293|consensus
Probab=100.00 E-value=1.5e-32 Score=310.47 Aligned_cols=293 Identities=18% Similarity=0.271 Sum_probs=241.2
Q ss_pred eeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC---cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Q psy9598 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG---KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIR 543 (1915)
Q Consensus 467 ~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg---~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIr 543 (1915)
+..++|..|++.|+-+.||++|+|||||+.|.+..||.+... ++.+++.||..+|..|.||||.++|++|+.|..+.
T Consensus 215 qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~ 294 (519)
T KOG0293|consen 215 QTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS 294 (519)
T ss_pred hhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence 344578899999999999999999999999999999987543 56889999999999999999999999999999999
Q ss_pred EEECCCCceEEEee-cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceE
Q psy9598 544 IWNLQTLAPISVLV-GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 544 VWDl~tg~~~~~l~-~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 622 (1915)
+||+.+|.+.+.+. +|...+.+++|+|+ +..+++|+.|++|..||++....-..... ....|.
T Consensus 295 lwDv~tgd~~~~y~~~~~~S~~sc~W~pD----g~~~V~Gs~dr~i~~wdlDgn~~~~W~gv------------r~~~v~ 358 (519)
T KOG0293|consen 295 LWDVDTGDLRHLYPSGLGFSVSSCAWCPD----GFRFVTGSPDRTIIMWDLDGNILGNWEGV------------RDPKVH 358 (519)
T ss_pred eccCCcchhhhhcccCcCCCcceeEEccC----CceeEecCCCCcEEEecCCcchhhccccc------------ccceeE
Confidence 99999999888775 35678999999995 48899999999999999987642111111 124589
Q ss_pred EEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 623 ~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
+++.++||.++++.+.|..|++|+..... ... +..-..+|+++++|.+|.++++.-.+..|++||+.....+..
T Consensus 359 dlait~Dgk~vl~v~~d~~i~l~~~e~~~---dr~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~k-- 432 (519)
T KOG0293|consen 359 DLAITYDGKYVLLVTVDKKIRLYNREARV---DRG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRK-- 432 (519)
T ss_pred EEEEcCCCcEEEEEecccceeeechhhhh---hhc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHH--
Confidence 99999999999999999999999984322 111 223457899999999999999999999999999985442211
Q ss_pred cccccCCCCccccccccc--cccEEEEEECCC-CCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCE
Q psy9598 703 DMNTCLPHTKETSDETNK--KIKVTMVAWDAS-DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 779 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~--~~~V~~va~spd-g~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~ 779 (1915)
..+| ..-+..-||... ..++++|+. |+.|+||+..+|+++.++.||...|++|+|+|.+..+
T Consensus 433 --------------Y~Ghkq~~fiIrSCFgg~~~~fiaSGSE-D~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m 497 (519)
T KOG0293|consen 433 --------------YFGHKQGHFIIRSCFGGGNDKFIASGSE-DSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEM 497 (519)
T ss_pred --------------hhcccccceEEEeccCCCCcceEEecCC-CceEEEEEccCCceeEeecCCcceeeEEecCCCCHHH
Confidence 1112 223344455544 466777766 9999999999999999999999999999999999999
Q ss_pred EEEEecCceEEEEECCC
Q psy9598 780 LLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 780 LaSgs~DG~I~IWdl~s 796 (1915)
+|+||.||+|+||-...
T Consensus 498 ~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 498 FASASDDGTIRIWGPSD 514 (519)
T ss_pred hhccCCCCeEEEecCCc
Confidence 99999999999998754
No 24
>KOG0645|consensus
Probab=100.00 E-value=3.6e-31 Score=286.64 Aligned_cols=294 Identities=21% Similarity=0.344 Sum_probs=249.1
Q ss_pred eeeeEEecCCCCcEEEEEEcCC-CCEEEEEECCCcEEEEECCC---CcEEEEE-eCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy9598 466 LRQHYVNLGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARD---GKLLATL-RGCSGEISDIAIDNRNILLAAGTVDK 540 (1915)
Q Consensus 466 ~~~~~~l~gH~~~V~~vafspd-g~~LaTGs~Dg~I~IWd~~t---g~~~~~l-~gH~~~I~~Lafspdg~~LaSgs~Dg 540 (1915)
+...+++.||.+.|+.++|+|- |..|||||.|..|+||+... ..+...+ .+|...|.+++|+|.|++||+||.|.
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 4456789999999999999998 88999999999999999875 3455555 48999999999999999999999999
Q ss_pred cEEEEECCC--CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCC
Q psy9598 541 TIRIWNLQT--LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618 (1915)
Q Consensus 541 tIrVWDl~t--g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1915)
++.||.-.. .+++.+|.||...|.|++|++ ++.+|++++.|.+|-||.+..+... .....+.+|.
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~----sG~~LATCSRDKSVWiWe~deddEf---------ec~aVL~~Ht 150 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSA----SGNYLATCSRDKSVWIWEIDEDDEF---------ECIAVLQEHT 150 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcC----CCCEEEEeeCCCeEEEEEecCCCcE---------EEEeeecccc
Confidence 999998753 578999999999999999998 4599999999999999998755322 2233456788
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceE
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~ 698 (1915)
..|..+.|+|...+|++++.|.+|++|.-.......++.++.+|.+.|.+++|++.|..|++++.|++|+||-+.+.-
T Consensus 151 qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~-- 228 (312)
T KOG0645|consen 151 QDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL-- 228 (312)
T ss_pred ccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc--
Confidence 999999999999999999999999999886566778899999999999999999999999999999999999644221
Q ss_pred EeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC------ceEE-EeeCCCCCeEEEE
Q psy9598 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG------DLVQ-VLKGHTNEVFVLE 771 (1915)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg------~~i~-~l~gH~~~V~sl~ 771 (1915)
...|...+..++|. ...|++++. |+.|++|-...+ +++. .-..|...|++|.
T Consensus 229 ------------------~~~~sr~~Y~v~W~--~~~IaS~gg-D~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~ 287 (312)
T KOG0645|consen 229 ------------------SGMHSRALYDVPWD--NGVIASGGG-DDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQ 287 (312)
T ss_pred ------------------chhcccceEeeeec--ccceEeccC-CCEEEEEEecCCCCCchHHHHHhhhcccccccceEE
Confidence 12366788999998 557788887 999999976542 1222 3347888999999
Q ss_pred EccCCCCEEEEEecCceEEEEECC
Q psy9598 772 SHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 772 ~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
|.|...++|++||.||.|++|.+.
T Consensus 288 w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 288 WNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EcCCCCCceeecCCCceEEEEEec
Confidence 999557899999999999999874
No 25
>KOG0315|consensus
Probab=100.00 E-value=1e-30 Score=279.27 Aligned_cols=283 Identities=15% Similarity=0.221 Sum_probs=236.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccc
Q psy9598 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 609 (1915)
Q Consensus 530 g~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~ 609 (1915)
.-+|||+|.|.+||+|...+|.|..++....+.|+.+...|+ +..|++++. -.|++||++++.......
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpd----k~~LAaa~~-qhvRlyD~~S~np~Pv~t------ 78 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPD----KKDLAAAGN-QHVRLYDLNSNNPNPVAT------ 78 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCC----cchhhhccC-CeeEEEEccCCCCCceeE------
Confidence 348999999999999999999999999988889999999995 477777775 569999999886433333
Q ss_pred cccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q psy9598 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 689 (1915)
Q Consensus 610 ~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~I 689 (1915)
+.+|...|.++.|..+|+++++|+.||+++|||++. +. ......|..+|++|..+|+...|++|..+|.|+|
T Consensus 79 ----~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~---~~-~qR~~~~~spVn~vvlhpnQteLis~dqsg~irv 150 (311)
T KOG0315|consen 79 ----FEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRS---LS-CQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRV 150 (311)
T ss_pred ----EeccCCceEEEEEeecCeEEEecCCCceEEEEeccC---cc-cchhccCCCCcceEEecCCcceEEeecCCCcEEE
Confidence 336778999999999999999999999999999964 22 2233467899999999999999999999999999
Q ss_pred EEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC------ceEEEeeCC
Q psy9598 690 WYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG------DLVQVLKGH 763 (1915)
Q Consensus 690 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg------~~i~~l~gH 763 (1915)
||+....+.... .......|.+++..++|.+|+++.+ .|.+++|++-+. .++..++.|
T Consensus 151 WDl~~~~c~~~l---------------iPe~~~~i~sl~v~~dgsml~a~nn-kG~cyvW~l~~~~~~s~l~P~~k~~ah 214 (311)
T KOG0315|consen 151 WDLGENSCTHEL---------------IPEDDTSIQSLTVMPDGSMLAAANN-KGNCYVWRLLNHQTASELEPVHKFQAH 214 (311)
T ss_pred EEccCCcccccc---------------CCCCCcceeeEEEcCCCcEEEEecC-CccEEEEEccCCCccccceEhhheecc
Confidence 999877643311 1113367899999999999999988 999999998754 467778999
Q ss_pred CCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 764 TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 764 ~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
.+.+..+.+|| ++.+|||+|.|.+++||++.+. ......+. .|...+++++||.||.+|++|+.|+.+++|++
T Consensus 215 ~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~-~kle~~l~-----gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 215 NGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDF-FKLELVLT-----GHQRWVWDCAFSADGEYLVTASSDHTARLWDL 287 (311)
T ss_pred cceEEEEEECC-CCcEEEeecCCceEEEEecCCc-eeeEEEee-----cCCceEEeeeeccCccEEEecCCCCceeeccc
Confidence 99999999999 9999999999999999999876 21122222 46689999999999999999999999999999
Q ss_pred CCCcccccCCC
Q psy9598 844 GGFKRPQNIPR 854 (1915)
Q Consensus 844 ~s~~~~~~l~~ 854 (1915)
..++.+...+.
T Consensus 288 ~~~k~v~qy~g 298 (311)
T KOG0315|consen 288 SAGKEVRQYQG 298 (311)
T ss_pred ccCceeeecCC
Confidence 99887665544
No 26
>KOG0282|consensus
Probab=99.98 E-value=6.7e-32 Score=312.63 Aligned_cols=299 Identities=21% Similarity=0.291 Sum_probs=251.0
Q ss_pred ceeeeEEecCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCC-CcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcE
Q psy9598 465 NLRQHYVNLGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARD-GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTI 542 (1915)
Q Consensus 465 ~~~~~~~l~gH~~~V~~vafsp-dg~~LaTGs~Dg~I~IWd~~t-g~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtI 542 (1915)
.-++++++.||+..|+++.|.| .+.+|++|+.|+.|+||++.. +.++++|.||..+|.+++|+.+|..++|+|.|+.|
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~l 282 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFL 282 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceee
Confidence 3455678899999999999999 899999999999999999877 89999999999999999999999999999999999
Q ss_pred EEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceE
Q psy9598 543 RIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 543 rVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 622 (1915)
++||++||+++..+. ....++|+.|+|+. .+.+++|+.|+.|+.||++++..+.... .|-+.|.
T Consensus 283 KlwDtETG~~~~~f~-~~~~~~cvkf~pd~---~n~fl~G~sd~ki~~wDiRs~kvvqeYd------------~hLg~i~ 346 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFH-LDKVPTCVKFHPDN---QNIFLVGGSDKKIRQWDIRSGKVVQEYD------------RHLGAIL 346 (503)
T ss_pred eeeccccceEEEEEe-cCCCceeeecCCCC---CcEEEEecCCCcEEEEeccchHHHHHHH------------hhhhhee
Confidence 999999999999885 24567999999953 5899999999999999999997544433 3457899
Q ss_pred EEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 623 ~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
.+.|-++|..+++.+.|++|+||+.+..-....+. ..+...+.+|..+|++.+|++-+.|..|.||.+...-. +
T Consensus 347 ~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~--~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r----~ 420 (503)
T KOG0282|consen 347 DITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIA--DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFR----L 420 (503)
T ss_pred eeEEccCCceEeeeccCccEEEEEcCCCccchhhc--chhhccCcceecCCCCCeehhhccCceEEEEecccccc----c
Confidence 99999999999999999999999984332222222 22334567889999999999999999999997542110 0
Q ss_pred cccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEE
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaS 782 (1915)
.. ..........+.-..|.|||||.+|++|.+ ||.+.+||..+.+++..+++|.+.+..+.|||.....+||
T Consensus 421 nk-------kK~feGh~vaGys~~v~fSpDG~~l~SGds-dG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat 492 (503)
T KOG0282|consen 421 NK-------KKRFEGHSVAGYSCQVDFSPDGRTLCSGDS-DGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVAT 492 (503)
T ss_pred CH-------hhhhcceeccCceeeEEEcCCCCeEEeecC-CccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEe
Confidence 00 000111112345567899999999999999 9999999999999999999999999999999988899999
Q ss_pred EecCceEEEEE
Q psy9598 783 AGHDGLIIIWD 793 (1915)
Q Consensus 783 gs~DG~I~IWd 793 (1915)
||.||.|+||+
T Consensus 493 ~~w~G~Ikiwd 503 (503)
T KOG0282|consen 493 CGWDGLIKIWD 503 (503)
T ss_pred cccCceeEecC
Confidence 99999999996
No 27
>KOG0306|consensus
Probab=99.98 E-value=7.2e-30 Score=307.07 Aligned_cols=400 Identities=18% Similarity=0.262 Sum_probs=315.5
Q ss_pred CccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEE
Q psy9598 445 SREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524 (1915)
Q Consensus 445 ~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~L 524 (1915)
||.++++..-.+.+|+.....+.....+..-...|+|+.-+++.-+||+|-.||.|+||+..++..+.++.||...|++|
T Consensus 34 Gr~va~~a~E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l 113 (888)
T KOG0306|consen 34 GRAVAVSALEQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTL 113 (888)
T ss_pred CcEEEEeccccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEE
Confidence 77788878888899987766444444444555799999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceec
Q psy9598 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF 604 (1915)
Q Consensus 525 afspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~ 604 (1915)
.|+..|..|||||.|+.|.|||+-.-.-+..+.||...|+..-|.. +..+|+++|.|+.|++||+.+..+..+...
T Consensus 114 ~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~----~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd 189 (888)
T KOG0306|consen 114 KFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLN----GDSFLVSVSKDSMIKFWDLETQHCFETHVD 189 (888)
T ss_pred EEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccC----CCeEEEEeccCceEEEEecccceeeeEEec
Confidence 9999999999999999999999988788899999999999999986 348999999999999999998876554443
Q ss_pred cCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEe-------------------------------------
Q psy9598 605 HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM------------------------------------- 647 (1915)
Q Consensus 605 ~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl------------------------------------- 647 (1915)
|.+.++.+++.+ +.+++++.|+.++||++
T Consensus 190 ------------~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s 255 (888)
T KOG0306|consen 190 ------------HRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFS 255 (888)
T ss_pred ------------ccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCc
Confidence 345566666655 45666666666666665
Q ss_pred --------------------------------------------------------------------------------
Q psy9598 648 -------------------------------------------------------------------------------- 647 (1915)
Q Consensus 648 -------------------------------------------------------------------------------- 647 (1915)
T Consensus 256 ~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~ 335 (888)
T KOG0306|consen 256 DRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTE 335 (888)
T ss_pred ccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcc
Confidence
Q ss_pred ----------------cCCCC--C----ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeeccc
Q psy9598 648 ----------------DGVDS--P----LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705 (1915)
Q Consensus 648 ----------------~~~~~--~----~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~ 705 (1915)
..... + .....+.+|...|.++++|.+...++|| ..+.|+||+..+.+++...
T Consensus 336 ~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sg-a~~SikiWn~~t~kciRTi---- 410 (888)
T KOG0306|consen 336 NTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASG-AGESIKIWNRDTLKCIRTI---- 410 (888)
T ss_pred eeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeec-CCCcEEEEEccCcceeEEe----
Confidence 10000 0 0013456788899999999887666665 5578999999998877643
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEec
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~ 785 (1915)
....+.+..|-|.++++++|.. .|.+.|||+.+..++-++.+|.+.|++++.+| |+..++|||.
T Consensus 411 --------------~~~y~l~~~Fvpgd~~Iv~G~k-~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~p-D~~g~vT~sa 474 (888)
T KOG0306|consen 411 --------------TCGYILASKFVPGDRYIVLGTK-NGELQVFDLASASLVETIRAHDGAIWSISLSP-DNKGFVTGSA 474 (888)
T ss_pred --------------ccccEEEEEecCCCceEEEecc-CCceEEEEeehhhhhhhhhccccceeeeeecC-CCCceEEecC
Confidence 2337888999999999999998 99999999999999999999999999999999 9999999999
Q ss_pred CceEEEEECCCC-----ccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccC-----CC-
Q psy9598 786 DGLIIIWDILSS-----KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNI-----PR- 854 (1915)
Q Consensus 786 DG~I~IWdl~s~-----~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l-----~~- 854 (1915)
|.+|++||..-- .......+.....-.-...|.|+.+||||.+||++--|.+|.||-+++-+.+.++ |.
T Consensus 475 DktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~ 554 (888)
T KOG0306|consen 475 DKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVL 554 (888)
T ss_pred CcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeeccccccee
Confidence 999999997421 1100111110001112357999999999999999999999999999998766444 33
Q ss_pred ceeecCCCCeeeecCC-CccceeecccCCC
Q psy9598 855 ELFFHTDYRTLNRPNG-LFEPTYDEVTNLP 883 (1915)
Q Consensus 855 ~~~F~~d~~~Lv~~~~-~~~~v~D~~t~~~ 883 (1915)
.+-.++|+..++..+. -.+.+|-..=+++
T Consensus 555 smDIS~DSklivTgSADKnVKiWGLdFGDC 584 (888)
T KOG0306|consen 555 SMDISPDSKLIVTGSADKNVKIWGLDFGDC 584 (888)
T ss_pred EEeccCCcCeEEeccCCCceEEeccccchh
Confidence 6778899999986553 3367887655543
No 28
>KOG0281|consensus
Probab=99.98 E-value=4e-32 Score=300.12 Aligned_cols=277 Identities=25% Similarity=0.482 Sum_probs=242.2
Q ss_pred CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEE
Q psy9598 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS 554 (1915)
Q Consensus 475 H~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~ 554 (1915)
...+|+|+.++ ...+++|..|.+|+|||..+..++..+.||++.|.||.|. .+.|++||.|.+|+|||+++|+++.
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhh
Confidence 45789999998 5689999999999999999999999999999999999985 4599999999999999999999999
Q ss_pred EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEE
Q psy9598 555 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 634 (1915)
Q Consensus 555 ~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~La 634 (1915)
++.+|...|..+.|+. .+++++|.|.+|.+||+.....+ .....+.+|...|+.+.|+. ++|+
T Consensus 272 tlihHceaVLhlrf~n------g~mvtcSkDrsiaVWdm~sps~i---------t~rrVLvGHrAaVNvVdfd~--kyIV 334 (499)
T KOG0281|consen 272 TLIHHCEAVLHLRFSN------GYMVTCSKDRSIAVWDMASPTDI---------TLRRVLVGHRAAVNVVDFDD--KYIV 334 (499)
T ss_pred HHhhhcceeEEEEEeC------CEEEEecCCceeEEEeccCchHH---------HHHHHHhhhhhheeeecccc--ceEE
Confidence 9999999999999986 79999999999999999876422 23344567889999999965 4999
Q ss_pred EEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccc
Q psy9598 635 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKET 714 (1915)
Q Consensus 635 sgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~ 714 (1915)
+++.|.+|++|++ .+...+.++.+|...|.|+++ .|+++++||.|.+|++||+..|.+..
T Consensus 335 sASgDRTikvW~~---st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLR--------------- 394 (499)
T KOG0281|consen 335 SASGDRTIKVWST---STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR--------------- 394 (499)
T ss_pred EecCCceEEEEec---cceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHH---------------
Confidence 9999999999999 566778889999999999987 58899999999999999999988554
Q ss_pred cccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc---------eEEEeeCCCCCeEEEEEccCCCCEEEEEec
Q psy9598 715 SDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD---------LVQVLKGHTNEVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 715 ~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~---------~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~ 785 (1915)
...+|..-|.|+.|+ ...|++|+. ||.|+|||+.++. |+.++..|++.|+.+.|. ...++++++
T Consensus 395 -vLeGHEeLvRciRFd--~krIVSGaY-DGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD---~fqIvsssH 467 (499)
T KOG0281|consen 395 -VLEGHEELVRCIRFD--NKRIVSGAY-DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD---EFQIISSSH 467 (499)
T ss_pred -HHhchHHhhhheeec--Cceeeeccc-cceEEEEecccccCCcccccchHHHhhhhccceeEEEeec---ceEEEeccC
Confidence 234678889999995 677888887 9999999998653 556677899999999994 488999999
Q ss_pred CceEEEEECCCCcc
Q psy9598 786 DGLIIIWDILSSKQ 799 (1915)
Q Consensus 786 DG~I~IWdl~s~~~ 799 (1915)
|.+|.|||+..+-.
T Consensus 468 ddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 468 DDTILIWDFLNGPP 481 (499)
T ss_pred CCeEEEEEcCCCCc
Confidence 99999999987755
No 29
>KOG0263|consensus
Probab=99.98 E-value=1.1e-30 Score=319.70 Aligned_cols=247 Identities=20% Similarity=0.357 Sum_probs=217.7
Q ss_pred EecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-------------------------------CcEEEEEeCCCC
Q psy9598 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD-------------------------------GKLLATLRGCSG 519 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t-------------------------------g~~~~~l~gH~~ 519 (1915)
++.--...|+|+.|++++.+||.|..|..|++|.+.. +....++.||++
T Consensus 373 T~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~G 452 (707)
T KOG0263|consen 373 TFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSG 452 (707)
T ss_pred EEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCC
Confidence 3333447899999999999999999999999999762 113456889999
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccc
Q psy9598 520 EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 599 (1915)
Q Consensus 520 ~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~ 599 (1915)
+|..+.|+|+.++|+++|.|++||+|.+.+..++..+.||..+|+++.|+|. |.++||||.|++.++|.......+
T Consensus 453 PVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~----GyYFatas~D~tArLWs~d~~~Pl 528 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPR----GYYFATASHDQTARLWSTDHNKPL 528 (707)
T ss_pred ceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCC----ceEEEecCCCceeeeeecccCCch
Confidence 9999999999999999999999999999999999999999999999999995 499999999999999987664322
Q ss_pred cceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEE
Q psy9598 600 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 679 (1915)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~ 679 (1915)
..+.+|.+.|.|+.|+|+..++++|+.|.+|++||+ ..+..+..+.||.++|.+|+|||+|.+|+
T Consensus 529 ------------RifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv---~~G~~VRiF~GH~~~V~al~~Sp~Gr~La 593 (707)
T KOG0263|consen 529 ------------RIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDV---STGNSVRIFTGHKGPVTALAFSPCGRYLA 593 (707)
T ss_pred ------------hhhcccccccceEEECCcccccccCCCCceEEEEEc---CCCcEEEEecCCCCceEEEEEcCCCceEe
Confidence 233467799999999999999999999999999999 44556778899999999999999999999
Q ss_pred EEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC
Q psy9598 680 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN 753 (1915)
Q Consensus 680 sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t 753 (1915)
+|+.||.|.|||+.++..+ ....+|.+.|.++.|+.+|..|++++. |++|++||+..
T Consensus 594 Sg~ed~~I~iWDl~~~~~v----------------~~l~~Ht~ti~SlsFS~dg~vLasgg~-DnsV~lWD~~~ 650 (707)
T KOG0263|consen 594 SGDEDGLIKIWDLANGSLV----------------KQLKGHTGTIYSLSFSRDGNVLASGGA-DNSVRLWDLTK 650 (707)
T ss_pred ecccCCcEEEEEcCCCcch----------------hhhhcccCceeEEEEecCCCEEEecCC-CCeEEEEEchh
Confidence 9999999999999987632 234567899999999999999999999 99999999854
No 30
>KOG0273|consensus
Probab=99.97 E-value=3.1e-30 Score=297.23 Aligned_cols=310 Identities=22% Similarity=0.327 Sum_probs=263.8
Q ss_pred ccccccCCCeEEEecccC--Cceeee------EEecCC----CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy9598 446 REYSGPLSRSLMISSHKY--SNLRQH------YVNLGH----LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT 513 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~--~~~~~~------~~l~gH----~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~ 513 (1915)
-...|+.+-+.++|.... .....+ ..+.|+ +..|+|++|+.+|.+||||+.||.++||+. +|.++.+
T Consensus 193 llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~t 271 (524)
T KOG0273|consen 193 LLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLIST 271 (524)
T ss_pred hhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEec-Cchhhhh
Confidence 344567777777776542 111111 111233 257999999999999999999999999996 7889999
Q ss_pred EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEec
Q psy9598 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593 (1915)
Q Consensus 514 l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl 593 (1915)
|..|.++|.+|.|+..|++|++|+.|+++.|||..+|.....+.-|..+-..|.|-. ...+++++.||.|+++.+
T Consensus 272 l~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~-----~~~F~ts~td~~i~V~kv 346 (524)
T KOG0273|consen 272 LGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQS-----NDEFATSSTDGCIHVCKV 346 (524)
T ss_pred hhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEec-----CceEeecCCCceEEEEEe
Confidence 999999999999999999999999999999999999999999998998877888875 368999999999999988
Q ss_pred ccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC
Q psy9598 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 673 (1915)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp 673 (1915)
.......+ +.+|.+.|.++.|+|.|.+|++++.|++++||.+ ........+.+|...|..+.|+|
T Consensus 347 ~~~~P~~t------------~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~---~~~~~~~~l~~Hskei~t~~wsp 411 (524)
T KOG0273|consen 347 GEDRPVKT------------FIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSM---GQSNSVHDLQAHSKEIYTIKWSP 411 (524)
T ss_pred cCCCccee------------eecccCceEEEEECCCCceEEEecCCCeeEeeec---CCCcchhhhhhhccceeeEeecC
Confidence 76543322 3357899999999999999999999999999998 34456677899999999999999
Q ss_pred CC---------CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC
Q psy9598 674 SH---------LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 744 (1915)
Q Consensus 674 dg---------~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg 744 (1915)
.| ..+++++.|++|++||+..+.++.. +..|..+|.+|+|+|+|+++++|+. ||
T Consensus 412 ~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~----------------f~kH~~pVysvafS~~g~ylAsGs~-dg 474 (524)
T KOG0273|consen 412 TGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHT----------------LMKHQEPVYSVAFSPNGRYLASGSL-DG 474 (524)
T ss_pred CCCccCCCcCCceEEEeecCCeEEEEEccCCceeEe----------------eccCCCceEEEEecCCCcEEEecCC-CC
Confidence 75 4799999999999999999886653 3458889999999999999999998 99
Q ss_pred eEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 745 ~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
.|.+|+..++++++.+.+.. .|+.|+|+- +|.+|..+-.||.+++-|++
T Consensus 475 ~V~iws~~~~~l~~s~~~~~-~Ifel~Wn~-~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 475 CVHIWSTKTGKLVKSYQGTG-GIFELCWNA-AGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred eeEeccccchheeEeecCCC-eEEEEEEcC-CCCEEEEEecCCCceEEEec
Confidence 99999999999999998655 499999998 88999999999999999874
No 31
>KOG0296|consensus
Probab=99.97 E-value=4.4e-30 Score=288.45 Aligned_cols=309 Identities=20% Similarity=0.273 Sum_probs=262.8
Q ss_pred cccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEE
Q psy9598 447 EYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526 (1915)
Q Consensus 447 ~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Laf 526 (1915)
..+|+.|....+|...... ....+.||..+|+|+.|+.+|.+||||..+|.|+||...++.....+....+.|.-|.|
T Consensus 79 ~aTGGgDD~AflW~~~~ge--~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~W 156 (399)
T KOG0296|consen 79 VATGGGDDLAFLWDISTGE--FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKW 156 (399)
T ss_pred EEecCCCceEEEEEccCCc--ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEe
Confidence 4578899999999876665 56789999999999999999999999999999999999999999998777788999999
Q ss_pred eCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccC
Q psy9598 527 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606 (1915)
Q Consensus 527 spdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~ 606 (1915)
+|.+.+|++|+.||.|.+|.+.++.....+.||..++++=.|.|+ |..++++..||+|++|++.++..+......
T Consensus 157 Hp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pd----GKr~~tgy~dgti~~Wn~ktg~p~~~~~~~- 231 (399)
T KOG0296|consen 157 HPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPD----GKRILTGYDDGTIIVWNPKTGQPLHKITQA- 231 (399)
T ss_pred cccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCC----CceEEEEecCceEEEEecCCCceeEEeccc-
Confidence 999999999999999999999998889999999999999999994 599999999999999999999655444322
Q ss_pred ccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEe--------ccCCCCeeEEE---EcCCC
Q psy9598 607 PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV--------EEHSDKVDSIQ---WSHSH 675 (1915)
Q Consensus 607 ~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l--------~~h~~~V~sl~---fspdg 675 (1915)
......|+.++..+..++.|+.++.+++-+... ...+... ..+...+.||. |+..-
T Consensus 232 ----------e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~s---gKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~l 298 (399)
T KOG0296|consen 232 ----------EGLELPCISLNLAGSTLTKGNSEGVACGVNNGS---GKVVNCNNGTVPELKPSQEELDESVESIPSSSKL 298 (399)
T ss_pred ----------ccCcCCccccccccceeEeccCCccEEEEcccc---ceEEEecCCCCccccccchhhhhhhhhccccccc
Confidence 124567889999999999999998888877522 2222222 23444455554 44455
Q ss_pred CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc
Q psy9598 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD 755 (1915)
Q Consensus 676 ~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~ 755 (1915)
.++++|+.||+|.|||+.....+.+ ..|...|+.+.|.+ ..+|++++. +|.|++||.++|+
T Consensus 299 pL~A~G~vdG~i~iyD~a~~~~R~~-----------------c~he~~V~~l~w~~-t~~l~t~c~-~g~v~~wDaRtG~ 359 (399)
T KOG0296|consen 299 PLAACGSVDGTIAIYDLAASTLRHI-----------------CEHEDGVTKLKWLN-TDYLLTACA-NGKVRQWDARTGQ 359 (399)
T ss_pred chhhcccccceEEEEecccchhhee-----------------ccCCCceEEEEEcC-cchheeecc-CceEEeeeccccc
Confidence 6889999999999999987764432 23667799999999 889999998 9999999999999
Q ss_pred eEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 756 LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 756 ~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
++.++.||...|.+++++| +.++++|+|.|++.+||++.
T Consensus 360 l~~~y~GH~~~Il~f~ls~-~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 360 LKFTYTGHQMGILDFALSP-QKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred eEEEEecCchheeEEEEcC-CCcEEEEecCCCeEEEEecC
Confidence 9999999999999999999 99999999999999999874
No 32
>KOG0284|consensus
Probab=99.97 E-value=1.6e-31 Score=303.02 Aligned_cols=285 Identities=17% Similarity=0.292 Sum_probs=248.5
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI 597 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~ 597 (1915)
...|..|.|.|+|+.|++|+..|.+.+|+..+...-..++.|...|.++.|++ ++.++++|+.+|.|++|+..-..
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~----~g~wmiSgD~gG~iKyWqpnmnn 171 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSH----NGTWMISGDKGGMIKYWQPNMNN 171 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEcc----CCCEEEEcCCCceEEecccchhh
Confidence 45799999999999999999999999999877666667789999999999998 45999999999999999876442
Q ss_pred cccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCE
Q psy9598 598 DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 677 (1915)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~ 677 (1915)
... ....|...|.|++|+|+...+++++.||+|+|||... +..-..+.+|.-.|.++.|+|...+
T Consensus 172 Vk~------------~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~---~kee~vL~GHgwdVksvdWHP~kgL 236 (464)
T KOG0284|consen 172 VKI------------IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM---PKEERVLRGHGWDVKSVDWHPTKGL 236 (464)
T ss_pred hHH------------hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccC---CchhheeccCCCCcceeccCCccce
Confidence 110 1113448899999999999999999999999999843 3333456899999999999999999
Q ss_pred EEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceE
Q psy9598 678 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLV 757 (1915)
Q Consensus 678 L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i 757 (1915)
|++||.|..|++||.+++.|+. ....|...|..+.|++++.+|++++. |..++++|+++.+.+
T Consensus 237 iasgskDnlVKlWDprSg~cl~----------------tlh~HKntVl~~~f~~n~N~Llt~sk-D~~~kv~DiR~mkEl 299 (464)
T KOG0284|consen 237 IASGSKDNLVKLWDPRSGSCLA----------------TLHGHKNTVLAVKFNPNGNWLLTGSK-DQSCKVFDIRTMKEL 299 (464)
T ss_pred eEEccCCceeEeecCCCcchhh----------------hhhhccceEEEEEEcCCCCeeEEccC-CceEEEEehhHhHHH
Confidence 9999999999999999998654 24468899999999999999999998 999999999999999
Q ss_pred EEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCe
Q psy9598 758 QVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGH 837 (1915)
Q Consensus 758 ~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~ 837 (1915)
.++++|...|+++.|||....+|++||.||.|..|.+....+ +.. +...|.+.|++++|+|=|.+||+|+.|.+
T Consensus 300 ~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p--~~~----i~~AHd~~iwsl~~hPlGhil~tgsnd~t 373 (464)
T KOG0284|consen 300 FTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP--LGE----IPPAHDGEIWSLAYHPLGHILATGSNDRT 373 (464)
T ss_pred HHhhcchhhheeeccccccccceeeccCCCceEEEecccccc--ccC----CCcccccceeeeeccccceeEeecCCCcc
Confidence 999999999999999999999999999999999999985555 222 33467789999999999999999999999
Q ss_pred EEEEeCC
Q psy9598 838 LLVYGLG 844 (1915)
Q Consensus 838 I~Iwdl~ 844 (1915)
+++|.-.
T Consensus 374 ~rfw~r~ 380 (464)
T KOG0284|consen 374 VRFWTRN 380 (464)
T ss_pred eeeeccC
Confidence 9999744
No 33
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=2.4e-29 Score=298.25 Aligned_cols=287 Identities=31% Similarity=0.526 Sum_probs=251.8
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t 549 (1915)
.+|.+|.+.|+|++|+|++.+|++|+.||.|.+|++.++.....+.+|...|.++.|++++.+|++++.||.|++|++.+
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~ 82 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET 82 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc
Confidence 46779999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC
Q psy9598 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629 (1915)
Q Consensus 550 g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd 629 (1915)
+..+..+..|...|.++.|++. +.++++++.+|.|.+||+.++.....+ ..|...+.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~ 146 (289)
T cd00200 83 GECVRTLTGHTSYVSSVAFSPD----GRILSSSSRDKTIKVWDVETGKCLTTL------------RGHTDWVNSVAFSPD 146 (289)
T ss_pred ccceEEEeccCCcEEEEEEcCC----CCEEEEecCCCeEEEEECCCcEEEEEe------------ccCCCcEEEEEEcCc
Confidence 8889999999999999999984 478888888999999999865432221 245678999999999
Q ss_pred CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCC
Q psy9598 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 709 (1915)
Q Consensus 630 g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~ 709 (1915)
+.+|++++.+|.|++||+.. ...+..+..|...|.+++|++++..|++++.||.|++||+..+.....
T Consensus 147 ~~~l~~~~~~~~i~i~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~--------- 214 (289)
T cd00200 147 GTFVASSSQDGTIKLWDLRT---GKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGT--------- 214 (289)
T ss_pred CCEEEEEcCCCcEEEEEccc---cccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecc---------
Confidence 99999888899999999942 344556678888999999999999999999999999999987653321
Q ss_pred CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceE
Q psy9598 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 789 (1915)
Q Consensus 710 ~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I 789 (1915)
...+...+.+++|++++.++++++. +|.|++|++.++..+..+.+|...|.+++|++ ++.+|++++.||.|
T Consensus 215 -------~~~~~~~i~~~~~~~~~~~~~~~~~-~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i 285 (289)
T cd00200 215 -------LRGHENGVNSVAFSPDGYLLASGSE-DGTIRVWDLRTGECVQTLSGHTNSVTSLAWSP-DGKRLASGSADGTI 285 (289)
T ss_pred -------hhhcCCceEEEEEcCCCcEEEEEcC-CCcEEEEEcCCceeEEEccccCCcEEEEEECC-CCCEEEEecCCCeE
Confidence 1135568999999999888888876 99999999999999999999999999999999 88999999999999
Q ss_pred EEEE
Q psy9598 790 IIWD 793 (1915)
Q Consensus 790 ~IWd 793 (1915)
++|+
T Consensus 286 ~iw~ 289 (289)
T cd00200 286 RIWD 289 (289)
T ss_pred EecC
Confidence 9996
No 34
>KOG0284|consensus
Probab=99.97 E-value=2.7e-31 Score=301.11 Aligned_cols=283 Identities=17% Similarity=0.314 Sum_probs=244.3
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEE
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~ 555 (1915)
..+|..|.|.|+|+.|+||+..|.+.+|+..+...-..+..|...|.++.|+++|.+++||+.+|.|++|+..-. .+..
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~ 174 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKI 174 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhHH
Confidence 468999999999999999999999999998665555567899999999999999999999999999999998643 3445
Q ss_pred eecC-CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEE
Q psy9598 556 LVGH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 634 (1915)
Q Consensus 556 l~~h-~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~La 634 (1915)
+.+| ...|.+++|+|.. ..|++||.||+|+|||....... ..+.+|.-.|.|+.|+|...+|+
T Consensus 175 ~~ahh~eaIRdlafSpnD----skF~t~SdDg~ikiWdf~~~kee------------~vL~GHgwdVksvdWHP~kgLia 238 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPND----SKFLTCSDDGTIKIWDFRMPKEE------------RVLRGHGWDVKSVDWHPTKGLIA 238 (464)
T ss_pred hhHhhhhhhheeccCCCC----ceeEEecCCCeEEEEeccCCchh------------heeccCCCCcceeccCCccceeE
Confidence 5554 4899999999943 79999999999999998765432 22357788999999999999999
Q ss_pred EEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccc
Q psy9598 635 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKET 714 (1915)
Q Consensus 635 sgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~ 714 (1915)
+||.|..|++||. .+..++.++.+|...|..+.|++++++|+++|.|..++++|+++.+- .
T Consensus 239 sgskDnlVKlWDp---rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkE----------------l 299 (464)
T KOG0284|consen 239 SGSKDNLVKLWDP---RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKE----------------L 299 (464)
T ss_pred EccCCceeEeecC---CCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHH----------------H
Confidence 9999999999998 55678889999999999999999999999999999999999985541 1
Q ss_pred cccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-CCCCCeEEEEEccCCCCEEEEEecCceEEEEE
Q psy9598 715 SDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793 (1915)
Q Consensus 715 ~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWd 793 (1915)
....+|...|++++|+|-..-|++.+..||.|..|.+...+++..+. +|...|++++||| -|.+|++|+.|.++++|.
T Consensus 300 ~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hP-lGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 300 FTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHP-LGHILATGSNDRTVRFWT 378 (464)
T ss_pred HHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccc-cceeEeecCCCcceeeec
Confidence 23456889999999999877766666669999999998666666554 8999999999999 999999999999999997
Q ss_pred CC
Q psy9598 794 IL 795 (1915)
Q Consensus 794 l~ 795 (1915)
-.
T Consensus 379 r~ 380 (464)
T KOG0284|consen 379 RN 380 (464)
T ss_pred cC
Confidence 53
No 35
>KOG0276|consensus
Probab=99.97 E-value=2.2e-29 Score=296.93 Aligned_cols=288 Identities=17% Similarity=0.275 Sum_probs=257.5
Q ss_pred eeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC
Q psy9598 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 547 (1915)
Q Consensus 468 ~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl 547 (1915)
..+.+..|+..|-||.|+|...+++++-..|.|.|||..+...+.+|.-..-+|.+..|-...+++++|+.|..|+||+.
T Consensus 5 ~krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfny 84 (794)
T KOG0276|consen 5 FKRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNY 84 (794)
T ss_pred hhhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEec
Confidence 34567779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEEC
Q psy9598 548 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 627 (1915)
Q Consensus 548 ~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs 627 (1915)
.|+..+..|..|.+-|.||+.+|.. .+++++|.|-+|++||+...-. ....+.+|...|.+++|+
T Consensus 85 nt~ekV~~FeAH~DyIR~iavHPt~----P~vLtsSDDm~iKlW~we~~wa-----------~~qtfeGH~HyVMqv~fn 149 (794)
T KOG0276|consen 85 NTGEKVKTFEAHSDYIRSIAVHPTL----PYVLTSSDDMTIKLWDWENEWA-----------CEQTFEGHEHYVMQVAFN 149 (794)
T ss_pred ccceeeEEeeccccceeeeeecCCC----CeEEecCCccEEEEeeccCcee-----------eeeEEcCcceEEEEEEec
Confidence 9999999999999999999999965 7999999999999999986532 223455788999999999
Q ss_pred C-CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC--CEEEEEeCCCcEEEEEccCCceEEeeecc
Q psy9598 628 P-GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH--LRFVSGSRDGTALIWYYKCSQWRFIRLDM 704 (1915)
Q Consensus 628 p-dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg--~~L~sgs~DG~I~IWDl~~~~~~~~~~~~ 704 (1915)
| |.+.+|+++-|++|+||.+ +.+.+.+++.+|...|+||.|-+.| .+|+||+.|.+|+|||+++..|+.
T Consensus 150 PkD~ntFaS~sLDrTVKVWsl---gs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~----- 221 (794)
T KOG0276|consen 150 PKDPNTFASASLDRTVKVWSL---GSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQ----- 221 (794)
T ss_pred CCCccceeeeeccccEEEEEc---CCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHH-----
Confidence 9 5678999999999999999 5667788899999999999998766 499999999999999999887553
Q ss_pred cccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEe
Q psy9598 705 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG 784 (1915)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs 784 (1915)
...+|...|..++|+|.-..|++|+. ||+++||+..|.++..++.-.-..|+||+..+ .++.++.|.
T Consensus 222 -----------TLeGHt~Nvs~v~fhp~lpiiisgsE-DGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k-~~~~i~vG~ 288 (794)
T KOG0276|consen 222 -----------TLEGHTNNVSFVFFHPELPIIISGSE-DGTVRIWNSKTYKLEKTLNYGLERVWCIAAHK-GDGKIAVGF 288 (794)
T ss_pred -----------HhhcccccceEEEecCCCcEEEEecC-CccEEEecCcceehhhhhhcCCceEEEEeecC-CCCeEEEec
Confidence 34568899999999999999999998 99999999999998888887778899999988 666788887
Q ss_pred cCceEEE
Q psy9598 785 HDGLIII 791 (1915)
Q Consensus 785 ~DG~I~I 791 (1915)
..|.|.|
T Consensus 289 Deg~i~v 295 (794)
T KOG0276|consen 289 DEGSVTV 295 (794)
T ss_pred cCCcEEE
Confidence 7776643
No 36
>KOG0292|consensus
Probab=99.97 E-value=1.6e-29 Score=307.11 Aligned_cols=340 Identities=20% Similarity=0.352 Sum_probs=277.0
Q ss_pred ecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Q psy9598 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 551 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~ 551 (1915)
+...+..|-.++|+|...+|+++-..|.|.+||..-+.++..|..|.++|..|+|+|++.+++||+.|..|+||+..+.+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr 84 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR 84 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCc
Q psy9598 552 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL 631 (1915)
Q Consensus 552 ~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~ 631 (1915)
|+.++.||-+.|..+.|++.- .+++++|.|.||+||++.+..++..+. +|...|.|..|+|...
T Consensus 85 clftL~GHlDYVRt~~FHhey----PWIlSASDDQTIrIWNwqsr~~iavlt------------GHnHYVMcAqFhptED 148 (1202)
T KOG0292|consen 85 CLFTLLGHLDYVRTVFFHHEY----PWILSASDDQTIRIWNWQSRKCIAVLT------------GHNHYVMCAQFHPTED 148 (1202)
T ss_pred ehhhhccccceeEEeeccCCC----ceEEEccCCCeEEEEeccCCceEEEEe------------cCceEEEeeccCCccc
Confidence 999999999999999999854 799999999999999999998766554 5578899999999999
Q ss_pred EEEEEeCCCeEEEEEecCCC--------------------------CCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC
Q psy9598 632 FLATGSGDHHVRVYKMDGVD--------------------------SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685 (1915)
Q Consensus 632 ~Lasgs~Dg~I~IwDl~~~~--------------------------~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG 685 (1915)
++++++-|.+|+|||+.+.. ....-+.+.||...|+-++|+|.-.+|+||+.|.
T Consensus 149 lIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDR 228 (1202)
T KOG0292|consen 149 LIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDR 228 (1202)
T ss_pred eEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcc
Confidence 99999999999999996321 0112245789999999999999999999999999
Q ss_pred cEEEEEccCCc-eEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCC
Q psy9598 686 TALIWYYKCSQ-WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 686 ~I~IWDl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~ 764 (1915)
.|++|.+...+ |. .....+|.+.|.++-|+|....|++.+. |++|+|||+.....++++....
T Consensus 229 qVKlWrmnetKaWE---------------vDtcrgH~nnVssvlfhp~q~lIlSnsE-DksirVwDm~kRt~v~tfrren 292 (1202)
T KOG0292|consen 229 QVKLWRMNETKAWE---------------VDTCRGHYNNVSSVLFHPHQDLILSNSE-DKSIRVWDMTKRTSVQTFRREN 292 (1202)
T ss_pred eeeEEEecccccee---------------ehhhhcccCCcceEEecCccceeEecCC-CccEEEEecccccceeeeeccC
Confidence 99999875432 22 1234568899999999999999999988 9999999999999999999888
Q ss_pred CCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc--------------ccceeeee---------ee--cCCCCcceEE
Q psy9598 765 NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ--------------RGYKWFHN---------IV--EGQGEGALFD 819 (1915)
Q Consensus 765 ~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~--------------~~~~~~~~---------~~--~~~~~~~V~~ 819 (1915)
+..+.|+.|| ..++++ +|+|+-+.||.+....+ +.+..+.- .+ .+....++.+
T Consensus 293 dRFW~laahP-~lNLfA-AgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~s 370 (1202)
T KOG0292|consen 293 DRFWILAAHP-ELNLFA-AGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRS 370 (1202)
T ss_pred CeEEEEEecC-Ccceee-eecCCceEEEEEcccCceEEEcCCEEEEEccceEEeeeccccccceeEeccCCCcccCCcce
Confidence 8899999999 777665 55666666777653222 00111100 00 0111357788
Q ss_pred EEEcCCCCEEEEE-e-CCCeEEEEeCCC
Q psy9598 820 GKWSPDGTTCALT-D-SYGHLLVYGLGG 845 (1915)
Q Consensus 820 vafSpdg~~Lasg-~-~dG~I~Iwdl~s 845 (1915)
+.++|..+.+..+ . ..|..-++.+..
T Consensus 371 msYNpae~~vlics~~~n~~y~L~~ipk 398 (1202)
T KOG0292|consen 371 LSYNPAENAVLICSNLDNGEYELVQIPK 398 (1202)
T ss_pred eeeccccCeEEEEeccCCCeEEEEEecC
Confidence 9999966554444 3 345556666553
No 37
>KOG0295|consensus
Probab=99.97 E-value=2.6e-30 Score=289.93 Aligned_cols=291 Identities=19% Similarity=0.283 Sum_probs=257.2
Q ss_pred cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeE
Q psy9598 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588 (1915)
Q Consensus 509 ~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI 588 (1915)
.+...+.||..+|+.+-|+|+-.++|+++.|++|++||+.+|++...++||++.|.+|+|+.. |.+|++++.|-.+
T Consensus 99 ~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~----Gk~l~tcSsDl~~ 174 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDAS----GKYLATCSSDLSA 174 (406)
T ss_pred CchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecC----ccEEEecCCccch
Confidence 466677899999999999999999999999999999999999999999999999999999974 4999999999999
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeE
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDS 668 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~s 668 (1915)
++||..+... ......+|...|.+++|-|.|.+|++++.|.+|+.|++ .+..++.++.+|...|..
T Consensus 175 ~LWd~~~~~~-----------c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~---~tg~cv~t~~~h~ewvr~ 240 (406)
T KOG0295|consen 175 KLWDFDTFFR-----------CIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWEC---DTGYCVKTFPGHSEWVRM 240 (406)
T ss_pred hheeHHHHHH-----------HHHHhcCcccceeeEEEEecCCeeeecccccceeEEec---ccceeEEeccCchHhEEE
Confidence 9999875311 11223456788999999999999999999999999999 567889999999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCC---------------C
Q psy9598 669 IQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDAS---------------D 733 (1915)
Q Consensus 669 l~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spd---------------g 733 (1915)
+..+.||.++++|+.|.+|++|-+.++++.. ....|...|-+++|-|. +
T Consensus 241 v~v~~DGti~As~s~dqtl~vW~~~t~~~k~----------------~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~ 304 (406)
T KOG0295|consen 241 VRVNQDGTIIASCSNDQTLRVWVVATKQCKA----------------ELREHEHPVECIAWAPESSYPSISEATGSTNGG 304 (406)
T ss_pred EEecCCeeEEEecCCCceEEEEEeccchhhh----------------hhhccccceEEEEecccccCcchhhccCCCCCc
Confidence 9999999999999999999999888876432 23446677777877653 2
Q ss_pred CEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCC
Q psy9598 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQG 813 (1915)
Q Consensus 734 ~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~ 813 (1915)
.++++++. |++|++||+.+|.++.+|.||.+.|..++|+| .|+||+++..|++|+|||+.+.++ ..++. .|
T Consensus 305 ~~l~s~Sr-DktIk~wdv~tg~cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~c--mk~~~-----ah 375 (406)
T KOG0295|consen 305 QVLGSGSR-DKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQC--MKTLE-----AH 375 (406)
T ss_pred cEEEeecc-cceEEEEeccCCeEEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEecccee--eeccC-----CC
Confidence 47777777 99999999999999999999999999999999 999999999999999999999988 66655 56
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9598 814 EGALFDGKWSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 814 ~~~V~~vafSpdg~~Lasg~~dG~I~Iwd 842 (1915)
...|+++.|+.+..++++|+.|..+.+|.
T Consensus 376 ~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 376 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred cceeEEEecCCCCceEEeccccceeeeee
Confidence 77899999999999999999999999996
No 38
>KOG0645|consensus
Probab=99.97 E-value=5.4e-29 Score=269.88 Aligned_cols=300 Identities=22% Similarity=0.340 Sum_probs=246.5
Q ss_pred cEEEEEeCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCC---CceEEEe-ecCCCCeEEEEeccCccCCCcEEEEEe
Q psy9598 509 KLLATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQT---LAPISVL-VGHQGIITGVNFCPLEVNGFNYLASTS 583 (1915)
Q Consensus 509 ~~~~~l~gH~~~I~~Lafspd-g~~LaSgs~DgtIrVWDl~t---g~~~~~l-~~h~~~V~sl~fsp~~~~d~~~L~sgs 583 (1915)
..++.+.||.+.|..++|+|. |..|||||.|+.|+||++.. ..+..++ .+|...|.+++|+|.+ ++|++||
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g----~~La~aS 80 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHG----RYLASAS 80 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCC----cEEEEee
Confidence 356788999999999999998 89999999999999999985 4455555 3699999999999954 8999999
Q ss_pred CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC
Q psy9598 584 TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663 (1915)
Q Consensus 584 ~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~ 663 (1915)
.|+++.||.-..+. ......+.+|...|.|++|+++|.+||+++.|..|-||.+.......++..+.+|+
T Consensus 81 FD~t~~Iw~k~~~e----------fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Ht 150 (312)
T KOG0645|consen 81 FDATVVIWKKEDGE----------FECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHT 150 (312)
T ss_pred ccceEEEeecCCCc----------eeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccc
Confidence 99999999755442 12234566889999999999999999999999999999998777788899999999
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEEcc-CCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEec
Q psy9598 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYK-CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF 742 (1915)
Q Consensus 664 ~~V~sl~fspdg~~L~sgs~DG~I~IWDl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~ 742 (1915)
..|..+.|+|...+|+++|.|.+|++|.-. ...|... ....+|...|.+++|++.|..|++++.
T Consensus 151 qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~--------------~tl~g~~~TVW~~~F~~~G~rl~s~sd- 215 (312)
T KOG0645|consen 151 QDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECV--------------QTLDGHENTVWSLAFDNIGSRLVSCSD- 215 (312)
T ss_pred ccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEE--------------EEecCccceEEEEEecCCCceEEEecC-
Confidence 999999999999999999999999999866 4544432 234457779999999999999999998
Q ss_pred CCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEE
Q psy9598 743 NFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW 822 (1915)
Q Consensus 743 Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vaf 822 (1915)
|++|+||-..+. .-..|...++.+.|. ...|+||+.|+.|+||....+-......+.....+.|...|++++|
T Consensus 216 D~tv~Iw~~~~~----~~~~~sr~~Y~v~W~---~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w 288 (312)
T KOG0645|consen 216 DGTVSIWRLYTD----LSGMHSRALYDVPWD---NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQW 288 (312)
T ss_pred CcceEeeeeccC----cchhcccceEeeeec---ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEE
Confidence 999999986521 112477889999997 3679999999999999876532211111111234456678999999
Q ss_pred cCC-CCEEEEEeCCCeEEEEeCC
Q psy9598 823 SPD-GTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 823 Spd-g~~Lasg~~dG~I~Iwdl~ 844 (1915)
.|. .++|++|+.||.|.+|.+.
T Consensus 289 ~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 289 NPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred cCCCCCceeecCCCceEEEEEec
Confidence 995 7899999999999999874
No 39
>KOG0263|consensus
Probab=99.97 E-value=5.4e-30 Score=313.65 Aligned_cols=252 Identities=27% Similarity=0.442 Sum_probs=221.7
Q ss_pred EEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC-------------------------------CceEEEeecC
Q psy9598 511 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT-------------------------------LAPISVLVGH 559 (1915)
Q Consensus 511 ~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t-------------------------------g~~~~~l~~h 559 (1915)
..++......++|..|++|+.+||.|..|..|++|.+.. +....++.||
T Consensus 371 ~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH 450 (707)
T KOG0263|consen 371 MYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGH 450 (707)
T ss_pred EEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecC
Confidence 344444456799999999999999999999999998862 1223557899
Q ss_pred CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC
Q psy9598 560 QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 639 (1915)
Q Consensus 560 ~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D 639 (1915)
.++|.++.|+|+ .++|++||.|++|++|.+.+..++.. ..+|..+|+++.|+|-|-++|+|+.|
T Consensus 451 ~GPVyg~sFsPd----~rfLlScSED~svRLWsl~t~s~~V~------------y~GH~~PVwdV~F~P~GyYFatas~D 514 (707)
T KOG0263|consen 451 SGPVYGCSFSPD----RRFLLSCSEDSSVRLWSLDTWSCLVI------------YKGHLAPVWDVQFAPRGYYFATASHD 514 (707)
T ss_pred CCceeeeeeccc----ccceeeccCCcceeeeecccceeEEE------------ecCCCcceeeEEecCCceEEEecCCC
Confidence 999999999995 49999999999999999988754322 23678999999999999999999999
Q ss_pred CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccc
Q psy9598 640 HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN 719 (1915)
Q Consensus 640 g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1915)
++.++|..+. ...+..+.+|-+.|.|+.|+|+..++++||.|.+|++||+.++..+.++ .+
T Consensus 515 ~tArLWs~d~---~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF----------------~G 575 (707)
T KOG0263|consen 515 QTARLWSTDH---NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF----------------TG 575 (707)
T ss_pred ceeeeeeccc---CCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe----------------cC
Confidence 9999999843 4455667899999999999999999999999999999999999866543 46
Q ss_pred ccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 720 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 720 ~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
|...|.+++|||+|++|++|+. ||.|.+||+.++.++..+.+|++.|++|.|+. +|.+||+||.|.+|++||+.....
T Consensus 576 H~~~V~al~~Sp~Gr~LaSg~e-d~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~-dg~vLasgg~DnsV~lWD~~~~~~ 653 (707)
T KOG0263|consen 576 HKGPVTALAFSPCGRYLASGDE-DGLIKIWDLANGSLVKQLKGHTGTIYSLSFSR-DGNVLASGGADNSVRLWDLTKVIE 653 (707)
T ss_pred CCCceEEEEEcCCCceEeeccc-CCcEEEEEcCCCcchhhhhcccCceeEEEEec-CCCEEEecCCCCeEEEEEchhhcc
Confidence 8999999999999999999999 99999999999999999999999999999999 999999999999999999976444
No 40
>KOG0266|consensus
Probab=99.97 E-value=1.9e-29 Score=320.93 Aligned_cols=295 Identities=27% Similarity=0.435 Sum_probs=253.1
Q ss_pred eEEecCC-CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy9598 469 HYVNLGH-LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK--LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIW 545 (1915)
Q Consensus 469 ~~~l~gH-~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~--~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVW 545 (1915)
...+.+| ..+|+|+.|+++|++|++++.|+.|++|++.++. ++..+.+|...|.+++|+|++.+|++|+.|++|+||
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIW 230 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEe
Confidence 4455555 8999999999999999999999999999998888 888889999999999999999999999999999999
Q ss_pred EC-CCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEE
Q psy9598 546 NL-QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS 624 (1915)
Q Consensus 546 Dl-~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l 624 (1915)
|+ ..+..+.++.+|...|++++|+|.+ +++++|+.|++|+|||+.++.+...+ .+|...|+++
T Consensus 231 d~~~~~~~~~~l~gH~~~v~~~~f~p~g----~~i~Sgs~D~tvriWd~~~~~~~~~l------------~~hs~~is~~ 294 (456)
T KOG0266|consen 231 DLKDDGRNLKTLKGHSTYVTSVAFSPDG----NLLVSGSDDGTVRIWDVRTGECVRKL------------KGHSDGISGL 294 (456)
T ss_pred eccCCCeEEEEecCCCCceEEEEecCCC----CEEEEecCCCcEEEEeccCCeEEEee------------eccCCceEEE
Confidence 99 6678999999999999999999953 99999999999999999987654433 3567899999
Q ss_pred EECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCC--eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK--VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 625 ~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~--V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
+|+++|.+|++++.||.|+|||+.+.... ++..+.++... +++++|+|++.+|++++.|+.+++||+..+.+.....
T Consensus 295 ~f~~d~~~l~s~s~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~ 373 (456)
T KOG0266|consen 295 AFSPDGNLLVSASYDGTIRVWDLETGSKL-CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYT 373 (456)
T ss_pred EECCCCCEEEEcCCCccEEEEECCCCcee-eeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeec
Confidence 99999999999999999999999543311 34555666555 9999999999999999999999999999877543221
Q ss_pred cccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCC-CCCeEEEEEccCCCCEEE
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH-TNEVFVLESHPFDSRVLL 781 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH-~~~V~sl~~sp~dg~~La 781 (1915)
... .....+.+...++.+.++++++. |+.|++||+.++..+..+.+| ...|..+.++| ...+++
T Consensus 374 ~~~-------------~~~~~~~~~~~~~~~~~i~sg~~-d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~-~~~~~~ 438 (456)
T KOG0266|consen 374 GHS-------------NLVRCIFSPTLSTGGKLIYSGSE-DGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHP-TENLIA 438 (456)
T ss_pred ccC-------------CcceeEecccccCCCCeEEEEeC-CceEEEEeCCccchhhhhcCCCCCceeccccCC-CcCeee
Confidence 100 00134555666889999999998 999999999999999999999 88999999999 889999
Q ss_pred EEe--cCceEEEEECC
Q psy9598 782 SAG--HDGLIIIWDIL 795 (1915)
Q Consensus 782 Sgs--~DG~I~IWdl~ 795 (1915)
+++ .|+.|++|...
T Consensus 439 s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 439 SSSFEGDGLIRLWKYD 454 (456)
T ss_pred ecCcCCCceEEEecCC
Confidence 998 79999999753
No 41
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=2.8e-28 Score=332.88 Aligned_cols=291 Identities=20% Similarity=0.292 Sum_probs=236.4
Q ss_pred ecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC----c----EEEEEeCCCCCEEEEEEeC-CCCEEEEEeCCCcE
Q psy9598 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG----K----LLATLRGCSGEISDIAIDN-RNILLAAGTVDKTI 542 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg----~----~~~~l~gH~~~I~~Lafsp-dg~~LaSgs~DgtI 542 (1915)
+.+|.+.|++++|+|+|.+||||+.||.|+||++.+. . ....+. +...|.+++|++ ++.+||+|+.||+|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVV 557 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeE
Confidence 4569999999999999999999999999999997542 1 233344 346899999987 47899999999999
Q ss_pred EEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceE
Q psy9598 543 RIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 543 rVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 622 (1915)
+|||+.++..+..+.+|.+.|++++|+|. ++.+|++|+.||+|++||+.++..+..+. +...|.
T Consensus 558 ~lWd~~~~~~~~~~~~H~~~V~~l~~~p~---~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~-------------~~~~v~ 621 (793)
T PLN00181 558 QVWDVARSQLVTEMKEHEKRVWSIDYSSA---DPTLLASGSDDGSVKLWSINQGVSIGTIK-------------TKANIC 621 (793)
T ss_pred EEEECCCCeEEEEecCCCCCEEEEEEcCC---CCCEEEEEcCCCEEEEEECCCCcEEEEEe-------------cCCCeE
Confidence 99999999999999999999999999973 45899999999999999998775433322 125689
Q ss_pred EEEEC-CCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEee
Q psy9598 623 CSSFS-PGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 701 (1915)
Q Consensus 623 ~l~fs-pdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~ 701 (1915)
|+.|+ ++|.+|++|+.||.|++||+.... ..+..+.+|...|.++.|. ++.+|++++.||+|+|||+......
T Consensus 622 ~v~~~~~~g~~latgs~dg~I~iwD~~~~~--~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~--- 695 (793)
T PLN00181 622 CVQFPSESGRSLAFGSADHKVYYYDLRNPK--LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISG--- 695 (793)
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCC--ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccc---
Confidence 99995 579999999999999999995432 2345677999999999997 7789999999999999998753200
Q ss_pred ecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEe-------------eCCCCCeE
Q psy9598 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL-------------KGHTNEVF 768 (1915)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l-------------~gH~~~V~ 768 (1915)
..........+|...+.+++|++++.+|++|+. |+.|++|+......+..+ ..|...|.
T Consensus 696 -------~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~-D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~ 767 (793)
T PLN00181 696 -------INETPLHSFMGHTNVKNFVGLSVSDGYIATGSE-TNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFIS 767 (793)
T ss_pred -------cCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC-CCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEE
Confidence 000111234457788899999999999999998 999999998765544322 23456799
Q ss_pred EEEEccCCCCEEEEEecCceEEEEEC
Q psy9598 769 VLESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 769 sl~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
+++|+| ++.+|++|+.||.|+||++
T Consensus 768 ~v~ws~-~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 768 SVCWRG-QSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEEEcC-CCCeEEEecCCCcEEEEec
Confidence 999999 9999999999999999996
No 42
>KOG0281|consensus
Probab=99.97 E-value=2.2e-30 Score=286.37 Aligned_cols=283 Identities=20% Similarity=0.338 Sum_probs=235.5
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI 597 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~ 597 (1915)
...|.|+.+. ...+++|..|++|+|||..+..++..+.||++.|.|+.|.. ..|++||.|.+|++||+.++.
T Consensus 197 skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~------rviisGSSDsTvrvWDv~tge 268 (499)
T KOG0281|consen 197 SKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE------RVIVSGSSDSTVRVWDVNTGE 268 (499)
T ss_pred CCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc------eEEEecCCCceEEEEeccCCc
Confidence 4579999875 44799999999999999999999999999999999999976 799999999999999999998
Q ss_pred cccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCE
Q psy9598 598 DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 677 (1915)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~ 677 (1915)
.+..+.. |...|..+.|+.+ ++++++.|.+|.|||+...........+.||...|+.+.|+ .++
T Consensus 269 ~l~tlih------------HceaVLhlrf~ng--~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~ky 332 (499)
T KOG0281|consen 269 PLNTLIH------------HCEAVLHLRFSNG--YMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKY 332 (499)
T ss_pred hhhHHhh------------hcceeEEEEEeCC--EEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cce
Confidence 7655543 4577888888754 89999999999999996555444555678999999999996 449
Q ss_pred EEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceE
Q psy9598 678 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLV 757 (1915)
Q Consensus 678 L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i 757 (1915)
++++|.|.+|++|++.+..++.+ ..+|...|.|+.+ .|+++++|++ |.+|++||+..|.++
T Consensus 333 IVsASgDRTikvW~~st~efvRt----------------l~gHkRGIAClQY--r~rlvVSGSS-DntIRlwdi~~G~cL 393 (499)
T KOG0281|consen 333 IVSASGDRTIKVWSTSTCEFVRT----------------LNGHKRGIACLQY--RDRLVVSGSS-DNTIRLWDIECGACL 393 (499)
T ss_pred EEEecCCceEEEEeccceeeehh----------------hhcccccceehhc--cCeEEEecCC-CceEEEEeccccHHH
Confidence 99999999999999998886542 3457777877765 5888888888 999999999999999
Q ss_pred EEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcccc--ceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCC
Q psy9598 758 QVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRG--YKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 835 (1915)
Q Consensus 758 ~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~--~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~d 835 (1915)
..+.||..-|.++.|. ...+++|+.||+|+|||+.++.... ..++.......|.|.|+.+.| |...|++++.|
T Consensus 394 RvLeGHEeLvRciRFd---~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHd 468 (499)
T KOG0281|consen 394 RVLEGHEELVRCIRFD---NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHD 468 (499)
T ss_pred HHHhchHHhhhheeec---CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCC
Confidence 9999999999999995 4889999999999999998765410 011111112356689999998 55789999999
Q ss_pred CeEEEEeCCCCcc
Q psy9598 836 GHLLVYGLGGFKR 848 (1915)
Q Consensus 836 G~I~Iwdl~s~~~ 848 (1915)
.+|.|||+..+-.
T Consensus 469 dtILiWdFl~~~~ 481 (499)
T KOG0281|consen 469 DTILIWDFLNGPP 481 (499)
T ss_pred CeEEEEEcCCCCc
Confidence 9999999987643
No 43
>KOG0316|consensus
Probab=99.97 E-value=9.1e-29 Score=262.21 Aligned_cols=282 Identities=22% Similarity=0.298 Sum_probs=235.9
Q ss_pred eEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Q psy9598 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~ 548 (1915)
.+.|.+|.++|.++.|+-+|+|.+|++.|.+|++|+...|.+++++.||...|.+++.+.|+..|++|+.|..|.+||+.
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~ 89 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN 89 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence 34778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECC
Q psy9598 549 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP 628 (1915)
Q Consensus 549 tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp 628 (1915)
+|+.+..+.+|.+.|+.+.|+... ..+++|+.|.+|++||.++..
T Consensus 90 TGkv~Rr~rgH~aqVNtV~fNees----SVv~SgsfD~s~r~wDCRS~s------------------------------- 134 (307)
T KOG0316|consen 90 TGKVDRRFRGHLAQVNTVRFNEES----SVVASGSFDSSVRLWDCRSRS------------------------------- 134 (307)
T ss_pred cCeeeeecccccceeeEEEecCcc----eEEEeccccceeEEEEcccCC-------------------------------
Confidence 999999999999999999998743 788888888888888876542
Q ss_pred CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccC
Q psy9598 629 GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708 (1915)
Q Consensus 629 dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~ 708 (1915)
...+..+......|.+|..+ +..+++||.||+++.||++.++...
T Consensus 135 ------------------------~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~s--------- 179 (307)
T KOG0316|consen 135 ------------------------FEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSS--------- 179 (307)
T ss_pred ------------------------CCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeeh---------
Confidence 11222233344566676664 5589999999999999999887322
Q ss_pred CCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEE--EEccCCCCEEEEEecC
Q psy9598 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVL--ESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 709 ~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl--~~sp~dg~~LaSgs~D 786 (1915)
.-...+|++++|+++++.+++++- |++|++.|-.+|+++..+.||.+.-+.+ +++. ....+++|+.|
T Consensus 180 ---------Dy~g~pit~vs~s~d~nc~La~~l-~stlrLlDk~tGklL~sYkGhkn~eykldc~l~q-sdthV~sgSED 248 (307)
T KOG0316|consen 180 ---------DYFGHPITSVSFSKDGNCSLASSL-DSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQ-SDTHVFSGSED 248 (307)
T ss_pred ---------hhcCCcceeEEecCCCCEEEEeec-cceeeecccchhHHHHHhcccccceeeeeeeecc-cceeEEeccCC
Confidence 124568999999999999999998 9999999999999999999998755444 4555 66789999999
Q ss_pred ceEEEEECCCCccccceeeeeeecCCCCcc-eEEEEEcCCCCEEEEEeCCCeE
Q psy9598 787 GLIIIWDILSSKQRGYKWFHNIVEGQGEGA-LFDGKWSPDGTTCALTDSYGHL 838 (1915)
Q Consensus 787 G~I~IWdl~s~~~~~~~~~~~~~~~~~~~~-V~~vafSpdg~~Lasg~~dG~I 838 (1915)
|.|++||+..... +..+. .+... |.+++++|.-..|++++..+.+
T Consensus 249 G~Vy~wdLvd~~~--~sk~~-----~~~~v~v~dl~~hp~~~~f~~A~~~~~~ 294 (307)
T KOG0316|consen 249 GKVYFWDLVDETQ--ISKLS-----VVSTVIVTDLSCHPTMDDFITATGHGDL 294 (307)
T ss_pred ceEEEEEecccee--eeeec-----cCCceeEEeeecccCccceeEecCCcee
Confidence 9999999988877 55544 33334 7899999988777777765443
No 44
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=4.4e-28 Score=287.49 Aligned_cols=288 Identities=27% Similarity=0.444 Sum_probs=248.2
Q ss_pred EEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEE
Q psy9598 511 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590 (1915)
Q Consensus 511 ~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~i 590 (1915)
+.++.+|.+.|++++|++++.+|++|+.||.|++|++.++.....+.+|...+.++.|+|. +.+|++++.+|.|.+
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASAD----GTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCC----CCEEEEEcCCCeEEE
Confidence 3567799999999999999999999999999999999999888899999999999999994 379999999999999
Q ss_pred EecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEE
Q psy9598 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQ 670 (1915)
Q Consensus 591 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~ 670 (1915)
|++..+.....+ ..|...+.++.|++++.++++++.+|.|.+|++. ....+..+..|...|.+++
T Consensus 78 ~~~~~~~~~~~~------------~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~i~~~~ 142 (289)
T cd00200 78 WDLETGECVRTL------------TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE---TGKCLTTLRGHTDWVNSVA 142 (289)
T ss_pred EEcCcccceEEE------------eccCCcEEEEEEcCCCCEEEEecCCCeEEEEECC---CcEEEEEeccCCCcEEEEE
Confidence 999876432222 2445689999999998888888889999999994 3345566778999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEE
Q psy9598 671 WSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 750 (1915)
Q Consensus 671 fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD 750 (1915)
|++++.++++++.||.|++||+.+++.... ...+...+.+++|++++..+++++. ++.|++||
T Consensus 143 ~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~----------------~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~i~d 205 (289)
T cd00200 143 FSPDGTFVASSSQDGTIKLWDLRTGKCVAT----------------LTGHTGEVNSVAFSPDGEKLLSSSS-DGTIKLWD 205 (289)
T ss_pred EcCcCCEEEEEcCCCcEEEEEcccccccee----------------EecCccccceEEECCCcCEEEEecC-CCcEEEEE
Confidence 999998998888899999999986653321 1135568999999999999999998 99999999
Q ss_pred CCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEE
Q psy9598 751 AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830 (1915)
Q Consensus 751 ~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~La 830 (1915)
+.++..+..+.+|...|.+++|+| ++.++++++.||.|++|++.++.. ...+. .+...|.+++|++++.+|+
T Consensus 206 ~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~i~~~~~~~~--~~~~~-----~~~~~i~~~~~~~~~~~l~ 277 (289)
T cd00200 206 LSTGKCLGTLRGHENGVNSVAFSP-DGYLLASGSEDGTIRVWDLRTGEC--VQTLS-----GHTNSVTSLAWSPDGKRLA 277 (289)
T ss_pred CCCCceecchhhcCCceEEEEEcC-CCcEEEEEcCCCcEEEEEcCCcee--EEEcc-----ccCCcEEEEEECCCCCEEE
Confidence 999999999989999999999999 788888888899999999988766 44443 4557899999999999999
Q ss_pred EEeCCCeEEEEe
Q psy9598 831 LTDSYGHLLVYG 842 (1915)
Q Consensus 831 sg~~dG~I~Iwd 842 (1915)
+++.||.|.+|+
T Consensus 278 ~~~~d~~i~iw~ 289 (289)
T cd00200 278 SGSADGTIRIWD 289 (289)
T ss_pred EecCCCeEEecC
Confidence 999999999996
No 45
>KOG0276|consensus
Probab=99.97 E-value=5.6e-28 Score=285.18 Aligned_cols=378 Identities=21% Similarity=0.279 Sum_probs=274.4
Q ss_pred cccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeC
Q psy9598 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN 528 (1915)
Q Consensus 449 tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafsp 528 (1915)
++-+.+.+.+|. |.+..+++.+.-..-+|.++.|-+-.++|++|++|+.|+||+..|++.+++|..|..-|.||+.+|
T Consensus 30 a~LynG~V~IWn--yetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHP 107 (794)
T KOG0276|consen 30 AALYNGDVQIWN--YETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHP 107 (794)
T ss_pred EeeecCeeEEEe--cccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecC
Confidence 344567788885 555666778888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCC-CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCc
Q psy9598 529 RNILLAAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEP 607 (1915)
Q Consensus 529 dg~~LaSgs~DgtIrVWDl~t-g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~ 607 (1915)
...+++|+|.|-+|++||.+. ..+..++.||+.-|.+|+|.|. +.+.++++|-|++|++|.+.+.....+
T Consensus 108 t~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPk---D~ntFaS~sLDrTVKVWslgs~~~nfT------ 178 (794)
T KOG0276|consen 108 TLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPK---DPNTFASASLDRTVKVWSLGSPHPNFT------ 178 (794)
T ss_pred CCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCC---CccceeeeeccccEEEEEcCCCCCcee------
Confidence 999999999999999999975 5788999999999999999994 679999999999999999877643222
Q ss_pred cccccccCCCCCceEEEEECCCC--cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC
Q psy9598 608 VMFNERIRPGNAHILCSSFSPGG--LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685 (1915)
Q Consensus 608 ~~~~~~~~~~~~~V~~l~fspdg--~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG 685 (1915)
+.+|...|+|+.|-+.| .+|++|+.|.+|+|||. .+..|+.++.||...|..++|+|.-..++|||.||
T Consensus 179 ------l~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDy---Qtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDG 249 (794)
T KOG0276|consen 179 ------LEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDY---QTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDG 249 (794)
T ss_pred ------eeccccCcceEEeccCCCcceEEecCCCceEEEeec---chHHHHHHhhcccccceEEEecCCCcEEEEecCCc
Confidence 33678899999999866 58999999999999999 56678999999999999999999999999999999
Q ss_pred cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee----
Q psy9598 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK---- 761 (1915)
Q Consensus 686 ~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~---- 761 (1915)
+|+||...+-.... ...-....|+||+-.+.+..+++|.. .|.|.| .+....+...+.
T Consensus 250 TvriWhs~Ty~lE~----------------tLn~gleRvW~I~~~k~~~~i~vG~D-eg~i~v-~lgreeP~vsMd~~gK 311 (794)
T KOG0276|consen 250 TVRIWNSKTYKLEK----------------TLNYGLERVWCIAAHKGDGKIAVGFD-EGSVTV-KLGREEPAVSMDSNGK 311 (794)
T ss_pred cEEEecCcceehhh----------------hhhcCCceEEEEeecCCCCeEEEecc-CCcEEE-EccCCCCceeecCCcc
Confidence 99999876654211 11123456778887777777776665 444332 222111111110
Q ss_pred ----CCC------------------C---------------CeEEEEEccCCCCEEEEEecCceEEEEECCCCcccccee
Q psy9598 762 ----GHT------------------N---------------EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW 804 (1915)
Q Consensus 762 ----gH~------------------~---------------~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~ 804 (1915)
.|. + .-..++.+| +|+++++|| ||.-.||..-.-+
T Consensus 312 Iiwa~~~ei~~~~~ks~~~~~ev~DgErL~LsvKeLgs~eiyPq~L~hsP-NGrfV~Vcg-dGEyiIyTala~R------ 383 (794)
T KOG0276|consen 312 IIWAVHSEIQAVNLKSVGAQKEVTDGERLPLSVKELGSVEIYPQTLAHSP-NGRFVVVCG-DGEYIIYTALALR------ 383 (794)
T ss_pred EEEEcCceeeeeeceeccCcccccCCccccchhhhccccccchHHhccCC-CCcEEEEec-CccEEEEEeeehh------
Confidence 000 0 012345667 777666555 7887787642211
Q ss_pred eeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCCC--ceeecCCCCeeeecCCCccceeeccc
Q psy9598 805 FHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR--ELFFHTDYRTLNRPNGLFEPTYDEVT 880 (1915)
Q Consensus 805 ~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~--~~~F~~d~~~Lv~~~~~~~~v~D~~t 880 (1915)
....|.-....|++|.+.+|+-.++|.|.++ ..++..+.+.. ..-+--.|..|...+.+++..||..+
T Consensus 384 ------nK~fG~~~eFvw~~dsne~avRes~~~vki~--knfke~ksi~~~~~~e~i~gg~Llg~~ss~~~~fydW~~ 453 (794)
T KOG0276|consen 384 ------NKAFGSGLEFVWAADSNEFAVRESNGNVKIF--KNFKEHKSIRPDMSAEGIFGGPLLGVRSSDFLCFYDWES 453 (794)
T ss_pred ------hcccccceeEEEcCCCCeEEEEecCCceEEE--ecceeccccccccceeeecCCceEEEEeCCeEEEEEccc
Confidence 1223445566677776667777666667666 44444443332 11122223333344444444555433
No 46
>KOG0282|consensus
Probab=99.97 E-value=5e-30 Score=297.16 Aligned_cols=290 Identities=19% Similarity=0.312 Sum_probs=248.6
Q ss_pred cEEEEEeCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCC-CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC
Q psy9598 509 KLLATLRGCSGEISDIAIDN-RNILLAAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586 (1915)
Q Consensus 509 ~~~~~l~gH~~~I~~Lafsp-dg~~LaSgs~DgtIrVWDl~t-g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg 586 (1915)
+.++++.||+..|++|.|.| .+.+|++|+.|+.|+||++.. +.++.++.||..+|.+++|++. +..|+++|.|+
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~----g~~fLS~sfD~ 280 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNC----GTSFLSASFDR 280 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhcccc----CCeeeeeecce
Confidence 56778899999999999999 899999999999999999976 8999999999999999999984 58999999999
Q ss_pred eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCC
Q psy9598 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 665 (1915)
Q Consensus 587 tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~ 665 (1915)
+|++||+.+|.++..+... ..++|+.|.|++ +.+++|+.|+.|+.||++. ...+..+..|-+.
T Consensus 281 ~lKlwDtETG~~~~~f~~~-------------~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs---~kvvqeYd~hLg~ 344 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFHLD-------------KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRS---GKVVQEYDRHLGA 344 (503)
T ss_pred eeeeeccccceEEEEEecC-------------CCceeeecCCCCCcEEEEecCCCcEEEEeccc---hHHHHHHHhhhhh
Confidence 9999999999887766554 668999999998 8899999999999999954 3456677889999
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe
Q psy9598 666 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745 (1915)
Q Consensus 666 V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~ 745 (1915)
|..|.|-++|.+|++++.|++++||+.+....+... .........+|..+|++.++++-+. |+.
T Consensus 345 i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i---------------~~~~~hsmP~~~~~P~~~~~~aQs~-dN~ 408 (503)
T KOG0282|consen 345 ILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNI---------------ADPEMHTMPCLTLHPNGKWFAAQSM-DNY 408 (503)
T ss_pred eeeeEEccCCceEeeeccCccEEEEEcCCCccchhh---------------cchhhccCcceecCCCCCeehhhcc-Cce
Confidence 999999999999999999999999998876533211 1123344567899999999999888 999
Q ss_pred EEEEECCCC---ceEEEeeCCC--CCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEE
Q psy9598 746 IKIWDAFNG---DLVQVLKGHT--NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDG 820 (1915)
Q Consensus 746 I~vwD~~tg---~~i~~l~gH~--~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~v 820 (1915)
|.+|.+... ..-..+.||. +.-..|.||| ||.+|++|+.||.|.+||..+.+. +..+. .|.+++..+
T Consensus 409 i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp-DG~~l~SGdsdG~v~~wdwkt~kl--~~~lk-----ah~~~ci~v 480 (503)
T KOG0282|consen 409 IAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP-DGRTLCSGDSDGKVNFWDWKTTKL--VSKLK-----AHDQPCIGV 480 (503)
T ss_pred EEEEecccccccCHhhhhcceeccCceeeEEEcC-CCCeEEeecCCccEEEeechhhhh--hhccc-----cCCcceEEE
Confidence 999986532 3344677885 4567788999 999999999999999999999887 66665 567899999
Q ss_pred EEcCC-CCEEEEEeCCCeEEEEe
Q psy9598 821 KWSPD-GTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 821 afSpd-g~~Lasg~~dG~I~Iwd 842 (1915)
.|+|. ...+|+|+.+|.|++|+
T Consensus 481 ~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 481 DWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EecCCCcceeEecccCceeEecC
Confidence 99995 56899999999999996
No 47
>KOG0292|consensus
Probab=99.97 E-value=4.2e-28 Score=294.78 Aligned_cols=400 Identities=19% Similarity=0.231 Sum_probs=281.4
Q ss_pred CCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCE
Q psy9598 453 SRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532 (1915)
Q Consensus 453 d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~ 532 (1915)
.+.+.+|+. .--.++.+|.+|.++|..|+|+|++.++++||+|-.|+||+..+.+++.+|.||-.-|..+.|++.-.+
T Consensus 30 sG~IQlWDY--RM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPW 107 (1202)
T KOG0292|consen 30 SGVIQLWDY--RMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPW 107 (1202)
T ss_pred Cceeeeehh--hhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCce
Confidence 456777754 444556689999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcccccee---------
Q psy9598 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV--------- 603 (1915)
Q Consensus 533 LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~--------- 603 (1915)
|+|+|.|.+|+||++++.+++.++.||...|.|..|+|.. .+++++|-|.+|++||+..-..-....
T Consensus 108 IlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptE----DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~ 183 (1202)
T KOG0292|consen 108 ILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTE----DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRG 183 (1202)
T ss_pred EEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCcc----ceEEEecccceEEEEeecchhccCCCCCCchhhhhc
Confidence 9999999999999999999999999999999999999965 899999999999999986532211110
Q ss_pred -------c-cCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC
Q psy9598 604 -------F-HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675 (1915)
Q Consensus 604 -------~-~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg 675 (1915)
+ .........+.+|...|+.++|+|.-.+|++|+.|..|++|.+.. ...-.+-+..+|.+.|.++-|+|..
T Consensus 184 ~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne-tKaWEvDtcrgH~nnVssvlfhp~q 262 (1202)
T KOG0292|consen 184 QQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE-TKAWEVDTCRGHYNNVSSVLFHPHQ 262 (1202)
T ss_pred cccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc-ccceeehhhhcccCCcceEEecCcc
Confidence 0 011223345678999999999999999999999999999999943 3344566788999999999999999
Q ss_pred CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe--------------
Q psy9598 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN-------------- 741 (1915)
Q Consensus 676 ~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~-------------- 741 (1915)
.+++|.|.|++|+|||+.....+..+. ......+.++.+|..+++++|..
T Consensus 263 ~lIlSnsEDksirVwDm~kRt~v~tfr----------------rendRFW~laahP~lNLfAAgHDsGm~VFkleRErpa 326 (1202)
T KOG0292|consen 263 DLILSNSEDKSIRVWDMTKRTSVQTFR----------------RENDRFWILAAHPELNLFAAGHDSGMIVFKLERERPA 326 (1202)
T ss_pred ceeEecCCCccEEEEecccccceeeee----------------ccCCeEEEEEecCCcceeeeecCCceEEEEEcccCce
Confidence 999999999999999998766443321 12344556666666655554432
Q ss_pred -----------cCCeEEEEECCCCce--EEEeeCC---CCCeEEEEEccCCCCEEEEEecC-ceEEEEECCCCcccccee
Q psy9598 742 -----------FNFQIKIWDAFNGDL--VQVLKGH---TNEVFVLESHPFDSRVLLSAGHD-GLIIIWDILSSKQRGYKW 804 (1915)
Q Consensus 742 -----------~Dg~I~vwD~~tg~~--i~~l~gH---~~~V~sl~~sp~dg~~LaSgs~D-G~I~IWdl~s~~~~~~~~ 804 (1915)
.|..|+.+|+.+.+- +..++.. ..++.++.++|..+..|++...| |.--++.+...... ...
T Consensus 327 ~~v~~n~LfYvkd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk~~~~-~~~ 405 (1202)
T KOG0292|consen 327 YAVNGNGLFYVKDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPKDSDG-VSD 405 (1202)
T ss_pred EEEcCCEEEEEccceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecCcccc-cCC
Confidence 023344445444222 2223322 25788899999556566665544 44445555332110 000
Q ss_pred eeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc--ccc--CCCceeecCCCCeeeecCCCccceeeccc
Q psy9598 805 FHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKR--PQN--IPRELFFHTDYRTLNRPNGLFEPTYDEVT 880 (1915)
Q Consensus 805 ~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~--~~~--l~~~~~F~~d~~~Lv~~~~~~~~v~D~~t 880 (1915)
......+.+.+++ |-...++.+.--++..+.|-++.+... +.. ....+|+..+|..|++.... +.++|++.
T Consensus 406 ~~~~~k~tG~~a~----fvarNrfavl~k~~~~v~ik~l~N~vtkkl~~~~~~~~IF~ag~g~lll~~~~~-v~lfdvQq 480 (1202)
T KOG0292|consen 406 GKDVKKGTGEGAL----FVARNRFAVLDKSNEQVVIKNLKNKVTKKLLLPESTDDIFYAGTGNLLLRSPDS-VTLFDVQQ 480 (1202)
T ss_pred chhhhcCCCCceE----EEEecceEEEEecCcceEEecccchhhhcccCcccccceeeccCccEEEEcCCe-EEEEEeec
Confidence 0111122222222 222223333333356677777764321 111 22378999999888754322 24778775
Q ss_pred C
Q psy9598 881 N 881 (1915)
Q Consensus 881 ~ 881 (1915)
.
T Consensus 481 ~ 481 (1202)
T KOG0292|consen 481 K 481 (1202)
T ss_pred c
Confidence 5
No 48
>KOG1474|consensus
Probab=99.96 E-value=1.3e-30 Score=337.20 Aligned_cols=253 Identities=26% Similarity=0.441 Sum_probs=191.0
Q ss_pred hcCCCccCCCCCCCCCCCC--CccccccCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q psy9598 1385 VMGLSVAEPFLVPVDISQY--PAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462 (1915)
Q Consensus 1385 ~~~~~~~~~F~~pv~~~~~--p~Y~~~I~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na~~yN~~~s~i~~~a~~l 1462 (1915)
+..+.++++|..||+...+ |+||.+|++|||++||.+|+++++|.......+||..+|.||.+||.++-.|+.+++.+
T Consensus 4 ~~~~~~~~~f~~~v~~v~l~~~~~~~~~~~~~d~~~~~~~~e~n~~~~~~~~~~~f~~~~sn~~~~~~~~~~v~~~~~~~ 83 (640)
T KOG1474|consen 4 ARKHKLAWPFLEPVDAVALNLPAYYEIIKRPMDIGTIEKRVENNYYFSASECIADFKTKFSNCYLFNDSGDDVVRMKQSL 83 (640)
T ss_pred cccccccccccCccchhhccchhhhcccCCCCCchhhhhhhccCccccHhhhhhhccccccchhcccCCccchhhccccc
Confidence 3467789999999998744 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCccch--hhhh----------------cccc-----------cCCC------------Chhh----
Q psy9598 1463 TDLLLRIIKEPNPVDVPVV--YHEL----------------LQNY-----------ETSS------------SEEE---- 1497 (1915)
Q Consensus 1463 ~~~~~~~~~~~~~~~~~~~--~~~~----------------~~~~-----------~~~~------------~~~~---- 1497 (1915)
.+++.+.+..++-...... .... .... .... ....
T Consensus 84 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (640)
T KOG1474|consen 84 EKLFPKKLRSMPSDEEDKSSVGPKASKIPLDKDSSSQVRKLSERLKQELQQVRPLTKAVEFSPEPSVVSPVSPASQPFKS 163 (640)
T ss_pred hhhcccccccccccccCCcccccccccCcCCCCchhhhhhhhhccccccccCCcccccccccccccccCCCCCccccccc
Confidence 9999777765332211110 0000 0000 0000 0000
Q ss_pred -------hh--hhh-hhhccccCCcchhhhhH-H-------------HhhhhhcCCchhhHHHHHHHHHHHHcCCCCCCC
Q psy9598 1498 -------EE--EDS-KSRQRRVRPTAVTRAQR-E-------------AMNQKKLKRPFNWKNECREVLETLWVCPDSEPF 1553 (1915)
Q Consensus 1498 -------~~--~~~-~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~ll~~l~~~~~s~~F 1553 (1915)
.+ .++ .....+.......+... . ............+.++|..||..|+.|+++|||
T Consensus 164 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~C~~iLk~l~~~k~awpF 243 (640)
T KOG1474|consen 164 KNGVKKVADTCVKSYKSKSEREPSPGQKREGTVAPNSSRESGDSAAEEEAKPKSKLTVELLKQCLSILKRLMKHKHAWPF 243 (640)
T ss_pred ccchhhhhccccccccccCcCCCCccccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHhccCCCCc
Confidence 00 000 00000000000000000 0 011112344566889999999999999999999
Q ss_pred CCCCC--CCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy9598 1554 RKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLR 1631 (1915)
Q Consensus 1554 ~~pv~--~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~i~~~a~~l~~~f~~~~~ 1631 (1915)
+.||| ..++||||+|||+||||+||++||.++.|.++.+|..||+|||.||++||+++ +.||.||..|+.+|+.+|.
T Consensus 244 ~~PVD~v~LgLpDY~~IIK~PMDLgTIK~kL~~~~Y~~~~eF~~DVRL~F~Ncm~YNp~g-~dV~~Ma~~L~~~Fe~rw~ 322 (640)
T KOG1474|consen 244 NEPVDVVKLGLPDYHDIIKHPMDLGTIKKKLEKGEYKSAEEFAADVRLTFDNCMTYNPEG-SDVYAMAKKLQEVFEERWA 322 (640)
T ss_pred CCCcCHHhcCCcchhhhcCCCccHHHHHhhhcccccCCHHHHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHh
Confidence 99999 88999999999999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred HHHHHhh
Q psy9598 1632 RLTVRWN 1638 (1915)
Q Consensus 1632 ~~~~~~~ 1638 (1915)
.+...+.
T Consensus 323 ~~~~~~~ 329 (640)
T KOG1474|consen 323 SMPLEIE 329 (640)
T ss_pred hcccccc
Confidence 9887665
No 49
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.8e-27 Score=325.10 Aligned_cols=307 Identities=15% Similarity=0.253 Sum_probs=244.4
Q ss_pred CCcEEEEECCCCcEEEEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC----c----eEEEeecCCCCe
Q psy9598 497 DLLIKLWRARDGKLLATL-----RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL----A----PISVLVGHQGII 563 (1915)
Q Consensus 497 Dg~I~IWd~~tg~~~~~l-----~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg----~----~~~~l~~h~~~V 563 (1915)
+|.+++|+..+......+ .+|.+.|++++|+++|.+||+|+.|++|+||++.+. . ++..+. +...|
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v 535 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL 535 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence 788999998876655443 458999999999999999999999999999998542 1 223333 34679
Q ss_pred EEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECC-CCcEEEEEeCCCeE
Q psy9598 564 TGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP-GGLFLATGSGDHHV 642 (1915)
Q Consensus 564 ~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I 642 (1915)
.+++|++. .+.+|++++.||+|++||+.++..+. .+..|...|++++|+| ++.+|++|+.||.|
T Consensus 536 ~~l~~~~~---~~~~las~~~Dg~v~lWd~~~~~~~~------------~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v 600 (793)
T PLN00181 536 SGICWNSY---IKSQVASSNFEGVVQVWDVARSQLVT------------EMKEHEKRVWSIDYSSADPTLLASGSDDGSV 600 (793)
T ss_pred eeEEeccC---CCCEEEEEeCCCeEEEEECCCCeEEE------------EecCCCCCEEEEEEcCCCCCEEEEEcCCCEE
Confidence 99999884 35789999999999999998764322 2235678899999997 78899999999999
Q ss_pred EEEEecCCCCCceeEEeccCCCCeeEEEEc-CCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccccc
Q psy9598 643 RVYKMDGVDSPLGILEVEEHSDKVDSIQWS-HSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721 (1915)
Q Consensus 643 ~IwDl~~~~~~~~i~~l~~h~~~V~sl~fs-pdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1915)
++||+.. ...+..+..+ ..|.++.|+ ++|.+|++|+.||.|++||++..... .....+|.
T Consensus 601 ~iWd~~~---~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~---------------~~~~~~h~ 661 (793)
T PLN00181 601 KLWSINQ---GVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLP---------------LCTMIGHS 661 (793)
T ss_pred EEEECCC---CcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCcc---------------ceEecCCC
Confidence 9999943 3445555544 679999995 57999999999999999999765411 01123577
Q ss_pred ccEEEEEECCCCCEEEEEEecCCeEEEEECCC------CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFN------GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 722 ~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t------g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
..|.++.|. ++.+|++++. |++|+|||+.. +.++..+.+|...+.+++|+| ++.+|++|+.||.|+||+..
T Consensus 662 ~~V~~v~f~-~~~~lvs~s~-D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~-~~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 662 KTVSYVRFV-DSSTLVSSST-DNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSV-SDGYIATGSETNEVFVYHKA 738 (793)
T ss_pred CCEEEEEEe-CCCEEEEEEC-CCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcC-CCCEEEEEeCCCEEEEEECC
Confidence 889999997 7888999888 99999999974 367889999999999999999 88999999999999999987
Q ss_pred CCccccceeeee--------eecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 796 SSKQRGYKWFHN--------IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 796 s~~~~~~~~~~~--------~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
.... +..+.. .....+...|.+++|+|++..|++|+.+|.|+||++
T Consensus 739 ~~~~--~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 739 FPMP--VLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCCc--eEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 6654 222210 001123457999999999999999999999999986
No 50
>KOG0275|consensus
Probab=99.96 E-value=5.3e-29 Score=272.66 Aligned_cols=286 Identities=21% Similarity=0.307 Sum_probs=244.1
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE--------eCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Q psy9598 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL--------RGCSGEISDIAIDNRNILLAAGTVDKTIRI 544 (1915)
Q Consensus 473 ~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l--------~gH~~~I~~Lafspdg~~LaSgs~DgtIrV 544 (1915)
.|..+-+-|..|||||+||++|+.||-|-|||..+|++...+ --|...|.||+|+.|..+||+|+.||.|+|
T Consensus 210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKV 289 (508)
T ss_pred cccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEE
Confidence 477788999999999999999999999999999999876544 357889999999999999999999999999
Q ss_pred EECCCCceEEEee-cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEE
Q psy9598 545 WNLQTLAPISVLV-GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 623 (1915)
Q Consensus 545 WDl~tg~~~~~l~-~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 623 (1915)
|.+.+|.|+..|. .|+..|+|+.|+. ++..+++++.|.++++.-+.+|+++.. +++|.+.|+.
T Consensus 290 Wri~tG~ClRrFdrAHtkGvt~l~FSr----D~SqiLS~sfD~tvRiHGlKSGK~LKE------------frGHsSyvn~ 353 (508)
T KOG0275|consen 290 WRIETGQCLRRFDRAHTKGVTCLSFSR----DNSQILSASFDQTVRIHGLKSGKCLKE------------FRGHSSYVNE 353 (508)
T ss_pred EEEecchHHHHhhhhhccCeeEEEEcc----CcchhhcccccceEEEeccccchhHHH------------hcCccccccc
Confidence 9999999999987 8999999999998 458999999999999999998875443 4567899999
Q ss_pred EEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEe--ccCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEccCCceEEe
Q psy9598 624 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV--EEHSDKVDSIQWSHS-HLRFVSGSRDGTALIWYYKCSQWRFI 700 (1915)
Q Consensus 624 l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l--~~h~~~V~sl~fspd-g~~L~sgs~DG~I~IWDl~~~~~~~~ 700 (1915)
+.|+++|..+++++.||+|+||+..+ ..++.++ .+...+|.++..-|. ...|++|...++|.|-++...-...
T Consensus 354 a~ft~dG~~iisaSsDgtvkvW~~Kt---teC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrs- 429 (508)
T KOG0275|consen 354 ATFTDDGHHIISASSDGTVKVWHGKT---TECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRS- 429 (508)
T ss_pred eEEcCCCCeEEEecCCccEEEecCcc---hhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEee-
Confidence 99999999999999999999999843 3344433 345567888887765 4589999999999999887443211
Q ss_pred eecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEE
Q psy9598 701 RLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 780 (1915)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~L 780 (1915)
. .......+...+++++|.|.++++.+. |+.++.|.+.+|.+-+++..|...|..++-|| ..++|
T Consensus 430 f-------------sSGkREgGdFi~~~lSpkGewiYcigE-D~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHP-HqNll 494 (508)
T KOG0275|consen 430 F-------------SSGKREGGDFINAILSPKGEWIYCIGE-DGVLYCFSVLSGKLERTLPVHEKDVIGLTHHP-HQNLL 494 (508)
T ss_pred e-------------ccCCccCCceEEEEecCCCcEEEEEcc-CcEEEEEEeecCceeeeeecccccccccccCc-ccchh
Confidence 1 111223456778889999999999998 99999999999999999999999999999999 88999
Q ss_pred EEEecCceEEEEE
Q psy9598 781 LSAGHDGLIIIWD 793 (1915)
Q Consensus 781 aSgs~DG~I~IWd 793 (1915)
++-+.||.+++|.
T Consensus 495 AsYsEDgllKLWk 507 (508)
T KOG0275|consen 495 ASYSEDGLLKLWK 507 (508)
T ss_pred hhhcccchhhhcC
Confidence 9999999999994
No 51
>KOG0293|consensus
Probab=99.96 E-value=1.2e-28 Score=278.94 Aligned_cols=293 Identities=17% Similarity=0.241 Sum_probs=245.5
Q ss_pred EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC---CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC
Q psy9598 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT---LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t---g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg 586 (1915)
..+++..|+..|.-+.||++|++||||+.|.+..||.+.. .+..+++.+|..+|..|.|+|+. ++|++|+.+.
T Consensus 216 t~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDd----ryLlaCg~~e 291 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDD----RYLLACGFDE 291 (519)
T ss_pred hhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCC----CeEEecCchH
Confidence 3456788999999999999999999999999999998854 34578899999999999999954 9999999999
Q ss_pred eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccC-CCC
Q psy9598 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH-SDK 665 (1915)
Q Consensus 587 tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h-~~~ 665 (1915)
.+.+||+.++........ ++...+.|++|.|||..+++|+.|+.|..||+++.. +....+- ...
T Consensus 292 ~~~lwDv~tgd~~~~y~~-----------~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~----~~~W~gvr~~~ 356 (519)
T KOG0293|consen 292 VLSLWDVDTGDLRHLYPS-----------GLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI----LGNWEGVRDPK 356 (519)
T ss_pred heeeccCCcchhhhhccc-----------CcCCCcceeEEccCCceeEecCCCCcEEEecCCcch----hhcccccccce
Confidence 999999999865333221 124678999999999999999999999999996532 2222222 256
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe
Q psy9598 666 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745 (1915)
Q Consensus 666 V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~ 745 (1915)
|.++++++||.++++.+.|..|++++..+...+. ......+|+++++|.+|+++++.-. +..
T Consensus 357 v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~-----------------lise~~~its~~iS~d~k~~LvnL~-~qe 418 (519)
T KOG0293|consen 357 VHDLAITYDGKYVLLVTVDKKIRLYNREARVDRG-----------------LISEEQPITSFSISKDGKLALVNLQ-DQE 418 (519)
T ss_pred eEEEEEcCCCcEEEEEecccceeeechhhhhhhc-----------------cccccCceeEEEEcCCCcEEEEEcc-cCe
Confidence 9999999999999999999999999887654221 2224568999999999999999988 999
Q ss_pred EEEEECCCCceEEEeeCCCCC--eEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEc
Q psy9598 746 IKIWDAFNGDLVQVLKGHTNE--VFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWS 823 (1915)
Q Consensus 746 I~vwD~~tg~~i~~l~gH~~~--V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafS 823 (1915)
|++||+....++..+.||... |..-||...+..++++|+.|+.|+||+..++++ +..+. +|...|.+|+|+
T Consensus 419 i~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkl--l~~Ls-----GHs~~vNcVswN 491 (519)
T KOG0293|consen 419 IHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKL--LAVLS-----GHSKTVNCVSWN 491 (519)
T ss_pred eEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCce--eEeec-----CCcceeeEEecC
Confidence 999999998999999999764 444567765778999999999999999999999 77665 677899999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCC
Q psy9598 824 P-DGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 824 p-dg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
| +..+||+++.||+|+||.....
T Consensus 492 P~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 492 PADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred CCCHHHhhccCCCCeEEEecCCcc
Confidence 9 6678999999999999998753
No 52
>KOG0266|consensus
Probab=99.96 E-value=3.4e-27 Score=300.42 Aligned_cols=293 Identities=26% Similarity=0.421 Sum_probs=248.1
Q ss_pred EEEEeCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc--eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCe
Q psy9598 511 LATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA--PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587 (1915)
Q Consensus 511 ~~~l~gH-~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~--~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dgt 587 (1915)
...+.+| ...|+|+.|+++|.+|++++.|+.|++|++.++. ....+.+|...|.+++|+|+ +.++++|+.|++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d----~~~l~s~s~D~t 226 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPD----GSYLLSGSDDKT 226 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCC----CcEEEEecCCce
Confidence 4445444 7889999999999999999999999999998877 77788899999999999995 489999999999
Q ss_pred EEEEecccC-ccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCe
Q psy9598 588 IGFWKYKLD-IDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKV 666 (1915)
Q Consensus 588 I~iWDl~~~-~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V 666 (1915)
|++||+... ..+ ..+.+|...|+|++|+|+|++|++|+.|++|+|||+. ...++..+.+|.+.|
T Consensus 227 iriwd~~~~~~~~------------~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~---~~~~~~~l~~hs~~i 291 (456)
T KOG0266|consen 227 LRIWDLKDDGRNL------------KTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVR---TGECVRKLKGHSDGI 291 (456)
T ss_pred EEEeeccCCCeEE------------EEecCCCCceEEEEecCCCCEEEEecCCCcEEEEecc---CCeEEEeeeccCCce
Confidence 999999333 222 2344788999999999999999999999999999994 367788899999999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEEccCCceE--EeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC
Q psy9598 667 DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR--FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 744 (1915)
Q Consensus 667 ~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg 744 (1915)
++++|+++|.+|++++.||.|+|||+.++... ... ....... .+++++|+|++.+|++++. |+
T Consensus 292 s~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-------------~~~~~~~-~~~~~~fsp~~~~ll~~~~-d~ 356 (456)
T KOG0266|consen 292 SGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLL-------------SGAENSA-PVTSVQFSPNGKYLLSASL-DR 356 (456)
T ss_pred EEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecc-------------cCCCCCC-ceeEEEECCCCcEEEEecC-CC
Confidence 99999999999999999999999999998732 111 1111223 7999999999999999998 99
Q ss_pred eEEEEECCCCceEEEeeCCCCCe---EEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEE
Q psy9598 745 QIKIWDAFNGDLVQVLKGHTNEV---FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGK 821 (1915)
Q Consensus 745 ~I~vwD~~tg~~i~~l~gH~~~V---~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~va 821 (1915)
.+++||+..+.++..+.+|...+ ++...++ .+.++++|+.|+.|.+|++.++.. +..+. ++....+..++
T Consensus 357 ~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~sg~~d~~v~~~~~~s~~~--~~~l~----~h~~~~~~~~~ 429 (456)
T KOG0266|consen 357 TLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLST-GGKLIYSGSEDGSVYVWDSSSGGI--LQRLE----GHSKAAVSDLS 429 (456)
T ss_pred eEEEEEccCCcceeeecccCCcceeEecccccC-CCCeEEEEeCCceEEEEeCCccch--hhhhc----CCCCCceeccc
Confidence 99999999999999999998854 3334455 889999999999999999998766 55444 22268899999
Q ss_pred EcCCCCEEEEEe--CCCeEEEEeCC
Q psy9598 822 WSPDGTTCALTD--SYGHLLVYGLG 844 (1915)
Q Consensus 822 fSpdg~~Lasg~--~dG~I~Iwdl~ 844 (1915)
|+|...++++++ .|+.|.+|...
T Consensus 430 ~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 430 SHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cCCCcCeeeecCcCCCceEEEecCC
Confidence 999999999998 78899999754
No 53
>KOG0643|consensus
Probab=99.96 E-value=9.1e-28 Score=259.34 Aligned_cols=296 Identities=20% Similarity=0.293 Sum_probs=241.3
Q ss_pred EecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q psy9598 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 550 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg 550 (1915)
.|.||..+++-|.|+.+|.+|++++.|.++.||-..+|+.+.++.||++.|.|+..+.+..+|++|+.|.++++||+.+|
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeecCCCCeEEEEeccCccCCCcEEEEEe-----CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEE
Q psy9598 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTS-----TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625 (1915)
Q Consensus 551 ~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs-----~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 625 (1915)
++++.+. ...+|..+.|++. +++++.+. ..+.|.++|++.... ......| ...+..+...++.+.
T Consensus 85 k~la~~k-~~~~Vk~~~F~~~----gn~~l~~tD~~mg~~~~v~~fdi~~~~~--~~~s~ep---~~kI~t~~skit~a~ 154 (327)
T KOG0643|consen 85 KQLATWK-TNSPVKRVDFSFG----GNLILASTDKQMGYTCFVSVFDIRDDSS--DIDSEEP---YLKIPTPDSKITSAL 154 (327)
T ss_pred cEEEEee-cCCeeEEEeeccC----CcEEEEEehhhcCcceEEEEEEccCChh--hhcccCc---eEEecCCccceeeee
Confidence 9999987 4568999999984 35655554 346899999885432 1111111 112334458899999
Q ss_pred ECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeeccc
Q psy9598 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705 (1915)
Q Consensus 626 fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~ 705 (1915)
|.|-+.+|++|..||.|.+||+.+. ...+.....|...|+.|+++++..+|++||.|.+.++||+.+.++.....
T Consensus 155 Wg~l~~~ii~Ghe~G~is~~da~~g--~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~--- 229 (327)
T KOG0643|consen 155 WGPLGETIIAGHEDGSISIYDARTG--KELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT--- 229 (327)
T ss_pred ecccCCEEEEecCCCcEEEEEcccC--ceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee---
Confidence 9999999999999999999999533 23445557799999999999999999999999999999999877655332
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe-E------------EEEECCCCceEEEeeCCCCCeEEEEE
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ-I------------KIWDAFNGDLVQVLKGHTNEVFVLES 772 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~-I------------~vwD~~tg~~i~~l~gH~~~V~sl~~ 772 (1915)
...+|++.+++|...+++.+++.+.. | ++|++-..+.+..++||-++|++|+|
T Consensus 230 --------------te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAf 295 (327)
T KOG0643|consen 230 --------------TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAF 295 (327)
T ss_pred --------------ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEE
Confidence 45678999999998888887752211 1 12222223456778999999999999
Q ss_pred ccCCCCEEEEEecCceEEEEECCC
Q psy9598 773 HPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 773 sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
|| +|...++||.||.|+|.-+..
T Consensus 296 hP-dGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 296 HP-DGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred CC-CCcccccCCCCceEEEEEecc
Confidence 99 999999999999999986643
No 54
>KOG1408|consensus
Probab=99.96 E-value=9.3e-27 Score=276.79 Aligned_cols=402 Identities=16% Similarity=0.156 Sum_probs=280.3
Q ss_pred eeeeEEecCCCCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC--CCc
Q psy9598 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGA--DDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV--DKT 541 (1915)
Q Consensus 466 ~~~~~~l~gH~~~V~~vafspdg~~LaTGs--~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~--Dgt 541 (1915)
..+.+.+..|..+++||+||++|+|+|||- ..-.++||++.+...+..|..|.-.|+|++|+|.++||++.+. |-.
T Consensus 68 ~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMI 147 (1080)
T KOG1408|consen 68 CTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMI 147 (1080)
T ss_pred cchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecCCCcEEEeeccccceE
Confidence 344556678889999999999999999985 5668999999999999999999999999999999999997653 445
Q ss_pred EEEEECC----------------------------------------CCceE----------------------------
Q psy9598 542 IRIWNLQ----------------------------------------TLAPI---------------------------- 553 (1915)
Q Consensus 542 IrVWDl~----------------------------------------tg~~~---------------------------- 553 (1915)
|.+||+. .++..
T Consensus 148 Vnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~ 227 (1080)
T KOG1408|consen 148 VNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGV 227 (1080)
T ss_pred EEhhhhhhcccccccccceeEEEEEEccCCceeeeeeeeeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcC
Confidence 5566543 11100
Q ss_pred -------EEe--ecC-----------------CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceecc--
Q psy9598 554 -------SVL--VGH-----------------QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH-- 605 (1915)
Q Consensus 554 -------~~l--~~h-----------------~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~-- 605 (1915)
..+ .|| +...+||+.+ .++|++|+.+|+|++|+..+-.-..++...
T Consensus 228 gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs------~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~ha 301 (1080)
T KOG1408|consen 228 GICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVS------SRLIACGCAKGMVRLFNPETLDYAGTLPRSHA 301 (1080)
T ss_pred cccccceEEEecccceeeechhhhhhhhhhhhccccceeeee------cceEEEeeccceeeecCcchhhhccccccccc
Confidence 000 000 0112233333 378889999999999987654433332221
Q ss_pred ---------Cc-cccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCC-
Q psy9598 606 ---------EP-VMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS- 674 (1915)
Q Consensus 606 ---------~~-~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspd- 674 (1915)
.+ ..+.....+..-....+.|++....|.+...|+.|+|||++..........+--|...|++|..-|-
T Consensus 302 lg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~n 381 (1080)
T KOG1408|consen 302 LGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCN 381 (1080)
T ss_pred cccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeecccccc
Confidence 00 0001111111223457889999999999999999999999877766677777789999988876551
Q ss_pred ----------CCEEEEEeCCCcEEEEEccCCceEEe----eec--c--------cc------c-CCCCcccccccccccc
Q psy9598 675 ----------HLRFVSGSRDGTALIWYYKCSQWRFI----RLD--M--------NT------C-LPHTKETSDETNKKIK 723 (1915)
Q Consensus 675 ----------g~~L~sgs~DG~I~IWDl~~~~~~~~----~~~--~--------~~------~-~~~~~~~~~~~~~~~~ 723 (1915)
...|++|+.||+|++|++.....-.+ .+. + .. . ................
T Consensus 382 v~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G 461 (1080)
T KOG1408|consen 382 VHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFG 461 (1080)
T ss_pred ccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccc
Confidence 12699999999999999876321110 000 0 00 0 0001111223345678
Q ss_pred EEEEEECCCCCEEEEEEecCCeEEEEECCCCc----------------------------------------------eE
Q psy9598 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGD----------------------------------------------LV 757 (1915)
Q Consensus 724 V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~----------------------------------------------~i 757 (1915)
+.+++.+|+|++|++|.. .|.|+||++...+ ++
T Consensus 462 ~R~~~vSp~gqhLAsGDr-~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~ 540 (1080)
T KOG1408|consen 462 FRALAVSPDGQHLASGDR-GGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLV 540 (1080)
T ss_pred eEEEEECCCcceecccCc-cCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchh
Confidence 999999999999999988 8999999874321 22
Q ss_pred EEeeCCCCCeEEEEEccC------------------------------------------------CCCEEEEEecCceE
Q psy9598 758 QVLKGHTNEVFVLESHPF------------------------------------------------DSRVLLSAGHDGLI 789 (1915)
Q Consensus 758 ~~l~gH~~~V~sl~~sp~------------------------------------------------dg~~LaSgs~DG~I 789 (1915)
+++.+|...|++|.|.-. ...++++++.|..|
T Consensus 541 qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrni 620 (1080)
T KOG1408|consen 541 QTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNI 620 (1080)
T ss_pred hhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccce
Confidence 344567766666654320 34578899999999
Q ss_pred EEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCCC------ceeecCCCC
Q psy9598 790 IIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR------ELFFHTDYR 863 (1915)
Q Consensus 790 ~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~------~~~F~~d~~ 863 (1915)
+||++.+++. .+.|.. ...+.|....+...|.|.+||+.++|.+|.+||+.+++++.++-+ .+.|.+|.+
T Consensus 621 rif~i~sgKq--~k~FKg--s~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCk 696 (1080)
T KOG1408|consen 621 RIFDIESGKQ--VKSFKG--SRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCK 696 (1080)
T ss_pred EEEeccccce--eeeecc--cccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccch
Confidence 9999999998 777761 123347788899999999999999999999999999999987765 589999999
Q ss_pred eeeecCC-Cccceeec
Q psy9598 864 TLNRPNG-LFEPTYDE 878 (1915)
Q Consensus 864 ~Lv~~~~-~~~~v~D~ 878 (1915)
.|+..++ +.+-||-+
T Consensus 697 HlISvsgDgCIFvW~l 712 (1080)
T KOG1408|consen 697 HLISVSGDGCIFVWKL 712 (1080)
T ss_pred hheeecCCceEEEEEC
Confidence 9984433 22339965
No 55
>KOG0265|consensus
Probab=99.96 E-value=2.8e-27 Score=259.96 Aligned_cols=288 Identities=17% Similarity=0.292 Sum_probs=239.6
Q ss_pred EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC-CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeE
Q psy9598 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~-tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI 588 (1915)
++..+.||.+.|+.+.|+|+|.+||||+.|..|.+|++. ..+...++.+|.+.|..+.|.+ ++..|++++.|.+|
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~----d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMR----DGSHILSCGTDKTV 114 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeecc----CCCEEEEecCCceE
Confidence 445678999999999999999999999999999999964 4566778899999999999998 45999999999999
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCee
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVD 667 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~ 667 (1915)
+.||+.+++.+.... .|...|+++.-+.-| .+|.+|+.||+++|||++... .+.++ .....++
T Consensus 115 ~~wD~~tG~~~rk~k------------~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~---~~~t~-~~kyqlt 178 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHK------------GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE---AIKTF-ENKYQLT 178 (338)
T ss_pred EEEecccceeeehhc------------cccceeeecCccccCCeEEEecCCCceEEEEeecccc---hhhcc-ccceeEE
Confidence 999999997655443 445667777744444 356778899999999996432 22222 2356789
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEE
Q psy9598 668 SIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIK 747 (1915)
Q Consensus 668 sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~ 747 (1915)
++.|...+..+++|+-|+.|++||++.+...++ ..+|...|+.+..+++|.++++-+. |.+++
T Consensus 179 Av~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~----------------lsGh~DtIt~lsls~~gs~llsnsM-d~tvr 241 (338)
T KOG0265|consen 179 AVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYT----------------LSGHADTITGLSLSRYGSFLLSNSM-DNTVR 241 (338)
T ss_pred EEEecccccceeeccccCceeeeccccCcceEE----------------eecccCceeeEEeccCCCccccccc-cceEE
Confidence 999999999999999999999999988765442 4568899999999999999999888 99999
Q ss_pred EEECCC----CceEEEeeCCCC----CeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEE
Q psy9598 748 IWDAFN----GDLVQVLKGHTN----EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFD 819 (1915)
Q Consensus 748 vwD~~t----g~~i~~l~gH~~----~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~ 819 (1915)
+||++- ..++..+.+|.. ....++|+| ++..+.+|+.|..|++||..+... +..+. .|.+.|.+
T Consensus 242 vwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp-~~~~i~ags~dr~vyvwd~~~r~~--lyklp-----Gh~gsvn~ 313 (338)
T KOG0265|consen 242 VWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSP-NGTKITAGSADRFVYVWDTTSRRI--LYKLP-----GHYGSVNE 313 (338)
T ss_pred EEEecccCCCCceEEEeecchhhhhhhcceeeccC-CCCccccccccceEEEeecccccE--EEEcC-----CcceeEEE
Confidence 999874 456888888754 456788999 999999999999999999987665 44444 67799999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEe
Q psy9598 820 GKWSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 820 vafSpdg~~Lasg~~dG~I~Iwd 842 (1915)
++|+|...+|.++++|.+|++=.
T Consensus 314 ~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 314 VDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred eeecCCCcEEEEeccCceeEeec
Confidence 99999999999999999998743
No 56
>KOG1474|consensus
Probab=99.96 E-value=7.8e-29 Score=320.62 Aligned_cols=223 Identities=25% Similarity=0.395 Sum_probs=166.5
Q ss_pred ChHHHHhhcccccCCHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCCCCcc--hhhhhccccCCCC
Q psy9598 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPV--VYHELLQNYETSS 78 (1915)
Q Consensus 1 L~tI~~kl~~~~Y~~~~ef~~D~~li~~Na~~yN~p~s~I~~~A~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (1915)
++||++++.+++|....++++||..+|.||+.||.+.-.|+.++..+.+++.+.+..++...... .............
T Consensus 37 ~~~~~~~~e~n~~~~~~~~~~~f~~~~sn~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 116 (640)
T KOG1474|consen 37 IGTIEKRVENNYYFSASECIADFKTKFSNCYLFNDSGDDVVRMKQSLEKLFPKKLRSMPSDEEDKSSVGPKASKIPLDKD 116 (640)
T ss_pred chhhhhhhccCccccHhhhhhhccccccchhcccCCccchhhccccchhhcccccccccccccCCcccccccccCcCCCC
Confidence 47999999999999999999999999999999999999999999999999877777776321111 0000000000000
Q ss_pred ------------------------Ccc--------------cc----------cccccccc---cccCCCC-c-chhh-h
Q psy9598 79 ------------------------SEE--------------EE----------EEDSKSRQ---RRVRPTA-V-TRAQ-R 104 (1915)
Q Consensus 79 ------------------------~~~--------------~~----------~~~~~~~~---~~~~~~~-~-~~~~-~ 104 (1915)
.-+ .- ..+...++ ...+... . .+.. .
T Consensus 117 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 196 (640)
T KOG1474|consen 117 SSSQVRKLSERLKQELQQVRPLTKAVEFSPEPSVVSPVSPASQPFKSKNGVKKVADTCVKSYKSKSEREPSPGQKREGTV 196 (640)
T ss_pred chhhhhhhhhccccccccCCcccccccccccccccCCCCCcccccccccchhhhhccccccccccCcCCCCccccccccc
Confidence 000 00 00000000 0000000 0 0000 0
Q ss_pred h-------------hhhccccCCchhHHHHHHHHHHHHhcCCCCCCCCCCCC--CCCCCCccccCCCcCCHHHHHHHhcC
Q psy9598 105 E-------------AMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRG 169 (1915)
Q Consensus 105 ~-------------~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~F~~pvd--~~~~pdY~~iIk~Pmdl~ti~~kl~~ 169 (1915)
. .......+....+.+.|..||+.|++|+++|||+.||| .+++||||+|||+||||+||++||.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~C~~iLk~l~~~k~awpF~~PVD~v~LgLpDY~~IIK~PMDLgTIK~kL~~ 276 (640)
T KOG1474|consen 197 APNSSRESGDSAAEEEAKPKSKLTVELLKQCLSILKRLMKHKHAWPFNEPVDVVKLGLPDYHDIIKHPMDLGTIKKKLEK 276 (640)
T ss_pred cCccccccccccccccccccccccHHHHHHHHHHHHHHHhccCCCCcCCCcCHHhcCCcchhhhcCCCccHHHHHhhhcc
Confidence 0 11122344556789999999999999999999999999 89999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy9598 170 DNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNS 224 (1915)
Q Consensus 170 ~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s~i~~~a~~l~~~f~~~~~~~~~~~~~ 224 (1915)
+.|.++.+|+.||+|||.|||+||+++ ++||.||+.|+++|+.+|+.+...+..
T Consensus 277 ~~Y~~~~eF~~DVRL~F~Ncm~YNp~g-~dV~~Ma~~L~~~Fe~rw~~~~~~~~~ 330 (640)
T KOG1474|consen 277 GEYKSAEEFAADVRLTFDNCMTYNPEG-SDVYAMAKKLQEVFEERWASMPLEIEE 330 (640)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999987 999999999999999999998877653
No 57
>KOG0313|consensus
Probab=99.96 E-value=3.1e-27 Score=266.47 Aligned_cols=290 Identities=21% Similarity=0.349 Sum_probs=243.0
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEeccc
Q psy9598 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~ 595 (1915)
.|...|.+|... +.+|++|+.||+++|||.. |++...+.||+++|.+++|.-... ....|+++|.|.++++|-+..
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~-~~~~fvsas~Dqtl~Lw~~~~ 178 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNS-SSCLFVSASMDQTLRLWKWNV 178 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCC-ccceEEEecCCceEEEEEecC
Confidence 388889988877 6799999999999999975 899999999999999888875431 334799999999999999887
Q ss_pred CccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecC----------------------CCCC
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG----------------------VDSP 653 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~----------------------~~~~ 653 (1915)
+....... ....+|...|-|++..++|..+++|+.|.+|.||+... ....
T Consensus 179 ~~~~~~~~--------~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r 250 (423)
T KOG0313|consen 179 GENKVKAL--------KVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTR 250 (423)
T ss_pred chhhhhHH--------hHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhccccc
Confidence 75432221 22338899999999999999999999999999999321 1233
Q ss_pred ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCC
Q psy9598 654 LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733 (1915)
Q Consensus 654 ~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg 733 (1915)
..+..+.||..+|.+|.|++ ...++++|.|.+|+.||+.++...... .....++++..++..
T Consensus 251 ~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~-----------------~~~ksl~~i~~~~~~ 312 (423)
T KOG0313|consen 251 TPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTL-----------------TTNKSLNCISYSPLS 312 (423)
T ss_pred CceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeee-----------------ecCcceeEeeccccc
Confidence 45678899999999999998 668999999999999999998854321 245678999999999
Q ss_pred CEEEEEEecCCeEEEEECCCCc---eEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCc-cccceeeeeee
Q psy9598 734 RWVITAINFNFQIKIWDAFNGD---LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK-QRGYKWFHNIV 809 (1915)
Q Consensus 734 ~~L~t~s~~Dg~I~vwD~~tg~---~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~-~~~~~~~~~~~ 809 (1915)
.+|++|++ |..|++||.+++. ..++|.||.+.|.++.|+|.+..+|++|+.||++++||+++.. + +..+.
T Consensus 313 ~Ll~~gss-dr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~p--lydI~--- 386 (423)
T KOG0313|consen 313 KLLASGSS-DRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAP--LYDIA--- 386 (423)
T ss_pred ceeeecCC-CCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCc--ceeec---
Confidence 99999998 9999999998753 4668889999999999999888999999999999999999877 4 44444
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9598 810 EGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 810 ~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
.|...|.++.|+ +|..|++|+.|.+|+|+...
T Consensus 387 --~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 387 --GHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred --cCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence 567899999998 46789999999999999654
No 58
>KOG0640|consensus
Probab=99.96 E-value=3.2e-27 Score=258.54 Aligned_cols=297 Identities=17% Similarity=0.262 Sum_probs=241.0
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC------------C------cEEEEEeCCCCCEEEEEEeCCCC
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD------------G------KLLATLRGCSGEISDIAIDNRNI 531 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t------------g------~~~~~l~gH~~~I~~Lafspdg~ 531 (1915)
..+..|.+++.|.+|++||.++||||.|..|+|+|+.. | -.+++|-.|...|++|.|+|...
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 45778999999999999999999999999999999861 1 26788999999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEe--ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccc
Q psy9598 532 LLAAGTVDKTIRIWNLQTLAPISVL--VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 609 (1915)
Q Consensus 532 ~LaSgs~DgtIrVWDl~tg~~~~~l--~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~ 609 (1915)
.|++|+.|++|+++|+........+ .....+|.+|.|+|. |.+|+.|..-.++++||+.+-++.....
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPs----GefllvgTdHp~~rlYdv~T~Qcfvsan------ 255 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPS----GEFLLVGTDHPTLRLYDVNTYQCFVSAN------ 255 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCC----CceEEEecCCCceeEEeccceeEeeecC------
Confidence 9999999999999999753322222 124568999999995 5999999999999999999886533222
Q ss_pred cccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEe-ccCCC-CeeEEEEcCCCCEEEEEeCCCcE
Q psy9598 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV-EEHSD-KVDSIQWSHSHLRFVSGSRDGTA 687 (1915)
Q Consensus 610 ~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l-~~h~~-~V~sl~fspdg~~L~sgs~DG~I 687 (1915)
.-..|.+.|+++.+++.|++.++|+.||.|+|||- -...++.++ .+|.+ .|.+..|..+|+++++++.|..|
T Consensus 256 ---Pd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDG---VS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~v 329 (430)
T KOG0640|consen 256 ---PDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDG---VSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTV 329 (430)
T ss_pred ---cccccccceeEEEecCCccEEEEeccCCcEEeecc---ccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCccee
Confidence 12357789999999999999999999999999996 233444444 34544 68889999999999999999999
Q ss_pred EEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-CCCCC
Q psy9598 688 LIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-GHTNE 766 (1915)
Q Consensus 688 ~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-gH~~~ 766 (1915)
++|.+.++.++......... +....-+...|+....|++.-....+.+.-||.+++..+..+. ||++.
T Consensus 330 kLWEi~t~R~l~~YtGAg~t-----------grq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a 398 (430)
T KOG0640|consen 330 KLWEISTGRMLKEYTGAGTT-----------GRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGA 398 (430)
T ss_pred eeeeecCCceEEEEecCCcc-----------cchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCC
Confidence 99999999977655433211 1112223456777788888777667889999999987766664 99999
Q ss_pred eEEEEEccCCCCEEEEEecCceEEEEEC
Q psy9598 767 VFVLESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 767 V~sl~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
+..+.-+| .+..++|||.|-.+++|--
T Consensus 399 ~R~i~HSP-~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 399 VRWIVHSP-VEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred ceEEEeCC-CCCceeeecccceeeeeee
Confidence 99999999 8888999999999999964
No 59
>KOG0278|consensus
Probab=99.96 E-value=1.1e-27 Score=255.76 Aligned_cols=293 Identities=19% Similarity=0.237 Sum_probs=253.7
Q ss_pred EEEeCCCCCEEEEEEeC---CCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeE
Q psy9598 512 ATLRGCSGEISDIAIDN---RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588 (1915)
Q Consensus 512 ~~l~gH~~~I~~Lafsp---dg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI 588 (1915)
.+..||+.+|..|+||| +|-+|++++.|+.-.+-+-.+|.-+.+|.||.+.|++.....+ ....++++.|-+.
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~n----a~~aasaaadfta 83 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKN----ATRAASAAADFTA 83 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCch----hhhhhhhcccchh
Confidence 46789999999999975 8999999999999998899999999999999999999988763 4778899999999
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeE
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDS 668 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~s 668 (1915)
++||.-++..+..+ .|..-|..++|+.|..+|++|+.+..++|||++... .....+.+|.+.|..
T Consensus 84 kvw~a~tgdelhsf-------------~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~--App~E~~ghtg~Ir~ 148 (334)
T KOG0278|consen 84 KVWDAVTGDELHSF-------------EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK--APPKEISGHTGGIRT 148 (334)
T ss_pred hhhhhhhhhhhhhh-------------hhhheeeeEEecccchhhhccchHHHhhhhhccCCC--CCchhhcCCCCccee
Confidence 99999888654443 244678999999999999999999999999996443 334567899999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEE
Q psy9598 669 IQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKI 748 (1915)
Q Consensus 669 l~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~v 748 (1915)
+.|+.....|++++.|++|++||.+++..+... .....|+++-++++|++|.++. .+.|.+
T Consensus 149 v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL-----------------~~~s~VtSlEvs~dG~ilTia~--gssV~F 209 (334)
T KOG0278|consen 149 VLWCHEDKCILSSADDKTVRLWDHRTGTEVQSL-----------------EFNSPVTSLEVSQDGRILTIAY--GSSVKF 209 (334)
T ss_pred EEEeccCceEEeeccCCceEEEEeccCcEEEEE-----------------ecCCCCcceeeccCCCEEEEec--CceeEE
Confidence 999999999999999999999999998855432 2456789999999999988876 478999
Q ss_pred EECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCE
Q psy9598 749 WDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTT 828 (1915)
Q Consensus 749 wD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~ 828 (1915)
||..+..++..+.... .|.+...+| +..++++|+.|+.++.||..++.. +..+ ..+|+++|.|+.|+|||..
T Consensus 210 wdaksf~~lKs~k~P~-nV~SASL~P-~k~~fVaGged~~~~kfDy~TgeE--i~~~----nkgh~gpVhcVrFSPdGE~ 281 (334)
T KOG0278|consen 210 WDAKSFGLLKSYKMPC-NVESASLHP-KKEFFVAGGEDFKVYKFDYNTGEE--IGSY----NKGHFGPVHCVRFSPDGEL 281 (334)
T ss_pred eccccccceeeccCcc-ccccccccC-CCceEEecCcceEEEEEeccCCce--eeec----ccCCCCceEEEEECCCCce
Confidence 9999999998887554 488999999 779999999999999999999988 4443 2467899999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCcccc
Q psy9598 829 CALTDSYGHLLVYGLGGFKRPQ 850 (1915)
Q Consensus 829 Lasg~~dG~I~Iwdl~s~~~~~ 850 (1915)
.|+|+.||+|+||.+..++...
T Consensus 282 yAsGSEDGTirlWQt~~~~~~~ 303 (334)
T KOG0278|consen 282 YASGSEDGTIRLWQTTPGKTYG 303 (334)
T ss_pred eeccCCCceEEEEEecCCCchh
Confidence 9999999999999998876654
No 60
>KOG0288|consensus
Probab=99.95 E-value=3.7e-28 Score=276.38 Aligned_cols=286 Identities=26% Similarity=0.343 Sum_probs=244.5
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK--LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 547 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~--~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl 547 (1915)
..+..|.+.|..+.|-++...|+||+.|..|++|++..++ ++.+|.|..+.|+++.|.+++.++++++.|+.+++|++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv 248 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV 248 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence 4677899999999999998999999999999999987766 78889999999999999999999999999999999999
Q ss_pred CCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEEC
Q psy9598 548 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 627 (1915)
Q Consensus 548 ~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs 627 (1915)
..++..++|.||++.|+++.|.-.. ..+++|+.|.+|++||+....+..+..+. ..+..|+.+
T Consensus 249 d~~r~~~TLsGHtdkVt~ak~~~~~----~~vVsgs~DRtiK~WDl~k~~C~kt~l~~-------------S~cnDI~~~ 311 (459)
T KOG0288|consen 249 DSLRLRHTLSGHTDKVTAAKFKLSH----SRVVSGSADRTIKLWDLQKAYCSKTVLPG-------------SQCNDIVCS 311 (459)
T ss_pred cchhhhhhhcccccceeeehhhccc----cceeeccccchhhhhhhhhhheecccccc-------------ccccceEec
Confidence 9999999999999999999998743 44999999999999999987665554433 334444444
Q ss_pred CCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeeccccc
Q psy9598 628 PGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTC 707 (1915)
Q Consensus 628 pdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~ 707 (1915)
+..+++|..|+.|++||+++ ..+......+. .|++|..+++|..|++++.|.++.+.|+++.+.........
T Consensus 312 --~~~~~SgH~DkkvRfwD~Rs---~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g-- 383 (459)
T KOG0288|consen 312 --ISDVISGHFDKKVRFWDIRS---ADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEG-- 383 (459)
T ss_pred --ceeeeecccccceEEEeccC---CceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccc--
Confidence 55789999999999999843 34455555554 99999999999999999999999999999988655432111
Q ss_pred CCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCC--CeEEEEEccCCCCEEEEEec
Q psy9598 708 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN--EVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 708 ~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~--~V~sl~~sp~dg~~LaSgs~ 785 (1915)
......++.++|||++.|+++|+. ||.|+||++.++++...+..... .|++++|+| .|..|++++.
T Consensus 384 ----------~k~asDwtrvvfSpd~~YvaAGS~-dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~-sG~~Llsadk 451 (459)
T KOG0288|consen 384 ----------FKCASDWTRVVFSPDGSYVAAGSA-DGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNP-SGSGLLSADK 451 (459)
T ss_pred ----------cccccccceeEECCCCceeeeccC-CCcEEEEEccCceEEEEeccCCCCcceEEEEEcC-CCchhhcccC
Confidence 112344888999999999999999 99999999999999999886554 499999999 9999999999
Q ss_pred CceEEEE
Q psy9598 786 DGLIIIW 792 (1915)
Q Consensus 786 DG~I~IW 792 (1915)
++.+.+|
T Consensus 452 ~~~v~lW 458 (459)
T KOG0288|consen 452 QKAVTLW 458 (459)
T ss_pred CcceEec
Confidence 9999999
No 61
>KOG1539|consensus
Probab=99.95 E-value=4.2e-26 Score=278.39 Aligned_cols=366 Identities=18% Similarity=0.291 Sum_probs=293.4
Q ss_pred ccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEE
Q psy9598 446 REYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA 525 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~La 525 (1915)
..+-|+..+.+.+|.. ..-++++++.+|.+.|+|+.=+|-=..+|.|..+|+|.|+++..++.+.+|+.-.+.|++|+
T Consensus 174 KIvvGs~~G~lql~Nv--rt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslS 251 (910)
T KOG1539|consen 174 KIVVGSSQGRLQLWNV--RTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLS 251 (910)
T ss_pred eEEEeecCCcEEEEEe--ccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEE
Confidence 3445788888889854 44567789999999999999999999999999999999999999999999995569999999
Q ss_pred EeCCCC-EEEEEeCCCcEEEEECCCCceEEEee-cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccce-
Q psy9598 526 IDNRNI-LLAAGTVDKTIRIWNLQTLAPISVLV-GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT- 602 (1915)
Q Consensus 526 fspdg~-~LaSgs~DgtIrVWDl~tg~~~~~l~-~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~- 602 (1915)
|.-||. +||+|+..|.+.+||++..+.+..+. .|.+.|+.+.|.|. ...|++++.|..+++|=.+++.....+
T Consensus 252 FrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~----epVl~ta~~DnSlk~~vfD~~dg~pR~L 327 (910)
T KOG1539|consen 252 FRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPG----EPVLVTAGADNSLKVWVFDSGDGVPRLL 327 (910)
T ss_pred eccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCC----CceEeeccCCCceeEEEeeCCCCcchhe
Confidence 999987 56777778999999999888777666 78899999999984 478999999999888855422110000
Q ss_pred -------------ec-------------------------------cC--------cc-cc-------------------
Q psy9598 603 -------------VF-------------------------------HE--------PV-MF------------------- 610 (1915)
Q Consensus 603 -------------~~-------------------------------~~--------~~-~~------------------- 610 (1915)
.+ .. .. .+
T Consensus 328 R~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~R 407 (910)
T KOG1539|consen 328 RSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAR 407 (910)
T ss_pred eeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccch
Confidence 00 00 00 00
Q ss_pred ---------------------------cc------ccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeE
Q psy9598 611 ---------------------------NE------RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGIL 657 (1915)
Q Consensus 611 ---------------------------~~------~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~ 657 (1915)
.. .+......+++++.++.|++.+.|+..|.|-+|++..+-......
T Consensus 408 E~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~ 487 (910)
T KOG1539|consen 408 EKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFG 487 (910)
T ss_pred hhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccc
Confidence 00 011123668899999999999999999999999994332222222
Q ss_pred EeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEE
Q psy9598 658 EVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVI 737 (1915)
Q Consensus 658 ~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~ 737 (1915)
.-..|.++|++|+....++.+++++.+|.+++||+.....+.. ......+.++..+.....++
T Consensus 488 ~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~-----------------l~l~~~~~~iv~hr~s~l~a 550 (910)
T KOG1539|consen 488 DSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKS-----------------LRLGSSITGIVYHRVSDLLA 550 (910)
T ss_pred cCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeee-----------------eccCCCcceeeeeehhhhhh
Confidence 2368999999999999899999999999999999987763221 11345567778888888888
Q ss_pred EEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcce
Q psy9598 738 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGAL 817 (1915)
Q Consensus 738 t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V 817 (1915)
+++. |-.|.++|..+.+.++.|.||.+.|++++||| +|++|++++.|++|++||+.++.+ +..+. -..+.
T Consensus 551 ~~~d-df~I~vvD~~t~kvvR~f~gh~nritd~~FS~-DgrWlisasmD~tIr~wDlpt~~l--ID~~~------vd~~~ 620 (910)
T KOG1539|consen 551 IALD-DFSIRVVDVVTRKVVREFWGHGNRITDMTFSP-DGRWLISASMDSTIRTWDLPTGTL--IDGLL------VDSPC 620 (910)
T ss_pred hhcC-ceeEEEEEchhhhhhHHhhccccceeeeEeCC-CCcEEEEeecCCcEEEEeccCcce--eeeEe------cCCcc
Confidence 8888 99999999999999999999999999999999 999999999999999999999998 55554 34678
Q ss_pred EEEEEcCCCCEEEEEeCC-CeEEEEeCC
Q psy9598 818 FDGKWSPDGTTCALTDSY-GHLLVYGLG 844 (1915)
Q Consensus 818 ~~vafSpdg~~Lasg~~d-G~I~Iwdl~ 844 (1915)
+++.|||+|.+||++..| .-|++|.=.
T Consensus 621 ~sls~SPngD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 621 TSLSFSPNGDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred eeeEECCCCCEEEEEEecCceEEEEEch
Confidence 999999999999999988 569999633
No 62
>KOG0772|consensus
Probab=99.95 E-value=5.3e-27 Score=272.03 Aligned_cols=302 Identities=14% Similarity=0.165 Sum_probs=238.0
Q ss_pred eEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc----EEEEE-eCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Q psy9598 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK----LLATL-RGCSGEISDIAIDNRNILLAAGTVDKTIR 543 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~----~~~~l-~gH~~~I~~Lafspdg~~LaSgs~DgtIr 543 (1915)
...|.+|+..|.++++.|.|-+|+|||.|.+|++||+.... ..+.| ..-...|.+++|++.|..|++.+....++
T Consensus 160 Ei~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqak 239 (641)
T KOG0772|consen 160 EIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAK 239 (641)
T ss_pred eEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCccee
Confidence 34678999999999999999999999999999999986432 22222 22345799999999999998888888999
Q ss_pred EEECCCCceEE------------EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccc
Q psy9598 544 IWNLQTLAPIS------------VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 611 (1915)
Q Consensus 544 VWDl~tg~~~~------------~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~ 611 (1915)
|+|-.....+. .-.||...++|.+|+|.. ...+++++.||+++|||+.............+
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~---k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~---- 312 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN---KEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKP---- 312 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCc---ccceEEecCCCcEEEEecCCchhheeEEeecc----
Confidence 99976433322 235899999999999964 58999999999999999987654333222211
Q ss_pred cccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCC--CeeEEEEcCCCCEEEEEeCCCcEEE
Q psy9598 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD--KVDSIQWSHSHLRFVSGSRDGTALI 689 (1915)
Q Consensus 612 ~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~--~V~sl~fspdg~~L~sgs~DG~I~I 689 (1915)
..+....++.|+|+++|.+||+|+.||.|.+|+..+......+..-.+|.. .|+||.||++|++|++-+.|+++++
T Consensus 313 --~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKv 390 (641)
T KOG0772|consen 313 --AGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKV 390 (641)
T ss_pred --CCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceee
Confidence 124456789999999999999999999999999855444444555678887 8999999999999999999999999
Q ss_pred EEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe-----cCCeEEEEECCCCceEEEeeCCC
Q psy9598 690 WYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN-----FNFQIKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 690 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~-----~Dg~I~vwD~~tg~~i~~l~gH~ 764 (1915)
||++........ .........-+.++|||+..+|++|.+ ..|.+.+||..+...+..+.-..
T Consensus 391 WDLrq~kkpL~~-------------~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~ 457 (641)
T KOG0772|consen 391 WDLRQFKKPLNV-------------RTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIST 457 (641)
T ss_pred eeccccccchhh-------------hcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCC
Confidence 999876521100 001112334467899999999999875 35689999999999999998888
Q ss_pred CCeEEEEEccCCCCEEEEEecCceEEEEE
Q psy9598 765 NEVFVLESHPFDSRVLLSAGHDGLIIIWD 793 (1915)
Q Consensus 765 ~~V~sl~~sp~dg~~LaSgs~DG~I~IWd 793 (1915)
..|..+.||| .-+.|+.|+.||+++||=
T Consensus 458 aSvv~~~Whp-kLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 458 ASVVRCLWHP-KLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred ceEEEEeecc-hhhheeeecCCCceEEEE
Confidence 8899999999 777788888899998863
No 63
>KOG0313|consensus
Probab=99.95 E-value=8.4e-27 Score=263.02 Aligned_cols=294 Identities=19% Similarity=0.294 Sum_probs=239.5
Q ss_pred CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCC---CEEEEEeCCCcEEEEECCCC
Q psy9598 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN---ILLAAGTVDKTIRIWNLQTL 550 (1915)
Q Consensus 474 gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg---~~LaSgs~DgtIrVWDl~tg 550 (1915)
-|.+.|.+|... +.+|+||+.||+++|||. .|+.+.++.||.++|.+++|...+ ..|+++|.|.++++|-++.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 588999999888 789999999999999996 899999999999999988885433 36999999999999999876
Q ss_pred ce----EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc--ccceec-----------cCccccccc
Q psy9598 551 AP----ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID--ISKTVF-----------HEPVMFNER 613 (1915)
Q Consensus 551 ~~----~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~--~~~~~~-----------~~~~~~~~~ 613 (1915)
.. +..-.||...|-+|...+ ++..+++||.|.+|.||+..+... +..... ...-.....
T Consensus 180 ~~~~~~~~~~~GHk~~V~sVsv~~----sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vt 255 (423)
T KOG0313|consen 180 ENKVKALKVCRGHKRSVDSVSVDS----SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVT 255 (423)
T ss_pred hhhhhHHhHhcccccceeEEEecC----CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEE
Confidence 54 334459999999999988 458999999999999999322211 000000 011112234
Q ss_pred cCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 614 IRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 614 ~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
+.+|...|.++.|++ ...+++++.|++|+.||+... ..+..+. ....++||.+++...+|++|+.|..|++||.+
T Consensus 256 l~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg---~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR 330 (423)
T KOG0313|consen 256 LEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETG---GLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPR 330 (423)
T ss_pred ecccccceeeEEEcC-CCceEeecccceEEEEEeecc---cceeeee-cCcceeEeecccccceeeecCCCCceeecCCC
Confidence 668999999999998 568999999999999999543 3333332 34578999999999999999999999999998
Q ss_pred CCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc-eEEEeeCCCCCeEEEEE
Q psy9598 694 CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD-LVQVLKGHTNEVFVLES 772 (1915)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~-~i~~l~gH~~~V~sl~~ 772 (1915)
++.- ......+.+|.+.|.++.|+|...+++++++.|+++++||+++.. ++..+.+|...|.++.|
T Consensus 331 ~~~g-------------s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW 397 (423)
T KOG0313|consen 331 TGDG-------------SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDW 397 (423)
T ss_pred CCCC-------------ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEec
Confidence 7752 122345677999999999999999988887779999999999877 99999999999999999
Q ss_pred ccCCCCEEEEEecCceEEEEEC
Q psy9598 773 HPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 773 sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
+. +.+|+|||.|.+|+|+.-
T Consensus 398 ~~--~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 398 NE--GGLIVSGGADNKLRIFKG 417 (423)
T ss_pred cC--CceEEeccCcceEEEecc
Confidence 84 789999999999999864
No 64
>KOG0285|consensus
Probab=99.95 E-value=3.2e-27 Score=263.28 Aligned_cols=275 Identities=18% Similarity=0.304 Sum_probs=236.1
Q ss_pred ccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEE
Q psy9598 446 REYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA 525 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~La 525 (1915)
-+.+|+.|+++.||+.....++ .+|.||...|..|+||+-..||++++.|+.|+.||+...+.++.+.||-+.|.||+
T Consensus 165 wf~tgs~DrtikIwDlatg~Lk--ltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~ 242 (460)
T KOG0285|consen 165 WFATGSADRTIKIWDLATGQLK--LTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLD 242 (460)
T ss_pred eEEecCCCceeEEEEcccCeEE--EeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEe
Confidence 3568999999999987666554 58999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceecc
Q psy9598 526 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 605 (1915)
Q Consensus 526 fspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~ 605 (1915)
.+|.-..|++|+.|.+++|||+++...++++.||..+|.++.+.|.. ..+++||.|++|++||+..+.....+.
T Consensus 243 lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~d----pqvit~S~D~tvrlWDl~agkt~~tlt-- 316 (460)
T KOG0285|consen 243 LHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTD----PQVITGSHDSTVRLWDLRAGKTMITLT-- 316 (460)
T ss_pred ccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCC----CceEEecCCceEEEeeeccCceeEeee--
Confidence 99999999999999999999999999999999999999999999855 689999999999999999886544333
Q ss_pred CccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC
Q psy9598 606 EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685 (1915)
Q Consensus 606 ~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG 685 (1915)
.|...|.|++.+|....+|+++.| .|+-|++ .....+..+.+|+.-|++++...+| ++++|+..|
T Consensus 317 ----------~hkksvral~lhP~e~~fASas~d-nik~w~~---p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng 381 (460)
T KOG0285|consen 317 ----------HHKKSVRALCLHPKENLFASASPD-NIKQWKL---PEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNG 381 (460)
T ss_pred ----------cccceeeEEecCCchhhhhccCCc-cceeccC---CccchhhccccccceeeeeeeccCc-eEEEcCCce
Confidence 456789999999999999999887 6899998 4445566689999999999988776 789999999
Q ss_pred cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 686 ~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
.|.+||.+++-...... .............|.+.||+..|..|++|.. |.+|++|.-.
T Consensus 382 ~~~fwdwksg~nyQ~~~--------t~vqpGSl~sEagI~as~fDktg~rlit~ea-dKtIk~~keD 439 (460)
T KOG0285|consen 382 SIMFWDWKSGHNYQRGQ--------TIVQPGSLESEAGIFASCFDKTGSRLITGEA-DKTIKMYKED 439 (460)
T ss_pred EEEEEecCcCccccccc--------ccccCCccccccceeEEeecccCceEEeccC-CcceEEEecc
Confidence 99999999876332110 0111122234578999999999999999998 9999999743
No 65
>KOG0643|consensus
Probab=99.95 E-value=7.7e-27 Score=252.20 Aligned_cols=297 Identities=16% Similarity=0.221 Sum_probs=241.5
Q ss_pred EEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEe
Q psy9598 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592 (1915)
Q Consensus 513 ~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWD 592 (1915)
.+.||..+|+.|.++.+|.+|+||+.|.++.||--.+|+.+.++.||++.|+|+...-. ...|++|+.|.++++||
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~----s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWD----SKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCC----cceeeeccccceeEEEE
Confidence 36799999999999999999999999999999999999999999999999999999864 48999999999999999
Q ss_pred cccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-----CCeEEEEEecCCC----CCceeEEeccCC
Q psy9598 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-----DHHVRVYKMDGVD----SPLGILEVEEHS 663 (1915)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-----Dg~I~IwDl~~~~----~~~~i~~l~~h~ 663 (1915)
+.+++++....+. ..|..+.|+.+|++++.... .+.|.++|++... ...++..+..+.
T Consensus 81 v~tGk~la~~k~~-------------~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~ 147 (327)
T KOG0643|consen 81 VETGKQLATWKTN-------------SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD 147 (327)
T ss_pred cCCCcEEEEeecC-------------CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc
Confidence 9999987777665 77899999999998877654 4689999996332 344567778888
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecC
Q psy9598 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 743 (1915)
Q Consensus 664 ~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~D 743 (1915)
+.++.+.|.|-+.+|++|..||.|.+||++++.... .....|...|+.++++++..++++++. |
T Consensus 148 skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v---------------~s~~~h~~~Ind~q~s~d~T~FiT~s~-D 211 (327)
T KOG0643|consen 148 SKITSALWGPLGETIIAGHEDGSISIYDARTGKELV---------------DSDEEHSSKINDLQFSRDRTYFITGSK-D 211 (327)
T ss_pred cceeeeeecccCCEEEEecCCCcEEEEEcccCceee---------------echhhhccccccccccCCcceEEeccc-C
Confidence 999999999999999999999999999999886332 122346779999999999999999999 9
Q ss_pred CeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCc-eEEEEECCCCccccceeeeee-------ecCCCCc
Q psy9598 744 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG-LIIIWDILSSKQRGYKWFHNI-------VEGQGEG 815 (1915)
Q Consensus 744 g~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG-~I~IWdl~s~~~~~~~~~~~~-------~~~~~~~ 815 (1915)
.+.++||+.+.+++.++. ...+|++.+++|....+++.||.+. -|.-=+.+.|+. ...|... ....|.|
T Consensus 212 ttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKF--EArFyh~i~eEEigrvkGHFG 288 (327)
T KOG0643|consen 212 TTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKF--EARFYHLIFEEEIGRVKGHFG 288 (327)
T ss_pred ccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeecccccch--hhhHHHHHHHHHhcccccccc
Confidence 999999999999999987 4458999999995555555555442 122222222221 1111100 0125779
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 816 ALFDGKWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 816 ~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
+|.+++|+|+|...++|+.||.|+|..+..
T Consensus 289 PINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 289 PINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred CcceeEECCCCcccccCCCCceEEEEEecc
Confidence 999999999999999999999999987654
No 66
>KOG1539|consensus
Probab=99.95 E-value=3.9e-25 Score=269.97 Aligned_cols=407 Identities=19% Similarity=0.203 Sum_probs=310.4
Q ss_pred ccCccccccCCCeEEEecccCC----ceeeeEEecCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCcEEEEEeC
Q psy9598 443 LRSREYSGPLSRSLMISSHKYS----NLRQHYVNLGHLSAVFCVLFDKL--GEVIVTGADDLLIKLWRARDGKLLATLRG 516 (1915)
Q Consensus 443 l~~r~~tg~~d~~~~i~~~~~~----~~~~~~~l~gH~~~V~~vafspd--g~~LaTGs~Dg~I~IWd~~tg~~~~~l~g 516 (1915)
...-.+++..++.+.+|..... .++ ...+..-.+.|+++. +|. =+-|+.|+.+|.++||++.+++.++++.+
T Consensus 123 fGe~lia~d~~~~l~vw~~s~~~~e~~l~-~~~~~~~~~~Ital~-HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~ 200 (910)
T KOG1539|consen 123 FGEHLIAVDISNILFVWKTSSIQEELYLQ-STFLKVEGDFITALL-HPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQE 200 (910)
T ss_pred ecceEEEEEccCcEEEEEecccccccccc-ceeeeccCCceeeEe-cchhheeeEEEeecCCcEEEEEeccCcEEEEecc
Confidence 3344556677888888865442 222 112222223377764 453 35688999999999999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccC
Q psy9598 517 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLD 596 (1915)
Q Consensus 517 H~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~ 596 (1915)
+...|+++.-+|-=..+|.|..+|+|.|+++..++.+.++....+.|++++|..++ ..++++|+..|.+.+||+...
T Consensus 201 ~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG---~p~las~~~~G~m~~wDLe~k 277 (910)
T KOG1539|consen 201 FFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDG---NPLLASGRSNGDMAFWDLEKK 277 (910)
T ss_pred cccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCC---CeeEEeccCCceEEEEEcCCC
Confidence 99999999999988899999999999999999999999998657999999999754 478888999999999999877
Q ss_pred ccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCC-CCCceeEEeccCCCCeeEEEEc-CC
Q psy9598 597 IDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV-DSPLGILEVEEHSDKVDSIQWS-HS 674 (1915)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~-~~~~~i~~l~~h~~~V~sl~fs-pd 674 (1915)
..+.... ..|.+.|..+.|.+....|++++.|..+++|=.+.. ..+..+..-.||..+..||.|. .+
T Consensus 278 kl~~v~~-----------nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~ 346 (910)
T KOG1539|consen 278 KLINVTR-----------NAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQ 346 (910)
T ss_pred eeeeeee-----------ccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccC
Confidence 5433222 245678899999999999999999999998876533 3355556668999999999998 77
Q ss_pred CCEEEEEeCCCcEEEEEccCCce----EE-----------ee------------e-------------------------
Q psy9598 675 HLRFVSGSRDGTALIWYYKCSQW----RF-----------IR------------L------------------------- 702 (1915)
Q Consensus 675 g~~L~sgs~DG~I~IWDl~~~~~----~~-----------~~------------~------------------------- 702 (1915)
|.++.+++.|++++.+++..... .. .. .
T Consensus 347 g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~t 426 (910)
T KOG1539|consen 347 GHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYT 426 (910)
T ss_pred cEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEE
Confidence 88999999999988887642110 00 00 0
Q ss_pred -cccccCC-CC-ccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEe---eCCCCCeEEEEEccCC
Q psy9598 703 -DMNTCLP-HT-KETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL---KGHTNEVFVLESHPFD 776 (1915)
Q Consensus 703 -~~~~~~~-~~-~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l---~gH~~~V~sl~~sp~d 776 (1915)
....... .+ ............+++++.++.|++.+.|.+ .|.|-+|++.+|-....+ ..|.++|++|+... .
T Consensus 427 W~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S-~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~-~ 504 (910)
T KOG1539|consen 427 WNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYS-KGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDG-T 504 (910)
T ss_pred EeccCcccccEEecCccccccCcceEEEEEeccCceEEEecc-CCeEEEEEcccCeeecccccCccccCceeEEEecC-C
Confidence 0000000 00 000011113467899999999999999999 999999999999999888 58999999999987 7
Q ss_pred CCEEEEEecCceEEEEECCCCccccceeee-------------------------e-ee----------cCCCCcceEEE
Q psy9598 777 SRVLLSAGHDGLIIIWDILSSKQRGYKWFH-------------------------N-IV----------EGQGEGALFDG 820 (1915)
Q Consensus 777 g~~LaSgs~DG~I~IWdl~s~~~~~~~~~~-------------------------~-~~----------~~~~~~~V~~v 820 (1915)
++.++|++.+|.+.+||...... +..+. . ++ .-+|.+.|+++
T Consensus 505 n~~~vsa~~~Gilkfw~f~~k~l--~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~ 582 (910)
T KOG1539|consen 505 NRLLVSAGADGILKFWDFKKKVL--KKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDM 582 (910)
T ss_pred CceEEEccCcceEEEEecCCcce--eeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeee
Confidence 88999999999999999977552 11100 0 00 01356789999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCcccccC-----CCceeecCCCCeeeecC
Q psy9598 821 KWSPDGTTCALTDSYGHLLVYGLGGFKRPQNI-----PRELFFHTDYRTLNRPN 869 (1915)
Q Consensus 821 afSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l-----~~~~~F~~d~~~Lv~~~ 869 (1915)
+|||||++|++++.|++|++||+.++.++-.+ ...+.|+|+|..|+...
T Consensus 583 ~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~H 636 (910)
T KOG1539|consen 583 TFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVH 636 (910)
T ss_pred EeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEE
Confidence 99999999999999999999999999887554 33789999999998543
No 67
>KOG0278|consensus
Probab=99.95 E-value=7.3e-27 Score=249.47 Aligned_cols=290 Identities=17% Similarity=0.262 Sum_probs=250.4
Q ss_pred EEecCCCCcEEEEEEc---CCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Q psy9598 470 YVNLGHLSAVFCVLFD---KLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafs---pdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWD 546 (1915)
.+..||+.+|..++|| |+|-+|++++.||.-.+-+-.||..+.+|.||.+.|.+.+++.+....|+++.|-+.+|||
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~ 87 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWD 87 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhh
Confidence 3556999999999998 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEE
Q psy9598 547 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 547 l~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f 626 (1915)
.-+|..++.|. |..-|.+++|+.+ .++|++|+.+..++|||+..... ....+.+|.+.|..+.|
T Consensus 88 a~tgdelhsf~-hkhivk~~af~~d----s~~lltgg~ekllrvfdln~p~A-----------pp~E~~ghtg~Ir~v~w 151 (334)
T KOG0278|consen 88 AVTGDELHSFE-HKHIVKAVAFSQD----SNYLLTGGQEKLLRVFDLNRPKA-----------PPKEISGHTGGIRTVLW 151 (334)
T ss_pred hhhhhhhhhhh-hhheeeeEEeccc----chhhhccchHHHhhhhhccCCCC-----------CchhhcCCCCcceeEEE
Confidence 99999999885 8889999999984 49999999999999999876542 12234578899999999
Q ss_pred CCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccc
Q psy9598 627 SPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT 706 (1915)
Q Consensus 627 spdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~ 706 (1915)
....+.|++.+.|++|++||.++. ..+..+ ....+|+++.++++|.+|.+ ...+.|.+||..+...+..
T Consensus 152 c~eD~~iLSSadd~tVRLWD~rTg---t~v~sL-~~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf~~lKs------ 220 (334)
T KOG0278|consen 152 CHEDKCILSSADDKTVRLWDHRTG---TEVQSL-EFNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSFGLLKS------ 220 (334)
T ss_pred eccCceEEeeccCCceEEEEeccC---cEEEEE-ecCCCCcceeeccCCCEEEE-ecCceeEEeccccccceee------
Confidence 999999999999999999999543 334433 34678999999999976555 4667899999887664331
Q ss_pred cCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEe-eCCCCCeEEEEEccCCCCEEEEEec
Q psy9598 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL-KGHTNEVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 707 ~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l-~gH~~~V~sl~~sp~dg~~LaSgs~ 785 (1915)
......|.+.+++|+..++++|+. |+.++.||..+|..+..+ ++|-++|.||.|+| +|.+.++|+.
T Consensus 221 -----------~k~P~nV~SASL~P~k~~fVaGge-d~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP-dGE~yAsGSE 287 (334)
T KOG0278|consen 221 -----------YKMPCNVESASLHPKKEFFVAGGE-DFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSP-DGELYASGSE 287 (334)
T ss_pred -----------ccCccccccccccCCCceEEecCc-ceEEEEEeccCCceeeecccCCCCceEEEEECC-CCceeeccCC
Confidence 123456888999999988888888 999999999999999986 89999999999999 9999999999
Q ss_pred CceEEEEECCCCcc
Q psy9598 786 DGLIIIWDILSSKQ 799 (1915)
Q Consensus 786 DG~I~IWdl~s~~~ 799 (1915)
||+|+||....++.
T Consensus 288 DGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 288 DGTIRLWQTTPGKT 301 (334)
T ss_pred CceEEEEEecCCCc
Confidence 99999999977665
No 68
>KOG0274|consensus
Probab=99.95 E-value=8e-26 Score=286.11 Aligned_cols=278 Identities=24% Similarity=0.408 Sum_probs=243.7
Q ss_pred CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE-EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q psy9598 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT-LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP 552 (1915)
Q Consensus 474 gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~-l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~ 552 (1915)
.|...|+|..|. +.++++|+.+++|++|+..++..+.+ +.||.+.|.+++|...+.+|++|+.|.+++|||+.+|.+
T Consensus 206 ~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C 283 (537)
T KOG0274|consen 206 TDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGEC 283 (537)
T ss_pred cCcchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcE
Confidence 367889999999 67999999999999999999999988 999999999999998888999999999999999999999
Q ss_pred EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 553 ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 553 ~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
++++.+|...|.++...+ .++++|+.|.+|++|++.++..+..+ .+|.+.|.|+.++ +.+
T Consensus 284 ~~~l~gh~stv~~~~~~~------~~~~sgs~D~tVkVW~v~n~~~l~l~------------~~h~~~V~~v~~~--~~~ 343 (537)
T KOG0274|consen 284 THSLQGHTSSVRCLTIDP------FLLVSGSRDNTVKVWDVTNGACLNLL------------RGHTGPVNCVQLD--EPL 343 (537)
T ss_pred EEEecCCCceEEEEEccC------ceEeeccCCceEEEEeccCcceEEEe------------ccccccEEEEEec--CCE
Confidence 999999999999999987 78899999999999999987654333 2467999999998 779
Q ss_pred EEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC-ceEEeeecccccCCCC
Q psy9598 633 LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS-QWRFIRLDMNTCLPHT 711 (1915)
Q Consensus 633 Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~-~~~~~~~~~~~~~~~~ 711 (1915)
|++|+.||+|+|||+. ...++..+.+|.+.|.++.+... .++++|+.|++|++||+.+. +++.
T Consensus 344 lvsgs~d~~v~VW~~~---~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~------------ 407 (537)
T KOG0274|consen 344 LVSGSYDGTVKVWDPR---TGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIH------------ 407 (537)
T ss_pred EEEEecCceEEEEEhh---hceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhh------------
Confidence 9999999999999994 67889999999999999988765 79999999999999999988 5433
Q ss_pred ccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC-CCCCeEEEEEccCCCCEEEEEecCceEE
Q psy9598 712 KETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG-HTNEVFVLESHPFDSRVLLSAGHDGLII 790 (1915)
Q Consensus 712 ~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g-H~~~V~sl~~sp~dg~~LaSgs~DG~I~ 790 (1915)
...+|..-+..+. ..+.+|++++. |++|++||..+++++.++.+ |.+.|+++++. ...+++++.||++.
T Consensus 408 ----tl~~h~~~v~~l~--~~~~~Lvs~~a-D~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~---~~~il~s~~~~~~~ 477 (537)
T KOG0274|consen 408 ----TLQGHTSLVSSLL--LRDNFLVSSSA-DGTIKLWDAEEGECLRTLEGRHVGGVSALALG---KEEILCSSDDGSVK 477 (537)
T ss_pred ----hhcCCcccccccc--cccceeEeccc-cccEEEeecccCceeeeeccCCcccEEEeecC---cceEEEEecCCeeE
Confidence 2233444454443 45778888887 99999999999999999999 77889988875 36789999999999
Q ss_pred EEECCCCcc
Q psy9598 791 IWDILSSKQ 799 (1915)
Q Consensus 791 IWdl~s~~~ 799 (1915)
+||+.++..
T Consensus 478 l~dl~~~~~ 486 (537)
T KOG0274|consen 478 LWDLRSGTL 486 (537)
T ss_pred EEecccCch
Confidence 999999988
No 69
>KOG1446|consensus
Probab=99.95 E-value=8.6e-25 Score=243.82 Aligned_cols=296 Identities=15% Similarity=0.260 Sum_probs=244.1
Q ss_pred eeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC--CCcEE
Q psy9598 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV--DKTIR 543 (1915)
Q Consensus 466 ~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~--DgtIr 543 (1915)
++..+.|..-.+.|++|.|+.+|.+|++++.|.+|+|||..+|+.+.++..+.-.|..++|......++.++. |.+||
T Consensus 4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence 4444556666789999999999999999999999999999999999999988889999999888777777776 88999
Q ss_pred EEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEE
Q psy9598 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 623 (1915)
Q Consensus 544 VWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 623 (1915)
..++.+.+.+..+.||...|++|+.+|.. ..+++++.|++|++||++...+...+... .-.+
T Consensus 84 yLsl~dNkylRYF~GH~~~V~sL~~sP~~----d~FlS~S~D~tvrLWDlR~~~cqg~l~~~--------------~~pi 145 (311)
T KOG1446|consen 84 YLSLHDNKYLRYFPGHKKRVNSLSVSPKD----DTFLSSSLDKTVRLWDLRVKKCQGLLNLS--------------GRPI 145 (311)
T ss_pred EEEeecCceEEEcCCCCceEEEEEecCCC----CeEEecccCCeEEeeEecCCCCceEEecC--------------CCcc
Confidence 99999999999999999999999999954 89999999999999999987665444332 2346
Q ss_pred EEECCCCcEEEEEeCCCeEEEEEecCC-CCCceeEEec-cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEee
Q psy9598 624 SSFSPGGLFLATGSGDHHVRVYKMDGV-DSPLGILEVE-EHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 701 (1915)
Q Consensus 624 l~fspdg~~Lasgs~Dg~I~IwDl~~~-~~~~~i~~l~-~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~ 701 (1915)
++|.|.|-++|+|.....|++||++.. ..+.....+. +.....+.|.|+|+|++|+.++..+.+.+.|.-+|......
T Consensus 146 ~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tf 225 (311)
T KOG1446|consen 146 AAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTF 225 (311)
T ss_pred eeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeE
Confidence 899999999999988889999999764 3344444444 55677899999999999999999999999998888744322
Q ss_pred ecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC-CCCCeEEEEEccCCCCEE
Q psy9598 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG-HTNEVFVLESHPFDSRVL 780 (1915)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g-H~~~V~sl~~sp~dg~~L 780 (1915)
... .....--...+|+|++.+|++|.. ||+|.+|++.+|..+..+.+ +.+++.++.|+| .+.
T Consensus 226 s~~-------------~~~~~~~~~a~ftPds~Fvl~gs~-dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP---~~~ 288 (311)
T KOG1446|consen 226 SGY-------------PNAGNLPLSATFTPDSKFVLSGSD-DGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNP---RYA 288 (311)
T ss_pred eec-------------cCCCCcceeEEECCCCcEEEEecC-CCcEEEEEcCCCcEeeEecCCCCCCccccccCC---cee
Confidence 111 111111256889999999999998 99999999999999999998 789999999999 444
Q ss_pred EEEecCceEEEEECCC
Q psy9598 781 LSAGHDGLIIIWDILS 796 (1915)
Q Consensus 781 aSgs~DG~I~IWdl~s 796 (1915)
.-++.+..+.+|=...
T Consensus 289 mf~sa~s~l~fw~p~~ 304 (311)
T KOG1446|consen 289 MFVSASSNLVFWLPDE 304 (311)
T ss_pred eeeecCceEEEEeccc
Confidence 4444566788886543
No 70
>KOG1407|consensus
Probab=99.95 E-value=1.1e-25 Score=242.76 Aligned_cols=277 Identities=19% Similarity=0.271 Sum_probs=238.4
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE--EEeCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEE
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA--TLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~--~l~gH~~~I~~Lafspd-g~~LaSgs~DgtIrVWD 546 (1915)
+.+.+|...|.+|+|+.+|..|++|+.|+++.||++..+.... ...||.+.|-.++|+|. ..+|++++.|.+|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 5678999999999999999999999999999999998876554 35799999999999874 56899999999999999
Q ss_pred CCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEE
Q psy9598 547 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 547 l~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f 626 (1915)
+.+++++..+....+.| -+.|+|. +.+++.++.|..|.+.|.++.+......+. ..+.-++|
T Consensus 94 ~r~~k~~~~i~~~~eni-~i~wsp~----g~~~~~~~kdD~it~id~r~~~~~~~~~~~-------------~e~ne~~w 155 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENI-NITWSPD----GEYIAVGNKDDRITFIDARTYKIVNEEQFK-------------FEVNEISW 155 (313)
T ss_pred eccCcEEEEeeccCcce-EEEEcCC----CCEEEEecCcccEEEEEecccceeehhccc-------------ceeeeeee
Confidence 99999999887655554 5789994 589999999999999999887654443333 55778899
Q ss_pred CCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccc
Q psy9598 627 SPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT 706 (1915)
Q Consensus 627 spdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~ 706 (1915)
+-++.+++.....|+|.|... .....+..+.+|.....||.|+|+|++|++|+.|..+.+||+...-|...
T Consensus 156 ~~~nd~Fflt~GlG~v~ILsy---psLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~------ 226 (313)
T KOG1407|consen 156 NNSNDLFFLTNGLGCVEILSY---PSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERC------ 226 (313)
T ss_pred cCCCCEEEEecCCceEEEEec---cccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhee------
Confidence 988888888888899999988 46677888999999999999999999999999999999999986654432
Q ss_pred cCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecC
Q psy9598 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 707 ~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D 786 (1915)
...+.-+|..+.||.+|++|++++. |..|-|=++.+|..+..+. |.++.+.|+||| ...+||-++.|
T Consensus 227 ----------isRldwpVRTlSFS~dg~~lASaSE-Dh~IDIA~vetGd~~~eI~-~~~~t~tVAWHP-k~~LLAyA~dd 293 (313)
T KOG1407|consen 227 ----------ISRLDWPVRTLSFSHDGRMLASASE-DHFIDIAEVETGDRVWEIP-CEGPTFTVAWHP-KRPLLAYACDD 293 (313)
T ss_pred ----------eccccCceEEEEeccCcceeeccCc-cceEEeEecccCCeEEEee-ccCCceeEEecC-CCceeeEEecC
Confidence 2335678999999999999999998 9999999999999999986 788899999999 88888887765
No 71
>KOG1407|consensus
Probab=99.94 E-value=2.9e-25 Score=239.63 Aligned_cols=288 Identities=21% Similarity=0.324 Sum_probs=242.4
Q ss_pred EEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEE--EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEE
Q psy9598 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS--VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 512 ~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~--~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~ 589 (1915)
..+.+|.+.|.+|+|+.+|..|++|+.|+++.||++..+.... ...+|.+.|-.++|+|.. ...|++++.|.+|+
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~---~d~~atas~dk~ir 90 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKH---PDLFATASGDKTIR 90 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCC---CcceEEecCCceEE
Confidence 4567899999999999999999999999999999998775544 456899999999999965 48999999999999
Q ss_pred EEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEE
Q psy9598 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSI 669 (1915)
Q Consensus 590 iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl 669 (1915)
+||++.+++....... +.-.-++|+|+|.++++|+.|..|.+.|.+... +..-....-.+.-+
T Consensus 91 ~wd~r~~k~~~~i~~~-------------~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~----~~~~~~~~~e~ne~ 153 (313)
T KOG1407|consen 91 IWDIRSGKCTARIETK-------------GENINITWSPDGEYIAVGNKDDRITFIDARTYK----IVNEEQFKFEVNEI 153 (313)
T ss_pred EEEeccCcEEEEeecc-------------CcceEEEEcCCCCEEEEecCcccEEEEEecccc----eeehhcccceeeee
Confidence 9999999876555433 223458899999999999999999999985322 22223345567888
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEE
Q psy9598 670 QWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIW 749 (1915)
Q Consensus 670 ~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vw 749 (1915)
+|+.++.+|+.....|+|.|-.+...+ .......|.....||.|+|+|+++++|+. |..+.+|
T Consensus 154 ~w~~~nd~Fflt~GlG~v~ILsypsLk----------------pv~si~AH~snCicI~f~p~GryfA~GsA-DAlvSLW 216 (313)
T KOG1407|consen 154 SWNNSNDLFFLTNGLGCVEILSYPSLK----------------PVQSIKAHPSNCICIEFDPDGRYFATGSA-DALVSLW 216 (313)
T ss_pred eecCCCCEEEEecCCceEEEEeccccc----------------cccccccCCcceEEEEECCCCceEeeccc-cceeecc
Confidence 999888888888888999997654332 33445668889999999999999999999 9999999
Q ss_pred ECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEE
Q psy9598 750 DAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTC 829 (1915)
Q Consensus 750 D~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~L 829 (1915)
|+...-|++.+.-+.-+|..|.|+. +|++||+|+.|..|-|=++.+|.. +..++ +.++.+.|+|+|...+|
T Consensus 217 D~~ELiC~R~isRldwpVRTlSFS~-dg~~lASaSEDh~IDIA~vetGd~--~~eI~------~~~~t~tVAWHPk~~LL 287 (313)
T KOG1407|consen 217 DVDELICERCISRLDWPVRTLSFSH-DGRMLASASEDHFIDIAEVETGDR--VWEIP------CEGPTFTVAWHPKRPLL 287 (313)
T ss_pred ChhHhhhheeeccccCceEEEEecc-CcceeeccCccceEEeEecccCCe--EEEee------ccCCceeEEecCCCcee
Confidence 9999999999999999999999998 999999999999999999999987 55443 67899999999999999
Q ss_pred EEEeCC---------CeEEEEeCCC
Q psy9598 830 ALTDSY---------GHLLVYGLGG 845 (1915)
Q Consensus 830 asg~~d---------G~I~Iwdl~s 845 (1915)
|.+++| |+|+||++.+
T Consensus 288 AyA~ddk~~d~~reag~vKiFG~~~ 312 (313)
T KOG1407|consen 288 AYACDDKDGDSNREAGTVKIFGLSN 312 (313)
T ss_pred eEEecCCCCccccccceeEEecCCC
Confidence 998755 6788888754
No 72
>KOG0289|consensus
Probab=99.94 E-value=1.8e-25 Score=255.40 Aligned_cols=284 Identities=19% Similarity=0.316 Sum_probs=245.9
Q ss_pred CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe
Q psy9598 477 SAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL 556 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l 556 (1915)
-.|+++...+....++||+.|..+.++|..+++.+.+|.||+..|+.+.|+++...+++++.|..|+||......+...+
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~ 299 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSS 299 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccc
Confidence 56788888887789999999999999999999999999999999999999999999999999999999999888888889
Q ss_pred ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEE
Q psy9598 557 VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 636 (1915)
Q Consensus 557 ~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasg 636 (1915)
..|..+|+.+..+|. +.||++++.||+..|.|+.++.++...... .....+++++|+|||.+|.+|
T Consensus 300 ~~h~~~V~~ls~h~t----geYllsAs~d~~w~Fsd~~~g~~lt~vs~~----------~s~v~~ts~~fHpDgLifgtg 365 (506)
T KOG0289|consen 300 RPHEEPVTGLSLHPT----GEYLLSASNDGTWAFSDISSGSQLTVVSDE----------TSDVEYTSAAFHPDGLIFGTG 365 (506)
T ss_pred ccccccceeeeeccC----CcEEEEecCCceEEEEEccCCcEEEEEeec----------cccceeEEeeEcCCceEEecc
Confidence 999999999999995 499999999999999999999765444322 123568999999999999999
Q ss_pred eCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccc
Q psy9598 637 SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSD 716 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1915)
..||.|+|||+. .+..+..+.+|+++|.+|+|+.+|-+|++++.|+.|++||++........
T Consensus 366 t~d~~vkiwdlk---s~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~--------------- 427 (506)
T KOG0289|consen 366 TPDGVVKIWDLK---SQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTI--------------- 427 (506)
T ss_pred CCCceEEEEEcC---CccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhccccee---------------
Confidence 999999999993 34467789999999999999999999999999999999999876522211
Q ss_pred cccccccEEEEEECCCCCEEEEEEecCCeEEEEECC--CCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEEC
Q psy9598 717 ETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF--NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 717 ~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~--tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
.......|.+++|+..|.+|+++++ +-.|++++-. ++.++..+..|.+..+++.|.. ...+++++|.|..++|+.+
T Consensus 428 ~l~~~~~v~s~~fD~SGt~L~~~g~-~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~-~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 428 QLDEKKEVNSLSFDQSGTYLGIAGS-DLQVYICKKKTKSWTEIKELADHSGLSTGVRFGE-HAQYLASTSMDAILRLYAL 505 (506)
T ss_pred eccccccceeEEEcCCCCeEEeecc-eeEEEEEecccccceeeehhhhcccccceeeecc-cceEEeeccchhheEEeec
Confidence 1112337899999999999999977 7677776633 5678888889999999999988 8899999999999888764
No 73
>KOG0283|consensus
Probab=99.94 E-value=7.3e-26 Score=280.28 Aligned_cols=257 Identities=19% Similarity=0.331 Sum_probs=202.7
Q ss_pred CceeeeEEec-CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC--------------------------------C--
Q psy9598 464 SNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD--------------------------------G-- 508 (1915)
Q Consensus 464 ~~~~~~~~l~-gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t--------------------------------g-- 508 (1915)
..+.....+. +|.++|+|+.||+||+|||+||.||.|+||.+.. .
T Consensus 254 sal~~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 254 SALTVVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred eeeEEeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 3444555666 9999999999999999999999999999998654 0
Q ss_pred --------------------------cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCC
Q psy9598 509 --------------------------KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGI 562 (1915)
Q Consensus 509 --------------------------~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~ 562 (1915)
++++.|.||.+.|.+|.||.++ +|+|+|.|.|||+|++....|+.+|. |.+.
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-Hndf 411 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDF 411 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCe
Confidence 1335567999999999999865 89999999999999999999999996 9999
Q ss_pred eEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeE
Q psy9598 563 ITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642 (1915)
Q Consensus 563 V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I 642 (1915)
|+||+|+|. |.++|++||-||.|+||++...+.+....+. .-|++++|+|+|...++|+.+|.+
T Consensus 412 VTcVaFnPv---DDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-------------~lITAvcy~PdGk~avIGt~~G~C 475 (712)
T KOG0283|consen 412 VTCVAFNPV---DDRYFISGSLDGKVRLWSISDKKVVDWNDLR-------------DLITAVCYSPDGKGAVIGTFNGYC 475 (712)
T ss_pred eEEEEeccc---CCCcEeecccccceEEeecCcCeeEeehhhh-------------hhheeEEeccCCceEEEEEeccEE
Confidence 999999995 6799999999999999999877544333332 679999999999999999999999
Q ss_pred EEEEecCCCCCceeEEeccC------CCCeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccc
Q psy9598 643 RVYKMDGVDSPLGILEVEEH------SDKVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETS 715 (1915)
Q Consensus 643 ~IwDl~~~~~~~~i~~l~~h------~~~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~ 715 (1915)
++|++.+..-. .-..+.-| ...|++++|.|... .+++.+.|..|+|+|++....+..+...
T Consensus 476 ~fY~t~~lk~~-~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~----------- 543 (712)
T KOG0283|consen 476 RFYDTEGLKLV-SDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGF----------- 543 (712)
T ss_pred EEEEccCCeEE-EeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccc-----------
Confidence 99998543211 11111111 22799999997544 6888899999999999765533221110
Q ss_pred ccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC
Q psy9598 716 DETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 754 (1915)
Q Consensus 716 ~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg 754 (1915)
.....-....|+.||++|++++. |..|+||+....
T Consensus 544 ---~n~~SQ~~Asfs~Dgk~IVs~se-Ds~VYiW~~~~~ 578 (712)
T KOG0283|consen 544 ---RNTSSQISASFSSDGKHIVSASE-DSWVYIWKNDSF 578 (712)
T ss_pred ---ccCCcceeeeEccCCCEEEEeec-CceEEEEeCCCC
Confidence 11222345788999999999997 999999998543
No 74
>KOG0973|consensus
Probab=99.94 E-value=2.6e-25 Score=281.29 Aligned_cols=314 Identities=19% Similarity=0.264 Sum_probs=250.4
Q ss_pred CCCCEEEEEEeCCCCEEEEEe--CCCcEEEEECCC------------CceEEEeecCCCCeEEEEeccCccCCCcEEEEE
Q psy9598 517 CSGEISDIAIDNRNILLAAGT--VDKTIRIWNLQT------------LAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582 (1915)
Q Consensus 517 H~~~I~~Lafspdg~~LaSgs--~DgtIrVWDl~t------------g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg 582 (1915)
+...|.+|..+|+|..+|||+ .||.++||+... ...+.++..|.+.|+|+.|+| +|.+||+|
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~----dG~~lAsG 87 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP----DGSYLASG 87 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC----CCCeEeec
Confidence 355699999999999999999 899999998753 234667788999999999999 55999999
Q ss_pred eCCCeEEEEecccCcccccee-------ccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCce
Q psy9598 583 STDGCIGFWKYKLDIDISKTV-------FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLG 655 (1915)
Q Consensus 583 s~DgtI~iWDl~~~~~~~~~~-------~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~ 655 (1915)
|.|+.|.||.... ....... ..........+.+|.+.|..++|+|++.+|++++.|++|.||+.. +...
T Consensus 88 SDD~~v~iW~~~~-~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~---tF~~ 163 (942)
T KOG0973|consen 88 SDDRLVMIWERAE-IGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK---TFEL 163 (942)
T ss_pred cCcceEEEeeecc-cCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccc---ccee
Confidence 9999999999874 1111111 001122334567899999999999999999999999999999984 4477
Q ss_pred eEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCE
Q psy9598 656 ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 735 (1915)
Q Consensus 656 i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~ 735 (1915)
+..+.+|.+.|..+.|.|-|++|++-+.|++|+||.+..-....... ...........+..+.|||||.+
T Consensus 164 ~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It----------~pf~~~~~~T~f~RlSWSPDG~~ 233 (942)
T KOG0973|consen 164 LKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSIT----------KPFEESPLTTFFLRLSWSPDGHH 233 (942)
T ss_pred eeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeec----------cchhhCCCcceeeecccCCCcCe
Confidence 88899999999999999999999999999999999866543332211 11122334556788999999999
Q ss_pred EEEEEecC---CeEEEEECCCCceEEEeeCCCCCeEEEEEccC------C------CC----EEEEEecCceEEEEECCC
Q psy9598 736 VITAINFN---FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPF------D------SR----VLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 736 L~t~s~~D---g~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~------d------g~----~LaSgs~DG~I~IWdl~s 796 (1915)
|++....+ .++.|.+-.+.+.-..|-||.+++.++.|+|. . +. ++|+||.|++|.||....
T Consensus 234 las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~ 313 (942)
T KOG0973|consen 234 LASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL 313 (942)
T ss_pred ecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC
Confidence 99876533 36888888888888899999999999999982 1 11 788999999999999977
Q ss_pred CccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCCC
Q psy9598 797 SKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR 854 (1915)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~ 854 (1915)
.++ +...+++ ....|.+++|+|||..|.+++.||+|.++.+...+.-..++.
T Consensus 314 ~RP--l~vi~~l----f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ElG~~ls~ 365 (942)
T KOG0973|consen 314 PRP--LFVIHNL----FNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKELGVALSE 365 (942)
T ss_pred CCc--hhhhhhh----hcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHHhCcccCh
Confidence 766 5544422 346899999999999999999999999999998766555544
No 75
>KOG0300|consensus
Probab=99.94 E-value=1.8e-25 Score=244.87 Aligned_cols=296 Identities=21% Similarity=0.341 Sum_probs=247.1
Q ss_pred ceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Q psy9598 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRI 544 (1915)
Q Consensus 465 ~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrV 544 (1915)
.+.+.+.|.||.+.|+.|+.......+.|++.|.+.+||.+.+|.|+.++.||.+.|+||.|++.+.++++++.|++..|
T Consensus 137 ~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHI 216 (481)
T KOG0300|consen 137 KFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHI 216 (481)
T ss_pred eEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHH
Confidence 35667788999999999999988889999999999999999999999999999999999999999999999999999999
Q ss_pred EECC------C----------------------------------CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC
Q psy9598 545 WNLQ------T----------------------------------LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 584 (1915)
Q Consensus 545 WDl~------t----------------------------------g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~ 584 (1915)
|... . ..++..|.+|.+.|.+..|.. +++.+++++.
T Consensus 217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~----gg~Q~vTaSW 292 (481)
T KOG0300|consen 217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA----GGQQMVTASW 292 (481)
T ss_pred HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc----Ccceeeeeec
Confidence 9621 0 123567889999999999987 5699999999
Q ss_pred CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCC
Q psy9598 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD 664 (1915)
Q Consensus 585 DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~ 664 (1915)
|.+..+||+.++..+..+ .+|....+.++-+|..+++++.+.|.+.++||++ .....+..+.||..
T Consensus 293 DRTAnlwDVEtge~v~~L------------tGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFR--eaI~sV~VFQGHtd 358 (481)
T KOG0300|consen 293 DRTANLWDVETGEVVNIL------------TGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFR--EAIQSVAVFQGHTD 358 (481)
T ss_pred cccceeeeeccCceeccc------------cCcchhccccccCCcceEEEEeccCceeEeccch--hhcceeeeeccccc
Confidence 999999999998754443 3566778888999999999999999999999996 55567788999999
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC
Q psy9598 665 KVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 744 (1915)
Q Consensus 665 ~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg 744 (1915)
.|+++.|.-+ ..+++|+.|.+|+|||+++..... ........++.++.+..+..|+.-.. +.
T Consensus 359 tVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRspl----------------ATIRtdS~~NRvavs~g~~iIAiPhD-NR 420 (481)
T KOG0300|consen 359 TVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSPL----------------ATIRTDSPANRVAVSKGHPIIAIPHD-NR 420 (481)
T ss_pred ceeEEEEecC-CceeecCCCceEEEeeeccccCcc----------------eeeecCCccceeEeecCCceEEeccC-Cc
Confidence 9999999865 469999999999999998765211 11124567788999888888888776 88
Q ss_pred eEEEEECCCCceEEE-----eeCCCCCeEEEEEccCC-CCEEEEEecCceEEEEECCCC
Q psy9598 745 QIKIWDAFNGDLVQV-----LKGHTNEVFVLESHPFD-SRVLLSAGHDGLIIIWDILSS 797 (1915)
Q Consensus 745 ~I~vwD~~tg~~i~~-----l~gH~~~V~sl~~sp~d-g~~LaSgs~DG~I~IWdl~s~ 797 (1915)
.|++||+.. ..+.. -+||..-|+|++|.... -.-|++||.|..+.-|.+...
T Consensus 421 qvRlfDlnG-~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 421 QVRLFDLNG-NRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred eEEEEecCC-CccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 999999964 33333 35899999999997411 235889999999999998754
No 76
>KOG0274|consensus
Probab=99.94 E-value=6e-25 Score=278.15 Aligned_cols=279 Identities=21% Similarity=0.329 Sum_probs=235.3
Q ss_pred cccCccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCE
Q psy9598 442 VLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI 521 (1915)
Q Consensus 442 ~l~~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I 521 (1915)
+..+..++|+.++.+.+|+.. ....+...|.||.+.|++++|..-+.+|++|+.|.+++|||+.+|.+..++.||.+.|
T Consensus 216 ~~~~~~~~~s~~~tl~~~~~~-~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv 294 (537)
T KOG0274|consen 216 LHDGFFKSGSDDSTLHLWDLN-NGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSV 294 (537)
T ss_pred eecCeEEecCCCceeEEeecc-cceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceE
Confidence 345677889999999888643 3344444599999999999999888999999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccc
Q psy9598 522 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601 (1915)
Q Consensus 522 ~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~ 601 (1915)
.+|...+ .++++||.|.+|+||++.++.++.++.+|.++|.++.+.- .++++|+.||+|++||+.+++++..
T Consensus 295 ~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~------~~lvsgs~d~~v~VW~~~~~~cl~s 366 (537)
T KOG0274|consen 295 RCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDE------PLLVSGSYDGTVKVWDPRTGKCLKS 366 (537)
T ss_pred EEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEecC------CEEEEEecCceEEEEEhhhceeeee
Confidence 9998754 4789999999999999999999999999999999999973 8999999999999999997765444
Q ss_pred eeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE
Q psy9598 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 681 (1915)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg 681 (1915)
+ .+|...|+++.+... ..+++|+.|++|++||+.+.. .++..+.+|..-|.++.+ .+++|+++
T Consensus 367 l------------~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~--~c~~tl~~h~~~v~~l~~--~~~~Lvs~ 429 (537)
T KOG0274|consen 367 L------------SGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR--KCIHTLQGHTSLVSSLLL--RDNFLVSS 429 (537)
T ss_pred e------------cCCcceEEEEEecCc-ceEEeeeeccceEeecCCchh--hhhhhhcCCccccccccc--ccceeEec
Confidence 3 457899999988765 799999999999999994332 788889999999977765 56799999
Q ss_pred eCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee
Q psy9598 682 SRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK 761 (1915)
Q Consensus 682 s~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~ 761 (1915)
+.||+|++||...++++..... .+...|.++++. ...+++++. +|.+++||+.++.++..+-
T Consensus 430 ~aD~~Ik~WD~~~~~~~~~~~~---------------~~~~~v~~l~~~--~~~il~s~~-~~~~~l~dl~~~~~~~~l~ 491 (537)
T KOG0274|consen 430 SADGTIKLWDAEEGECLRTLEG---------------RHVGGVSALALG--KEEILCSSD-DGSVKLWDLRSGTLIRTLL 491 (537)
T ss_pred cccccEEEeecccCceeeeecc---------------CCcccEEEeecC--cceEEEEec-CCeeEEEecccCchhhhhh
Confidence 9999999999999987654311 145667777766 566777777 9999999999999988775
Q ss_pred CCC
Q psy9598 762 GHT 764 (1915)
Q Consensus 762 gH~ 764 (1915)
.+.
T Consensus 492 ~~~ 494 (537)
T KOG0274|consen 492 STD 494 (537)
T ss_pred hcc
Confidence 444
No 77
>KOG0275|consensus
Probab=99.94 E-value=5e-26 Score=249.47 Aligned_cols=285 Identities=20% Similarity=0.259 Sum_probs=238.3
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe--------ecCCCCeEEEEeccCccCCCcEEEEEeCCCe
Q psy9598 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL--------VGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l--------~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dgt 587 (1915)
|..+.+-|..|+|||++|++||.||.|-||+..+|+....+ .-+...|.|+.|+.+ ...|++|+.||.
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRD----sEMlAsGsqDGk 286 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRD----SEMLASGSQDGK 286 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeeccc----HHHhhccCcCCc
Confidence 45567889999999999999999999999999998865433 347789999999984 489999999999
Q ss_pred EEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCee
Q psy9598 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVD 667 (1915)
Q Consensus 588 I~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~ 667 (1915)
|++|.+.+|.++..+. ++|...|+|+.|+.|+..|++++.|.+|+|.-+ ..+.++..+.||++.|+
T Consensus 287 IKvWri~tG~ClRrFd-----------rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGl---KSGK~LKEfrGHsSyvn 352 (508)
T KOG0275|consen 287 IKVWRIETGQCLRRFD-----------RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGL---KSGKCLKEFRGHSSYVN 352 (508)
T ss_pred EEEEEEecchHHHHhh-----------hhhccCeeEEEEccCcchhhcccccceEEEecc---ccchhHHHhcCcccccc
Confidence 9999999998866543 246788999999999999999999999999987 56677888999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC-EEEEEEecCCeE
Q psy9598 668 SIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR-WVITAINFNFQI 746 (1915)
Q Consensus 668 sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~-~L~t~s~~Dg~I 746 (1915)
...|+++|.++++++.||+|+||+..+..|...+. ..+....|+++..-|.+. .++++.. .++|
T Consensus 353 ~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk--------------~~~~d~~vnsv~~~PKnpeh~iVCNr-sntv 417 (508)
T KOG0275|consen 353 EATFTDDGHHIISASSDGTVKVWHGKTTECLSTFK--------------PLGTDYPVNSVILLPKNPEHFIVCNR-SNTV 417 (508)
T ss_pred ceEEcCCCCeEEEecCCccEEEecCcchhhhhhcc--------------CCCCcccceeEEEcCCCCceEEEEcC-CCeE
Confidence 99999999999999999999999999888654321 112456677777777654 4444444 8899
Q ss_pred EEEECCCCceEEEeeC---CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEc
Q psy9598 747 KIWDAFNGDLVQVLKG---HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWS 823 (1915)
Q Consensus 747 ~vwD~~tg~~i~~l~g---H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafS 823 (1915)
+|.++ .|+.+.++.. ..+...+.+.+| .|.++.+.|.|+.++.|.+.+|.. ...+. .|...|..++.+
T Consensus 418 ~imn~-qGQvVrsfsSGkREgGdFi~~~lSp-kGewiYcigED~vlYCF~~~sG~L--E~tl~-----VhEkdvIGl~HH 488 (508)
T KOG0275|consen 418 YIMNM-QGQVVRSFSSGKREGGDFINAILSP-KGEWIYCIGEDGVLYCFSVLSGKL--ERTLP-----VHEKDVIGLTHH 488 (508)
T ss_pred EEEec-cceEEeeeccCCccCCceEEEEecC-CCcEEEEEccCcEEEEEEeecCce--eeeee-----cccccccccccC
Confidence 99998 5888888863 234566677899 999999999999999999999988 55554 455678889999
Q ss_pred CCCCEEEEEeCCCeEEEEe
Q psy9598 824 PDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 824 pdg~~Lasg~~dG~I~Iwd 842 (1915)
|..++||+-+.||.+.+|.
T Consensus 489 PHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 489 PHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cccchhhhhcccchhhhcC
Confidence 9999999999999999994
No 78
>KOG0305|consensus
Probab=99.94 E-value=5.4e-25 Score=267.70 Aligned_cols=278 Identities=20% Similarity=0.339 Sum_probs=238.8
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeec-CC
Q psy9598 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVG-HQ 560 (1915)
Q Consensus 482 vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~-h~ 560 (1915)
+.|+ ..+.||+|.. ..|.+|+..++........+...|+++.|+++|.+||+|..+|.|.|||..+.+.+..+.+ |.
T Consensus 183 ldWs-s~n~laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~ 260 (484)
T KOG0305|consen 183 LDWS-SANVLAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHA 260 (484)
T ss_pred hhcc-cCCeEEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcC
Confidence 5566 3556777754 4899999999987777666689999999999999999999999999999999999999998 99
Q ss_pred CCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCC
Q psy9598 561 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH 640 (1915)
Q Consensus 561 ~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg 640 (1915)
..|.+++|.. ..+.+|+.||.|.++|++....... .+.+|...|+.+.|++++.+||+|+.|+
T Consensus 261 ~rvg~laW~~------~~lssGsr~~~I~~~dvR~~~~~~~-----------~~~~H~qeVCgLkws~d~~~lASGgnDN 323 (484)
T KOG0305|consen 261 SRVGSLAWNS------SVLSSGSRDGKILNHDVRISQHVVS-----------TLQGHRQEVCGLKWSPDGNQLASGGNDN 323 (484)
T ss_pred ceeEEEeccC------ceEEEecCCCcEEEEEEecchhhhh-----------hhhcccceeeeeEECCCCCeeccCCCcc
Confidence 9999999985 7899999999999999987754322 2457889999999999999999999999
Q ss_pred eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCC-CCEEEEEe--CCCcEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 641 HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS-HLRFVSGS--RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 641 ~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspd-g~~L~sgs--~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
.+.|||. ........+..|...|.+++|+|- ..+||+|+ .|++|++||..++..+. .
T Consensus 324 ~~~Iwd~---~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~-----------------~ 383 (484)
T KOG0305|consen 324 VVFIWDG---LSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARID-----------------S 383 (484)
T ss_pred ceEeccC---CCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEec-----------------c
Confidence 9999998 445567778899999999999995 45778764 79999999999887443 1
Q ss_pred ccccccEEEEEECCCCCEEEEEE-ecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 718 TNKKIKVTMVAWDASDRWVITAI-NFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t~s-~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
......|++|.|++..+-|+++. ..++.|.||+..+...+..+.||...|..++++| ++..+++|+.|.++++|++-.
T Consensus 384 vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SP-dg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 384 VDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSP-DGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred cccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECC-CCCEEEEecccCcEEeccccC
Confidence 23567899999999986666543 3477899999999999999999999999999999 999999999999999999977
Q ss_pred Ccc
Q psy9598 797 SKQ 799 (1915)
Q Consensus 797 ~~~ 799 (1915)
...
T Consensus 463 ~~~ 465 (484)
T KOG0305|consen 463 ERP 465 (484)
T ss_pred CCC
Confidence 433
No 79
>KOG0640|consensus
Probab=99.94 E-value=1.8e-25 Score=244.87 Aligned_cols=295 Identities=16% Similarity=0.243 Sum_probs=235.1
Q ss_pred EEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC-----------------C-ceEEEeecCCCCeEEEEeccCcc
Q psy9598 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT-----------------L-APISVLVGHQGIITGVNFCPLEV 573 (1915)
Q Consensus 512 ~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t-----------------g-~~~~~l~~h~~~V~sl~fsp~~~ 573 (1915)
..+..|.+++.+.+|++||.++|+||.|..|+|.|+.. + -.+.+|..|...|+++.|+|..
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre- 184 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE- 184 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh-
Confidence 45677999999999999999999999999999999861 1 2467889999999999999955
Q ss_pred CCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCC
Q psy9598 574 NGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 653 (1915)
Q Consensus 574 ~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~ 653 (1915)
..|++|+.|++|++||+........+.. ......|.|++|+|.|.+|++|....++++||+.+....
T Consensus 185 ---~ILiS~srD~tvKlFDfsK~saKrA~K~----------~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcf 251 (430)
T KOG0640|consen 185 ---TILISGSRDNTVKLFDFSKTSAKRAFKV----------FQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCF 251 (430)
T ss_pred ---heEEeccCCCeEEEEecccHHHHHHHHH----------hhccceeeeEeecCCCceEEEecCCCceeEEeccceeEe
Confidence 8999999999999999875432111111 122367999999999999999999999999999543222
Q ss_pred ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCC
Q psy9598 654 LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733 (1915)
Q Consensus 654 ~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg 733 (1915)
.....-.+|++.|++|.+++.|++.++||.||.|+|||--++.|+.... .......|++..|..+|
T Consensus 252 vsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~--------------~AH~gsevcSa~Ftkn~ 317 (430)
T KOG0640|consen 252 VSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIG--------------NAHGGSEVCSAVFTKNG 317 (430)
T ss_pred eecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHH--------------hhcCCceeeeEEEccCC
Confidence 2222346799999999999999999999999999999987776554221 11245679999999999
Q ss_pred CEEEEEEecCCeEEEEECCCCceEEEeeCCC--C---CeEEEEEccCCCCEEEEEe-cCceEEEEECCCCccccceeeee
Q psy9598 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHT--N---EVFVLESHPFDSRVLLSAG-HDGLIIIWDILSSKQRGYKWFHN 807 (1915)
Q Consensus 734 ~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~--~---~V~sl~~sp~dg~~LaSgs-~DG~I~IWdl~s~~~~~~~~~~~ 807 (1915)
+||++++. |..+++|.+.++.++..+.|-. + .-+...|+. ...+++.-. ..+.++-||.+++.. +..
T Consensus 318 kyiLsSG~-DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNh-tEdyVl~pDEas~slcsWdaRtadr--~~l--- 390 (430)
T KOG0640|consen 318 KYILSSGK-DSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNH-TEDYVLFPDEASNSLCSWDARTADR--VAL--- 390 (430)
T ss_pred eEEeecCC-cceeeeeeecCCceEEEEecCCcccchhhhhhhhhcC-ccceEEccccccCceeeccccchhh--hhh---
Confidence 99999998 9999999999999999988642 1 123344665 555655544 467899999998876 322
Q ss_pred eecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9598 808 IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 808 ~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwd 842 (1915)
+...|++++..+.-||.+.-|++|+.|-.+++|-
T Consensus 391 -~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 391 -LSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred -cccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence 2346889999999999999999999999999994
No 80
>KOG0308|consensus
Probab=99.94 E-value=6.5e-26 Score=270.07 Aligned_cols=354 Identities=18% Similarity=0.217 Sum_probs=269.6
Q ss_pred CCCCcEE---EEEEc-CCCCEEEEEECCCcEEEEECCCCc------EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Q psy9598 474 GHLSAVF---CVLFD-KLGEVIVTGADDLLIKLWRARDGK------LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIR 543 (1915)
Q Consensus 474 gH~~~V~---~vafs-pdg~~LaTGs~Dg~I~IWd~~tg~------~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIr 543 (1915)
.|...|. ++..+ |.++||+|||.||.|++|++.... .+.++..|...|++|+...+++.|+|+|.|.+|+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK 98 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence 4555555 44444 577889999999999999975432 4778899999999999999999999999999999
Q ss_pred EEECCCC--ceEEEeecCCCCeEEEEe-ccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCc
Q psy9598 544 IWNLQTL--APISVLVGHQGIITGVNF-CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 620 (1915)
Q Consensus 544 VWDl~tg--~~~~~l~~h~~~V~sl~f-sp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1915)
+|+...+ -++.++..|.+.|.||++ .+ +..++|+||-|+.|.+||+.++.......+. .........++...
T Consensus 99 ~W~~~~~~~~c~stir~H~DYVkcla~~ak----~~~lvaSgGLD~~IflWDin~~~~~l~~s~n-~~t~~sl~sG~k~s 173 (735)
T KOG0308|consen 99 VWNAHKDNTFCMSTIRTHKDYVKCLAYIAK----NNELVASGGLDRKIFLWDINTGTATLVASFN-NVTVNSLGSGPKDS 173 (735)
T ss_pred EeecccCcchhHhhhhcccchheeeeeccc----CceeEEecCCCccEEEEEccCcchhhhhhcc-ccccccCCCCCccc
Confidence 9999877 678889999999999999 44 4589999999999999999988431111111 11111112267789
Q ss_pred eEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEe
Q psy9598 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFI 700 (1915)
Q Consensus 621 V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~ 700 (1915)
|++++.++.|..|++|+..+.|++||. .....+..+.||+..|.+|..+.+|..++++|.||+|++||+....|+..
T Consensus 174 iYSLA~N~t~t~ivsGgtek~lr~wDp---rt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T 250 (735)
T KOG0308|consen 174 IYSLAMNQTGTIIVSGGTEKDLRLWDP---RTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLAT 250 (735)
T ss_pred eeeeecCCcceEEEecCcccceEEecc---ccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeee
Confidence 999999999999999999999999998 45566778889999999999999999999999999999999998876653
Q ss_pred eecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEE
Q psy9598 701 RLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 780 (1915)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~L 780 (1915)
. ..|...|+++..+++-..+++|+. ||.|..-|+++......+.....+|..+..+- ..+-+
T Consensus 251 ~----------------~vH~e~VWaL~~~~sf~~vYsG~r-d~~i~~Tdl~n~~~~tlick~daPv~~l~~~~-~~~~~ 312 (735)
T KOG0308|consen 251 Y----------------IVHKEGVWALQSSPSFTHVYSGGR-DGNIYRTDLRNPAKSTLICKEDAPVLKLHLHE-HDNSV 312 (735)
T ss_pred E----------------EeccCceEEEeeCCCcceEEecCC-CCcEEecccCCchhheEeecCCCchhhhhhcc-ccCCc
Confidence 2 236677999999999999999999 99999999998544444444555677777665 22334
Q ss_pred EEEecCceEEEEECCCCccc---c--ce--------eee----eeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 781 LSAGHDGLIIIWDILSSKQR---G--YK--------WFH----NIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 781 aSgs~DG~I~IWdl~s~~~~---~--~~--------~~~----~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
-+++.|+.|.-|...-.... + .. .+. ......+..+|...+.-.|-+++++-+..|.+.+||+
T Consensus 313 WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDI 392 (735)
T KOG0308|consen 313 WVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDI 392 (735)
T ss_pred eeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEe
Confidence 67788999999976421110 0 00 000 0001122234555566668899999999999999999
Q ss_pred CCCcccccCC
Q psy9598 844 GGFKRPQNIP 853 (1915)
Q Consensus 844 ~s~~~~~~l~ 853 (1915)
-....+..+-
T Consensus 393 l~~~~~~d~g 402 (735)
T KOG0308|consen 393 LACVKVEDFG 402 (735)
T ss_pred eeeeehhhcc
Confidence 8766655443
No 81
>KOG0772|consensus
Probab=99.94 E-value=2.1e-25 Score=258.86 Aligned_cols=310 Identities=15% Similarity=0.225 Sum_probs=236.4
Q ss_pred CcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc----eEEEee-cCCCCeEEEEeccCccCCCcEEEEE
Q psy9598 508 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA----PISVLV-GHQGIITGVNFCPLEVNGFNYLAST 582 (1915)
Q Consensus 508 g~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~----~~~~l~-~h~~~V~sl~fsp~~~~d~~~L~sg 582 (1915)
+.+-..|.+|+..|++|++.|.|..|+|||.|.+|++||++... ....|. .....|.++.|++.+ ..|++.
T Consensus 157 ~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg----~~iLvv 232 (641)
T KOG0772|consen 157 GSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTG----DQILVV 232 (641)
T ss_pred ccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCC----CeEEEE
Confidence 44556788999999999999999999999999999999997532 122222 344578999999954 778888
Q ss_pred eCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEe--
Q psy9598 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEV-- 659 (1915)
Q Consensus 583 s~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l-- 659 (1915)
+....++|+|-..............+.-.....+|...++|.+|+|.. ..+++++.||+++||++........+...
T Consensus 233 sg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~ 312 (641)
T KOG0772|consen 233 SGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKP 312 (641)
T ss_pred ecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeecc
Confidence 888899999987665544444444444455667899999999999964 47889999999999999765544444432
Q ss_pred -ccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEE
Q psy9598 660 -EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738 (1915)
Q Consensus 660 -~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t 738 (1915)
.+..-.+++++|+++|.+|++|+.||.|.+|+......... ............|+||+||++|++|++
T Consensus 313 ~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~-----------~~vk~AH~~g~~Itsi~FS~dg~~LlS 381 (641)
T KOG0772|consen 313 AGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPV-----------MKVKDAHLPGQDITSISFSYDGNYLLS 381 (641)
T ss_pred CCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccc-----------eEeeeccCCCCceeEEEeccccchhhh
Confidence 23345789999999999999999999999999854321110 011111223348999999999999999
Q ss_pred EEecCCeEEEEECCCC-ceEEEeeCCC--CCeEEEEEccCCCCEEEEEec------CceEEEEECCCCccccceeeeeee
Q psy9598 739 AINFNFQIKIWDAFNG-DLVQVLKGHT--NEVFVLESHPFDSRVLLSAGH------DGLIIIWDILSSKQRGYKWFHNIV 809 (1915)
Q Consensus 739 ~s~~Dg~I~vwD~~tg-~~i~~l~gH~--~~V~sl~~sp~dg~~LaSgs~------DG~I~IWdl~s~~~~~~~~~~~~~ 809 (1915)
-+. |++++|||++.. +++.+..+-. -+-+.++|+| +..+|+||.. .|++++||..+... +..+.
T Consensus 382 Rg~-D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSP-d~kli~TGtS~~~~~~~g~L~f~d~~t~d~--v~ki~--- 454 (641)
T KOG0772|consen 382 RGF-DDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSP-DDKLILTGTSAPNGMTAGTLFFFDRMTLDT--VYKID--- 454 (641)
T ss_pred ccC-CCceeeeeccccccchhhhcCCCccCCCCccccCC-CceEEEecccccCCCCCceEEEEeccceee--EEEec---
Confidence 998 999999999874 5566655433 2457889999 8999999863 57899999887665 44433
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy9598 810 EGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 841 (1915)
Q Consensus 810 ~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iw 841 (1915)
.....|..|.|+|--+.|.+|+.||.++||
T Consensus 455 --i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 455 --ISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred --CCCceEEEEeecchhhheeeecCCCceEEE
Confidence 235679999999999999999999999887
No 82
>KOG0299|consensus
Probab=99.94 E-value=7.8e-25 Score=253.05 Aligned_cols=295 Identities=21% Similarity=0.319 Sum_probs=240.3
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE----EE---E-----------eCCCCCEEEEEEeCCCC
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL----AT---L-----------RGCSGEISDIAIDNRNI 531 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~----~~---l-----------~gH~~~I~~Lafspdg~ 531 (1915)
+.+..|.-+|+||+++|++.++++++.+|+|.-|++.+|+.. .+ + .+|...|.+++.++||+
T Consensus 136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 456789999999999999999999999999999999888633 11 0 27889999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccc
Q psy9598 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 611 (1915)
Q Consensus 532 ~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~ 611 (1915)
+||+|+.|..|.||+..+++.+.++.+|.+.|.+++|-- +...|+++|.|.+|++|++.... +.
T Consensus 216 ylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~----gt~~lys~s~Drsvkvw~~~~~s------------~v 279 (479)
T KOG0299|consen 216 YLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK----GTSELYSASADRSVKVWSIDQLS------------YV 279 (479)
T ss_pred EEEecCCCceEEEecCcccchhhcccccccceeeeeeec----CccceeeeecCCceEEEehhHhH------------HH
Confidence 999999999999999999999999999999999999986 44899999999999999987553 34
Q ss_pred cccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy9598 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 691 (1915)
Q Consensus 612 ~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWD 691 (1915)
..+.+|...|..+....-++.+-+|+.|+++++|++.. .....+.+|.+.+.|++|- +..+|++||.+|.|.+|+
T Consensus 280 etlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e----esqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs 354 (479)
T KOG0299|consen 280 ETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE----ESQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWS 354 (479)
T ss_pred HHHhCCccceeeechhcccceEEeccccceeEEEeccc----cceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEee
Confidence 55667889999999998899999999999999999932 1233467889999999997 456899999999999999
Q ss_pred ccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC----ceEEEeeCCCCCe
Q psy9598 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG----DLVQVLKGHTNEV 767 (1915)
Q Consensus 692 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg----~~i~~l~gH~~~V 767 (1915)
+.....+.+........+.. ....+..+|++|+..|...++++|+. +|.|++|-+..+ .++..+. -.+.|
T Consensus 355 ~~KKkplf~~~~AHgv~~~~----~~~~~~~Witsla~i~~sdL~asGS~-~G~vrLW~i~~g~r~i~~l~~ls-~~GfV 428 (479)
T KOG0299|consen 355 LLKKKPLFTSRLAHGVIPEL----DPVNGNFWITSLAVIPGSDLLASGSW-SGCVRLWKIEDGLRAINLLYSLS-LVGFV 428 (479)
T ss_pred ecccCceeEeeccccccCCc----cccccccceeeeEecccCceEEecCC-CCceEEEEecCCccccceeeecc-cccEE
Confidence 98887665543332222221 12234469999999999999999988 999999998876 4555554 56789
Q ss_pred EEEEEccCCCCEEEE-EecCceEEEE
Q psy9598 768 FVLESHPFDSRVLLS-AGHDGLIIIW 792 (1915)
Q Consensus 768 ~sl~~sp~dg~~LaS-gs~DG~I~IW 792 (1915)
++|+|++ +|..|++ .|....+--|
T Consensus 429 Nsl~f~~-sgk~ivagiGkEhRlGRW 453 (479)
T KOG0299|consen 429 NSLAFSN-SGKRIVAGIGKEHRLGRW 453 (479)
T ss_pred EEEEEcc-CCCEEEEeccccccccee
Confidence 9999999 7775554 4555554444
No 83
>cd05496 Bromo_WDR9_II Bromodomain; WDR9 repeat II_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional regulator involved in chromatin remodeling and play a role in embryonic development. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.94 E-value=1.2e-26 Score=234.42 Aligned_cols=111 Identities=50% Similarity=1.015 Sum_probs=105.9
Q ss_pred chhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcC
Q psy9598 115 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194 (1915)
Q Consensus 115 ~~~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~ 194 (1915)
...|++.|..||+.|++++.++||++|||...+||||+||++||||+||++||.+|.|.++++|.+||+|||.||++||+
T Consensus 3 ~~~w~~~c~~il~~l~~~~~s~~F~~PVd~~~~pdY~~iIk~PmDL~tIk~kL~~~~Y~~~~ef~~D~~lif~Na~~yN~ 82 (119)
T cd05496 3 ESDWKKQCKELVNLMWDCEDSEPFRQPVDLLKYPDYRDIIDTPMDLGTVKETLFGGNYDDPMEFAKDVRLIFSNSKSYTP 82 (119)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCChhhcCcHHHHhCCcccHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 35799999999999999999999999999989999999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy9598 195 NKRSKIYIMTTRLSEFAEEHLRRLTVRWNSH 225 (1915)
Q Consensus 195 ~~~s~i~~~a~~l~~~f~~~~~~~~~~~~~~ 225 (1915)
+++|.||.+|..|+++|+++++.+...|+..
T Consensus 83 ~~~s~i~~~a~~L~~~F~~~~~~l~~~~~~~ 113 (119)
T cd05496 83 NKRSRIYSMTLRLSALFEEHIKKIISDWKSA 113 (119)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6459999999999999999999999998743
No 84
>KOG0268|consensus
Probab=99.94 E-value=3.6e-26 Score=256.04 Aligned_cols=292 Identities=16% Similarity=0.255 Sum_probs=232.6
Q ss_pred EEEEEeCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeE
Q psy9598 510 LLATLRGCSGEISDIAIDNRN-ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg-~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI 588 (1915)
.+..|.||...|.||+=+|.. ..+|||+.||.|+|||+.+-.++.++.+|.+.|.+|++.. ..++++++|.+|
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~------~~~~tvgdDKtv 131 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ------TSFFTVGDDKTV 131 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc------cceEEecCCcce
Confidence 345678999999999999986 7899999999999999999999999999999999999976 678999999999
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeE
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDS 668 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~s 668 (1915)
+.|-+... .+.++ .+.+.+..+.-+..+..++|||. .|.|||.. ....+..+.-....|.+
T Consensus 132 K~wk~~~~-p~~ti-------------lg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~---R~~Pv~smswG~Dti~s 192 (433)
T KOG0268|consen 132 KQWKIDGP-PLHTI-------------LGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQ---RDNPVSSMSWGADSISS 192 (433)
T ss_pred eeeeccCC-cceee-------------eccccccccccccccccccccCc--eeeecccc---cCCccceeecCCCceeE
Confidence 99987763 11111 12355667777777778888876 58999983 23345556667788999
Q ss_pred EEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEE
Q psy9598 669 IQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIK 747 (1915)
Q Consensus 669 l~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~ 747 (1915)
+.|+|... .|++|+.|+.|.|||+++...+... .....-+.|+|+|.+ +.+++++.|..++
T Consensus 193 vkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KV-----------------i~~mRTN~IswnPea-fnF~~a~ED~nlY 254 (433)
T KOG0268|consen 193 VKFNPVETSILASCASDRSIVLYDLRQASPLKKV-----------------ILTMRTNTICWNPEA-FNFVAANEDHNLY 254 (433)
T ss_pred EecCCCcchheeeeccCCceEEEecccCCcccee-----------------eeeccccceecCccc-cceeeccccccce
Confidence 99999765 6677779999999999987743321 122344679999954 5455555599999
Q ss_pred EEECCC-CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCC
Q psy9598 748 IWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDG 826 (1915)
Q Consensus 748 vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg 826 (1915)
.||++. ..++.+..+|.+.|.+|.|+| .|.-|++||.|.+|+||.+..+.. ...++ ......|+++.||.|.
T Consensus 255 ~~DmR~l~~p~~v~~dhvsAV~dVdfsp-tG~EfvsgsyDksIRIf~~~~~~S--RdiYh----tkRMq~V~~Vk~S~Ds 327 (433)
T KOG0268|consen 255 TYDMRNLSRPLNVHKDHVSAVMDVDFSP-TGQEFVSGSYDKSIRIFPVNHGHS--RDIYH----TKRMQHVFCVKYSMDS 327 (433)
T ss_pred ehhhhhhcccchhhcccceeEEEeccCC-CcchhccccccceEEEeecCCCcc--hhhhh----HhhhheeeEEEEeccc
Confidence 999986 467888999999999999999 999999999999999999988776 22222 1234679999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCccccc
Q psy9598 827 TTCALTDSYGHLLVYGLGGFKRPQN 851 (1915)
Q Consensus 827 ~~Lasg~~dG~I~Iwdl~s~~~~~~ 851 (1915)
++|++|+.||.|++|--.-.+.+..
T Consensus 328 kyi~SGSdd~nvRlWka~Aseklgv 352 (433)
T KOG0268|consen 328 KYIISGSDDGNVRLWKAKASEKLGV 352 (433)
T ss_pred cEEEecCCCcceeeeecchhhhcCC
Confidence 9999999999999998766554443
No 85
>KOG0277|consensus
Probab=99.93 E-value=5.7e-25 Score=236.39 Aligned_cols=282 Identities=19% Similarity=0.350 Sum_probs=226.9
Q ss_pred EEEEEcCC-CCEEEEEE-------CCCcEEEEECCCCcEEEEEe--CCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECC
Q psy9598 480 FCVLFDKL-GEVIVTGA-------DDLLIKLWRARDGKLLATLR--GCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 480 ~~vafspd-g~~LaTGs-------~Dg~I~IWd~~tg~~~~~l~--gH~~~I~~Lafspd-g~~LaSgs~DgtIrVWDl~ 548 (1915)
+++.|||- .++||++. ..|.+.|.++..+.-+..+. .-...+..++|++. .+.+++++.||+++|||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 57888882 23333332 36899999987555444332 24678999999986 4578888999999999974
Q ss_pred C-CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEEC
Q psy9598 549 T-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 627 (1915)
Q Consensus 549 t-g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs 627 (1915)
- ..+++.++.|...|.++.|++. ....++++|.||+|++|+...+..+.+ +.+|..-|+...|+
T Consensus 92 ~~s~Pi~~~kEH~~EV~Svdwn~~---~r~~~ltsSWD~TiKLW~~~r~~Sv~T------------f~gh~~~Iy~a~~s 156 (311)
T KOG0277|consen 92 MPSKPIHKFKEHKREVYSVDWNTV---RRRIFLTSSWDGTIKLWDPNRPNSVQT------------FNGHNSCIYQAAFS 156 (311)
T ss_pred CCCcchhHHHhhhhheEEeccccc---cceeEEeeccCCceEeecCCCCcceEe------------ecCCccEEEEEecC
Confidence 3 4688999999999999999985 467888889999999999887765444 34577889999999
Q ss_pred C-CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEccCCceEEeeeccc
Q psy9598 628 P-GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH-SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705 (1915)
Q Consensus 628 p-dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp-dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~ 705 (1915)
| .++++++++.||++++||++... ....+..|...|.|+.|+. +...|+||+.|+.|++||++....
T Consensus 157 p~~~nlfas~Sgd~~l~lwdvr~~g---k~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~-------- 225 (311)
T KOG0277|consen 157 PHIPNLFASASGDGTLRLWDVRSPG---KFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT-------- 225 (311)
T ss_pred CCCCCeEEEccCCceEEEEEecCCC---ceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccc--------
Confidence 9 47899999999999999996442 2333788999999999986 456889999999999999987551
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC-CceEEEeeCCCCCeEEEEEccCCCCEEEEEe
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLSAG 784 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs 784 (1915)
......+|...|..|.|||...-|+++++.|-+++|||... ..++.+...|+.-|..+.|++.++.++|++|
T Consensus 226 -------pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 226 -------PLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred -------cceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecc
Confidence 12345678999999999998877666666699999999874 4567777889999999999999999999999
Q ss_pred cCceEEEEEC
Q psy9598 785 HDGLIIIWDI 794 (1915)
Q Consensus 785 ~DG~I~IWdl 794 (1915)
.|+.++||+-
T Consensus 299 WDe~l~Vw~p 308 (311)
T KOG0277|consen 299 WDELLYVWNP 308 (311)
T ss_pred cccceeeecc
Confidence 9999999984
No 86
>KOG0641|consensus
Probab=99.93 E-value=3.3e-23 Score=217.74 Aligned_cols=308 Identities=19% Similarity=0.249 Sum_probs=232.2
Q ss_pred CceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC------CCc---------EEEEEeCCCCCEEEEEEeC
Q psy9598 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR------DGK---------LLATLRGCSGEISDIAIDN 528 (1915)
Q Consensus 464 ~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~------tg~---------~~~~l~gH~~~I~~Lafsp 528 (1915)
.++..+.+| ..+..|.+|+|+|.|.+.|+|+...+.+|-... .+. +...-+.|.+.|.|.+|+|
T Consensus 21 ~~f~~i~~l-~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 21 KHFEAINIL-EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred cceEEEEEe-cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 445555444 567899999999999999999999998886432 111 2223357899999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceE-----EEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcccccee
Q psy9598 529 RNILLAAGTVDKTIRIWNLQTLAPI-----SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603 (1915)
Q Consensus 529 dg~~LaSgs~DgtIrVWDl~tg~~~-----~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~ 603 (1915)
+|.+|++|+.|.+|++.-++...+. ..+.-|.+.|..++|.......
T Consensus 100 ~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~---------------------------- 151 (350)
T KOG0641|consen 100 CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESG---------------------------- 151 (350)
T ss_pred ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcC----------------------------
Confidence 9999999999999999876543221 2344566666666665432212
Q ss_pred ccCccccccccCCCCCceEEEEECCCCcEEEEEe-CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEe
Q psy9598 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS-GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 682 (1915)
Q Consensus 604 ~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs 682 (1915)
|.+|++++ .|..|++-|. .....+..+.+|++.|.++ ++-+|-+|++|+
T Consensus 152 --------------------------~~il~s~gagdc~iy~tdc---~~g~~~~a~sghtghilal-yswn~~m~~sgs 201 (350)
T KOG0641|consen 152 --------------------------GAILASAGAGDCKIYITDC---GRGQGFHALSGHTGHILAL-YSWNGAMFASGS 201 (350)
T ss_pred --------------------------ceEEEecCCCcceEEEeec---CCCCcceeecCCcccEEEE-EEecCcEEEccC
Confidence 22333332 3445555554 3445566778899999887 455788999999
Q ss_pred CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC
Q psy9598 683 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g 762 (1915)
.|.+|++||++-..++...-... ....-....|.+++..|.|++|++|-. |....+||++.+..++.+..
T Consensus 202 qdktirfwdlrv~~~v~~l~~~~---------~~~glessavaav~vdpsgrll~sg~~-dssc~lydirg~r~iq~f~p 271 (350)
T KOG0641|consen 202 QDKTIRFWDLRVNSCVNTLDNDF---------HDGGLESSAVAAVAVDPSGRLLASGHA-DSSCMLYDIRGGRMIQRFHP 271 (350)
T ss_pred CCceEEEEeeeccceeeeccCcc---------cCCCcccceeEEEEECCCcceeeeccC-CCceEEEEeeCCceeeeeCC
Confidence 99999999999877655321100 001113467999999999999999988 99999999999999999999
Q ss_pred CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9598 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 763 H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwd 842 (1915)
|...|.++.|+| ...+|+||+.|..|++-|+...- ...+..++.+.|...+..+.|+|..-.|++.+.|.++.+|.
T Consensus 272 hsadir~vrfsp-~a~yllt~syd~~ikltdlqgdl---a~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa 347 (350)
T KOG0641|consen 272 HSADIRCVRFSP-GAHYLLTCSYDMKIKLTDLQGDL---AHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWA 347 (350)
T ss_pred CccceeEEEeCC-CceEEEEecccceEEEeecccch---hhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEec
Confidence 999999999999 88999999999999999996532 23344445567788888999999999999999999999998
Q ss_pred CC
Q psy9598 843 LG 844 (1915)
Q Consensus 843 l~ 844 (1915)
+.
T Consensus 348 ~~ 349 (350)
T KOG0641|consen 348 LN 349 (350)
T ss_pred cC
Confidence 74
No 87
>KOG2106|consensus
Probab=99.93 E-value=3e-23 Score=240.58 Aligned_cols=377 Identities=17% Similarity=0.243 Sum_probs=281.1
Q ss_pred eEEecCCCCcEEEEEEcCCCCEEEEEECCC--------cEEEEECCCCcEEEEEeCCCCCEEEEEEeCC--CCEEEEE--
Q psy9598 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDL--------LIKLWRARDGKLLATLRGCSGEISDIAIDNR--NILLAAG-- 536 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspdg~~LaTGs~Dg--------~I~IWd~~tg~~~~~l~gH~~~I~~Lafspd--g~~LaSg-- 536 (1915)
.+...||+..|-|++.+|+.-.+++|-.-| .|+|||..+...++.+......|+|++|++- |.+|+.-
T Consensus 97 Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~ 176 (626)
T KOG2106|consen 97 QRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDD 176 (626)
T ss_pred cccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecC
Confidence 346779999999999999998999876555 4999999888888888888889999999873 5565554
Q ss_pred eCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCC
Q psy9598 537 TVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 537 s~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
+.+..+.|||.+.+............|....|+|.. .++++++ ..|.+.+|+++++........- + ..
T Consensus 177 s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd---~nliit~-Gk~H~~Fw~~~~~~l~k~~~~f------e--k~ 244 (626)
T KOG2106|consen 177 SNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTD---PNLIITC-GKGHLYFWTLRGGSLVKRQGIF------E--KR 244 (626)
T ss_pred CCccccchhhchhhhccCcceeccceEEEEEeccCC---CcEEEEe-CCceEEEEEccCCceEEEeecc------c--cc
Confidence 456789999999888887777778889999999964 3555554 4688999999887543332211 0 01
Q ss_pred CCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy9598 617 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQ 696 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~ 696 (1915)
....|.|++|.++|. +++|.++|.|.||+..+ .........|.+.|.+++...+|. |++|+.|..|..||-.-..
T Consensus 245 ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~---~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDRki~~Wd~~y~k 319 (626)
T KOG2106|consen 245 EKKFVLCVTFLENGD-VITGDSGGNILIWSKGT---NRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDRKIILWDDNYRK 319 (626)
T ss_pred cceEEEEEEEcCCCC-EEeecCCceEEEEeCCC---ceEEeEeeecCCceEEEEEecCcc-EeecCccceEEeccccccc
Confidence 226799999999996 88999999999999833 233333449999999999999996 4559999999999832221
Q ss_pred eEEeeecc------------cc---------cCC---CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 697 WRFIRLDM------------NT---------CLP---HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 697 ~~~~~~~~------------~~---------~~~---~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
...+.+.. .. .+. .........+|....+.++.+|+...+++++. |+.+++|+
T Consensus 320 ~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gq-dk~v~lW~-- 396 (626)
T KOG2106|consen 320 LRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQ-DKHVRLWN-- 396 (626)
T ss_pred cccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccC-cceEEEcc--
Confidence 11110000 00 000 00111223456678889999999999999999 99999999
Q ss_pred CCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEE
Q psy9598 753 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALT 832 (1915)
Q Consensus 753 tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg 832 (1915)
..+++.+.. -..++.++.|+| .+ .||.|...|...|.|..+... ..++ ....++.+++|+|+|.+||+|
T Consensus 397 ~~k~~wt~~-~~d~~~~~~fhp-sg-~va~Gt~~G~w~V~d~e~~~l---v~~~-----~d~~~ls~v~ysp~G~~lAvg 465 (626)
T KOG2106|consen 397 DHKLEWTKI-IEDPAECADFHP-SG-VVAVGTATGRWFVLDTETQDL---VTIH-----TDNEQLSVVRYSPDGAFLAVG 465 (626)
T ss_pred CCceeEEEE-ecCceeEeeccC-cc-eEEEeeccceEEEEeccccee---EEEE-----ecCCceEEEEEcCCCCEEEEe
Confidence 444444433 345788999999 66 999999999999999988544 2232 126789999999999999999
Q ss_pred eCCCeEEEEeCCCCccc--------ccCCCceeecCCCCeeeecCCCc-ccee
Q psy9598 833 DSYGHLLVYGLGGFKRP--------QNIPRELFFHTDYRTLNRPNGLF-EPTY 876 (1915)
Q Consensus 833 ~~dG~I~Iwdl~s~~~~--------~~l~~~~~F~~d~~~Lv~~~~~~-~~v~ 876 (1915)
+.|++|+||.++..... .....++-|+.|+..++..++.| +-.|
T Consensus 466 s~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 466 SHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred cCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEE
Confidence 99999999999854332 22234788999999999888877 4445
No 88
>KOG1446|consensus
Probab=99.93 E-value=3.2e-23 Score=231.35 Aligned_cols=294 Identities=17% Similarity=0.218 Sum_probs=236.9
Q ss_pred cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC--CC
Q psy9598 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST--DG 586 (1915)
Q Consensus 509 ~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~--Dg 586 (1915)
+..+.|....+.|++|.|+.+|.+|++++.|.+|+|||..+|..+.++..+.-.|..++|.... ..++.++. |.
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~----~~~i~sStk~d~ 80 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHS----NTVIHSSTKEDD 80 (311)
T ss_pred ccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCC----ceEEEccCCCCC
Confidence 4445566667899999999999999999999999999999999999999888888899997643 56666665 88
Q ss_pred eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCe
Q psy9598 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKV 666 (1915)
Q Consensus 587 tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V 666 (1915)
+|+..++.+.+. ...+.+|...|++++.+|-+..+++++.|++|++||++... +...+ +...-
T Consensus 81 tIryLsl~dNky------------lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~---cqg~l--~~~~~ 143 (311)
T KOG1446|consen 81 TIRYLSLHDNKY------------LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK---CQGLL--NLSGR 143 (311)
T ss_pred ceEEEEeecCce------------EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC---CceEE--ecCCC
Confidence 999999887643 34456788999999999999999999999999999995322 22222 22333
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeE
Q psy9598 667 DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQI 746 (1915)
Q Consensus 667 ~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I 746 (1915)
..++|.|.|.+||++...+.|+|||++....-.. . ............+.+.|||+|++|+.+.. .+.+
T Consensus 144 pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF----------~-tf~i~~~~~~ew~~l~FS~dGK~iLlsT~-~s~~ 211 (311)
T KOG1446|consen 144 PIAAFDPEGLIFALANGSELIKLYDLRSFDKGPF----------T-TFSITDNDEAEWTDLEFSPDGKSILLSTN-ASFI 211 (311)
T ss_pred cceeECCCCcEEEEecCCCeEEEEEecccCCCCc----------e-eEccCCCCccceeeeEEcCCCCEEEEEeC-CCcE
Confidence 4578999999999999888999999986531110 0 00111145677899999999999999998 9999
Q ss_pred EEEECCCCceEEEeeCCCCCe---EEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEc
Q psy9598 747 KIWDAFNGDLVQVLKGHTNEV---FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWS 823 (1915)
Q Consensus 747 ~vwD~~tg~~i~~l~gH~~~V---~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafS 823 (1915)
++.|..+|..+.++.++...- ...+|+| ++.++++|+.||+|.+|++.++.. +..+. +.+.+++.++.|+
T Consensus 212 ~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftP-ds~Fvl~gs~dg~i~vw~~~tg~~--v~~~~----~~~~~~~~~~~fn 284 (311)
T KOG1446|consen 212 YLLDAFDGTVKSTFSGYPNAGNLPLSATFTP-DSKFVLSGSDDGTIHVWNLETGKK--VAVLR----GPNGGPVSCVRFN 284 (311)
T ss_pred EEEEccCCcEeeeEeeccCCCCcceeEEECC-CCcEEEEecCCCcEEEEEcCCCcE--eeEec----CCCCCCccccccC
Confidence 999999999999999886533 5677999 999999999999999999999988 66555 3356889999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCC
Q psy9598 824 PDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 824 pdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
|...++|++++ .+.+|-..
T Consensus 285 P~~~mf~sa~s--~l~fw~p~ 303 (311)
T KOG1446|consen 285 PRYAMFVSASS--NLVFWLPD 303 (311)
T ss_pred CceeeeeecCc--eEEEEecc
Confidence 98888888877 68888554
No 89
>KOG0647|consensus
Probab=99.93 E-value=2.6e-24 Score=236.82 Aligned_cols=283 Identities=14% Similarity=0.277 Sum_probs=221.1
Q ss_pred CCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCC-CcEE-EEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q psy9598 474 GHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARD-GKLL-ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 550 (1915)
Q Consensus 474 gH~~~V~~vafsp-dg~~LaTGs~Dg~I~IWd~~t-g~~~-~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg 550 (1915)
.-.++|.+|+||| ...+|++||.||+|++|++.. |..+ .....|.++|.+++|+.||..+++|+.|+.+++||+.++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 4568999999999 566777999999999999976 4433 344579999999999999999999999999999999999
Q ss_pred ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCC
Q psy9598 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 630 (1915)
Q Consensus 551 ~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg 630 (1915)
.+..+..|.++|.++.|.+.. ....|++||.|.+|++||.+....+.++.+. ..++++..- .
T Consensus 105 -Q~~~v~~Hd~pvkt~~wv~~~--~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP-------------eRvYa~Dv~--~ 166 (347)
T KOG0647|consen 105 -QVSQVAAHDAPVKTCHWVPGM--NYQCLVTGSWDKTLKFWDTRSSNPVATLQLP-------------ERVYAADVL--Y 166 (347)
T ss_pred -CeeeeeecccceeEEEEecCC--CcceeEecccccceeecccCCCCeeeeeecc-------------ceeeehhcc--C
Confidence 466677899999999998844 3568999999999999999988766666554 556666553 3
Q ss_pred cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceE-EeeecccccCC
Q psy9598 631 LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR-FIRLDMNTCLP 709 (1915)
Q Consensus 631 ~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~-~~~~~~~~~~~ 709 (1915)
.+++++..+..|.+|++.+........ .....-.+.||+...+...++.|+..|.+-|..+..+... .....+
T Consensus 167 pm~vVata~r~i~vynL~n~~te~k~~-~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkC----- 240 (347)
T KOG0647|consen 167 PMAVVATAERHIAVYNLENPPTEFKRI-ESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKC----- 240 (347)
T ss_pred ceeEEEecCCcEEEEEcCCCcchhhhh-cCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEE-----
Confidence 478889999999999995433222111 1123446889999999988999999999999988765211 000000
Q ss_pred CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEE
Q psy9598 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783 (1915)
Q Consensus 710 ~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSg 783 (1915)
+.........-..|++|+|+|....|+++|+ ||++.+||-.....+.+...|..+|++.+|+. +|.++|-+
T Consensus 241 -HR~~~~~~~~VYaVNsi~FhP~hgtlvTaGs-DGtf~FWDkdar~kLk~s~~~~qpItcc~fn~-~G~ifaYA 311 (347)
T KOG0647|consen 241 -HRSTNSVNDDVYAVNSIAFHPVHGTLVTAGS-DGTFSFWDKDARTKLKTSETHPQPITCCSFNR-NGSIFAYA 311 (347)
T ss_pred -eccCCCCCCceEEecceEeecccceEEEecC-CceEEEecchhhhhhhccCcCCCccceeEecC-CCCEEEEE
Confidence 0000011113567899999999999999999 99999999988888888899999999999998 88877755
No 90
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=1.6e-23 Score=265.31 Aligned_cols=268 Identities=18% Similarity=0.224 Sum_probs=207.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE-------------EEEeCCCCCEEEEEEeC-CCCEEEEEeCCC
Q psy9598 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL-------------ATLRGCSGEISDIAIDN-RNILLAAGTVDK 540 (1915)
Q Consensus 475 H~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~-------------~~l~gH~~~I~~Lafsp-dg~~LaSgs~Dg 540 (1915)
|-..|.+..+++++..+++++.+..+..|+...+..+ ..+.||.+.|++|+|+| ++.+||+|+.|+
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 3455666667777777777777777777775444322 14679999999999999 889999999999
Q ss_pred cEEEEECCCC-------ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccc
Q psy9598 541 TIRIWNLQTL-------APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNER 613 (1915)
Q Consensus 541 tIrVWDl~tg-------~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~ 613 (1915)
+|+|||+.++ .++..+.+|...|.+|+|+|.. .++|++|+.|++|+|||+.++..+..
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~---~~iLaSgs~DgtVrIWDl~tg~~~~~------------ 163 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA---MNVLASAGADMVVNVWDVERGKAVEV------------ 163 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC---CCEEEEEeCCCEEEEEECCCCeEEEE------------
Confidence 9999999764 3577899999999999999943 47999999999999999987753222
Q ss_pred cCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCC-eeEEEEcCCCCEEEEEe----CCCcEE
Q psy9598 614 IRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK-VDSIQWSHSHLRFVSGS----RDGTAL 688 (1915)
Q Consensus 614 ~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~-V~sl~fspdg~~L~sgs----~DG~I~ 688 (1915)
+..|...|.+++|+|+|.+|++|+.||.|+|||++. ...+..+.+|.+. +..+.|.+++..|++++ .|+.|+
T Consensus 164 l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs---g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~Vk 240 (493)
T PTZ00421 164 IKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD---GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIM 240 (493)
T ss_pred EcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC---CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEE
Confidence 234667899999999999999999999999999953 3456677888765 44677898888877654 479999
Q ss_pred EEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC-CCCCe
Q psy9598 689 IWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG-HTNEV 767 (1915)
Q Consensus 689 IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g-H~~~V 767 (1915)
|||++......... .......+....|++++.+|++++..|+.|++||+.++.++..+.. +..++
T Consensus 241 lWDlr~~~~p~~~~--------------~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~ 306 (493)
T PTZ00421 241 LWDTRKMASPYSTV--------------DLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPH 306 (493)
T ss_pred EEeCCCCCCceeEe--------------ccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCC
Confidence 99998654211100 0112345666789999999998885599999999999988777653 45567
Q ss_pred EEEEEcc
Q psy9598 768 FVLESHP 774 (1915)
Q Consensus 768 ~sl~~sp 774 (1915)
.+++|.|
T Consensus 307 ~g~~~~p 313 (493)
T PTZ00421 307 KGLCMMP 313 (493)
T ss_pred cceEecc
Confidence 8888888
No 91
>KOG0310|consensus
Probab=99.93 E-value=2.2e-24 Score=251.36 Aligned_cols=285 Identities=18% Similarity=0.277 Sum_probs=238.4
Q ss_pred CCcEEEEEEcCCCCE-EEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEE
Q psy9598 476 LSAVFCVLFDKLGEV-IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS 554 (1915)
Q Consensus 476 ~~~V~~vafspdg~~-LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~ 554 (1915)
.++|.+++|+|...+ +|+.+ .-.|.||+..+.....++......|.+++|..||.+||+|...|.|+|+|+.+...+.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR 104 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILR 104 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHH
Confidence 389999999996544 33333 3479999999988888887788999999999999999999999999999987766788
Q ss_pred EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEE
Q psy9598 555 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFL 633 (1915)
Q Consensus 555 ~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~L 633 (1915)
.+.+|+.+|..+.|+|. ++..|++|+.|+.+++||+.+... ...+.+|...|.|.+|+|. +..+
T Consensus 105 ~~~ah~apv~~~~f~~~---d~t~l~s~sDd~v~k~~d~s~a~v------------~~~l~~htDYVR~g~~~~~~~hiv 169 (487)
T KOG0310|consen 105 QLYAHQAPVHVTKFSPQ---DNTMLVSGSDDKVVKYWDLSTAYV------------QAELSGHTDYVRCGDISPANDHIV 169 (487)
T ss_pred HHhhccCceeEEEeccc---CCeEEEecCCCceEEEEEcCCcEE------------EEEecCCcceeEeeccccCCCeEE
Confidence 89999999999999994 678999999999999999988742 1234578899999999996 4589
Q ss_pred EEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcc
Q psy9598 634 ATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE 713 (1915)
Q Consensus 634 asgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~ 713 (1915)
++||.||.|++||++... ..+.++ .|..+|.+|.|-|.|..|++++. ..|+|||+.++...
T Consensus 170 vtGsYDg~vrl~DtR~~~--~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~ql--------------- 230 (487)
T KOG0310|consen 170 VTGSYDGKVRLWDTRSLT--SRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQL--------------- 230 (487)
T ss_pred EecCCCceEEEEEeccCC--ceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCcee---------------
Confidence 999999999999996543 334443 68999999999999999998865 57999999866522
Q ss_pred ccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEE
Q psy9598 714 TSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793 (1915)
Q Consensus 714 ~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWd 793 (1915)
......|...|+|+++..++..|++++- |+.|+|||+.+.+.++.+. -.++|.+++.+| ++..++.|..+|.+.+=+
T Consensus 231 l~~~~~H~KtVTcL~l~s~~~rLlS~sL-D~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~-dd~t~viGmsnGlv~~rr 307 (487)
T KOG0310|consen 231 LTSMFNHNKTVTCLRLASDSTRLLSGSL-DRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSP-DDQTVVIGMSNGLVSIRR 307 (487)
T ss_pred hhhhhcccceEEEEEeecCCceEeeccc-ccceEEEEccceEEEEeee-cccceeeEEecC-CCceEEEecccceeeeeh
Confidence 1223348889999999999999999998 9999999999999999886 567899999999 889999999999988775
Q ss_pred CCCCc
Q psy9598 794 ILSSK 798 (1915)
Q Consensus 794 l~s~~ 798 (1915)
....+
T Consensus 308 ~~~k~ 312 (487)
T KOG0310|consen 308 REVKK 312 (487)
T ss_pred hhccc
Confidence 54433
No 92
>cd05496 Bromo_WDR9_II Bromodomain; WDR9 repeat II_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional regulator involved in chromatin remodeling and play a role in embryonic development. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.93 E-value=1.3e-25 Score=226.98 Aligned_cols=113 Identities=50% Similarity=0.993 Sum_probs=107.1
Q ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcC
Q psy9598 1530 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609 (1915)
Q Consensus 1530 ~~~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~ 1609 (1915)
...|+++|..||+.|++++.++||+.|||...+||||+||++||||+||++||.+|.|.++++|..||+|||.||+.||+
T Consensus 3 ~~~w~~~c~~il~~l~~~~~s~~F~~PVd~~~~pdY~~iIk~PmDL~tIk~kL~~~~Y~~~~ef~~D~~lif~Na~~yN~ 82 (119)
T cd05496 3 ESDWKKQCKELVNLMWDCEDSEPFRQPVDLLKYPDYRDIIDTPMDLGTVKETLFGGNYDDPMEFAKDVRLIFSNSKSYTP 82 (119)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCChhhcCcHHHHhCCcccHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy9598 1610 NKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKN 1642 (1915)
Q Consensus 1610 ~~~s~i~~~a~~l~~~f~~~~~~~~~~~~~~~~ 1642 (1915)
+++|.||.+|..|+++|++++.++...|+.++.
T Consensus 83 ~~~s~i~~~a~~L~~~F~~~~~~l~~~~~~~~~ 115 (119)
T cd05496 83 NKRSRIYSMTLRLSALFEEHIKKIISDWKSALK 115 (119)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 645999999999999999999999998875544
No 93
>KOG1063|consensus
Probab=99.92 E-value=7.1e-24 Score=254.56 Aligned_cols=381 Identities=21% Similarity=0.258 Sum_probs=287.9
Q ss_pred cccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCC---EEEEEECCCcEEEEECCCCc----------------
Q psy9598 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGE---VIVTGADDLLIKLWRARDGK---------------- 509 (1915)
Q Consensus 449 tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~---~LaTGs~Dg~I~IWd~~tg~---------------- 509 (1915)
.|+.+..+.+.......+.....|.||.+.|.+|+|...+. +||+||+|..|+||.+.-+.
T Consensus 164 ~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~ 243 (764)
T KOG1063|consen 164 CGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSN 243 (764)
T ss_pred ecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccC
Confidence 35666777776666678889999999999999999986554 89999999999999763221
Q ss_pred -----EE----------EEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce-------EEEeecCCCCeEEEE
Q psy9598 510 -----LL----------ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP-------ISVLVGHQGIITGVN 567 (1915)
Q Consensus 510 -----~~----------~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~-------~~~l~~h~~~V~sl~ 567 (1915)
.. ..+.||...|+++.|+|.+..|+|+|.|.++.||...+..- +..+.|..+..++..
T Consensus 244 ~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~l 323 (764)
T KOG1063|consen 244 LPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGL 323 (764)
T ss_pred CceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEE
Confidence 11 12249999999999999999999999999999998765321 222334556788999
Q ss_pred eccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEe
Q psy9598 568 FCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647 (1915)
Q Consensus 568 fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl 647 (1915)
|+|+ ++.+++-+..|..++|-....... .....+.+|...|..++|+|.|.+|++.|.|.+-+||--
T Consensus 324 w~~n----~~~ii~~g~~Gg~hlWkt~d~~~w---------~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~ 390 (764)
T KOG1063|consen 324 WSPN----SNVIIAHGRTGGFHLWKTKDKTFW---------TQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFAR 390 (764)
T ss_pred EcCC----CCEEEEecccCcEEEEeccCccce---------eeccccccccccceeeeecCCCCEEEEeccccceeeecc
Confidence 9994 488999999999999982222110 111234578899999999999999999999999999976
Q ss_pred cCC-CCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCc----------e------------EE-----
Q psy9598 648 DGV-DSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQ----------W------------RF----- 699 (1915)
Q Consensus 648 ~~~-~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~----------~------------~~----- 699 (1915)
-+. .....+...+-|...++|++|-+....|++|.....+|+|+....- + +.
T Consensus 391 wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLS 470 (764)
T KOG1063|consen 391 WGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLS 470 (764)
T ss_pred cccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhccccccccccccc
Confidence 311 1223333445688899999998877789999999999999754110 0 00
Q ss_pred ---eee-cccc----------c-------C------------CCCccccccccccccEEEEEECCCCCEEEEEEec----
Q psy9598 700 ---IRL-DMNT----------C-------L------------PHTKETSDETNKKIKVTMVAWDASDRWVITAINF---- 742 (1915)
Q Consensus 700 ---~~~-~~~~----------~-------~------------~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~---- 742 (1915)
... ...+ . + ...+......+|...|.+++.+|+|++|++++..
T Consensus 471 nKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~e 550 (764)
T KOG1063|consen 471 NKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKE 550 (764)
T ss_pred CCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCcc
Confidence 000 0000 0 0 0001122356788999999999999999998852
Q ss_pred CCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEE
Q psy9598 743 NFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW 822 (1915)
Q Consensus 743 Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vaf 822 (1915)
...|++|+..+...+..+.+|.-.|+.|+|+| |+++|+++|.|.++.+|....+.... ..|. ....|..-|+++.|
T Consensus 551 hAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSp-dg~~LLsvsRDRt~sl~~~~~~~~~e-~~fa--~~k~HtRIIWdcsW 626 (764)
T KOG1063|consen 551 HAVIRLWNTANWLQVQELEGHSLTVTRLAFSP-DGRYLLSVSRDRTVSLYEVQEDIKDE-FRFA--CLKAHTRIIWDCSW 626 (764)
T ss_pred ceEEEEEeccchhhhheecccceEEEEEEECC-CCcEEEEeecCceEEeeeeecccchh-hhhc--cccccceEEEEccc
Confidence 23699999999999999999999999999999 99999999999999999986544311 1122 12356678999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCC
Q psy9598 823 SPDGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 823 Spdg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
+|++.+||+++.|..|.||.....
T Consensus 627 ~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 627 SPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred CcccceeEEecCCceEEEEeccCc
Confidence 999999999999999999999877
No 94
>KOG0277|consensus
Probab=99.92 E-value=3.6e-24 Score=230.28 Aligned_cols=283 Identities=17% Similarity=0.197 Sum_probs=222.3
Q ss_pred EEEEEeC--CCCEEEEE------eCCCcEEEEECCCCceEEEee--cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEE
Q psy9598 522 SDIAIDN--RNILLAAG------TVDKTIRIWNLQTLAPISVLV--GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591 (1915)
Q Consensus 522 ~~Lafsp--dg~~LaSg------s~DgtIrVWDl~tg~~~~~l~--~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iW 591 (1915)
.++.||| .+++.+++ ...|.+.|.++..+.-+..+. .-.+.+..++|++.. .+.+++++.||++++|
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~---e~~~~~a~GDGSLrl~ 88 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENH---ENQVIAASGDGSLRLF 88 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCC---cceEEEEecCceEEEe
Confidence 5788888 34333322 136899999997554444443 345789999999954 5899999999999999
Q ss_pred ecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEE
Q psy9598 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQ 670 (1915)
Q Consensus 592 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~ 670 (1915)
|+.... .....+..|...|.++.|++. +..+++++.||+|++|+. ..+..+.++.+|...|...+
T Consensus 89 d~~~~s-----------~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~---~r~~Sv~Tf~gh~~~Iy~a~ 154 (311)
T KOG0277|consen 89 DLTMPS-----------KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDP---NRPNSVQTFNGHNSCIYQAA 154 (311)
T ss_pred ccCCCC-----------cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecC---CCCcceEeecCCccEEEEEe
Confidence 954332 122345567899999999984 567888899999999998 45667888999999999999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEE
Q psy9598 671 WSHS-HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIW 749 (1915)
Q Consensus 671 fspd-g~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vw 749 (1915)
|+|. .+.|+++|.||++++||++...... ....|...|.++.|+.-...++++++.|+.|++|
T Consensus 155 ~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~----------------~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~w 218 (311)
T KOG0277|consen 155 FSPHIPNLFASASGDGTLRLWDVRSPGKFM----------------SIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGW 218 (311)
T ss_pred cCCCCCCeEEEccCCceEEEEEecCCCcee----------------EEEeccceeEeecccccCCcEEEecCCCceEEEE
Confidence 9985 6799999999999999987543111 1334778999999998766655555559999999
Q ss_pred ECCCC-ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC-CCC
Q psy9598 750 DAFNG-DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP-DGT 827 (1915)
Q Consensus 750 D~~tg-~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp-dg~ 827 (1915)
|+++. .++..+.+|.-.|..|.|+|....+|+|++.|-+++|||...+... +.++. +|..-|..+.||+ ++.
T Consensus 219 Dir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~-~e~~~-----~HtEFv~g~Dws~~~~~ 292 (311)
T KOG0277|consen 219 DIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSA-IETVD-----HHTEFVCGLDWSLFDPG 292 (311)
T ss_pred ehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhh-hhhhh-----ccceEEeccccccccCc
Confidence 99874 5788999999999999999988899999999999999999754431 22332 5667889999998 788
Q ss_pred EEEEEeCCCeEEEEeC
Q psy9598 828 TCALTDSYGHLLVYGL 843 (1915)
Q Consensus 828 ~Lasg~~dG~I~Iwdl 843 (1915)
++|+++.|+.++||+-
T Consensus 293 ~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 293 QVASTGWDELLYVWNP 308 (311)
T ss_pred eeeecccccceeeecc
Confidence 9999999999999984
No 95
>KOG0283|consensus
Probab=99.92 E-value=9.5e-24 Score=261.65 Aligned_cols=304 Identities=18% Similarity=0.200 Sum_probs=211.1
Q ss_pred EEEEe-CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEE
Q psy9598 511 LATLR-GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 511 ~~~l~-gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~ 589 (1915)
.+.+. .|.+.|.+|.||+||+|||+||.|+.|+||.+..... +..+.+.-.++.+.-.. .+....+.+..+.+.
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~---~~~~~~~~~~~~~~~~~--~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESER---MRVAEGDSSCMYFEYNA--NSQIEPSTSSEEKIS 333 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccch---hcccccccchhhhhhhh--ccccCcccccccccc
Confidence 34455 8999999999999999999999999999999865332 11112221222211100 000111111110000
Q ss_pred E--EecccCccccc-----eeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccC
Q psy9598 590 F--WKYKLDIDISK-----TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH 662 (1915)
Q Consensus 590 i--WDl~~~~~~~~-----~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h 662 (1915)
- -..+.+..... ..+.-.......+.+|.+.|..++||.++ +|++++.|.+|+||++. ...++..+ .|
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~---~~~CL~~F-~H 408 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPG---RKECLKVF-SH 408 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCC---CcceeeEE-ec
Confidence 0 00011110001 01111112234567899999999999876 89999999999999993 33444443 69
Q ss_pred CCCeeEEEEcC-CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe
Q psy9598 663 SDKVDSIQWSH-SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 741 (1915)
Q Consensus 663 ~~~V~sl~fsp-dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~ 741 (1915)
.+.|+||+|+| |.++|++||.||.|+||++...+.... ......|+++||.|+|.+.++|+-
T Consensus 409 ndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W-----------------~Dl~~lITAvcy~PdGk~avIGt~ 471 (712)
T KOG0283|consen 409 NDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDW-----------------NDLRDLITAVCYSPDGKGAVIGTF 471 (712)
T ss_pred CCeeEEEEecccCCCcEeecccccceEEeecCcCeeEee-----------------hhhhhhheeEEeccCCceEEEEEe
Confidence 99999999999 567999999999999999987764432 223467999999999999999998
Q ss_pred cCCeEEEEECCCCceEEEeeC--C------CCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCC
Q psy9598 742 FNFQIKIWDAFNGDLVQVLKG--H------TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQG 813 (1915)
Q Consensus 742 ~Dg~I~vwD~~tg~~i~~l~g--H------~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~ 813 (1915)
+|.+++|+....+++..+.. | ...|+++.|.|.+...|++.+.|..|+|+|.....+ +..|..+. .
T Consensus 472 -~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~l--v~KfKG~~---n 545 (712)
T KOG0283|consen 472 -NGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDL--VHKFKGFR---N 545 (712)
T ss_pred -ccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhh--hhhhcccc---c
Confidence 99999999988777665532 1 127999999997777788889999999999977766 55554211 1
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy9598 814 EGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFK 847 (1915)
Q Consensus 814 ~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~ 847 (1915)
.+.-....|+.||++|++++.|..|+||++....
T Consensus 546 ~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~~ 579 (712)
T KOG0283|consen 546 TSSQISASFSSDGKHIVSASEDSWVYIWKNDSFN 579 (712)
T ss_pred CCcceeeeEccCCCEEEEeecCceEEEEeCCCCc
Confidence 1234567899999999999999999999986543
No 96
>KOG2096|consensus
Probab=99.92 E-value=1.3e-23 Score=231.56 Aligned_cols=299 Identities=17% Similarity=0.182 Sum_probs=218.4
Q ss_pred eEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE--E--EeCCCCCEEEEEEeCCCCEE-EEEeCCCcEE
Q psy9598 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA--T--LRGCSGEISDIAIDNRNILL-AAGTVDKTIR 543 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~--~--l~gH~~~I~~Lafspdg~~L-aSgs~DgtIr 543 (1915)
...|.||.+.|+|++|+.||++|||++.|++|+||++.+..... . ..-.-+.-+.+.|.||-+-+ +++-...+++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 34788999999999999999999999999999999998753211 0 11112346789999997644 4455566899
Q ss_pred EEECCC---CceEEE---------eecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccc
Q psy9598 544 IWNLQT---LAPISV---------LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 611 (1915)
Q Consensus 544 VWDl~t---g~~~~~---------l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~ 611 (1915)
+|.+.. |...+. -.-|...|..+.... ++.+|++++.|..|.+|++. |+.+..+...
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~----~~k~imsas~dt~i~lw~lk-Gq~L~~idtn------ 227 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG----NAKYIMSASLDTKICLWDLK-GQLLQSIDTN------ 227 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecC----CceEEEEecCCCcEEEEecC-Cceeeeeccc------
Confidence 998742 222111 123555666666554 56899999999999999998 5554444332
Q ss_pred cccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecC-----CCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCc
Q psy9598 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-----VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT 686 (1915)
Q Consensus 612 ~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~-----~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~ 686 (1915)
...-+.+++||+|++|++++.---|+||.+-- ......++.+.||...|..++|+++...+++.|.||+
T Consensus 228 ------q~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~ 301 (420)
T KOG2096|consen 228 ------QSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGK 301 (420)
T ss_pred ------cccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCc
Confidence 23346688999999999999999999998731 1234567789999999999999999999999999999
Q ss_pred EEEEEccCCceEEeeeccccc-CCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-CCC
Q psy9598 687 ALIWYYKCSQWRFIRLDMNTC-LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-GHT 764 (1915)
Q Consensus 687 I~IWDl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-gH~ 764 (1915)
++|||+.-.- ....... +.... .......+.-..+.++|.|..|+++. ...|++|...+|+..-.+. .|.
T Consensus 302 wriwdtdVrY----~~~qDpk~Lk~g~--~pl~aag~~p~RL~lsP~g~~lA~s~--gs~l~~~~se~g~~~~~~e~~h~ 373 (420)
T KOG2096|consen 302 WRIWDTDVRY----EAGQDPKILKEGS--APLHAAGSEPVRLELSPSGDSLAVSF--GSDLKVFASEDGKDYPELEDIHS 373 (420)
T ss_pred EEEeeccceE----ecCCCchHhhcCC--cchhhcCCCceEEEeCCCCcEEEeec--CCceEEEEcccCccchhHHHhhc
Confidence 9999975321 0000000 00000 11112233334899999999998876 4689999999998877775 799
Q ss_pred CCeEEEEEccCCCCEEEEEecCceEEEEEC
Q psy9598 765 NEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 765 ~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
..|.+|+|++ +|++++|+| |..++++.-
T Consensus 374 ~~Is~is~~~-~g~~~atcG-dr~vrv~~n 401 (420)
T KOG2096|consen 374 TTISSISYSS-DGKYIATCG-DRYVRVIRN 401 (420)
T ss_pred CceeeEEecC-CCcEEeeec-ceeeeeecC
Confidence 9999999999 999999998 667777653
No 97
>KOG0301|consensus
Probab=99.92 E-value=1.3e-23 Score=252.74 Aligned_cols=284 Identities=21% Similarity=0.317 Sum_probs=238.3
Q ss_pred ceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE--EEEeCCCCCEEE-EEEeC-CCCEEEEEeCCC
Q psy9598 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL--ATLRGCSGEISD-IAIDN-RNILLAAGTVDK 540 (1915)
Q Consensus 465 ~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~--~~l~gH~~~I~~-Lafsp-dg~~LaSgs~Dg 540 (1915)
.+++.+.+.||..-|..|++.+ +..+++||.||+++||+-...+.+ +.+.+|.+.|.+ +++-+ ++-.|++|+.|+
T Consensus 3 ~Y~ls~~l~gH~~DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~ 81 (745)
T KOG0301|consen 3 QYKLSHELEGHKSDVRAVAVTD-GVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT 81 (745)
T ss_pred cceeEEEeccCccchheeEecC-CeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccc
Confidence 4567789999999998888775 448999999999999997665544 457788888887 88875 555799999999
Q ss_pred cEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCc
Q psy9598 541 TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 620 (1915)
Q Consensus 541 tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1915)
+|.+|.+.+..++.+|.+|...|.|+..... ..+++||.|.++++|-.... ...+.+|...
T Consensus 82 ~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~-----~~~iSgSWD~TakvW~~~~l--------------~~~l~gH~as 142 (745)
T KOG0301|consen 82 TIIVFKLSQAEPLYTLKGHKSNVCSLSIGED-----GTLISGSWDSTAKVWRIGEL--------------VYSLQGHTAS 142 (745)
T ss_pred eEEEEecCCCCchhhhhccccceeeeecCCc-----CceEecccccceEEecchhh--------------hcccCCcchh
Confidence 9999999999999999999999999987653 34999999999999975432 1225688999
Q ss_pred eEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEe
Q psy9598 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFI 700 (1915)
Q Consensus 621 V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~ 700 (1915)
|+++.+-|.+ .+++|+.|.+|++|.- ...+.++.+|++.|.++++-+++ .|+||+.||.|++|++ ++.++.
T Consensus 143 VWAv~~l~e~-~~vTgsaDKtIklWk~-----~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~- 213 (745)
T KOG0301|consen 143 VWAVASLPEN-TYVTGSADKTIKLWKG-----GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLL- 213 (745)
T ss_pred eeeeeecCCC-cEEeccCcceeeeccC-----CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceee-
Confidence 9999999988 8999999999999975 34567789999999999998765 6899999999999999 444332
Q ss_pred eecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEE
Q psy9598 701 RLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 780 (1915)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~L 780 (1915)
...+|..-|.+++...++..|++++. |++++||+.. .+.+.+.-....|+++.+-+ +|. |
T Consensus 214 ---------------~~~ghtn~vYsis~~~~~~~Ivs~gE-DrtlriW~~~--e~~q~I~lPttsiWsa~~L~-NgD-I 273 (745)
T KOG0301|consen 214 ---------------EMHGHTNFVYSISMALSDGLIVSTGE-DRTLRIWKKD--ECVQVITLPTTSIWSAKVLL-NGD-I 273 (745)
T ss_pred ---------------eeeccceEEEEEEecCCCCeEEEecC-CceEEEeecC--ceEEEEecCccceEEEEEee-CCC-E
Confidence 23468889999998888999999998 9999999975 88888886677899999887 665 7
Q ss_pred EEEecCceEEEEECCCC
Q psy9598 781 LSAGHDGLIIIWDILSS 797 (1915)
Q Consensus 781 aSgs~DG~I~IWdl~s~ 797 (1915)
++||.||.|+||.....
T Consensus 274 vvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 274 VVGGSDGRVRVFTVDKD 290 (745)
T ss_pred EEeccCceEEEEEeccc
Confidence 78999999999988743
No 98
>KOG0288|consensus
Probab=99.92 E-value=8e-25 Score=249.38 Aligned_cols=276 Identities=17% Similarity=0.277 Sum_probs=230.5
Q ss_pred chhhccc--CccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEe
Q psy9598 438 NTVNVLR--SREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 515 (1915)
Q Consensus 438 ~~v~~l~--~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~ 515 (1915)
+.+.++. +++.+|+.|+.+.+|.........+.+|.|..++|+++.|.+++.++++++.|+.+++|++..+++..+|.
T Consensus 179 ~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLs 258 (459)
T KOG0288|consen 179 HDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLS 258 (459)
T ss_pred ceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhc
Confidence 3444443 56789999999999998888888899999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEeccc
Q psy9598 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~ 595 (1915)
||++.|+++.|......+++|+.|.+|++||+....|..++.. ...+..|+.++ ..+++|-.|+.|++||+++
T Consensus 259 GHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~~------~~~~SgH~DkkvRfwD~Rs 331 (459)
T KOG0288|consen 259 GHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCSI------SDVISGHFDKKVRFWDIRS 331 (459)
T ss_pred ccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-cccccceEecc------eeeeecccccceEEEeccC
Confidence 9999999999988877799999999999999999888876643 34556666654 6889999999999999998
Q ss_pred CccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEecc--CCCCeeEEEEcC
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE--HSDKVDSIQWSH 673 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~--h~~~V~sl~fsp 673 (1915)
.........+ +.|+++..+++|..|.+++.|.++.++|+++...... +...+ -...++.++|||
T Consensus 332 ~~~~~sv~~g-------------g~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~-~sA~g~k~asDwtrvvfSp 397 (459)
T KOG0288|consen 332 ADKTRSVPLG-------------GRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQT-FSAEGFKCASDWTRVVFSP 397 (459)
T ss_pred CceeeEeecC-------------cceeeEeeccCCeEEeeecCCCceeeeecccccEEEE-eeccccccccccceeEECC
Confidence 8765554443 6899999999999999999999999999965432221 11111 123488899999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEE
Q psy9598 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIW 749 (1915)
Q Consensus 674 dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vw 749 (1915)
++.|+++||.||.|+||++.++++...... ......|++++|++.|.++++++. ++.+.+|
T Consensus 398 d~~YvaAGS~dgsv~iW~v~tgKlE~~l~~--------------s~s~~aI~s~~W~~sG~~Llsadk-~~~v~lW 458 (459)
T KOG0288|consen 398 DGSYVAAGSADGSVYIWSVFTGKLEKVLSL--------------STSNAAITSLSWNPSGSGLLSADK-QKAVTLW 458 (459)
T ss_pred CCceeeeccCCCcEEEEEccCceEEEEecc--------------CCCCcceEEEEEcCCCchhhcccC-CcceEec
Confidence 999999999999999999999986654321 112237999999999999999998 9999998
No 99
>KOG2048|consensus
Probab=99.92 E-value=2.4e-22 Score=241.93 Aligned_cols=284 Identities=18% Similarity=0.225 Sum_probs=225.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEeCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q psy9598 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG-KLLATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP 552 (1915)
Q Consensus 475 H~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg-~~~~~l~gH-~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~ 552 (1915)
-...|+|+||+...+.||.|-.||.|-||++..+ -+...+.|+ ...|-+|+|+ ++..|+|.+.+|.|.-||+.++++
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~ 102 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQ 102 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCce
Confidence 3589999999999999999999999999999876 344566666 4579999999 455788888999999999999999
Q ss_pred EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 553 ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 553 ~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
...+....+.|++++.+|.. ..++.||.||.+.+++...+.......+ ....+.|.|++|++++..
T Consensus 103 ~~~~d~~gg~IWsiai~p~~----~~l~IgcddGvl~~~s~~p~~I~~~r~l----------~rq~sRvLslsw~~~~~~ 168 (691)
T KOG2048|consen 103 KYNIDSNGGAIWSIAINPEN----TILAIGCDDGVLYDFSIGPDKITYKRSL----------MRQKSRVLSLSWNPTGTK 168 (691)
T ss_pred eEEecCCCcceeEEEeCCcc----ceEEeecCCceEEEEecCCceEEEEeec----------ccccceEEEEEecCCccE
Confidence 99999999999999999954 8999999999888887766643322222 233588999999999999
Q ss_pred EEEEeCCCeEEEEEecCCCCCceeEE-----ecc-CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccc
Q psy9598 633 LATGSGDHHVRVYKMDGVDSPLGILE-----VEE-HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT 706 (1915)
Q Consensus 633 Lasgs~Dg~I~IwDl~~~~~~~~i~~-----l~~-h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~ 706 (1915)
|++|+.||.|++||+....... +.+ +.. ...-|++|.|-.++ .|++|..-|+|.+||...+...
T Consensus 169 i~~Gs~Dg~Iriwd~~~~~t~~-~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLi-------- 238 (691)
T KOG2048|consen 169 IAGGSIDGVIRIWDVKSGQTLH-IITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLI-------- 238 (691)
T ss_pred EEecccCceEEEEEcCCCceEE-EeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchh--------
Confidence 9999999999999995433222 111 111 23457888887554 7999999999999998877632
Q ss_pred cCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCce----EEEeeCCCCCeEEEEEccCCCCEEEE
Q psy9598 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL----VQVLKGHTNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 707 ~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~----i~~l~gH~~~V~sl~~sp~dg~~LaS 782 (1915)
.....|...|.+++.++++.++++++- |+.|..|...+... ......|...|.+++..+ ..|++
T Consensus 239 --------qS~~~h~adVl~Lav~~~~d~vfsaGv-d~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~---~~l~s 306 (691)
T KOG2048|consen 239 --------QSHSCHDADVLALAVADNEDRVFSAGV-DPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIE---NALIS 306 (691)
T ss_pred --------hhhhhhhcceeEEEEcCCCCeEEEccC-CCceEEEEecCCccceeeeccccCCcccceeeeeec---ceEEe
Confidence 234558889999999999999999998 99998888766532 223347888899999887 48888
Q ss_pred EecCceEEEEECC
Q psy9598 783 AGHDGLIIIWDIL 795 (1915)
Q Consensus 783 gs~DG~I~IWdl~ 795 (1915)
||.|+++.+-...
T Consensus 307 gG~d~~l~i~~s~ 319 (691)
T KOG2048|consen 307 GGRDFTLAICSSR 319 (691)
T ss_pred cceeeEEEEcccc
Confidence 9988887776543
No 100
>KOG0316|consensus
Probab=99.92 E-value=1e-23 Score=224.04 Aligned_cols=264 Identities=17% Similarity=0.227 Sum_probs=218.5
Q ss_pred CccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEE
Q psy9598 445 SREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524 (1915)
Q Consensus 445 ~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~L 524 (1915)
.-.++.+.++++.+|... .-.++++..||...|..++.+.|+..|++|+.|..|.+||+.||+.++.|+||.+.|+.+
T Consensus 30 nY~ltcGsdrtvrLWNp~--rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV 107 (307)
T KOG0316|consen 30 NYCLTCGSDRTVRLWNPL--RGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTV 107 (307)
T ss_pred CEEEEcCCCceEEeeccc--ccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEE
Confidence 345678889999999643 334567899999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCEEEEEeCCCcEEEEECCC--CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccce
Q psy9598 525 AIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT 602 (1915)
Q Consensus 525 afspdg~~LaSgs~DgtIrVWDl~t--g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~ 602 (1915)
.|+.+...+++|+.|.+|++||.++ .++++.+....+.|.+|.... ..|++||.||+++.||++.+......
T Consensus 108 ~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~------heIvaGS~DGtvRtydiR~G~l~sDy 181 (307)
T KOG0316|consen 108 RFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAE------HEIVAGSVDGTVRTYDIRKGTLSSDY 181 (307)
T ss_pred EecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecc------cEEEeeccCCcEEEEEeecceeehhh
Confidence 9999999999999999999999975 578899988889999999976 78999999999999999988542222
Q ss_pred eccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCee--EEEEcCCCCEEEE
Q psy9598 603 VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVD--SIQWSHSHLRFVS 680 (1915)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~--sl~fspdg~~L~s 680 (1915)
. ..+|+|++|+++|+.+++++.|++|++.|- .+...+....+|.+.-. ..+++....++++
T Consensus 182 ~--------------g~pit~vs~s~d~nc~La~~l~stlrLlDk---~tGklL~sYkGhkn~eykldc~l~qsdthV~s 244 (307)
T KOG0316|consen 182 F--------------GHPITSVSFSKDGNCSLASSLDSTLRLLDK---ETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFS 244 (307)
T ss_pred c--------------CCcceeEEecCCCCEEEEeeccceeeeccc---chhHHHHHhcccccceeeeeeeecccceeEEe
Confidence 1 257999999999999999999999999997 44556667788877543 3457777889999
Q ss_pred EeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEE
Q psy9598 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 750 (1915)
Q Consensus 681 gs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD 750 (1915)
||.||.|.+||+.....+... .......|..++++|.-..+++++ ++.+..|-
T Consensus 245 gSEDG~Vy~wdLvd~~~~sk~---------------~~~~~v~v~dl~~hp~~~~f~~A~--~~~~~~~~ 297 (307)
T KOG0316|consen 245 GSEDGKVYFWDLVDETQISKL---------------SVVSTVIVTDLSCHPTMDDFITAT--GHGDLFWY 297 (307)
T ss_pred ccCCceEEEEEeccceeeeee---------------ccCCceeEEeeecccCccceeEec--CCceecee
Confidence 999999999999876533211 011223378899999877777776 45666664
No 101
>KOG0268|consensus
Probab=99.92 E-value=1.7e-24 Score=242.65 Aligned_cols=286 Identities=17% Similarity=0.346 Sum_probs=227.0
Q ss_pred EecCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q psy9598 471 VNLGHLSAVFCVLFDKLG-EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg-~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t 549 (1915)
.|.||.++|.|++=+|.. ..+|+|+.||.|+|||+....++.+|..|.+.|..|+++. ..+++++.|.+|+.|-+..
T Consensus 61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~ 138 (433)
T KOG0268|consen 61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG 138 (433)
T ss_pred hccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC
Confidence 567999999999999977 7899999999999999999999999999999999999987 5788999999999999875
Q ss_pred CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC
Q psy9598 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629 (1915)
Q Consensus 550 g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd 629 (1915)
.+++++.+. ..+..|.-+- .+..++|||.+ |-|||......+..+... ...|.|+.|+|.
T Consensus 139 -~p~~tilg~-s~~~gIdh~~----~~~~FaTcGe~--i~IWD~~R~~Pv~smswG------------~Dti~svkfNpv 198 (433)
T KOG0268|consen 139 -PPLHTILGK-SVYLGIDHHR----KNSVFATCGEQ--IDIWDEQRDNPVSSMSWG------------ADSISSVKFNPV 198 (433)
T ss_pred -Ccceeeecc-cccccccccc----ccccccccCce--eeecccccCCccceeecC------------CCceeEEecCCC
Confidence 467777553 3445555443 33678888764 899998766554444433 467999999997
Q ss_pred Cc-EEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccC
Q psy9598 630 GL-FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708 (1915)
Q Consensus 630 g~-~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~ 708 (1915)
.. .|++|+.|+.|.|||++.......+ .+ ...-+.|+|+|.+-.|++|+.|..++.||++...
T Consensus 199 ETsILas~~sDrsIvLyD~R~~~Pl~KV-i~---~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~------------ 262 (433)
T KOG0268|consen 199 ETSILASCASDRSIVLYDLRQASPLKKV-IL---TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS------------ 262 (433)
T ss_pred cchheeeeccCCceEEEecccCCcccee-ee---eccccceecCccccceeeccccccceehhhhhhc------------
Confidence 54 5677779999999999654332222 22 3345678999988899999999999999998654
Q ss_pred CCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC-CCCCeEEEEEccCCCCEEEEEecCc
Q psy9598 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG-HTNEVFVLESHPFDSRVLLSAGHDG 787 (1915)
Q Consensus 709 ~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g-H~~~V~sl~~sp~dg~~LaSgs~DG 787 (1915)
.......+|...|..|.|||.|+-+++|+. |.+|+||.+..+...-++.. .-..|+||.|+- |..++++||.||
T Consensus 263 ---~p~~v~~dhvsAV~dVdfsptG~Efvsgsy-DksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~-Dskyi~SGSdd~ 337 (433)
T KOG0268|consen 263 ---RPLNVHKDHVSAVMDVDFSPTGQEFVSGSY-DKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSM-DSKYIISGSDDG 337 (433)
T ss_pred ---ccchhhcccceeEEEeccCCCcchhccccc-cceEEEeecCCCcchhhhhHhhhheeeEEEEec-cccEEEecCCCc
Confidence 122345668899999999999999999998 99999999987654333211 123689999999 999999999999
Q ss_pred eEEEEECCCCcc
Q psy9598 788 LIIIWDILSSKQ 799 (1915)
Q Consensus 788 ~I~IWdl~s~~~ 799 (1915)
.|++|.....+.
T Consensus 338 nvRlWka~Asek 349 (433)
T KOG0268|consen 338 NVRLWKAKASEK 349 (433)
T ss_pred ceeeeecchhhh
Confidence 999998876544
No 102
>KOG1408|consensus
Probab=99.92 E-value=5.6e-23 Score=244.95 Aligned_cols=328 Identities=19% Similarity=0.220 Sum_probs=258.7
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCcE---EEEEeCCCCCEEEEEEeCC-----------CCEEEEEeCCCcEEEE
Q psy9598 480 FCVLFDKLGEVIVTGADDLLIKLWRARDGKL---LATLRGCSGEISDIAIDNR-----------NILLAAGTVDKTIRIW 545 (1915)
Q Consensus 480 ~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~---~~~l~gH~~~I~~Lafspd-----------g~~LaSgs~DgtIrVW 545 (1915)
.++.|++....|.+.-.|..|.|||+.+-.. ...+--|...|+++.--|. ...+++++.|++||+|
T Consensus 328 IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW 407 (1080)
T KOG1408|consen 328 IACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLW 407 (1080)
T ss_pred eEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEe
Confidence 3677999999999999999999999987532 2344558888888876551 2368999999999999
Q ss_pred ECCCCceEEE-------------------------------------eecCCCCeEEEEeccCccCCCcEEEEEeCCCeE
Q psy9598 546 NLQTLAPISV-------------------------------------LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588 (1915)
Q Consensus 546 Dl~tg~~~~~-------------------------------------l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI 588 (1915)
++..+..-.+ ..+....|.+|+.+| ++++|++|..-|+|
T Consensus 408 ~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp----~gqhLAsGDr~Gnl 483 (1080)
T KOG1408|consen 408 DLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP----DGQHLASGDRGGNL 483 (1080)
T ss_pred ecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC----CcceecccCccCce
Confidence 9975211100 001224689999999 55999999999999
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECC---CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCC
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP---GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 665 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp---dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~ 665 (1915)
++|++...... ....+|...|.|+.|+. ..++||+++.|..|+|||+. .....+.++.+|...
T Consensus 484 rVy~Lq~l~~~------------~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~--rny~l~qtld~HSss 549 (1080)
T KOG1408|consen 484 RVYDLQELEYT------------CFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVK--RNYDLVQTLDGHSSS 549 (1080)
T ss_pred EEEEehhhhhh------------hheecccceeEEEeecCchhhhHhhhhccCCceEEEEecc--cccchhhhhcccccc
Confidence 99998765432 23346789999999986 35689999999999999994 344566788999999
Q ss_pred eeEEEEcCCC--CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecC
Q psy9598 666 VDSIQWSHSH--LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 743 (1915)
Q Consensus 666 V~sl~fspdg--~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~D 743 (1915)
|++|.|.-+| ..+++++.|..|.+--.+...-.... ...........+..++..|...++++++. |
T Consensus 550 ITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f-----------~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ-D 617 (1080)
T KOG1408|consen 550 ITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLF-----------PRHTQTLSKTTLYDMAVDPTSKLVVTVCQ-D 617 (1080)
T ss_pred eeEEEEeecCCceEEEeccCchhhheehhccccCceec-----------cccccccccceEEEeeeCCCcceEEEEec-c
Confidence 9999999887 68899999988754322211100000 01112224567889999999999999999 9
Q ss_pred CeEEEEECCCCceEEEeeC---CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEE
Q psy9598 744 FQIKIWDAFNGDLVQVLKG---HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDG 820 (1915)
Q Consensus 744 g~I~vwD~~tg~~i~~l~g---H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~v 820 (1915)
..|+|||+.+|+.+..|+| |.+....|...| .|.||+|.+.|.+|.++|+.++++ +.... +|...|+.+
T Consensus 618 rnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDP-SgiY~atScsdktl~~~Df~sgEc--vA~m~-----GHsE~VTG~ 689 (1080)
T KOG1408|consen 618 RNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDP-SGIYLATSCSDKTLCFVDFVSGEC--VAQMT-----GHSEAVTGV 689 (1080)
T ss_pred cceEEEeccccceeeeecccccCCCceEEEEECC-CccEEEEeecCCceEEEEeccchh--hhhhc-----Ccchheeee
Confidence 9999999999999999984 667788888999 999999999999999999999999 66554 566899999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 821 KWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 821 afSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
.|.+|-++|++.+.||.|.||.+..
T Consensus 690 kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 690 KFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred eecccchhheeecCCceEEEEECch
Confidence 9999999999999999999999875
No 103
>KOG0308|consensus
Probab=99.92 E-value=6.5e-24 Score=253.16 Aligned_cols=284 Identities=16% Similarity=0.270 Sum_probs=230.5
Q ss_pred EEEEe-CCCCEEEEEeCCCcEEEEECCCCc------eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEeccc
Q psy9598 523 DIAID-NRNILLAAGTVDKTIRIWNLQTLA------PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595 (1915)
Q Consensus 523 ~Lafs-pdg~~LaSgs~DgtIrVWDl~tg~------~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~ 595 (1915)
.+..+ |.+++|+|||.||.|++|++.... .+..+..|.+.|+.++.+. ++..|+++|.|.+|++|+...
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~----~~~tlIS~SsDtTVK~W~~~~ 104 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCG----NGKTLISASSDTTVKVWNAHK 104 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhc----CCCceEEecCCceEEEeeccc
Confidence 34444 456789999999999999986422 3678889999999999986 458999999999999999876
Q ss_pred CccccceeccCccccccccCCCCCceEEEEE-CCCCcEEEEEeCCCeEEEEEecCCC-------CCceeEEec-cCCCCe
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSF-SPGGLFLATGSGDHHVRVYKMDGVD-------SPLGILEVE-EHSDKV 666 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f-spdg~~Lasgs~Dg~I~IwDl~~~~-------~~~~i~~l~-~h~~~V 666 (1915)
+. ..+...++.|..+|.|+++ .++..++|+||-|+.|.|||+.... .......+. |+...|
T Consensus 105 ~~----------~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~si 174 (735)
T KOG0308|consen 105 DN----------TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSI 174 (735)
T ss_pred Cc----------chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccce
Confidence 52 1223445678899999999 7888899999999999999996431 112222334 888999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeE
Q psy9598 667 DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQI 746 (1915)
Q Consensus 667 ~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I 746 (1915)
++++..+.|..|++|+..+.+++||.++...+ ....+|...|.++..+.||+.++++++ ||+|
T Consensus 175 YSLA~N~t~t~ivsGgtek~lr~wDprt~~ki----------------mkLrGHTdNVr~ll~~dDGt~~ls~sS-DgtI 237 (735)
T KOG0308|consen 175 YSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKI----------------MKLRGHTDNVRVLLVNDDGTRLLSASS-DGTI 237 (735)
T ss_pred eeeecCCcceEEEecCcccceEEeccccccce----------------eeeeccccceEEEEEcCCCCeEeecCC-CceE
Confidence 99999999999999999999999999887632 234478899999999999999999999 9999
Q ss_pred EEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCC
Q psy9598 747 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDG 826 (1915)
Q Consensus 747 ~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg 826 (1915)
++||+....|++++..|...|+++..+| +-..+++|+.||.|..=|+.+... ...+. ....+|..+..+...
T Consensus 238 rlWdLgqQrCl~T~~vH~e~VWaL~~~~-sf~~vYsG~rd~~i~~Tdl~n~~~--~tlic-----k~daPv~~l~~~~~~ 309 (735)
T KOG0308|consen 238 RLWDLGQQRCLATYIVHKEGVWALQSSP-SFTHVYSGGRDGNIYRTDLRNPAK--STLIC-----KEDAPVLKLHLHEHD 309 (735)
T ss_pred EeeeccccceeeeEEeccCceEEEeeCC-CcceEEecCCCCcEEecccCCchh--heEee-----cCCCchhhhhhcccc
Confidence 9999999999999999999999999998 889999999999999999988533 22222 234567777777555
Q ss_pred CEEEEEeCCCeEEEEeCCC
Q psy9598 827 TTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 827 ~~Lasg~~dG~I~Iwdl~s 845 (1915)
+-+-+++.|+.|.-|.+..
T Consensus 310 ~~~WvtTtds~I~rW~~~~ 328 (735)
T KOG0308|consen 310 NSVWVTTTDSSIKRWKLEP 328 (735)
T ss_pred CCceeeeccccceecCCcc
Confidence 5557778888999997654
No 104
>KOG0310|consensus
Probab=99.92 E-value=2.4e-23 Score=242.74 Aligned_cols=282 Identities=21% Similarity=0.266 Sum_probs=229.9
Q ss_pred CCCEEEEEEeCCCCE-EEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccC
Q psy9598 518 SGEISDIAIDNRNIL-LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLD 596 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~-LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~ 596 (1915)
.+.|++|+|+|...+ +|+.+ .-.|.||+..+.....++......|.++.|.. ||.+|++|...|.|++||+.+.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~----DG~LlaaGD~sG~V~vfD~k~r 100 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRS----DGRLLAAGDESGHVKVFDMKSR 100 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeec----CCeEEEccCCcCcEEEeccccH
Confidence 467999999995432 33333 45799999998888888888889999999997 5699999999999999996653
Q ss_pred ccccceeccCccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC
Q psy9598 597 IDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675 (1915)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg 675 (1915)
.. ...+.+|..+|..+.|+|.+ ..|++|+.|+.+++||+.+.. ....+.+|++.|.|.+|+|..
T Consensus 101 ~i------------LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~---v~~~l~~htDYVR~g~~~~~~ 165 (487)
T KOG0310|consen 101 VI------------LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY---VQAELSGHTDYVRCGDISPAN 165 (487)
T ss_pred HH------------HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE---EEEEecCCcceeEeeccccCC
Confidence 22 22345678999999999965 567788889999999995432 366899999999999999865
Q ss_pred C-EEEEEeCCCcEEEEEccCCc-eEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC
Q psy9598 676 L-RFVSGSRDGTALIWYYKCSQ-WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN 753 (1915)
Q Consensus 676 ~-~L~sgs~DG~I~IWDl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t 753 (1915)
. .++|||.||+|++||++... +.. ...|..+|-.+.+-|.|..|+++++ ..|+|||+.+
T Consensus 166 ~hivvtGsYDg~vrl~DtR~~~~~v~-----------------elnhg~pVe~vl~lpsgs~iasAgG--n~vkVWDl~~ 226 (487)
T KOG0310|consen 166 DHIVVTGSYDGKVRLWDTRSLTSRVV-----------------ELNHGCPVESVLALPSGSLIASAGG--NSVKVWDLTT 226 (487)
T ss_pred CeEEEecCCCceEEEEEeccCCceeE-----------------EecCCCceeeEEEcCCCCEEEEcCC--CeEEEEEecC
Confidence 4 88999999999999998763 222 3357889999999999999999884 7899999986
Q ss_pred C-ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEE
Q psy9598 754 G-DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALT 832 (1915)
Q Consensus 754 g-~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg 832 (1915)
| +++..+..|...|+|+++.. ++..|+|||-||.|+|||+.+.+. +..+. -.++|.+++.+|+++.++.|
T Consensus 227 G~qll~~~~~H~KtVTcL~l~s-~~~rLlS~sLD~~VKVfd~t~~Kv--v~s~~------~~~pvLsiavs~dd~t~viG 297 (487)
T KOG0310|consen 227 GGQLLTSMFNHNKTVTCLRLAS-DSTRLLSGSLDRHVKVFDTTNYKV--VHSWK------YPGPVLSIAVSPDDQTVVIG 297 (487)
T ss_pred CceehhhhhcccceEEEEEeec-CCceEeecccccceEEEEccceEE--EEeee------cccceeeEEecCCCceEEEe
Confidence 5 55555556999999999998 889999999999999999877666 44443 45899999999999999999
Q ss_pred eCCCeEEEEeCCCCc
Q psy9598 833 DSYGHLLVYGLGGFK 847 (1915)
Q Consensus 833 ~~dG~I~Iwdl~s~~ 847 (1915)
.++|.+.+-.....+
T Consensus 298 msnGlv~~rr~~~k~ 312 (487)
T KOG0310|consen 298 MSNGLVSIRRREVKK 312 (487)
T ss_pred cccceeeeehhhccc
Confidence 999999887554433
No 105
>PTZ00420 coronin; Provisional
Probab=99.91 E-value=1.4e-22 Score=257.26 Aligned_cols=229 Identities=14% Similarity=0.225 Sum_probs=182.5
Q ss_pred cccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCC-CCEEEEEECCCcEEEEECCCCc--------EEEEEeCCCC
Q psy9598 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGK--------LLATLRGCSG 519 (1915)
Q Consensus 449 tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspd-g~~LaTGs~Dg~I~IWd~~tg~--------~~~~l~gH~~ 519 (1915)
+|+..+.+.+|.... ...+..+.||.+.|++|+|+|+ +.+||||+.||+|+|||+.++. ++..+.+|..
T Consensus 49 gGG~~gvI~L~~~~r--~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~ 126 (568)
T PTZ00420 49 GGGLIGAIRLENQMR--KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK 126 (568)
T ss_pred CCCceeEEEeeecCC--CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC
Confidence 366677888885433 3456788999999999999996 7999999999999999997642 3457889999
Q ss_pred CEEEEEEeCCCCE-EEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc
Q psy9598 520 EISDIAIDNRNIL-LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598 (1915)
Q Consensus 520 ~I~~Lafspdg~~-LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~ 598 (1915)
.|.+|+|+|++.. |++|+.|++|+|||+.++..+..+. |...|.+++|+|+ +.+|++++.|+.|+|||++++..
T Consensus 127 ~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slswspd----G~lLat~s~D~~IrIwD~Rsg~~ 201 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIK----GNLLSGTCVGKHMHIIDPRKQEI 201 (568)
T ss_pred cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCC----CCEEEEEecCCEEEEEECCCCcE
Confidence 9999999998875 5789999999999999998887775 6678999999994 58999999999999999998865
Q ss_pred ccceeccCccccccccCCCCCc-----eEEEEECCCCcEEEEEeCCC----eEEEEEecCCCCCceeEEeccCCCCeeEE
Q psy9598 599 ISKTVFHEPVMFNERIRPGNAH-----ILCSSFSPGGLFLATGSGDH----HVRVYKMDGVDSPLGILEVEEHSDKVDSI 669 (1915)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~-----V~~l~fspdg~~Lasgs~Dg----~I~IwDl~~~~~~~~i~~l~~h~~~V~sl 669 (1915)
+..+.. |.+. +.+..|++++.+|++++.++ .|+|||++....+.....+..+.+.+...
T Consensus 202 i~tl~g------------H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~ 269 (568)
T PTZ00420 202 ASSFHI------------HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPH 269 (568)
T ss_pred EEEEec------------ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEe
Confidence 443322 2222 33445678989999988774 79999997555555555555566666555
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy9598 670 QWSHSHLRFVSGSRDGTALIWYYKCSQ 696 (1915)
Q Consensus 670 ~fspdg~~L~sgs~DG~I~IWDl~~~~ 696 (1915)
...++|.+|++|+.|++|++|++..+.
T Consensus 270 ~D~~tg~l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 270 YDESTGLIYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred eeCCCCCEEEEEECCCeEEEEEccCCc
Confidence 556678999999999999999997664
No 106
>KOG0973|consensus
Probab=99.91 E-value=2.2e-23 Score=263.91 Aligned_cols=282 Identities=21% Similarity=0.306 Sum_probs=221.1
Q ss_pred Ccccccc--CCCeEEEecccCC----------ceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-----
Q psy9598 445 SREYSGP--LSRSLMISSHKYS----------NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----- 507 (1915)
Q Consensus 445 ~r~~tg~--~d~~~~i~~~~~~----------~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t----- 507 (1915)
.+.++|+ .|+...+|....- --++......|.++|+||.|++||.+||+||+|+.|.||....
T Consensus 26 ~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~ 105 (942)
T KOG0973|consen 26 VKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGT 105 (942)
T ss_pred eeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcc
Confidence 4556666 7777777753211 1234467789999999999999999999999999999998762
Q ss_pred -------------CcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccC
Q psy9598 508 -------------GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 508 -------------g~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
.+.+.+|.+|.+.|.+++|+|++.+||++|.|++|.||+..++..+.++.+|.+.|-.+.|.|.+
T Consensus 106 ~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~G-- 183 (942)
T KOG0973|consen 106 VFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIG-- 183 (942)
T ss_pred cccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCcc--
Confidence 13678899999999999999999999999999999999999999999999999999999999965
Q ss_pred CCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC----CCeEEEEEecCC
Q psy9598 575 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG----DHHVRVYKMDGV 650 (1915)
Q Consensus 575 d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~----Dg~I~IwDl~~~ 650 (1915)
++|++-+.|++|+||++..-.....+... . .-.+....+..++|||||.+|+++.. -.++.|.+-
T Consensus 184 --ky~ASqsdDrtikvwrt~dw~i~k~It~p--f----~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR--- 252 (942)
T KOG0973|consen 184 --KYFASQSDDRTLKVWRTSDWGIEKSITKP--F----EESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIER--- 252 (942)
T ss_pred --CeeeeecCCceEEEEEcccceeeEeeccc--h----hhCCCcceeeecccCCCcCeecchhhccCCcceeEEEec---
Confidence 99999999999999996653322222111 1 01133466889999999999998643 346777665
Q ss_pred CCCceeEEeccCCCCeeEEEEcCC-------------CC----EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcc
Q psy9598 651 DSPLGILEVEEHSDKVDSIQWSHS-------------HL----RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE 713 (1915)
Q Consensus 651 ~~~~~i~~l~~h~~~V~sl~fspd-------------g~----~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~ 713 (1915)
.....-..+-||..++.++.|+|. ++ .+++||.|++|.||.....+...
T Consensus 253 ~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~-------------- 318 (942)
T KOG0973|consen 253 GTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLF-------------- 318 (942)
T ss_pred CCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchh--------------
Confidence 344445678899999999999972 11 67899999999999775444221
Q ss_pred ccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc
Q psy9598 714 TSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD 755 (1915)
Q Consensus 714 ~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~ 755 (1915)
....-....|..++|+|||..|++++. ||+|.++.+...+
T Consensus 319 -vi~~lf~~SI~DmsWspdG~~LfacS~-DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 319 -VIHNLFNKSIVDMSWSPDGFSLFACSL-DGTVALIHFEEKE 358 (942)
T ss_pred -hhhhhhcCceeeeeEcCCCCeEEEEec-CCeEEEEEcchHH
Confidence 112234567999999999999999998 9999999886543
No 107
>PTZ00421 coronin; Provisional
Probab=99.91 E-value=2.8e-22 Score=254.11 Aligned_cols=210 Identities=15% Similarity=0.191 Sum_probs=172.3
Q ss_pred EecCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCC-------cEEEEEeCCCCCEEEEEEeCCC-CEEEEEeCCCc
Q psy9598 471 VNLGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDG-------KLLATLRGCSGEISDIAIDNRN-ILLAAGTVDKT 541 (1915)
Q Consensus 471 ~l~gH~~~V~~vafsp-dg~~LaTGs~Dg~I~IWd~~tg-------~~~~~l~gH~~~I~~Lafspdg-~~LaSgs~Dgt 541 (1915)
.|.||.+.|++|+|+| ++.+||+|+.||+|+|||+.++ .++..+.+|...|.+|+|+|++ .+|++|+.|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 4789999999999999 8899999999999999999765 3577899999999999999985 69999999999
Q ss_pred EEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCC-c
Q psy9598 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA-H 620 (1915)
Q Consensus 542 IrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 620 (1915)
|+|||+.++..+..+.+|...|.+++|+|+ +.+|++|+.||+|++||++++..+..+.. |.+ .
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~spd----G~lLatgs~Dg~IrIwD~rsg~~v~tl~~------------H~~~~ 213 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNLD----GSLLCTTSKDKKLNIIDPRDGTIVSSVEA------------HASAK 213 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEECC----CCEEEEecCCCEEEEEECCCCcEEEEEec------------CCCCc
Confidence 999999999999999999999999999994 58999999999999999998764433322 222 3
Q ss_pred eEEEEECCCCcEEEEEe----CCCeEEEEEecCCCCCceeEEecc-CCCCeeEEEEcCCCCEEEEEe-CCCcEEEEEccC
Q psy9598 621 ILCSSFSPGGLFLATGS----GDHHVRVYKMDGVDSPLGILEVEE-HSDKVDSIQWSHSHLRFVSGS-RDGTALIWYYKC 694 (1915)
Q Consensus 621 V~~l~fspdg~~Lasgs----~Dg~I~IwDl~~~~~~~~i~~l~~-h~~~V~sl~fspdg~~L~sgs-~DG~I~IWDl~~ 694 (1915)
+..+.|.+++..|++++ .|+.|+|||++....+. ..... +...+....|++++.+|++|+ .||.|++||+..
T Consensus 214 ~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~--~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~ 291 (493)
T PTZ00421 214 SQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPY--STVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN 291 (493)
T ss_pred ceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCce--eEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence 45677888877777654 47899999996543332 22222 334566677999999999887 599999999988
Q ss_pred CceE
Q psy9598 695 SQWR 698 (1915)
Q Consensus 695 ~~~~ 698 (1915)
+...
T Consensus 292 ~~~~ 295 (493)
T PTZ00421 292 ERLT 295 (493)
T ss_pred CceE
Confidence 7643
No 108
>PTZ00420 coronin; Provisional
Probab=99.91 E-value=2e-22 Score=255.95 Aligned_cols=246 Identities=14% Similarity=0.179 Sum_probs=188.0
Q ss_pred EECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCCCc--------eEEEeecCCCCeE
Q psy9598 494 GADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLA--------PISVLVGHQGIIT 564 (1915)
Q Consensus 494 Gs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspd-g~~LaSgs~DgtIrVWDl~tg~--------~~~~l~~h~~~V~ 564 (1915)
|+.+|.|+||++.....+..+.+|.+.|.+|+|+|+ +.+||||+.||+|+|||+.++. ++..+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 677899999999888889999999999999999997 7899999999999999997642 3557889999999
Q ss_pred EEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEE
Q psy9598 565 GVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644 (1915)
Q Consensus 565 sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~I 644 (1915)
+|+|+|.+ ..+|++|+.||+|+|||+.++.....+. +...|.+++|+++|.+|++++.|+.|+|
T Consensus 130 sVaf~P~g---~~iLaSgS~DgtIrIWDl~tg~~~~~i~-------------~~~~V~SlswspdG~lLat~s~D~~IrI 193 (568)
T PTZ00420 130 IIDWNPMN---YYIMCSSGFDSFVNIWDIENEKRAFQIN-------------MPKKLSSLKWNIKGNLLSGTCVGKHMHI 193 (568)
T ss_pred EEEECCCC---CeEEEEEeCCCeEEEEECCCCcEEEEEe-------------cCCcEEEEEECCCCCEEEEEecCCEEEE
Confidence 99999953 3467899999999999998875332221 2357999999999999999999999999
Q ss_pred EEecCCCCCceeEEeccCCCCeeEE-----EEcCCCCEEEEEeCCC----cEEEEEccCCc-eEEeeecccccCCCCccc
Q psy9598 645 YKMDGVDSPLGILEVEEHSDKVDSI-----QWSHSHLRFVSGSRDG----TALIWYYKCSQ-WRFIRLDMNTCLPHTKET 714 (1915)
Q Consensus 645 wDl~~~~~~~~i~~l~~h~~~V~sl-----~fspdg~~L~sgs~DG----~I~IWDl~~~~-~~~~~~~~~~~~~~~~~~ 714 (1915)
||++. ...+..+.+|.+.+.+. .|++++.+|++++.|+ .|+|||++... .+...
T Consensus 194 wD~Rs---g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~------------- 257 (568)
T PTZ00420 194 IDPRK---QEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTM------------- 257 (568)
T ss_pred EECCC---CcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEE-------------
Confidence 99953 44566788898765443 3458888999988774 79999998532 22110
Q ss_pred cccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee--CCCCCeEEEEEcc
Q psy9598 715 SDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK--GHTNEVFVLESHP 774 (1915)
Q Consensus 715 ~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~--gH~~~V~sl~~sp 774 (1915)
......+.+......++|.++++|.. |+.|++|++..+.+ ..+. .+..++.+++|.|
T Consensus 258 -~ld~~~~~L~p~~D~~tg~l~lsGkG-D~tIr~~e~~~~~~-~~l~~~~s~~p~~g~~f~P 316 (568)
T PTZ00420 258 -SIDNASAPLIPHYDESTGLIYLIGKG-DGNCRYYQHSLGSI-RKVNEYKSCSPFRSFGFLP 316 (568)
T ss_pred -EecCCccceEEeeeCCCCCEEEEEEC-CCeEEEEEccCCcE-EeecccccCCCccceEEcc
Confidence 11112233333444555777777777 99999999987643 3332 2456778888888
No 109
>cd05505 Bromo_WSTF_like Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two chromatin remodeling complexes, WINAC and WICH. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.91 E-value=8.2e-25 Score=213.93 Aligned_cols=95 Identities=29% Similarity=0.500 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCC
Q psy9598 119 KNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRS 198 (1915)
Q Consensus 119 ~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s 198 (1915)
.++|..||+.|++++.++||+.|||..++||||+||++||||+||++||+++.|.|+++|.+||+|||.||++||+++ |
T Consensus 2 ~~~c~~il~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~~-s 80 (97)
T cd05505 2 LQKCEEILSKILKYRFSWPFREPVTADEAEDYKKVITNPMDLQTMQTKCSCGSYSSVQEFLDDMKLVFSNAEKYYENG-S 80 (97)
T ss_pred HHHHHHHHHHHHhCCCcccccCCCChhhcccHHHHcCCcCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCCC-C
Confidence 367999999999999999999999999999999999999999999999999999999999999999999999999977 9
Q ss_pred HHHHHHHHHHHHHHHH
Q psy9598 199 KIYIMTTRLSEFAEEH 214 (1915)
Q Consensus 199 ~i~~~a~~l~~~f~~~ 214 (1915)
.|+.+|.+|+++|.++
T Consensus 81 ~i~~~a~~le~~f~~~ 96 (97)
T cd05505 81 YVLSCMRKTEQCCVNL 96 (97)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 110
>cd05495 Bromo_cbp_like Bromodomain, cbp_like subfamily. Cbp (CREB binding protein or CREBBP) is an acetyltransferase acting on histone, which gives a specific tag for transcriptional activation and also acetylates non-histone proteins. CREBBP binds specifically to phosphorylated CREB protein and augments the activity of phosphorylated CREB to activate transcription of cAMP-responsive genes. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.91 E-value=1.3e-24 Score=217.44 Aligned_cols=104 Identities=38% Similarity=0.640 Sum_probs=99.0
Q ss_pred chhHHHHHHHHHHHHhcC-CCCCCCCCCCCCC--CCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhh
Q psy9598 115 PFNWKNECREVLETLWVC-PDSEPFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191 (1915)
Q Consensus 115 ~~~~~~~~~~il~~l~~~-~~~~~F~~pvd~~--~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~ 191 (1915)
+.+|++.|..+|++|+++ +.|+||++|||.. ++||||+||++||||+||++||.+|.|.++.+|.+||+|||.||+.
T Consensus 1 ~~~l~~~~~~il~~l~~~~~~s~~F~~PV~~~~~~~pdY~~iIk~PmDL~tI~~kL~~~~Y~s~~ef~~D~~li~~Na~~ 80 (108)
T cd05495 1 PEELRQALMPTLEKLYKQDPESLPFRQPVDPKLLGIPDYFDIVKNPMDLSTIRRKLDTGQYQDPWQYVDDVWLMFDNAWL 80 (108)
T ss_pred CHHHHHHHHHHHHHHHHcCcccchhcCCCCccccCCCcHHHHhCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 467999999999999999 9999999999954 8999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 192 YNQNKRSKIYIMTTRLSEFAEEHLRRLT 219 (1915)
Q Consensus 192 yN~~~~s~i~~~a~~l~~~f~~~~~~~~ 219 (1915)
||+++ |.+|.+|.+|+++|++.++.++
T Consensus 81 yN~~~-s~i~~~a~~l~~~F~~~~~~~~ 107 (108)
T cd05495 81 YNRKT-SRVYKYCTKLAEVFEQEIDPVM 107 (108)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHHHHHHh
Confidence 99976 9999999999999999998774
No 111
>KOG2106|consensus
Probab=99.91 E-value=8.8e-22 Score=228.56 Aligned_cols=347 Identities=15% Similarity=0.263 Sum_probs=262.4
Q ss_pred cCCCeEEEecccCCceeeeE-EecCCC-CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeC
Q psy9598 451 PLSRSLMISSHKYSNLRQHY-VNLGHL-SAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN 528 (1915)
Q Consensus 451 ~~d~~~~i~~~~~~~~~~~~-~l~gH~-~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafsp 528 (1915)
+..+.+.+|+.....+.... .+.++. .-|.||+|.++|. ++||..+|.|.||+..+.+..+....|.+.|.+|+.-.
T Consensus 219 ~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr 297 (626)
T KOG2106|consen 219 CGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLR 297 (626)
T ss_pred eCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEec
Confidence 33456778877666554433 344433 5799999999986 68999999999999988888887779999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCC------------C----------------------------ceEEEeecCCCCeEEEEe
Q psy9598 529 RNILLAAGTVDKTIRIWNLQT------------L----------------------------APISVLVGHQGIITGVNF 568 (1915)
Q Consensus 529 dg~~LaSgs~DgtIrVWDl~t------------g----------------------------~~~~~l~~h~~~V~sl~f 568 (1915)
+|.+| ||+.|..|..||-.- | ....+..+|....+.++.
T Consensus 298 ~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~ 376 (626)
T KOG2106|consen 298 DGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLAT 376 (626)
T ss_pred CccEe-ecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEc
Confidence 99755 599999999998320 0 001223578888999999
Q ss_pred ccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEec
Q psy9598 569 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648 (1915)
Q Consensus 569 sp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~ 648 (1915)
+|+. ..|++++.|+.+++|+ ..+......+. .++.|+.|+|.| .||+|+..|...|.|..
T Consensus 377 hps~----~q~~T~gqdk~v~lW~--~~k~~wt~~~~-------------d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e 436 (626)
T KOG2106|consen 377 HPSK----NQLLTCGQDKHVRLWN--DHKLEWTKIIE-------------DPAECADFHPSG-VVAVGTATGRWFVLDTE 436 (626)
T ss_pred CCCh----hheeeccCcceEEEcc--CCceeEEEEec-------------CceeEeeccCcc-eEEEeeccceEEEEecc
Confidence 9955 8999999999999999 33333333333 668899999999 99999999999999984
Q ss_pred CCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEE
Q psy9598 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVA 728 (1915)
Q Consensus 649 ~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va 728 (1915)
+ .. +..+...+.+++++.|+|+|.+|+.|+.|+.|.||-+......+.... ..+...|+.+.
T Consensus 437 ~---~~-lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~--------------k~~gs~ithLD 498 (626)
T KOG2106|consen 437 T---QD-LVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVG--------------KCSGSPITHLD 498 (626)
T ss_pred c---ce-eEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEee--------------eecCceeEEee
Confidence 3 22 233333388999999999999999999999999998876554332211 11337899999
Q ss_pred ECCCCCEEEEEEecCCeEEEEECCCCceEEE--------------e----eCCCCCeEEEEEccCCCCEEEEEecCceEE
Q psy9598 729 WDASDRWVITAINFNFQIKIWDAFNGDLVQV--------------L----KGHTNEVFVLESHPFDSRVLLSAGHDGLII 790 (1915)
Q Consensus 729 ~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~--------------l----~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~ 790 (1915)
||+|+++|.+-+. |-.|-.|.......+.. | ..|...|..++-+. ...++++|...|.|+
T Consensus 499 wS~Ds~~~~~~S~-d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~-~~~~lA~gdd~g~v~ 576 (626)
T KOG2106|consen 499 WSSDSQFLVSNSG-DYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSH-CEKLLASGDDFGKVH 576 (626)
T ss_pred ecCCCceEEeccC-ceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhh-hhhhhhccccCceEE
Confidence 9999999999988 99999995432221111 1 13445566666666 788999999999999
Q ss_pred EEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 791 IWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 791 IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
||...-.+. ...++ ..+.|.+.|.+++|.-+..+|++.+.|..|..|.+
T Consensus 577 lf~yPc~s~--rA~~h--e~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 577 LFSYPCSSP--RAPSH--EYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred EEccccCCC--cccce--eeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence 998765444 22232 23456688999999998888888889999999986
No 112
>KOG0294|consensus
Probab=99.91 E-value=8e-23 Score=226.29 Aligned_cols=248 Identities=17% Similarity=0.264 Sum_probs=203.3
Q ss_pred ceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCC--EEEEEeCCCcE
Q psy9598 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI--LLAAGTVDKTI 542 (1915)
Q Consensus 465 ~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~--~LaSgs~DgtI 542 (1915)
++...+.+..|.++|+|||++ |.|+|+||.|-+|+|||+.+...+..+..|.+.|++|.|.+.-. .|++|+.||.|
T Consensus 32 ~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i 109 (362)
T KOG0294|consen 32 TLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHI 109 (362)
T ss_pred eeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcE
Confidence 455567788999999999998 99999999999999999999999999999999999999998765 89999999999
Q ss_pred EEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceE
Q psy9598 543 RIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 543 rVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 622 (1915)
.+|+.....++.++.+|.+.|+.|+.+|.+ .+.++.+.|+.+++||+-.+.......+. ....
T Consensus 110 ~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~----KLALsVg~D~~lr~WNLV~Gr~a~v~~L~-------------~~at 172 (362)
T KOG0294|consen 110 IIWRVGSWELLKSLKAHKGQVTDLSIHPSG----KLALSVGGDQVLRTWNLVRGRVAFVLNLK-------------NKAT 172 (362)
T ss_pred EEEEcCCeEEeeeecccccccceeEecCCC----ceEEEEcCCceeeeehhhcCccceeeccC-------------Ccce
Confidence 999999999999999999999999999954 89999999999999999988654433333 2334
Q ss_pred EEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 623 ~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
.+.|+|.|.+++.++.+ .|-||.++.... +..-.....+.|+.|. ++..|++|+.|+.|.+||.......
T Consensus 173 ~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v----~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~---- 242 (362)
T KOG0294|consen 173 LVSWSPQGDHFVVSGRN-KIDIYQLDNASV----FREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPL---- 242 (362)
T ss_pred eeEEcCCCCEEEEEecc-EEEEEecccHhH----hhhhhccccceeeeec-CCceEEEecCCceEEEeccCCCccc----
Confidence 59999999988888776 578998843221 1111122456777765 5668999999999999998764422
Q ss_pred cccccCCCCccccccccccccEEEEEE--CCCCCEEEEEEecCCeEEEEECCCC
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAW--DASDRWVITAINFNFQIKIWDAFNG 754 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~--spdg~~L~t~s~~Dg~I~vwD~~tg 754 (1915)
.....|...|-.+.+ .|++.+|+++++ ||.|+|||+...
T Consensus 243 ------------~~~~AH~~RVK~i~~~~~~~~~~lvTaSS-DG~I~vWd~~~~ 283 (362)
T KOG0294|consen 243 ------------TEFLAHENRVKDIASYTNPEHEYLVTASS-DGFIKVWDIDME 283 (362)
T ss_pred ------------eeeecchhheeeeEEEecCCceEEEEecc-CceEEEEEcccc
Confidence 234567888888773 467889999999 999999999765
No 113
>KOG1332|consensus
Probab=99.91 E-value=1.9e-23 Score=223.62 Aligned_cols=255 Identities=24% Similarity=0.339 Sum_probs=207.8
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC---cEEEEEeCCCCCEEEEEEeC--CCCEEEEEeCCCcEEE
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG---KLLATLRGCSGEISDIAIDN--RNILLAAGTVDKTIRI 544 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg---~~~~~l~gH~~~I~~Lafsp--dg~~LaSgs~DgtIrV 544 (1915)
..-.+|.+.|..+..+-.|.+|||++.|++|+||.+... .++.+|.||.++|..++|.. -|.+|||++.||.|.|
T Consensus 5 ~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi 84 (299)
T KOG1332|consen 5 TIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII 84 (299)
T ss_pred ehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence 345689999999999999999999999999999998754 57889999999999999976 7999999999999999
Q ss_pred EECCCCc--eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceE
Q psy9598 545 WNLQTLA--PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 545 WDl~tg~--~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 622 (1915)
|.-.+|+ .......|.+.|++|+|.|.. -+-+|+++|.||.|.|.+++........ .....|...|+
T Consensus 85 Wke~~g~w~k~~e~~~h~~SVNsV~waphe--ygl~LacasSDG~vsvl~~~~~g~w~t~---------ki~~aH~~Gvn 153 (299)
T KOG1332|consen 85 WKEENGRWTKAYEHAAHSASVNSVAWAPHE--YGLLLACASSDGKVSVLTYDSSGGWTTS---------KIVFAHEIGVN 153 (299)
T ss_pred EecCCCchhhhhhhhhhcccceeecccccc--cceEEEEeeCCCcEEEEEEcCCCCccch---------hhhhccccccc
Confidence 9988774 345667899999999999975 5789999999999999998765211111 12235677899
Q ss_pred EEEECCC---C-----------cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC----CEEEEEeCC
Q psy9598 623 CSSFSPG---G-----------LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH----LRFVSGSRD 684 (1915)
Q Consensus 623 ~l~fspd---g-----------~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg----~~L~sgs~D 684 (1915)
+++|.|. | ..|++|+.|..|+||+.+.. ....-..+.+|.+.|..++|.|.- .+|++||.|
T Consensus 154 sVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~-~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqD 232 (299)
T KOG1332|consen 154 SVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD-SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQD 232 (299)
T ss_pred eeeecCcCCCccccccCcccccceeeccCCccceeeeecCCc-chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCC
Confidence 9999986 4 46999999999999999543 334444589999999999999974 479999999
Q ss_pred CcEEEEEccCC--ceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 685 GTALIWYYKCS--QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 685 G~I~IWDl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
|+|.||..... .|.. ..+......+..+.||..|..|++++. |+.|.+|--.
T Consensus 233 g~viIwt~~~e~e~wk~---------------tll~~f~~~~w~vSWS~sGn~LaVs~G-dNkvtlwke~ 286 (299)
T KOG1332|consen 233 GTVIIWTKDEEYEPWKK---------------TLLEEFPDVVWRVSWSLSGNILAVSGG-DNKVTLWKEN 286 (299)
T ss_pred CcEEEEEecCccCcccc---------------cccccCCcceEEEEEeccccEEEEecC-CcEEEEEEeC
Confidence 99999965521 1211 112225567999999999999999999 9999999743
No 114
>KOG1273|consensus
Probab=99.91 E-value=1.1e-22 Score=224.10 Aligned_cols=296 Identities=15% Similarity=0.242 Sum_probs=223.3
Q ss_pred EEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeec
Q psy9598 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVG 558 (1915)
Q Consensus 479 V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~ 558 (1915)
..|+.|++.|.+||+|+.||.|.|||+.|...-..|.+|..+|+||+||++|+.|+|+|.|..|.+||+..|.+++.+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999998886
Q ss_pred CCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC
Q psy9598 559 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638 (1915)
Q Consensus 559 h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~ 638 (1915)
...+|+.+.|+|.. .+.++++-.+..-.+-++..+.. ..+...... ..+....+..|.+.|++|++|..
T Consensus 105 f~spv~~~q~hp~k---~n~~va~~~~~sp~vi~~s~~~h-~~Lp~d~d~-------dln~sas~~~fdr~g~yIitGts 173 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRK---RNKCVATIMEESPVVIDFSDPKH-SVLPKDDDG-------DLNSSASHGVFDRRGKYIITGTS 173 (405)
T ss_pred ccCccceeeecccc---CCeEEEEEecCCcEEEEecCCce-eeccCCCcc-------ccccccccccccCCCCEEEEecC
Confidence 57899999999954 34444444443344444433210 000000000 01122334578999999999999
Q ss_pred CCeEEEEEecCCCCCceeEEeccCC-CCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 639 DHHVRVYKMDGVDSPLGILEVEEHS-DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 639 Dg~I~IwDl~~~~~~~~i~~l~~h~-~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
.|.+.+++.. +..++..+.-.. ..|..|.|+..|.+|+..+.|..|+.|+++.--.. . ....+........
T Consensus 174 KGkllv~~a~---t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~----~-r~~e~e~~~K~qD 245 (405)
T KOG1273|consen 174 KGKLLVYDAE---TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDE----G-RDGEVEPEHKLQD 245 (405)
T ss_pred cceEEEEecc---hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhccc----C-ccCCcChhHHHHH
Confidence 9999999984 345555554444 78899999999999999999999999988632100 0 0000000011111
Q ss_pred ccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCC-CCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT-NEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~-~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
......-.+++|+.+|.|+++++..-+.++||....|.++..|.|.. .....|.|+| -...|++- ..|+|+||....
T Consensus 246 vVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp-~rp~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 246 VVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHP-VRPIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred HHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeeccccc-ceeeeeec-cCCceEEEEeec
Confidence 22345567899999999999998878899999999999999999988 4678899999 55566665 789999998754
No 115
>KOG2048|consensus
Probab=99.91 E-value=4.2e-21 Score=231.28 Aligned_cols=410 Identities=16% Similarity=0.155 Sum_probs=295.3
Q ss_pred cCccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE--EEeCCCCCE
Q psy9598 444 RSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA--TLRGCSGEI 521 (1915)
Q Consensus 444 ~~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~--~l~gH~~~I 521 (1915)
.+|..+.+.++++.-|+. ..++..+.+..-.++|++++.+|.+..++.|+.||.+..++...+.+.. .|....+.|
T Consensus 80 ~~RLFS~g~sg~i~EwDl--~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRv 157 (691)
T KOG2048|consen 80 GGRLFSSGLSGSITEWDL--HTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRV 157 (691)
T ss_pred CCeEEeecCCceEEEEec--ccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceE
Confidence 688899999999988854 5566777888888999999999999999999999988889988887654 344456899
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEee--------cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEec
Q psy9598 522 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV--------GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593 (1915)
Q Consensus 522 ~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~--------~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl 593 (1915)
.+|+|++++..||+|+.||.|++||+.++..++... +...-|++|.|..+ ..|++|..-|+|++||.
T Consensus 158 Lslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-----~tI~sgDS~G~V~FWd~ 232 (691)
T KOG2048|consen 158 LSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-----STIASGDSAGTVTFWDS 232 (691)
T ss_pred EEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-----CcEEEecCCceEEEEcc
Confidence 999999999999999999999999999998877322 13345888888753 68999999999999999
Q ss_pred ccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCC-CceeEEeccCCCCeeEEEEc
Q psy9598 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS-PLGILEVEEHSDKVDSIQWS 672 (1915)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~-~~~i~~l~~h~~~V~sl~fs 672 (1915)
..+..+.... .|.+.|.|++.+++++.++++|.|+.|..|...+... .........|...|.+++..
T Consensus 233 ~~gTLiqS~~------------~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~ 300 (691)
T KOG2048|consen 233 IFGTLIQSHS------------CHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVI 300 (691)
T ss_pred cCcchhhhhh------------hhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeee
Confidence 8886544433 4578899999999999999999999999998855433 22333456788999999988
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCceE----------------------Eeee-c-------ccccC-----CCCcccccc
Q psy9598 673 HSHLRFVSGSRDGTALIWYYKCSQWR----------------------FIRL-D-------MNTCL-----PHTKETSDE 717 (1915)
Q Consensus 673 pdg~~L~sgs~DG~I~IWDl~~~~~~----------------------~~~~-~-------~~~~~-----~~~~~~~~~ 717 (1915)
++ .|++|+.|+++.+--....... .... . +.... .........
T Consensus 301 ~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~ 378 (691)
T KOG2048|consen 301 EN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLF 378 (691)
T ss_pred cc--eEEecceeeEEEEccccccCchhhhccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeee
Confidence 76 8999999998887654431100 0000 0 00000 000011112
Q ss_pred ccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-----CCCCCeEEEEEccCCCCEEEEEe-cCceEEE
Q psy9598 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-----GHTNEVFVLESHPFDSRVLLSAG-HDGLIII 791 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-----gH~~~V~sl~~sp~dg~~LaSgs-~DG~I~I 791 (1915)
......|.|.+.||+|++|+.+.- ..++||.+.....+.... .-.-.+..+.|+- +++.++.++ .++.+.+
T Consensus 379 ~k~~~nIs~~aiSPdg~~Ia~st~--~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~fti-d~~k~~~~s~~~~~le~ 455 (691)
T KOG2048|consen 379 TKEKENISCAAISPDGNLIAISTV--SRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTI-DKNKLFLVSKNIFSLEE 455 (691)
T ss_pred cCCccceeeeccCCCCCEEEEeec--cceEEEEeccCcceeEEEeccchhhhccceeeEEEe-cCceEEEEecccceeEE
Confidence 233466899999999999998874 567888776533333222 1223466777877 666666666 7888888
Q ss_pred EECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccC------CCceeec-CCCCe
Q psy9598 792 WDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNI------PRELFFH-TDYRT 864 (1915)
Q Consensus 792 Wdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l------~~~~~F~-~d~~~ 864 (1915)
+++.+.....+..+. .......|..++.|++|++||+.+..|.|.+|++.+.+..... ...+.|+ .+...
T Consensus 456 ~el~~ps~kel~~~~---~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~ 532 (691)
T KOG2048|consen 456 FELETPSFKELKSIQ---SQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNR 532 (691)
T ss_pred EEecCcchhhhhccc---cccCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhccCcceeeeeccccccCc
Confidence 888776553233332 2234578999999999999999999999999999987643332 1256777 44444
Q ss_pred ee-ecCCCccceeeccc
Q psy9598 865 LN-RPNGLFEPTYDEVT 880 (1915)
Q Consensus 865 Lv-~~~~~~~~v~D~~t 880 (1915)
|+ ..+++-+--+|+..
T Consensus 533 lvvats~nQv~efdi~~ 549 (691)
T KOG2048|consen 533 LVVATSNNQVFEFDIEA 549 (691)
T ss_pred EEEEecCCeEEEEecch
Confidence 44 34444434677743
No 116
>KOG0301|consensus
Probab=99.91 E-value=1.8e-22 Score=243.01 Aligned_cols=285 Identities=19% Similarity=0.313 Sum_probs=233.2
Q ss_pred CCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce--EEEeecCCCCeEE-EEeccCccCCCcEEEEEe
Q psy9598 507 DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP--ISVLVGHQGIITG-VNFCPLEVNGFNYLASTS 583 (1915)
Q Consensus 507 tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~--~~~l~~h~~~V~s-l~fsp~~~~d~~~L~sgs 583 (1915)
..++.+.+.||...|..+++.+. ..++++|.||+++||+-..... .+.+.+|.+.|.+ ++|.+. ++..|++|+
T Consensus 3 ~Y~ls~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~---~~~~l~~g~ 78 (745)
T KOG0301|consen 3 QYKLSHELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAES---DKGRLVVGG 78 (745)
T ss_pred cceeEEEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccc---cCcceEeec
Confidence 34677889999999998887655 4899999999999999865543 3567788888887 888872 556799999
Q ss_pred CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC
Q psy9598 584 TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663 (1915)
Q Consensus 584 ~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~ 663 (1915)
.|++|.+|...+...+. .+.+|...|+|++...++. |++|+.|.++++|-.. .+...+.+|.
T Consensus 79 ~D~~i~v~~~~~~~P~~------------~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~-----~l~~~l~gH~ 140 (745)
T KOG0301|consen 79 MDTTIIVFKLSQAEPLY------------TLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG-----ELVYSLQGHT 140 (745)
T ss_pred ccceEEEEecCCCCchh------------hhhccccceeeeecCCcCc-eEecccccceEEecch-----hhhcccCCcc
Confidence 99999999887764332 3446789999999888887 9999999999999873 3445589999
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecC
Q psy9598 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 743 (1915)
Q Consensus 664 ~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~D 743 (1915)
..|+++++-|.+ .++|||.|.+|++|.-.+ ......+|...|..+++-+++.+ +++++ |
T Consensus 141 asVWAv~~l~e~-~~vTgsaDKtIklWk~~~------------------~l~tf~gHtD~VRgL~vl~~~~f-lScsN-D 199 (745)
T KOG0301|consen 141 ASVWAVASLPEN-TYVTGSADKTIKLWKGGT------------------LLKTFSGHTDCVRGLAVLDDSHF-LSCSN-D 199 (745)
T ss_pred hheeeeeecCCC-cEEeccCcceeeeccCCc------------------hhhhhccchhheeeeEEecCCCe-EeecC-C
Confidence 999999999888 899999999999995421 22345679999999999887655 55666 9
Q ss_pred CeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEc
Q psy9598 744 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWS 823 (1915)
Q Consensus 744 g~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafS 823 (1915)
|.|++|++ +|.++..+.||++.|+++.... ++..++|+|.|++++||+.. .+ .+.+. .....|+++.+-
T Consensus 200 g~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~-~~~~Ivs~gEDrtlriW~~~--e~--~q~I~-----lPttsiWsa~~L 268 (745)
T KOG0301|consen 200 GSIRLWDL-DGEVLLEMHGHTNFVYSISMAL-SDGLIVSTGEDRTLRIWKKD--EC--VQVIT-----LPTTSIWSAKVL 268 (745)
T ss_pred ceEEEEec-cCceeeeeeccceEEEEEEecC-CCCeEEEecCCceEEEeecC--ce--EEEEe-----cCccceEEEEEe
Confidence 99999999 8999999999999999999666 78899999999999999987 44 44433 223479999988
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCC
Q psy9598 824 PDGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 824 pdg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
++|. |++|++||.|+||.....
T Consensus 269 ~NgD-Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 269 LNGD-IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred eCCC-EEEeccCceEEEEEeccc
Confidence 8877 788999999999987743
No 117
>KOG0300|consensus
Probab=99.91 E-value=5.9e-23 Score=225.20 Aligned_cols=321 Identities=17% Similarity=0.240 Sum_probs=250.7
Q ss_pred EEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEecc
Q psy9598 491 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570 (1915)
Q Consensus 491 LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp 570 (1915)
|++.-.+++++ ..++..|.||...|..++.......+.+++.|.+.+||.+++|.|+..+.||.+.|++|.|++
T Consensus 127 ivssFk~~t~~------~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~ 200 (481)
T KOG0300|consen 127 IVSSFKDGTVK------FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHN 200 (481)
T ss_pred heeeecCCcee------EeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEecc
Confidence 44444555532 245677899999999999988888999999999999999999999999999999999999999
Q ss_pred CccCCCcEEEEEeCCCeEEEEecccCccccc----e------------------------eccCccccccccCCCCCceE
Q psy9598 571 LEVNGFNYLASTSTDGCIGFWKYKLDIDISK----T------------------------VFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 571 ~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~----~------------------------~~~~~~~~~~~~~~~~~~V~ 622 (1915)
. +.++++++.|++..||...-.-.+.. . ..+..-.....+.+|.+.|.
T Consensus 201 s----~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~ 276 (481)
T KOG0300|consen 201 S----GLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVS 276 (481)
T ss_pred c----cceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceE
Confidence 5 48999999999999997321100000 0 00000111234567889999
Q ss_pred EEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 623 ~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
|+.|...|..+++++.|.+..+||+ .....+..+.||....+.++-+|..+++++++.|.+.++||++..-
T Consensus 277 a~dWL~gg~Q~vTaSWDRTAnlwDV---Etge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI------ 347 (481)
T KOG0300|consen 277 ACDWLAGGQQMVTASWDRTANLWDV---ETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAI------ 347 (481)
T ss_pred ehhhhcCcceeeeeeccccceeeee---ccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhc------
Confidence 9999999999999999999999999 5566778899999999999999999999999999999999998322
Q ss_pred cccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC-ceEEEeeCCCCCeEEEEEccCCCCEEE
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG-DLVQVLKGHTNEVFVLESHPFDSRVLL 781 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg-~~i~~l~gH~~~V~sl~~sp~dg~~La 781 (1915)
.....+.+|...|+++.|..+.+ +++++. |.+|+|||+++. .++.++. -.++++.++++- .+.+|+
T Consensus 348 ---------~sV~VFQGHtdtVTS~vF~~dd~-vVSgSD-DrTvKvWdLrNMRsplATIR-tdS~~NRvavs~-g~~iIA 414 (481)
T KOG0300|consen 348 ---------QSVAVFQGHTDTVTSVVFNTDDR-VVSGSD-DRTVKVWDLRNMRSPLATIR-TDSPANRVAVSK-GHPIIA 414 (481)
T ss_pred ---------ceeeeecccccceeEEEEecCCc-eeecCC-CceEEEeeeccccCcceeee-cCCccceeEeec-CCceEE
Confidence 12234567889999999987664 566666 999999999875 4566665 456789999987 667888
Q ss_pred EEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCC--CEEEEEeCCCeEEEEeCCCC
Q psy9598 782 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDG--TTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 782 Sgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg--~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
.--.+..|+|||+..... ..+.......|...|.|++|..+. .-|++|+-|..+.-|.+...
T Consensus 415 iPhDNRqvRlfDlnG~Rl---aRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 415 IPHDNRQVRLFDLNGNRL---ARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred eccCCceEEEEecCCCcc---ccCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 888889999999976554 333333334566789999997653 45788889999999988753
No 118
>KOG1063|consensus
Probab=99.90 E-value=1.1e-21 Score=235.82 Aligned_cols=404 Identities=19% Similarity=0.242 Sum_probs=290.7
Q ss_pred ccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-----------------
Q psy9598 446 REYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG----------------- 508 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg----------------- 508 (1915)
-.++|+.|+.+.+|...+..+....++.||...+.|+.-- -..+.+.+.|++|.+|+....
T Consensus 71 ~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~--~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ip 148 (764)
T KOG1063|consen 71 EMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVAR--SSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIP 148 (764)
T ss_pred eEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEee--eeEEEeeccCceEEEeecCCCceeeehheehhhhhHhh
Confidence 4578999999999999888899999999987776666432 223333367888888886211
Q ss_pred ---------------------------------cEEEEEeCCCCCEEEEEEeCCC---CEEEEEeCCCcEEEEECCCCc-
Q psy9598 509 ---------------------------------KLLATLRGCSGEISDIAIDNRN---ILLAAGTVDKTIRIWNLQTLA- 551 (1915)
Q Consensus 509 ---------------------------------~~~~~l~gH~~~I~~Lafspdg---~~LaSgs~DgtIrVWDl~tg~- 551 (1915)
..+..+.||...|.+|+|..-+ .+|||||.|..||||.+.-+.
T Consensus 149 LcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~ 228 (764)
T KOG1063|consen 149 LCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDD 228 (764)
T ss_pred HHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCC
Confidence 2345678999999999997754 489999999999999874211
Q ss_pred --------------------eE----------EEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccc
Q psy9598 552 --------------------PI----------SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601 (1915)
Q Consensus 552 --------------------~~----------~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~ 601 (1915)
.. ..+.||.+.|.++.|+|.. ..|+++|.|.++.+|.-.....+..
T Consensus 229 ~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~----~~LLSASaDksmiiW~pd~~tGiWv 304 (764)
T KOG1063|consen 229 EDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEG----LDLLSASADKSMIIWKPDENTGIWV 304 (764)
T ss_pred ccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccch----hhheecccCcceEEEecCCccceEE
Confidence 11 1234899999999999954 7899999999999998776544433
Q ss_pred eeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE
Q psy9598 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 681 (1915)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg 681 (1915)
..... ....+..+..+.+.|+|+++.+++-+..|..++|.............+.||...|..|+|+|.|.+|++.
T Consensus 305 ~~vRl-----Ge~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsv 379 (764)
T KOG1063|consen 305 DVVRL-----GEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSV 379 (764)
T ss_pred EEEEe-----ecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEe
Confidence 32220 0111233567899999999999999999999999843333344455678999999999999999999999
Q ss_pred eCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC---------
Q psy9598 682 SRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF--------- 752 (1915)
Q Consensus 682 s~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~--------- 752 (1915)
|.|.+-|||-.-..+.. .........|...++|++|-+....+++|.. ...+++|+..
T Consensus 380 s~DQTTRlFa~wg~q~~------------wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAd-EKVlRvF~aPk~fv~~l~~ 446 (764)
T KOG1063|consen 380 SLDQTTRLFARWGRQQE------------WHEIARPQIHGYDLTCLSFVNEDLQFVSGAD-EKVLRVFEAPKSFVKSLMA 446 (764)
T ss_pred ccccceeeecccccccc------------eeeecccccccccceeeehccCCceeeeccc-ceeeeeecCcHHHHHHHHH
Confidence 99999999854311100 0111122347778888888875444444444 7778888641
Q ss_pred ----------------------------------CCc---------------------------------eEEEeeCCCC
Q psy9598 753 ----------------------------------NGD---------------------------------LVQVLKGHTN 765 (1915)
Q Consensus 753 ----------------------------------tg~---------------------------------~i~~l~gH~~ 765 (1915)
+|. .++.+.||..
T Consensus 447 i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGy 526 (764)
T KOG1063|consen 447 ICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGY 526 (764)
T ss_pred HhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCce
Confidence 000 0123568999
Q ss_pred CeEEEEEccCCCCEEEEEecC-----ceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy9598 766 EVFVLESHPFDSRVLLSAGHD-----GLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLV 840 (1915)
Q Consensus 766 ~V~sl~~sp~dg~~LaSgs~D-----G~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~I 840 (1915)
.|++++.+| +++++||++.. ..|+||+..+-.. ...+. .|.-.|+.++|||||++|++.+.|.++.+
T Consensus 527 Ev~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~W~~--~~~L~-----~HsLTVT~l~FSpdg~~LLsvsRDRt~sl 598 (764)
T KOG1063|consen 527 EVYALAISP-TGNLIASACKSSLKEHAVIRLWNTANWLQ--VQELE-----GHSLTVTRLAFSPDGRYLLSVSRDRTVSL 598 (764)
T ss_pred eEEEEEecC-CCCEEeehhhhCCccceEEEEEeccchhh--hheec-----ccceEEEEEEECCCCcEEEEeecCceEEe
Confidence 999999999 99999999754 4699999987666 44343 45668999999999999999999999999
Q ss_pred EeCCCCc----------ccccCCCceeecCCCCeeeecC-CCccceeecccC
Q psy9598 841 YGLGGFK----------RPQNIPRELFFHTDYRTLNRPN-GLFEPTYDEVTN 881 (1915)
Q Consensus 841 wdl~s~~----------~~~~l~~~~~F~~d~~~Lv~~~-~~~~~v~D~~t~ 881 (1915)
|...... ....|.-...|++|...++..+ .-.+.||-+...
T Consensus 599 ~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 599 YEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred eeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 9876432 2222333567788888766443 344668876543
No 119
>cd05497 Bromo_Brdt_I_like Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.90 E-value=4.7e-24 Score=212.83 Aligned_cols=101 Identities=33% Similarity=0.596 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCC--CCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcC
Q psy9598 117 NWKNECREVLETLWVCPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~~~~F~~pvd~--~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~ 194 (1915)
.++-.++.||..|++++.|+||++|||. .++||||+|||+||||+||++||+++.|.++++|.+||+|||.||+.||+
T Consensus 5 q~~~~~~~il~~l~~~~~s~~F~~PVd~~~~~~pdY~~iIk~PmDL~tI~~kL~~~~Y~s~~ef~~D~~li~~Na~~yN~ 84 (107)
T cd05497 5 QLQYLLKVVLKALWKHKFAWPFQQPVDAVKLNLPDYHKIIKTPMDLGTIKKRLENNYYWSASECIQDFNTMFTNCYIYNK 84 (107)
T ss_pred HHHHHHHHHHHHHHhCCcCccccCCCCcccccCCcHHHHHcCcccHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 4555567899999999999999999994 48999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 195 NKRSKIYIMTTRLSEFAEEHLRRL 218 (1915)
Q Consensus 195 ~~~s~i~~~a~~l~~~f~~~~~~~ 218 (1915)
++ |.||.+|..|+++|+++++.+
T Consensus 85 ~~-s~i~~~A~~l~~~f~~~l~~~ 107 (107)
T cd05497 85 PG-DDVVLMAQTLEKLFLQKLAQM 107 (107)
T ss_pred CC-CHHHHHHHHHHHHHHHHHHcC
Confidence 77 999999999999999998753
No 120
>KOG1036|consensus
Probab=99.90 E-value=3.8e-22 Score=221.33 Aligned_cols=282 Identities=17% Similarity=0.241 Sum_probs=223.6
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEE
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~ 555 (1915)
...|.+|.|+|.+..|++++.||++++|++....+...+. |.++|++++|.++ ..+++|+.||.|+++|+.++.. ..
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~-~~ 89 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE-DQ 89 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc-ee
Confidence 5789999999999999999999999999998886666665 8999999999874 5789999999999999998764 44
Q ss_pred eecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEE
Q psy9598 556 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLAT 635 (1915)
Q Consensus 556 l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Las 635 (1915)
+..|...|.||.+++.. ..+++||+|++|++||.+.......... ...|+|+..+ |+.|++
T Consensus 90 igth~~~i~ci~~~~~~----~~vIsgsWD~~ik~wD~R~~~~~~~~d~-------------~kkVy~~~v~--g~~LvV 150 (323)
T KOG1036|consen 90 IGTHDEGIRCIEYSYEV----GCVISGSWDKTIKFWDPRNKVVVGTFDQ-------------GKKVYCMDVS--GNRLVV 150 (323)
T ss_pred eccCCCceEEEEeeccC----CeEEEcccCccEEEEecccccccccccc-------------CceEEEEecc--CCEEEE
Confidence 56799999999999843 8999999999999999987433222221 2478887764 668999
Q ss_pred EeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccc
Q psy9598 636 GSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETS 715 (1915)
Q Consensus 636 gs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~ 715 (1915)
|+.+..|.+||++....+... .-....-.+.||++.|++.-++++|.||.|.+=.+......... .-....+....
T Consensus 151 g~~~r~v~iyDLRn~~~~~q~-reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~sk---kyaFkCHr~~~ 226 (323)
T KOG1036|consen 151 GTSDRKVLIYDLRNLDEPFQR-RESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSK---KYAFKCHRLSE 226 (323)
T ss_pred eecCceEEEEEcccccchhhh-ccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhh---ceeEEeeeccc
Confidence 999999999999766554422 22344567899999999999999999999988766654211000 00011112222
Q ss_pred ccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEec
Q psy9598 716 DETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 716 ~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~ 785 (1915)
.......+|++++|+|-...+++|++ ||.|.+||+.+.+.+..|..-...|.+++|+. +|..||+|+.
T Consensus 227 ~~~~~~yPVNai~Fhp~~~tfaTgGs-DG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~-dG~~LAia~s 294 (323)
T KOG1036|consen 227 KDTEIIYPVNAIAFHPIHGTFATGGS-DGIVNIWDLFNRKRLKQLAKYETSISSLSFSM-DGSLLAIASS 294 (323)
T ss_pred CCceEEEEeceeEeccccceEEecCC-CceEEEccCcchhhhhhccCCCCceEEEEecc-CCCeEEEEec
Confidence 33345578999999999999999999 99999999999999999988878899999998 9999999874
No 121
>cd05510 Bromo_SPT7_like Bromodomain; SPT7_like subfamily. SPT7 is a yeast protein that functions as a component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA, and SLIK. SAGA is involved in the RNA polymerase II-dependent transcriptional regulation of about 10% of all yeast genes. The SPT7 bromodomain has been shown to weakly interact with acetylated histone H3, but not H4. The human representative of this subfamily is cat eye syndrome critical region protein 2 (CECR2). Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.90 E-value=5.8e-24 Score=213.15 Aligned_cols=106 Identities=28% Similarity=0.442 Sum_probs=100.1
Q ss_pred CchhHHHHHHHHHHHHhcC-CCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhh
Q psy9598 114 RPFNWKNECREVLETLWVC-PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192 (1915)
Q Consensus 114 ~~~~~~~~~~~il~~l~~~-~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~y 192 (1915)
...++.+.|..||+.|+++ +.++||+.||++.++||||++|++||||+||++||+++.|.|+++|.+||+|||.||+.|
T Consensus 4 ~~~~~~~~~~~il~~l~~~~~~s~~F~~pv~~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~s~~ef~~D~~Li~~N~~~y 83 (112)
T cd05510 4 GQEEFYESLDKVLNELKTYTEHSTPFLTKVSKREAPDYYDIIKKPMDLGTMLKKLKNLQYKSKAEFVDDLNLIWKNCLLY 83 (112)
T ss_pred cHHHHHHHHHHHHHHHHhcCccccchhcCCChhhcCCHHHHhcCccCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3468899999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 193 NQNKRSKIYIMTTRLSEFAEEHLRRLT 219 (1915)
Q Consensus 193 N~~~~s~i~~~a~~l~~~f~~~~~~~~ 219 (1915)
|+++.+.++++|..|++.|++++..+.
T Consensus 84 N~~~s~~~~~~A~~l~~~~~~~~~~~~ 110 (112)
T cd05510 84 NSDPSHPLRRHANFMKKKAEHLLKLIP 110 (112)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 997756889999999999999998763
No 122
>KOG0294|consensus
Probab=99.90 E-value=6.3e-22 Score=219.22 Aligned_cols=269 Identities=22% Similarity=0.319 Sum_probs=208.8
Q ss_pred EEEEECCCcEEEEECC------------CCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeec
Q psy9598 491 IVTGADDLLIKLWRAR------------DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVG 558 (1915)
Q Consensus 491 LaTGs~Dg~I~IWd~~------------tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~ 558 (1915)
|++|+....|.-+++. +..++..+..|.++|++|+++ +.++||||.|-+|+|||+.+...+..+..
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~ 81 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLS 81 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceec
Confidence 5556665555555442 123456778999999999985 77999999999999999999999999999
Q ss_pred CCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC
Q psy9598 559 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638 (1915)
Q Consensus 559 h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~ 638 (1915)
|.+.|+++.|.+.. ....|++|+.||.|.+|+...-..+ ..+.+|.+.|+.++++|.|++.++.+.
T Consensus 82 HagsitaL~F~~~~--S~shLlS~sdDG~i~iw~~~~W~~~------------~slK~H~~~Vt~lsiHPS~KLALsVg~ 147 (362)
T KOG0294|consen 82 HAGSITALKFYPPL--SKSHLLSGSDDGHIIIWRVGSWELL------------KSLKAHKGQVTDLSIHPSGKLALSVGG 147 (362)
T ss_pred cccceEEEEecCCc--chhheeeecCCCcEEEEEcCCeEEe------------eeecccccccceeEecCCCceEEEEcC
Confidence 99999999999854 3358999999999999998765432 234567788999999999999999999
Q ss_pred CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccc
Q psy9598 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDET 718 (1915)
Q Consensus 639 Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (1915)
|+.+++|++-.+... .+..+ ...-+.|.|+|.|.+|+.++.++ |-||.+.+..... ..
T Consensus 148 D~~lr~WNLV~Gr~a-~v~~L---~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~-----------------~i 205 (362)
T KOG0294|consen 148 DQVLRTWNLVRGRVA-FVLNL---KNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFR-----------------EI 205 (362)
T ss_pred CceeeeehhhcCccc-eeecc---CCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhh-----------------hh
Confidence 999999999443322 22222 22234489999999999988764 7788776544211 11
Q ss_pred cccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEc-cCCCCEEEEEecCceEEEEECCCC
Q psy9598 719 NKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESH-PFDSRVLLSAGHDGLIIIWDILSS 797 (1915)
Q Consensus 719 ~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~s-p~dg~~LaSgs~DG~I~IWdl~s~ 797 (1915)
.....+.|+.|. ++..|++|+. |+.|.+||..+..+...+.+|...|-++.+- ...+.+|+|+|.||.|+|||+...
T Consensus 206 ~~~~r~l~~~~l-~~~~L~vG~d-~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 206 ENPKRILCATFL-DGSELLVGGD-NEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred hccccceeeeec-CCceEEEecC-CceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 122446666664 5678888888 9999999999999999999999999999843 226789999999999999999876
Q ss_pred cc
Q psy9598 798 KQ 799 (1915)
Q Consensus 798 ~~ 799 (1915)
..
T Consensus 284 ~k 285 (362)
T KOG0294|consen 284 TK 285 (362)
T ss_pred cc
Confidence 43
No 123
>KOG0641|consensus
Probab=99.90 E-value=1.3e-21 Score=205.95 Aligned_cols=261 Identities=20% Similarity=0.239 Sum_probs=208.3
Q ss_pred eeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcE-----EEEEeCCCCCEEEEEEeCC----CCEEEEE
Q psy9598 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL-----LATLRGCSGEISDIAIDNR----NILLAAG 536 (1915)
Q Consensus 466 ~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~-----~~~l~gH~~~I~~Lafspd----g~~LaSg 536 (1915)
..+..+-..|.++|+|++|+|+|.+||||+.|.+|++.-.....+ -..|.-|.+.|..|+|-.+ +.+|+++
T Consensus 79 ~v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~ 158 (350)
T KOG0641|consen 79 SVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASA 158 (350)
T ss_pred eEEeeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEec
Confidence 334456678999999999999999999999999999975543222 2356779999999999653 5678887
Q ss_pred e-CCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccC
Q psy9598 537 T-VDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 615 (1915)
Q Consensus 537 s-~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~ 615 (1915)
+ .|..|.+-|..+|+..+.+.||++.|.++--. ++-++++|++|.+|++||++-..++..+...... -.
T Consensus 159 gagdc~iy~tdc~~g~~~~a~sghtghilalysw-----n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~-----~g 228 (350)
T KOG0641|consen 159 GAGDCKIYITDCGRGQGFHALSGHTGHILALYSW-----NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHD-----GG 228 (350)
T ss_pred CCCcceEEEeecCCCCcceeecCCcccEEEEEEe-----cCcEEEccCCCceEEEEeeeccceeeeccCcccC-----CC
Confidence 6 47788888999999999999999999887432 3479999999999999999988765544322100 00
Q ss_pred CCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy9598 616 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 616 ~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~ 695 (1915)
-....|.++++.|.|++|++|..|....+||+++ ...+..+..|+..|.|+.|+|...++++|+.|..|++-|++..
T Consensus 229 lessavaav~vdpsgrll~sg~~dssc~lydirg---~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 229 LESSAVAAVAVDPSGRLLASGHADSSCMLYDIRG---GRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred cccceeEEEEECCCcceeeeccCCCceEEEEeeC---CceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccc
Confidence 1236799999999999999999999999999954 4567788999999999999999999999999999999998754
Q ss_pred ceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 696 QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
-. ..........|...+..+.|+|..-.+++++. |.++.+|-+.
T Consensus 306 la------------~el~~~vv~ehkdk~i~~rwh~~d~sfisssa-dkt~tlwa~~ 349 (350)
T KOG0641|consen 306 LA------------HELPIMVVAEHKDKAIQCRWHPQDFSFISSSA-DKTATLWALN 349 (350)
T ss_pred hh------------hcCceEEEEeccCceEEEEecCccceeeeccC-cceEEEeccC
Confidence 21 11112233457788889999999988888887 9999999763
No 124
>KOG1036|consensus
Probab=99.90 E-value=8.6e-22 Score=218.55 Aligned_cols=269 Identities=18% Similarity=0.244 Sum_probs=216.7
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI 597 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~ 597 (1915)
...|++|.|+|.+..|+++++||++++||+........+ .|..++.+++|.+. ..+++|+.||.|+.+|+.++.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d~-----~~~~~G~~dg~vr~~Dln~~~ 86 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFADE-----STIVTGGLDGQVRRYDLNTGN 86 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccCC-----ceEEEeccCceEEEEEecCCc
Confidence 567999999999999999999999999999887555555 48999999999873 689999999999999999875
Q ss_pred cccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCE
Q psy9598 598 DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 677 (1915)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~ 677 (1915)
. ..+..|...|.|+.+++....+++|+.|++|++||.+. ......+. ....|.++.. .|+.
T Consensus 87 ~-------------~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~---~~~~~~~d-~~kkVy~~~v--~g~~ 147 (323)
T KOG1036|consen 87 E-------------DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN---KVVVGTFD-QGKKVYCMDV--SGNR 147 (323)
T ss_pred c-------------eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccc---cccccccc-cCceEEEEec--cCCE
Confidence 3 12335778999999999888999999999999999853 12222222 2347887765 4779
Q ss_pred EEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC---
Q psy9598 678 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG--- 754 (1915)
Q Consensus 678 L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg--- 754 (1915)
|++|+.|..|.+||+++..... ..........+.||++-|++.-.++++- +|.|.+=.+...
T Consensus 148 LvVg~~~r~v~iyDLRn~~~~~--------------q~reS~lkyqtR~v~~~pn~eGy~~sSi-eGRVavE~~d~s~~~ 212 (323)
T KOG1036|consen 148 LVVGTSDRKVLIYDLRNLDEPF--------------QRRESSLKYQTRCVALVPNGEGYVVSSI-EGRVAVEYFDDSEEA 212 (323)
T ss_pred EEEeecCceEEEEEcccccchh--------------hhccccceeEEEEEEEecCCCceEEEee-cceEEEEccCCchHH
Confidence 9999999999999999765211 1223446678999999998887787777 999998776655
Q ss_pred -ceEEEeeCCCC---------CeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 755 -DLVQVLKGHTN---------EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 755 -~~i~~l~gH~~---------~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
..-..|+.|.. +|++|+||| -...|||||.||.|.+||+.+.+. +..+. .....|.+++|+.
T Consensus 213 ~skkyaFkCHr~~~~~~~~~yPVNai~Fhp-~~~tfaTgGsDG~V~~Wd~~~rKr--l~q~~-----~~~~SI~slsfs~ 284 (323)
T KOG1036|consen 213 QSKKYAFKCHRLSEKDTEIIYPVNAIAFHP-IHGTFATGGSDGIVNIWDLFNRKR--LKQLA-----KYETSISSLSFSM 284 (323)
T ss_pred hhhceeEEeeecccCCceEEEEeceeEecc-ccceEEecCCCceEEEccCcchhh--hhhcc-----CCCCceEEEEecc
Confidence 44556777753 799999999 677899999999999999998877 66665 2346799999999
Q ss_pred CCCEEEEEeC
Q psy9598 825 DGTTCALTDS 834 (1915)
Q Consensus 825 dg~~Lasg~~ 834 (1915)
||..||++++
T Consensus 285 dG~~LAia~s 294 (323)
T KOG1036|consen 285 DGSLLAIASS 294 (323)
T ss_pred CCCeEEEEec
Confidence 9999999986
No 125
>KOG0305|consensus
Probab=99.90 E-value=5.7e-22 Score=241.48 Aligned_cols=280 Identities=18% Similarity=0.234 Sum_probs=225.0
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccc
Q psy9598 522 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601 (1915)
Q Consensus 522 ~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~ 601 (1915)
+-|.|+. .+.||.|. ...|.+|+..++........+...|+++.|++ +|.+|++|..+|.|.|||......+..
T Consensus 181 nlldWss-~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~----~G~~LavG~~~g~v~iwD~~~~k~~~~ 254 (484)
T KOG0305|consen 181 NLLDWSS-ANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSP----DGSHLAVGTSDGTVQIWDVKEQKKTRT 254 (484)
T ss_pred hHhhccc-CCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECC----CCCEEEEeecCCeEEEEehhhcccccc
Confidence 3467884 44666665 45799999999987666666689999999999 459999999999999999887765444
Q ss_pred eeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE
Q psy9598 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 681 (1915)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg 681 (1915)
+... |...|-|++|+ +..+.+|+.+|.|.++|++....... .+.+|...|..+.|++++.+|++|
T Consensus 255 ~~~~-----------h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~--~~~~H~qeVCgLkws~d~~~lASG 319 (484)
T KOG0305|consen 255 LRGS-----------HASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS--TLQGHRQEVCGLKWSPDGNQLASG 319 (484)
T ss_pred ccCC-----------cCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhh--hhhcccceeeeeEECCCCCeeccC
Confidence 4331 67889999998 66899999999999999965443332 478999999999999999999999
Q ss_pred eCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCC-CEEEEEE-ecCCeEEEEECCCCceEEE
Q psy9598 682 SRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD-RWVITAI-NFNFQIKIWDAFNGDLVQV 759 (1915)
Q Consensus 682 s~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg-~~L~t~s-~~Dg~I~vwD~~tg~~i~~ 759 (1915)
+.|+.+.|||....... .....|...|.+++|+|-. ..||+|+ ..|++|++||..+|..+..
T Consensus 320 gnDN~~~Iwd~~~~~p~----------------~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 320 GNDNVVFIWDGLSPEPK----------------FTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDS 383 (484)
T ss_pred CCccceEeccCCCcccc----------------EEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecc
Confidence 99999999998544322 2345688999999999964 4455543 3599999999999999998
Q ss_pred eeCCCCCeEEEEEccCCCCEEEEEe-cCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeE
Q psy9598 760 LKGHTNEVFVLESHPFDSRVLLSAG-HDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHL 838 (1915)
Q Consensus 760 l~gH~~~V~sl~~sp~dg~~LaSgs-~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I 838 (1915)
+... +.|..|.|++....++.+.| .++.|.||+..+.+. +..+. .|...|..+++||||..|++|+.|.++
T Consensus 384 vdtg-sQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~--~~~l~-----gH~~RVl~la~SPdg~~i~t~a~DETl 455 (484)
T KOG0305|consen 384 VDTG-SQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKL--VAELL-----GHTSRVLYLALSPDGETIVTGAADETL 455 (484)
T ss_pred cccC-CceeeEEEcCCCCEEEEecCCCCCcEEEEeccccce--eeeec-----CCcceeEEEEECCCCCEEEEecccCcE
Confidence 8644 46999999994444555544 477999999988666 55444 677889999999999999999999999
Q ss_pred EEEeCCCC
Q psy9598 839 LVYGLGGF 846 (1915)
Q Consensus 839 ~Iwdl~s~ 846 (1915)
++|++-..
T Consensus 456 rfw~~f~~ 463 (484)
T KOG0305|consen 456 RFWNLFDE 463 (484)
T ss_pred EeccccCC
Confidence 99998764
No 126
>cd05504 Bromo_Acf1_like Bromodomain; Acf1_like or BAZ1A_like subfamily. Bromo adjacent to zinc finger 1A (BAZ1A) was identified as a novel human bromodomain gene by cDNA library screening. The Drosophila homologue, Acf1, is part of the CHRAC (chromatin accessibility complex) and regulates ISWI-induced nucleosome remodeling. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.90 E-value=1.4e-23 Score=212.26 Aligned_cols=103 Identities=35% Similarity=0.542 Sum_probs=98.6
Q ss_pred chhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcC
Q psy9598 115 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194 (1915)
Q Consensus 115 ~~~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~ 194 (1915)
.......|..||+.|++++.++||..|||..++||||++|++||||+||++||+++.|.|+++|..||+|||.||++||+
T Consensus 10 ~~~~~~~c~~il~~l~~~~~s~~F~~pvd~~~~pdY~~vI~~PmDL~tI~~kL~~~~Y~s~~~f~~Dv~LI~~Na~~yN~ 89 (115)
T cd05504 10 GPLNLSALEQLLVEIVKHKDSWPFLRPVSKIEVPDYYDIIKKPMDLGTIKEKLNMGEYKLAEEFLSDIQLVFSNCFLYNP 89 (115)
T ss_pred CHHHHHHHHHHHHHHHhCCCchhhcCCCCccccccHHHHhcCcccHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 34556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 195 NKRSKIYIMTTRLSEFAEEHLRRL 218 (1915)
Q Consensus 195 ~~~s~i~~~a~~l~~~f~~~~~~~ 218 (1915)
++ |.+|.+|..|+++|+++++.+
T Consensus 90 ~~-s~i~~~A~~l~~~f~~~~~~~ 112 (115)
T cd05504 90 EH-TSVYKAGTRLQRFFIKRCRKL 112 (115)
T ss_pred CC-CHHHHHHHHHHHHHHHHHHHh
Confidence 77 999999999999999999886
No 127
>cd05501 Bromo_SP100C_like Bromodomain, SP100C_like subfamily. The SP100C protein is a splice variant of SP100, a major component of PML-SP100 nuclear bodies (NBs), which are poorly understood. It is covalently modified by SUMO-1 and may play a role in processes at the chromatin level. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.90 E-value=1.8e-23 Score=203.36 Aligned_cols=98 Identities=20% Similarity=0.328 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCC
Q psy9598 119 KNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRS 198 (1915)
Q Consensus 119 ~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s 198 (1915)
.+.|+.||.+|++++.|++|..+ ..++||||+|||+||||+||++||.+++|.|+++|.+||+|||+||++||+++
T Consensus 4 l~~ce~il~~l~~~~~s~~f~~~--p~~~pdY~~iIk~PMDL~tI~~kL~~~~Y~s~~ef~~D~~Lif~N~~~yN~~~-- 79 (102)
T cd05501 4 LLKCEFLLLKVYCMSKSGFFISK--PYYIRDYCQGIKEPMWLNKVKERLNERVYHTVEGFVRDMRLIFHNHKLFYKDD-- 79 (102)
T ss_pred HHHHHHHHHHHHhCcccccccCC--CCCCCchHHHcCCCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHcCCC--
Confidence 35699999999999999999764 35899999999999999999999999999999999999999999999999954
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy9598 199 KIYIMTTRLSEFAEEHLRRLTV 220 (1915)
Q Consensus 199 ~i~~~a~~l~~~f~~~~~~~~~ 220 (1915)
.++.+|..|++.|+++|+.+.+
T Consensus 80 ~~~~~a~~L~~~Fek~~~~~f~ 101 (102)
T cd05501 80 DFGQVGITLEKKFEKNFKEVFA 101 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999998753
No 128
>cd05507 Bromo_brd8_like Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be a nuclear receptor coactivator. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.90 E-value=1.2e-23 Score=209.56 Aligned_cols=101 Identities=29% Similarity=0.491 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q psy9598 117 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~ 196 (1915)
.|++.|..||+.|++|+.++||.+||+...+||||++|++||||+||++||+++.|.++++|.+||+|||.||+.||+++
T Consensus 3 ~~~~~~~~il~~l~~~~~a~~F~~pV~~~~~p~Y~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~~ 82 (104)
T cd05507 3 AWKKAILLVYRTLASHRYASVFLKPVTEDIAPGYHSVVYRPMDLSTIKKNIENGTIRSTAEFQRDVLLMFQNAIMYNSSD 82 (104)
T ss_pred HHHHHHHHHHHHHHcCCCCHhhcCCCCccccCCHHHHhCCCcCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q psy9598 197 RSKIYIMTTRLSEFAEEHLRRL 218 (1915)
Q Consensus 197 ~s~i~~~a~~l~~~f~~~~~~~ 218 (1915)
+.+|.+|..|++.|.+++..+
T Consensus 83 -s~v~~~A~~l~~~~~~~~~~~ 103 (104)
T cd05507 83 -HDVYLMAVEMQREVMSQIQQL 103 (104)
T ss_pred -CHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999888654
No 129
>cd05503 Bromo_BAZ2A_B_like Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting protein 5) and hWALp3. The proteins may play roles in transcriptional regulation. Human Tip5 is part of a complex termed NoRC (nucleolar remodeling complex), which induces nucleosome sliding and may play a role in the regulation of the rDNA locus. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.90 E-value=1.1e-23 Score=207.49 Aligned_cols=96 Identities=31% Similarity=0.565 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCC
Q psy9598 119 KNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRS 198 (1915)
Q Consensus 119 ~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s 198 (1915)
..+|..||..|++++.++||+.||+...+|+||++|++||||+||++||+++.|.|+++|.+||+|||.||+.||+++ |
T Consensus 2 ~~~c~~il~~l~~~~~~~~F~~pv~~~~~p~Y~~iIk~PmdL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~~-s 80 (97)
T cd05503 2 LALCETILDEMEAHEDAWPFLEPVNTKLVPGYRKIIKKPMDFSTIREKLESGQYKTLEEFAEDVRLVFDNCETFNEDD-S 80 (97)
T ss_pred HHHHHHHHHHHHcCCCchhhcCCCCccccCCHHHHhCCCCCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHCCCC-C
Confidence 367999999999999999999999999999999999999999999999999999999999999999999999999976 9
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy9598 199 KIYIMTTRLSEFAEEHL 215 (1915)
Q Consensus 199 ~i~~~a~~l~~~f~~~~ 215 (1915)
.++++|..|+++|+++|
T Consensus 81 ~i~~~a~~l~~~f~~~~ 97 (97)
T cd05503 81 EVGRAGHNMRKFFEKRW 97 (97)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999999876
No 130
>KOG0646|consensus
Probab=99.89 E-value=5.8e-22 Score=230.03 Aligned_cols=290 Identities=20% Similarity=0.306 Sum_probs=228.9
Q ss_pred EEECC-CcEEEEECCCCcEEEEEeCC-CCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCCCceEEEeecCCCCeEEEEec
Q psy9598 493 TGADD-LLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGT-VDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 569 (1915)
Q Consensus 493 TGs~D-g~I~IWd~~tg~~~~~l~gH-~~~I~~Lafspdg~~LaSgs-~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fs 569 (1915)
+++.| .++.+||+.||..+.+++|. ...-.++..- .+.+++++. .-..|.+|.+..........--.+.|.+++-+
T Consensus 12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~ 90 (476)
T KOG0646|consen 12 SSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASS 90 (476)
T ss_pred ccCCCCcceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecC
Confidence 34444 45999999999999999876 2222222221 234666664 44579999997655444333356789999999
Q ss_pred cCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecC
Q psy9598 570 PLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 649 (1915)
Q Consensus 570 p~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~ 649 (1915)
|. |.+|+.|+-.|.|.+|.+.+|..+..+ .+|...|+|+.|+-||.+|++||.||.|.+|.+..
T Consensus 91 n~----G~~l~ag~i~g~lYlWelssG~LL~v~------------~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~ 154 (476)
T KOG0646|consen 91 NL----GYFLLAGTISGNLYLWELSSGILLNVL------------SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD 154 (476)
T ss_pred CC----ceEEEeecccCcEEEEEeccccHHHHH------------HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe
Confidence 84 488888889999999999999754433 35678899999999999999999999999999842
Q ss_pred ------CCCCceeEEeccCCCCeeEEEEcCCC--CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccccc
Q psy9598 650 ------VDSPLGILEVEEHSDKVDSIQWSHSH--LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721 (1915)
Q Consensus 650 ------~~~~~~i~~l~~h~~~V~sl~fspdg--~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1915)
......+..+..|+-+|+.+...+.| .+|+|+|.|.++++||+..+..+.... ..
T Consensus 155 lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-----------------fp 217 (476)
T KOG0646|consen 155 LVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-----------------FP 217 (476)
T ss_pred ecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-----------------cC
Confidence 22566778899999999999987654 589999999999999999987554321 44
Q ss_pred ccEEEEEECCCCCEEEEEEecCCeEEEEECCC----------------CceEEEeeCCCC--CeEEEEEccCCCCEEEEE
Q psy9598 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFN----------------GDLVQVLKGHTN--EVFVLESHPFDSRVLLSA 783 (1915)
Q Consensus 722 ~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t----------------g~~i~~l~gH~~--~V~sl~~sp~dg~~LaSg 783 (1915)
..+.+++++|.++.+++|+. +|.|.+.++.. +..+..+.||.+ .|+|++++- ||.+|++|
T Consensus 218 ~si~av~lDpae~~~yiGt~-~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~-DgtlLlSG 295 (476)
T KOG0646|consen 218 SSIKAVALDPAERVVYIGTE-EGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIST-DGTLLLSG 295 (476)
T ss_pred CcceeEEEcccccEEEecCC-cceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEec-CccEEEee
Confidence 67899999999999999998 99999988753 234667889998 999999998 99999999
Q ss_pred ecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCC
Q psy9598 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPD 825 (1915)
Q Consensus 784 s~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpd 825 (1915)
+.||.|+|||+.+.++ ++++. +..++|+.+.+.|-
T Consensus 296 d~dg~VcvWdi~S~Q~--iRtl~-----~~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 296 DEDGKVCVWDIYSKQC--IRTLQ-----TSKGPVTNLQINPL 330 (476)
T ss_pred CCCCCEEEEecchHHH--HHHHh-----hhccccceeEeecc
Confidence 9999999999999888 66654 35578888888663
No 131
>KOG4283|consensus
Probab=99.89 E-value=1e-21 Score=214.56 Aligned_cols=295 Identities=17% Similarity=0.274 Sum_probs=224.1
Q ss_pred cCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCc------E----EEE-----EeCCCCCEEEEEEeC-CCCEEEE
Q psy9598 473 LGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGK------L----LAT-----LRGCSGEISDIAIDN-RNILLAA 535 (1915)
Q Consensus 473 ~gH~~~V~~vafsp-dg~~LaTGs~Dg~I~IWd~~tg~------~----~~~-----l~gH~~~I~~Lafsp-dg~~LaS 535 (1915)
.-|.++|+++.+.+ .|+|+++|+.||.|.|||+.... + +.. -.+|.-.|.++.|-| |..++.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 36889999999987 58999999999999999987532 1 111 147888999999988 6668899
Q ss_pred EeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccC
Q psy9598 536 GTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 615 (1915)
Q Consensus 536 gs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~ 615 (1915)
+|.|.+++|||++|.+....|. ..+.|.+-+++|... ...++++|..+-.|++.|+.+|... ..+.
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~-sHcLiA~gtr~~~VrLCDi~SGs~s------------H~Ls 185 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAM-SHCLIAAGTRDVQVRLCDIASGSFS------------HTLS 185 (397)
T ss_pred ccccceEEEeecccceeeEEee-cCceeehhhcChhhh-cceEEEEecCCCcEEEEeccCCcce------------eeec
Confidence 9999999999999988777775 567888888988651 3457778888899999999988543 3345
Q ss_pred CCCCceEEEEECCCCcE-EEEEeCCCeEEEEEecCCC------------CCceeEEeccCCCCeeEEEEcCCCCEEEEEe
Q psy9598 616 PGNAHILCSSFSPGGLF-LATGSGDHHVRVYKMDGVD------------SPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 682 (1915)
Q Consensus 616 ~~~~~V~~l~fspdg~~-Lasgs~Dg~I~IwDl~~~~------------~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs 682 (1915)
+|...|.++.|+|...+ |++|+.||.|++||++... .+..+..-.+|.+.|.+++|+.+|.++++++
T Consensus 186 GHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~g 265 (397)
T KOG4283|consen 186 GHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCG 265 (397)
T ss_pred cccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhcc
Confidence 77899999999998765 7889999999999996431 1112223457889999999999999999999
Q ss_pred CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC
Q psy9598 683 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g 762 (1915)
.|..+++|+...+....... +........ ...+. +. +.+...+ +.-..++.+.++++-.|..+..+.+
T Consensus 266 td~r~r~wn~~~G~ntl~~~-------g~~~~n~~~--~~~~~-~~-~~~s~vf-v~~p~~~~lall~~~sgs~ir~l~~ 333 (397)
T KOG4283|consen 266 TDDRIRVWNMESGRNTLREF-------GPIIHNQTT--SFAVH-IQ-SMDSDVF-VLFPNDGSLALLNLLEGSFVRRLST 333 (397)
T ss_pred CccceEEeecccCccccccc-------ccccccccc--cceEE-Ee-ecccceE-EEEecCCeEEEEEccCceEEEeeec
Confidence 99999999998876321110 000000111 11111 22 2222222 2333378999999999999999999
Q ss_pred CCCCeEEEEEccCCCCEEEEEecCceEEEEEC
Q psy9598 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 763 H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
|-..|.|.++-| +-..+.+|..||.|..|-.
T Consensus 334 h~k~i~c~~~~~-~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 334 HLKRINCAAYRP-DFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ccceeeEEeecC-chhhhhccccCCccccccc
Confidence 988999999988 7778899999999999987
No 132
>cd05495 Bromo_cbp_like Bromodomain, cbp_like subfamily. Cbp (CREB binding protein or CREBBP) is an acetyltransferase acting on histone, which gives a specific tag for transcriptional activation and also acetylates non-histone proteins. CREBBP binds specifically to phosphorylated CREB protein and augments the activity of phosphorylated CREB to activate transcription of cAMP-responsive genes. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.89 E-value=2.7e-23 Score=208.05 Aligned_cols=104 Identities=38% Similarity=0.640 Sum_probs=99.2
Q ss_pred chhhHHHHHHHHHHHHcC-CCCCCCCCCCCCC--CCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhh
Q psy9598 1530 PFNWKNECREVLETLWVC-PDSEPFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 1606 (1915)
Q Consensus 1530 ~~~~~~~~~~ll~~l~~~-~~s~~F~~pv~~~--~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~ 1606 (1915)
|++|++.|..+|+.|+++ +.|+||+.||++. ++||||++|++||||+||++||.+|.|.++.+|..||+|||.||+.
T Consensus 1 ~~~l~~~~~~il~~l~~~~~~s~~F~~PV~~~~~~~pdY~~iIk~PmDL~tI~~kL~~~~Y~s~~ef~~D~~li~~Na~~ 80 (108)
T cd05495 1 PEELRQALMPTLEKLYKQDPESLPFRQPVDPKLLGIPDYFDIVKNPMDLSTIRRKLDTGQYQDPWQYVDDVWLMFDNAWL 80 (108)
T ss_pred CHHHHHHHHHHHHHHHHcCcccchhcCCCCccccCCCcHHHHhCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 467899999999999998 9999999999965 7999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1607 YNQNKRSKIYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1607 yN~~~~s~i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
||+++ |.+|.+|..|+++|+++++.+.
T Consensus 81 yN~~~-s~i~~~a~~l~~~F~~~~~~~~ 107 (108)
T cd05495 81 YNRKT-SRVYKYCTKLAEVFEQEIDPVM 107 (108)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHHHHHHh
Confidence 99987 9999999999999999998764
No 133
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.89 E-value=1.7e-20 Score=226.85 Aligned_cols=295 Identities=13% Similarity=0.085 Sum_probs=213.7
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEE-EEEeCCCcEEEEECCCCceEEEeecCCCCeEEE
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL-AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 566 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~L-aSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl 566 (1915)
+.+++|++.|+.|.+||+.+++.+..+.+|.. +.+++|++++..| ++++.++.|++||+.+++.+..+..+.. +..+
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~ 78 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELF 78 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEE
Confidence 35788999999999999999999999887654 6789999999876 5667889999999999988877765544 5678
Q ss_pred EeccCccCCCcEE-EEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCC-eEEE
Q psy9598 567 NFCPLEVNGFNYL-ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH-HVRV 644 (1915)
Q Consensus 567 ~fsp~~~~d~~~L-~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg-~I~I 644 (1915)
+|+|++ +.| ++++.++.|.+||+.+...+..+.. ...+.+++|+|+|.++++++.++ .+.+
T Consensus 79 ~~~~~g----~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-------------~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 141 (300)
T TIGR03866 79 ALHPNG----KILYIANEDDNLVTVIDIETRKVLAEIPV-------------GVEPEGMAVSPDGKIVVNTSETTNMAHF 141 (300)
T ss_pred EECCCC----CEEEEEcCCCCeEEEEECCCCeEEeEeeC-------------CCCcceEEECCCCCEEEEEecCCCeEEE
Confidence 899843 555 4556789999999987643322211 13457899999999999988775 4677
Q ss_pred EEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE-eCCCcEEEEEccCCceEEeeecccccCCCCcccccccccccc
Q psy9598 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG-SRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723 (1915)
Q Consensus 645 wDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg-s~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1915)
||... ...+..+. ....+.+++|+++|.+|+++ ..+|.|.+||+.+++........ ... .......
T Consensus 142 ~d~~~---~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~---~~~------~~~~~~~ 208 (300)
T TIGR03866 142 IDTKT---YEIVDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFE---IPG------VHPEAVQ 208 (300)
T ss_pred EeCCC---CeEEEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeec---ccc------cccccCC
Confidence 78743 22222222 23346789999999988554 56999999999987643321100 000 0001122
Q ss_pred EEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEE-ecCceEEEEECCCCccccc
Q psy9598 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA-GHDGLIIIWDILSSKQRGY 802 (1915)
Q Consensus 724 V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSg-s~DG~I~IWdl~s~~~~~~ 802 (1915)
...++|++++++++++...++.|.+||+.+++.+..+. +...+.+++|+| ++.+|+++ +.+|.|.|||+.+++. +
T Consensus 209 ~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~-~g~~l~~~~~~~~~i~v~d~~~~~~--~ 284 (300)
T TIGR03866 209 PVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTP-DEKYLLTTNGVSNDVSVIDVAALKV--I 284 (300)
T ss_pred ccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECC-CCCEEEEEcCCCCeEEEEECCCCcE--E
Confidence 34688999999977665447789999999988877654 445789999999 88888876 5699999999999887 6
Q ss_pred eeeeeeecCCCCcceEEEEEcC
Q psy9598 803 KWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 803 ~~~~~~~~~~~~~~V~~vafSp 824 (1915)
..+. .....+.++|+|
T Consensus 285 ~~~~------~~~~~~~~~~~~ 300 (300)
T TIGR03866 285 KSIK------VGRLPWGVVVRP 300 (300)
T ss_pred EEEE------cccccceeEeCC
Confidence 6654 124457777765
No 134
>KOG0289|consensus
Probab=99.89 E-value=1.8e-21 Score=223.02 Aligned_cols=285 Identities=21% Similarity=0.253 Sum_probs=232.3
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc
Q psy9598 519 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598 (1915)
Q Consensus 519 ~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~ 598 (1915)
..|+++...+....+++|+.|.++.++|..+++.+.++.||...|+++.|+|.. ..+++++.|..|++|.......
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~----~~v~~aSad~~i~vws~~~~s~ 295 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDL----DTVITASADEIIRVWSVPLSSE 295 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccch----hheeecCCcceEEeeccccccC
Confidence 457778888877789999999999999999999999999999999999999954 8999999999999998765532
Q ss_pred ccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEE
Q psy9598 599 ISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678 (1915)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L 678 (1915)
. ....+|...|+.+..+|.|.+|++++.||+..+.|+..... .....-....-.+++.+|+|||.+|
T Consensus 296 ~------------~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~-lt~vs~~~s~v~~ts~~fHpDgLif 362 (506)
T KOG0289|consen 296 P------------TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQ-LTVVSDETSDVEYTSAAFHPDGLIF 362 (506)
T ss_pred c------------cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcE-EEEEeeccccceeEEeeEcCCceEE
Confidence 1 22346789999999999999999999999999999943322 2222122233458999999999999
Q ss_pred EEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEE
Q psy9598 679 VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758 (1915)
Q Consensus 679 ~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~ 758 (1915)
.+|+.||.|+|||+..+.. ...+.+|.++|..++|+-+|-||++++. |+.|++||++..+...
T Consensus 363 gtgt~d~~vkiwdlks~~~----------------~a~Fpght~~vk~i~FsENGY~Lat~ad-d~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 363 GTGTPDGVVKIWDLKSQTN----------------VAKFPGHTGPVKAISFSENGYWLATAAD-DGSVKLWDLRKLKNFK 425 (506)
T ss_pred eccCCCceEEEEEcCCccc----------------cccCCCCCCceeEEEeccCceEEEEEec-CCeEEEEEehhhcccc
Confidence 9999999999999987651 2234568999999999999999999999 9999999999888777
Q ss_pred EeeCCC-CCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCe
Q psy9598 759 VLKGHT-NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGH 837 (1915)
Q Consensus 759 ~l~gH~-~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~ 837 (1915)
++.-.. ..|.+++|.+ .|.+|+.+|.|=.|++++-.+..-..+..+. .+.+..+++.|....++|++++.|..
T Consensus 426 t~~l~~~~~v~s~~fD~-SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~-----~~sg~st~v~Fg~~aq~l~s~smd~~ 499 (506)
T KOG0289|consen 426 TIQLDEKKEVNSLSFDQ-SGTYLGIAGSDLQVYICKKKTKSWTEIKELA-----DHSGLSTGVRFGEHAQYLASTSMDAI 499 (506)
T ss_pred eeeccccccceeEEEcC-CCCeEEeecceeEEEEEecccccceeeehhh-----hcccccceeeecccceEEeeccchhh
Confidence 776433 3799999999 9999999998877877775443321133332 34468889999999999999999999
Q ss_pred EEEEeC
Q psy9598 838 LLVYGL 843 (1915)
Q Consensus 838 I~Iwdl 843 (1915)
++|+.+
T Consensus 500 l~~~a~ 505 (506)
T KOG0289|consen 500 LRLYAL 505 (506)
T ss_pred eEEeec
Confidence 888865
No 135
>cd05505 Bromo_WSTF_like Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two chromatin remodeling complexes, WINAC and WICH. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.89 E-value=1.9e-23 Score=204.38 Aligned_cols=94 Identities=30% Similarity=0.513 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCH
Q psy9598 1535 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSK 1614 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~ 1614 (1915)
++|.+||+.|++++.|+||+.||++.++||||++|++||||+||++||+.|.|.|+++|.+||+|||.||+.||+++ |.
T Consensus 3 ~~c~~il~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~~-s~ 81 (97)
T cd05505 3 QKCEEILSKILKYRFSWPFREPVTADEAEDYKKVITNPMDLQTMQTKCSCGSYSSVQEFLDDMKLVFSNAEKYYENG-SY 81 (97)
T ss_pred HHHHHHHHHHHhCCCcccccCCCChhhcccHHHHcCCcCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHHHHH
Q psy9598 1615 IYIMTTRLSEFAEEH 1629 (1915)
Q Consensus 1615 i~~~a~~l~~~f~~~ 1629 (1915)
||.+|..|+++|.++
T Consensus 82 i~~~a~~le~~f~~~ 96 (97)
T cd05505 82 VLSCMRKTEQCCVNL 96 (97)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 136
>KOG0264|consensus
Probab=99.89 E-value=6.3e-22 Score=230.08 Aligned_cols=264 Identities=19% Similarity=0.365 Sum_probs=209.5
Q ss_pred ecCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCC----------cEEEEEeCCCCCEEEEEEeCC-CCEEEEEeCC
Q psy9598 472 NLGHLSAVFCVLFDKLG-EVIVTGADDLLIKLWRARDG----------KLLATLRGCSGEISDIAIDNR-NILLAAGTVD 539 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg-~~LaTGs~Dg~I~IWd~~tg----------~~~~~l~gH~~~I~~Lafspd-g~~LaSgs~D 539 (1915)
..-|.+.|+.+.+-|.. .+|||++..+.|.|||..+. .+-.+|.||...-.+|+|++. .-.|++|+.|
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence 34699999999999865 56677888999999997543 223478999998899999985 4489999999
Q ss_pred CcEEEEECCCC-------ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcccccc
Q psy9598 540 KTIRIWNLQTL-------APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE 612 (1915)
Q Consensus 540 gtIrVWDl~tg-------~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~ 612 (1915)
++|++||+... .+...+.+|...|..++|++.. ..+|++++.|+.+.|||++++.... ..
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h---~~lF~sv~dd~~L~iwD~R~~~~~~----------~~ 266 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLH---EDLFGSVGDDGKLMIWDTRSNTSKP----------SH 266 (422)
T ss_pred CcEEEEeccccccCCccccceEEeecCCcceehhhccccc---hhhheeecCCCeEEEEEcCCCCCCC----------cc
Confidence 99999999743 3456788999999999999964 5899999999999999999641111 12
Q ss_pred ccCCCCCceEEEEECC-CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEE
Q psy9598 613 RIRPGNAHILCSSFSP-GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIW 690 (1915)
Q Consensus 613 ~~~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IW 690 (1915)
...+|.+.|.|++|+| ++..||+|+.|++|.+||+++... ++..+.+|...|.+|.|+|.. ..|++++.||.+.||
T Consensus 267 ~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vW 344 (422)
T KOG0264|consen 267 SVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK--PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVW 344 (422)
T ss_pred cccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc--CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEE
Confidence 2346789999999999 466788999999999999976553 678899999999999999975 478999999999999
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
|+..-.-.....+.. -..........+|...|..+.|+|+..+++++...|+.+.||...
T Consensus 345 Dls~ig~eq~~eda~--dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 345 DLSRIGEEQSPEDAE--DGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred eccccccccChhhhc--cCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 987543221111111 111122355678999999999999999999888889999999874
No 137
>KOG1445|consensus
Probab=99.89 E-value=3.9e-21 Score=226.48 Aligned_cols=206 Identities=15% Similarity=0.164 Sum_probs=141.2
Q ss_pred eEEecCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCcEE------EEEeCCCCCEEEEEEeCCCCEEEEEeCCCc
Q psy9598 469 HYVNLGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLL------ATLRGCSGEISDIAIDNRNILLAAGTVDKT 541 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafsp-dg~~LaTGs~Dg~I~IWd~~tg~~~------~~l~gH~~~I~~Lafspdg~~LaSgs~Dgt 541 (1915)
+-.|.+|.+.|+.+.|+| +..+|||||.|..|+||.+..|... ..+.+..-.|-||.|+|...-|+..+.-|+
T Consensus 72 i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~ 151 (1012)
T KOG1445|consen 72 IGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGS 151 (1012)
T ss_pred cceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCce
Confidence 346789999999999998 5668999999999999999855211 123333456789999996544444455799
Q ss_pred EEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc-ccceeccCccccccccCCCCC-
Q psy9598 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID-ISKTVFHEPVMFNERIRPGNA- 619 (1915)
Q Consensus 542 IrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~-~~~~~~~~~~~~~~~~~~~~~- 619 (1915)
+.|||+.+++.+..+.+|...|.+..|+. +|.+|+++|.|..|+|||.+.... +.... +|.+
T Consensus 152 v~i~D~stqk~~~el~~h~d~vQSa~Wse----DG~llatscKdkqirifDPRa~~~piQ~te------------~H~~~ 215 (1012)
T KOG1445|consen 152 VYITDISTQKTAVELSGHTDKVQSADWSE----DGKLLATSCKDKQIRIFDPRASMEPIQTTE------------GHGGM 215 (1012)
T ss_pred EEEEEcccCceeecccCCchhhhcccccc----CCceEeeecCCcceEEeCCccCCCcccccc------------ccccc
Confidence 99999999999999999999999999998 569999999999999999876532 11111 1111
Q ss_pred ceEEEEECCCCcEEEEEeCC----CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEE-EEeCCCcEEEEE
Q psy9598 620 HILCSSFSPGGLFLATGSGD----HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV-SGSRDGTALIWY 691 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~D----g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~-sgs~DG~I~IWD 691 (1915)
.-..+.|.-+-..|++.+.+ ..|++||.+....+.....+....+ |.--.|.||.++|+ +|-.+.++.++.
T Consensus 216 rdsRv~w~Gn~~rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld~stG-vLiPl~DpDt~llfLaGKG~~~l~~lE 291 (1012)
T KOG1445|consen 216 RDSRVLWAGNWERLISTGFTTKRIREVRAYDTRKFGAPVHTLELDSSTG-VLIPLYDPDTRLLFLAGKGTNKLFMLE 291 (1012)
T ss_pred hhheeeeccchhhhhhcccchhhheeeeeeeccccCCcceeEEeecccc-eEeeeecCCCceEEEecCCcceEEEEE
Confidence 12234555444455555543 4688999876666655555544333 33333566655433 333444454443
No 138
>KOG1332|consensus
Probab=99.89 E-value=3.5e-22 Score=214.00 Aligned_cols=266 Identities=21% Similarity=0.265 Sum_probs=203.7
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC---ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEE
Q psy9598 515 RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL---APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591 (1915)
Q Consensus 515 ~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg---~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iW 591 (1915)
..|...|.++...--|..|||++.|++|+|+.+... .++..|.||.++|+.++|... .-|.+|++++.||.|.||
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahP--k~G~iLAScsYDgkVIiW 85 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHP--KFGTILASCSYDGKVIIW 85 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeeccc--ccCcEeeEeecCceEEEE
Confidence 578999999999999999999999999999999754 468899999999999999752 357999999999999999
Q ss_pred ecccCccccceeccCccccccccCCCCCceEEEEECCC--CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEE
Q psy9598 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG--GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSI 669 (1915)
Q Consensus 592 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl 669 (1915)
.-.++.-.... ....|...|++++|.|. |-.|++++.||.|.|++++.............|.-.|+++
T Consensus 86 ke~~g~w~k~~----------e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsV 155 (299)
T KOG1332|consen 86 KEENGRWTKAY----------EHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSV 155 (299)
T ss_pred ecCCCchhhhh----------hhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccccccee
Confidence 98777422221 22367889999999996 6689999999999999997653333344567899999999
Q ss_pred EEcCC---CCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeE
Q psy9598 670 QWSHS---HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQI 746 (1915)
Q Consensus 670 ~fspd---g~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I 746 (1915)
+|.|. |..+-.+.. . .-..|++|+. |..|
T Consensus 156 swapa~~~g~~~~~~~~--------------------------------------~---------~~krlvSgGc-Dn~V 187 (299)
T KOG1332|consen 156 SWAPASAPGSLVDQGPA--------------------------------------A---------KVKRLVSGGC-DNLV 187 (299)
T ss_pred eecCcCCCccccccCcc--------------------------------------c---------ccceeeccCC-ccce
Confidence 99986 211100000 0 0134566666 8888
Q ss_pred EEEECCCC--ceEEEeeCCCCCeEEEEEccCC---CCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEE
Q psy9598 747 KIWDAFNG--DLVQVLKGHTNEVFVLESHPFD---SRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGK 821 (1915)
Q Consensus 747 ~vwD~~tg--~~i~~l~gH~~~V~sl~~sp~d---g~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~va 821 (1915)
+||...++ .+-.+|.+|.+.|..++|.|.. ..+||+|+.||+|.||....... .....+...-...++.+.
T Consensus 188 kiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e----~wk~tll~~f~~~~w~vS 263 (299)
T KOG1332|consen 188 KIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYE----PWKKTLLEEFPDVVWRVS 263 (299)
T ss_pred eeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccC----cccccccccCCcceEEEE
Confidence 88887765 3345688999999999999953 24899999999999998873322 111111122457899999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCC
Q psy9598 822 WSPDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 822 fSpdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
||..|++||+++.|+.|.+|--.
T Consensus 264 WS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 264 WSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred EeccccEEEEecCCcEEEEEEeC
Confidence 99999999999999999999654
No 139
>cd05508 Bromo_RACK7 Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular proliferation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.89 E-value=4.3e-23 Score=202.10 Aligned_cols=96 Identities=32% Similarity=0.530 Sum_probs=91.5
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q psy9598 117 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~ 196 (1915)
++...++.+++.|+ |+.++||.+||+..++||||++|++||||+||++||++|.|.++++|.+||+|||.||++||+++
T Consensus 3 ~l~~~L~~~~~~~~-~~~s~~F~~PV~~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~Dv~LI~~Na~~YN~~~ 81 (99)
T cd05508 3 QLSKLLKFALERMK-QPGAEPFLKPVDLEQFPDYAQYVFKPMDLSTLEKNVRKKAYGSTDAFLADAKWILHNAIIYNGGD 81 (99)
T ss_pred HHHHHHHHHHHHHh-CcCcchhcCCCChhhCCCHHHHcCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 56778889999999 99999999999999999999999999999999999999999999999999999999999999977
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy9598 197 RSKIYIMTTRLSEFAEEH 214 (1915)
Q Consensus 197 ~s~i~~~a~~l~~~f~~~ 214 (1915)
|.++.+|..|.+.|+..
T Consensus 82 -s~i~~~A~~l~~~~~~e 98 (99)
T cd05508 82 -HKLTQAAKAIVKICEQE 98 (99)
T ss_pred -CHHHHHHHHHHHHHHhh
Confidence 99999999999999764
No 140
>KOG0299|consensus
Probab=99.88 E-value=2.9e-21 Score=223.66 Aligned_cols=283 Identities=18% Similarity=0.215 Sum_probs=223.0
Q ss_pred EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceec-------c-CccccccccCCCCCceEEEEE
Q psy9598 555 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-------H-EPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 555 ~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~V~~l~f 626 (1915)
.+..|.-+|++++++|+ ..++++++.+|+|.-|++.++....-..- + .+..... ..|...+.|++.
T Consensus 137 ~~~~H~~s~~~vals~d----~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r--~~h~keil~~av 210 (479)
T KOG0299|consen 137 VIGKHQLSVTSVALSPD----DKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESR--KGHVKEILTLAV 210 (479)
T ss_pred eeccccCcceEEEeecc----ccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCccc--ccccceeEEEEE
Confidence 44568999999999995 48999999999999999998864311110 0 1111111 378889999999
Q ss_pred CCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccc
Q psy9598 627 SPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT 706 (1915)
Q Consensus 627 spdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~ 706 (1915)
++||++|++|+.|..|.||+.+ +...+..+.+|.+.|.+++|-.....|++++.|++|++|++.....
T Consensus 211 S~Dgkylatgg~d~~v~Iw~~~---t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~--------- 278 (479)
T KOG0299|consen 211 SSDGKYLATGGRDRHVQIWDCD---TLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSY--------- 278 (479)
T ss_pred cCCCcEEEecCCCceEEEecCc---ccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHH---------
Confidence 9999999999999999999994 4455667899999999999998888999999999999998875442
Q ss_pred cCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecC
Q psy9598 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 707 ~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D 786 (1915)
.....+|...|..|....-++.+-+++. |.++++|++ .......+.+|.+.+-|++|-. ...|+|||.+
T Consensus 279 -------vetlyGHqd~v~~IdaL~reR~vtVGgr-DrT~rlwKi-~eesqlifrg~~~sidcv~~In--~~HfvsGSdn 347 (479)
T KOG0299|consen 279 -------VETLYGHQDGVLGIDALSRERCVTVGGR-DRTVRLWKI-PEESQLIFRGGEGSIDCVAFIN--DEHFVSGSDN 347 (479)
T ss_pred -------HHHHhCCccceeeechhcccceEEeccc-cceeEEEec-cccceeeeeCCCCCeeeEEEec--ccceeeccCC
Confidence 2345678889999988887887777777 999999999 4455567789999999999974 6789999999
Q ss_pred ceEEEEECCCCccccceeeeeeecC-------CCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc----cccC---
Q psy9598 787 GLIIIWDILSSKQRGYKWFHNIVEG-------QGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKR----PQNI--- 852 (1915)
Q Consensus 787 G~I~IWdl~s~~~~~~~~~~~~~~~-------~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~----~~~l--- 852 (1915)
|.|.+|++...++ +.+....... .++..|++++..|...++|+|+.+|.|++|.+..+-. +..+
T Consensus 348 G~IaLWs~~KKkp--lf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~ 425 (479)
T KOG0299|consen 348 GSIALWSLLKKKP--LFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLV 425 (479)
T ss_pred ceEEEeeecccCc--eeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccc
Confidence 9999999998887 5444321110 1113899999999999999999999999999998732 2222
Q ss_pred --CCceeecCCCCeeeec
Q psy9598 853 --PRELFFHTDYRTLNRP 868 (1915)
Q Consensus 853 --~~~~~F~~d~~~Lv~~ 868 (1915)
...++|+.++..++.+
T Consensus 426 GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 426 GFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred cEEEEEEEccCCCEEEEe
Confidence 3378899999866644
No 141
>KOG4283|consensus
Probab=99.88 E-value=2.5e-21 Score=211.63 Aligned_cols=298 Identities=20% Similarity=0.320 Sum_probs=224.8
Q ss_pred eCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCc----------eEE-----EeecCCCCeEEEEeccCccCCCcE
Q psy9598 515 RGCSGEISDIAIDN-RNILLAAGTVDKTIRIWNLQTLA----------PIS-----VLVGHQGIITGVNFCPLEVNGFNY 578 (1915)
Q Consensus 515 ~gH~~~I~~Lafsp-dg~~LaSgs~DgtIrVWDl~tg~----------~~~-----~l~~h~~~V~sl~fsp~~~~d~~~ 578 (1915)
+.|.+.|++|.+.+ .|+++++|+.||.|.|||++... .+. .-.+|.-.|.++.|-|. +..+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~---DtGm 116 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPI---DTGM 116 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeee---cCce
Confidence 45889999999987 58999999999999999997532 011 11357789999999995 5689
Q ss_pred EEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC---CcEEEEEeCCCeEEEEEecCCCCCce
Q psy9598 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG---GLFLATGSGDHHVRVYKMDGVDSPLG 655 (1915)
Q Consensus 579 L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd---g~~Lasgs~Dg~I~IwDl~~~~~~~~ 655 (1915)
+.++|.|.++++||..+.+....+.+. +.|++-++||- ..+||+|..+-.|++.|+ ..+..
T Consensus 117 FtssSFDhtlKVWDtnTlQ~a~~F~me-------------~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi---~SGs~ 180 (397)
T KOG4283|consen 117 FTSSSFDHTLKVWDTNTLQEAVDFKME-------------GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDI---ASGSF 180 (397)
T ss_pred eecccccceEEEeecccceeeEEeecC-------------ceeehhhcChhhhcceEEEEecCCCcEEEEec---cCCcc
Confidence 999999999999999987665554444 66778788873 457888999999999999 45567
Q ss_pred eEEeccCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC
Q psy9598 656 ILEVEEHSDKVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR 734 (1915)
Q Consensus 656 i~~l~~h~~~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~ 734 (1915)
.+.+.||.+.|.+|.|+|... .|++|+.||.|++||++...-....++..... ..+.......|.+.|+.++|+.++.
T Consensus 181 sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k-~~p~~~~n~ah~gkvngla~tSd~~ 259 (397)
T KOG4283|consen 181 SHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTK-RPPILKTNTAHYGKVNGLAWTSDAR 259 (397)
T ss_pred eeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCc-cCccccccccccceeeeeeecccch
Confidence 788999999999999999887 57899999999999998763222233322211 1112224567889999999999999
Q ss_pred EEEEEEecCCeEEEEECCCCceEEEee---CCCC----CeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeee
Q psy9598 735 WVITAINFNFQIKIWDAFNGDLVQVLK---GHTN----EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHN 807 (1915)
Q Consensus 735 ~L~t~s~~Dg~I~vwD~~tg~~i~~l~---gH~~----~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~ 807 (1915)
++++++. |..+++|+..+|.-...-. .|.. .+. +. +- +...++---.++.+.++++.++.. +..+.
T Consensus 260 ~l~~~gt-d~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~-~s~vfv~~p~~~~lall~~~sgs~--ir~l~- 332 (397)
T KOG4283|consen 260 YLASCGT-DDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SM-DSDVFVLFPNDGSLALLNLLEGSF--VRRLS- 332 (397)
T ss_pred hhhhccC-ccceEEeecccCcccccccccccccccccceEE-Ee-ec-ccceEEEEecCCeEEEEEccCceE--EEeee-
Confidence 9999999 9999999998775321110 1111 111 22 22 344455555668888888888877 66555
Q ss_pred eecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 808 IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 808 ~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
.|...|.++++-|+-..+.+|+.||.|..|..
T Consensus 333 ----~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 333 ----THLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ----cccceeeEEeecCchhhhhccccCCccccccc
Confidence 34567899999999999999999999999976
No 142
>KOG0646|consensus
Probab=99.88 E-value=6.7e-22 Score=229.48 Aligned_cols=229 Identities=18% Similarity=0.268 Sum_probs=197.9
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC-------
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ------- 548 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~------- 548 (1915)
.+.|.|++-+|+|.+|+.|+-.|.|++|.+.+|.++..+.+|-..|+||.|+.||.+|+|||.||.|.+|.+.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~ 160 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADN 160 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccccc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred --CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEE
Q psy9598 549 --TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 549 --tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f 626 (1915)
+-.+++.+..|+-+|+++...+-+ -..+|+|+|.|.++++||+..+..+.+..+. ..+.|+++
T Consensus 161 ~~~~~p~~~f~~HtlsITDl~ig~Gg--~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp-------------~si~av~l 225 (476)
T KOG0646|consen 161 DHSVKPLHIFSDHTLSITDLQIGSGG--TNARLYTASEDRTIKLWDLSLGVLLLTITFP-------------SSIKAVAL 225 (476)
T ss_pred CCCccceeeeccCcceeEEEEecCCC--ccceEEEecCCceEEEEEeccceeeEEEecC-------------CcceeEEE
Confidence 346788999999999999988743 3579999999999999999999887777776 67899999
Q ss_pred CCCCcEEEEEeCCCeEEEEEecCCC-------------CCceeEEeccCCC--CeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy9598 627 SPGGLFLATGSGDHHVRVYKMDGVD-------------SPLGILEVEEHSD--KVDSIQWSHSHLRFVSGSRDGTALIWY 691 (1915)
Q Consensus 627 spdg~~Lasgs~Dg~I~IwDl~~~~-------------~~~~i~~l~~h~~--~V~sl~fspdg~~L~sgs~DG~I~IWD 691 (1915)
+|.+..+++|+.+|.|.+.++.+.. ....+..+.||.+ .|+|++++-||.+|++|+.||.|+|||
T Consensus 226 Dpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWd 305 (476)
T KOG0646|consen 226 DPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWD 305 (476)
T ss_pred cccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence 9999999999999999998875332 2234556788988 999999999999999999999999999
Q ss_pred ccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCE
Q psy9598 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 735 (1915)
Q Consensus 692 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~ 735 (1915)
+.+.+++.... ...+.|+.+.+.|--+.
T Consensus 306 i~S~Q~iRtl~----------------~~kgpVtnL~i~~~~~~ 333 (476)
T KOG0646|consen 306 IYSKQCIRTLQ----------------TSKGPVTNLQINPLERG 333 (476)
T ss_pred cchHHHHHHHh----------------hhccccceeEeeccccc
Confidence 99888654221 14566777777654333
No 143
>KOG0269|consensus
Probab=99.88 E-value=4.8e-22 Score=241.63 Aligned_cols=288 Identities=19% Similarity=0.265 Sum_probs=224.9
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCC----cEEEEEeCCC---CCEEEEEEeC-CCCEEEEEeCCCcEEEEECCC
Q psy9598 478 AVFCVLFDKLGEVIVTGADDLLIKLWRARDG----KLLATLRGCS---GEISDIAIDN-RNILLAAGTVDKTIRIWNLQT 549 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg----~~~~~l~gH~---~~I~~Lafsp-dg~~LaSgs~DgtIrVWDl~t 549 (1915)
.+.+|...++-..|+.++.. .++|+.+... .+...+.+.. -.+..+.|+. +.++||+++..|.|.+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk 119 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK 119 (839)
T ss_pred ccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence 34566677888788887765 7888876532 2333332222 2355677864 467999999999999999986
Q ss_pred ---CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEE
Q psy9598 550 ---LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 550 ---g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f 626 (1915)
.+.+..|..|...|+++.|++.. ..+|++||+||+|++||++......+.. +....|..+.|
T Consensus 120 ~~rnk~l~~f~EH~Rs~~~ldfh~te---p~iliSGSQDg~vK~~DlR~~~S~~t~~------------~nSESiRDV~f 184 (839)
T KOG0269|consen 120 SIRNKLLTVFNEHERSANKLDFHSTE---PNILISGSQDGTVKCWDLRSKKSKSTFR------------SNSESIRDVKF 184 (839)
T ss_pred cccchhhhHhhhhccceeeeeeccCC---ccEEEecCCCceEEEEeeeccccccccc------------ccchhhhceee
Confidence 56677889999999999999975 4899999999999999999876543332 23467899999
Q ss_pred CCC-CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeeccc
Q psy9598 627 SPG-GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705 (1915)
Q Consensus 627 spd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~ 705 (1915)
+|. +..++++...|.+.+||++.. ..+...+.+|.++|.|+.|+|++.+|||||.|+.|+|||+.+.....
T Consensus 185 sp~~~~~F~s~~dsG~lqlWDlRqp--~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~------ 256 (839)
T KOG0269|consen 185 SPGYGNKFASIHDSGYLQLWDLRQP--DRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKP------ 256 (839)
T ss_pred ccCCCceEEEecCCceEEEeeccCc--hhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccc------
Confidence 995 678999999999999999643 34556688999999999999999999999999999999988654221
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEEEEe--cCCeEEEEECCC-CceEEEeeCCCCCeEEEEEccCCCCEEEE
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN--FNFQIKIWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~--~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaS 782 (1915)
........+|.+|.|-|...+.++.++ .|..|+|||++. .-+..++..|...++.++|-..+...|.+
T Consensus 257 ---------~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s 327 (839)
T KOG0269|consen 257 ---------KHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWS 327 (839)
T ss_pred ---------eeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEe
Confidence 112234578999999999887665543 377899999975 45677889999999999998767889999
Q ss_pred EecCceEEEEECCCCc
Q psy9598 783 AGHDGLIIIWDILSSK 798 (1915)
Q Consensus 783 gs~DG~I~IWdl~s~~ 798 (1915)
++.||+|..-.+.++.
T Consensus 328 ~sKD~tv~qh~~knat 343 (839)
T KOG0269|consen 328 CSKDGTVLQHLFKNAT 343 (839)
T ss_pred ecCccHHHHhhhhccc
Confidence 9999999776665543
No 144
>KOG1274|consensus
Probab=99.88 E-value=6.7e-21 Score=236.17 Aligned_cols=285 Identities=16% Similarity=0.221 Sum_probs=226.3
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC-ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEec
Q psy9598 515 RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL-APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593 (1915)
Q Consensus 515 ~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg-~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl 593 (1915)
.+|....+.|+|.++|.+|++++.||.|++|+..+. ..-.++..+...|.+++... .+|++|+.+++|.+|.+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s------~~f~~~s~~~tv~~y~f 83 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS------NHFLTGSEQNTVLRYKF 83 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc------cceEEeeccceEEEeeC
Confidence 368888999999999999999999999999998765 33333433777888887754 69999999999999998
Q ss_pred ccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC
Q psy9598 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 673 (1915)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp 673 (1915)
..+..-..+ ..-..++.+++|+.+|.++|.|+.|-.|++.++.. ......+.+|.++|.+|.|+|
T Consensus 84 ps~~~~~iL------------~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D---~s~~~~lrgh~apVl~l~~~p 148 (933)
T KOG1274|consen 84 PSGEEDTIL------------ARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDD---SSQEKVLRGHDAPVLQLSYDP 148 (933)
T ss_pred CCCCcccee------------eeeeccceEEEEecCCcEEEeecCceeEEEEeccc---cchheeecccCCceeeeeEcC
Confidence 876532111 11136789999999999999999999999999843 344567899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC
Q psy9598 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN 753 (1915)
Q Consensus 674 dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t 753 (1915)
.+.+||+.+.||.|+|||+.++.+.......... ........++.++|+|+|..+++.+. |+.|++|+..+
T Consensus 149 ~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~--------n~~~~s~i~~~~aW~Pk~g~la~~~~-d~~Vkvy~r~~ 219 (933)
T KOG1274|consen 149 KGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKD--------NEFILSRICTRLAWHPKGGTLAVPPV-DNTVKVYSRKG 219 (933)
T ss_pred CCCEEEEEecCceEEEEEcccchhhhhcccCCcc--------ccccccceeeeeeecCCCCeEEeecc-CCeEEEEccCC
Confidence 9999999999999999999988754432211111 11112556788999999888888887 99999999999
Q ss_pred CceEEEeeC--CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEE
Q psy9598 754 GDLVQVLKG--HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCAL 831 (1915)
Q Consensus 754 g~~i~~l~g--H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Las 831 (1915)
+.....|.. |...+.++.|+| .|.|||+++.||.|.|||+.+... . .....|++++|.|+++.|-+
T Consensus 220 we~~f~Lr~~~~ss~~~~~~wsP-nG~YiAAs~~~g~I~vWnv~t~~~---~--------~~~~~Vc~~aw~p~~n~it~ 287 (933)
T KOG1274|consen 220 WELQFKLRDKLSSSKFSDLQWSP-NGKYIAASTLDGQILVWNVDTHER---H--------EFKRAVCCEAWKPNANAITL 287 (933)
T ss_pred ceeheeecccccccceEEEEEcC-CCcEEeeeccCCcEEEEecccchh---c--------cccceeEEEecCCCCCeeEE
Confidence 998888863 444589999999 899999999999999999987322 1 12367999999999998877
Q ss_pred EeCCCeEEEE
Q psy9598 832 TDSYGHLLVY 841 (1915)
Q Consensus 832 g~~dG~I~Iw 841 (1915)
.+.-|...+|
T Consensus 288 ~~~~g~~~~~ 297 (933)
T KOG1274|consen 288 ITALGTLGVS 297 (933)
T ss_pred EeeccccccC
Confidence 7776655444
No 145
>KOG0639|consensus
Probab=99.88 E-value=1.1e-21 Score=226.62 Aligned_cols=282 Identities=14% Similarity=0.226 Sum_probs=232.2
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC---CceEEEeec--CCCCeEEEEeccCccCCCcEEEEEeCCCeEEE
Q psy9598 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT---LAPISVLVG--HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t---g~~~~~l~~--h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~i 590 (1915)
.|..-|.++++|...++++||+ .|.|+|||+.. ..++..|.. ....|.++..+| +++.|++|+.-.+|.|
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~p----dgrtLivGGeastlsi 491 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLP----DGRTLIVGGEASTLSI 491 (705)
T ss_pred ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecC----CCceEEeccccceeee
Confidence 4888888999999999999998 57899999964 234444443 346788999998 5599999999999999
Q ss_pred EecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEE
Q psy9598 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQ 670 (1915)
Q Consensus 591 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~ 670 (1915)
||+.....-....+. ...-..+.++.+||.+..++++.||.|.|||+. ....+..+.+|.+.+.||.
T Consensus 492 WDLAapTprikaelt----------ssapaCyALa~spDakvcFsccsdGnI~vwDLh---nq~~VrqfqGhtDGascId 558 (705)
T KOG0639|consen 492 WDLAAPTPRIKAELT----------SSAPACYALAISPDAKVCFSCCSDGNIAVWDLH---NQTLVRQFQGHTDGASCID 558 (705)
T ss_pred eeccCCCcchhhhcC----------CcchhhhhhhcCCccceeeeeccCCcEEEEEcc---cceeeecccCCCCCceeEE
Confidence 999876432222111 222456778999999999999999999999994 4566788999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEE
Q psy9598 671 WSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 750 (1915)
Q Consensus 671 fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD 750 (1915)
++++|..|.+|+-|.+|+.||++.+.... .......|.++..+|.+.+|++|.. ++.+.|..
T Consensus 559 is~dGtklWTGGlDntvRcWDlregrqlq-----------------qhdF~SQIfSLg~cP~~dWlavGMe-ns~vevlh 620 (705)
T KOG0639|consen 559 ISKDGTKLWTGGLDNTVRCWDLREGRQLQ-----------------QHDFSSQIFSLGYCPTGDWLAVGME-NSNVEVLH 620 (705)
T ss_pred ecCCCceeecCCCccceeehhhhhhhhhh-----------------hhhhhhhheecccCCCccceeeecc-cCcEEEEe
Confidence 99999999999999999999999876221 2235678999999999999999998 88888887
Q ss_pred CCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEE
Q psy9598 751 AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830 (1915)
Q Consensus 751 ~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~La 830 (1915)
. ++.....+.-|.+.|.+|.|.+ .|+++++.|.|..+..|..--|.. +.. ......|.+|.+|-|.++|+
T Consensus 621 ~-skp~kyqlhlheScVLSlKFa~-cGkwfvStGkDnlLnawrtPyGas--iFq------skE~SsVlsCDIS~ddkyIV 690 (705)
T KOG0639|consen 621 T-SKPEKYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGAS--IFQ------SKESSSVLSCDISFDDKYIV 690 (705)
T ss_pred c-CCccceeecccccEEEEEEecc-cCceeeecCchhhhhhccCccccc--eee------ccccCcceeeeeccCceEEE
Confidence 6 4555667778999999999999 999999999999999999877765 332 23567899999999999999
Q ss_pred EEeCCCeEEEEeC
Q psy9598 831 LTDSYGHLLVYGL 843 (1915)
Q Consensus 831 sg~~dG~I~Iwdl 843 (1915)
+|+.|.+..||.+
T Consensus 691 TGSGdkkATVYeV 703 (705)
T KOG0639|consen 691 TGSGDKKATVYEV 703 (705)
T ss_pred ecCCCcceEEEEE
Confidence 9999999988875
No 146
>cd05502 Bromo_tif1_like Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or corepressors to modulate transcription. Vertebrate Tif1-gamma, also labeled E3 ubiquitin-protein ligase TRIM33, plays a role in the control of hematopoiesis. Its homologue in Xenopus laevis, Ectodermin, has been shown to function in germ-layer specification and control of cell growth during embryogenesis. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.88 E-value=1e-22 Score=205.34 Aligned_cols=103 Identities=34% Similarity=0.574 Sum_probs=97.8
Q ss_pred hhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHhhh
Q psy9598 116 FNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRG---DNYESPIDFVKDVKRVFHNSRNY 192 (1915)
Q Consensus 116 ~~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~---~~Y~~~~~f~~D~~Lif~N~~~y 192 (1915)
...++.|..||.+|++++.++||+.||+. .+|+||++|++||||+||++||++ +.|+++++|..||+|||.||+.|
T Consensus 3 ~~~~~~c~~il~~l~~~~~s~~F~~pv~~-~~p~Y~~iI~~PmdL~tI~~kL~~~~~~~Y~s~~~f~~D~~li~~Na~~y 81 (109)
T cd05502 3 PIDQRKCERLLLELYCHELSLPFHEPVSP-SVPNYYKIIKTPMDLSLIRKKLQPKSPQHYSSPEEFVADVRLMFKNCYKF 81 (109)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhcCCCCC-CCCCHHHHCCCCccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35678899999999999999999999999 899999999999999999999998 59999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9598 193 NQNKRSKIYIMTTRLSEFAEEHLRRLTV 220 (1915)
Q Consensus 193 N~~~~s~i~~~a~~l~~~f~~~~~~~~~ 220 (1915)
|+++ |.++.+|..|++.|+++++.++.
T Consensus 82 N~~~-s~i~~~a~~l~~~f~~~~~~~~p 108 (109)
T cd05502 82 NEED-SEVAQAGKELELFFEEQLKEILP 108 (109)
T ss_pred CCCC-CHHHHHHHHHHHHHHHHHHHHCc
Confidence 9977 99999999999999999998754
No 147
>KOG2096|consensus
Probab=99.88 E-value=8.5e-21 Score=209.51 Aligned_cols=305 Identities=16% Similarity=0.174 Sum_probs=220.7
Q ss_pred EEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce-----EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC
Q psy9598 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP-----ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586 (1915)
Q Consensus 512 ~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~-----~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg 586 (1915)
.+|+||.+.|++|+|+.||+.||+++.|++|+||++..... +.. .-.-+..+.+.|.|+. ...++++-...
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~-nve~dhpT~V~FapDc---~s~vv~~~~g~ 155 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQ-NVEYDHPTRVVFAPDC---KSVVVSVKRGN 155 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhc-cccCCCceEEEECCCc---ceEEEEEccCC
Confidence 35789999999999999999999999999999999976322 111 0112355889999965 35666666777
Q ss_pred eEEEEecccCccccceecc-CccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCC
Q psy9598 587 CIGFWKYKLDIDISKTVFH-EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 665 (1915)
Q Consensus 587 tI~iWDl~~~~~~~~~~~~-~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~ 665 (1915)
++++|-+..... ....++ .+.........|...|..+-...++.+|++++.|..|.||++. ++.+..+......
T Consensus 156 ~l~vyk~~K~~d-G~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk----Gq~L~~idtnq~~ 230 (420)
T KOG2096|consen 156 KLCVYKLVKKTD-GSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK----GQLLQSIDTNQSS 230 (420)
T ss_pred EEEEEEeeeccc-CCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC----Cceeeeecccccc
Confidence 899997754322 111111 1111122334566778888888899999999999999999994 3445555555566
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe
Q psy9598 666 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745 (1915)
Q Consensus 666 V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~ 745 (1915)
-+..+.||+|+++++++-.--|++|.+--++ ............+.+|...|..++|+++...+++.+. ||.
T Consensus 231 n~~aavSP~GRFia~~gFTpDVkVwE~~f~k--------dG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSk-DG~ 301 (420)
T KOG2096|consen 231 NYDAAVSPDGRFIAVSGFTPDVKVWEPIFTK--------DGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSK-DGK 301 (420)
T ss_pred ccceeeCCCCcEEEEecCCCCceEEEEEecc--------CcchhhhhhhheeccchhheeeeeeCCCcceeEEEec-CCc
Confidence 6778899999999999999999999753221 1112222334567889999999999999999999998 999
Q ss_pred EEEEECCC----C---ceEEEe----eCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCC
Q psy9598 746 IKIWDAFN----G---DLVQVL----KGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGE 814 (1915)
Q Consensus 746 I~vwD~~t----g---~~i~~l----~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~ 814 (1915)
++|||+.- + ..+.+. ....+.-..|+.+| .+..|+.+. ...|.++...+++. ...+. ..|.
T Consensus 302 wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP-~g~~lA~s~-gs~l~~~~se~g~~--~~~~e----~~h~ 373 (420)
T KOG2096|consen 302 WRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSP-SGDSLAVSF-GSDLKVFASEDGKD--YPELE----DIHS 373 (420)
T ss_pred EEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCC-CCcEEEeec-CCceEEEEcccCcc--chhHH----Hhhc
Confidence 99999752 1 222222 12233345899999 888776554 45899999988876 44443 4567
Q ss_pred cceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 815 GALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 815 ~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
+.|.+++|+++|+++|+++. ..++|+.-
T Consensus 374 ~~Is~is~~~~g~~~atcGd-r~vrv~~n 401 (420)
T KOG2096|consen 374 TTISSISYSSDGKYIATCGD-RYVRVIRN 401 (420)
T ss_pred CceeeEEecCCCcEEeeecc-eeeeeecC
Confidence 88999999999999998876 67888763
No 148
>cd05516 Bromo_SNF2L2 Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone receptors to boost transcriptional activation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.88 E-value=8e-23 Score=204.51 Aligned_cols=101 Identities=22% Similarity=0.398 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Q psy9598 117 NWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSR 190 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~ 190 (1915)
++.+.|..||+.|+++.+ ++||.+||++.++||||++|++||||+||++||++|.|.++++|..||+|||.||+
T Consensus 1 ~l~~~~~~il~~v~~~~d~~g~~~s~~F~~~p~~~~~pdYy~iI~~Pmdl~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~ 80 (107)
T cd05516 1 ELTKKMNKIVDVVIKYKDSDGRQLAEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLEDLEKDVMLLCQNAQ 80 (107)
T ss_pred CHHHHHHHHHHHHHhhhCcCCCEeeHHhhcCCCcccCCCHHHHcCCCCCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence 367889999999999887 89999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 191 NYNQNKRSKIYIMTTRLSEFAEEHLRRL 218 (1915)
Q Consensus 191 ~yN~~~~s~i~~~a~~l~~~f~~~~~~~ 218 (1915)
.||+++ |.||.+|..|+++|+++++++
T Consensus 81 ~yN~~~-s~i~~~a~~l~~~f~~~~~~~ 107 (107)
T cd05516 81 TFNLEG-SLIYEDSIVLQSVFKSARQKI 107 (107)
T ss_pred HHCCCC-CHHHHHHHHHHHHHHHHHhcC
Confidence 999977 999999999999999998753
No 149
>KOG2445|consensus
Probab=99.88 E-value=1.3e-20 Score=208.27 Aligned_cols=286 Identities=21% Similarity=0.357 Sum_probs=213.1
Q ss_pred ecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC----cEEEEEeCCCCCEEEEEEeC--CCCEEEEEeCCCcEEEE
Q psy9598 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG----KLLATLRGCSGEISDIAIDN--RNILLAAGTVDKTIRIW 545 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg----~~~~~l~gH~~~I~~Lafsp--dg~~LaSgs~DgtIrVW 545 (1915)
..||.+-|+|+.|++.|+++|||+.|++|+|||..+. .+....+.|.+.|..|.|.+ -|+.+|++|.|++|.||
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence 4589999999999999999999999999999996433 56677899999999999965 48999999999999999
Q ss_pred ECC---------CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcc-ccccccC
Q psy9598 546 NLQ---------TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNERIR 615 (1915)
Q Consensus 546 Dl~---------tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~-~~~~~~~ 615 (1915)
.-. ......++....+.|++|.|.|.. -|-.|++++.||+|+||+.-....+..-.+.... .......
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~h--lGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~ 166 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKH--LGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPG 166 (361)
T ss_pred eecccccccccceeEEEEEeecCCcceeEEEecchh--cceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcc
Confidence 752 123456677788999999999976 5688999999999999987655433332222111 1112233
Q ss_pred CCCCceEEEEECCC---CcEEEEEeCC-----CeEEEEEecCCC-CCceeEEeccCCCCeeEEEEcCCC----CEEEEEe
Q psy9598 616 PGNAHILCSSFSPG---GLFLATGSGD-----HHVRVYKMDGVD-SPLGILEVEEHSDKVDSIQWSHSH----LRFVSGS 682 (1915)
Q Consensus 616 ~~~~~V~~l~fspd---g~~Lasgs~D-----g~I~IwDl~~~~-~~~~i~~l~~h~~~V~sl~fspdg----~~L~sgs 682 (1915)
.+.....|++|++. ..+||+|+.+ +.+.||...... ....+.++.+|+.+|++|+|.|+- ..|++++
T Consensus 167 ~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~ 246 (361)
T KOG2445|consen 167 KNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVAT 246 (361)
T ss_pred cccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEee
Confidence 45567889999985 4578888776 578899875433 556777889999999999999973 4799999
Q ss_pred CCCcEEEEEccCCceEEee-----ecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC---CC
Q psy9598 683 RDGTALIWYYKCSQWRFIR-----LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF---NG 754 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~---tg 754 (1915)
.|| |+||.+......... ......+ ..........|.+.|..+.|+-.|..|+++|. ||.|++|-.. ..
T Consensus 247 kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l-~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGd-DG~VRLWkany~n~~ 323 (361)
T KOG2445|consen 247 KDG-VRIFKVKVARSAIEEEEVLAPDLMTDL-PVEKVSELDDHNGEVWRVRWNMTGTILSSTGD-DGCVRLWKANYNNLW 323 (361)
T ss_pred cCc-EEEEEEeeccchhhhhcccCCCCcccc-ceEEeeeccCCCCceEEEEEeeeeeEEeecCC-Cceeeehhhhhhhhh
Confidence 999 999998742210000 0000001 11223456789999999999999999999998 9999999754 23
Q ss_pred ceEEEeeC
Q psy9598 755 DLVQVLKG 762 (1915)
Q Consensus 755 ~~i~~l~g 762 (1915)
+|+..+..
T Consensus 324 kC~sv~~~ 331 (361)
T KOG2445|consen 324 KCTSVLKA 331 (361)
T ss_pred eeeeEEec
Confidence 45555543
No 150
>cd05509 Bromo_gcn5_like Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.88 E-value=1.1e-22 Score=202.89 Aligned_cols=100 Identities=34% Similarity=0.578 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q psy9598 118 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 197 (1915)
Q Consensus 118 ~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~ 197 (1915)
+..+|..||+.|++|+.++||+.||+...+|+||++|++||||+||++||.++.|.|+++|..||+|||.||+.||+++
T Consensus 2 ~~~~~~~il~~l~~~~~a~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~kl~~~~Y~s~~~f~~Dv~li~~Na~~yN~~~- 80 (101)
T cd05509 2 LYTQLKKVLDSLKNHKSAWPFLEPVDKEEAPDYYDVIKKPMDLSTMEEKLENGYYVTLEEFVADLKLIFDNCRLYNGPD- 80 (101)
T ss_pred hHHHHHHHHHHHHhCCCchhhcCCCChhhcCCHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC-
Confidence 5688999999999999999999999998999999999999999999999999999999999999999999999999976
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q psy9598 198 SKIYIMTTRLSEFAEEHLRRL 218 (1915)
Q Consensus 198 s~i~~~a~~l~~~f~~~~~~~ 218 (1915)
|.++.+|..|++.|+++++++
T Consensus 81 s~~~~~a~~l~~~f~~~~~~~ 101 (101)
T cd05509 81 TEYYKCANKLEKFFWKKLKEL 101 (101)
T ss_pred CHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999998864
No 151
>KOG0321|consensus
Probab=99.88 E-value=2.6e-21 Score=230.73 Aligned_cols=302 Identities=17% Similarity=0.213 Sum_probs=223.1
Q ss_pred EEEcC---CCCEEEEEECCCcEEEEECCCCcE------EEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q psy9598 482 VLFDK---LGEVIVTGADDLLIKLWRARDGKL------LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP 552 (1915)
Q Consensus 482 vafsp---dg~~LaTGs~Dg~I~IWd~~tg~~------~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~ 552 (1915)
+.|++ ....||.+..||.|.++|...... +..+..|.+.|.++.|-|....|++++.|.+|++||+.++.+
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l 134 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL 134 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence 55653 457899999999999999865432 345568999999999999778999999999999999999988
Q ss_pred EEE--eecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceecc-----------Ccc----ccccccC
Q psy9598 553 ISV--LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH-----------EPV----MFNERIR 615 (1915)
Q Consensus 553 ~~~--l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~-----------~~~----~~~~~~~ 615 (1915)
+.. +.||.+.|.+++|.|. +...|++|+.||.|.|||++-...-....+. .+. .......
T Consensus 135 ~G~~~~~GH~~SvkS~cf~~~---n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~k 211 (720)
T KOG0321|consen 135 VGGRLNLGHTGSVKSECFMPT---NPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWK 211 (720)
T ss_pred ecceeecccccccchhhhccC---CCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccc
Confidence 877 8999999999999995 4589999999999999999765411100000 000 1112233
Q ss_pred CCCCceEE---EEECCCCcEEEEEeC-CCeEEEEEecCCCC-----CceeEEeccC---CCCeeEEEEcCCCCEEEEEeC
Q psy9598 616 PGNAHILC---SSFSPGGLFLATGSG-DHHVRVYKMDGVDS-----PLGILEVEEH---SDKVDSIQWSHSHLRFVSGSR 683 (1915)
Q Consensus 616 ~~~~~V~~---l~fspdg~~Lasgs~-Dg~I~IwDl~~~~~-----~~~i~~l~~h---~~~V~sl~fspdg~~L~sgs~ 683 (1915)
++...|.+ +.+..|...||+++. |+.|+|||++.... +..+..+..| .-.+.++.....|.+|++.+.
T Consensus 212 A~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt 291 (720)
T KOG0321|consen 212 AASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT 291 (720)
T ss_pred cccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEec
Confidence 44455555 666678888888887 99999999975432 2222233334 346788888888999998889
Q ss_pred CCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc-eEEEeeC
Q psy9598 684 DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD-LVQVLKG 762 (1915)
Q Consensus 684 DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~-~i~~l~g 762 (1915)
|++|++|++.+....... ...+ .........-..+|++.+|++|+. |...++|.+.+.+ ....+.|
T Consensus 292 D~sIy~ynm~s~s~sP~~-----~~sg-------~~~~sf~vks~lSpd~~~l~SgSs-d~~ayiw~vs~~e~~~~~l~G 358 (720)
T KOG0321|consen 292 DNSIYFYNMRSLSISPVA-----EFSG-------KLNSSFYVKSELSPDDCSLLSGSS-DEQAYIWVVSSPEAPPALLLG 358 (720)
T ss_pred CCcEEEEeccccCcCchh-----hccC-------cccceeeeeeecCCCCceEeccCC-CcceeeeeecCccCChhhhhC
Confidence 999999998765421110 0000 001112233457899999999999 9999999998754 4667789
Q ss_pred CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 763 H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
|.-.|++++|.|..-.-++|++.|.+++||++..+-.
T Consensus 359 ht~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~ 395 (720)
T KOG0321|consen 359 HTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLE 395 (720)
T ss_pred cceEEEEEeeccccCCCceeeccCcceEEEeccCchh
Confidence 9999999999996666788899999999999966543
No 152
>KOG0647|consensus
Probab=99.88 E-value=7.8e-21 Score=209.58 Aligned_cols=259 Identities=17% Similarity=0.215 Sum_probs=210.0
Q ss_pred ccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEe
Q psy9598 448 YSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527 (1915)
Q Consensus 448 ~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafs 527 (1915)
..|+.|+++++|.........-+....|.++|.|++|+.+|..+++|+.|+.+++||+.+++ +..+..|.++|.++.|-
T Consensus 44 ~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv 122 (347)
T KOG0647|consen 44 AAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWV 122 (347)
T ss_pred EecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeeecccceeEEEEe
Confidence 36889999999987665444446777899999999999999999999999999999999995 45567799999999998
Q ss_pred CCCC--EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceecc
Q psy9598 528 NRNI--LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 605 (1915)
Q Consensus 528 pdg~--~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~ 605 (1915)
+... .|++||.|.+|+.||++...++.++. -...|.++..-. .+++.+..+..|.+|++..+.......
T Consensus 123 ~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~------pm~vVata~r~i~vynL~n~~te~k~~-- 193 (347)
T KOG0647|consen 123 PGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLY------PMAVVATAERHIAVYNLENPPTEFKRI-- 193 (347)
T ss_pred cCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccC------ceeEEEecCCcEEEEEcCCCcchhhhh--
Confidence 8765 89999999999999999999998886 345667766543 689999999999999998764322211
Q ss_pred CccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCC---------CeeEEEEcCCCC
Q psy9598 606 EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD---------KVDSIQWSHSHL 676 (1915)
Q Consensus 606 ~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~---------~V~sl~fspdg~ 676 (1915)
..+..-.+.|++...+....+.|+-.|.+.|..++... +..-+.+..|.. .|++|+|+|...
T Consensus 194 --------~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~-~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hg 264 (347)
T KOG0647|consen 194 --------ESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPN-PKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHG 264 (347)
T ss_pred --------cCcccceeeEEEEEecCCceEeeeecceEEEEecCCCC-ccCceeEEEeccCCCCCCceEEecceEeecccc
Confidence 12234678999999998888999999999999995432 245556677763 578899999999
Q ss_pred EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe
Q psy9598 677 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 741 (1915)
Q Consensus 677 ~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~ 741 (1915)
.|++++.||++.+||-.....+ .....+..+|+|.+|+.+|.+++.+.+
T Consensus 265 tlvTaGsDGtf~FWDkdar~kL----------------k~s~~~~qpItcc~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 265 TLVTAGSDGTFSFWDKDARTKL----------------KTSETHPQPITCCSFNRNGSIFAYALG 313 (347)
T ss_pred eEEEecCCceEEEecchhhhhh----------------hccCcCCCccceeEecCCCCEEEEEee
Confidence 9999999999999997654421 122347789999999999999998877
No 153
>cd05507 Bromo_brd8_like Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be a nuclear receptor coactivator. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.88 E-value=1.3e-22 Score=202.27 Aligned_cols=102 Identities=28% Similarity=0.476 Sum_probs=98.3
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCC
Q psy9598 1531 FNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQN 1610 (1915)
Q Consensus 1531 ~~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~ 1610 (1915)
..|++.|..+++.|++++.++||+.||+..++|+||++|++||||+||++||++|.|.++.+|..||+|||+||+.||++
T Consensus 2 ~~~~~~~~~il~~l~~~~~a~~F~~pV~~~~~p~Y~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~ 81 (104)
T cd05507 2 RAWKKAILLVYRTLASHRYASVFLKPVTEDIAPGYHSVVYRPMDLSTIKKNIENGTIRSTAEFQRDVLLMFQNAIMYNSS 81 (104)
T ss_pred hHHHHHHHHHHHHHHcCCCCHhhcCCCCccccCCHHHHhCCCcCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 1611 KRSKIYIMTTRLSEFAEEHLRRL 1633 (1915)
Q Consensus 1611 ~~s~i~~~a~~l~~~f~~~~~~~ 1633 (1915)
+ |.+|.+|..|++.|.++++.+
T Consensus 82 ~-s~v~~~A~~l~~~~~~~~~~~ 103 (104)
T cd05507 82 D-HDVYLMAVEMQREVMSQIQQL 103 (104)
T ss_pred C-CHHHHHHHHHHHHHHHHhhcc
Confidence 8 999999999999999888754
No 154
>cd05497 Bromo_Brdt_I_like Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.88 E-value=1.4e-22 Score=202.39 Aligned_cols=100 Identities=32% Similarity=0.585 Sum_probs=93.7
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCCCCC--CCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcC
Q psy9598 1532 NWKNECREVLETLWVCPDSEPFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609 (1915)
Q Consensus 1532 ~~~~~~~~ll~~l~~~~~s~~F~~pv~~~--~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~ 1609 (1915)
.++-.+..||..|++++.|+||+.|||.. ++||||+||++||||+||++||+++.|.++++|..||+|||.||+.||+
T Consensus 5 q~~~~~~~il~~l~~~~~s~~F~~PVd~~~~~~pdY~~iIk~PmDL~tI~~kL~~~~Y~s~~ef~~D~~li~~Na~~yN~ 84 (107)
T cd05497 5 QLQYLLKVVLKALWKHKFAWPFQQPVDAVKLNLPDYHKIIKTPMDLGTIKKRLENNYYWSASECIQDFNTMFTNCYIYNK 84 (107)
T ss_pred HHHHHHHHHHHHHHhCCcCccccCCCCcccccCCcHHHHHcCcccHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 34455678999999999999999999954 7999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q psy9598 1610 NKRSKIYIMTTRLSEFAEEHLRR 1632 (1915)
Q Consensus 1610 ~~~s~i~~~a~~l~~~f~~~~~~ 1632 (1915)
++ |.+|.+|..|+++|++++++
T Consensus 85 ~~-s~i~~~A~~l~~~f~~~l~~ 106 (107)
T cd05497 85 PG-DDVVLMAQTLEKLFLQKLAQ 106 (107)
T ss_pred CC-CHHHHHHHHHHHHHHHHHHc
Confidence 88 99999999999999999875
No 155
>cd05510 Bromo_SPT7_like Bromodomain; SPT7_like subfamily. SPT7 is a yeast protein that functions as a component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA, and SLIK. SAGA is involved in the RNA polymerase II-dependent transcriptional regulation of about 10% of all yeast genes. The SPT7 bromodomain has been shown to weakly interact with acetylated histone H3, but not H4. The human representative of this subfamily is cat eye syndrome critical region protein 2 (CECR2). Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=1.2e-22 Score=203.69 Aligned_cols=105 Identities=29% Similarity=0.449 Sum_probs=99.5
Q ss_pred chhhHHHHHHHHHHHHcC-CCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhc
Q psy9598 1530 PFNWKNECREVLETLWVC-PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608 (1915)
Q Consensus 1530 ~~~~~~~~~~ll~~l~~~-~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN 1608 (1915)
..++.++|.+||+.|+++ +.|+||+.||++.++||||++|++||||+||++||++|.|.|+++|.+||+|||.||+.||
T Consensus 5 ~~~~~~~~~~il~~l~~~~~~s~~F~~pv~~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~s~~ef~~D~~Li~~N~~~yN 84 (112)
T cd05510 5 QEEFYESLDKVLNELKTYTEHSTPFLTKVSKREAPDYYDIIKKPMDLGTMLKKLKNLQYKSKAEFVDDLNLIWKNCLLYN 84 (112)
T ss_pred HHHHHHHHHHHHHHHHhcCccccchhcCCChhhcCCHHHHhcCccCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 467889999999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1609 QNKRSKIYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1609 ~~~~s~i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
+++++.++.+|..|++.|+.++..|+
T Consensus 85 ~~~s~~~~~~A~~l~~~~~~~~~~~~ 110 (112)
T cd05510 85 SDPSHPLRRHANFMKKKAEHLLKLIP 110 (112)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 98745889999999999999998774
No 156
>cd05506 Bromo_plant1 Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=1.4e-22 Score=201.48 Aligned_cols=96 Identities=33% Similarity=0.545 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCC--CCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q psy9598 119 KNECREVLETLWVCPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196 (1915)
Q Consensus 119 ~~~~~~il~~l~~~~~~~~F~~pvd~--~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~ 196 (1915)
++.|..||+.|++++.+++|..||+. .++|+||++|++||||+||++||+++.|.++++|.+||+|||.||+.||+++
T Consensus 2 ~~~c~~il~~l~~~~~~~~F~~pv~~~~~~~p~Y~~~I~~P~dl~tI~~kL~~~~Y~s~~ef~~D~~li~~Na~~yn~~~ 81 (99)
T cd05506 2 MKQCGTLLRKLMKHKWGWVFNAPVDVVALGLPDYFDIIKKPMDLGTVKKKLEKGEYSSPEEFAADVRLTFANAMRYNPPG 81 (99)
T ss_pred HHHHHHHHHHHHhCCCCccccCCCCccccCCCCHHHHHcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 57899999999999999999999994 4799999999999999999999999999999999999999999999999976
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy9598 197 RSKIYIMTTRLSEFAEEHL 215 (1915)
Q Consensus 197 ~s~i~~~a~~l~~~f~~~~ 215 (1915)
|.+|.+|..|++.|+++|
T Consensus 82 -s~i~~~a~~l~~~fe~~w 99 (99)
T cd05506 82 -NDVHTMAKELLKIFETRW 99 (99)
T ss_pred -CHHHHHHHHHHHHHHHhC
Confidence 999999999999999986
No 157
>cd05513 Bromo_brd7_like Bromodomain, brd7_like subgroup. The BRD7 gene encodes a nuclear protein that has been shown to inhibit cell growth and the progression of the cell cycle by regulating cell-cycle genes at the transcriptional level. BRD7 has been identified as a gene involved in nasopharyngeal carcinoma. The protein interacts with acetylated histone H3 via its bromodomain. Bromodomains are 110 amino acid long domains that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=1.6e-22 Score=197.75 Aligned_cols=95 Identities=23% Similarity=0.403 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q psy9598 117 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~ 196 (1915)
++++.|..||+.|++++.+++|+.||+...+||||++|++||||+||++||+++.|.|+++|.+||+|||.||++||+++
T Consensus 1 ~l~~~l~~il~~l~~~~~~~~F~~PV~~~~~pdY~~vIk~PmDL~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~yN~~~ 80 (98)
T cd05513 1 PLQKALEQLIRQLQRKDPHGFFAFPVTDFIAPGYSSIIKHPMDFSTMKEKIKNNDYQSIEEFKDDFKLMCENAMKYNKPD 80 (98)
T ss_pred CHHHHHHHHHHHHHcCCccccccCcCCccccccHHHHHcCccCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred CCHHHHHHHHHHHHHH
Q psy9598 197 RSKIYIMTTRLSEFAE 212 (1915)
Q Consensus 197 ~s~i~~~a~~l~~~f~ 212 (1915)
|.+|++|.+|...-.
T Consensus 81 -s~~~~~A~~L~~~~~ 95 (98)
T cd05513 81 -TIYYKAAKKLLHSGM 95 (98)
T ss_pred -CHHHHHHHHHHHhhh
Confidence 999999999976543
No 158
>KOG0650|consensus
Probab=99.87 E-value=8.2e-21 Score=224.47 Aligned_cols=320 Identities=17% Similarity=0.194 Sum_probs=231.2
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCC--EEEEEeCCCcEEEEEC
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI--LLAAGTVDKTIRIWNL 547 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~--~LaSgs~DgtIrVWDl 547 (1915)
..+.||++.|.||..+|.|.+||+|+.||+|+||.+.||.|+.++. ..+.|.||+|+|.+. +||++- ...+.|-+.
T Consensus 394 lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~-~~~~~ivnp 471 (733)
T KOG0650|consen 394 LVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAV-GECVLIVNP 471 (733)
T ss_pred eeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEe-cCceEEeCc
Confidence 4678999999999999999999999999999999999999999887 456899999999754 445444 334555554
Q ss_pred CCCceEEEeecCCCCeEEEEeccCccCCCcEEEEE----eCCCeEEEEecccCccccceeccCccccccccCCCCCceEE
Q psy9598 548 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST----STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 623 (1915)
Q Consensus 548 ~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg----s~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 623 (1915)
.-|..+.... + ..+|+++ .-++.+..|.-......... ......|...|..
T Consensus 472 ~~G~~~e~~~--t---------------~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~--------v~~~I~~~k~i~~ 526 (733)
T KOG0650|consen 472 IFGDRLEVGP--T---------------KELLASAPNESEPDAAVVTWSRASLDELEKG--------VCIVIKHPKSIRQ 526 (733)
T ss_pred cccchhhhcc--h---------------hhhhhcCCCccCCcccceeechhhhhhhccc--------eEEEEecCCccce
Confidence 3332111100 0 0122222 23556777754422111100 0111235578999
Q ss_pred EEECCCCcEEEEEeCC---CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEe
Q psy9598 624 SSFSPGGLFLATGSGD---HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFI 700 (1915)
Q Consensus 624 l~fspdg~~Lasgs~D---g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~ 700 (1915)
+.|+..|.+|++...+ ..|.|+++...... ..+.-..+.|.++.|+|...+|++++. ..|+|||+..+..+.
T Consensus 527 vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ---~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvK- 601 (733)
T KOG0650|consen 527 VTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQ---SPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVK- 601 (733)
T ss_pred eeeecCCceEEEeccCCCcceEEEEeccccccc---CchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHH-
Confidence 9999999999987664 46889998543322 234445678999999999999988876 679999998654221
Q ss_pred eecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC-CceEEEeeCCCCCeEEEEEccCCCCE
Q psy9598 701 RLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRV 779 (1915)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~ 779 (1915)
........|..++++|.|..|++++. |+.+..||+.- .++.+++.-|...|++|+||+ .-.+
T Consensus 602 ---------------kL~tg~kwiS~msihp~GDnli~gs~-d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~-ryPL 664 (733)
T KOG0650|consen 602 ---------------KLLTGSKWISSMSIHPNGDNLILGSY-DKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHK-RYPL 664 (733)
T ss_pred ---------------HHhcCCeeeeeeeecCCCCeEEEecC-CCeeEEEEcccCcchhHHhhhhhhhhhhhhhcc-ccce
Confidence 12234567899999999999999998 99999999974 467888999999999999999 8889
Q ss_pred EEEEecCceEEEEECCC------CccccceeeeeeecCC---CCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy9598 780 LLSAGHDGLIIIWDILS------SKQRGYKWFHNIVEGQ---GEGALFDGKWSPDGTTCALTDSYGHLLVY 841 (1915)
Q Consensus 780 LaSgs~DG~I~IWdl~s------~~~~~~~~~~~~~~~~---~~~~V~~vafSpdg~~Lasg~~dG~I~Iw 841 (1915)
|++|+.||++.|+.-.- .-. +..+. .+.++ ....|.++.|+|...+|++++.||+|++|
T Consensus 665 fas~sdDgtv~Vfhg~VY~Dl~qnpl--iVPlK-~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 665 FASGSDDGTVIVFHGMVYNDLLQNPL--IVPLK-RLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eeeecCCCcEEEEeeeeehhhhcCCc--eEeee-eccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 99999999999985321 111 12221 12222 12458999999999999999999999998
No 159
>KOG1538|consensus
Probab=99.87 E-value=1.8e-20 Score=221.93 Aligned_cols=273 Identities=18% Similarity=0.331 Sum_probs=218.4
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe-
Q psy9598 478 AVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL- 556 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l- 556 (1915)
.|+.++|-|||..|+.+..+ .+.|||+..|.++.+++||...|+|++|+.||..+|||+.|..|.||+-.- -..+
T Consensus 14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl---EG~Lk 89 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL---EGILK 89 (1081)
T ss_pred chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccc---cceee
Confidence 89999999999998888655 899999999999999999999999999999999999999999999998642 2222
Q ss_pred ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEE
Q psy9598 557 VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 636 (1915)
Q Consensus 557 ~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasg 636 (1915)
..|.+.|.|+.|+|.. +.|++++-. ..-+|......... . .....+.|++|..||.+|+.|
T Consensus 90 YSH~D~IQCMsFNP~~----h~LasCsLs-dFglWS~~qK~V~K-~-------------kss~R~~~CsWtnDGqylalG 150 (1081)
T KOG1538|consen 90 YSHNDAIQCMSFNPIT----HQLASCSLS-DFGLWSPEQKSVSK-H-------------KSSSRIICCSWTNDGQYLALG 150 (1081)
T ss_pred eccCCeeeEeecCchH----HHhhhcchh-hccccChhhhhHHh-h-------------hhheeEEEeeecCCCcEEEEe
Confidence 3699999999999965 788888764 35678655432111 1 123678999999999999999
Q ss_pred eCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-----CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCC
Q psy9598 637 SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-----LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHT 711 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-----~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~ 711 (1915)
-.+|+|.|-+-. ......+....|.+.+|++|+|+|.. ..+++.....++.++.+.....
T Consensus 151 ~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~I-------------- 215 (1081)
T KOG1538|consen 151 MFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQI-------------- 215 (1081)
T ss_pred ccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceee--------------
Confidence 999999998763 23334444556678899999999874 3677777777777776653321
Q ss_pred ccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEE
Q psy9598 712 KETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIII 791 (1915)
Q Consensus 712 ~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~I 791 (1915)
...........|+.+.++|.|++.|++ |+.+++|. +.|-.+.++.....+|+.++.+| ++..++.|+.||+|-.
T Consensus 216 ---gk~r~L~FdP~CisYf~NGEy~LiGGs-dk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~P-NsQ~v~~GCqDGTiAC 289 (1081)
T KOG1538|consen 216 ---GKDRALNFDPCCISYFTNGEYILLGGS-DKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKP-NSQYVVVGCQDGTIAC 289 (1081)
T ss_pred ---cccccCCCCchhheeccCCcEEEEccC-CCceEEEe-ecCeEEeeccccceeEEEEEEcc-CCceEEEEEccCeeeh
Confidence 111223344568899999999999999 99999986 46778888877888999999999 9999999999999999
Q ss_pred EEC
Q psy9598 792 WDI 794 (1915)
Q Consensus 792 Wdl 794 (1915)
|++
T Consensus 290 yNl 292 (1081)
T KOG1538|consen 290 YNL 292 (1081)
T ss_pred hhh
Confidence 886
No 160
>KOG0264|consensus
Probab=99.87 E-value=5.2e-21 Score=222.54 Aligned_cols=267 Identities=20% Similarity=0.337 Sum_probs=210.4
Q ss_pred cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEEEEE
Q psy9598 558 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFLATG 636 (1915)
Q Consensus 558 ~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~Lasg 636 (1915)
.|.+.|+.+.+.|. +..++++++..+.|.|||............ .......+.+|...-++++|++. ...|++|
T Consensus 122 ~h~gEVnRaRymPQ---np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~--~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQ---NPNIVATKTSSGDVYVFDYTKHPSKPKASG--ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred cCCccchhhhhCCC---CCcEEEecCCCCCEEEEEeccCCCcccccc--cCCCceEEEeecccccccccccccceeEeec
Confidence 59999999999995 458899999999999999876543322211 22233355667666788999985 3479999
Q ss_pred eCCCeEEEEEecCCCC----CceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCC
Q psy9598 637 SGDHHVRVYKMDGVDS----PLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHT 711 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~----~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~ 711 (1915)
+.|+.|.+||+..... ......+.+|...|..++|++-. .+|++++.|+.+.|||++++. .
T Consensus 197 ~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~--------------~ 262 (422)
T KOG0264|consen 197 SDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT--------------S 262 (422)
T ss_pred cCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCC--------------C
Confidence 9999999999965433 34455688999999999999864 478899999999999999632 1
Q ss_pred ccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC-CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEE
Q psy9598 712 KETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLII 790 (1915)
Q Consensus 712 ~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~ 790 (1915)
........|...|+|++|+|-+.+|+++++.|++|.+||+++ ..+++++.+|...|++|.|+|....+|||+|.|+.+.
T Consensus 263 ~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~ 342 (422)
T KOG0264|consen 263 KPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLN 342 (422)
T ss_pred CCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEE
Confidence 122334568999999999998887777666699999999997 4679999999999999999998899999999999999
Q ss_pred EEECCCCcccccee---------eeeeecCCCCcceEEEEEcCCCC-EEEEEeCCCeEEEEeCCC
Q psy9598 791 IWDILSSKQRGYKW---------FHNIVEGQGEGALFDGKWSPDGT-TCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 791 IWdl~s~~~~~~~~---------~~~~~~~~~~~~V~~vafSpdg~-~Lasg~~dG~I~Iwdl~s 845 (1915)
|||+..-.. .+. =.-++.++|.+.|.++.|+|... .|++++.|+.+.||.+..
T Consensus 343 vWDls~ig~--eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 343 VWDLSRIGE--EQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EEecccccc--ccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 999965322 110 00145678889999999999765 577889999999999874
No 161
>cd05528 Bromo_AAA Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this alignment is an uncharacterized protein predicted from analysis of cDNA clones from human fetal liver
Probab=99.87 E-value=2.8e-22 Score=201.33 Aligned_cols=103 Identities=29% Similarity=0.422 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q psy9598 117 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~ 196 (1915)
+++..|..|++.|++++.++||.+|||..++||||++|++||||+||++||++++|.|+++|.+||+|||.||+.||+++
T Consensus 3 ~lr~~L~~il~~l~~~~~~~~F~~pv~~~~~pdY~~vI~~PmdL~tI~~kl~~~~Y~s~~ef~~Dv~li~~Na~~yN~~~ 82 (112)
T cd05528 3 ELRLFLRDVLKRLASDKRFNAFTKPVDEEEVPDYYEIIKQPMDLQTILQKLDTHQYLTAKDFLKDIDLIVTNALEYNPDR 82 (112)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCccccCcHHHHHcCCCCHHHHHHHHcCCCcCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred ---CCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 197 ---RSKIYIMTTRLSEFAEEHLRRLT 219 (1915)
Q Consensus 197 ---~s~i~~~a~~l~~~f~~~~~~~~ 219 (1915)
++.|+.+|..|++.|.+++..+.
T Consensus 83 s~~~s~i~~~A~~L~~~~~~~~~~~~ 108 (112)
T cd05528 83 DPADKLIRSRACELRDEVHAMIEAEL 108 (112)
T ss_pred CccccHHHHHHHHHHHHHHHHHHhcC
Confidence 37999999999999999988764
No 162
>cd05499 Bromo_BDF1_2_II Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat II. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=2.2e-22 Score=200.88 Aligned_cols=96 Identities=34% Similarity=0.629 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHhcC---CCCCCCCCCCCCC--CCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhc
Q psy9598 119 KNECREVLETLWVC---PDSEPFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 193 (1915)
Q Consensus 119 ~~~~~~il~~l~~~---~~~~~F~~pvd~~--~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN 193 (1915)
.+.|..||+.|+++ +.++||+.|||.. ++||||++|++||||+||++||+++.|.++++|..||+|||.||+.||
T Consensus 2 ~~~c~~Il~~l~~~~~~~~s~~F~~pvd~~~~~~pdY~~~I~~P~dL~~I~~kl~~~~Y~s~~ef~~D~~li~~N~~~yn 81 (102)
T cd05499 2 LKFCEEVLKELMKPKHSAYNWPFLDPVDPVALNIPNYFSIIKKPMDLGTISKKLQNGQYQSAKEFERDVRLIFKNCYTFN 81 (102)
T ss_pred hHHHHHHHHHHHcccCCcccchhcCCCCccccCCCCHHHHhcCCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 36799999999994 5699999999976 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy9598 194 QNKRSKIYIMTTRLSEFAEEHL 215 (1915)
Q Consensus 194 ~~~~s~i~~~a~~l~~~f~~~~ 215 (1915)
+++ |.+|.+|..|++.|+++|
T Consensus 82 ~~~-s~~~~~a~~l~~~fe~~~ 102 (102)
T cd05499 82 PEG-TDVYMMGHQLEEVFNDKW 102 (102)
T ss_pred CCC-CHHHHHHHHHHHHHHHhC
Confidence 977 999999999999999876
No 163
>cd05498 Bromo_Brdt_II_like Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=2.6e-22 Score=200.66 Aligned_cols=96 Identities=32% Similarity=0.568 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHhcC---CCCCCCCCCCCC--CCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhc
Q psy9598 119 KNECREVLETLWVC---PDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 193 (1915)
Q Consensus 119 ~~~~~~il~~l~~~---~~~~~F~~pvd~--~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN 193 (1915)
++.|..||+.|+++ +.++||+.||+. .++||||++|++||||+||++||.++.|.++++|..||+|||.||+.||
T Consensus 2 ~~~c~~il~~l~~~~~~~~a~~F~~pv~~~~~~~p~Y~~~I~~Pmdl~~I~~kl~~~~Y~s~~ef~~D~~li~~Na~~yn 81 (102)
T cd05498 2 LKFCSGILKELFSKKHKAYAWPFYKPVDPEALGLHDYHDIIKHPMDLSTIKKKLDNREYADAQEFAADVRLMFSNCYKYN 81 (102)
T ss_pred hhHHHHHHHHHHhCCCccccCcccCcCCccccCCCcHHHHccCCCcHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 57899999999999 889999999994 4799999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy9598 194 QNKRSKIYIMTTRLSEFAEEHL 215 (1915)
Q Consensus 194 ~~~~s~i~~~a~~l~~~f~~~~ 215 (1915)
+++ |.++.+|..|++.|+++|
T Consensus 82 ~~~-s~i~~~a~~l~~~fe~~~ 102 (102)
T cd05498 82 PPD-HPVHAMARKLQDVFEDRW 102 (102)
T ss_pred CCC-CHHHHHHHHHHHHHHHhC
Confidence 977 999999999999999886
No 164
>cd05504 Bromo_Acf1_like Bromodomain; Acf1_like or BAZ1A_like subfamily. Bromo adjacent to zinc finger 1A (BAZ1A) was identified as a novel human bromodomain gene by cDNA library screening. The Drosophila homologue, Acf1, is part of the CHRAC (chromatin accessibility complex) and regulates ISWI-induced nucleosome remodeling. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=3.4e-22 Score=202.25 Aligned_cols=101 Identities=36% Similarity=0.570 Sum_probs=97.2
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCC
Q psy9598 1532 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611 (1915)
Q Consensus 1532 ~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~ 1611 (1915)
.....|.+||..|++++.++||+.||+..++||||++|++||||+||++||+.|.|.|+++|..||+|||.||++||+++
T Consensus 12 ~~~~~c~~il~~l~~~~~s~~F~~pvd~~~~pdY~~vI~~PmDL~tI~~kL~~~~Y~s~~~f~~Dv~LI~~Na~~yN~~~ 91 (115)
T cd05504 12 LNLSALEQLLVEIVKHKDSWPFLRPVSKIEVPDYYDIIKKPMDLGTIKEKLNMGEYKLAEEFLSDIQLVFSNCFLYNPEH 91 (115)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCccccccHHHHhcCcccHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 34467999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q psy9598 1612 RSKIYIMTTRLSEFAEEHLRRL 1633 (1915)
Q Consensus 1612 ~s~i~~~a~~l~~~f~~~~~~~ 1633 (1915)
|.+|.+|..|+++|+++++++
T Consensus 92 -s~i~~~A~~l~~~f~~~~~~~ 112 (115)
T cd05504 92 -TSVYKAGTRLQRFFIKRCRKL 112 (115)
T ss_pred -CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999876
No 165
>cd05503 Bromo_BAZ2A_B_like Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting protein 5) and hWALp3. The proteins may play roles in transcriptional regulation. Human Tip5 is part of a complex termed NoRC (nucleolar remodeling complex), which induces nucleosome sliding and may play a role in the regulation of the rDNA locus. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=2.8e-22 Score=197.53 Aligned_cols=95 Identities=32% Similarity=0.578 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCH
Q psy9598 1535 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSK 1614 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~ 1614 (1915)
..|.+||+.|++++.++||+.||+...+|+||++|++||||+||++||++|.|.|+++|..||+|||.||+.||+++ |.
T Consensus 3 ~~c~~il~~l~~~~~~~~F~~pv~~~~~p~Y~~iIk~PmdL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~~-s~ 81 (97)
T cd05503 3 ALCETILDEMEAHEDAWPFLEPVNTKLVPGYRKIIKKPMDFSTIREKLESGQYKTLEEFAEDVRLVFDNCETFNEDD-SE 81 (97)
T ss_pred HHHHHHHHHHHcCCCchhhcCCCCccccCCHHHHhCCCCCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHCCCC-CH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999987 99
Q ss_pred HHHHHHHHHHHHHHHH
Q psy9598 1615 IYIMTTRLSEFAEEHL 1630 (1915)
Q Consensus 1615 i~~~a~~l~~~f~~~~ 1630 (1915)
+|.+|..|+++|+++|
T Consensus 82 i~~~a~~l~~~f~~~~ 97 (97)
T cd05503 82 VGRAGHNMRKFFEKRW 97 (97)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999875
No 166
>cd05516 Bromo_SNF2L2 Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone receptors to boost transcriptional activation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.87 E-value=2.6e-22 Score=200.81 Aligned_cols=101 Identities=22% Similarity=0.398 Sum_probs=96.1
Q ss_pred hhHHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhh
Q psy9598 1532 NWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSR 1605 (1915)
Q Consensus 1532 ~~~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~ 1605 (1915)
++.++|..||+.|+++.+ ++||..||++.++||||++|++||||+||++||.+|.|.++++|..||.|||.||+
T Consensus 1 ~l~~~~~~il~~v~~~~d~~g~~~s~~F~~~p~~~~~pdYy~iI~~Pmdl~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~ 80 (107)
T cd05516 1 ELTKKMNKIVDVVIKYKDSDGRQLAEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLEDLEKDVMLLCQNAQ 80 (107)
T ss_pred CHHHHHHHHHHHHHhhhCcCCCEeeHHhhcCCCcccCCCHHHHcCCCCCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence 367889999999999887 89999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 1606 NYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633 (1915)
Q Consensus 1606 ~yN~~~~s~i~~~a~~l~~~f~~~~~~~ 1633 (1915)
.||+++ |.||.+|..|+++|+++++++
T Consensus 81 ~yN~~~-s~i~~~a~~l~~~f~~~~~~~ 107 (107)
T cd05516 81 TFNLEG-SLIYEDSIVLQSVFKSARQKI 107 (107)
T ss_pred HHCCCC-CHHHHHHHHHHHHHHHHHhcC
Confidence 999988 999999999999999998753
No 167
>cd05512 Bromo_brd1_like Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. Bromodomains are 110 amino acid long domains that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.86 E-value=4e-22 Score=195.67 Aligned_cols=93 Identities=29% Similarity=0.463 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q psy9598 118 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 197 (1915)
Q Consensus 118 ~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~ 197 (1915)
|...|+.+|..|++++.+++|++|||..++||||++|++||||+||++||.++.|.|+++|..||+|||.||+.||+++
T Consensus 2 ~~~~l~~il~~l~~~~~~~~F~~pVd~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~~- 80 (98)
T cd05512 2 LEVLLRKTLDQLQEKDTAEIFSEPVDLSEVPDYLDHIKQPMDFSTMRKKLESQRYRTLEDFEADFNLIINNCLAYNAKD- 80 (98)
T ss_pred HHHHHHHHHHHHHhCCCchhhcCCCCccccCCHHHHhcCCcCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCCC-
Confidence 5677999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CHHHHHHHHHHHHH
Q psy9598 198 SKIYIMTTRLSEFA 211 (1915)
Q Consensus 198 s~i~~~a~~l~~~f 211 (1915)
|.+|++|.+|++.-
T Consensus 81 s~~~~~A~~l~~~~ 94 (98)
T cd05512 81 TIFYRAAVRLRDQG 94 (98)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999998753
No 168
>cd05500 Bromo_BDF1_2_I Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat I. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.86 E-value=7.2e-22 Score=197.10 Aligned_cols=99 Identities=31% Similarity=0.470 Sum_probs=93.6
Q ss_pred hhHHHHHHHHHHHHhcCCCCCCCCCCCCC--CCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhc
Q psy9598 116 FNWKNECREVLETLWVCPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 193 (1915)
Q Consensus 116 ~~~~~~~~~il~~l~~~~~~~~F~~pvd~--~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN 193 (1915)
..+.++|..||+.|++++.++||..|||. .++||||++|++||||+||++||.++.|.++.+|..||+|||.||+.||
T Consensus 3 ~~~~~~~~~ii~~l~~~~~a~~F~~pv~~~~~~~p~Y~~~I~~P~dL~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~yN 82 (103)
T cd05500 3 KHQHKFLLSSIRSLKRLKDARPFLVPVDPVKLNIPHYPTIIKKPMDLGTIERKLKSNVYTSVEEFTADFNLMVDNCLTFN 82 (103)
T ss_pred HHHHHHHHHHHHHHHcCCCChhhcCCCCcccccCCCHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 35678999999999999999999999994 5899999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy9598 194 QNKRSKIYIMTTRLSEFAEEHL 215 (1915)
Q Consensus 194 ~~~~s~i~~~a~~l~~~f~~~~ 215 (1915)
+++ |.++.+|..|++.|++.+
T Consensus 83 ~~~-s~~~~~A~~l~~~fe~~~ 103 (103)
T cd05500 83 GPE-HPVSQMGKRLQAAFEKHL 103 (103)
T ss_pred CCC-CHHHHHHHHHHHHHHHhC
Confidence 976 999999999999999853
No 169
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.86 E-value=3.1e-19 Score=216.00 Aligned_cols=276 Identities=13% Similarity=0.105 Sum_probs=202.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEE-EEEeCCCeEEEEecccCccccceeccCcc
Q psy9598 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYL-ASTSTDGCIGFWKYKLDIDISKTVFHEPV 608 (1915)
Q Consensus 530 g~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L-~sgs~DgtI~iWDl~~~~~~~~~~~~~~~ 608 (1915)
+.+++|++.|+.|++||+.+++.+..+.+|.. +.+++|+|++ ..+ ++++.++.|.+||+.++.....+.
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg----~~l~~~~~~~~~v~~~d~~~~~~~~~~~----- 70 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDG----KLLYVCASDSDTIQVIDLATGEVIGTLP----- 70 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCC----CEEEEEECCCCeEEEEECCCCcEEEecc-----
Confidence 35788999999999999999999888876654 6789999843 554 677889999999998765322211
Q ss_pred ccccccCCCCCceEEEEECCCCcEEEEE-eCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC-c
Q psy9598 609 MFNERIRPGNAHILCSSFSPGGLFLATG-SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG-T 686 (1915)
Q Consensus 609 ~~~~~~~~~~~~V~~l~fspdg~~Lasg-s~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG-~ 686 (1915)
.+ ..+..++|+|+++.++++ +.++.|++||+.. ...+..+. +...+.+++|+|+|.+|++++.++ .
T Consensus 71 -------~~-~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~---~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~ 138 (300)
T TIGR03866 71 -------SG-PDPELFALHPNGKILYIANEDDNLVTVIDIET---RKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNM 138 (300)
T ss_pred -------CC-CCccEEEECCCCCEEEEEcCCCCeEEEEECCC---CeEEeEee-CCCCcceEEECCCCCEEEEEecCCCe
Confidence 11 234678999999877654 5689999999943 23333333 234468899999999999988875 4
Q ss_pred EEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCC-
Q psy9598 687 ALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN- 765 (1915)
Q Consensus 687 I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~- 765 (1915)
+.+||..++....... ....+.+++|++++.+|++++..++.|++||+.+++++..+..+..
T Consensus 139 ~~~~d~~~~~~~~~~~-----------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~ 201 (300)
T TIGR03866 139 AHFIDTKTYEIVDNVL-----------------VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPG 201 (300)
T ss_pred EEEEeCCCCeEEEEEE-----------------cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccc
Confidence 6677887665332110 1123456899999999877665589999999999988877653321
Q ss_pred ------CeEEEEEccCCCCEEEE-EecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEe-CCCe
Q psy9598 766 ------EVFVLESHPFDSRVLLS-AGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTD-SYGH 837 (1915)
Q Consensus 766 ------~V~sl~~sp~dg~~LaS-gs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~-~dG~ 837 (1915)
....++|+| ++.++++ .+.++.|.+||+.+++. ...+. +...+.+++|+|+|.+|+++. .+|.
T Consensus 202 ~~~~~~~~~~i~~s~-dg~~~~~~~~~~~~i~v~d~~~~~~--~~~~~------~~~~~~~~~~~~~g~~l~~~~~~~~~ 272 (300)
T TIGR03866 202 VHPEAVQPVGIKLTK-DGKTAFVALGPANRVAVVDAKTYEV--LDYLL------VGQRVWQLAFTPDEKYLLTTNGVSND 272 (300)
T ss_pred cccccCCccceEECC-CCCEEEEEcCCCCeEEEEECCCCcE--EEEEE------eCCCcceEEECCCCCEEEEEcCCCCe
Confidence 234688999 7776544 45677899999988766 33322 234688999999999998874 6899
Q ss_pred EEEEeCCCCcccccCC
Q psy9598 838 LLVYGLGGFKRPQNIP 853 (1915)
Q Consensus 838 I~Iwdl~s~~~~~~l~ 853 (1915)
|.|||+.+++++..++
T Consensus 273 i~v~d~~~~~~~~~~~ 288 (300)
T TIGR03866 273 VSVIDVAALKVIKSIK 288 (300)
T ss_pred EEEEECCCCcEEEEEE
Confidence 9999999988776664
No 170
>cd05501 Bromo_SP100C_like Bromodomain, SP100C_like subfamily. The SP100C protein is a splice variant of SP100, a major component of PML-SP100 nuclear bodies (NBs), which are poorly understood. It is covalently modified by SUMO-1 and may play a role in processes at the chromatin level. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.86 E-value=1.2e-21 Score=190.76 Aligned_cols=96 Identities=21% Similarity=0.342 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCH
Q psy9598 1535 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSK 1614 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~ 1614 (1915)
..|++||.+|+.+++|++|..+ +..+||||++||+||||+||++||.+|+|.|+++|..||+|||+||++||+++ .
T Consensus 5 ~~ce~il~~l~~~~~s~~f~~~--p~~~pdY~~iIk~PMDL~tI~~kL~~~~Y~s~~ef~~D~~Lif~N~~~yN~~~--~ 80 (102)
T cd05501 5 LKCEFLLLKVYCMSKSGFFISK--PYYIRDYCQGIKEPMWLNKVKERLNERVYHTVEGFVRDMRLIFHNHKLFYKDD--D 80 (102)
T ss_pred HHHHHHHHHHHhCcccccccCC--CCCCCchHHHcCCCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHcCCC--H
Confidence 4599999999999999999664 35899999999999999999999999999999999999999999999999875 8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy9598 1615 IYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1615 i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
++.+|..|++.|+++++++.
T Consensus 81 ~~~~a~~L~~~Fek~~~~~f 100 (102)
T cd05501 81 FGQVGITLEKKFEKNFKEVF 100 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998875
No 171
>KOG2055|consensus
Probab=99.86 E-value=4.6e-20 Score=213.33 Aligned_cols=289 Identities=13% Similarity=0.121 Sum_probs=229.0
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCC--CcEEEEEeCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCce
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARD--GKLLATLRGCSGEISDIAIDNRNI-LLAAGTVDKTIRIWNLQTLAP 552 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t--g~~~~~l~gH~~~I~~Lafspdg~-~LaSgs~DgtIrVWDl~tg~~ 552 (1915)
.+.|+||.|+|...+|++|+.||+++||.+.. ...++.+.--..+|.+++|.|+|. .+++++.-..+++||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 37899999999999999999999999998743 346777776788999999999999 899999999999999998765
Q ss_pred E--EEeecCC-CCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC
Q psy9598 553 I--SVLVGHQ-GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629 (1915)
Q Consensus 553 ~--~~l~~h~-~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd 629 (1915)
. ..+.++. ..+.....+++ +++|+..+..|.|.+....++..+..+... +.|..++|+.+
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd----~~fia~~G~~G~I~lLhakT~eli~s~Kie-------------G~v~~~~fsSd 355 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHD----SNFIAIAGNNGHIHLLHAKTKELITSFKIE-------------GVVSDFTFSSD 355 (514)
T ss_pred ccccCCCCcccchhheeEecCC----CCeEEEcccCceEEeehhhhhhhhheeeec-------------cEEeeEEEecC
Confidence 3 3344544 35667777884 489999999999999999998877766665 78999999999
Q ss_pred CcEEEEEeCCCeEEEEEecCCCCCceeEEeccC-CCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccC
Q psy9598 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH-SDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708 (1915)
Q Consensus 630 g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h-~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~ 708 (1915)
|..|++++.+|.|.+||++. ..++..+... .-.-+++|.+++|.+||+||..|.|.|||..+... .
T Consensus 356 sk~l~~~~~~GeV~v~nl~~---~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~----------s 422 (514)
T KOG2055|consen 356 SKELLASGGTGEVYVWNLRQ---NSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFA----------S 422 (514)
T ss_pred CcEEEEEcCCceEEEEecCC---cceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhc----------c
Confidence 99999999999999999943 3444444221 12346778889999999999999999998764320 1
Q ss_pred CCCccccccccccccEEEEEECCCCCEEEEEEe-cCCeEEEEECCCCceEEEeeCC---CCCeEEEEEccCCCCEEEEEe
Q psy9598 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAIN-FNFQIKIWDAFNGDLVQVLKGH---TNEVFVLESHPFDSRVLLSAG 784 (1915)
Q Consensus 709 ~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~-~Dg~I~vwD~~tg~~i~~l~gH---~~~V~sl~~sp~dg~~LaSgs 784 (1915)
....+..........|+++.|++++..|+.++. ....+++-.+.+......+... -+.|+|++|+| .+.+||.|.
T Consensus 423 ~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP-~sG~lAvGN 501 (514)
T KOG2055|consen 423 TNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSP-NSGYLAVGN 501 (514)
T ss_pred CCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecC-CCceEEeec
Confidence 111223334456678999999999999988774 3567888888776666555433 34689999999 999999999
Q ss_pred cCceEEEEECC
Q psy9598 785 HDGLIIIWDIL 795 (1915)
Q Consensus 785 ~DG~I~IWdl~ 795 (1915)
.+|.|.+|.+.
T Consensus 502 e~grv~l~kL~ 512 (514)
T KOG2055|consen 502 EAGRVHLFKLH 512 (514)
T ss_pred CCCceeeEeec
Confidence 99999999874
No 172
>cd05511 Bromo_TFIID Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to acetylated histone H4. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.85 E-value=1.2e-21 Score=197.44 Aligned_cols=104 Identities=35% Similarity=0.487 Sum_probs=98.8
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCH
Q psy9598 120 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSK 199 (1915)
Q Consensus 120 ~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s~ 199 (1915)
..++.|+.+|++++.++||+.||++..+|+||++|++||||+||++||.++.|.++++|..||+|||.||+.||+++ |.
T Consensus 3 ~~l~~ii~~l~~~~~s~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~kl~~~~Y~s~~ef~~Dv~li~~Na~~yN~~~-s~ 81 (112)
T cd05511 3 FILDEIVNELKNLPDSWPFHTPVNKKKVPDYYKIIKRPMDLQTIRKKISKHKYQSREEFLEDIELIVDNSVLYNGPD-SV 81 (112)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCChhhcccHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC-CH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999966 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc
Q psy9598 200 IYIMTTRLSEFAEEHLRRLTVRWNS 224 (1915)
Q Consensus 200 i~~~a~~l~~~f~~~~~~~~~~~~~ 224 (1915)
++.+|..|.+.|+.+++.+...+..
T Consensus 82 i~~~A~~l~~~~~~~~~~~~~~~~~ 106 (112)
T cd05511 82 YTKKAKEMLELAEELLAEREEKLTQ 106 (112)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999877653
No 173
>cd05502 Bromo_tif1_like Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or corepressors to modulate transcription. Vertebrate Tif1-gamma, also labeled E3 ubiquitin-protein ligase TRIM33, plays a role in the control of hematopoiesis. Its homologue in Xenopus laevis, Ectodermin, has been shown to function in germ-layer specification and control of cell growth during embryogenesis. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.85 E-value=1.9e-21 Score=196.19 Aligned_cols=102 Identities=34% Similarity=0.585 Sum_probs=97.5
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcC---CCCCCHHHHHHHHHHHHHHhhhh
Q psy9598 1531 FNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRG---DNYESPIDFVKDVKRVFHNSRNY 1607 (1915)
Q Consensus 1531 ~~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~---~~Y~s~~ef~~Dv~lif~Na~~y 1607 (1915)
...++.|.+||.+|++++.++||+.||++ ++|+||++|++||||+||++||+. |.|.++++|..||+|||.||+.|
T Consensus 3 ~~~~~~c~~il~~l~~~~~s~~F~~pv~~-~~p~Y~~iI~~PmdL~tI~~kL~~~~~~~Y~s~~~f~~D~~li~~Na~~y 81 (109)
T cd05502 3 PIDQRKCERLLLELYCHELSLPFHEPVSP-SVPNYYKIIKTPMDLSLIRKKLQPKSPQHYSSPEEFVADVRLMFKNCYKF 81 (109)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhcCCCCC-CCCCHHHHCCCCccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999 899999999999999999999998 69999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1608 NQNKRSKIYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1608 N~~~~s~i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
|+++ |.++.+|..|++.|++++++++
T Consensus 82 N~~~-s~i~~~a~~l~~~f~~~~~~~~ 107 (109)
T cd05502 82 NEED-SEVAQAGKELELFFEEQLKEIL 107 (109)
T ss_pred CCCC-CHHHHHHHHHHHHHHHHHHHHC
Confidence 9988 9999999999999999999875
No 174
>cd05508 Bromo_RACK7 Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular proliferation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.85 E-value=1.4e-21 Score=191.40 Aligned_cols=96 Identities=32% Similarity=0.530 Sum_probs=90.7
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCC
Q psy9598 1532 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611 (1915)
Q Consensus 1532 ~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~ 1611 (1915)
.+...++.+++.|+ ++.|+||+.||++.++||||++|++||||+||++||++|.|.++++|.+||+|||.||+.||+++
T Consensus 3 ~l~~~L~~~~~~~~-~~~s~~F~~PV~~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~Dv~LI~~Na~~YN~~~ 81 (99)
T cd05508 3 QLSKLLKFALERMK-QPGAEPFLKPVDLEQFPDYAQYVFKPMDLSTLEKNVRKKAYGSTDAFLADAKWILHNAIIYNGGD 81 (99)
T ss_pred HHHHHHHHHHHHHh-CcCcchhcCCCChhhCCCHHHHcCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 45667888899999 99999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy9598 1612 RSKIYIMTTRLSEFAEEH 1629 (1915)
Q Consensus 1612 ~s~i~~~a~~l~~~f~~~ 1629 (1915)
|.++.+|..|.+.|+..
T Consensus 82 -s~i~~~A~~l~~~~~~e 98 (99)
T cd05508 82 -HKLTQAAKAIVKICEQE 98 (99)
T ss_pred -CHHHHHHHHHHHHHHhh
Confidence 99999999999998753
No 175
>KOG2055|consensus
Probab=99.85 E-value=9.4e-20 Score=210.81 Aligned_cols=290 Identities=13% Similarity=0.198 Sum_probs=229.0
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC--CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEeccc
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t--g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~ 595 (1915)
.+.|++|.|+|...+|++|+.|++++||.+.. ...++.+.-...+|.+.+|.|.+ ...+++++.-..+..||+.+
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G---~~~i~~s~rrky~ysyDle~ 289 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNG---HSVIFTSGRRKYLYSYDLET 289 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCC---ceEEEecccceEEEEeeccc
Confidence 46799999999999999999999999998863 44566666667899999999943 34899999999999999987
Q ss_pred CccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg 675 (1915)
.+.... ..+... ....+....+++++++|+..|..|.|.|.... +...+..+ ...+.|..++|+.+|
T Consensus 290 ak~~k~---~~~~g~------e~~~~e~FeVShd~~fia~~G~~G~I~lLhak---T~eli~s~-KieG~v~~~~fsSds 356 (514)
T KOG2055|consen 290 AKVTKL---KPPYGV------EEKSMERFEVSHDSNFIAIAGNNGHIHLLHAK---TKELITSF-KIEGVVSDFTFSSDS 356 (514)
T ss_pred cccccc---cCCCCc------ccchhheeEecCCCCeEEEcccCceEEeehhh---hhhhhhee-eeccEEeeEEEecCC
Confidence 753221 111111 12356778899999999999999999999873 23333333 246789999999999
Q ss_pred CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC--
Q psy9598 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-- 753 (1915)
Q Consensus 676 ~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-- 753 (1915)
..|++++.+|.|.+||++...+.+...+.. ...-+++|.+++|.||++|+. .|.|.|||..+
T Consensus 357 k~l~~~~~~GeV~v~nl~~~~~~~rf~D~G---------------~v~gts~~~S~ng~ylA~GS~-~GiVNIYd~~s~~ 420 (514)
T KOG2055|consen 357 KELLASGGTGEVYVWNLRQNSCLHRFVDDG---------------SVHGTSLCISLNGSYLATGSD-SGIVNIYDGNSCF 420 (514)
T ss_pred cEEEEEcCCceEEEEecCCcceEEEEeecC---------------ccceeeeeecCCCceEEeccC-cceEEEeccchhh
Confidence 999999999999999999987766554322 123467889999999999998 99999999653
Q ss_pred ----CceEEEeeCCCCCeEEEEEccCCCCEEEEEec--CceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCC
Q psy9598 754 ----GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH--DGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT 827 (1915)
Q Consensus 754 ----g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~--DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~ 827 (1915)
.+++..+..-...|++|.|++ +..+||.+|. +..+++-.+.+... ...|.. .....+.|+|++|||.|.
T Consensus 421 ~s~~PkPik~~dNLtt~Itsl~Fn~-d~qiLAiaS~~~knalrLVHvPS~TV--FsNfP~--~n~~vg~vtc~aFSP~sG 495 (514)
T KOG2055|consen 421 ASTNPKPIKTVDNLTTAITSLQFNH-DAQILAIASRVKKNALRLVHVPSCTV--FSNFPT--SNTKVGHVTCMAFSPNSG 495 (514)
T ss_pred ccCCCCchhhhhhhheeeeeeeeCc-chhhhhhhhhccccceEEEeccceee--eccCCC--CCCcccceEEEEecCCCc
Confidence 467777777778899999999 9999887764 67899998877555 444442 234457899999999999
Q ss_pred EEEEEeCCCeEEEEeCC
Q psy9598 828 TCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 828 ~Lasg~~dG~I~Iwdl~ 844 (1915)
+||+|...|.|.+|.+.
T Consensus 496 ~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 496 YLAVGNEAGRVHLFKLH 512 (514)
T ss_pred eEEeecCCCceeeEeec
Confidence 99999999999999874
No 176
>KOG0639|consensus
Probab=99.85 E-value=2.6e-20 Score=215.39 Aligned_cols=282 Identities=16% Similarity=0.237 Sum_probs=227.8
Q ss_pred ecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC---cEEEEEe--CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Q psy9598 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG---KLLATLR--GCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg---~~~~~l~--gH~~~I~~Lafspdg~~LaSgs~DgtIrVWD 546 (1915)
...|..-|.++++|...++++||+. |.|+|||+... ..+..|. ...+.|.++.+.+||+.|++|+.-.+|.|||
T Consensus 415 tL~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWD 493 (705)
T KOG0639|consen 415 TLAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWD 493 (705)
T ss_pred hhccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeee
Confidence 3589999999999999999999975 68999998542 2333332 2456799999999999999999999999999
Q ss_pred CCCCceE--EEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEE
Q psy9598 547 LQTLAPI--SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS 624 (1915)
Q Consensus 547 l~tg~~~--~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l 624 (1915)
+.+..+. ..+....-.+.+++.+|+. ++.++++.||.|.|||+.....+ ..+.+|...+.||
T Consensus 494 LAapTprikaeltssapaCyALa~spDa----kvcFsccsdGnI~vwDLhnq~~V------------rqfqGhtDGascI 557 (705)
T KOG0639|consen 494 LAAPTPRIKAELTSSAPACYALAISPDA----KVCFSCCSDGNIAVWDLHNQTLV------------RQFQGHTDGASCI 557 (705)
T ss_pred ccCCCcchhhhcCCcchhhhhhhcCCcc----ceeeeeccCCcEEEEEcccceee------------ecccCCCCCceeE
Confidence 9865443 3344444567888999954 89999999999999999876433 3345778899999
Q ss_pred EECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecc
Q psy9598 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 704 (1915)
Q Consensus 625 ~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~ 704 (1915)
.++++|..|-+|+-|.+|+-||++...... -....+.|.++.++|++.+|++|-.++.+-|-.....+
T Consensus 558 dis~dGtklWTGGlDntvRcWDlregrqlq----qhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-------- 625 (705)
T KOG0639|consen 558 DISKDGTKLWTGGLDNTVRCWDLREGRQLQ----QHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-------- 625 (705)
T ss_pred EecCCCceeecCCCccceeehhhhhhhhhh----hhhhhhhheecccCCCccceeeecccCcEEEEecCCcc--------
Confidence 999999999999999999999995432211 12346789999999999999999999988776544332
Q ss_pred cccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEe
Q psy9598 705 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG 784 (1915)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs 784 (1915)
......|...|.++.|.+.|+++++.+. |+.+..|...-|..+...+ ..+.|.++.++. +.++|+||+
T Consensus 626 ---------kyqlhlheScVLSlKFa~cGkwfvStGk-DnlLnawrtPyGasiFqsk-E~SsVlsCDIS~-ddkyIVTGS 693 (705)
T KOG0639|consen 626 ---------KYQLHLHESCVLSLKFAYCGKWFVSTGK-DNLLNAWRTPYGASIFQSK-ESSSVLSCDISF-DDKYIVTGS 693 (705)
T ss_pred ---------ceeecccccEEEEEEecccCceeeecCc-hhhhhhccCccccceeecc-ccCcceeeeecc-CceEEEecC
Confidence 1223458889999999999999999998 9999999998888887775 445799999998 899999999
Q ss_pred cCceEEEEEC
Q psy9598 785 HDGLIIIWDI 794 (1915)
Q Consensus 785 ~DG~I~IWdl 794 (1915)
.|....||.+
T Consensus 694 GdkkATVYeV 703 (705)
T KOG0639|consen 694 GDKKATVYEV 703 (705)
T ss_pred CCcceEEEEE
Confidence 9988888875
No 177
>KOG0267|consensus
Probab=99.85 E-value=1.2e-21 Score=236.20 Aligned_cols=236 Identities=25% Similarity=0.408 Sum_probs=208.4
Q ss_pred EecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q psy9598 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 550 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg 550 (1915)
.+..|...|.|+..-..++.+++|+.|..+-+|.+.....+..|.+|.++|-||.|+....+|++|+.+|+|+|||+..+
T Consensus 23 ~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeA 102 (825)
T KOG0267|consen 23 EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEA 102 (825)
T ss_pred hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhh
Confidence 45689999999998778999999999999999999888888899999999999999999999999999999999999999
Q ss_pred ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCC
Q psy9598 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 630 (1915)
Q Consensus 551 ~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg 630 (1915)
+.+++|.||...+.+|.|+|.+ .++++|+.|+.+++||++...+.... .+|...|.++.|+|+|
T Consensus 103 k~vrtLtgh~~~~~sv~f~P~~----~~~a~gStdtd~~iwD~Rk~Gc~~~~------------~s~~~vv~~l~lsP~G 166 (825)
T KOG0267|consen 103 KIVRTLTGHLLNITSVDFHPYG----EFFASGSTDTDLKIWDIRKKGCSHTY------------KSHTRVVDVLRLSPDG 166 (825)
T ss_pred hhhhhhhccccCcceeeeccce----EEeccccccccceehhhhccCceeee------------cCCcceeEEEeecCCC
Confidence 9999999999999999999976 78899999999999999866543322 2466789999999999
Q ss_pred cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCC
Q psy9598 631 LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPH 710 (1915)
Q Consensus 631 ~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~ 710 (1915)
.++++|+.|.+++|||+ ..+..+..+.+|.+.|.++.|+|..-++++||.|++|++||+++.+.+.
T Consensus 167 r~v~~g~ed~tvki~d~---~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~----------- 232 (825)
T KOG0267|consen 167 RWVASGGEDNTVKIWDL---TAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVIS----------- 232 (825)
T ss_pred ceeeccCCcceeeeecc---cccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEee-----------
Confidence 99999999999999998 4455677889999999999999999999999999999999998766332
Q ss_pred CccccccccccccEEEEEECCCCCEEEEEEe
Q psy9598 711 TKETSDETNKKIKVTMVAWDASDRWVITAIN 741 (1915)
Q Consensus 711 ~~~~~~~~~~~~~V~~va~spdg~~L~t~s~ 741 (1915)
........|.+++|++++..+++|..
T Consensus 233 -----s~~~~~~~v~~~~fn~~~~~~~~G~q 258 (825)
T KOG0267|consen 233 -----SGKPETDGVRSLAFNPDGKIVLSGEQ 258 (825)
T ss_pred -----ccCCccCCceeeeecCCceeeecCch
Confidence 12223678999999999999888865
No 178
>cd05524 Bromo_polybromo_I Bromodomain, polybromo repeat I. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.85 E-value=2.4e-21 Score=195.45 Aligned_cols=102 Identities=21% Similarity=0.343 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhh
Q psy9598 118 WKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191 (1915)
Q Consensus 118 ~~~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~ 191 (1915)
..+.|..|+..|+++.. +.+|..+|++..+||||++|++||||+||++||+++.|.|+++|.+||+|||.||+.
T Consensus 3 ~~~~c~~il~~l~~~~~~~g~~l~~~F~~~p~~~~~PdYy~iI~~Pmdl~tI~~kl~~~~Y~s~~~f~~D~~lm~~Na~~ 82 (113)
T cd05524 3 PIAVCQELYDTIRNYKSEDGRILCESFIRVPKRRNEPEYYEVVSNPIDLLKIQQKLKTEEYDDVDDLTADFELLINNAKA 82 (113)
T ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHhcCCCcccCCCHHHHhCCccCHHHHHHHhCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 45789999999997655 478999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9598 192 YNQNKRSKIYIMTTRLSEFAEEHLRRLTV 220 (1915)
Q Consensus 192 yN~~~~s~i~~~a~~l~~~f~~~~~~~~~ 220 (1915)
||+++ |.+|.+|..|+++|++.++++..
T Consensus 83 yN~~~-s~~~~~A~~L~~~f~~~~~~~~~ 110 (113)
T cd05524 83 YYKPD-SPEHKDACKLWELFLSARNEVLS 110 (113)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHHHHHhhc
Confidence 99977 99999999999999999988764
No 179
>cd05519 Bromo_SNF2 Bromodomain, SNF2-like subfamily, specific to fungi. SNF2 is a yeast protein involved in transcriptional activation, it is the catalytic component of the SWI/SNF ATP-dependent chromatin remodeling complex. The protein is essential for the regulation of gene expression (both positive and negative) of a large number of genes. The SWI/SNF complex changes chromatin structure by altering DNA-histone contacts within the nucleosome, which results in a re-positioning of the nucleosome and facilitates or represses the binding of gene-specific transcription factors. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.85 E-value=2e-21 Score=193.96 Aligned_cols=97 Identities=28% Similarity=0.451 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHhcCC------CCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhh
Q psy9598 118 WKNECREVLETLWVCP------DSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191 (1915)
Q Consensus 118 ~~~~~~~il~~l~~~~------~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~ 191 (1915)
+++.|..|++.|+.+. .+++|.+||+...+||||++|++||||+||++||+++.|.|+++|..||+|||.||+.
T Consensus 1 ~~~~~~~i~~~v~~~~~~~~~~~~~~F~~~p~~~~~pdYy~iIk~Pmdl~~I~~kl~~~~Y~s~~~f~~D~~li~~Na~~ 80 (103)
T cd05519 1 LKAAMLEIYDAVLNCEDETGRKLSELFLEKPSKKLYPDYYVIIKRPIALDQIKRRIEGRAYKSLEEFLEDFHLMFANART 80 (103)
T ss_pred CHHHHHHHHHHHHHhcCcCCCchhHHhcCCCCCCCCcCHHHHcCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHH
Confidence 4678999999999554 4899999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHH
Q psy9598 192 YNQNKRSKIYIMTTRLSEFAEEHL 215 (1915)
Q Consensus 192 yN~~~~s~i~~~a~~l~~~f~~~~ 215 (1915)
||+++ |.+|.+|..|++.|++++
T Consensus 81 yn~~~-s~i~~~A~~l~~~f~~~~ 103 (103)
T cd05519 81 YNQEG-SIVYEDAVEMEKAFKKKY 103 (103)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHhC
Confidence 99977 999999999999999864
No 180
>cd05509 Bromo_gcn5_like Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.85 E-value=2.2e-21 Score=193.59 Aligned_cols=100 Identities=34% Similarity=0.578 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCC
Q psy9598 1533 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 1612 (1915)
Q Consensus 1533 ~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~ 1612 (1915)
+..+|..||+.|++++.++||+.||++.++|+||++|++||||+||++||.++.|.|+.+|..||+|||.||+.||+++
T Consensus 2 ~~~~~~~il~~l~~~~~a~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~kl~~~~Y~s~~~f~~Dv~li~~Na~~yN~~~- 80 (101)
T cd05509 2 LYTQLKKVLDSLKNHKSAWPFLEPVDKEEAPDYYDVIKKPMDLSTMEEKLENGYYVTLEEFVADLKLIFDNCRLYNGPD- 80 (101)
T ss_pred hHHHHHHHHHHHHhCCCchhhcCCCChhhcCCHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC-
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q psy9598 1613 SKIYIMTTRLSEFAEEHLRRL 1633 (1915)
Q Consensus 1613 s~i~~~a~~l~~~f~~~~~~~ 1633 (1915)
|.+|.+|..|++.|+++++++
T Consensus 81 s~~~~~a~~l~~~f~~~~~~~ 101 (101)
T cd05509 81 TEYYKCANKLEKFFWKKLKEL 101 (101)
T ss_pred CHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999998763
No 181
>KOG1274|consensus
Probab=99.85 E-value=2.3e-19 Score=222.71 Aligned_cols=270 Identities=17% Similarity=0.228 Sum_probs=212.3
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Q psy9598 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG-KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 551 (1915)
Q Consensus 473 ~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg-~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~ 551 (1915)
.+|+...+.|+|.|+|.+|+|++.||.|++|+..+. ..-.++..|...|.+++... .+|++|+.+++|.+|.+.++.
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s--~~f~~~s~~~tv~~y~fps~~ 87 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS--NHFLTGSEQNTVLRYKFPSGE 87 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc--cceEEeeccceEEEeeCCCCC
Confidence 379999999999999999999999999999997765 44444444778888887654 489999999999999999988
Q ss_pred eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCc
Q psy9598 552 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL 631 (1915)
Q Consensus 552 ~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~ 631 (1915)
.-..+...+-++.+++|+- +|.+++.||.|-.|++.++.+.... ..+.+|.++|.++.|+|.+.
T Consensus 88 ~~~iL~Rftlp~r~~~v~g----~g~~iaagsdD~~vK~~~~~D~s~~------------~~lrgh~apVl~l~~~p~~~ 151 (933)
T KOG1274|consen 88 EDTILARFTLPIRDLAVSG----SGKMIAAGSDDTAVKLLNLDDSSQE------------KVLRGHDAPVLQLSYDPKGN 151 (933)
T ss_pred ccceeeeeeccceEEEEec----CCcEEEeecCceeEEEEeccccchh------------eeecccCCceeeeeEcCCCC
Confidence 7777777788999999986 5699999999999999998776432 23457889999999999999
Q ss_pred EEEEEeCCCeEEEEEecCCCCCceeEEec----cC-CCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccc
Q psy9598 632 FLATGSGDHHVRVYKMDGVDSPLGILEVE----EH-SDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT 706 (1915)
Q Consensus 632 ~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~----~h-~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~ 706 (1915)
+||+.+.||.|+||++........+..+. .- ...+..++|+|+|..|+..+.|+.|++|+..+........
T Consensus 152 fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr---- 227 (933)
T KOG1274|consen 152 FLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLR---- 227 (933)
T ss_pred EEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeec----
Confidence 99999999999999995432111111111 11 4456778999999999999999999999887665332211
Q ss_pred cCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEE
Q psy9598 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 780 (1915)
Q Consensus 707 ~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~L 780 (1915)
...+...++.+.|+|+|.||++++- +|.|.|||+.+... ......|++++|.| +.+-|
T Consensus 228 ----------~~~~ss~~~~~~wsPnG~YiAAs~~-~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p-~~n~i 285 (933)
T KOG1274|consen 228 ----------DKLSSSKFSDLQWSPNGKYIAASTL-DGQILVWNVDTHER----HEFKRAVCCEAWKP-NANAI 285 (933)
T ss_pred ----------ccccccceEEEEEcCCCcEEeeecc-CCcEEEEecccchh----ccccceeEEEecCC-CCCee
Confidence 1123344899999999999999998 99999999987222 22345799999999 55544
No 182
>cd05515 Bromo_polybromo_V Bromodomain, polybromo repeat V. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.85 E-value=2.4e-21 Score=193.45 Aligned_cols=97 Identities=29% Similarity=0.448 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhh
Q psy9598 119 KNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192 (1915)
Q Consensus 119 ~~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~y 192 (1915)
.++|..|++.|+.+.+ ++||+.||+..++||||++|++||||+||++||.++.|.++++|..||+|||.||++|
T Consensus 2 ~~~~~~~~~~i~~~~d~~~~~~a~~F~~~p~~~~~pdYy~iIk~PmdL~tI~~kl~~~~Y~s~~ef~~D~~l~~~Na~~y 81 (105)
T cd05515 2 QQKLWELYNAVKNYTDGRGRRLSLIFMRLPSKSEYPDYYDVIKKPIDMEKIRSKIEGNQYQSLDDMVSDFVLMFDNACKY 81 (105)
T ss_pred hHHHHHHHHHHHHhhCcCCCcccHHhccCCCcccCCcHHHHcCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5679999999987544 7999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q psy9598 193 NQNKRSKIYIMTTRLSEFAEEHLR 216 (1915)
Q Consensus 193 N~~~~s~i~~~a~~l~~~f~~~~~ 216 (1915)
|+++ |.+|.+|..|+++|.+..+
T Consensus 82 N~~~-s~i~~~A~~L~~~~~~~~~ 104 (105)
T cd05515 82 NEPD-SQIYKDALTLQKVLLETKR 104 (105)
T ss_pred CCCC-CHHHHHHHHHHHHHHHHHc
Confidence 9977 9999999999999987653
No 183
>cd05528 Bromo_AAA Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this alignment is an uncharacterized protein predicted from analysis of cDNA clones from human fetal liver
Probab=99.84 E-value=3.6e-21 Score=193.30 Aligned_cols=103 Identities=29% Similarity=0.422 Sum_probs=97.3
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCC
Q psy9598 1532 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611 (1915)
Q Consensus 1532 ~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~ 1611 (1915)
+++..|..+++.|++++.++||+.||+..++||||++|++||||+||++||+++.|.|+++|..||+|||.||+.||+++
T Consensus 3 ~lr~~L~~il~~l~~~~~~~~F~~pv~~~~~pdY~~vI~~PmdL~tI~~kl~~~~Y~s~~ef~~Dv~li~~Na~~yN~~~ 82 (112)
T cd05528 3 ELRLFLRDVLKRLASDKRFNAFTKPVDEEEVPDYYEIIKQPMDLQTILQKLDTHQYLTAKDFLKDIDLIVTNALEYNPDR 82 (112)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCccccCcHHHHHcCCCCHHHHHHHHcCCCcCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred ---CCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1612 ---RSKIYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1612 ---~s~i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
+|.|+.+|..|++.|.+++..+.
T Consensus 83 s~~~s~i~~~A~~L~~~~~~~~~~~~ 108 (112)
T cd05528 83 DPADKLIRSRACELRDEVHAMIEAEL 108 (112)
T ss_pred CccccHHHHHHHHHHHHHHHHHHhcC
Confidence 37999999999999999988754
No 184
>KOG4328|consensus
Probab=99.84 E-value=2.1e-19 Score=207.95 Aligned_cols=307 Identities=18% Similarity=0.238 Sum_probs=228.8
Q ss_pred EECCCCcEEEEEeCCCCCEEEEEEeCCC--CEEEEEeCCCcEEEEECCCC----ceEEEeecCCCCeEEEEeccCccCCC
Q psy9598 503 WRARDGKLLATLRGCSGEISDIAIDNRN--ILLAAGTVDKTIRIWNLQTL----APISVLVGHQGIITGVNFCPLEVNGF 576 (1915)
Q Consensus 503 Wd~~tg~~~~~l~gH~~~I~~Lafspdg--~~LaSgs~DgtIrVWDl~tg----~~~~~l~~h~~~V~sl~fsp~~~~d~ 576 (1915)
.++.+......++-|.+.|++++|+|.. +++|+|..-|.|-+||+.+. .-+..+..|.++|.+|.|+|. +.
T Consensus 171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~---n~ 247 (498)
T KOG4328|consen 171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPA---NT 247 (498)
T ss_pred cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCC---Ch
Confidence 3444455566677789999999999964 58899999999999999532 236677889999999999995 45
Q ss_pred cEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCcee
Q psy9598 577 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGI 656 (1915)
Q Consensus 577 ~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i 656 (1915)
..+++.|.||+|++-|+........+... .....+..+.|+.....+++|+.=|...+||++.... ..
T Consensus 248 s~i~ssSyDGtiR~~D~~~~i~e~v~s~~----------~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s--~~ 315 (498)
T KOG4328|consen 248 SQIYSSSYDGTIRLQDFEGNISEEVLSLD----------TDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS--EY 315 (498)
T ss_pred hheeeeccCceeeeeeecchhhHHHhhcC----------ccceeeeeccccCCCccEEEeecccceEEEEeecCCc--cc
Confidence 89999999999999999876432211111 1235577888888888888888888999999975443 23
Q ss_pred EEeccCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCE
Q psy9598 657 LEVEEHSDKVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 735 (1915)
Q Consensus 657 ~~l~~h~~~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~ 735 (1915)
..+.-|...|.+|+++|... +|+|||.|++++|||++....... .......|...|.++.|||.|..
T Consensus 316 ~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s------------p~lst~~HrrsV~sAyFSPs~gt 383 (498)
T KOG4328|consen 316 ENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS------------PFLSTLPHRRSVNSAYFSPSGGT 383 (498)
T ss_pred hhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC------------cceecccccceeeeeEEcCCCCc
Confidence 44556888999999999765 789999999999999986542210 13345668899999999999999
Q ss_pred EEEEEecCCeEEEEECC----CCceEEEeeCCCC------CeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceee
Q psy9598 736 VITAINFNFQIKIWDAF----NGDLVQVLKGHTN------EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805 (1915)
Q Consensus 736 L~t~s~~Dg~I~vwD~~----tg~~i~~l~gH~~------~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~ 805 (1915)
|++.+. |..|+|||.. ...+..++. |.. ......|.| +..+|++|-.-..|-|+|-..++. +..+
T Consensus 384 l~TT~~-D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P-~~~li~vg~~~r~IDv~~~~~~q~--v~el 458 (498)
T KOG4328|consen 384 LLTTCQ-DNEIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDP-DYNLIVVGRYPRPIDVFDGNGGQM--VCEL 458 (498)
T ss_pred eEeecc-CCceEEeecccccccCCccceee-ccCcccccccchhheeCC-CccEEEEeccCcceeEEcCCCCEE--eeec
Confidence 999998 9999999983 233333433 322 245567999 999999999999999999988875 4443
Q ss_pred eeeecCCCCcceEE-EEEcCCCC-EEEEEeCCCeEEEEeCCC
Q psy9598 806 HNIVEGQGEGALFD-GKWSPDGT-TCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 806 ~~~~~~~~~~~V~~-vafSpdg~-~Lasg~~dG~I~Iwdl~s 845 (1915)
. ......|.+ ..|+|-+. ++|-++..|.|+||--..
T Consensus 459 ~----~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k~ 496 (498)
T KOG4328|consen 459 H----DPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNKK 496 (498)
T ss_pred c----CccccccccceeecccccceeccCCccceEEEEecCC
Confidence 3 111123333 47999887 555566788999986543
No 185
>cd05517 Bromo_polybromo_II Bromodomain, polybromo repeat II. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.84 E-value=2.4e-21 Score=192.08 Aligned_cols=94 Identities=28% Similarity=0.456 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhh
Q psy9598 119 KNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192 (1915)
Q Consensus 119 ~~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~y 192 (1915)
+++|..|+..|+++.+ +++|.++|++.++||||+||++||||+||++||.++.|.++.+|..||+|||.||+.|
T Consensus 2 ~~~~~~l~~~i~~~~d~~gr~~~~~F~~lp~~~~~pdYy~vI~~PmdL~tI~~kl~~~~Y~s~~~f~~D~~lm~~Na~~y 81 (103)
T cd05517 2 KQILEQLLEAVMTATDPSGRLISELFQKLPSKVLYPDYYAVIKEPIDLKTIAQRIQSGYYKSIEDMEKDLDLMVKNAKTF 81 (103)
T ss_pred hHHHHHHHHHHHHhhCcCCCChhHHHhcCCCCCCCCCHHHHcCCCcCHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5789999999998766 5999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q psy9598 193 NQNKRSKIYIMTTRLSEFAEE 213 (1915)
Q Consensus 193 N~~~~s~i~~~a~~l~~~f~~ 213 (1915)
|+++ |.||.+|..|+++|+.
T Consensus 82 N~~~-s~i~~~A~~l~~~f~~ 101 (103)
T cd05517 82 NEPG-SQVYKDANAIKKIFTA 101 (103)
T ss_pred CCCC-CHHHHHHHHHHHHHHh
Confidence 9977 9999999999999985
No 186
>KOG4328|consensus
Probab=99.84 E-value=1.8e-19 Score=208.59 Aligned_cols=306 Identities=17% Similarity=0.205 Sum_probs=222.3
Q ss_pred eeeEEecCCCCcEEEEEEcCCC--CEEEEEECCCcEEEEECCCC----cEEEEEeCCCCCEEEEEEeCCC-CEEEEEeCC
Q psy9598 467 RQHYVNLGHLSAVFCVLFDKLG--EVIVTGADDLLIKLWRARDG----KLLATLRGCSGEISDIAIDNRN-ILLAAGTVD 539 (1915)
Q Consensus 467 ~~~~~l~gH~~~V~~vafspdg--~~LaTGs~Dg~I~IWd~~tg----~~~~~l~gH~~~I~~Lafspdg-~~LaSgs~D 539 (1915)
.......-|.+.|+|++|+|.. ++||+|..-|.|-+||+.+. .-+..+..|.++|.+|.|+|.+ ..+++.|.|
T Consensus 177 ~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyD 256 (498)
T KOG4328|consen 177 RILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYD 256 (498)
T ss_pred eecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccC
Confidence 3344566788999999999965 58899999999999999532 3456678999999999999954 578899999
Q ss_pred CcEEEEECCCCceE--EEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCC
Q psy9598 540 KTIRIWNLQTLAPI--SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 617 (1915)
Q Consensus 540 gtIrVWDl~tg~~~--~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1915)
|+|++-|+.++..- ..+......+.++.|+.. ...++.|..=|.+.+||++++... ...+.-|
T Consensus 257 GtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e----~~~vl~~~~~G~f~~iD~R~~~s~-----------~~~~~lh 321 (498)
T KOG4328|consen 257 GTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAE----SRSVLFGDNVGNFNVIDLRTDGSE-----------YENLRLH 321 (498)
T ss_pred ceeeeeeecchhhHHHhhcCccceeeeeccccCC----CccEEEeecccceEEEEeecCCcc-----------chhhhhh
Confidence 99999999876543 333324456667777763 367777777779999999987531 1122345
Q ss_pred CCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCc-eeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy9598 618 NAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPL-GILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 618 ~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~-~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~ 695 (1915)
...|.+++++|.. .+||+|+.|++++|||++...... .+.....|...|.+..|||.|-.|+|.+.|..|+|||...-
T Consensus 322 ~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~ 401 (498)
T KOG4328|consen 322 KKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCI 401 (498)
T ss_pred hcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccc
Confidence 5689999999964 579999999999999997654433 25566789999999999999988999999999999997411
Q ss_pred ceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCC-CeEE-EEEc
Q psy9598 696 QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN-EVFV-LESH 773 (1915)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~-~V~s-l~~s 773 (1915)
. .. .............+.........|.|+..+|+++.. -..|-|+|...++.+..+..... .|.+ ..||
T Consensus 402 s---a~----~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~-~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~H 473 (498)
T KOG4328|consen 402 S---AK----DEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRY-PRPIDVFDGNGGQMVCELHDPESSTIPSVNEFH 473 (498)
T ss_pred c---cc----CCccceeeccCcccccccchhheeCCCccEEEEecc-CcceeEEcCCCCEEeeeccCccccccccceeec
Confidence 0 00 000000111112222233456789999999998887 77899999999998888765443 4444 4699
Q ss_pred cCCCCEEEEEecCceEEEEECC
Q psy9598 774 PFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 774 p~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
|.+..+++-++..|.|+||--.
T Consensus 474 P~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 474 PMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred ccccceeccCCccceEEEEecC
Confidence 9433355555668899988654
No 187
>cd05506 Bromo_plant1 Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.84 E-value=3.4e-21 Score=191.64 Aligned_cols=96 Identities=32% Similarity=0.538 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCCC--CCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCC
Q psy9598 1534 KNECREVLETLWVCPDSEPFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611 (1915)
Q Consensus 1534 ~~~~~~ll~~l~~~~~s~~F~~pv~~~--~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~ 1611 (1915)
.++|..||+.|++++.+++|..||+.. ++|+||++|++||||+||++||+++.|.|+++|..||+|||.||+.||+++
T Consensus 2 ~~~c~~il~~l~~~~~~~~F~~pv~~~~~~~p~Y~~~I~~P~dl~tI~~kL~~~~Y~s~~ef~~D~~li~~Na~~yn~~~ 81 (99)
T cd05506 2 MKQCGTLLRKLMKHKWGWVFNAPVDVVALGLPDYFDIIKKPMDLGTVKKKLEKGEYSSPEEFAADVRLTFANAMRYNPPG 81 (99)
T ss_pred HHHHHHHHHHHHhCCCCccccCCCCccccCCCCHHHHHcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 578999999999999999999999854 799999999999999999999999999999999999999999999999988
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy9598 1612 RSKIYIMTTRLSEFAEEHL 1630 (1915)
Q Consensus 1612 ~s~i~~~a~~l~~~f~~~~ 1630 (1915)
|.+|.+|..|++.|+++|
T Consensus 82 -s~i~~~a~~l~~~fe~~w 99 (99)
T cd05506 82 -NDVHTMAKELLKIFETRW 99 (99)
T ss_pred -CHHHHHHHHHHHHHHHhC
Confidence 999999999999999876
No 188
>cd05513 Bromo_brd7_like Bromodomain, brd7_like subgroup. The BRD7 gene encodes a nuclear protein that has been shown to inhibit cell growth and the progression of the cell cycle by regulating cell-cycle genes at the transcriptional level. BRD7 has been identified as a gene involved in nasopharyngeal carcinoma. The protein interacts with acetylated histone H3 via its bromodomain. Bromodomains are 110 amino acid long domains that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.84 E-value=4.5e-21 Score=187.53 Aligned_cols=93 Identities=24% Similarity=0.422 Sum_probs=89.1
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCC
Q psy9598 1533 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 1612 (1915)
Q Consensus 1533 ~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~ 1612 (1915)
+++.|.+||+.|++++.+.+|+.||+..++||||++|++||||+||++||+++.|.|+++|.+||+|||.||++||+++
T Consensus 2 l~~~l~~il~~l~~~~~~~~F~~PV~~~~~pdY~~vIk~PmDL~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~yN~~~- 80 (98)
T cd05513 2 LQKALEQLIRQLQRKDPHGFFAFPVTDFIAPGYSSIIKHPMDFSTMKEKIKNNDYQSIEEFKDDFKLMCENAMKYNKPD- 80 (98)
T ss_pred HHHHHHHHHHHHHcCCccccccCcCCccccccHHHHHcCccCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCCC-
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CHHHHHHHHHHHHH
Q psy9598 1613 SKIYIMTTRLSEFA 1626 (1915)
Q Consensus 1613 s~i~~~a~~l~~~f 1626 (1915)
|.+|.+|..|.+.-
T Consensus 81 s~~~~~A~~L~~~~ 94 (98)
T cd05513 81 TIYYKAAKKLLHSG 94 (98)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999997654
No 189
>cd05499 Bromo_BDF1_2_II Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat II. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.84 E-value=4.7e-21 Score=191.25 Aligned_cols=95 Identities=35% Similarity=0.643 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHcC---CCCCCCCCCCCCC--CCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcC
Q psy9598 1535 NECREVLETLWVC---PDSEPFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~---~~s~~F~~pv~~~--~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~ 1609 (1915)
+.|.+||+.|++. ..++||+.|||+. ++||||++|++||||+||++||+++.|.|+++|..||+|||.||+.||+
T Consensus 3 ~~c~~Il~~l~~~~~~~~s~~F~~pvd~~~~~~pdY~~~I~~P~dL~~I~~kl~~~~Y~s~~ef~~D~~li~~N~~~yn~ 82 (102)
T cd05499 3 KFCEEVLKELMKPKHSAYNWPFLDPVDPVALNIPNYFSIIKKPMDLGTISKKLQNGQYQSAKEFERDVRLIFKNCYTFNP 82 (102)
T ss_pred HHHHHHHHHHHcccCCcccchhcCCCCccccCCCCHHHHhcCCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 5799999999984 5699999999977 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy9598 1610 NKRSKIYIMTTRLSEFAEEHL 1630 (1915)
Q Consensus 1610 ~~~s~i~~~a~~l~~~f~~~~ 1630 (1915)
++ |.+|.+|..|++.|+++|
T Consensus 83 ~~-s~~~~~a~~l~~~fe~~~ 102 (102)
T cd05499 83 EG-TDVYMMGHQLEEVFNDKW 102 (102)
T ss_pred CC-CHHHHHHHHHHHHHHHhC
Confidence 88 999999999999999875
No 190
>cd05498 Bromo_Brdt_II_like Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.84 E-value=5e-21 Score=191.42 Aligned_cols=96 Identities=31% Similarity=0.544 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHcC---CCCCCCCCCCCCC--CCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhc
Q psy9598 1534 KNECREVLETLWVC---PDSEPFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608 (1915)
Q Consensus 1534 ~~~~~~ll~~l~~~---~~s~~F~~pv~~~--~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN 1608 (1915)
.+.|.+||+.|+.+ +.++||+.||+.. ++|+||++|++||||+||++||++|.|.|+++|..||+|||.||+.||
T Consensus 2 ~~~c~~il~~l~~~~~~~~a~~F~~pv~~~~~~~p~Y~~~I~~Pmdl~~I~~kl~~~~Y~s~~ef~~D~~li~~Na~~yn 81 (102)
T cd05498 2 LKFCSGILKELFSKKHKAYAWPFYKPVDPEALGLHDYHDIIKHPMDLSTIKKKLDNREYADAQEFAADVRLMFSNCYKYN 81 (102)
T ss_pred hhHHHHHHHHHHhCCCccccCcccCcCCccccCCCcHHHHccCCCcHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 57899999999999 7899999999854 799999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy9598 1609 QNKRSKIYIMTTRLSEFAEEHL 1630 (1915)
Q Consensus 1609 ~~~~s~i~~~a~~l~~~f~~~~ 1630 (1915)
+++ |.++.+|..|++.|+++|
T Consensus 82 ~~~-s~i~~~a~~l~~~fe~~~ 102 (102)
T cd05498 82 PPD-HPVHAMARKLQDVFEDRW 102 (102)
T ss_pred CCC-CHHHHHHHHHHHHHHHhC
Confidence 988 999999999999999875
No 191
>cd05525 Bromo_ASH1 Bromodomain; ASH1_like sub-family. ASH1 (absent, small, or homeotic 1) is a member of the trithorax-group in Drosophila melanogaster, an epigenetic transcriptional regulator of HOX genes. Drosophila ASH1 has been shown to methylate specific lysines in histones H3 and H4. Mammalian ASH1 has been shown to methylate histone H3. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.84 E-value=6.9e-21 Score=189.32 Aligned_cols=96 Identities=27% Similarity=0.413 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhh
Q psy9598 118 WKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191 (1915)
Q Consensus 118 ~~~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~ 191 (1915)
+...|..||..|..+.+ ++||+++|++..+||||++|++||||+||++||.+|.|.|+++|..||.|||.||+.
T Consensus 3 l~~~l~~i~~~i~~~kd~~g~~~s~~F~~lp~k~~~pdYy~~I~~P~dL~tI~~kl~~~~Y~s~~ef~~D~~l~f~Na~~ 82 (106)
T cd05525 3 LAQVLKEICDAIITYKDSNGQSLAIPFINLPSKKKNPDYYERITDPVDLSTIEKQILTGYYKTPEAFDSDMLKVFRNAEK 82 (106)
T ss_pred HHHHHHHHHHHHHHhhccCCCcccHhhccCCCcccCCchhhhCCCCcCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 45678888888887655 699999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHH
Q psy9598 192 YNQNKRSKIYIMTTRLSEFAEEH 214 (1915)
Q Consensus 192 yN~~~~s~i~~~a~~l~~~f~~~ 214 (1915)
||+++ |.+|++|..|+++|+..
T Consensus 83 yn~~~-S~i~~~A~~L~~~f~~~ 104 (106)
T cd05525 83 YYGRK-SPIGRDVCRLRKAYYQA 104 (106)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHc
Confidence 99977 99999999999999863
No 192
>cd05520 Bromo_polybromo_III Bromodomain, polybromo repeat III. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.84 E-value=4.9e-21 Score=189.82 Aligned_cols=92 Identities=27% Similarity=0.474 Sum_probs=84.2
Q ss_pred HHHHHHHHhcCC------CCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q psy9598 122 CREVLETLWVCP------DSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQN 195 (1915)
Q Consensus 122 ~~~il~~l~~~~------~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~ 195 (1915)
+..|++.|+.+. .++||.+||++..+||||+||++||||+||++||+++.|.++.+|+.||+|||.||+.||++
T Consensus 5 ~~~l~~~i~~~~~~~g~~~s~pF~~~p~~~~~PdYy~iI~~PmdL~tI~~kl~~~~Y~s~~~f~~D~~lm~~Na~~yN~~ 84 (103)
T cd05520 5 LWQLYDTIRNARNNQGQLLAEPFLKLPSKRKYPDYYQEIKNPISLQQIRTKLKNGEYETLEELEADLNLMFENAKRYNVP 84 (103)
T ss_pred HHHHHHHHHhhcCCCCCCccHhhhcCCCcccCCCHHHHcCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHCCC
Confidence 445666666544 47999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy9598 196 KRSKIYIMTTRLSEFAEEH 214 (1915)
Q Consensus 196 ~~s~i~~~a~~l~~~f~~~ 214 (1915)
+ |.+|.+|..|+++|+++
T Consensus 85 ~-s~i~~~A~~L~~~f~~~ 102 (103)
T cd05520 85 N-SRIYKDAEKLQKLMQAK 102 (103)
T ss_pred C-CHHHHHHHHHHHHHHHh
Confidence 7 99999999999999874
No 193
>cd05518 Bromo_polybromo_IV Bromodomain, polybromo repeat IV. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.84 E-value=4.8e-21 Score=189.63 Aligned_cols=94 Identities=29% Similarity=0.492 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhcC------CCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhc
Q psy9598 120 NECREVLETLWVC------PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 193 (1915)
Q Consensus 120 ~~~~~il~~l~~~------~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN 193 (1915)
++|..|++.|.+. ..+.+|+.||++.++||||++|++||||+||++||.++.|.|+++|..||+|||.||+.||
T Consensus 3 ~~~~~l~~~v~~~~d~~gr~~~~~F~~~p~~~~~pdYy~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN 82 (103)
T cd05518 3 KRMLALFLYVLEYREGSGRRLCDLFMEKPSKKDYPDYYKIILEPIDLKTIEHNIRNDKYATEEELMDDFKLMFRNARHYN 82 (103)
T ss_pred HHHHHHHHHHHHhhccCCCcccHHHhcCCCcccCccHHHHcCCCcCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 4466777777664 4479999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q psy9598 194 QNKRSKIYIMTTRLSEFAEEH 214 (1915)
Q Consensus 194 ~~~~s~i~~~a~~l~~~f~~~ 214 (1915)
+++ |.||.+|..|+++|+++
T Consensus 83 ~~~-s~i~~~A~~le~~~~~~ 102 (103)
T cd05518 83 EEG-SQVYEDANILEKVLKEK 102 (103)
T ss_pred CCC-CHHHHHHHHHHHHHHhc
Confidence 977 99999999999999864
No 194
>KOG0270|consensus
Probab=99.83 E-value=1.9e-19 Score=208.07 Aligned_cols=269 Identities=17% Similarity=0.286 Sum_probs=198.3
Q ss_pred EEEecccCCceeeeEEecCCCCcEEEEEEcC-------CCCEEEEEECCCcEEEEECCCC---cEEEE------------
Q psy9598 456 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDK-------LGEVIVTGADDLLIKLWRARDG---KLLAT------------ 513 (1915)
Q Consensus 456 ~~i~~~~~~~~~~~~~l~gH~~~V~~vafsp-------dg~~LaTGs~Dg~I~IWd~~tg---~~~~~------------ 513 (1915)
+.+....-.++.+|+-+.-- ..-.|++|.- -|+|+|.|+.|..|.|||+.-. .+..+
T Consensus 154 vYVyn~~e~nlYvHHD~ilp-afPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~ 232 (463)
T KOG0270|consen 154 VYVYNEEEENLYVHHDFILP-AFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKK 232 (463)
T ss_pred EEEEcCCCcceeEecceecc-CcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhh
Confidence 33333334455555433321 2235777742 3789999999999999997521 11111
Q ss_pred ------EeCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC
Q psy9598 514 ------LRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586 (1915)
Q Consensus 514 ------l~gH~~~I~~Lafspd-g~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg 586 (1915)
-.+|+..|.+|+|+.. .+.|||||.|.+|++||+.+|++..++..|.+.|.++.|+|.. ..+|++||.|+
T Consensus 233 ~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~---p~~LLsGs~D~ 309 (463)
T KOG0270|consen 233 GKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYE---PSVLLSGSYDG 309 (463)
T ss_pred cccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCC---ceEEEeccccc
Confidence 2379999999999875 5689999999999999999999999999999999999999964 58999999999
Q ss_pred eEEEEecccCcccc-ceeccCccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCC
Q psy9598 587 CIGFWKYKLDIDIS-KTVFHEPVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD 664 (1915)
Q Consensus 587 tI~iWDl~~~~~~~-~~~~~~~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~ 664 (1915)
+|.+.|.+...... ...+ .+.|-.++|.|.. ..+++++.||+|+-+|++... ..+.++.+|.+
T Consensus 310 ~V~l~D~R~~~~s~~~wk~-------------~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~--~~vwt~~AHd~ 374 (463)
T KOG0270|consen 310 TVALKDCRDPSNSGKEWKF-------------DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG--KPVWTLKAHDD 374 (463)
T ss_pred eEEeeeccCccccCceEEe-------------ccceEEEEecCCCceeEEEecCCceEEeeecCCCC--CceeEEEeccC
Confidence 99999998532211 1112 2778899999865 467788899999999997544 67889999999
Q ss_pred CeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecC
Q psy9598 665 KVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 743 (1915)
Q Consensus 665 ~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~D 743 (1915)
.|.+|+++..- .+|++++.|+.|++|++......... .....-+...|.++.|+-.++++.++..
T Consensus 375 ~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~--------------~~~~~~~rl~c~~~~~~~a~~la~GG~k 440 (463)
T KOG0270|consen 375 EISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVK--------------EHSFKLGRLHCFALDPDVAFTLAFGGEK 440 (463)
T ss_pred CcceEEecCCCCcceeeccccceEEEEeecCCCCcccc--------------cccccccceeecccCCCcceEEEecCcc
Confidence 99999998754 47889999999999998754411100 0011112367778888877666555547
Q ss_pred CeEEEEECCCCceE
Q psy9598 744 FQIKIWDAFNGDLV 757 (1915)
Q Consensus 744 g~I~vwD~~tg~~i 757 (1915)
+.++|||+.+...+
T Consensus 441 ~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 441 AVLRVWDIFTNSPV 454 (463)
T ss_pred ceEEEeecccChhH
Confidence 78999999876544
No 195
>cd05500 Bromo_BDF1_2_I Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat I. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.83 E-value=1e-20 Score=188.89 Aligned_cols=99 Identities=31% Similarity=0.470 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCCCC--CCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhc
Q psy9598 1531 FNWKNECREVLETLWVCPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608 (1915)
Q Consensus 1531 ~~~~~~~~~ll~~l~~~~~s~~F~~pv~~--~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN 1608 (1915)
..+.+.|.++|+.|++++.++||+.||++ .++|+||++|++||||+||++||.+|.|.++.+|..||+|||.||+.||
T Consensus 3 ~~~~~~~~~ii~~l~~~~~a~~F~~pv~~~~~~~p~Y~~~I~~P~dL~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~yN 82 (103)
T cd05500 3 KHQHKFLLSSIRSLKRLKDARPFLVPVDPVKLNIPHYPTIIKKPMDLGTIERKLKSNVYTSVEEFTADFNLMVDNCLTFN 82 (103)
T ss_pred HHHHHHHHHHHHHHHcCCCChhhcCCCCcccccCCCHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 45678999999999999999999999995 4899999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy9598 1609 QNKRSKIYIMTTRLSEFAEEHL 1630 (1915)
Q Consensus 1609 ~~~~s~i~~~a~~l~~~f~~~~ 1630 (1915)
+++ |.++.+|..|++.|++.+
T Consensus 83 ~~~-s~~~~~A~~l~~~fe~~~ 103 (103)
T cd05500 83 GPE-HPVSQMGKRLQAAFEKHL 103 (103)
T ss_pred CCC-CHHHHHHHHHHHHHHHhC
Confidence 988 999999999999999753
No 196
>cd05524 Bromo_polybromo_I Bromodomain, polybromo repeat I. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.83 E-value=8.5e-21 Score=191.47 Aligned_cols=102 Identities=21% Similarity=0.343 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhh
Q psy9598 1533 WKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 1606 (1915)
Q Consensus 1533 ~~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~ 1606 (1915)
..+.|.+||+.|+++.+ +.+|..+|++..+||||++|++||||+||++||.++.|.|+++|..||+|||+||+.
T Consensus 3 ~~~~c~~il~~l~~~~~~~g~~l~~~F~~~p~~~~~PdYy~iI~~Pmdl~tI~~kl~~~~Y~s~~~f~~D~~lm~~Na~~ 82 (113)
T cd05524 3 PIAVCQELYDTIRNYKSEDGRILCESFIRVPKRRNEPEYYEVVSNPIDLLKIQQKLKTEEYDDVDDLTADFELLINNAKA 82 (113)
T ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHhcCCCcccCCCHHHHhCCccCHHHHHHHhCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 35789999999997655 468999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1607 YNQNKRSKIYIMTTRLSEFAEEHLRRLTV 1635 (1915)
Q Consensus 1607 yN~~~~s~i~~~a~~l~~~f~~~~~~~~~ 1635 (1915)
||+++ |.+|.+|..|+++|++.++++..
T Consensus 83 yN~~~-s~~~~~A~~L~~~f~~~~~~~~~ 110 (113)
T cd05524 83 YYKPD-SPEHKDACKLWELFLSARNEVLS 110 (113)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHHHHHhhc
Confidence 99988 99999999999999999988764
No 197
>cd05515 Bromo_polybromo_V Bromodomain, polybromo repeat V. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.83 E-value=7.7e-21 Score=189.81 Aligned_cols=97 Identities=29% Similarity=0.448 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhh
Q psy9598 1534 KNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 1607 (1915)
Q Consensus 1534 ~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~y 1607 (1915)
.++|.+|++.|+.+.+ ++||+.||++.++||||++|++||||+||++||.++.|.|+++|..||+|||.||+.|
T Consensus 2 ~~~~~~~~~~i~~~~d~~~~~~a~~F~~~p~~~~~pdYy~iIk~PmdL~tI~~kl~~~~Y~s~~ef~~D~~l~~~Na~~y 81 (105)
T cd05515 2 QQKLWELYNAVKNYTDGRGRRLSLIFMRLPSKSEYPDYYDVIKKPIDMEKIRSKIEGNQYQSLDDMVSDFVLMFDNACKY 81 (105)
T ss_pred hHHHHHHHHHHHHhhCcCCCcccHHhccCCCcccCCcHHHHcCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4689999999997655 7899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q psy9598 1608 NQNKRSKIYIMTTRLSEFAEEHLR 1631 (1915)
Q Consensus 1608 N~~~~s~i~~~a~~l~~~f~~~~~ 1631 (1915)
|+++ |.+|.+|..|+++|.++.+
T Consensus 82 N~~~-s~i~~~A~~L~~~~~~~~~ 104 (105)
T cd05515 82 NEPD-SQIYKDALTLQKVLLETKR 104 (105)
T ss_pred CCCC-CHHHHHHHHHHHHHHHHHc
Confidence 9988 9999999999999987653
No 198
>cd05512 Bromo_brd1_like Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. Bromodomains are 110 amino acid long domains that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.83 E-value=8.4e-21 Score=186.37 Aligned_cols=93 Identities=29% Similarity=0.463 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCC
Q psy9598 1533 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 1612 (1915)
Q Consensus 1533 ~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~ 1612 (1915)
|...|+.+|..|+.++.+++|+.||+..++||||++|++||||+||++||.++.|.|+++|..||+|||.||+.||.++
T Consensus 2 ~~~~l~~il~~l~~~~~~~~F~~pVd~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN~~~- 80 (98)
T cd05512 2 LEVLLRKTLDQLQEKDTAEIFSEPVDLSEVPDYLDHIKQPMDFSTMRKKLESQRYRTLEDFEADFNLIINNCLAYNAKD- 80 (98)
T ss_pred HHHHHHHHHHHHHhCCCchhhcCCCCccccCCHHHHhcCCcCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCCC-
Confidence 5577999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CHHHHHHHHHHHHH
Q psy9598 1613 SKIYIMTTRLSEFA 1626 (1915)
Q Consensus 1613 s~i~~~a~~l~~~f 1626 (1915)
|.+|++|..|++.-
T Consensus 81 s~~~~~A~~l~~~~ 94 (98)
T cd05512 81 TIFYRAAVRLRDQG 94 (98)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999998754
No 199
>cd05525 Bromo_ASH1 Bromodomain; ASH1_like sub-family. ASH1 (absent, small, or homeotic 1) is a member of the trithorax-group in Drosophila melanogaster, an epigenetic transcriptional regulator of HOX genes. Drosophila ASH1 has been shown to methylate specific lysines in histones H3 and H4. Mammalian ASH1 has been shown to methylate histone H3. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.83 E-value=1.1e-20 Score=187.75 Aligned_cols=96 Identities=27% Similarity=0.413 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhh
Q psy9598 1533 WKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 1606 (1915)
Q Consensus 1533 ~~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~ 1606 (1915)
+...|..|++.|..+++ |+||+.+|++.++||||++|++||||+||++||.+|.|.|+++|..||.|||.||+.
T Consensus 3 l~~~l~~i~~~i~~~kd~~g~~~s~~F~~lp~k~~~pdYy~~I~~P~dL~tI~~kl~~~~Y~s~~ef~~D~~l~f~Na~~ 82 (106)
T cd05525 3 LAQVLKEICDAIITYKDSNGQSLAIPFINLPSKKKNPDYYERITDPVDLSTIEKQILTGYYKTPEAFDSDMLKVFRNAEK 82 (106)
T ss_pred HHHHHHHHHHHHHHhhccCCCcccHhhccCCCcccCCchhhhCCCCcCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 55778999999987655 699999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHH
Q psy9598 1607 YNQNKRSKIYIMTTRLSEFAEEH 1629 (1915)
Q Consensus 1607 yN~~~~s~i~~~a~~l~~~f~~~ 1629 (1915)
||+++ |.||.+|..|+++|++.
T Consensus 83 yn~~~-S~i~~~A~~L~~~f~~~ 104 (106)
T cd05525 83 YYGRK-SPIGRDVCRLRKAYYQA 104 (106)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHc
Confidence 99988 99999999999999864
No 200
>cd05517 Bromo_polybromo_II Bromodomain, polybromo repeat II. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.83 E-value=7.3e-21 Score=188.61 Aligned_cols=94 Identities=28% Similarity=0.456 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhh
Q psy9598 1534 KNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 1607 (1915)
Q Consensus 1534 ~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~y 1607 (1915)
++.|.+|++.|+++.+ +++|..+|++.++||||++|++||||+||++||.++.|.++.+|..||+|||.||++|
T Consensus 2 ~~~~~~l~~~i~~~~d~~gr~~~~~F~~lp~~~~~pdYy~vI~~PmdL~tI~~kl~~~~Y~s~~~f~~D~~lm~~Na~~y 81 (103)
T cd05517 2 KQILEQLLEAVMTATDPSGRLISELFQKLPSKVLYPDYYAVIKEPIDLKTIAQRIQSGYYKSIEDMEKDLDLMVKNAKTF 81 (103)
T ss_pred hHHHHHHHHHHHHhhCcCCCChhHHHhcCCCCCCCCCHHHHcCCCcCHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5789999999998766 6999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q psy9598 1608 NQNKRSKIYIMTTRLSEFAEE 1628 (1915)
Q Consensus 1608 N~~~~s~i~~~a~~l~~~f~~ 1628 (1915)
|+++ |.||.+|..|+++|+.
T Consensus 82 N~~~-s~i~~~A~~l~~~f~~ 101 (103)
T cd05517 82 NEPG-SQVYKDANAIKKIFTA 101 (103)
T ss_pred CCCC-CHHHHHHHHHHHHHHh
Confidence 9988 9999999999999975
No 201
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.83 E-value=6.1e-17 Score=202.74 Aligned_cols=354 Identities=26% Similarity=0.434 Sum_probs=268.6
Q ss_pred cccCCCeEEEecccCCceeeeEEecCCC-CcEEEEEE-cCCCC-EEEEEEC-CCcEEEEECCC-CcEEEEEeCCCCCEEE
Q psy9598 449 SGPLSRSLMISSHKYSNLRQHYVNLGHL-SAVFCVLF-DKLGE-VIVTGAD-DLLIKLWRARD-GKLLATLRGCSGEISD 523 (1915)
Q Consensus 449 tg~~d~~~~i~~~~~~~~~~~~~l~gH~-~~V~~vaf-spdg~-~LaTGs~-Dg~I~IWd~~t-g~~~~~l~gH~~~I~~ 523 (1915)
.++.++.+.+|...... .....+.++. ..+..+.+ ++++. +++..+. |+.+.+|++.. +.....+.+|...|.+
T Consensus 82 ~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 160 (466)
T COG2319 82 SGSSDGTIKLWDLDNGE-KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTS 160 (466)
T ss_pred EecCCCcEEEEEcCCCc-eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEE
Confidence 34478888888766554 2344555543 47777777 88887 5555445 99999999988 8888999999999999
Q ss_pred EEEeCCCCEEEEEeC-CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccce
Q psy9598 524 IAIDNRNILLAAGTV-DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT 602 (1915)
Q Consensus 524 Lafspdg~~LaSgs~-DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~ 602 (1915)
++|++++.++++++. |+.+++|++.++..+..+.+|...|.+++|+|.+ ..++++++.|+.|.+||...+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~d~~i~~wd~~~~~~~~~- 236 (466)
T COG2319 161 LAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDG---GLLIASGSSDGTIRLWDLSTGKLLRS- 236 (466)
T ss_pred EEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCc---ceEEEEecCCCcEEEEECCCCcEEee-
Confidence 999999999999986 9999999999999999999999999999999743 12555569999999998774433221
Q ss_pred eccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEe
Q psy9598 603 VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 682 (1915)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs 682 (1915)
.+..|...+ ...|++++.++++++.|+.+++|++..... .+..+.+|...|.++.|+|++..+++++
T Consensus 237 ----------~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 303 (466)
T COG2319 237 ----------TLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS--LLRTLSGHSSSVLSVAFSPDGKLLASGS 303 (466)
T ss_pred ----------ecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc--EEEEEecCCccEEEEEECCCCCEEEEee
Confidence 122333443 338999998899999999999999954433 2333368899999999999888898899
Q ss_pred CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC
Q psy9598 683 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g 762 (1915)
.|+.+.+|++.+........ ...+...+..+.|.+++..++.++..|+.+.+|++...........
T Consensus 304 ~d~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 369 (466)
T COG2319 304 SDGTVRLWDLETGKLLSSLT--------------LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEG 369 (466)
T ss_pred CCCcEEEEEcCCCceEEEee--------------ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecC
Confidence 99999999888776433221 1224446888888433356666644489999999988773333333
Q ss_pred CCCCeEEEEEccCCCCEEEE-EecCceEEEEECCCCccccceeeeeeecCCCC-cceEEEEEcCCCCEEEEEeCCCeEEE
Q psy9598 763 HTNEVFVLESHPFDSRVLLS-AGHDGLIIIWDILSSKQRGYKWFHNIVEGQGE-GALFDGKWSPDGTTCALTDSYGHLLV 840 (1915)
Q Consensus 763 H~~~V~sl~~sp~dg~~LaS-gs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~-~~V~~vafSpdg~~Lasg~~dG~I~I 840 (1915)
+.. +..+.+.+ + ..+++ ++.++.+.+|+...... ...+. .. ..+..+.+++++..++.++.++.+.+
T Consensus 370 ~~~-~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (466)
T COG2319 370 HSN-VLSVSFSP-D-GRVVSSGSTDGTVRLWDLSTGSL--LRNLD------GHTSRVTSLDFSPDGKSLASGSSDNTIRL 438 (466)
T ss_pred Cce-EEEEEECC-C-CCEEEEecCCCceEEEecccCee--eeecc------CCCCcEEEEEECCCCcEEEEecCCCcEEE
Confidence 332 88999998 7 55555 88999999999988766 33322 12 67889999999999999999999999
Q ss_pred EeCCC
Q psy9598 841 YGLGG 845 (1915)
Q Consensus 841 wdl~s 845 (1915)
|++.+
T Consensus 439 ~~~~~ 443 (466)
T COG2319 439 WDLKT 443 (466)
T ss_pred EeccC
Confidence 99988
No 202
>KOG4227|consensus
Probab=99.83 E-value=1.9e-19 Score=202.42 Aligned_cols=301 Identities=17% Similarity=0.229 Sum_probs=226.0
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC------CcEEEEEe-CCCCCEEEEEEeCCCCEEEEEeCCCcE
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD------GKLLATLR-GCSGEISDIAIDNRNILLAAGTVDKTI 542 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t------g~~~~~l~-gH~~~I~~Lafspdg~~LaSgs~DgtI 542 (1915)
+-+.+|.+.|++|.|+.+|++||+|+.|..++||++.. .+++.... .|.+.|.||+|...+++|++|+.+++|
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence 45789999999999999999999999999999999753 34555443 355899999999999999999999999
Q ss_pred EEEECCCCceEEEeec--CCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCc
Q psy9598 543 RIWNLQTLAPISVLVG--HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 620 (1915)
Q Consensus 543 rVWDl~tg~~~~~l~~--h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1915)
.+.|+.+.+.+.++.. ..+.|..+..+|.. ++|++.+.+|.|.|||++.........+. ......
T Consensus 130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~D----N~~~~~t~~~~V~~~D~Rd~~~~~~~~~~---------AN~~~~ 196 (609)
T KOG4227|consen 130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTD----NTLIVVTRAKLVSFIDNRDRQNPISLVLP---------ANSGKN 196 (609)
T ss_pred EeeecccceeeeeecccCcccceeecccCCCC----ceEEEEecCceEEEEeccCCCCCCceeee---------cCCCcc
Confidence 9999999888877752 33599999999964 89999999999999999876532222211 112355
Q ss_pred eEEEEECCC-CcEEEEEeCCCeEEEEEecCCCCCcee----EEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy9598 621 ILCSSFSPG-GLFLATGSGDHHVRVYKMDGVDSPLGI----LEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 621 V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i----~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~ 695 (1915)
.+++.|+|. ..+|++.+..+-+.|||++....+... ..+......-.++.|+|+|+.|++--....-.+||+-+.
T Consensus 197 F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~ 276 (609)
T KOG4227|consen 197 FYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQ 276 (609)
T ss_pred ceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecc
Confidence 778899995 467888888999999999654332211 112222223357789999999998877777788898887
Q ss_pred ceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC----------C-----------
Q psy9598 696 QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN----------G----------- 754 (1915)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t----------g----------- 754 (1915)
.+.....+.... .......+.+++|-.+- .|++|+. +-.|++|.+.. |
T Consensus 277 R~~V~k~D~N~~---------GY~N~~T~KS~~F~~D~-~v~tGSD-~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~ 345 (609)
T KOG4227|consen 277 RCFVLKSDHNPN---------GYCNIKTIKSMTFIDDY-TVATGSD-HWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIF 345 (609)
T ss_pred cceeEeccCCCC---------cceeeeeeeeeeeecce-eeeccCc-ccceEEEecCCCccccCccccCcchhhCchhhe
Confidence 765544332211 11123456677776544 4777776 88999998742 1
Q ss_pred --ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 755 --DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 755 --~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
..+.+|+||.+.++.|.|+| ...+|++.|-...++||.-.
T Consensus 346 i~~~~~VLrGHRSv~NQVRF~~-H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 346 IEKELTVLRGHRSVPNQVRFSQ-HNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred ecceeEEEecccccccceeecC-CcceEeccchhhheeccccc
Confidence 23567899999999999999 78899999999999999753
No 203
>cd05529 Bromo_WDR9_I_like Bromodomain; WDR9 repeat I_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional regulator involved in chromatin remodeling and play a role in embryonic development. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.83 E-value=1.9e-20 Score=193.29 Aligned_cols=102 Identities=30% Similarity=0.340 Sum_probs=96.4
Q ss_pred chhHHHHHHHHHHHHh---cCCCCCCCCCCCCCC-CCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Q psy9598 115 PFNWKNECREVLETLW---VCPDSEPFRKPVDKL-DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSR 190 (1915)
Q Consensus 115 ~~~~~~~~~~il~~l~---~~~~~~~F~~pvd~~-~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~ 190 (1915)
...++..|..+|.+|+ +++.++||..||+.. .+|+||++|++||||+||++||.++.|.++++|..||+|||.||+
T Consensus 22 ~~~~~~~i~~~l~~l~~~~~~~~~~~F~~pv~~~~~~p~Y~~iI~~PmdL~tI~~kl~~~~Y~s~~~f~~Dv~Li~~Na~ 101 (128)
T cd05529 22 RDEERERLISGLDKLLLSLQLEIAEYFEYPVDLRAWYPDYWNRVPVPMDLETIRSRLENRYYRSLEALRHDVRLILSNAE 101 (128)
T ss_pred CHHHHHHHHHHHHHHHhcccCcccccccCCCCccccCCcHHHHcCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 3567888999999999 899999999999988 999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9598 191 NYNQNKRSKIYIMTTRLSEFAEEHLRR 217 (1915)
Q Consensus 191 ~yN~~~~s~i~~~a~~l~~~f~~~~~~ 217 (1915)
+||+++ |.++.+|..|+++|.++++.
T Consensus 102 ~yN~~~-s~i~~~A~~l~~~~~~~l~~ 127 (128)
T cd05529 102 TFNEPN-SEIAKKAKRLSDWLLRILSS 127 (128)
T ss_pred HHCCCC-CHHHHHHHHHHHHHHHHhcc
Confidence 999976 99999999999999988753
No 204
>cd05519 Bromo_SNF2 Bromodomain, SNF2-like subfamily, specific to fungi. SNF2 is a yeast protein involved in transcriptional activation, it is the catalytic component of the SWI/SNF ATP-dependent chromatin remodeling complex. The protein is essential for the regulation of gene expression (both positive and negative) of a large number of genes. The SWI/SNF complex changes chromatin structure by altering DNA-histone contacts within the nucleosome, which results in a re-positioning of the nucleosome and facilitates or represses the binding of gene-specific transcription factors. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.83 E-value=1.2e-20 Score=188.32 Aligned_cols=97 Identities=29% Similarity=0.481 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhh
Q psy9598 1533 WKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 1606 (1915)
Q Consensus 1533 ~~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~ 1606 (1915)
+++.|++|++.|+++++ +++|..||++.++|+||++|++||||+||++||++|.|.|+.+|..||+|||.||+.
T Consensus 1 ~~~~~~~i~~~v~~~~~~~~~~~~~~F~~~p~~~~~pdYy~iIk~Pmdl~~I~~kl~~~~Y~s~~~f~~D~~li~~Na~~ 80 (103)
T cd05519 1 LKAAMLEIYDAVLNCEDETGRKLSELFLEKPSKKLYPDYYVIIKRPIALDQIKRRIEGRAYKSLEEFLEDFHLMFANART 80 (103)
T ss_pred CHHHHHHHHHHHHHhcCcCCCchhHHhcCCCCCCCCcCHHHHcCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHH
Confidence 46789999999996554 899999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHH
Q psy9598 1607 YNQNKRSKIYIMTTRLSEFAEEHL 1630 (1915)
Q Consensus 1607 yN~~~~s~i~~~a~~l~~~f~~~~ 1630 (1915)
||+++ |.+|.+|..|++.|++++
T Consensus 81 yn~~~-s~i~~~A~~l~~~f~~~~ 103 (103)
T cd05519 81 YNQEG-SIVYEDAVEMEKAFKKKY 103 (103)
T ss_pred HCCCC-CHHHHHHHHHHHHHHHhC
Confidence 99988 999999999999998763
No 205
>KOG0269|consensus
Probab=99.83 E-value=4.6e-20 Score=224.64 Aligned_cols=242 Identities=19% Similarity=0.335 Sum_probs=190.4
Q ss_pred cEEEEEEcC-CCCEEEEEECCCcEEEEECCC---CcEEEEEeCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCCCce
Q psy9598 478 AVFCVLFDK-LGEVIVTGADDLLIKLWRARD---GKLLATLRGCSGEISDIAIDNR-NILLAAGTVDKTIRIWNLQTLAP 552 (1915)
Q Consensus 478 ~V~~vafsp-dg~~LaTGs~Dg~I~IWd~~t---g~~~~~l~gH~~~I~~Lafspd-g~~LaSgs~DgtIrVWDl~tg~~ 552 (1915)
++..|.|+. +.++|||++..|.|.+||+.. .+++..|..|...|+++.|++. ..+|+|||.||+|++||++....
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S 168 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS 168 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc
Confidence 455667763 568999999999999999987 5677789999999999999884 56899999999999999999999
Q ss_pred EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 553 ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 553 ~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
..++.+....|..|.|+|. .+.+|+++...|.+++||++... .....+.+|.+.|.|+.|+|++.+
T Consensus 169 ~~t~~~nSESiRDV~fsp~---~~~~F~s~~dsG~lqlWDlRqp~-----------r~~~k~~AH~GpV~c~nwhPnr~~ 234 (839)
T KOG0269|consen 169 KSTFRSNSESIRDVKFSPG---YGNKFASIHDSGYLQLWDLRQPD-----------RCEKKLTAHNGPVLCLNWHPNREW 234 (839)
T ss_pred cccccccchhhhceeeccC---CCceEEEecCCceEEEeeccCch-----------hHHHHhhcccCceEEEeecCCCce
Confidence 9999999999999999994 57999999999999999998653 233345688999999999999999
Q ss_pred EEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCC-EEEEEe--CCCcEEEEEccCCceEEeeecccccCC
Q psy9598 633 LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-RFVSGS--RDGTALIWYYKCSQWRFIRLDMNTCLP 709 (1915)
Q Consensus 633 Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~-~L~sgs--~DG~I~IWDl~~~~~~~~~~~~~~~~~ 709 (1915)
||+||.|+.|+||++.+. ....+.++ .-..+|..|.|-|... +|++++ .|-.|+|||++..-.
T Consensus 235 lATGGRDK~vkiWd~t~~-~~~~~~tI-nTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYI------------ 300 (839)
T KOG0269|consen 235 LATGGRDKMVKIWDMTDS-RAKPKHTI-NTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYI------------ 300 (839)
T ss_pred eeecCCCccEEEEeccCC-CccceeEE-eecceeeeeeeccCccchhhhhhccccceEEEEeeccccc------------
Confidence 999999999999999533 23333333 2346899999999866 566655 577899999985431
Q ss_pred CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEE
Q psy9598 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 750 (1915)
Q Consensus 710 ~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD 750 (1915)
+......|...++.++|...+..++-.++.||+|..-.
T Consensus 301 ---P~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~ 338 (839)
T KOG0269|consen 301 ---PYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHL 338 (839)
T ss_pred ---cceeeeccCccccceeccCCCceeeEeecCccHHHHhh
Confidence 12234457788899999774444444444466655433
No 206
>cd05511 Bromo_TFIID Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to acetylated histone H4. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.83 E-value=2e-20 Score=188.69 Aligned_cols=103 Identities=35% Similarity=0.491 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCH
Q psy9598 1535 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSK 1614 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~ 1614 (1915)
..+.+|+..|++++.++||+.||++..+|+||++|++||||+||++||.++.|.++++|..||+|||.||+.||+++ |.
T Consensus 3 ~~l~~ii~~l~~~~~s~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~kl~~~~Y~s~~ef~~Dv~li~~Na~~yN~~~-s~ 81 (112)
T cd05511 3 FILDEIVNELKNLPDSWPFHTPVNKKKVPDYYKIIKRPMDLQTIRKKISKHKYQSREEFLEDIELIVDNSVLYNGPD-SV 81 (112)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCChhhcccHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC-CH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q psy9598 1615 IYIMTTRLSEFAEEHLRRLTVRWN 1638 (1915)
Q Consensus 1615 i~~~a~~l~~~f~~~~~~~~~~~~ 1638 (1915)
+|.+|..|.+.|+.++.++...+.
T Consensus 82 i~~~A~~l~~~~~~~~~~~~~~~~ 105 (112)
T cd05511 82 YTKKAKEMLELAEELLAEREEKLT 105 (112)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999987654
No 207
>cd05520 Bromo_polybromo_III Bromodomain, polybromo repeat III. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.82 E-value=1.3e-20 Score=186.90 Aligned_cols=93 Identities=27% Similarity=0.489 Sum_probs=86.4
Q ss_pred HHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcC
Q psy9598 1536 ECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609 (1915)
Q Consensus 1536 ~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~ 1609 (1915)
.+..|++.|+++++ ++||..||++.++||||++|++||||+||++||++|.|.++.+|+.||+|||.||+.||+
T Consensus 4 ~~~~l~~~i~~~~~~~g~~~s~pF~~~p~~~~~PdYy~iI~~PmdL~tI~~kl~~~~Y~s~~~f~~D~~lm~~Na~~yN~ 83 (103)
T cd05520 4 PLWQLYDTIRNARNNQGQLLAEPFLKLPSKRKYPDYYQEIKNPISLQQIRTKLKNGEYETLEELEADLNLMFENAKRYNV 83 (103)
T ss_pred hHHHHHHHHHhhcCCCCCCccHhhhcCCCcccCCCHHHHcCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 35677777776553 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q psy9598 1610 NKRSKIYIMTTRLSEFAEEH 1629 (1915)
Q Consensus 1610 ~~~s~i~~~a~~l~~~f~~~ 1629 (1915)
++ |.+|.+|..|+++|+++
T Consensus 84 ~~-s~i~~~A~~L~~~f~~~ 102 (103)
T cd05520 84 PN-SRIYKDAEKLQKLMQAK 102 (103)
T ss_pred CC-CHHHHHHHHHHHHHHHh
Confidence 88 99999999999999875
No 208
>KOG1273|consensus
Probab=99.82 E-value=4.3e-19 Score=196.15 Aligned_cols=297 Identities=13% Similarity=0.177 Sum_probs=218.5
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcccc
Q psy9598 521 ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDIS 600 (1915)
Q Consensus 521 I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~ 600 (1915)
-.|+.|++.|.+||+|+.||.|.|||+.|...-..+.+|..+|++++|++ +|+.|+++|.|..|.+||+..+..+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~----dgr~LltsS~D~si~lwDl~~gs~l~ 101 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSR----DGRKLLTSSRDWSIKLWDLLKGSPLK 101 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecC----CCCEeeeecCCceeEEEeccCCCcee
Confidence 78999999999999999999999999999998889999999999999999 55999999999999999999998888
Q ss_pred ceeccCccccccccCCCCCceEEEEECCCCc-EEEEEeCCCeEEEEEecCCCCCceeEEec--c-CCCCeeEEEEcCCCC
Q psy9598 601 KTVFHEPVMFNERIRPGNAHILCSSFSPGGL-FLATGSGDHHVRVYKMDGVDSPLGILEVE--E-HSDKVDSIQWSHSHL 676 (1915)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~-~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~--~-h~~~V~sl~fspdg~ 676 (1915)
.+.|. ++|+.+.|+|... ..++.-.+..-.+.++.... ..+.... + .+..-.+..|.+.|+
T Consensus 102 rirf~-------------spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~--h~~Lp~d~d~dln~sas~~~fdr~g~ 166 (405)
T KOG1273|consen 102 RIRFD-------------SPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK--HSVLPKDDDGDLNSSASHGVFDRRGK 166 (405)
T ss_pred EEEcc-------------CccceeeeccccCCeEEEEEecCCcEEEEecCCc--eeeccCCCccccccccccccccCCCC
Confidence 88777 6788888888533 33333333334455552211 1111000 0 111122335889999
Q ss_pred EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC--
Q psy9598 677 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG-- 754 (1915)
Q Consensus 677 ~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg-- 754 (1915)
++++|...|.+.++|..+.+++....- .....|..+-|+..|++|++-++ |..|++|++..-
T Consensus 167 yIitGtsKGkllv~~a~t~e~vas~ri---------------ts~~~IK~I~~s~~g~~liiNts-DRvIR~ye~~di~~ 230 (405)
T KOG1273|consen 167 YIITGTSKGKLLVYDAETLECVASFRI---------------TSVQAIKQIIVSRKGRFLIINTS-DRVIRTYEISDIDD 230 (405)
T ss_pred EEEEecCcceEEEEecchheeeeeeee---------------chheeeeEEEEeccCcEEEEecC-CceEEEEehhhhcc
Confidence 999999999999999998876543211 01356788999999999999999 999999997621
Q ss_pred -----c--eEEEeeC--CCCCeEEEEEccCCCCEEEEEec-CceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 755 -----D--LVQVLKG--HTNEVFVLESHPFDSRVLLSAGH-DGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 755 -----~--~i~~l~g--H~~~V~sl~~sp~dg~~LaSgs~-DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
+ +.+.++. ....=.+++|+. +|.+++.|+. -..++||.-..|.. ++.++ |.......++.|+|
T Consensus 231 ~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~-dgeYv~a~s~~aHaLYIWE~~~GsL--VKILh----G~kgE~l~DV~whp 303 (405)
T KOG1273|consen 231 EGRDGEVEPEHKLQDVVNKLQWKKCCFSG-DGEYVCAGSARAHALYIWEKSIGSL--VKILH----GTKGEELLDVNWHP 303 (405)
T ss_pred cCccCCcChhHHHHHHHhhhhhhheeecC-CccEEEeccccceeEEEEecCCcce--eeeec----CCchhheeeccccc
Confidence 1 1111110 111235678888 8998887764 46799999999888 66554 44446788999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCcccccCCCceeecCCCCeee
Q psy9598 825 DGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLN 866 (1915)
Q Consensus 825 dg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~~~~F~~d~~~Lv 866 (1915)
-...|++- ..|.|+||.... .+.--.|.||++.+.
T Consensus 304 ~rp~i~si-~sg~v~iw~~~~------~enwsafAPdFqele 338 (405)
T KOG1273|consen 304 VRPIIASI-ASGVVYIWAVVQ------VENWSAFAPDFQELE 338 (405)
T ss_pred ceeeeeec-cCCceEEEEeec------ccchhhcCchHHHHH
Confidence 98888888 669999998654 334446777776553
No 209
>cd05518 Bromo_polybromo_IV Bromodomain, polybromo repeat IV. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.82 E-value=1.3e-20 Score=186.53 Aligned_cols=94 Identities=29% Similarity=0.492 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHcCC------CCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhc
Q psy9598 1535 NECREVLETLWVCP------DSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~~------~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN 1608 (1915)
+++..|++.|.++. .+.+|+.+|++.++||||++|++||||+||++||.++.|.|+++|..||+|||.||+.||
T Consensus 3 ~~~~~l~~~v~~~~d~~gr~~~~~F~~~p~~~~~pdYy~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~D~~li~~Na~~yN 82 (103)
T cd05518 3 KRMLALFLYVLEYREGSGRRLCDLFMEKPSKKDYPDYYKIILEPIDLKTIEHNIRNDKYATEEELMDDFKLMFRNARHYN 82 (103)
T ss_pred HHHHHHHHHHHHhhccCCCcccHHHhcCCCcccCccHHHHcCCCcCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 56778888887653 388999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q psy9598 1609 QNKRSKIYIMTTRLSEFAEEH 1629 (1915)
Q Consensus 1609 ~~~~s~i~~~a~~l~~~f~~~ 1629 (1915)
+++ |.||.+|..|+++|+++
T Consensus 83 ~~~-s~i~~~A~~le~~~~~~ 102 (103)
T cd05518 83 EEG-SQVYEDANILEKVLKEK 102 (103)
T ss_pred CCC-CHHHHHHHHHHHHHHhc
Confidence 988 99999999999999864
No 210
>KOG0321|consensus
Probab=99.82 E-value=4.2e-19 Score=212.14 Aligned_cols=283 Identities=20% Similarity=0.303 Sum_probs=198.8
Q ss_pred ccCCCeEEEecccCCcee----eeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE--EeCCCCCEEE
Q psy9598 450 GPLSRSLMISSHKYSNLR----QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT--LRGCSGEISD 523 (1915)
Q Consensus 450 g~~d~~~~i~~~~~~~~~----~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~--l~gH~~~I~~ 523 (1915)
+.-+|.+.+.+.....+. ..+-...|.++|..+.|-|....|++++.|.+|++||+.++.++.. +.||.+.|.+
T Consensus 70 adE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS 149 (720)
T KOG0321|consen 70 ADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKS 149 (720)
T ss_pred ecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccch
Confidence 344556666544333333 1244578999999999999778899999999999999999998877 8999999999
Q ss_pred EEEeCCC-CEEEEEeCCCcEEEEECCCCc--------------------e-------EEEeecCCCCeEE---EEeccCc
Q psy9598 524 IAIDNRN-ILLAAGTVDKTIRIWNLQTLA--------------------P-------ISVLVGHQGIITG---VNFCPLE 572 (1915)
Q Consensus 524 Lafspdg-~~LaSgs~DgtIrVWDl~tg~--------------------~-------~~~l~~h~~~V~s---l~fsp~~ 572 (1915)
+||.+.+ ..|++|+.||.|.|||+.-.. + +.....|...|.+ +.+..
T Consensus 150 ~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fk-- 227 (720)
T KOG0321|consen 150 ECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFK-- 227 (720)
T ss_pred hhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEe--
Confidence 9999965 578999999999999985211 1 1111234444444 33333
Q ss_pred cCCCcEEEEEeC-CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCC
Q psy9598 573 VNGFNYLASTST-DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651 (1915)
Q Consensus 573 ~~d~~~L~sgs~-DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~ 651 (1915)
|..+|++++. |+.|+|||++.........-.....+... ......+.++.....|.+|++.+.|+.|++|++.+..
T Consensus 228 --De~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~-skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s 304 (720)
T KOG0321|consen 228 --DESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTH-SKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLS 304 (720)
T ss_pred --ccceeeeccCCCcceEEEeecccccccccCCCcccCccCc-ccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccC
Confidence 4478998887 99999999998754332221111111111 1123557889999999999999999999999995432
Q ss_pred CCceeEEeccCCCCe--eEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEE
Q psy9598 652 SPLGILEVEEHSDKV--DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAW 729 (1915)
Q Consensus 652 ~~~~i~~l~~h~~~V--~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~ 729 (1915)
...+..+.++...- ..-..+|++.+|++|+.|+.+.+|.+.+.+ .......+|...|++++|
T Consensus 305 -~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e---------------~~~~~l~Ght~eVt~V~w 368 (720)
T KOG0321|consen 305 -ISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE---------------APPALLLGHTREVTTVRW 368 (720)
T ss_pred -cCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc---------------CChhhhhCcceEEEEEee
Confidence 22333333333221 122368999999999999999999887654 122345678899999999
Q ss_pred CCCCCE-EEEEEecCCeEEEEECCCC
Q psy9598 730 DASDRW-VITAINFNFQIKIWDAFNG 754 (1915)
Q Consensus 730 spdg~~-L~t~s~~Dg~I~vwD~~tg 754 (1915)
.|.... +++++. |..++||++..+
T Consensus 369 ~pS~~t~v~TcSd-D~~~kiW~l~~~ 393 (720)
T KOG0321|consen 369 LPSATTPVATCSD-DFRVKIWRLSNG 393 (720)
T ss_pred ccccCCCceeecc-CcceEEEeccCc
Confidence 987543 555555 999999998654
No 211
>COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
Probab=99.82 E-value=1.7e-20 Score=231.51 Aligned_cols=217 Identities=24% Similarity=0.352 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHhc---CCCccCCCCCCCCCCCCCccccccCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhhhh
Q psy9598 1372 DATCEKIITGLEEVM---GLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448 (1915)
Q Consensus 1372 ~~~~~~i~~~~~~~~---~~~~~~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na~~y 1448 (1915)
.+.+..|...+.++. ++....+|+.+|+...+|+||.||+.||||.+|+++|+++.|.++++|..||.|||.||++|
T Consensus 144 ~~~~~~i~~~~~~~~~~~~~~~s~~F~~~p~k~~~PdYy~iIk~Pm~L~~i~kkl~~~~Y~s~eef~~D~~lM~~N~~~y 223 (371)
T COG5076 144 YADNKAIAKFKKQLFLRDGRFLSSIFLGLPSKREYPDYYEIIKSPMDLLTIQKKLKNGRYKSFEEFVSDLNLMFDNCKLY 223 (371)
T ss_pred HHHHHHHHHHHHHhhcccccccccccccCCccccCCChheeecchhhHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhhhc
Confidence 456666666666654 67788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhCCCCCCccchhhhhcccccCCCChhhhhhhhhhhccccCCcchhhhhHHHhhhhhcC
Q psy9598 1449 NEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSEEEEEEDSKSRQRRVRPTAVTRAQREAMNQKKLK 1528 (1915)
Q Consensus 1449 N~~~s~i~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1528 (1915)
|+|+|.++.+|+.|++.+...+...+...+......... ...
T Consensus 224 N~~~s~v~~~a~~l~~~~~~~i~~~~~~~~~~~~~~~~~-----------------------~~~--------------- 265 (371)
T COG5076 224 NGPDSSVYVDAKELEKYFLKLIEEIPEEMLELSIKPGRE-----------------------ERE--------------- 265 (371)
T ss_pred cCCCcchhhhhHHHHHHHHHHHHhccccchhhccCcccc-----------------------ccc---------------
Confidence 999999999999999999999997543322211100000 000
Q ss_pred CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhc
Q psy9598 1529 RPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608 (1915)
Q Consensus 1529 ~~~~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN 1608 (1915)
.+-..++.....+...|+|..+++....|+|+++|..+|++.|.+-++..+.|...++|..|..++|.||..||
T Consensus 266 ------~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (371)
T COG5076 266 ------ERESVLITNSQAHVGAWPFLRPVSDEEVPDYYKDIRDPMDLSTKELKLRNNYYRPEETFVRDAKLFFDNCVMYN 339 (371)
T ss_pred ------cchhhcccccccccccccccccCCcccccchhhhhhcccccccchhhhhcccCCCccccccccchhhhcccccc
Confidence 01122333445667799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 1609 QNKRSKIYIMTTRLSEFAEEHLRRL 1633 (1915)
Q Consensus 1609 ~~~~s~i~~~a~~l~~~f~~~~~~~ 1633 (1915)
... ..++.-+..+..++....+..
T Consensus 340 ~~~-~~~~~~~~~~~~~~~~~~~~~ 363 (371)
T COG5076 340 GEV-TDYYKNANVLEDFVIKKTRLI 363 (371)
T ss_pred hhh-hhhhhhccchhhhHhhhhhhh
Confidence 977 888888888888887766654
No 212
>KOG0302|consensus
Probab=99.82 E-value=8.4e-19 Score=198.38 Aligned_cols=214 Identities=19% Similarity=0.309 Sum_probs=177.8
Q ss_pred eEEecCCCCcEEEEEEcCCC--CEEEEEECCCcEEEEECCC----------------CcEEEEEeCCCCCEEEEEEeCCC
Q psy9598 469 HYVNLGHLSAVFCVLFDKLG--EVIVTGADDLLIKLWRARD----------------GKLLATLRGCSGEISDIAIDNRN 530 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspdg--~~LaTGs~Dg~I~IWd~~t----------------g~~~~~l~gH~~~I~~Lafspdg 530 (1915)
.....+|.+.|+-+..++-| .+.|+-+..|.|.||++.. .+++.++.+|.+.=+.|+|||-.
T Consensus 144 ~~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~ 223 (440)
T KOG0302|consen 144 EMKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIK 223 (440)
T ss_pred cccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccc
Confidence 34556888999998888755 5566667789999999742 35788999999999999999932
Q ss_pred -CEEEEEeCCCcEEEEECCCCceE---EEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccC
Q psy9598 531 -ILLAAGTVDKTIRIWNLQTLAPI---SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606 (1915)
Q Consensus 531 -~~LaSgs~DgtIrVWDl~tg~~~---~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~ 606 (1915)
..|+||..-+.|++|...+|.-. ..+.+|+..|-.|+|+|.. ...|++||.||+|+|||++.+.....+..
T Consensus 224 ~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE---~~vfaScS~DgsIrIWDiRs~~~~~~~~~-- 298 (440)
T KOG0302|consen 224 TGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE---DGVFASCSCDGSIRIWDIRSGPKKAAVST-- 298 (440)
T ss_pred ccccccCccccceEeeeeccCceeecCccccccccchhhhccCCcc---CceEEeeecCceEEEEEecCCCccceeEe--
Confidence 35888988899999999886532 2466899999999999954 58999999999999999998843333222
Q ss_pred ccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCC
Q psy9598 607 PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDG 685 (1915)
Q Consensus 607 ~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG 685 (1915)
..|.+.|+.++|+..-.+||+|+.||+++|||++.......+..+.-|..+|++|.|+|.. ..|++++.|.
T Consensus 299 --------kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~ 370 (440)
T KOG0302|consen 299 --------KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDN 370 (440)
T ss_pred --------eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCC
Confidence 3677899999999988899999999999999998877778889999999999999999864 5788999999
Q ss_pred cEEEEEccCC
Q psy9598 686 TALIWYYKCS 695 (1915)
Q Consensus 686 ~I~IWDl~~~ 695 (1915)
.|.|||+...
T Consensus 371 QitiWDlsvE 380 (440)
T KOG0302|consen 371 QITIWDLSVE 380 (440)
T ss_pred cEEEEEeecc
Confidence 9999998643
No 213
>KOG0267|consensus
Probab=99.82 E-value=2.6e-20 Score=224.88 Aligned_cols=256 Identities=21% Similarity=0.356 Sum_probs=220.2
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEE
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVN 567 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~ 567 (1915)
+-+++++..+..++||+... +..|...|.|+..-..++.+++|+.|..+-+|.+....++..|.+|..+|.||.
T Consensus 4 ~~~~m~~~~~t~Lr~~~~~~------~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~ 77 (825)
T KOG0267|consen 4 MEFLMKTKRATKLRVWDTRE------FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLT 77 (825)
T ss_pred ccccceeeeeeccccccchh------hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeee
Confidence 44556666667788888643 456888999999877889999999999999999988888888999999999999
Q ss_pred eccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEe
Q psy9598 568 FCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647 (1915)
Q Consensus 568 fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl 647 (1915)
|++.. .+|++|+.+|+|++||+.....+. .+.+|...+.++.|+|-|.+++.|+.|+.+++||+
T Consensus 78 f~~~E----~LlaagsasgtiK~wDleeAk~vr------------tLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~ 141 (825)
T KOG0267|consen 78 FDTSE----RLLAAGSASGTIKVWDLEEAKIVR------------TLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDI 141 (825)
T ss_pred cCcch----hhhcccccCCceeeeehhhhhhhh------------hhhccccCcceeeeccceEEeccccccccceehhh
Confidence 99854 899999999999999998775443 33456788999999999999999999999999999
Q ss_pred cCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEE
Q psy9598 648 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV 727 (1915)
Q Consensus 648 ~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 727 (1915)
+ ...+.+.+.+|...|.++.|+|+|.++++|+.|.+++|||+..+... ..+..|...+..+
T Consensus 142 R---k~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~----------------~ef~~~e~~v~sl 202 (825)
T KOG0267|consen 142 R---KKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLS----------------KEFKSHEGKVQSL 202 (825)
T ss_pred h---ccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccc----------------ccccccccccccc
Confidence 4 34567788899999999999999999999999999999999877632 2334577889999
Q ss_pred EECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecC
Q psy9598 728 AWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 728 a~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D 786 (1915)
.|+|..-+++.|+. |++|++||+.+.+.+.........|.++.|+| ++..+++|...
T Consensus 203 e~hp~e~Lla~Gs~-d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~-~~~~~~~G~q~ 259 (825)
T KOG0267|consen 203 EFHPLEVLLAPGSS-DRTVRFWDLETFEVISSGKPETDGVRSLAFNP-DGKIVLSGEQI 259 (825)
T ss_pred ccCchhhhhccCCC-CceeeeeccceeEEeeccCCccCCceeeeecC-CceeeecCchh
Confidence 99999888888888 99999999999999999988889999999999 88888887654
No 214
>cd05529 Bromo_WDR9_I_like Bromodomain; WDR9 repeat I_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional regulator involved in chromatin remodeling and play a role in embryonic development. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.82 E-value=7.9e-20 Score=188.76 Aligned_cols=103 Identities=45% Similarity=0.769 Sum_probs=98.5
Q ss_pred CCHHHHHHHHHHHHHhc---CCCccCCCCCCCCCC-CCCccccccCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhh
Q psy9598 1370 DRDATCEKIITGLEEVM---GLSVAEPFLVPVDIS-QYPAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANA 1445 (1915)
Q Consensus 1370 ~~~~~~~~i~~~~~~~~---~~~~~~~F~~pv~~~-~~p~Y~~~I~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na 1445 (1915)
..+..|.+|+..+++++ ++..+.+|..||++. .+|+||.+|++||||+||++||++++|+++++|..||+||+.||
T Consensus 21 ~~~~~~~~i~~~l~~l~~~~~~~~~~~F~~pv~~~~~~p~Y~~iI~~PmdL~tI~~kl~~~~Y~s~~~f~~Dv~Li~~Na 100 (128)
T cd05529 21 IRDEERERLISGLDKLLLSLQLEIAEYFEYPVDLRAWYPDYWNRVPVPMDLETIRSRLENRYYRSLEALRHDVRLILSNA 100 (128)
T ss_pred CCHHHHHHHHHHHHHHHhcccCcccccccCCCCccccCCcHHHHcCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 34678899999999999 999999999999999 99999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCHHHHHHHHHHHHHHHHHhC
Q psy9598 1446 EKFNEPHSNIVKYARIITDLLLRIIKE 1472 (1915)
Q Consensus 1446 ~~yN~~~s~i~~~a~~l~~~~~~~~~~ 1472 (1915)
++||+++|.|++.|..|.++|.+.+..
T Consensus 101 ~~yN~~~s~i~~~A~~l~~~~~~~l~~ 127 (128)
T cd05529 101 ETFNEPNSEIAKKAKRLSDWLLRILSS 127 (128)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999988764
No 215
>KOG2445|consensus
Probab=99.81 E-value=2.6e-18 Score=190.17 Aligned_cols=261 Identities=20% Similarity=0.294 Sum_probs=195.0
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC----CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEE
Q psy9598 515 RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT----LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590 (1915)
Q Consensus 515 ~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t----g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~i 590 (1915)
.+|..-|.|+.|.+.|+.+|+|+.|++|+|||... ..+....+.|.+.|..|.|.+.. -|+.++++|.|+++.|
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPE--fGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPE--FGQVVATCSYDRTVSI 87 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCcc--ccceEEEEecCCceee
Confidence 57899999999999999999999999999999643 45677888999999999998744 6899999999999999
Q ss_pred EecccCccccceecc-CccccccccCCCCCceEEEEECCC--CcEEEEEeCCCeEEEEEecCCC---CCceeEEe-----
Q psy9598 591 WKYKLDIDISKTVFH-EPVMFNERIRPGNAHILCSSFSPG--GLFLATGSGDHHVRVYKMDGVD---SPLGILEV----- 659 (1915)
Q Consensus 591 WDl~~~~~~~~~~~~-~~~~~~~~~~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~IwDl~~~~---~~~~i~~l----- 659 (1915)
|.-.... ...+ ..-.....+....+.|+.+.|.|. |-.||+++.||.|+||+.-... .......+
T Consensus 88 WEE~~~~----~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~ 163 (361)
T KOG2445|consen 88 WEEQEKS----EEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVID 163 (361)
T ss_pred eeecccc----cccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccC
Confidence 9753111 0000 011112233445688999999995 7789999999999999873221 11111122
Q ss_pred --ccCCCCeeEEEEcCC---CCEEEEEeCC-----CcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEE
Q psy9598 660 --EEHSDKVDSIQWSHS---HLRFVSGSRD-----GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAW 729 (1915)
Q Consensus 660 --~~h~~~V~sl~fspd---g~~L~sgs~D-----G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~ 729 (1915)
..+.....||.|++. ..+|++|+.+ +.++||....+.... .......++...|+.|+|
T Consensus 164 pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw------------~kva~L~d~~dpI~di~w 231 (361)
T KOG2445|consen 164 PPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKW------------LKVAELPDHTDPIRDISW 231 (361)
T ss_pred CcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCccee------------eeehhcCCCCCcceeeee
Confidence 246678889999975 3478888766 578999765443111 112233468899999999
Q ss_pred CCCC----CEEEEEEecCCeEEEEECCCC--------------------ceEEEeeCCCCCeEEEEEccCCCCEEEEEec
Q psy9598 730 DASD----RWVITAINFNFQIKIWDAFNG--------------------DLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 730 spdg----~~L~t~s~~Dg~I~vwD~~tg--------------------~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~ 785 (1915)
.|+- ..|++++. || |+||.+... +.+..+.+|.+.|+.+.|+- .|.+|++.|.
T Consensus 232 APn~Gr~y~~lAvA~k-Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNm-tGtiLsStGd 308 (361)
T KOG2445|consen 232 APNIGRSYHLLAVATK-DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNM-TGTILSSTGD 308 (361)
T ss_pred ccccCCceeeEEEeec-Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEee-eeeEEeecCC
Confidence 9973 45777777 99 999998621 34566789999999999998 9999999999
Q ss_pred CceEEEEECCC
Q psy9598 786 DGLIIIWDILS 796 (1915)
Q Consensus 786 DG~I~IWdl~s 796 (1915)
||+|++|...-
T Consensus 309 DG~VRLWkany 319 (361)
T KOG2445|consen 309 DGCVRLWKANY 319 (361)
T ss_pred Cceeeehhhhh
Confidence 99999997654
No 216
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.81 E-value=2.9e-16 Score=196.62 Aligned_cols=364 Identities=26% Similarity=0.437 Sum_probs=275.7
Q ss_pred EecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc-EEEEEeCCCC-CEEEEEE-eCCCC-EEEEEeC-CCcEEEE
Q psy9598 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK-LLATLRGCSG-EISDIAI-DNRNI-LLAAGTV-DKTIRIW 545 (1915)
Q Consensus 471 ~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~-~~~~l~gH~~-~I~~Laf-spdg~-~LaSgs~-DgtIrVW 545 (1915)
.+.+|...|.++.|.+.+..+++++.|+.|.+|+...+. .+..+.++.. .+..+.+ ++++. +++..+. |+.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 567899999999999999999999999999999998887 7777777544 7887777 78777 5555444 9999999
Q ss_pred ECCC-CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC-CCeEEEEecccCccccceeccCccccccccCCCCCceEE
Q psy9598 546 NLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST-DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 623 (1915)
Q Consensus 546 Dl~t-g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~-DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 623 (1915)
++.. +.....+..|...|.+++|+|.. .++++++. |+.+++|++..+..+... ..|...|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~v~~ 203 (466)
T COG2319 140 DLSTPGKLIRTLEGHSESVTSLAFSPDG----KLLASGSSLDGTIKLWDLRTGKPLSTL------------AGHTDPVSS 203 (466)
T ss_pred EecCCCeEEEEEecCcccEEEEEECCCC----CEEEecCCCCCceEEEEcCCCceEEee------------ccCCCceEE
Confidence 9998 88889999999999999999954 58888885 999999999874322222 236788999
Q ss_pred EEECCCCc-EEEEEeCCCeEEEEEecCCCCCceeE-EeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEee
Q psy9598 624 SSFSPGGL-FLATGSGDHHVRVYKMDGVDSPLGIL-EVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 701 (1915)
Q Consensus 624 l~fspdg~-~Lasgs~Dg~I~IwDl~~~~~~~~i~-~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~ 701 (1915)
++|+|++. .+++++.|+.|++||.. ....+. .+.+|...+ ...|++++.++++++.|+.+++|++.........
T Consensus 204 ~~~~~~~~~~~~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 279 (466)
T COG2319 204 LAFSPDGGLLIASGSSDGTIRLWDLS---TGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRT 279 (466)
T ss_pred EEEcCCcceEEEEecCCCcEEEEECC---CCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEE
Confidence 99999998 55555999999999874 334444 578888876 4489999989999999999999999876531100
Q ss_pred ecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee--CCCCCeEEEEEccCCCCE
Q psy9598 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK--GHTNEVFVLESHPFDSRV 779 (1915)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~--gH~~~V~sl~~sp~dg~~ 779 (1915)
...|...|.++.|+|++..+++++. |+.+.+|+..+........ +|...|..+.| +.++..
T Consensus 280 ---------------~~~~~~~v~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 342 (466)
T COG2319 280 ---------------LSGHSSSVLSVAFSPDGKLLASGSS-DGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPDGSL 342 (466)
T ss_pred ---------------EecCCccEEEEEECCCCCEEEEeeC-CCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCCCCE
Confidence 0235778999999999999998666 7889999999888777776 88888999999 524355
Q ss_pred EEEE-ecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCcccccCCC---
Q psy9598 780 LLSA-GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCAL-TDSYGHLLVYGLGGFKRPQNIPR--- 854 (1915)
Q Consensus 780 LaSg-s~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Las-g~~dG~I~Iwdl~s~~~~~~l~~--- 854 (1915)
++.+ ..|+.+.+|++..... ..... ....+..+.|++ ...++. +..++.+.+|++........+..
T Consensus 343 ~~~~~~~d~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (466)
T COG2319 343 LVSGGSDDGTIRLWDLRTGKP--LKTLE------GHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTS 413 (466)
T ss_pred EEEeecCCCcEEeeecCCCce--eEEec------CCceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCC
Confidence 5555 6889999999987652 22211 112288899988 544444 68889999999998776544443
Q ss_pred ---ceeecCCCCeeee-cCCCccceeeccc
Q psy9598 855 ---ELFFHTDYRTLNR-PNGLFEPTYDEVT 880 (1915)
Q Consensus 855 ---~~~F~~d~~~Lv~-~~~~~~~v~D~~t 880 (1915)
...+..++..++. .....+.+|+..+
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 414 RVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred cEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 2455566665553 2333345666555
No 217
>KOG1034|consensus
Probab=99.81 E-value=1e-18 Score=194.73 Aligned_cols=305 Identities=18% Similarity=0.251 Sum_probs=222.4
Q ss_pred EecCCCCcEEEEEEcC-----CCCEEEEEECCCcEEEEECCCC---cEEEEEe--CCCCCEEEEEEeCC----CCEEEEE
Q psy9598 471 VNLGHLSAVFCVLFDK-----LGEVIVTGADDLLIKLWRARDG---KLLATLR--GCSGEISDIAIDNR----NILLAAG 536 (1915)
Q Consensus 471 ~l~gH~~~V~~vafsp-----dg~~LaTGs~Dg~I~IWd~~tg---~~~~~l~--gH~~~I~~Lafspd----g~~LaSg 536 (1915)
...+|..+|+.++|.+ .-..+||.|.+ .|.||..... .+++++. .|......++|+-+ +-+||+|
T Consensus 33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~ 111 (385)
T KOG1034|consen 33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAG 111 (385)
T ss_pred hhccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEee
Confidence 3468999999999984 23456666654 8889987543 3444442 36777888899764 4489999
Q ss_pred eCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCC
Q psy9598 537 TVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 537 s~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
+.-|.|+|.|+.++++...+.+|.+.|+.|.|+|.. .++|++||.|.+|++|++.+..++..+. ...+
T Consensus 112 G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~---~qlvls~SkD~svRlwnI~~~~Cv~VfG---------G~eg 179 (385)
T KOG1034|consen 112 GYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDR---PQLVLSASKDHSVRLWNIQTDVCVAVFG---------GVEG 179 (385)
T ss_pred cceeEEEEEecchhhhccceeccCccchhhhcCCCC---CcEEEEecCCceEEEEeccCCeEEEEec---------cccc
Confidence 999999999999999999999999999999999964 4899999999999999999997755443 2347
Q ss_pred CCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCC------------------------CCceeE-EeccCCCCeeEEEE
Q psy9598 617 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD------------------------SPLGIL-EVEEHSDKVDSIQW 671 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~------------------------~~~~i~-~l~~h~~~V~sl~f 671 (1915)
|...|.++.|+++|.+|+++|.|.+|++|++.... .....+ +..-|...|.|+.|
T Consensus 180 HrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw 259 (385)
T KOG1034|consen 180 HRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRW 259 (385)
T ss_pred ccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHH
Confidence 88999999999999999999999999999996110 000111 23458888888888
Q ss_pred cCCCCEEEEEeCCCcEEEEEcc-CCceEEeeecccccCCCCccccccccccccE--EEEEECCCCCEEEEEEecCCeEEE
Q psy9598 672 SHSHLRFVSGSRDGTALIWYYK-CSQWRFIRLDMNTCLPHTKETSDETNKKIKV--TMVAWDASDRWVITAINFNFQIKI 748 (1915)
Q Consensus 672 spdg~~L~sgs~DG~I~IWDl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--~~va~spdg~~L~t~s~~Dg~I~v 748 (1915)
- |.++++-|-++.|..|... -.+-........ ..........-....| ...+|++-++.|+++.. .|.|.+
T Consensus 260 ~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~e---s~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq-~g~v~v 333 (385)
T KOG1034|consen 260 F--GDFILSKSCENAIVCWKPGKLEESIHNVKPPE---SATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQ-SGKVYV 333 (385)
T ss_pred H--hhheeecccCceEEEEecchhhhhhhccCCCc---cceeeeeEeccCccceEEEEEeecHHHHHHhhccC-CCcEEE
Confidence 6 5699999999999999762 221100000000 0000001111122333 44566777889999888 999999
Q ss_pred EECCCCceE--EEeeC--CCCCeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 749 WDAFNGDLV--QVLKG--HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 749 wD~~tg~~i--~~l~g--H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
||+....+. .++.. ....|...+|+. ++.+|+....||+|.-||..
T Consensus 334 wdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~-dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 334 WDLDNNEPPKCTTLTHSKSGSTVRQTSFSR-DGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred EECCCCCCccCceEEeccccceeeeeeecc-cCcEEEEEeCCCcEEEEEee
Confidence 999876552 22322 234688899998 99999999999999999864
No 218
>KOG0322|consensus
Probab=99.80 E-value=4.8e-19 Score=191.96 Aligned_cols=301 Identities=20% Similarity=0.252 Sum_probs=217.1
Q ss_pred eEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEe-CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC
Q psy9598 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR-GCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 547 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~-gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl 547 (1915)
.+.|++|.+.|+|+.|..+++ |++|..-|.|++|++.+...+..++ .|...|+.+.--|+ ..|.+-+.|+.+.+|++
T Consensus 7 ~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~i 84 (323)
T KOG0322|consen 7 FFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTI 84 (323)
T ss_pred eeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEc
Confidence 457779999999999998875 8999999999999999999888888 66778999998887 46888889999999999
Q ss_pred CCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC-eEEEEecccCccccceeccCcc---ccccccCCCCCceEE
Q psy9598 548 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG-CIGFWKYKLDIDISKTVFHEPV---MFNERIRPGNAHILC 623 (1915)
Q Consensus 548 ~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg-tI~iWDl~~~~~~~~~~~~~~~---~~~~~~~~~~~~V~~ 623 (1915)
.-+..+ ..|+-.++++.|++.. |+..+... .+-+++-+............+. .....-.+..+.+.|
T Consensus 85 a~s~~i---~i~Si~~nslgFCrfS------l~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc 155 (323)
T KOG0322|consen 85 AYSAFI---SIHSIVVNSLGFCRFS------LVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMC 155 (323)
T ss_pred cCcceE---EEeeeeccccccccce------eccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceee
Confidence 865433 3356678888888843 33333222 2222222211110000000000 000111233466777
Q ss_pred EEECCC-C--cEEEEEeCCCeEEEEEecCCC-------CCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 624 SSFSPG-G--LFLATGSGDHHVRVYKMDGVD-------SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 624 l~fspd-g--~~Lasgs~Dg~I~IwDl~~~~-------~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
..+... + -+|++|..+|.|.+||+.... ..........|..+|.++.|.+....=++|+.+..+..|.+.
T Consensus 156 ~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~ 235 (323)
T KOG0322|consen 156 QDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLN 235 (323)
T ss_pred eeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeec
Confidence 765432 2 357788999999999995431 112223345799999999999877777889999999999876
Q ss_pred CCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEc
Q psy9598 694 CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESH 773 (1915)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~s 773 (1915)
...-. .............|..+.+-||++.+++++. ||.|+||+.++..++.+|+-|.+.|++++|+
T Consensus 236 ~s~gs------------lq~~~e~~lknpGv~gvrIRpD~KIlATAGW-D~RiRVyswrtl~pLAVLkyHsagvn~vAfs 302 (323)
T KOG0322|consen 236 HSTGS------------LQIRKEITLKNPGVSGVRIRPDGKILATAGW-DHRIRVYSWRTLNPLAVLKYHSAGVNAVAFS 302 (323)
T ss_pred cccCc------------ccccceEEecCCCccceEEccCCcEEeeccc-CCcEEEEEeccCCchhhhhhhhcceeEEEeC
Confidence 43200 0011112224456788999999999999999 9999999999999999999999999999999
Q ss_pred cCCCCEEEEEecCceEEEEEC
Q psy9598 774 PFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 774 p~dg~~LaSgs~DG~I~IWdl 794 (1915)
| +..++|+||.|++|.+|++
T Consensus 303 p-d~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 303 P-DCELMAAASKDARISLWKL 322 (323)
T ss_pred C-CCchhhhccCCceEEeeec
Confidence 9 8899999999999999987
No 219
>cd05521 Bromo_Rsc1_2_I Bromodomain, repeat I in Rsc1/2_like subfamily, specific to fungi. Rsc1 and Rsc2 are components of the RSC complex (remodeling the structure of chromatin), are essential for transcriptional control, and have a specific domain architecture including two bromodomains. The RSC complex has also been linked to homologous recombination and nonhomologous end-joining repair of DNA double strand breaks. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.80 E-value=8e-20 Score=181.49 Aligned_cols=96 Identities=24% Similarity=0.438 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhh
Q psy9598 118 WKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191 (1915)
Q Consensus 118 ~~~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~ 191 (1915)
+.++|..|++.|++..+ +.+|..+++...+||||++|++||||+||++||++ |.++++|..||.|||.||+.
T Consensus 2 l~~~~~~l~~~i~~~~~~~g~~~~~~F~~lp~~~~~pdYy~iI~~PmdL~tI~~kl~~--Y~s~~ef~~D~~li~~Na~~ 79 (106)
T cd05521 2 LSKKLKPLYDGIYTLKEENGIEIHPIFNVLPLRKDYPDYYKIIKNPLSLNTVKKRLPH--YTNAQEFVNDLAQIPWNARL 79 (106)
T ss_pred HHHHHHHHHHHHHhhcCcCCCCchHhhhcCCccccCccHHHHhcCCCCHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHH
Confidence 56789999999998665 47999999999999999999999999999999998 99999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHH
Q psy9598 192 YNQNKRSKIYIMTTRLSEFAEEHLR 216 (1915)
Q Consensus 192 yN~~~~s~i~~~a~~l~~~f~~~~~ 216 (1915)
||+++ |.+|.+|..|+++|.+++.
T Consensus 80 yN~~~-s~i~~~A~~le~~~~~~~~ 103 (106)
T cd05521 80 YNTKG-SVIYKYALILEKYINDVII 103 (106)
T ss_pred HcCCC-CHHHHHHHHHHHHHHHhhc
Confidence 99977 9999999999999998764
No 220
>cd05522 Bromo_Rsc1_2_II Bromodomain, repeat II in Rsc1/2_like subfamily, specific to fungi. Rsc1 and Rsc2 are components of the RSC complex (remodeling the structure of chromatin), are essential for transcriptional control, and have a specific domain architecture including two bromodomains. The RSC complex has also been linked to homologous recombination and nonhomologous end-joining repair of DNA double strand breaks. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.80 E-value=1.1e-19 Score=181.12 Aligned_cols=95 Identities=25% Similarity=0.384 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhh
Q psy9598 119 KNECREVLETLWV------CPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192 (1915)
Q Consensus 119 ~~~~~~il~~l~~------~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~y 192 (1915)
.+++..|++.|++ ++.++||..+|+...+||||++|++||||+||++||.++.|.++++|..||+|||.||+.|
T Consensus 3 ~~~~~~i~~~v~~~~d~~g~~l~~~F~~~p~~~~~pdYy~~I~~Pmdl~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~y 82 (104)
T cd05522 3 EARIKNILKGLRKERDENGRLLTLHFEKLPDKAREPEYYQEISNPISLDDIKKKVKRRKYKSFDQFLNDLNLMFENAKLY 82 (104)
T ss_pred HHHHHHHHHHHHHHhCcCCCcccHHHhcCCCccccCcHHHHhCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4567777777776 4458999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHH
Q psy9598 193 NQNKRSKIYIMTTRLSEFAEEH 214 (1915)
Q Consensus 193 N~~~~s~i~~~a~~l~~~f~~~ 214 (1915)
|+++ |.+|.+|..|++.|+++
T Consensus 83 n~~~-s~i~~~A~~l~~~f~~l 103 (104)
T cd05522 83 NEND-SQEYKDAVLLEKEARLL 103 (104)
T ss_pred CCCC-CHHHHHHHHHHHHHHHh
Confidence 9977 99999999999999974
No 221
>smart00297 BROMO bromo domain.
Probab=99.80 E-value=1.6e-19 Score=183.48 Aligned_cols=100 Identities=38% Similarity=0.616 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q psy9598 117 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~ 196 (1915)
.+...|..|++.+.+++.+++|..||+...+|+||++|++||||+||++||+++.|.|+++|..||+|||.||+.||+++
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~F~~~~~~~~~p~Y~~~i~~P~dl~~I~~kl~~~~Y~s~~ef~~D~~li~~Na~~~n~~~ 86 (107)
T smart00297 7 KLQSLLKAVLDKLDSHRLSWPFLKPVDRKEAPDYYDIIKKPMDLSTIKKKLENGKYSSVEEFVADVQLMFSNAKTYNGPD 86 (107)
T ss_pred HHHHHHHHHHHHHHhCccchhhccCCChhhccCHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 56788999999999999999999999998999999999999999999999999999999999999999999999999966
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q psy9598 197 RSKIYIMTTRLSEFAEEHLRR 217 (1915)
Q Consensus 197 ~s~i~~~a~~l~~~f~~~~~~ 217 (1915)
+.++.+|..|++.|++.|++
T Consensus 87 -s~~~~~a~~l~~~f~~~~~~ 106 (107)
T smart00297 87 -SEVYKDAKKLEKFFEKKLRE 106 (107)
T ss_pred -CHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999876
No 222
>KOG1963|consensus
Probab=99.80 E-value=1.2e-16 Score=199.25 Aligned_cols=378 Identities=15% Similarity=0.233 Sum_probs=253.2
Q ss_pred ecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCC---CEEEEEeCCCcEEEEECC
Q psy9598 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN---ILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg---~~LaSgs~DgtIrVWDl~ 548 (1915)
|.|-...-..-.||+|+++|+....+ .|.||.+.||.++..+.+|..+++.+.+.+.. .++++++.||+|++||..
T Consensus 12 lgg~n~~~~~avfSnD~k~l~~~~~~-~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~ 90 (792)
T KOG1963|consen 12 LGGRNGNKSPAVFSNDAKFLFLCTGN-FVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWS 90 (792)
T ss_pred eccccceecccccccCCcEEEEeeCC-EEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCC
Confidence 44444444445689999999988765 99999999999999999999999999998754 477899999999999999
Q ss_pred CCceEEEeecCCCCeEEEEeccCccC----------CCcEEEEEe-----------------------------------
Q psy9598 549 TLAPISVLVGHQGIITGVNFCPLEVN----------GFNYLASTS----------------------------------- 583 (1915)
Q Consensus 549 tg~~~~~l~~h~~~V~sl~fsp~~~~----------d~~~L~sgs----------------------------------- 583 (1915)
.+..+.++..+. .|.++.+.|.... +...+.+++
T Consensus 91 ~~~Llkt~~~~~-~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~ 169 (792)
T KOG1963|consen 91 DGELLKTFDNNL-PVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDN 169 (792)
T ss_pred CcEEEEEEecCC-ceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEc
Confidence 888877765432 2222222121100 001111111
Q ss_pred ---------CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecC-CCCC
Q psy9598 584 ---------TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSP 653 (1915)
Q Consensus 584 ---------~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~-~~~~ 653 (1915)
.+..+.+|...... .. .........|...++|.+++|.++++|+|..||.|.+|.--+ ....
T Consensus 170 ~~ge~~~i~~~~~~~~~~v~~~~---~~-----~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~ 241 (792)
T KOG1963|consen 170 NSGEFKGIVHMCKIHIYFVPKHT---KH-----TSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDS 241 (792)
T ss_pred CCceEEEEEEeeeEEEEEecccc---ee-----eccchhhhhhcccceeEEeccccceEEEeccCCcEEEEecccccccc
Confidence 11112222222211 00 000011123455589999999999999999999999997544 2334
Q ss_pred ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCC
Q psy9598 654 LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733 (1915)
Q Consensus 654 ~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg 733 (1915)
.....+.-|...|.+++|+++|.+|++|+..|.+.+|.+.++.... +....+.|..+.++||+
T Consensus 242 ~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqf-----------------LPRLgs~I~~i~vS~ds 304 (792)
T KOG1963|consen 242 ETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQF-----------------LPRLGSPILHIVVSPDS 304 (792)
T ss_pred ccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCccc-----------------ccccCCeeEEEEEcCCC
Confidence 4455678899999999999999999999999999999998876221 22356789999999999
Q ss_pred CEEEEEEecCCeEEEEECCCCceEEEeeCC-----------CCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccc
Q psy9598 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGH-----------TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGY 802 (1915)
Q Consensus 734 ~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH-----------~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~ 802 (1915)
.+.++... |+.|.+....+.....++.|- .+-.+.++++| ..+.++-.+..|+|.+||+.+... +
T Consensus 305 ~~~sl~~~-DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idp-r~~~~vln~~~g~vQ~ydl~td~~--i 380 (792)
T KOG1963|consen 305 DLYSLVLE-DNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDP-RTNSLVLNGHPGHVQFYDLYTDST--I 380 (792)
T ss_pred CeEEEEec-CceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcC-CCCceeecCCCceEEEEeccccce--e
Confidence 99999988 999999987655444433322 23356667777 555666677777777777654322 1
Q ss_pred ee---------------------------------------------------------------eeeeecCCCCcc-eE
Q psy9598 803 KW---------------------------------------------------------------FHNIVEGQGEGA-LF 818 (1915)
Q Consensus 803 ~~---------------------------------------------------------------~~~~~~~~~~~~-V~ 818 (1915)
.. +...+...|... +.
T Consensus 381 ~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~va 460 (792)
T KOG1963|consen 381 YKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVA 460 (792)
T ss_pred eeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEE
Confidence 11 111111222222 33
Q ss_pred EEEEcCCCC-EEEEEeCCCeEEEEeCCCCccccc---------------C-CCceeecCCCCeeeecCCCccceeeccc
Q psy9598 819 DGKWSPDGT-TCALTDSYGHLLVYGLGGFKRPQN---------------I-PRELFFHTDYRTLNRPNGLFEPTYDEVT 880 (1915)
Q Consensus 819 ~vafSpdg~-~Lasg~~dG~I~Iwdl~s~~~~~~---------------l-~~~~~F~~d~~~Lv~~~~~~~~v~D~~t 880 (1915)
.+.+++... .+++++.||.++||-+.+.+.+.. . ...+.|+.||..|.....+.+.+||-.+
T Consensus 461 t~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 461 TIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDDTITIWDYDT 539 (792)
T ss_pred EEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecCCEEEEecCCC
Confidence 333344333 889999999999999954332211 1 1267899999999988888888999776
No 223
>KOG1009|consensus
Probab=99.79 E-value=8e-18 Score=192.74 Aligned_cols=312 Identities=16% Similarity=0.234 Sum_probs=217.0
Q ss_pred CCcEEEEEEcCCCC-EEEEEECCCcEEEEECCCC---------cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy9598 476 LSAVFCVLFDKLGE-VIVTGADDLLIKLWRARDG---------KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIW 545 (1915)
Q Consensus 476 ~~~V~~vafspdg~-~LaTGs~Dg~I~IWd~~tg---------~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVW 545 (1915)
..+|+++.|..++. .||||+.|..|+||-+..+ ..+..|..|...|+++.|+|+|.+||||+.+|.|.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 47899999998766 9999999999999987543 2455788999999999999999999999999999999
Q ss_pred ECC--------C--------CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccc
Q psy9598 546 NLQ--------T--------LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 609 (1915)
Q Consensus 546 Dl~--------t--------g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~ 609 (1915)
-.. + ......+.+|...|..++|+|+ +.++++++-|.++++||+..+.....
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d----~~~l~s~s~dns~~l~Dv~~G~l~~~-------- 160 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPD----SNFLVSGSVDNSVRLWDVHAGQLLAI-------- 160 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCC----CceeeeeeccceEEEEEeccceeEee--------
Confidence 765 2 2335567889999999999995 49999999999999999998864333
Q ss_pred cccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC-CCeeEEEEcCCCCEEEEEeCCCcEE
Q psy9598 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS-DKVDSIQWSHSHLRFVSGSRDGTAL 688 (1915)
Q Consensus 610 ~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~-~~V~sl~fspdg~~L~sgs~DG~I~ 688 (1915)
+..|...+..++|.|-+.++++-+.|...+++.+..... ...|. ..+.+-++.+.......-..|.++.
T Consensus 161 ----~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~------~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlk 230 (434)
T KOG1009|consen 161 ----LDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQV------IKRHGLDIMPAKAFNEREGKSTRLFHDETLK 230 (434)
T ss_pred ----ccccccccceeecchhhhhhhhhccCcccceeeeeeeee------eeeeeeeEeeecccCCCCcceeeeeecCchh
Confidence 235678899999999999999999998777777622111 11111 1111112222211111111222211
Q ss_pred EEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe---cCC-----eEEEEECCC-CceEEE
Q psy9598 689 IWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN---FNF-----QIKIWDAFN-GDLVQV 759 (1915)
Q Consensus 689 IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~---~Dg-----~I~vwD~~t-g~~i~~ 759 (1915)
.-...++|+|+|.+|++... .++ ..++|+-.. ..++..
T Consensus 231 ---------------------------------sFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~ 277 (434)
T KOG1009|consen 231 ---------------------------------SFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAAR 277 (434)
T ss_pred ---------------------------------hhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceee
Confidence 12334677788877776432 011 223343221 234555
Q ss_pred eeCCCCCeEEEEEccC-----------------CCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEE
Q psy9598 760 LKGHTNEVFVLESHPF-----------------DSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW 822 (1915)
Q Consensus 760 l~gH~~~V~sl~~sp~-----------------dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vaf 822 (1915)
+.+...++..+.|+|. -.-.+|.++ ...|+|||..+..+ +..+. +.|-.+|++++|
T Consensus 278 lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydtq~~~P--~~~v~----nihy~~iTDiaw 350 (434)
T KOG1009|consen 278 LPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDTQTLEP--LAVVD----NIHYSAITDIAW 350 (434)
T ss_pred cCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEeccccccc--eEEEe----eeeeeeecceee
Confidence 5555556666666541 122344454 45899999988777 54443 456789999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCccc
Q psy9598 823 SPDGTTCALTDSYGHLLVYGLGGFKRP 849 (1915)
Q Consensus 823 Spdg~~Lasg~~dG~I~Iwdl~s~~~~ 849 (1915)
++||..|+..+.||.+.+..+...+..
T Consensus 351 s~dg~~l~vSS~DGyCS~vtfe~~elg 377 (434)
T KOG1009|consen 351 SDDGSVLLVSSTDGFCSLVTFEPWELG 377 (434)
T ss_pred cCCCcEEEEeccCCceEEEEEcchhcc
Confidence 999999999999999999888876654
No 224
>KOG1445|consensus
Probab=99.79 E-value=2.6e-17 Score=194.57 Aligned_cols=193 Identities=18% Similarity=0.267 Sum_probs=137.3
Q ss_pred eCCCeEEEEEecCCCC-CceeEEeccCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccc
Q psy9598 637 SGDHHVRVYKMDGVDS-PLGILEVEEHSDKVDSIQWSH-SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKET 714 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~-~~~i~~l~~h~~~V~sl~fsp-dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~ 714 (1915)
+..|.|-||+++.... +..+..--.....|+.++|.| |...|++++.||.|+||.+..+.... +.....
T Consensus 600 g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e---------~~~tPe 670 (1012)
T KOG1445|consen 600 GSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPE---------NEMTPE 670 (1012)
T ss_pred CCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCc---------ccCCcc
Confidence 3456677777743221 111111111345688999988 45689999999999999887654211 111223
Q ss_pred cccccccccEEEEEECCCCC-EEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEE
Q psy9598 715 SDETNKKIKVTMVAWDASDR-WVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793 (1915)
Q Consensus 715 ~~~~~~~~~V~~va~spdg~-~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWd 793 (1915)
.....|...|+++.|+|-.. .|++++. |.+|++||+.++.....|.||.+.|++++|+| +|+.++|.+.||+|+||+
T Consensus 671 ~~lt~h~eKI~slRfHPLAadvLa~asy-d~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSp-dGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 671 KILTIHGEKITSLRFHPLAADVLAVASY-DSTIELWDLANAKLYSRLVGHTDQIFGIAWSP-DGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred eeeecccceEEEEEecchhhhHhhhhhc-cceeeeeehhhhhhhheeccCcCceeEEEECC-CCcceeeeecCceEEEeC
Confidence 44667889999999999654 4555665 99999999999999999999999999999999 999999999999999999
Q ss_pred CCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCC----CeEEEEeCCC
Q psy9598 794 ILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY----GHLLVYGLGG 845 (1915)
Q Consensus 794 l~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~d----G~I~Iwdl~s 845 (1915)
-.++... +..-. +...+.-..+.|.-||++|++.+.| .+|.+|+...
T Consensus 749 Prs~e~p-v~Eg~----gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 749 PRSREQP-VYEGK----GPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT 799 (1012)
T ss_pred CCCCCCc-cccCC----CCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence 9877651 11100 0011223456788899999988765 4588888664
No 225
>cd05521 Bromo_Rsc1_2_I Bromodomain, repeat I in Rsc1/2_like subfamily, specific to fungi. Rsc1 and Rsc2 are components of the RSC complex (remodeling the structure of chromatin), are essential for transcriptional control, and have a specific domain architecture including two bromodomains. The RSC complex has also been linked to homologous recombination and nonhomologous end-joining repair of DNA double strand breaks. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.79 E-value=1.5e-19 Score=179.51 Aligned_cols=96 Identities=24% Similarity=0.438 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhh
Q psy9598 1533 WKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 1606 (1915)
Q Consensus 1533 ~~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~ 1606 (1915)
+.++|..|++.|++.++ +.+|..+|++.++||||++|++||||+||++||++ |.|+++|..||.|||+||+.
T Consensus 2 l~~~~~~l~~~i~~~~~~~g~~~~~~F~~lp~~~~~pdYy~iI~~PmdL~tI~~kl~~--Y~s~~ef~~D~~li~~Na~~ 79 (106)
T cd05521 2 LSKKLKPLYDGIYTLKEENGIEIHPIFNVLPLRKDYPDYYKIIKNPLSLNTVKKRLPH--YTNAQEFVNDLAQIPWNARL 79 (106)
T ss_pred HHHHHHHHHHHHHhhcCcCCCCchHhhhcCCccccCccHHHHhcCCCCHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHH
Confidence 56789999999998766 46999999999999999999999999999999998 99999999999999999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHH
Q psy9598 1607 YNQNKRSKIYIMTTRLSEFAEEHLR 1631 (1915)
Q Consensus 1607 yN~~~~s~i~~~a~~l~~~f~~~~~ 1631 (1915)
||+++ |.+|.+|..|+++|.+++.
T Consensus 80 yN~~~-s~i~~~A~~le~~~~~~~~ 103 (106)
T cd05521 80 YNTKG-SVIYKYALILEKYINDVII 103 (106)
T ss_pred HcCCC-CHHHHHHHHHHHHHHHhhc
Confidence 99988 9999999999999998764
No 226
>KOG0302|consensus
Probab=99.79 E-value=2.7e-18 Score=194.27 Aligned_cols=268 Identities=19% Similarity=0.279 Sum_probs=193.5
Q ss_pred eecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccc-ee--c-cCccccccccCCCCCceEEEEECCCC-
Q psy9598 556 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK-TV--F-HEPVMFNERIRPGNAHILCSSFSPGG- 630 (1915)
Q Consensus 556 l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~-~~--~-~~~~~~~~~~~~~~~~V~~l~fspdg- 630 (1915)
..+|.+.|+-+...+.+ +..+.++-+..|.|.||++........ .. . .........+.+|...-+.++|||-.
T Consensus 147 ~i~h~g~~NRvr~~~~~--~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~ 224 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLG--NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKT 224 (440)
T ss_pred ccccccccceeeecccC--CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccc
Confidence 34677888888777754 456788888999999999865321100 00 0 01111223455677888999999932
Q ss_pred cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCC
Q psy9598 631 LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 709 (1915)
Q Consensus 631 ~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~ 709 (1915)
..|++|.--+.|++|....+.-..-...+.+|+..|-.|+|||.. ..|+|||.||+|+|||++.+....
T Consensus 225 g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~---------- 294 (440)
T KOG0302|consen 225 GRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKA---------- 294 (440)
T ss_pred cccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccc----------
Confidence 248888888899999986533222333467899999999999975 489999999999999999874211
Q ss_pred CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC---CceEEEeeCCCCCeEEEEEccCCCCEEEEEecC
Q psy9598 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN---GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 710 ~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t---g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D 786 (1915)
......|...|+.|.|+..-.+|++|+. ||+++|||+++ ++++..|+-|..+|++|.|+|.+...|+++|.|
T Consensus 295 ----~~~~kAh~sDVNVISWnr~~~lLasG~D-dGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D 369 (440)
T KOG0302|consen 295 ----AVSTKAHNSDVNVISWNRREPLLASGGD-DGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGED 369 (440)
T ss_pred ----eeEeeccCCceeeEEccCCcceeeecCC-CceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCC
Confidence 1122558889999999999888888888 99999999875 678999999999999999999888999999999
Q ss_pred ceEEEEECCCCcc---------ccceeeee--eecCCCCcceEEEEEcCC-CCEEEEEeCCCeEEE
Q psy9598 787 GLIIIWDILSSKQ---------RGYKWFHN--IVEGQGEGALFDGKWSPD-GTTCALTDSYGHLLV 840 (1915)
Q Consensus 787 G~I~IWdl~s~~~---------~~~~~~~~--~~~~~~~~~V~~vafSpd-g~~Lasg~~dG~I~I 840 (1915)
..|.|||+....- .++..+.. ++..++...|..+.|++. ..+|++++.||.-.+
T Consensus 370 ~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVf 435 (440)
T KOG0302|consen 370 NQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVF 435 (440)
T ss_pred CcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEE
Confidence 9999999964221 01111111 111234567888999985 457777777775433
No 227
>KOG0307|consensus
Probab=99.79 E-value=7.7e-19 Score=223.62 Aligned_cols=296 Identities=21% Similarity=0.357 Sum_probs=217.8
Q ss_pred EEEEeCCCC-EEEEE----------eCCCcEEEEECCC--C----ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCC
Q psy9598 523 DIAIDNRNI-LLAAG----------TVDKTIRIWNLQT--L----APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585 (1915)
Q Consensus 523 ~Lafspdg~-~LaSg----------s~DgtIrVWDl~t--g----~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D 585 (1915)
.++|+|.+. +||+| +.+.++-||.+.- . +++..+. .....+.++|++.+.+...+|+.|..|
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~ed 89 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLED 89 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccC
Confidence 467888775 45554 2345566665532 2 2333332 234678999999764444579999999
Q ss_pred CeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCc-EEEEEeCCCeEEEEEecCCCCCceeEEeccCCC
Q psy9598 586 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL-FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD 664 (1915)
Q Consensus 586 gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~-~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~ 664 (1915)
|.|.+||...- ..............|.+.|..+.|++... +||+|+.||.|.|||+.....+.... -....+
T Consensus 90 G~I~ly~p~~~------~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~-~~~~~~ 162 (1049)
T KOG0307|consen 90 GNIVLYDPASI------IANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG-SQAPPS 162 (1049)
T ss_pred CceEEecchhh------ccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-CCCCcc
Confidence 99999997652 01112223345567889999999999654 99999999999999997654443332 223567
Q ss_pred CeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC-EEEEEEec
Q psy9598 665 KVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR-WVITAINF 742 (1915)
Q Consensus 665 ~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~-~L~t~s~~ 742 (1915)
.|.+|+|+..- ..|++++.+|.+.|||++..+.+.. .........+..++|+|++. .|++++..
T Consensus 163 eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~--------------ls~~~~~~~~S~l~WhP~~aTql~~As~d 228 (1049)
T KOG0307|consen 163 EIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIK--------------LSDTPGRMHCSVLAWHPDHATQLLVASGD 228 (1049)
T ss_pred cceEeccchhhhHHhhccCCCCCceeccccCCCcccc--------------cccCCCccceeeeeeCCCCceeeeeecCC
Confidence 89999998654 4688999999999999997753221 11222335688999999874 45555542
Q ss_pred CC--eEEEEECCC-CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEE
Q psy9598 743 NF--QIKIWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFD 819 (1915)
Q Consensus 743 Dg--~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~ 819 (1915)
|+ .|.+||++. ...++++.+|...|.+|.|++.|..+|+|+|.|+.|.+|+..+++. +..+. .....++.
T Consensus 229 d~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv--l~~~p-----~~~nW~fd 301 (1049)
T KOG0307|consen 229 DSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV--LGELP-----AQGNWCFD 301 (1049)
T ss_pred CCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE--eeecC-----CCCcceee
Confidence 33 699999875 4678888999999999999998889999999999999999999988 66554 34578999
Q ss_pred EEEcCC-CCEEEEEeCCCeEEEEeCCCCc
Q psy9598 820 GKWSPD-GTTCALTDSYGHLLVYGLGGFK 847 (1915)
Q Consensus 820 vafSpd-g~~Lasg~~dG~I~Iwdl~s~~ 847 (1915)
+.|+|. -..|++++-+|.|.||.+.+..
T Consensus 302 v~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 302 VQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeecCCCcchhhhheeccceeeeeeecCC
Confidence 999995 4589999999999999998654
No 228
>KOG0270|consensus
Probab=99.79 E-value=1.4e-17 Score=192.73 Aligned_cols=301 Identities=19% Similarity=0.224 Sum_probs=210.2
Q ss_pred EEEEEeCCCCEEEEEeCC---Cc--EEEEECCCCceEEEeecCC----CCeEEEEeccC---ccCCCcEEEEEeCCCeEE
Q psy9598 522 SDIAIDNRNILLAAGTVD---KT--IRIWNLQTLAPISVLVGHQ----GIITGVNFCPL---EVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 522 ~~Lafspdg~~LaSgs~D---gt--IrVWDl~tg~~~~~l~~h~----~~V~sl~fsp~---~~~d~~~L~sgs~DgtI~ 589 (1915)
-.+.+-|..++|++|-.. .. |+||+-. ..- .+..|. ....|+.|... ..+.++++|.|+.|..|.
T Consensus 129 de~~V~psDnlIl~ar~eddvs~LEvYVyn~~--e~n-lYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~Ie 205 (463)
T KOG0270|consen 129 DEEQVKPSDNLILCARNEDDVSYLEVYVYNEE--EEN-LYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIE 205 (463)
T ss_pred ccceeccCCcEEEEeeccCCceEEEEEEEcCC--Ccc-eeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeE
Confidence 345566766666666432 23 4444432 211 111122 23357777654 223578999999999999
Q ss_pred EEecccCccccc-eeccC--------ccccccccCCCCCceEEEEECCC-CcEEEEEeCCCeEEEEEecCCCCCceeEEe
Q psy9598 590 FWKYKLDIDISK-TVFHE--------PVMFNERIRPGNAHILCSSFSPG-GLFLATGSGDHHVRVYKMDGVDSPLGILEV 659 (1915)
Q Consensus 590 iWDl~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l 659 (1915)
|||+.-...+.. +.+.. .........+|+..|..++|+.. .+.||+||.|.+|++||+. ...+...+
T Consensus 206 IWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~---~g~p~~s~ 282 (463)
T KOG0270|consen 206 IWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVD---TGKPKSSI 282 (463)
T ss_pred EeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcC---CCCcceeh
Confidence 999864332211 11110 00011112357777888888875 4579999999999999994 44556667
Q ss_pred ccCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEE
Q psy9598 660 EEHSDKVDSIQWSHS-HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738 (1915)
Q Consensus 660 ~~h~~~V~sl~fspd-g~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t 738 (1915)
..|...|.++.|+|. ...|++||.||+|.+.|.+..... ...-...+.|-.++|.+.....+.
T Consensus 283 ~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s----------------~~~wk~~g~VEkv~w~~~se~~f~ 346 (463)
T KOG0270|consen 283 THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNS----------------GKEWKFDGEVEKVAWDPHSENSFF 346 (463)
T ss_pred hhcCCceeEEEecCCCceEEEeccccceEEeeeccCcccc----------------CceEEeccceEEEEecCCCceeEE
Confidence 789999999999986 568999999999999998842210 111124567889999999887777
Q ss_pred EEecCCeEEEEECCC-CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcce
Q psy9598 739 AINFNFQIKIWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGAL 817 (1915)
Q Consensus 739 ~s~~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V 817 (1915)
++..||+|+-+|++. ++++.++++|.++|.+|++++....+|+|+|.|+.|++|++.......+.. + .-..+..
T Consensus 347 ~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~-~----~~~~~rl 421 (463)
T KOG0270|consen 347 VSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKE-H----SFKLGRL 421 (463)
T ss_pred EecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccc-c----cccccce
Confidence 776699999999987 599999999999999999999888999999999999999997665511111 0 0112346
Q ss_pred EEEEEcCCC-CEEEEEeCCCeEEEEeCCCCccc
Q psy9598 818 FDGKWSPDG-TTCALTDSYGHLLVYGLGGFKRP 849 (1915)
Q Consensus 818 ~~vafSpdg-~~Lasg~~dG~I~Iwdl~s~~~~ 849 (1915)
.|.++.|+- -+||+|+..+.++|||+.+...+
T Consensus 422 ~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 422 HCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred eecccCCCcceEEEecCccceEEEeecccChhH
Confidence 677777764 46788888889999999887554
No 229
>PF06507 Auxin_resp: Auxin response factor; InterPro: IPR010525 This pattern represents a conserved region of auxin-responsive transcription factors. The plant hormone auxin (indole-3-acetic acid) can regulate the gene expression of several families, including Aux/IAA, GH3 and SAUR families. Two related families of proteins, Aux/IAA proteins (IPR003311 from INTERPRO) and the auxin response factors (ARF), are key regulators of auxin-modulated gene expression []. There are multiple ARF proteins, some of which activate, while others repress transcription. ARF proteins bind to auxin-responsive cis-acting promoter elements (AuxREs) using an N-terminal DNA-binding domain. It is thought that Aux/IAA proteins activate transcription by modifying ARF activity through the C-terminal protein-protein interaction domains (IPR011525 from INTERPRO) found in both Aux/IAA and ARF proteins. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0009725 response to hormone stimulus, 0005634 nucleus
Probab=99.78 E-value=2.1e-19 Score=167.09 Aligned_cols=69 Identities=26% Similarity=0.404 Sum_probs=65.3
Q ss_pred CcCCcEEEEEeCCCCCCCcEEEehHhHHHHHcCCCCCCCeEEEEEcCe-----eEEEEEeecCC-----CCCCCceeeE
Q psy9598 1247 KLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA-----WWWGTIEGKPS-----PTKSPFLGYK 1315 (1915)
Q Consensus 1247 ~~~~~~f~v~y~~~~~~~~f~v~~~~y~~~~~~~~~~g~rf~~~~~~~-----~~~G~i~~~~~-----~~~s~w~~~~ 1315 (1915)
..+|..|+|+|+|+.+.+||||++++|++|++++|++||||+|.||++ +|+|||+|+++ ||+|+||||+
T Consensus 5 a~~~~~F~V~Y~PRa~~sEFVV~~~k~~~al~~~~~~GmRfkM~fE~eds~~~~~~GtI~~v~~~dp~~w~~S~WR~Lq 83 (83)
T PF06507_consen 5 AATGSPFEVFYYPRASPSEFVVPASKYDKALNHPWSVGMRFKMRFETEDSSERRWQGTIVGVSDLDPIRWPGSKWRMLQ 83 (83)
T ss_pred hhcCCeEEEEECCCCCCcceEEEHHHHHHHhcCCCCCCcEEEEEeccCCCccceeeeEEeEeeccCCCCCCCCCcccCc
Confidence 457889999999999999999999999999999999999999999875 88999999988 9999999995
No 230
>KOG4378|consensus
Probab=99.78 E-value=1.5e-17 Score=192.87 Aligned_cols=284 Identities=14% Similarity=0.162 Sum_probs=207.0
Q ss_pred cEEEEECCCCcEEEEEeCCCC--CEEEEEEeCCCCE-EEEEeCCCcEEEEECCCC--ce--EEEeecCCCCeEEEEeccC
Q psy9598 499 LIKLWRARDGKLLATLRGCSG--EISDIAIDNRNIL-LAAGTVDKTIRIWNLQTL--AP--ISVLVGHQGIITGVNFCPL 571 (1915)
Q Consensus 499 ~I~IWd~~tg~~~~~l~gH~~--~I~~Lafspdg~~-LaSgs~DgtIrVWDl~tg--~~--~~~l~~h~~~V~sl~fsp~ 571 (1915)
.|+|||+......-.+..|+. .|.+++|+..+.+ +++.+.|..|++|.-... .. +..+.+. .-+||+....
T Consensus 13 ~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~ 90 (673)
T KOG4378|consen 13 KTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQ 90 (673)
T ss_pred ceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhc
Confidence 799999987665555544432 4899999887742 334456889999975432 11 2222222 2334443332
Q ss_pred ccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCC
Q psy9598 572 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651 (1915)
Q Consensus 572 ~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~ 651 (1915)
..++++|+..++|+|||++...+ ...+..|...|+|+.++....+||+++..|.|.|..+.+
T Consensus 91 ----S~y~~sgG~~~~Vkiwdl~~kl~------------hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t-- 152 (673)
T KOG4378|consen 91 ----SLYEISGGQSGCVKIWDLRAKLI------------HRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKT-- 152 (673)
T ss_pred ----ceeeeccCcCceeeehhhHHHHH------------hhhccCCcceeEEEEecCCcceeEEeccCCcEEEEeccc--
Confidence 27999999999999999985432 223456789999999999999999999999999999843
Q ss_pred CCceeEEeccC-CCCeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEE
Q psy9598 652 SPLGILEVEEH-SDKVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAW 729 (1915)
Q Consensus 652 ~~~~i~~l~~h-~~~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~ 729 (1915)
......+.-. ...|.-+.|++..+ +|.+++.+|.|.+||+...... ......|..+...|||
T Consensus 153 -~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~---------------~~~~~~HsAP~~gicf 216 (673)
T KOG4378|consen 153 -KQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPI---------------FHASEAHSAPCRGICF 216 (673)
T ss_pred -CccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcc---------------cchhhhccCCcCccee
Confidence 2333333333 34566889999876 5667899999999999865522 2234457888899999
Q ss_pred CCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeee
Q psy9598 730 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIV 809 (1915)
Q Consensus 730 spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~ 809 (1915)
+|....|+++.+.|..|.+||+........+. -..+..+|+|++ +|.+|+.|...|.|..||++..+. .+....
T Consensus 217 spsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~-~G~~L~aG~s~G~~i~YD~R~~k~-Pv~v~s--- 290 (673)
T KOG4378|consen 217 SPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSE-CGTYLCAGNSKGELIAYDMRSTKA-PVAVRS--- 290 (673)
T ss_pred cCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecC-CceEEEeecCCceEEEEecccCCC-CceEee---
Confidence 99988877777679999999998777666664 345689999999 999999999999999999987654 144333
Q ss_pred cCCCCcceEEEEEcCCC
Q psy9598 810 EGQGEGALFDGKWSPDG 826 (1915)
Q Consensus 810 ~~~~~~~V~~vafSpdg 826 (1915)
.|...|++++|-|..
T Consensus 291 --ah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 291 --AHDASVTRVAFQPSP 305 (673)
T ss_pred --ecccceeEEEeeecc
Confidence 566789999998765
No 231
>KOG0307|consensus
Probab=99.78 E-value=1.7e-18 Score=220.60 Aligned_cols=286 Identities=18% Similarity=0.346 Sum_probs=214.5
Q ss_pred EEEEcCCCC-EEEEEE----------CCCcEEEEECC--CC----cEEEEEeCCCCCEEEEEEeCCCCE----EEEEeCC
Q psy9598 481 CVLFDKLGE-VIVTGA----------DDLLIKLWRAR--DG----KLLATLRGCSGEISDIAIDNRNIL----LAAGTVD 539 (1915)
Q Consensus 481 ~vafspdg~-~LaTGs----------~Dg~I~IWd~~--tg----~~~~~l~gH~~~I~~Lafspdg~~----LaSgs~D 539 (1915)
.++|+|.+. +||+|. .+.++-||.+. +. +++..+. .....+.|+|.+.|.. ||.|..|
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~ed 89 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLED 89 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccC
Confidence 467888776 555553 34456666543 22 2333332 2446789999987665 8889999
Q ss_pred CcEEEEECCCC------ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccc
Q psy9598 540 KTIRIWNLQTL------APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNER 613 (1915)
Q Consensus 540 gtIrVWDl~tg------~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~ 613 (1915)
|.|.+||.... ..+.+...|.+.|..+.|++.. +++|++|+.||.|.|||+..........
T Consensus 90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q---~nlLASGa~~geI~iWDlnn~~tP~~~~---------- 156 (1049)
T KOG0307|consen 90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQ---GNLLASGADDGEILIWDLNKPETPFTPG---------- 156 (1049)
T ss_pred CceEEecchhhccCcchHHHhhhcccCCceeeeeccccC---CceeeccCCCCcEEEeccCCcCCCCCCC----------
Confidence 99999998652 2456677899999999999964 5799999999999999998753221111
Q ss_pred cCCCCCceEEEEECCC-CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC--CCeeEEEEcCCCC-EEEEEeCCC---c
Q psy9598 614 IRPGNAHILCSSFSPG-GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS--DKVDSIQWSHSHL-RFVSGSRDG---T 686 (1915)
Q Consensus 614 ~~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~--~~V~sl~fspdg~-~L~sgs~DG---~ 686 (1915)
.......|.|++|+.. ...|++|+.+|.+.|||++.. ..+..+..|. ..+..|+|+|++. .|++++.|. .
T Consensus 157 ~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~---~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pv 233 (1049)
T KOG0307|consen 157 SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKK---KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPV 233 (1049)
T ss_pred CCCCcccceEeccchhhhHHhhccCCCCCceeccccCC---CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCce
Confidence 1123478999999985 456888999999999999654 2333343333 4588999999875 566666553 5
Q ss_pred EEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCC-CEEEEEEecCCeEEEEECCCCceEEEeeCCCC
Q psy9598 687 ALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD-RWVITAINFNFQIKIWDAFNGDLVQVLKGHTN 765 (1915)
Q Consensus 687 I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg-~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~ 765 (1915)
|.+||++... .......+|...|.++.|++.+ .+|++++. |+.|.+|+..+|+.+..+....+
T Consensus 234 iqlWDlR~as---------------sP~k~~~~H~~GilslsWc~~D~~lllSsgk-D~~ii~wN~~tgEvl~~~p~~~n 297 (1049)
T KOG0307|consen 234 IQLWDLRFAS---------------SPLKILEGHQRGILSLSWCPQDPRLLLSSGK-DNRIICWNPNTGEVLGELPAQGN 297 (1049)
T ss_pred eEeecccccC---------------CchhhhcccccceeeeccCCCCchhhhcccC-CCCeeEecCCCceEeeecCCCCc
Confidence 9999987543 1122345789999999999988 55666665 99999999999999999999889
Q ss_pred CeEEEEEccCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 766 EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 766 ~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
+++.+.|+|.+..+|++++-||.|-|+.+.++..
T Consensus 298 W~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~~ 331 (1049)
T KOG0307|consen 298 WCFDVQWCPRNPSVMAAASFDGKISIYSLQGTDT 331 (1049)
T ss_pred ceeeeeecCCCcchhhhheeccceeeeeeecCCc
Confidence 9999999998888999999999999999987653
No 232
>KOG4378|consensus
Probab=99.78 E-value=9.8e-18 Score=194.35 Aligned_cols=270 Identities=17% Similarity=0.209 Sum_probs=201.6
Q ss_pred CcEEEEECCCCceEEEeecCC--CCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQ--GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 617 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~--~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1915)
..++|||+........+..|+ ..|.+++|.... .-.+++.+.|..|++|.-..... ... ..... .+
T Consensus 12 d~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n---~lvvas~~gdk~~~~~~K~g~~~--~Vp------~~~k~-~g 79 (673)
T KOG4378|consen 12 DKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRN---FLVVASMAGDKVMRIKEKDGKTP--EVP------RVRKL-TG 79 (673)
T ss_pred CceEEeecccccCccccccCCCCCcceeeeccccc---eEEEeecCCceeEEEecccCCCC--ccc------eeecc-cc
Confidence 469999998665555444443 248899998631 12333445678899996543311 110 01111 11
Q ss_pred CCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCce
Q psy9598 618 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQW 697 (1915)
Q Consensus 618 ~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~ 697 (1915)
..-.|++......++++||..++|+|||+. ...+...+.+|...|++|.+.-...+|++++..|.|.|..+.+++.
T Consensus 80 -d~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~---~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~ 155 (673)
T KOG4378|consen 80 -DNAFCVACASQSLYEISGGQSGCVKIWDLR---AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQK 155 (673)
T ss_pred -chHHHHhhhhcceeeeccCcCceeeehhhH---HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcc
Confidence 234455555556899999999999999994 4456667899999999999999999999999999999998887762
Q ss_pred EEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEe-eCCCCCeEEEEEccCC
Q psy9598 698 RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL-KGHTNEVFVLESHPFD 776 (1915)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l-~gH~~~V~sl~~sp~d 776 (1915)
... ...+....|.-+.|++..++++...+.+|.|.+||+....++..+ ..|..+...|||+|.+
T Consensus 156 tt~---------------f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsn 220 (673)
T KOG4378|consen 156 TTT---------------FTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSN 220 (673)
T ss_pred ccc---------------eecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCc
Confidence 110 111234456789999999988877666999999999877776655 5899999999999988
Q ss_pred CCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc
Q psy9598 777 SRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKR 848 (1915)
Q Consensus 777 g~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~ 848 (1915)
..+|++.|.|..|.+||+.+... ...+. ...+...++|+++|.+|++|...|.|..||+...+.
T Consensus 221 e~l~vsVG~Dkki~~yD~~s~~s--~~~l~------y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~ 284 (673)
T KOG4378|consen 221 EALLVSVGYDKKINIYDIRSQAS--TDRLT------YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKA 284 (673)
T ss_pred cceEEEecccceEEEeecccccc--cceee------ecCCcceeeecCCceEEEeecCCceEEEEecccCCC
Confidence 88999999999999999987665 33332 235789999999999999999999999999987543
No 233
>KOG1963|consensus
Probab=99.78 E-value=4e-16 Score=194.72 Aligned_cols=376 Identities=16% Similarity=0.186 Sum_probs=260.5
Q ss_pred ccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCC---CEEEEEECCCcEEEEECCCCcEEEEEe-------
Q psy9598 446 REYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLG---EVIVTGADDLLIKLWRARDGKLLATLR------- 515 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg---~~LaTGs~Dg~I~IWd~~tg~~~~~l~------- 515 (1915)
+.+-++....+.+.. ..+..+++.|.+|..+++.+.+.|.. .++++++.||.|++||...+.++.++.
T Consensus 29 k~l~~~~~~~V~VyS--~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~ 106 (792)
T KOG1963|consen 29 KFLFLCTGNFVKVYS--TATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHA 106 (792)
T ss_pred cEEEEeeCCEEEEEe--cchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeE
Confidence 333344444444432 22334455889999999999998754 578899999999999966543322110
Q ss_pred --------------------------------------------------------------------------------
Q psy9598 516 -------------------------------------------------------------------------------- 515 (1915)
Q Consensus 516 -------------------------------------------------------------------------------- 515 (1915)
T Consensus 107 ~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~ 186 (792)
T KOG1963|consen 107 LVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIY 186 (792)
T ss_pred EEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEEEE
Confidence
Q ss_pred ----------------CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC--C--ceEEEeecCCCCeEEEEeccCccCC
Q psy9598 516 ----------------GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--L--APISVLVGHQGIITGVNFCPLEVNG 575 (1915)
Q Consensus 516 ----------------gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t--g--~~~~~l~~h~~~V~sl~fsp~~~~d 575 (1915)
.|.-.++|.+++|+++++|+|..||.|.||.--. + .....+.-|...|++++|++ +
T Consensus 187 ~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~----~ 262 (792)
T KOG1963|consen 187 FVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSS----D 262 (792)
T ss_pred EecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEec----C
Confidence 1333578899999999999999999999996432 1 23456677999999999999 4
Q ss_pred CcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCce
Q psy9598 576 FNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLG 655 (1915)
Q Consensus 576 ~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~ 655 (1915)
|.+|++|+..|.+.+|.+.++...... .-.+.|..+.+|||+.+.+....|..|.+...........
T Consensus 263 G~~LlSGG~E~VLv~Wq~~T~~kqfLP-------------RLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~t 329 (792)
T KOG1963|consen 263 GAYLLSGGREGVLVLWQLETGKKQFLP-------------RLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKST 329 (792)
T ss_pred CceEeecccceEEEEEeecCCCccccc-------------ccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhh
Confidence 599999999999999999988521111 1237899999999999999999999999998743332222
Q ss_pred eEEecc--------CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEE
Q psy9598 656 ILEVEE--------HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV 727 (1915)
Q Consensus 656 i~~l~~--------h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 727 (1915)
+..+.. ..+-.+.++++|.-+.++-.+..|.|.+||+.+...+....-.... .......+...++.+
T Consensus 330 Isgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n-----~~~~~~n~~v~itav 404 (792)
T KOG1963|consen 330 ISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDEN-----YSDGDVNIQVGITAV 404 (792)
T ss_pred ccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeec-----ccCCcceeEEeeeee
Confidence 222211 2455778889997778888999999999999887755322111110 111112455678889
Q ss_pred EECCCCCEEEEEEe-------cC--CeEEEEECCCCc----eEEEe-eCCCCCeEEEEEccCCCC-EEEEEecCceEEEE
Q psy9598 728 AWDASDRWVITAIN-------FN--FQIKIWDAFNGD----LVQVL-KGHTNEVFVLESHPFDSR-VLLSAGHDGLIIIW 792 (1915)
Q Consensus 728 a~spdg~~L~t~s~-------~D--g~I~vwD~~tg~----~i~~l-~gH~~~V~sl~~sp~dg~-~LaSgs~DG~I~IW 792 (1915)
+.+..|.++++.-. .| ..+++|-..... +...+ ..|...+.+.++.+.... .++|+|.||.++||
T Consensus 405 ~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW 484 (792)
T KOG1963|consen 405 ARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIW 484 (792)
T ss_pred hhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEE
Confidence 99999999888642 13 357888765432 22222 378777666666553433 89999999999999
Q ss_pred ECCCCcc---ccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9598 793 DILSSKQ---RGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 793 dl~s~~~---~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
-+...+. ....+....+...+..++.+++|+.||..||++.. +.|.|||..+.
T Consensus 485 ~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~-~~Itiwd~~~~ 540 (792)
T KOG1963|consen 485 VFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFD-DTITIWDYDTK 540 (792)
T ss_pred EEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecC-CEEEEecCCCh
Confidence 9844322 11122222333456788999999999977776655 79999999983
No 234
>KOG0650|consensus
Probab=99.77 E-value=1.9e-17 Score=196.26 Aligned_cols=279 Identities=20% Similarity=0.265 Sum_probs=207.7
Q ss_pred EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEE
Q psy9598 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~ 589 (1915)
+...+.||++.|.||...|.|.+||+|+.||+|+||.+.||.|+.++. ..+.|.||+|+|.. +...|+++-. ..+.
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~--~~~vLAvA~~-~~~~ 467 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLS--DLCVLAVAVG-ECVL 467 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCC--CceeEEEEec-CceE
Confidence 344678999999999999999999999999999999999999999886 45689999999965 3444444444 4466
Q ss_pred EEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEE----eCCCeEEEEEecCCCC-CceeEEeccCCC
Q psy9598 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG----SGDHHVRVYKMDGVDS-PLGILEVEEHSD 664 (1915)
Q Consensus 590 iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasg----s~Dg~I~IwDl~~~~~-~~~i~~l~~h~~ 664 (1915)
|.+..-|..+.... ....|+++ ..++.+..|.-..... ...+...-.|..
T Consensus 468 ivnp~~G~~~e~~~-------------------------t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k 522 (733)
T KOG0650|consen 468 IVNPIFGDRLEVGP-------------------------TKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPK 522 (733)
T ss_pred EeCccccchhhhcc-------------------------hhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCC
Confidence 65544332111100 00111111 2345677786531111 112344456899
Q ss_pred CeeEEEEcCCCCEEEEEeCCC---cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe
Q psy9598 665 KVDSIQWSHSHLRFVSGSRDG---TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 741 (1915)
Q Consensus 665 ~V~sl~fspdg~~L~sgs~DG---~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~ 741 (1915)
.|..|.|+..|.+|++...++ .|.|.++..... ...+....+.|.++.|+|...+|++++.
T Consensus 523 ~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~s----------------Q~PF~kskG~vq~v~FHPs~p~lfVaTq 586 (733)
T KOG0650|consen 523 SIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKS----------------QSPFRKSKGLVQRVKFHPSKPYLFVATQ 586 (733)
T ss_pred ccceeeeecCCceEEEeccCCCcceEEEEecccccc----------------cCchhhcCCceeEEEecCCCceEEEEec
Confidence 999999999999999887653 577777664431 1122335678999999999999999885
Q ss_pred cCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEE
Q psy9598 742 FNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGK 821 (1915)
Q Consensus 742 ~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~va 821 (1915)
..|+|||+..+.++..+......|.++++|| .|.-|+.|+.|+.++.+|+.-+... .+.+. .|..+|.+|+
T Consensus 587 --~~vRiYdL~kqelvKkL~tg~kwiS~msihp-~GDnli~gs~d~k~~WfDldlsskP-yk~lr-----~H~~avr~Va 657 (733)
T KOG0650|consen 587 --RSVRIYDLSKQELVKKLLTGSKWISSMSIHP-NGDNLILGSYDKKMCWFDLDLSSKP-YKTLR-----LHEKAVRSVA 657 (733)
T ss_pred --cceEEEehhHHHHHHHHhcCCeeeeeeeecC-CCCeEEEecCCCeeEEEEcccCcch-hHHhh-----hhhhhhhhhh
Confidence 7899999999888888888888999999999 8899999999999999999765331 33333 5678999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEe
Q psy9598 822 WSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 822 fSpdg~~Lasg~~dG~I~Iwd 842 (1915)
|++.-.+||+|+.||.+.||.
T Consensus 658 ~H~ryPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 658 FHKRYPLFASGSDDGTVIVFH 678 (733)
T ss_pred hccccceeeeecCCCcEEEEe
Confidence 999999999999999999986
No 235
>KOG1472|consensus
Probab=99.76 E-value=8.7e-19 Score=219.42 Aligned_cols=104 Identities=34% Similarity=0.538 Sum_probs=98.1
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCC
Q psy9598 1532 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611 (1915)
Q Consensus 1532 ~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~ 1611 (1915)
.+......+|..|.+|.++|||.+||+..++||||++|++||||.||+.+|..++|.....|..|+.+||+||+.||...
T Consensus 606 ~~~s~~~~il~~l~~h~~awPf~~Pv~~~e~pdyy~~I~~pmDl~tM~~~l~~~~y~~~~~f~ad~~~vf~ncr~yn~~~ 685 (720)
T KOG1472|consen 606 KLFSAIQNILDQLQNHGDAWPFLKPVNKKEVPDYYDVIKHPMDLRTMQNRLKDNQYTEVELFMADVVRVFANCRMYNGSD 685 (720)
T ss_pred hhhHHHHhHHhhhhcCCccCCccCccccccCCcHHHHhcccccHHHHhhhccccchhhHHHHHHHHHHHHhhhhccCCcc
Confidence 44566888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1612 RSKIYIMTTRLSEFAEEHLRRLTVR 1636 (1915)
Q Consensus 1612 ~s~i~~~a~~l~~~f~~~~~~~~~~ 1636 (1915)
+..|+.|..|..+|..++...+..
T Consensus 686 -~~y~k~~~~le~~~~~k~~~~i~~ 709 (720)
T KOG1472|consen 686 -TQYYKCAQALEKFFLFKLNELILR 709 (720)
T ss_pred -chheecccchhhhhcchhhhhhhh
Confidence 999999999999999999887653
No 236
>KOG1034|consensus
Probab=99.76 E-value=2e-17 Score=184.57 Aligned_cols=260 Identities=17% Similarity=0.270 Sum_probs=197.0
Q ss_pred CCCCcEEEEEEcCC----CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECC
Q psy9598 474 GHLSAVFCVLFDKL----GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN-ILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 474 gH~~~V~~vafspd----g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg-~~LaSgs~DgtIrVWDl~ 548 (1915)
.|....+.++|+-+ ..+||+||.-|.|+|.|+.++++...+.||...|+.|.|.|+. ++|++||.|.+||+|+++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 58899999999753 4689999999999999999999999999999999999999975 799999999999999999
Q ss_pred CCceEEEee---cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcccccee-------------ccCcc-cc-
Q psy9598 549 TLAPISVLV---GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV-------------FHEPV-MF- 610 (1915)
Q Consensus 549 tg~~~~~l~---~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~-------------~~~~~-~~- 610 (1915)
+..++..+- ||.+.|.++.|+++ +.+|++++.|.+|++|++........+. +..+. .+
T Consensus 167 ~~~Cv~VfGG~egHrdeVLSvD~~~~----gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp 242 (385)
T KOG1034|consen 167 TDVCVAVFGGVEGHRDEVLSVDFSLD----GDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFP 242 (385)
T ss_pred CCeEEEEecccccccCcEEEEEEcCC----CCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccc
Confidence 999999875 69999999999984 5899999999999999998543211111 11000 00
Q ss_pred -ccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCC-----------CCceeEEeccCCCCeeEEE--EcCCCC
Q psy9598 611 -NERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD-----------SPLGILEVEEHSDKVDSIQ--WSHSHL 676 (1915)
Q Consensus 611 -~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~-----------~~~~i~~l~~h~~~V~sl~--fspdg~ 676 (1915)
.....-|..+|-|+.|- |.++++-+.++.|..|...... ....+..+.-....|+-|. |.+-+.
T Consensus 243 ~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~ 320 (385)
T KOG1034|consen 243 DFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQK 320 (385)
T ss_pred cccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHH
Confidence 11233566777777775 4689999999999999872111 1111222333344555554 456688
Q ss_pred EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 677 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 677 ~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
.||.|...|.|.+||+...... .............|...+|+.||.+|+..+. |++|.-||..
T Consensus 321 ~la~gnq~g~v~vwdL~~~ep~------------~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcd-d~~Vwrwdrv 383 (385)
T KOG1034|consen 321 MLALGNQSGKVYVWDLDNNEPP------------KCTTLTHSKSGSTVRQTSFSRDGSILVLVCD-DGTVWRWDRV 383 (385)
T ss_pred HHhhccCCCcEEEEECCCCCCc------------cCceEEeccccceeeeeeecccCcEEEEEeC-CCcEEEEEee
Confidence 9999999999999999876521 1111122334567889999999999999998 9999999853
No 237
>cd05522 Bromo_Rsc1_2_II Bromodomain, repeat II in Rsc1/2_like subfamily, specific to fungi. Rsc1 and Rsc2 are components of the RSC complex (remodeling the structure of chromatin), are essential for transcriptional control, and have a specific domain architecture including two bromodomains. The RSC complex has also been linked to homologous recombination and nonhomologous end-joining repair of DNA double strand breaks. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.76 E-value=9.4e-19 Score=174.36 Aligned_cols=94 Identities=26% Similarity=0.381 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHcC------CCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhc
Q psy9598 1535 NECREVLETLWVC------PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~------~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN 1608 (1915)
.++..|+..|++. +.+.||..+|++..+|+||++|++||||+||++||..+.|.++++|..||+|||.||+.||
T Consensus 4 ~~~~~i~~~v~~~~d~~g~~l~~~F~~~p~~~~~pdYy~~I~~Pmdl~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~yn 83 (104)
T cd05522 4 ARIKNILKGLRKERDENGRLLTLHFEKLPDKAREPEYYQEISNPISLDDIKKKVKRRKYKSFDQFLNDLNLMFENAKLYN 83 (104)
T ss_pred HHHHHHHHHHHHHhCcCCCcccHHHhcCCCccccCcHHHHhCCCcCHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 4566777777764 4488999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q psy9598 1609 QNKRSKIYIMTTRLSEFAEEH 1629 (1915)
Q Consensus 1609 ~~~~s~i~~~a~~l~~~f~~~ 1629 (1915)
+++ |.+|.+|..|++.|+.+
T Consensus 84 ~~~-s~i~~~A~~l~~~f~~l 103 (104)
T cd05522 84 END-SQEYKDAVLLEKEARLL 103 (104)
T ss_pred CCC-CHHHHHHHHHHHHHHHh
Confidence 988 99999999999999874
No 238
>smart00297 BROMO bromo domain.
Probab=99.76 E-value=1.6e-18 Score=176.15 Aligned_cols=101 Identities=38% Similarity=0.600 Sum_probs=96.1
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCC
Q psy9598 1531 FNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQN 1610 (1915)
Q Consensus 1531 ~~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~ 1610 (1915)
..+...|..|++.+.+++.+++|..||++..+|+||++|++||||++|++||++|.|.|+.+|..||++||.||+.||++
T Consensus 6 ~~~~~~~~~i~~~~~~~~~~~~F~~~~~~~~~p~Y~~~i~~P~dl~~I~~kl~~~~Y~s~~ef~~D~~li~~Na~~~n~~ 85 (107)
T smart00297 6 KKLQSLLKAVLDKLDSHRLSWPFLKPVDRKEAPDYYDIIKKPMDLSTIKKKLENGKYSSVEEFVADVQLMFSNAKTYNGP 85 (107)
T ss_pred HHHHHHHHHHHHHHHhCccchhhccCCChhhccCHHHHhcCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCC
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q psy9598 1611 KRSKIYIMTTRLSEFAEEHLRR 1632 (1915)
Q Consensus 1611 ~~s~i~~~a~~l~~~f~~~~~~ 1632 (1915)
+ |.+|.+|..|.+.|+++|++
T Consensus 86 ~-s~~~~~a~~l~~~f~~~~~~ 106 (107)
T smart00297 86 D-SEVYKDAKKLEKFFEKKLRE 106 (107)
T ss_pred C-CHHHHHHHHHHHHHHHHHhh
Confidence 7 99999999999999999875
No 239
>KOG1188|consensus
Probab=99.75 E-value=2.2e-17 Score=185.54 Aligned_cols=288 Identities=16% Similarity=0.224 Sum_probs=200.7
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeC--CCCEEEEEeCCCcEEEEECCCCceEEEe--ecCC-CCe
Q psy9598 489 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN--RNILLAAGTVDKTIRIWNLQTLAPISVL--VGHQ-GII 563 (1915)
Q Consensus 489 ~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafsp--dg~~LaSgs~DgtIrVWDl~tg~~~~~l--~~h~-~~V 563 (1915)
..+|++...|.|+|||..+|+.+..|++|...++.+.|.. ....+.+|+.||+|++||+++......+ ..|. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5789999999999999999999999999999999999977 4678999999999999999886655443 4455 345
Q ss_pred EEEEeccCccCCCcEEEEEe----CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEEEEEeC
Q psy9598 564 TGVNFCPLEVNGFNYLASTS----TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFLATGSG 638 (1915)
Q Consensus 564 ~sl~fsp~~~~d~~~L~sgs----~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~Lasgs~ 638 (1915)
.|++..- ..+.+++|+ .+..|.+||++..+.... .....|...|+++.|+|. .++|++|+.
T Consensus 121 ~~ld~nc----k~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~----------~~~eSH~DDVT~lrFHP~~pnlLlSGSv 186 (376)
T KOG1188|consen 121 ICLDLNC----KKNIIACGTELTRSDASVVLWDVRSEQQLLR----------QLNESHNDDVTQLRFHPSDPNLLLSGSV 186 (376)
T ss_pred eEeeccC----cCCeEEeccccccCceEEEEEEeccccchhh----------hhhhhccCcceeEEecCCCCCeEEeecc
Confidence 5665543 346777765 477899999998764211 122367899999999995 579999999
Q ss_pred CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 639 Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
||.|.|||+.....-..+...-.|...|.++.|..++ ..|.+-+..++..+|++..+............ .......
T Consensus 187 DGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~---~~d~r~~ 263 (376)
T KOG1188|consen 187 DGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVS---ADDLRKE 263 (376)
T ss_pred cceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccch---hhhHHhh
Confidence 9999999996554444455555678889999999876 46889999999999999877632211100000 0000011
Q ss_pred ccccccEEEEEECCCCCEEEEEEecCCeEEEEEC---CC---CceEEEeeC-CCCCeEEEEEccCCCCEEEEEecCceEE
Q psy9598 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA---FN---GDLVQVLKG-HTNEVFVLESHPFDSRVLLSAGHDGLII 790 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~---~t---g~~i~~l~g-H~~~V~sl~~sp~dg~~LaSgs~DG~I~ 790 (1915)
.....-|.+.+ ..+..+++++++.-+...++-+ .+ ++.+..+.| |...|.++.|.. .+.++.|||.||.|.
T Consensus 264 ~~~dY~I~~~~-~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~-~~~~l~TGGEDG~l~ 341 (376)
T KOG1188|consen 264 DNCDYVINEHS-PGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDV-KNDVLYTGGEDGLLQ 341 (376)
T ss_pred hhhhheeeccc-CCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhc-ccceeeccCCCceEE
Confidence 11112222222 2233333333331344444432 22 445666776 667788888876 889999999999999
Q ss_pred EEECC
Q psy9598 791 IWDIL 795 (1915)
Q Consensus 791 IWdl~ 795 (1915)
+|...
T Consensus 342 ~Wk~~ 346 (376)
T KOG1188|consen 342 AWKVE 346 (376)
T ss_pred EEecC
Confidence 99863
No 240
>KOG1009|consensus
Probab=99.75 E-value=7e-17 Score=185.11 Aligned_cols=305 Identities=20% Similarity=0.239 Sum_probs=209.6
Q ss_pred ccccccCCCeEEEecccC-------CceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC--------C---
Q psy9598 446 REYSGPLSRSLMISSHKY-------SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR--------D--- 507 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~-------~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~--------t--- 507 (1915)
+..+|+.|..+++|.... ..+..+..|.+|..+|++|-|+|+|.+||+|+++|.|.+|-.. +
T Consensus 28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~ 107 (434)
T KOG1009|consen 28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEAD 107 (434)
T ss_pred ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhh
Confidence 778999999999995321 2567778899999999999999999999999999999999765 2
Q ss_pred -----CcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEE
Q psy9598 508 -----GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582 (1915)
Q Consensus 508 -----g~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg 582 (1915)
......+.+|...|..++|++++.++++|+.|.++++||+..|.....+..|...|..++|.|.. +++++-
T Consensus 108 ~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~----qyv~s~ 183 (434)
T KOG1009|consen 108 LNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLN----QYVASK 183 (434)
T ss_pred hCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhh----hhhhhh
Confidence 23456788999999999999999999999999999999999999999999999999999999965 899999
Q ss_pred eCCCeEEEEecccCccccceecc---------Ccccccccc--CCCCCceEEEEECCCCcEEEEEeC----CCeE-----
Q psy9598 583 STDGCIGFWKYKLDIDISKTVFH---------EPVMFNERI--RPGNAHILCSSFSPGGLFLATGSG----DHHV----- 642 (1915)
Q Consensus 583 s~DgtI~iWDl~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~V~~l~fspdg~~Lasgs~----Dg~I----- 642 (1915)
+.|...+.+.+.....+...... .......-+ .........++|+|+|.+|++... .+.+
T Consensus 184 s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~t 263 (434)
T KOG1009|consen 184 SSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTS 263 (434)
T ss_pred ccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeecee
Confidence 98887777766554332222110 000000000 011233456799999999988654 1111
Q ss_pred EEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccc
Q psy9598 643 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKI 722 (1915)
Q Consensus 643 ~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1915)
++|+- ......+..+.+...++..+.|+|- .|.++... ...
T Consensus 264 Yvfsr--k~l~rP~~~lp~~~k~~lavr~~pV--------------y~elrp~~----------------------~~~- 304 (434)
T KOG1009|consen 264 YVFSR--KDLKRPAARLPSPKKPALAVRFSPV--------------YYELRPLS----------------------SEK- 304 (434)
T ss_pred Eeecc--ccccCceeecCCCCcceEEEEeeee--------------EEEecccc----------------------ccc-
Confidence 22221 1111122222333333333333321 12111100 000
Q ss_pred cEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-CCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 723 KVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 723 ~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
. +---|-+-.+++++ ...|+|||..+..++..+. -|-..|+.++|++ +|.+|+..+.||.+.+--+...+.
T Consensus 305 -~--~~~lpyrlvfaiAt--~~svyvydtq~~~P~~~v~nihy~~iTDiaws~-dg~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 305 -F--LFVLPYRLVFAIAT--KNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSD-DGSVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred -c--ccccccceEEEEee--cceEEEeccccccceEEEeeeeeeeecceeecC-CCcEEEEeccCCceEEEEEcchhc
Confidence 0 11112333344444 5789999999888777665 6888999999999 999999999999988877766555
No 241
>PF00439 Bromodomain: Bromodomain; InterPro: IPR001487 Bromodomains are found in a variety of mammalian, invertebrate and yeast DNA-binding proteins []. Bromodomains can interact with acetylated lysine []. In some proteins, the classical bromodomain has diverged to such an extent that parts of the region are either missing or contain an insertion (e.g., mammalian protein HRX, Caenorhabditis elegans hypothetical protein ZK783.4, yeast protein YTA7). The bromodomain may occur as a single copy, or in duplicate. The precise function of the domain is unclear, but it may be involved in protein-protein interactions and may play a role in assembly or activity of multi-component complexes involved in transcriptional activation [].; GO: 0005515 protein binding; PDB: 3P1C_A 4A9K_B 3SVH_A 3P1E_B 3P1F_A 1JSP_B 2L85_A 3P1D_B 3DWY_B 2D82_A ....
Probab=99.74 E-value=2.1e-18 Score=166.95 Aligned_cols=84 Identities=46% Similarity=0.790 Sum_probs=79.8
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCHHH
Q psy9598 122 CREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 201 (1915)
Q Consensus 122 ~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s~i~ 201 (1915)
|..||+.|++++.+++|..||+...+|+|+++|++||||+||++||++|.|.++.+|..||+|||.||+.||+++ |.+|
T Consensus 1 C~~il~~l~~~~~~~~F~~~~~~~~~p~y~~~i~~P~dL~~I~~kl~~~~Y~s~~~f~~Dv~~i~~Na~~yn~~~-s~~~ 79 (84)
T PF00439_consen 1 CREILEELMKHPISSPFSKPVDPKEYPDYYEIIKNPMDLSTIRKKLENGKYKSIEEFEADVRLIFQNARRYNPPD-SPIY 79 (84)
T ss_dssp HHHHHHHHHTSTTGGGGSSSTHTTTSTTHHHHSSSS--HHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHSCTT-SHHH
T ss_pred CHHHHHHHHcCCCchhhcCCCChhhCCCHHHHHhhccchhhhhHHhhccchhhHHHHHHHHHHHHHHHHHHCCCc-CHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999966 9999
Q ss_pred HHHHH
Q psy9598 202 IMTTR 206 (1915)
Q Consensus 202 ~~a~~ 206 (1915)
.+|.+
T Consensus 80 ~~A~~ 84 (84)
T PF00439_consen 80 KAAEK 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99974
No 242
>KOG0008|consensus
Probab=99.74 E-value=5e-18 Score=216.99 Aligned_cols=215 Identities=23% Similarity=0.370 Sum_probs=172.9
Q ss_pred HHHHhcCCCccCCCCCCCCCCCCCccccccCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhhhhcCCCCHHHHHHH
Q psy9598 1381 GLEEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYAR 1460 (1915)
Q Consensus 1381 ~~~~~~~~~~~~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na~~yN~~~s~i~~~a~ 1460 (1915)
.++++...+...+|..||+....++||.||..||||.++++.+..+.|...+.|+.|+.||+.|..+||+|.+.....|+
T Consensus 1269 i~n~~~~~~~t~~f~~Pv~~k~v~dyy~vi~~P~~lq~~kk~v~kr~y~~r~~fle~~~~~~~ns~~yng~~~~~t~~~q 1348 (1563)
T KOG0008|consen 1269 IINQARSSPNTYPFPTPVNAKEVKDYYRVITPPMDLQTQKKLVRKRLYESREHFLEELPLIVSNSTKYNGPLASLTRQQQ 1348 (1563)
T ss_pred HHHHHhcCCCCcCCCCccchhhccchhhccCCCcchHHHHHHHHHHHHHHHHHHHHHhHHHhhchhhhcCchHHHHHHHH
Confidence 45667778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCccchhhhhcccccCCCChhhhhhhhhhhccccCCcchhhhhHHHhhhhhcCCchhhHHHHHHH
Q psy9598 1461 IITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSEEEEEEDSKSRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNECREV 1540 (1915)
Q Consensus 1461 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1540 (1915)
.+...+-..+..-. ..+ .+........-.......+ -..-.+
T Consensus 1349 ~mls~~~~~~~eke--------dk~-----------------------------~~lEk~Inplld~~d~v~~-~~~d~~ 1390 (1563)
T KOG0008|consen 1349 SMLSLCFEKLKEKE--------DKL-----------------------------WRLEKAINPLLDDDDQVAF-FILDNI 1390 (1563)
T ss_pred HHHHHHHHhhchhH--------HHH-----------------------------HHHHhhcCcccCccchhhH-hhhhhH
Confidence 88877755554300 000 0000000000000011112 335567
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH
Q psy9598 1541 LETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTT 1620 (1915)
Q Consensus 1541 l~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~i~~~a~ 1620 (1915)
+..+++.+.+|||++||+++..|+||.+|++||||.||.+++..+.|.+..+|.+||++|+.||..||+.. +.+..-|.
T Consensus 1391 vs~~~~ipes~~f~~~v~~k~~~~yy~kik~pmdl~~i~~n~~~~~y~s~~e~l~dv~~i~~n~~~~ng~e-~~y~~k~~ 1469 (1563)
T KOG0008|consen 1391 VSQMKEIPESWPFHEPVNKKRVPDYYKKIKNPMDLETILKNIPPHKYDSRSEFLDDVNLIYVNSVEYNGAE-SAYTKKAR 1469 (1563)
T ss_pred HHHHHhcchhcccccccchhhchHHHHHhcChhhHHHHhhcCCccccccHHHHhhhhHhhcccceeecCcc-ccccHHHH
Confidence 77788889999999999999999999999999999999999999999999999999999999999999987 88877787
Q ss_pred HHHHHHHHHHHHHH
Q psy9598 1621 RLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1621 ~l~~~f~~~~~~~~ 1634 (1915)
.+-.+....+.+..
T Consensus 1470 k~~ev~~~~~~e~~ 1483 (1563)
T KOG0008|consen 1470 KIGEVGLANLLEYI 1483 (1563)
T ss_pred HHHHHHHHHHHHHH
Confidence 77776666555444
No 243
>KOG0642|consensus
Probab=99.74 E-value=1.5e-17 Score=197.49 Aligned_cols=265 Identities=17% Similarity=0.253 Sum_probs=197.6
Q ss_pred ceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC--------CcEEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy9598 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD--------GKLLATLRGCSGEISDIAIDNRNILLAAG 536 (1915)
Q Consensus 465 ~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t--------g~~~~~l~gH~~~I~~Lafspdg~~LaSg 536 (1915)
++....++..|.+.|.+++|.+....|++|+.||+|++|++.. -+++.+|++|.++|.|+++.+++..+++|
T Consensus 283 ~w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysg 362 (577)
T KOG0642|consen 283 KWNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSG 362 (577)
T ss_pred ecceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEee
Confidence 3455568999999999999999999999999999999999932 25789999999999999999999999999
Q ss_pred eCCCcEEEEECCC----------CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccC
Q psy9598 537 TVDKTIRIWNLQT----------LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606 (1915)
Q Consensus 537 s~DgtIrVWDl~t----------g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~ 606 (1915)
+.||+|+.|++.. .....++.||++.|+.+++++.. ..|++++.||+|++|+...... ..+..
T Consensus 363 g~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~----~~Llscs~DgTvr~w~~~~~~~---~~f~~ 435 (577)
T KOG0642|consen 363 GIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTK----DRLLSCSSDGTVRLWEPTEESP---CTFGE 435 (577)
T ss_pred ccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccc----cceeeecCCceEEeeccCCcCc---cccCC
Confidence 9999999996641 12356788999999999999855 7799999999999998766543 12221
Q ss_pred ccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEecc-------CCCCeeEEEEcCCCCEE
Q psy9598 607 PVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEE-------HSDKVDSIQWSHSHLRF 678 (1915)
Q Consensus 607 ~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~-------h~~~V~sl~fspdg~~L 678 (1915)
+. ..+...++.|.... .++++ +..+..+++........+..+.. ....+.-|.++|.+.+.
T Consensus 436 ~~--------e~g~Plsvd~~ss~~a~~~~---s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~ 504 (577)
T KOG0642|consen 436 PK--------EHGYPLSVDRTSSRPAHSLA---SFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADIT 504 (577)
T ss_pred cc--------ccCCcceEeeccchhHhhhh---hcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCee
Confidence 11 11333445544332 12222 22333333322222222222211 12346778899999999
Q ss_pred EEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEE
Q psy9598 679 VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758 (1915)
Q Consensus 679 ~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~ 758 (1915)
+++..|+.|+++|..++..+. ....|...++++++.|+|.+|++++. |+.+++|.+....++.
T Consensus 505 ~~~hed~~Ir~~dn~~~~~l~----------------s~~a~~~svtslai~~ng~~l~s~s~-d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 505 FTAHEDRSIRFFDNKTGKILH----------------SMVAHKDSVTSLAIDPNGPYLMSGSH-DGSVRLWKLDVKTCVL 567 (577)
T ss_pred EecccCCceecccccccccch----------------heeeccceecceeecCCCceEEeecC-Cceeehhhccchheee
Confidence 999999999999998876332 23447788999999999999999999 9999999998877777
Q ss_pred EeeCCC
Q psy9598 759 VLKGHT 764 (1915)
Q Consensus 759 ~l~gH~ 764 (1915)
....|.
T Consensus 568 es~~~r 573 (577)
T KOG0642|consen 568 ESTAHR 573 (577)
T ss_pred cccccc
Confidence 766664
No 244
>KOG2919|consensus
Probab=99.74 E-value=1.7e-16 Score=176.45 Aligned_cols=282 Identities=15% Similarity=0.151 Sum_probs=202.4
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCC-----C--ce-----EEEee-cCCCCeEEEEeccCc---cCCCcEEEEEeC
Q psy9598 521 ISDIAIDNRNILLAAGTVDKTIRIWNLQT-----L--AP-----ISVLV-GHQGIITGVNFCPLE---VNGFNYLASTST 584 (1915)
Q Consensus 521 I~~Lafspdg~~LaSgs~DgtIrVWDl~t-----g--~~-----~~~l~-~h~~~V~sl~fsp~~---~~d~~~L~sgs~ 584 (1915)
...+.|+|||..|++-+.|..+++|++.. + .. ..++. .....|...+|-+.- ..+..++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 34578999999999999999999999842 1 11 11111 133567777776311 124589999999
Q ss_pred CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEec----
Q psy9598 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE---- 660 (1915)
Q Consensus 585 DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~---- 660 (1915)
+.-|++||.-++..-.....-.. . ..-....|++|+|||..|++|. ...|+|||+........+....
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh--~-----de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k 203 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDH--Q-----DEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGK 203 (406)
T ss_pred cCceeeeeccccccccchhhhhh--H-----HhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhccc
Confidence 99999999999875433322100 0 0113356899999999999875 5799999995433333333222
Q ss_pred -cCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEE
Q psy9598 661 -EHSDKVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738 (1915)
Q Consensus 661 -~h~~~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t 738 (1915)
+..+-|.+++|+|... .+++|+....+-||.-..+.. .....+|.+.|+.++|.++|..|++
T Consensus 204 ~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~p----------------l~llggh~gGvThL~~~edGn~lfs 267 (406)
T KOG2919|consen 204 FGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRP----------------LQLLGGHGGGVTHLQWCEDGNKLFS 267 (406)
T ss_pred ccccceeeeeeccCCCCcceeeecccceeeeEecCCCCc----------------eeeecccCCCeeeEEeccCcCeecc
Confidence 3367899999999765 889999888888875544432 2234478999999999999999999
Q ss_pred EEecCCeEEEEECCC-CceEEEeeCCCC-CeEEE--EEccCCCCEEEEEecCceEEEEECCC-CccccceeeeeeecCCC
Q psy9598 739 AINFNFQIKIWDAFN-GDLVQVLKGHTN-EVFVL--ESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVEGQG 813 (1915)
Q Consensus 739 ~s~~Dg~I~vwD~~t-g~~i~~l~gH~~-~V~sl--~~sp~dg~~LaSgs~DG~I~IWdl~s-~~~~~~~~~~~~~~~~~ 813 (1915)
|...+-.|-+||++. ..++..|..|.+ .-..| ...| ++++|++|+.||.|++||+.. +.. ...+ +.+
T Consensus 268 GaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~-~~~~LasG~tdG~V~vwdlk~~gn~--~sv~-----~~~ 339 (406)
T KOG2919|consen 268 GARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDP-KGEILASGDTDGSVRVWDLKDLGNE--VSVT-----GNY 339 (406)
T ss_pred cccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCC-CCceeeccCCCccEEEEecCCCCCc--cccc-----ccc
Confidence 998899999999985 567778887765 22233 3456 889999999999999999987 443 2222 245
Q ss_pred CcceEEEEEcCCCCEEEEEeC
Q psy9598 814 EGALFDGKWSPDGTTCALTDS 834 (1915)
Q Consensus 814 ~~~V~~vafSpdg~~Lasg~~ 834 (1915)
...|..++++|--.++|+++.
T Consensus 340 sd~vNgvslnP~mpilatssG 360 (406)
T KOG2919|consen 340 SDTVNGVSLNPIMPILATSSG 360 (406)
T ss_pred cccccceecCcccceeeeccC
Confidence 567889999999777777765
No 245
>cd05492 Bromo_ZMYND11 Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene expression. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.74 E-value=6.5e-18 Score=167.30 Aligned_cols=97 Identities=20% Similarity=0.288 Sum_probs=86.1
Q ss_pred HHHHHHHHhc-CCCCCCCCCCCC-----CCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q psy9598 122 CREVLETLWV-CPDSEPFRKPVD-----KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQN 195 (1915)
Q Consensus 122 ~~~il~~l~~-~~~~~~F~~pvd-----~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~ 195 (1915)
+..++..+.. -+.+.||..||. ..++|+||++|++||||+||++||++|.|+++++|..||+|||.||+.||++
T Consensus 5 L~f~~~~~k~~lp~~~~~~~~v~~~~~~~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~Dv~LI~~N~~~yNg~ 84 (109)
T cd05492 5 LKFIVSRMKSWLPPDTTNRAIVLNKRGKATKLPKRRRLIHTHLDVADIQEKINSEKYTSLEEFKADALLLLHNTAIFHGA 84 (109)
T ss_pred HHHHHHHHHhcCcccccccccccccCchhccCCCHHHHhCCCCcHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHCCC
Confidence 3455666666 566899999995 4469999999999999999999999999999999999999999999999997
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 196 KRSKIYIMTTRLSEFAEEHLRRLT 219 (1915)
Q Consensus 196 ~~s~i~~~a~~l~~~f~~~~~~~~ 219 (1915)
+ |.+|.+|..|-+....-+.+|.
T Consensus 85 ~-s~~~~~A~~l~~d~~~el~Ei~ 107 (109)
T cd05492 85 D-SEQYDAARWLYRDTCHDLRELR 107 (109)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHh
Confidence 6 9999999999998888777763
No 246
>KOG1188|consensus
Probab=99.74 E-value=1e-16 Score=180.23 Aligned_cols=288 Identities=16% Similarity=0.246 Sum_probs=207.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcccc
Q psy9598 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMF 610 (1915)
Q Consensus 531 ~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~ 610 (1915)
+.+|++...|+|++||..+++.+..+.+|...++.+.|.... ..+.+.+|+.||+|++||+++......+......
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d--s~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~-- 116 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD--SPHGVISCSSDGTVRLWDIRSQAESARISWTQQS-- 116 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCC--CCCeeEEeccCCeEEEEEeecchhhhheeccCCC--
Confidence 568888889999999999999999999999999999998743 4589999999999999999988765555443111
Q ss_pred ccccCCCCCceEEEEECCCCcEEEEEeC----CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCC
Q psy9598 611 NERIRPGNAHILCSSFSPGGLFLATGSG----DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDG 685 (1915)
Q Consensus 611 ~~~~~~~~~~V~~l~fspdg~~Lasgs~----Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG 685 (1915)
.....|++.+..++.+++|+. +-.|.+||++....... .-...|...|++|+|+|.. ++|+|||.||
T Consensus 117 -------~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~-~~~eSH~DDVT~lrFHP~~pnlLlSGSvDG 188 (376)
T KOG1188|consen 117 -------GTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLR-QLNESHNDDVTQLRFHPSDPNLLLSGSVDG 188 (376)
T ss_pred -------CCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhh-hhhhhccCcceeEEecCCCCCeEEeecccc
Confidence 246678888778888888754 67899999975544222 2357899999999999965 5899999999
Q ss_pred cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCC-CEEEEEEecCCeEEEEECCCCceEEEeeCCC
Q psy9598 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD-RWVITAINFNFQIKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 686 ~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg-~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~ 764 (1915)
.|.|||+.... ..........+...|.++.|..++ ..|.+-+. ..+..+|++..+.+...+....
T Consensus 189 LvnlfD~~~d~-------------EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH-~Etf~~~ele~~~~~~~~~~~~ 254 (376)
T KOG1188|consen 189 LVNLFDTKKDN-------------EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTH-METFAIYELEDGSEETWLENPD 254 (376)
T ss_pred eEEeeecCCCc-------------chhhHHHhhcccceeeeeeeecCCcceEEEEEc-cCceeEEEccCCChhhcccCcc
Confidence 99999987542 111122334567789999999887 34555555 8999999999887655543221
Q ss_pred ----------CCeEEEE-EccCCCCEEEEEec-CceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEE
Q psy9598 765 ----------NEVFVLE-SHPFDSRVLLSAGH-DGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALT 832 (1915)
Q Consensus 765 ----------~~V~sl~-~sp~dg~~LaSgs~-DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg 832 (1915)
..-+.|. .+|.+..+++.++. -|...++-+.......+.+-...+.++|...|.++.|...+.++.+|
T Consensus 255 ~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TG 334 (376)
T KOG1188|consen 255 VSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTG 334 (376)
T ss_pred chhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeecc
Confidence 0001121 23546666666665 56666665542111112222234456666788999999999999999
Q ss_pred eCCCeEEEEeCC
Q psy9598 833 DSYGHLLVYGLG 844 (1915)
Q Consensus 833 ~~dG~I~Iwdl~ 844 (1915)
+.||.|.+|...
T Consensus 335 GEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 335 GEDGLLQAWKVE 346 (376)
T ss_pred CCCceEEEEecC
Confidence 999999999863
No 247
>KOG0642|consensus
Probab=99.74 E-value=2.4e-17 Score=195.82 Aligned_cols=269 Identities=20% Similarity=0.255 Sum_probs=204.0
Q ss_pred EEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC--------CceEEEeecCCCCeEEEEeccCccCCCcEEEEEe
Q psy9598 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--------LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 583 (1915)
Q Consensus 512 ~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t--------g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs 583 (1915)
.++..|...|..++|.+....|++|+.||+|.+|+++. ..++.+|.+|.++|.|+++.+ ++..+++|+
T Consensus 288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~----n~~~~ysgg 363 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPS----NGEHCYSGG 363 (577)
T ss_pred eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecC----CceEEEeec
Confidence 47788999999999999999999999999999999932 357889999999999999998 459999999
Q ss_pred CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC
Q psy9598 584 TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663 (1915)
Q Consensus 584 ~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~ 663 (1915)
.||+|+.|++... .-......+......+.+|...|+.+++|.....|++++.||+|++|.... ..+ +.+....-.
T Consensus 364 ~Dg~I~~w~~p~n--~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~-~~~-~~f~~~~e~ 439 (577)
T KOG0642|consen 364 IDGTIRCWNLPPN--QDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTE-ESP-CTFGEPKEH 439 (577)
T ss_pred cCceeeeeccCCC--CCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCC-cCc-cccCCcccc
Confidence 9999999987622 122333345566777889999999999999999999999999999999843 222 222222233
Q ss_pred CCeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEec
Q psy9598 664 DKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF 742 (1915)
Q Consensus 664 ~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~ 742 (1915)
+.-.+|.|-... .+.++...-|.--++++...+...+.... ..........++.+.++|.+.+.+++..
T Consensus 440 g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~---------~~~~~~~~~~in~vVs~~~~~~~~~~he- 509 (577)
T KOG0642|consen 440 GYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESS---------ASPGPRRYPQINKVVSHPTADITFTAHE- 509 (577)
T ss_pred CCcceEeeccchhHhhhhhcccccccchhhhhhhheeecccc---------CCCcccccCccceEEecCCCCeeEeccc-
Confidence 344555554332 23333333344444444444322211100 0111113356788999999999999888
Q ss_pred CCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 743 NFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 743 Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
|+.|+++|..++.+++....|...|+++++.| +|-+|++|++||.|++|.+....+
T Consensus 510 d~~Ir~~dn~~~~~l~s~~a~~~svtslai~~-ng~~l~s~s~d~sv~l~kld~k~~ 565 (577)
T KOG0642|consen 510 DRSIRFFDNKTGKILHSMVAHKDSVTSLAIDP-NGPYLMSGSHDGSVRLWKLDVKTC 565 (577)
T ss_pred CCceecccccccccchheeeccceecceeecC-CCceEEeecCCceeehhhccchhe
Confidence 99999999999999999999999999999999 999999999999999999976655
No 248
>cd04369 Bromodomain Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=99.73 E-value=4.8e-18 Score=170.14 Aligned_cols=96 Identities=38% Similarity=0.626 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhcC--CCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q psy9598 119 KNECREVLETLWVC--PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196 (1915)
Q Consensus 119 ~~~~~~il~~l~~~--~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~ 196 (1915)
...|..++..|.++ +.+++|..||+...+|+||++|++||||++|++||.++.|.++.+|.+||+|||.||+.||+++
T Consensus 2 ~~~~~~i~~~l~~~~~~~~~~F~~~~~~~~~~~Y~~~i~~P~~l~~I~~kl~~~~Y~s~~~f~~D~~li~~Na~~~n~~~ 81 (99)
T cd04369 2 KKKLRSLLDALKKLKRDLSEPFLEPVDPKEAPDYYEVIKNPMDLSTIKKKLKNGEYKSLEEFEADVRLIFSNAKTYNGPG 81 (99)
T ss_pred HHHHHHHHHHHHhhcccccHHHhcCCChhcCCCHHHHHhCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 35799999999999 9999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy9598 197 RSKIYIMTTRLSEFAEEHL 215 (1915)
Q Consensus 197 ~s~i~~~a~~l~~~f~~~~ 215 (1915)
+.++.+|..|+..|++.+
T Consensus 82 -~~~~~~a~~l~~~~~~~~ 99 (99)
T cd04369 82 -SPIYKDAKKLEKLFEKLL 99 (99)
T ss_pred -CHHHHHHHHHHHHHHHhC
Confidence 999999999999998763
No 249
>KOG4227|consensus
Probab=99.73 E-value=2.3e-16 Score=177.88 Aligned_cols=306 Identities=12% Similarity=0.126 Sum_probs=219.9
Q ss_pred EEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC------CCceEEEeec-CCCCeEEEEeccCccCCCcEEEEEe
Q psy9598 511 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ------TLAPISVLVG-HQGIITGVNFCPLEVNGFNYLASTS 583 (1915)
Q Consensus 511 ~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~------tg~~~~~l~~-h~~~V~sl~fsp~~~~d~~~L~sgs 583 (1915)
.+.+.+|.+.|++|.|+.++++||+|+.|..++||.+. +.+++..... |...|.|++|.. ....|++|+
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~----~N~~~~SG~ 124 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL----ENRFLYSGE 124 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc----CCeeEecCC
Confidence 34567999999999999999999999999999999985 3466666543 558999999986 458999999
Q ss_pred CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC
Q psy9598 584 TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663 (1915)
Q Consensus 584 ~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~ 663 (1915)
.+|+|.+.|+.+.+.+....-. ...+.|+.+..+|..+.|++.+.+|.|.+||++....+.....+....
T Consensus 125 ~~~~VI~HDiEt~qsi~V~~~~----------~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~ 194 (609)
T KOG4227|consen 125 RWGTVIKHDIETKQSIYVANEN----------NNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSG 194 (609)
T ss_pred CcceeEeeecccceeeeeeccc----------CcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCC
Confidence 9999999999987643322211 224689999999999999999999999999997655455555555556
Q ss_pred CCeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEec
Q psy9598 664 DKVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF 742 (1915)
Q Consensus 664 ~~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~ 742 (1915)
....++-|+|-.. +|++++..|-+-+||++..+.......+. ..+........++.|+|+|..+++--.
T Consensus 195 ~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~---------~~L~~~~~~~M~~~~~~~G~Q~msiRR- 264 (609)
T KOG4227|consen 195 KNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMF---------KGLPQENTEWMGSLWSPSGNQFMSIRR- 264 (609)
T ss_pred ccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhcc---------ccCcccchhhhheeeCCCCCeehhhhc-
Confidence 6788888998754 67788899999999998765322111111 111111223456889999998887665
Q ss_pred CCeEEEEECCCCceEEEeeCCCC-------CeEEEEEccCCCCEEEEEecCceEEEEECCCCcccc----cee-------
Q psy9598 743 NFQIKIWDAFNGDLVQVLKGHTN-------EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRG----YKW------- 804 (1915)
Q Consensus 743 Dg~I~vwD~~tg~~i~~l~gH~~-------~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~----~~~------- 804 (1915)
...-.+||+.+..|...-..|.. .+.+++|.. ...++||+.+-.|+||.+....... +-.
T Consensus 265 ~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~--D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~ 342 (609)
T KOG4227|consen 265 GKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFID--DYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPS 342 (609)
T ss_pred cCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeec--ceeeeccCcccceEEEecCCCccccCccccCcchhhCch
Confidence 45556788876544332223332 456677764 4559999999999999985422100 000
Q ss_pred --e---eeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9598 805 --F---HNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 805 --~---~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwd 842 (1915)
+ .-++...|...+..|.|+|...+|++.+....++||.
T Consensus 343 ~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS 385 (609)
T KOG4227|consen 343 EIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWS 385 (609)
T ss_pred hheecceeEEEecccccccceeecCCcceEeccchhhheeccc
Confidence 0 0012224557788899999999999999999999996
No 250
>KOG2919|consensus
Probab=99.73 E-value=5.4e-16 Score=172.52 Aligned_cols=281 Identities=19% Similarity=0.254 Sum_probs=204.7
Q ss_pred EEEEEEcCCCCEEEEEECCCcEEEEECCCC--------c----EEEEEe-CCCCCEEEEEEe-------CCCCEEEEEeC
Q psy9598 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDG--------K----LLATLR-GCSGEISDIAID-------NRNILLAAGTV 538 (1915)
Q Consensus 479 V~~vafspdg~~LaTGs~Dg~I~IWd~~tg--------~----~~~~l~-gH~~~I~~Lafs-------pdg~~LaSgs~ 538 (1915)
...+.|+|||..|++-+.|..+.+|++... . ...+++ .....|...+|- |+..++|+.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 345789999999999999999999997421 1 111221 123457777774 57789999999
Q ss_pred CCcEEEEECCCCceEEEeec--CCC---CeEEEEeccCccCCCcEEEEEeCCCeEEEEec-ccCccccceeccCcccccc
Q psy9598 539 DKTIRIWNLQTLAPISVLVG--HQG---IITGVNFCPLEVNGFNYLASTSTDGCIGFWKY-KLDIDISKTVFHEPVMFNE 612 (1915)
Q Consensus 539 DgtIrVWDl~tg~~~~~l~~--h~~---~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl-~~~~~~~~~~~~~~~~~~~ 612 (1915)
+.-|++||.-+|+....+.+ |.. ...+++|+|+ |..|++|. ..+|++||+ +.+....... .+..
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~D----GeqlfaGy-krcirvFdt~RpGr~c~vy~-----t~~~ 201 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPD----GEQLFAGY-KRCIRVFDTSRPGRDCPVYT-----TVTK 201 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCC----CCeEeecc-cceEEEeeccCCCCCCcchh-----hhhc
Confidence 99999999999998887764 443 3468999995 47776654 578999998 4443211111 1111
Q ss_pred ccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-CCcEEEE
Q psy9598 613 RIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-DGTALIW 690 (1915)
Q Consensus 613 ~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG~I~IW 690 (1915)
...+..+-|.|++|+|-. ..+++|+....+-||.-. ....+..+.+|.+.|+.++|+++|+.|++|+. |-.|.+|
T Consensus 202 ~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~---~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~W 278 (406)
T KOG2919|consen 202 GKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD---GRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCW 278 (406)
T ss_pred ccccccceeeeeeccCCCCcceeeecccceeeeEecC---CCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEE
Confidence 122335778999999954 489999998888888763 33456667899999999999999999999984 7789999
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC-CceEEEeeCCCCCeEE
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-GDLVQVLKGHTNEVFV 769 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-g~~i~~l~gH~~~V~s 769 (1915)
|++........+ .........-.-....|+|.+|++|+. ||.|++||+.+ |..+..+..|...|+.
T Consensus 279 DiR~~~~pv~~L------------~rhv~~TNQRI~FDld~~~~~LasG~t-dG~V~vwdlk~~gn~~sv~~~~sd~vNg 345 (406)
T KOG2919|consen 279 DIRYSRDPVYAL------------ERHVGDTNQRILFDLDPKGEILASGDT-DGSVRVWDLKDLGNEVSVTGNYSDTVNG 345 (406)
T ss_pred eehhccchhhhh------------hhhccCccceEEEecCCCCceeeccCC-CccEEEEecCCCCCcccccccccccccc
Confidence 998654221110 001111222233566789999999988 99999999998 7888999999999999
Q ss_pred EEEccCCCCEEEEEecC
Q psy9598 770 LESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 770 l~~sp~dg~~LaSgs~D 786 (1915)
++++| .-.+++|++..
T Consensus 346 vslnP-~mpilatssGq 361 (406)
T KOG2919|consen 346 VSLNP-IMPILATSSGQ 361 (406)
T ss_pred eecCc-ccceeeeccCc
Confidence 99999 56777777654
No 251
>cd05526 Bromo_polybromo_VI Bromodomain, polybromo repeat VI. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.72 E-value=1.8e-17 Score=163.11 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhh
Q psy9598 1532 NWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSR 1605 (1915)
Q Consensus 1532 ~~~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~ 1605 (1915)
.+++.+..|+..|++|.+ |.||.++|+ ..|+||.+|++||||.+|++||+.|.|.++++|..||.|||+||+
T Consensus 3 ~vq~~l~~l~~~V~~~~D~~Gr~~s~~f~~LP~--~~~~~~~~ik~Pi~l~~Ik~ki~~~~Y~~ld~~~~D~~lmf~NAr 80 (110)
T cd05526 3 LVQELLATLFVSVMNHQDEEGRCYSDSLAELPE--LAVDGVGPKKIPLTLDIIKRNVDKGRYRRLDKFQEDMFEVLERAR 80 (110)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCchHHHHHCCC--cccCchhhhcCCccHHHHHHHHHcCCcCcHHHHHHHHHHHHHHHH
Confidence 456778999999999876 789999999 446888999999999999999999999999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1606 NYNQNKRSKIYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1606 ~yN~~~~s~i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
+||.++ |.||.+|..|+.+|..+.+++.
T Consensus 81 ~yN~~~-S~iy~dA~eLq~~f~~~rd~~~ 108 (110)
T cd05526 81 RLSRTD-SEIYEDAVELQQFFIKIRDELC 108 (110)
T ss_pred HhCccc-CHHHHHHHHHHHHHHHHHHHHh
Confidence 999988 9999999999999999988875
No 252
>KOG1587|consensus
Probab=99.71 E-value=1e-15 Score=192.75 Aligned_cols=282 Identities=19% Similarity=0.253 Sum_probs=210.3
Q ss_pred cEEEEECCCC-ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 541 TIRIWNLQTL-APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 541 tIrVWDl~tg-~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
.+.||++... .+-..+. ....|+|+.|+|.. .++|+.|+.+|.|.+||++.+.... +.........|..
T Consensus 223 ~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~---p~ll~gG~y~GqV~lWD~~~~~~~~------~s~ls~~~~sh~~ 292 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFD---PNLLAGGCYNGQVVLWDLRKGSDTP------PSGLSALEVSHSE 292 (555)
T ss_pred eEEEEecCCCCCceEEEe-cCCceeEEEeccCC---cceEEeeccCceEEEEEccCCCCCC------CcccccccccCCc
Confidence 7899999875 4444443 56789999999964 5899999999999999998875421 1122233446788
Q ss_pred ceEEEEECCCCcE--EEEEeCCCeEEEEEecCCCCCceeEEec---------cCCCCeeEEEEcCCC-CEEEEEeCCCcE
Q psy9598 620 HILCSSFSPGGLF--LATGSGDHHVRVYKMDGVDSPLGILEVE---------EHSDKVDSIQWSHSH-LRFVSGSRDGTA 687 (1915)
Q Consensus 620 ~V~~l~fspdg~~--Lasgs~Dg~I~IwDl~~~~~~~~i~~l~---------~h~~~V~sl~fspdg-~~L~sgs~DG~I 687 (1915)
.++.+.|..+..- +++++.||.|..|+++....+.....+. .....++++.|.+.. ..|++|+..|.|
T Consensus 293 ~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v 372 (555)
T KOG1587|consen 293 PVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKV 372 (555)
T ss_pred CeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEE
Confidence 8999999875444 9999999999999987544433332221 123468889998754 589999999998
Q ss_pred EEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC-CCceEEEeeCCCCC
Q psy9598 688 LIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF-NGDLVQVLKGHTNE 766 (1915)
Q Consensus 688 ~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~-tg~~i~~l~gH~~~ 766 (1915)
..-......... ............|.+.|.++.++|-+..++.++. |.+|+||... ...++..+..+...
T Consensus 373 ~~~~r~g~~~~~--------~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~ 443 (555)
T KOG1587|consen 373 YKGCRKGYTPAP--------EVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDY 443 (555)
T ss_pred EEEeccCCcccc--------cccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccce
Confidence 763322221000 0111223345568899999999999999888888 9999999987 67788888888888
Q ss_pred eEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9598 767 VFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 767 V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
|++++|||....+|+++..||.|.|||+.......+.... .+....+.+.|++.|.+|++|+..|++++|++...
T Consensus 444 v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~-----~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 444 VTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQK-----VCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred eeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccc-----ccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 9999999988889999999999999999776553233322 12456677889999999999999999999999743
No 253
>KOG0322|consensus
Probab=99.71 E-value=1.7e-16 Score=172.46 Aligned_cols=295 Identities=16% Similarity=0.175 Sum_probs=204.6
Q ss_pred EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEee-cCCCCeEEEEeccCccCCCcEEEEEeCCCeE
Q psy9598 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV-GHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~-~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI 588 (1915)
+...|++|.+.|+++.|..++. |++|..-|.|++|++++...+..+. .|...|+.+...|. ..|.+-+.|+.+
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-----d~l~tqgRd~~L 79 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-----DSLDTQGRDPLL 79 (323)
T ss_pred CeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-----cchhhcCCCceE
Confidence 4567889999999999988775 9999999999999999999888888 56778999988873 688999999999
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECC-----CCc----EEEEEeCCC-eEEEEEecCCCCCceeEE
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP-----GGL----FLATGSGDH-HVRVYKMDGVDSPLGILE 658 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp-----dg~----~Lasgs~Dg-~I~IwDl~~~~~~~~i~~ 658 (1915)
.+|++..+..+.... -.++++.|.+ .++ .++.-+... .+++-|. .....+..
T Consensus 80 ~lw~ia~s~~i~i~S---------------i~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~---g~~tqv~i 141 (323)
T KOG0322|consen 80 ILWTIAYSAFISIHS---------------IVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDG---GDTTQVQI 141 (323)
T ss_pred EEEEccCcceEEEee---------------eeccccccccceeccCCCcchhheecCCcccchhhhhcc---CccceeEc
Confidence 999998753222111 1122222222 111 111111100 1222222 11111111
Q ss_pred ----eccCCCCeeEEEEcCC-CC--EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECC
Q psy9598 659 ----VEEHSDKVDSIQWSHS-HL--RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA 731 (1915)
Q Consensus 659 ----l~~h~~~V~sl~fspd-g~--~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~sp 731 (1915)
-.+..+.+.|..+... +. +|++|..+|.|.+||+.++...... ....+.......|...|.++.+.+
T Consensus 142 ~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~------~~~~kv~~~~ash~qpvlsldyas 215 (323)
T KOG0322|consen 142 ADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQL------PQSSKVESPNASHKQPVLSLDYAS 215 (323)
T ss_pred cCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecc------ccccccccchhhccCcceeeeech
Confidence 1234466777765433 22 5678889999999999987432211 111223344556888999999987
Q ss_pred CCCEEEEEEecCCeEEEEECCC--Cce--EEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeee
Q psy9598 732 SDRWVITAINFNFQIKIWDAFN--GDL--VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHN 807 (1915)
Q Consensus 732 dg~~L~t~s~~Dg~I~vwD~~t--g~~--i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~ 807 (1915)
....=+.++. +..+..|++.. +.+ -..+.-..-.|..+.+-| |++++||+|+||.|+||+..+..+ +..+.
T Consensus 216 ~~~rGisgga-~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRp-D~KIlATAGWD~RiRVyswrtl~p--LAVLk- 290 (323)
T KOG0322|consen 216 SCDRGISGGA-DDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRP-DGKILATAGWDHRIRVYSWRTLNP--LAVLK- 290 (323)
T ss_pred hhcCCcCCCc-cccceeeeeccccCcccccceEEecCCCccceEEcc-CCcEEeecccCCcEEEEEeccCCc--hhhhh-
Confidence 7666666776 67788888753 332 222233344588889999 999999999999999999999998 66555
Q ss_pred eecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 808 IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 808 ~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
.|.+.|.+++|+|+..++|+++.|+.|.+|++
T Consensus 291 ----yHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 291 ----YHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ----hhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 56789999999999999999999999999986
No 254
>KOG1538|consensus
Probab=99.70 E-value=4.3e-16 Score=185.31 Aligned_cols=277 Identities=16% Similarity=0.192 Sum_probs=207.7
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccc
Q psy9598 520 EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 599 (1915)
Q Consensus 520 ~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~ 599 (1915)
.|..++|-|||..|+.+. +..+.|||...|..+.++.+|.+.|+|++|+. +|..+++|+.|..|.+|.-.-..
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~----dGkrFASG~aDK~VI~W~~klEG-- 86 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAK----DGKRFASGSADKSVIIWTSKLEG-- 86 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEcc----CCceeccCCCceeEEEecccccc--
Confidence 799999999999887776 45799999999999999999999999999998 56999999999999999754321
Q ss_pred cceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEE
Q psy9598 600 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 679 (1915)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~ 679 (1915)
.+ ...|...|.|+.|+|-...|++++-+ ..-+|...... +. -......|.+.+|..||.+|+
T Consensus 87 -~L-----------kYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~----V~-K~kss~R~~~CsWtnDGqyla 148 (1081)
T KOG1538|consen 87 -IL-----------KYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKS----VS-KHKSSSRIICCSWTNDGQYLA 148 (1081)
T ss_pred -ee-----------eeccCCeeeEeecCchHHHhhhcchh-hccccChhhhh----HH-hhhhheeEEEeeecCCCcEEE
Confidence 11 12477899999999999999988764 45688763211 11 112345688899999999999
Q ss_pred EEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC-----EEEEEEecCCeEEEEECCCC
Q psy9598 680 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR-----WVITAINFNFQIKIWDAFNG 754 (1915)
Q Consensus 680 sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~-----~L~t~s~~Dg~I~vwD~~tg 754 (1915)
.|-.+|+|.|-+-....... .....+...+|++++|+|... .+++... ..++.+|.+ +|
T Consensus 149 lG~~nGTIsiRNk~gEek~~--------------I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW-~qTLSFy~L-sG 212 (1081)
T KOG1538|consen 149 LGMFNGTISIRNKNGEEKVK--------------IERPGGSNSPIWSICWNPSSGEGRNDILAVADW-GQTLSFYQL-SG 212 (1081)
T ss_pred EeccCceEEeecCCCCcceE--------------EeCCCCCCCCceEEEecCCCCCCccceEEEEec-cceeEEEEe-cc
Confidence 99999999987433222111 112234678899999998743 4445544 667777665 45
Q ss_pred ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeC
Q psy9598 755 DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS 834 (1915)
Q Consensus 755 ~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~ 834 (1915)
+.+..-..-.-.-.|+.+.+ +|.+++.||.|+.+.+|.-..-. +-++ +.....|+.++..|+++.++.|+.
T Consensus 213 ~~Igk~r~L~FdP~CisYf~-NGEy~LiGGsdk~L~~fTR~Gvr---LGTv-----g~~D~WIWtV~~~PNsQ~v~~GCq 283 (1081)
T KOG1538|consen 213 KQIGKDRALNFDPCCISYFT-NGEYILLGGSDKQLSLFTRDGVR---LGTV-----GEQDSWIWTVQAKPNSQYVVVGCQ 283 (1081)
T ss_pred eeecccccCCCCchhheecc-CCcEEEEccCCCceEEEeecCeE---Eeec-----cccceeEEEEEEccCCceEEEEEc
Confidence 55543333333457888888 99999999999999999764322 2222 234578999999999999999999
Q ss_pred CCeEEEEeCCCC
Q psy9598 835 YGHLLVYGLGGF 846 (1915)
Q Consensus 835 dG~I~Iwdl~s~ 846 (1915)
||+|--|++...
T Consensus 284 DGTiACyNl~fS 295 (1081)
T KOG1538|consen 284 DGTIACYNLIFS 295 (1081)
T ss_pred cCeeehhhhHHh
Confidence 999999987643
No 255
>PF00439 Bromodomain: Bromodomain; InterPro: IPR001487 Bromodomains are found in a variety of mammalian, invertebrate and yeast DNA-binding proteins []. Bromodomains can interact with acetylated lysine []. In some proteins, the classical bromodomain has diverged to such an extent that parts of the region are either missing or contain an insertion (e.g., mammalian protein HRX, Caenorhabditis elegans hypothetical protein ZK783.4, yeast protein YTA7). The bromodomain may occur as a single copy, or in duplicate. The precise function of the domain is unclear, but it may be involved in protein-protein interactions and may play a role in assembly or activity of multi-component complexes involved in transcriptional activation [].; GO: 0005515 protein binding; PDB: 3P1C_A 4A9K_B 3SVH_A 3P1E_B 3P1F_A 1JSP_B 2L85_A 3P1D_B 3DWY_B 2D82_A ....
Probab=99.70 E-value=1.7e-17 Score=160.62 Aligned_cols=84 Identities=46% Similarity=0.790 Sum_probs=80.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCHHH
Q psy9598 1537 CREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 1616 (1915)
Q Consensus 1537 ~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~i~ 1616 (1915)
|+.||+.|++++.+.+|..||+...+|+|+++|++||||++|++||++|.|.++.+|..||++||.||+.||+++ |.+|
T Consensus 1 C~~il~~l~~~~~~~~F~~~~~~~~~p~y~~~i~~P~dL~~I~~kl~~~~Y~s~~~f~~Dv~~i~~Na~~yn~~~-s~~~ 79 (84)
T PF00439_consen 1 CREILEELMKHPISSPFSKPVDPKEYPDYYEIIKNPMDLSTIRKKLENGKYKSIEEFEADVRLIFQNARRYNPPD-SPIY 79 (84)
T ss_dssp HHHHHHHHHTSTTGGGGSSSTHTTTSTTHHHHSSSS--HHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHSCTT-SHHH
T ss_pred CHHHHHHHHcCCCchhhcCCCChhhCCCHHHHHhhccchhhhhHHhhccchhhHHHHHHHHHHHHHHHHHHCCCc-CHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999988 9999
Q ss_pred HHHHH
Q psy9598 1617 IMTTR 1621 (1915)
Q Consensus 1617 ~~a~~ 1621 (1915)
.+|.+
T Consensus 80 ~~A~~ 84 (84)
T PF00439_consen 80 KAAEK 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99974
No 256
>KOG0303|consensus
Probab=99.70 E-value=7e-16 Score=175.72 Aligned_cols=209 Identities=18% Similarity=0.283 Sum_probs=167.6
Q ss_pred EecCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCC-------cEEEEEeCCCCCEEEEEEeCC-CCEEEEEeCCCc
Q psy9598 471 VNLGHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDG-------KLLATLRGCSGEISDIAIDNR-NILLAAGTVDKT 541 (1915)
Q Consensus 471 ~l~gH~~~V~~vafsp-dg~~LaTGs~Dg~I~IWd~~tg-------~~~~~l~gH~~~I~~Lafspd-g~~LaSgs~Dgt 541 (1915)
.+.||+++|..++|+| +...||+||.|.+|.||.+..+ +.+..|.||+..|--++|+|. .+.|+|++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 4569999999999998 5678999999999999998754 356778999999999999996 568999999999
Q ss_pred EEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCce
Q psy9598 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI 621 (1915)
Q Consensus 542 IrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V 621 (1915)
|.||++.+|..+.++. |.+.|+++.|+- +|.+|+++|.|..|+|||.+++..+.....+. ...-
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~----dGs~l~TtckDKkvRv~dpr~~~~v~e~~~he-----------G~k~ 219 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNR----DGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHE-----------GAKP 219 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEecc----CCceeeeecccceeEEEcCCCCcEeeeccccc-----------CCCc
Confidence 9999999999998887 999999999997 56999999999999999999987654442221 1223
Q ss_pred EEEEECCCCcEEEEEe---CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEE-EEeCCCcEEEEEccCCc
Q psy9598 622 LCSSFSPGGLFLATGS---GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV-SGSRDGTALIWYYKCSQ 696 (1915)
Q Consensus 622 ~~l~fspdg~~Lasgs---~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~-sgs~DG~I~IWDl~~~~ 696 (1915)
..+.|-.+|.++.+|- .+..+-|||......+.....+...++ |.---|.++...++ +|-.|+.|+.|.+....
T Consensus 220 ~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnG-vl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 220 ARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNG-VLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred ceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCc-eEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 4456777887555553 367899999987777777777765544 44344778777665 56689999999987665
No 257
>KOG0290|consensus
Probab=99.70 E-value=3.3e-15 Score=164.32 Aligned_cols=308 Identities=17% Similarity=0.203 Sum_probs=207.6
Q ss_pred EEEEeCCCCCEEEEEEeC---CCCEEEEEeC----CCcEEEEECC--CCceEEEe-ecCCCCeEEEEeccCccCCC-cEE
Q psy9598 511 LATLRGCSGEISDIAIDN---RNILLAAGTV----DKTIRIWNLQ--TLAPISVL-VGHQGIITGVNFCPLEVNGF-NYL 579 (1915)
Q Consensus 511 ~~~l~gH~~~I~~Lafsp---dg~~LaSgs~----DgtIrVWDl~--tg~~~~~l-~~h~~~V~sl~fsp~~~~d~-~~L 579 (1915)
+..+..+ -.+.++.|+. ...+||.||. .+.|.|-.+. +++.+..- ..|.-+++.+.|.|+..+-. ++|
T Consensus 38 iy~Y~ap-~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlL 116 (364)
T KOG0290|consen 38 IYTYNAP-WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLL 116 (364)
T ss_pred EEEecCC-CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchh
Confidence 3444432 3567788873 2446777774 3556665443 44433322 35888999999999763222 344
Q ss_pred EEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECC-CCcEEEEEeCCCeEEEEEecCCCCCceeEE
Q psy9598 580 ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP-GGLFLATGSGDHHVRVYKMDGVDSPLGILE 658 (1915)
Q Consensus 580 ~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~ 658 (1915)
++++ -.+++|.+......... . ......+...+..+++++.|+. +.++|.+.+-|-+..|||+........-..
T Consensus 117 ATs~--D~LRlWri~~ee~~~~~--~-~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ 191 (364)
T KOG0290|consen 117 ATSS--DFLRLWRIGDEESRVEL--Q-SVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ 191 (364)
T ss_pred hccc--CeEEEEeccCcCCceeh--h-hhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence 4443 36999998743211111 0 0111112233457889999987 567899999999999999965433334456
Q ss_pred eccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC-EE
Q psy9598 659 VEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR-WV 736 (1915)
Q Consensus 659 l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~-~L 736 (1915)
+-+|...|..|+|...+ ..|++.|.||.|++||++....-.+.. ...........++|++.+. ++
T Consensus 192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIY-------------E~p~~~~pLlRLswnkqDpnym 258 (364)
T KOG0290|consen 192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIY-------------EDPSPSTPLLRLSWNKQDPNYM 258 (364)
T ss_pred EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEe-------------cCCCCCCcceeeccCcCCchHH
Confidence 78999999999999865 489999999999999999765322211 1112255677899998764 45
Q ss_pred EEEEecCCeEEEEECCC-CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCc
Q psy9598 737 ITAINFNFQIKIWDAFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEG 815 (1915)
Q Consensus 737 ~t~s~~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~ 815 (1915)
++-......|.|.|++. +.++..|.+|.+.|++|+|.|.....|+|||.|..+.|||+...-. ......++.-...+
T Consensus 259 ATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~--~~~~dPilay~a~~ 336 (364)
T KOG0290|consen 259 ATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPR--ENGEDPILAYTAGG 336 (364)
T ss_pred hhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccc--cCCCCchhhhhccc
Confidence 54444356799999985 6789999999999999999999999999999999999999976432 11111122223457
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCeEEE
Q psy9598 816 ALFDGKWSP-DGTTCALTDSYGHLLV 840 (1915)
Q Consensus 816 ~V~~vafSp-dg~~Lasg~~dG~I~I 840 (1915)
.|..++|++ .+..|+++... .+.|
T Consensus 337 EVNqi~Ws~~~~Dwiai~~~k-klei 361 (364)
T KOG0290|consen 337 EVNQIQWSSSQPDWIAICFGK-KLEI 361 (364)
T ss_pred eeeeeeecccCCCEEEEEecC-eeeE
Confidence 899999996 56788877653 4433
No 258
>KOG1587|consensus
Probab=99.69 E-value=3.8e-15 Score=187.59 Aligned_cols=281 Identities=18% Similarity=0.209 Sum_probs=201.0
Q ss_pred CCcEEEEECCCC-cEEEEEeCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCce--EE----EeecCCCCeEEEEe
Q psy9598 497 DLLIKLWRARDG-KLLATLRGCSGEISDIAIDN-RNILLAAGTVDKTIRIWNLQTLAP--IS----VLVGHQGIITGVNF 568 (1915)
Q Consensus 497 Dg~I~IWd~~tg-~~~~~l~gH~~~I~~Lafsp-dg~~LaSgs~DgtIrVWDl~tg~~--~~----~l~~h~~~V~sl~f 568 (1915)
++.+.||++... .+-..+. ....|+|++|+| +..+||.|+.+|.|.+||+..+.. .. ....|..+|+.+.|
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW 299 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW 299 (555)
T ss_pred CceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence 358999999876 4444444 567899999999 467888888999999999987654 22 23468899999999
Q ss_pred ccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEEEEEeCCCeEEEEEe
Q psy9598 569 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFLATGSGDHHVRVYKM 647 (1915)
Q Consensus 569 sp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl 647 (1915)
..... + .-|+++|.||.|+.|+++.-.................-......+++++|.+. -..+++|+..|.|..-.-
T Consensus 300 ~~~~~-~-~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r 377 (555)
T KOG1587|consen 300 LQNEH-N-TEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCR 377 (555)
T ss_pred eccCC-C-CceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEec
Confidence 88652 2 67999999999999987654332111111111101111123467889999884 567899999999877443
Q ss_pred cCCCC-C----ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccc
Q psy9598 648 DGVDS-P----LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKI 722 (1915)
Q Consensus 648 ~~~~~-~----~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1915)
.+... . ..+..+..|.++|.++.++|-+..++..+.|.+|+||...... ........+..
T Consensus 378 ~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~---------------~Pl~~~~~~~~ 442 (555)
T KOG1587|consen 378 KGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA---------------SPLLSLDSSPD 442 (555)
T ss_pred cCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCC---------------Ccchhhhhccc
Confidence 22222 1 2233566789999999999988866666669999999654221 11122233445
Q ss_pred cEEEEEECCCCCEEEEEEecCCeEEEEECCC--CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 723 KVTMVAWDASDRWVITAINFNFQIKIWDAFN--GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 723 ~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t--g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
.|++++|||....++++...+|.|.|||+.. ..++.+...+....+.+.|++ .+.+|++|...|+|.+|++..
T Consensus 443 ~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~-~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 443 YVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSP-NGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred eeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCC-CCcEEEEecCCCcEEEEEcCc
Confidence 5999999999988888887799999999864 455666665666677777887 899999999999999999964
No 259
>cd04369 Bromodomain Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=99.69 E-value=3.6e-17 Score=163.77 Aligned_cols=96 Identities=38% Similarity=0.626 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHcC--CCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCC
Q psy9598 1534 KNECREVLETLWVC--PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611 (1915)
Q Consensus 1534 ~~~~~~ll~~l~~~--~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~ 1611 (1915)
...|..++..|..+ +.+.+|..||++..+|+||++|++||||.+|++||..|.|.++.+|..||+|||.||+.||+.+
T Consensus 2 ~~~~~~i~~~l~~~~~~~~~~F~~~~~~~~~~~Y~~~i~~P~~l~~I~~kl~~~~Y~s~~~f~~D~~li~~Na~~~n~~~ 81 (99)
T cd04369 2 KKKLRSLLDALKKLKRDLSEPFLEPVDPKEAPDYYEVIKNPMDLSTIKKKLKNGEYKSLEEFEADVRLIFSNAKTYNGPG 81 (99)
T ss_pred HHHHHHHHHHHHhhcccccHHHhcCCChhcCCCHHHHHhCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 35799999999999 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy9598 1612 RSKIYIMTTRLSEFAEEHL 1630 (1915)
Q Consensus 1612 ~s~i~~~a~~l~~~f~~~~ 1630 (1915)
|.++.+|..|+..|++.+
T Consensus 82 -~~~~~~a~~l~~~~~~~~ 99 (99)
T cd04369 82 -SPIYKDAKKLEKLFEKLL 99 (99)
T ss_pred -CHHHHHHHHHHHHHHHhC
Confidence 999999999999998753
No 260
>KOG1517|consensus
Probab=99.69 E-value=1.9e-15 Score=188.88 Aligned_cols=295 Identities=20% Similarity=0.260 Sum_probs=210.7
Q ss_pred CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCC---CCCEEEEEEeC--CCCEEEEEeCCCcEEEEECC
Q psy9598 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGC---SGEISDIAIDN--RNILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 474 gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH---~~~I~~Lafsp--dg~~LaSgs~DgtIrVWDl~ 548 (1915)
|....-..+.|+|-...|+++...-.|+|||...++++..|..+ ...|+.|.+-. |..+|++|+.||.|+||+-.
T Consensus 1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y 1141 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDY 1141 (1387)
T ss_pred cCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccc
Confidence 33445567788988889999887779999999999998887644 34689998865 46689999999999999743
Q ss_pred -C----CceEEEeecC-------CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCC
Q psy9598 549 -T----LAPISVLVGH-------QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 549 -t----g~~~~~l~~h-------~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
+ .+.+..+.+- .+.=.-+.|... ..+|+++|.-..|+|||.........+...
T Consensus 1142 ~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~----~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~----------- 1206 (1387)
T KOG1517|consen 1142 ADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQ----SGHLLVTGDVRSIRIWDAHKEQVVADIPYG----------- 1206 (1387)
T ss_pred ccccCCceeEEeeccccccCccCCCCCeeeehhhh----CCeEEecCCeeEEEEEecccceeEeecccC-----------
Confidence 2 2233322221 111123456542 356666666889999999877654444332
Q ss_pred CCCceEEEEECC-CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCC--eeEEEEcCCCCE-EEEEeCCCcEEEEEc
Q psy9598 617 GNAHILCSSFSP-GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK--VDSIQWSHSHLR-FVSGSRDGTALIWYY 692 (1915)
Q Consensus 617 ~~~~V~~l~fsp-dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~--V~sl~fspdg~~-L~sgs~DG~I~IWDl 692 (1915)
...-|++++-+- .|+.|++|..||.|++||.+.......+.....|+.. |..+.+.+.|.. |++|+.||.|++||+
T Consensus 1207 s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~Dl 1286 (1387)
T KOG1517|consen 1207 SSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDL 1286 (1387)
T ss_pred CCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEec
Confidence 234455554443 4789999999999999999765555566777889887 999999987765 999999999999999
Q ss_pred cCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCC-------CC
Q psy9598 693 KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH-------TN 765 (1915)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH-------~~ 765 (1915)
+...... .... ......++.++++..+.....|++|+. +.|+||++. |+.+..+..+ .+
T Consensus 1287 R~~~~e~-~~~i----------v~~~~yGs~lTal~VH~hapiiAsGs~--q~ikIy~~~-G~~l~~~k~n~~F~~q~~g 1352 (1387)
T KOG1517|consen 1287 RMSSKET-FLTI----------VAHWEYGSALTALTVHEHAPIIASGSA--QLIKIYSLS-GEQLNIIKYNPGFMGQRIG 1352 (1387)
T ss_pred ccCcccc-ccee----------eeccccCccceeeeeccCCCeeeecCc--ceEEEEecC-hhhhcccccCcccccCcCC
Confidence 8742110 0000 000111235899999999998888875 899999984 5555555433 34
Q ss_pred CeEEEEEccCCCCEEEEEecCceEEEEECCCCc
Q psy9598 766 EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798 (1915)
Q Consensus 766 ~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~ 798 (1915)
.+.|++||| ..-+||+|+.|.+|.||......
T Consensus 1353 s~scL~FHP-~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1353 SVSCLAFHP-HRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred Ccceeeecc-hhHhhhhccCCceEEEeecCCcC
Confidence 679999999 77788999999999999876544
No 261
>cd05492 Bromo_ZMYND11 Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene expression. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Probab=99.69 E-value=8.3e-17 Score=159.50 Aligned_cols=96 Identities=20% Similarity=0.296 Sum_probs=85.2
Q ss_pred HHHHHHHHc-CCCCCCCCCCCC-----CCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCC
Q psy9598 1538 REVLETLWV-CPDSEPFRKPVD-----KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611 (1915)
Q Consensus 1538 ~~ll~~l~~-~~~s~~F~~pv~-----~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~ 1611 (1915)
.-++..+.. .+.+.||..||. ...+|+||++|++||||+||++||++|+|++++||..||.|||+||+.||+++
T Consensus 6 ~f~~~~~k~~lp~~~~~~~~v~~~~~~~~~~pdY~~iIk~PmDL~tI~~kl~~~~Y~s~~ef~~Dv~LI~~N~~~yNg~~ 85 (109)
T cd05492 6 KFIVSRMKSWLPPDTTNRAIVLNKRGKATKLPKRRRLIHTHLDVADIQEKINSEKYTSLEEFKADALLLLHNTAIFHGAD 85 (109)
T ss_pred HHHHHHHHhcCcccccccccccccCchhccCCCHHHHhCCCCcHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 345566666 566899999995 34699999999999999999999999999999999999999999999999988
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1612 RSKIYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1612 ~s~i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
|.+|.+|..|-+.....+.+|.
T Consensus 86 -s~~~~~A~~l~~d~~~el~Ei~ 107 (109)
T cd05492 86 -SEQYDAARWLYRDTCHDLRELR 107 (109)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988888777763
No 262
>KOG1240|consensus
Probab=99.68 E-value=4.9e-15 Score=188.40 Aligned_cols=361 Identities=11% Similarity=0.098 Sum_probs=224.6
Q ss_pred ceeeeEEecCCCCcEEEEEEcCC-CCEEEEEECCCcEEEEECCC-------CcEEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy9598 465 NLRQHYVNLGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARD-------GKLLATLRGCSGEISDIAIDNRNILLAAG 536 (1915)
Q Consensus 465 ~~~~~~~l~gH~~~V~~vafspd-g~~LaTGs~Dg~I~IWd~~t-------g~~~~~l~gH~~~I~~Lafspdg~~LaSg 536 (1915)
.-.++.+|..|...|..++.++. +.+++|||.||+|+||++.. .+...++.-..+.+.++.+.+.+..+|.|
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence 34556788899999999998764 59999999999999999753 23344555457789999999999999999
Q ss_pred eCCCcEEEEECCCC--c-----eEEEeecC-CCCeE-EEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCc
Q psy9598 537 TVDKTIRIWNLQTL--A-----PISVLVGH-QGIIT-GVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEP 607 (1915)
Q Consensus 537 s~DgtIrVWDl~tg--~-----~~~~l~~h-~~~V~-sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~ 607 (1915)
+.||.|++.++... . +......+ .+.|. .-+|.... ....|+.+...+.|..||++...........
T Consensus 1117 t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~--~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~-- 1192 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIV--QSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ-- 1192 (1431)
T ss_pred cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccc--cceeEEEEEeccceEEecchhhhhHHhhhcC--
Confidence 99999999998752 1 11111122 23333 33443321 1248888999999999999887665555443
Q ss_pred cccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC---CEEEEEe--
Q psy9598 608 VMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH---LRFVSGS-- 682 (1915)
Q Consensus 608 ~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg---~~L~sgs-- 682 (1915)
...+.|++++.+|.++++++|+..|.+.+||++ ...+..-... ++..+|..|+.+|-. ...++++
T Consensus 1193 --------~~hG~vTSi~idp~~~WlviGts~G~l~lWDLR-F~~~i~sw~~-P~~~~i~~v~~~~~~~~~S~~vs~~~~ 1262 (1431)
T KOG1240|consen 1193 --------LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLR-FRVPILSWEH-PARAPIRHVWLCPTYPQESVSVSAGSS 1262 (1431)
T ss_pred --------ccccceeEEEecCCceEEEEecCCceEEEEEee-cCceeecccC-cccCCcceEEeeccCCCCceEEEeccc
Confidence 334889999999999999999999999999994 2222222222 344677777776543 3444444
Q ss_pred CCCcEEEEEccCCceEEeeecccccCC-CCcccc--ccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceE-E
Q psy9598 683 RDGTALIWYYKCSQWRFIRLDMNTCLP-HTKETS--DETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLV-Q 758 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i-~ 758 (1915)
..+.|.+|++.++.+............ ...... ....+.......++.-.+.++++|++ |..|+.||....... .
T Consensus 1263 ~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggs-d~kIR~wD~~~p~~ss~ 1341 (1431)
T KOG1240|consen 1263 SNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGS-DMKIRKWDPTRPEISSY 1341 (1431)
T ss_pred CCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCC-ccceeeccCCCcccccc
Confidence 578899999999976655433211100 000000 01122233344455556678888888 999999998764433 2
Q ss_pred EeeCCCCCeEEEEEccCCCCEEEEEecCceEE-EEECCCCc------cccceeeeeeecCCCCcceEEEEEcCC-CCEEE
Q psy9598 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLII-IWDILSSK------QRGYKWFHNIVEGQGEGALFDGKWSPD-GTTCA 830 (1915)
Q Consensus 759 ~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~-IWdl~s~~------~~~~~~~~~~~~~~~~~~V~~vafSpd-g~~La 830 (1915)
...|..........+. +.-++.|+.--... +.....+- ...+..........|+.+|+++++... ..+|+
T Consensus 1342 ~~~~~s~~~~~~~~s~--~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llv 1419 (1431)
T KOG1240|consen 1342 AVPGPSTSYSTNSESY--DLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLV 1419 (1431)
T ss_pred cccCccccccccchhc--cccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEE
Confidence 2223222222222221 12222222110000 01111000 000122222334567789999988653 56899
Q ss_pred EEeCCCeEEEEe
Q psy9598 831 LTDSYGHLLVYG 842 (1915)
Q Consensus 831 sg~~dG~I~Iwd 842 (1915)
+++.||.|.||.
T Consensus 1420 s~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1420 SSSRDGVIKIWK 1431 (1431)
T ss_pred EecCCCeeeecC
Confidence 999999999993
No 263
>KOG1832|consensus
Probab=99.68 E-value=3.5e-17 Score=199.24 Aligned_cols=394 Identities=12% Similarity=0.095 Sum_probs=263.9
Q ss_pred HhhcccccHHHHHHHHHHhccCChHHHHHHHHHHHHhcC-----------cCcccccccCccccccHHHHHhcCCCCCCC
Q psy9598 299 TERLTRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKN-----------LLPERYDWEGATHSQTLAEVASSHPNVTAS 367 (1915)
Q Consensus 299 ~~~i~~l~~e~~~li~~~L~~~~~~~aa~~L~~e~~~~~-----------llp~r~~~~g~~~~~~~~~l~~~~~~i~~~ 367 (1915)
+..++.-..|+|.+|..+|...++...|.+|.+|..... .+.......|...++++..+..+++..++-
T Consensus 848 ~aq~sfp~~elL~li~~HL~ss~L~~~a~vl~~ea~LP~~~As~~s~fTP~~~~~~p~S~~~~p~~~~~In~~~~s~~a~ 927 (1516)
T KOG1832|consen 848 LAQESFPSNELLSLIKKHLASSTLEMPAPVLQQEAPLPKINASKQSTFTPSFSSKQPFSHDALPQSTQRINCCSNSDPAL 927 (1516)
T ss_pred hhhccCCHHHHHHHHHHHHhhcccCCchhhhhccCCCCCcccccccccCccccCCCCCCCCccchhhhhhhccCCCchhh
Confidence 334566668999999999999999999999999983210 011112234444555665555444421000
Q ss_pred hH-----------------------------H---------------------------HHHHHhC-----CCcccccCC
Q psy9598 368 FL-----------------------------P---------------------------KICQRLG-----PLLDKELKP 386 (1915)
Q Consensus 368 ~L-----------------------------~---------------------------~l~~~l~-----pll~~~~~~ 386 (1915)
.+ . .--+.++ +-...+.++
T Consensus 928 ~~~Se~~a~~a~~~~~~a~~q~p~~~~~p~~~~~s~l~~~~~p~rer~s~~f~~k~~l~~~~s~l~a~~~g~s~~gq~~~ 1007 (1516)
T KOG1832|consen 928 ADTSETAAELALKNDLDADAQFPTPISFPRKRKLSELRDSSVPGRERRSSTFADKSGLQTPASALDANQSGSSRLGQMTP 1007 (1516)
T ss_pred cccccccchhccCCCCCccccCCCCCCCCcccCCccccCcccccccccCCCCcccccccChhhhcCCCCCCccccccCCC
Confidence 00 0 0001111 111123345
Q ss_pred CCCCcceecccCccccccchhhhccccccchhHHHhc-CCCcccccCccCccchhhcccCccccc---cCCCeEEEeccc
Q psy9598 387 NFPGLKSLLSGGSQSLLRSEKSLAKSVLSSYDYIARQ-HGTSLLVPNSVKVHNTVNVLRSREYSG---PLSRSLMISSHK 462 (1915)
Q Consensus 387 ~~~~~~tll~~g~~sll~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~v~~l~~r~~tg---~~d~~~~i~~~~ 462 (1915)
..|...+|-+...+++..+|..|..||.+++.+.+++ |.||-+......+.|+...+..|++.. +.++.-.-....
T Consensus 1008 ~~p~~~sLdSIVt~Ylr~QH~~CknPVtTcPPfSLf~pH~CPEpk~~~~ap~N~t~Rl~~rel~~~y~gV~g~~~dr~~I 1087 (1516)
T KOG1832|consen 1008 ANPERLSLDSIVTQYLRHQHRQCKNPVTTCPPFSLFHPHVCPEPKRLLEAPLNMTGRLGTRELQSFYSGVHGNRRDRQFI 1087 (1516)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhcCCcccCCChhhcCCccCCChHHHhhcchhhhhcccchhhcCcccccccCcccchhh
Confidence 5566778888888999999999999999999999887 666655444555666665555555432 222222222345
Q ss_pred CCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCC--
Q psy9598 463 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDK-- 540 (1915)
Q Consensus 463 ~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~Dg-- 540 (1915)
++.++.+++|..|+...+|++|+-+.++|+.|+..|.|++|++.+|.......+|.+.|+.|.-+.+|.++++.+.-.
T Consensus 1088 FSRFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~P 1167 (1516)
T KOG1832|consen 1088 FSRFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSP 1167 (1516)
T ss_pred HhhcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCc
Confidence 677888889999999999999999999999999999999999999999999999999999999999998877665433
Q ss_pred cEEEEECCC-CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 541 TIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 541 tIrVWDl~t-g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
...+|++.+ +.+.+++.+ -.++.|+... ..-+.|+....+.+||+.++..+.++.... .+...
T Consensus 1168 lsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~----q~r~~gt~~d~a~~YDvqT~~~l~tylt~~--------~~~~y 1231 (1516)
T KOG1832|consen 1168 LSALWDASSTGGPRHSFDE----DKAVKFSNSL----QFRALGTEADDALLYDVQTCSPLQTYLTDT--------VTSSY 1231 (1516)
T ss_pred hHHHhccccccCccccccc----cceeehhhhH----HHHHhcccccceEEEecccCcHHHHhcCcc--------hhhhh
Confidence 578999864 556666653 3578888643 333444444568899999987655432221 01112
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEE
Q psy9598 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRF 699 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~ 699 (1915)
.-+++.|+|+..+|+-- | .+||++. +..++.+...+..+.+ .|+|+|..++..+. |||+++....+
T Consensus 1232 ~~n~a~FsP~D~LIlnd---G--vLWDvR~---~~aIh~FD~ft~~~~G-~FHP~g~eVIINSE-----IwD~RTF~lLh 1297 (1516)
T KOG1832|consen 1232 SNNLAHFSPCDTLILND---G--VLWDVRI---PEAIHRFDQFTDYGGG-GFHPSGNEVIINSE-----IWDMRTFKLLH 1297 (1516)
T ss_pred hccccccCCCcceEeeC---c--eeeeecc---HHHHhhhhhheecccc-cccCCCceEEeech-----hhhhHHHHHHh
Confidence 23788999999877643 3 2899953 3445555444433333 39999999999877 99999877443
Q ss_pred eeecccccCCCCccccccccccccEEEEEECCCCCEEEEEE
Q psy9598 700 IRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 740 (1915)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s 740 (1915)
... ...-+.|.|+..|..+++.-
T Consensus 1298 ~VP------------------~Ldqc~VtFNstG~VmYa~~ 1320 (1516)
T KOG1832|consen 1298 SVP------------------SLDQCAVTFNSTGDVMYAML 1320 (1516)
T ss_pred cCc------------------cccceEEEeccCccchhhhh
Confidence 221 12234577888887766543
No 264
>KOG1334|consensus
Probab=99.68 E-value=3.5e-16 Score=182.44 Aligned_cols=315 Identities=16% Similarity=0.192 Sum_probs=235.8
Q ss_pred cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe-ecCCCCeEEEEeccCccCCCcEEEEEeCCCe
Q psy9598 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL-VGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587 (1915)
Q Consensus 509 ~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l-~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dgt 587 (1915)
.+...|.+|.+.|+.|.|+..|..|+|||.|..|.+||+.++.++..+ .||...|....|.|.. +...|++++.||.
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s--~d~ti~~~s~dgq 210 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFS--GDRTIVTSSRDGQ 210 (559)
T ss_pred hhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCC--CCcCceeccccCc
Confidence 455678899999999999999999999999999999999998887766 4799999999999976 6789999999999
Q ss_pred EEEEecccCccccceeccCccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCC--
Q psy9598 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD-- 664 (1915)
Q Consensus 588 I~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~-- 664 (1915)
|++=.+...... .....+..|.+.|.-++.-|+. .-|.+++.|+.+.-+|++.......+..-..+..
T Consensus 211 vr~s~i~~t~~~---------e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~ 281 (559)
T KOG1334|consen 211 VRVSEILETGYV---------ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKER 281 (559)
T ss_pred eeeeeeccccce---------ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccc
Confidence 998665433221 1123445778999999999975 4588999999999999965433333333333444
Q ss_pred -CeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEec
Q psy9598 665 -KVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF 742 (1915)
Q Consensus 665 -~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~ 742 (1915)
...+|+..|... .|++|+.|..+++||.+.-......-......+. .........|++++|+.++.-|+++.+
T Consensus 282 v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~----hl~~d~~v~ITgl~Ysh~~sElLaSYn- 356 (559)
T KOG1334|consen 282 VGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPH----HLVEDDPVNITGLVYSHDGSELLASYN- 356 (559)
T ss_pred eeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCc----cccccCcccceeEEecCCccceeeeec-
Confidence 567888888765 8999999999999998764422111000111111 112245677999999999888888888
Q ss_pred CCeEEEEECCC--C----------ceEEE-eeCCCC--CeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeee
Q psy9598 743 NFQIKIWDAFN--G----------DLVQV-LKGHTN--EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHN 807 (1915)
Q Consensus 743 Dg~I~vwD~~t--g----------~~i~~-l~gH~~--~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~ 807 (1915)
|-.|+++.-.- | ..+.. ++||.+ .|.++-|-.....++++|+.=|.|.||+-.+++. +..+.
T Consensus 357 De~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~ei--i~~Me- 433 (559)
T KOG1334|consen 357 DEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEI--IRFME- 433 (559)
T ss_pred ccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHH--HHHhh-
Confidence 88999996432 2 23333 789965 4666665422788999999999999999999887 55443
Q ss_pred eecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9598 808 IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 808 ~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
+.. ..|.|+.=+|--..||+++-|..|+||.-.+.
T Consensus 434 ---gDr-~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 434 ---GDR-HVVNCLEPHPHLPVLASSGIDHDVKIWTPLTA 468 (559)
T ss_pred ---ccc-ceEeccCCCCCCchhhccCCccceeeecCCcc
Confidence 333 38999999999999999999999999986543
No 265
>KOG1334|consensus
Probab=99.68 E-value=2e-16 Score=184.45 Aligned_cols=321 Identities=19% Similarity=0.289 Sum_probs=236.3
Q ss_pred CCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE-eCCCCCEEEEEEeC--CCCEEEEEeCC
Q psy9598 463 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDN--RNILLAAGTVD 539 (1915)
Q Consensus 463 ~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l-~gH~~~I~~Lafsp--dg~~LaSgs~D 539 (1915)
...+.+...|.+|.+.|..|.|...|..|++||.|..|.+||+.++.....+ .||...|..-.|-| +...|++++.|
T Consensus 129 vqr~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~d 208 (559)
T KOG1334|consen 129 VQRLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRD 208 (559)
T ss_pred HHHhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceecccc
Confidence 3456666789999999999999999999999999999999999999887776 58999999888877 35689999999
Q ss_pred CcEEEEECC-CCce--EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCC
Q psy9598 540 KTIRIWNLQ-TLAP--ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 540 gtIrVWDl~-tg~~--~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
|.|++=.+. ++.+ ...+..|.+.|.-++.-|.. ...|++++.|+.+.-+|++.+.....+.... .-..
T Consensus 209 gqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~s---p~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~------~~~~ 279 (559)
T KOG1334|consen 209 GQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDS---PKPFLSCGEDAVVFHIDLRQDVPAEKFVCRE------ADEK 279 (559)
T ss_pred CceeeeeeccccceecceecccccCccceeeecCCC---CCcccccccccceeeeeeccCCccceeeeec------cCCc
Confidence 999998764 3333 34566799999999998865 4889999999999999998875443333110 0001
Q ss_pred CCCceEEEEECCCCc-EEEEEeCCCeEEEEEecCCCCC---ceeEEec------cCCCCeeEEEEcCCCCEEEEEeCCCc
Q psy9598 617 GNAHILCSSFSPGGL-FLATGSGDHHVRVYKMDGVDSP---LGILEVE------EHSDKVDSIQWSHSHLRFVSGSRDGT 686 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~-~Lasgs~Dg~I~IwDl~~~~~~---~~i~~l~------~h~~~V~sl~fspdg~~L~sgs~DG~ 686 (1915)
.....+.++..|... .+++|+.|..+++||.+..... ..+..+. ...-.|++++|++++.-|+++..|-.
T Consensus 280 ~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~ 359 (559)
T KOG1334|consen 280 ERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDED 359 (559)
T ss_pred cceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccc
Confidence 123578889999654 8999999999999998532211 1111111 23346999999999888888889999
Q ss_pred EEEEEccCCceEEeeecccccCCCCc-ccccccccc--ccEEEEEE-CCCCCEEEEEEecCCeEEEEECCCCceEEEeeC
Q psy9598 687 ALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKK--IKVTMVAW-DASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762 (1915)
Q Consensus 687 I~IWDl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~V~~va~-spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g 762 (1915)
|+++.-..+.-. ......+... ......+|. ..|..+-| -|...|+++|+. -|.|.||+-.++++|..+.|
T Consensus 360 IYLF~~~~~~G~----~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSD-CGhIFiW~K~t~eii~~Meg 434 (559)
T KOG1334|consen 360 IYLFNKSMGDGS----EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSD-CGHIFIWDKKTGEIIRFMEG 434 (559)
T ss_pred eEEeccccccCC----CCCCCcchhhccchhhcccccccccceeeeccCccceEEecCc-cceEEEEecchhHHHHHhhc
Confidence 999843222100 0000000000 011122332 33555554 578889999888 99999999999999999998
Q ss_pred CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCc
Q psy9598 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798 (1915)
Q Consensus 763 H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~ 798 (1915)
....|+||.-|| --.+|||.|-|..|+||.-.+..
T Consensus 435 Dr~VVNCLEpHP-~~PvLAsSGid~DVKIWTP~~~e 469 (559)
T KOG1334|consen 435 DRHVVNCLEPHP-HLPVLASSGIDHDVKIWTPLTAE 469 (559)
T ss_pred ccceEeccCCCC-CCchhhccCCccceeeecCCccc
Confidence 888999999999 66789999999999999875443
No 266
>KOG1007|consensus
Probab=99.67 E-value=5.5e-15 Score=162.31 Aligned_cols=279 Identities=20% Similarity=0.263 Sum_probs=199.9
Q ss_pred CCCEEEEEEC----CCcEEEEECCCCc---EEEEEeCCCCCEEEEEEeCCC-CEEEEEeCC-------CcEEEEECCC--
Q psy9598 487 LGEVIVTGAD----DLLIKLWRARDGK---LLATLRGCSGEISDIAIDNRN-ILLAAGTVD-------KTIRIWNLQT-- 549 (1915)
Q Consensus 487 dg~~LaTGs~----Dg~I~IWd~~tg~---~~~~l~gH~~~I~~Lafspdg-~~LaSgs~D-------gtIrVWDl~t-- 549 (1915)
+.-.+++|+. |+.|.+..+..+. ....|..|.+.|..|+-+|-. ++|+++..+ ..+.||.+..
T Consensus 25 d~icFlvgTnslK~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~ 104 (370)
T KOG1007|consen 25 DHICFLVGTNSLKEDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPL 104 (370)
T ss_pred cceEEEEeccccCCcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEeccccc
Confidence 3344555543 5778777766543 234677889999999999954 566665442 2478998853
Q ss_pred -------CceEEEee-cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccc-cceeccCccccccccCCCCCc
Q psy9598 550 -------LAPISVLV-GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI-SKTVFHEPVMFNERIRPGNAH 620 (1915)
Q Consensus 550 -------g~~~~~l~-~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 620 (1915)
..++..+. .+-+.|.||.|.|++ ..|++-. |..|.+|++..+..+ ..+.... ...+...
T Consensus 105 ~~S~~~tlE~v~~Ldteavg~i~cvew~Pns----~klasm~-dn~i~l~~l~ess~~vaev~ss~-------s~e~~~~ 172 (370)
T KOG1007|consen 105 GQSNSSTLECVASLDTEAVGKINCVEWEPNS----DKLASMD-DNNIVLWSLDESSKIVAEVLSSE-------SAEMRHS 172 (370)
T ss_pred CccccchhhHhhcCCHHHhCceeeEEEcCCC----CeeEEec-cCceEEEEcccCcchheeecccc-------cccccce
Confidence 33445554 466799999999943 6777666 788999999887652 1111111 1123456
Q ss_pred eEEEEECC--CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEccCCce
Q psy9598 621 ILCSSFSP--GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-RFVSGSRDGTALIWYYKCSQW 697 (1915)
Q Consensus 621 V~~l~fsp--dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~-~L~sgs~DG~I~IWDl~~~~~ 697 (1915)
.++-+|+| +|+.+++. .|+++..||+++......+ -.+|...|..+.|+|+.. +|++|+.||.|+|||.+..+
T Consensus 173 ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI--~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk- 248 (370)
T KOG1007|consen 173 FTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSI--EDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK- 248 (370)
T ss_pred ecccccCCCCccceEEEe-CCCcEEEEEccchhhhcch--hhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC-
Confidence 77889998 67666664 6789999999754433333 357888999999999876 68899999999999988654
Q ss_pred EEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC-----------------------
Q psy9598 698 RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG----------------------- 754 (1915)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg----------------------- 754 (1915)
.......+|...|++|.|+|....|+.+++.|..|.+|...+-
T Consensus 249 --------------~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer 314 (370)
T KOG1007|consen 249 --------------FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEER 314 (370)
T ss_pred --------------ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHh
Confidence 2234566799999999999986555544444999999975321
Q ss_pred ------ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 755 ------DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 755 ------~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
..+.++..|...|++++|+..+.-+||+-+.||.|.|=.+.
T Consensus 315 ~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 315 VKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred cccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 13456778999999999999888999999999999986653
No 267
>cd05526 Bromo_polybromo_VI Bromodomain, polybromo repeat VI. Polybromo is a nuclear protein of unknown function, which contains 6 bromodomains. The human ortholog BAF180 is part of a SWI/SNF chromatin-remodeling complex, and it may carry out the functions of Yeast Rsc-1 and Rsc-2. It was shown that polybromo bromodomains bind to histone H3 at specific acetyl-lysine positions. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine, but not all the bromodomains in polybromo may bind to acetyl-lysine.
Probab=99.67 E-value=2.2e-16 Score=155.47 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Q psy9598 117 NWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSR 190 (1915)
Q Consensus 117 ~~~~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~ 190 (1915)
.++..+..|+..|++|.+ |.||.+.+. ..|+||.+|++||||.+|++||++|.|.++++|.+||.|||.||+
T Consensus 3 ~vq~~l~~l~~~V~~~~D~~Gr~~s~~f~~LP~--~~~~~~~~ik~Pi~l~~Ik~ki~~~~Y~~ld~~~~D~~lmf~NAr 80 (110)
T cd05526 3 LVQELLATLFVSVMNHQDEEGRCYSDSLAELPE--LAVDGVGPKKIPLTLDIIKRNVDKGRYRRLDKFQEDMFEVLERAR 80 (110)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCchHHHHHCCC--cccCchhhhcCCccHHHHHHHHHcCCcCcHHHHHHHHHHHHHHHH
Confidence 456778899999999875 789999988 447888999999999999999999999999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 191 NYNQNKRSKIYIMTTRLSEFAEEHLRRL 218 (1915)
Q Consensus 191 ~yN~~~~s~i~~~a~~l~~~f~~~~~~~ 218 (1915)
+||.++ |.||.+|..|+++|.+...++
T Consensus 81 ~yN~~~-S~iy~dA~eLq~~f~~~rd~~ 107 (110)
T cd05526 81 RLSRTD-SEIYEDAVELQQFFIKIRDEL 107 (110)
T ss_pred HhCccc-CHHHHHHHHHHHHHHHHHHHH
Confidence 999977 999999999999999887765
No 268
>KOG1007|consensus
Probab=99.67 E-value=9.2e-15 Score=160.59 Aligned_cols=292 Identities=18% Similarity=0.280 Sum_probs=202.2
Q ss_pred CEEEEEe----CCCcEEEEECCCCce---EEEeecCCCCeEEEEeccCccCCCcEEEEEeCC-------CeEEEEecccC
Q psy9598 531 ILLAAGT----VDKTIRIWNLQTLAP---ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD-------GCIGFWKYKLD 596 (1915)
Q Consensus 531 ~~LaSgs----~DgtIrVWDl~tg~~---~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D-------gtI~iWDl~~~ 596 (1915)
-.+++|. .|+.|.+.++..+.. ..+|..|.+.|+.|+-+|. +..+|+++..+ ..+.||.+...
T Consensus 27 icFlvgTnslK~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~---d~~ilaT~yn~~s~s~vl~~aaiw~ipe~ 103 (370)
T KOG1007|consen 27 ICFLVGTNSLKEDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPF---DQRILATVYNDTSDSGVLTGAAIWQIPEP 103 (370)
T ss_pred eEEEEeccccCCcceeEEEEecCccchhhhhhhhcCCcceehhhcCCC---CCceEEEEEeccCCCcceeeEEEEecccc
Confidence 3444454 367788877765332 2356678899999999995 44677776542 24678987654
Q ss_pred ccccceeccCccccccccC-CCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeE---EeccCCCCeeEEEEc
Q psy9598 597 IDISKTVFHEPVMFNERIR-PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGIL---EVEEHSDKVDSIQWS 672 (1915)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~-~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~---~l~~h~~~V~sl~fs 672 (1915)
...... .+......+. .+-+.|.|+.|.|++..|++-. |..|.+|++.......... .-.+|....++-+|+
T Consensus 104 ~~~S~~---~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~Ws 179 (370)
T KOG1007|consen 104 LGQSNS---STLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWS 179 (370)
T ss_pred cCcccc---chhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccC
Confidence 322111 1111111121 2346899999999999888875 7899999996544321111 112356677888898
Q ss_pred C--CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEE
Q psy9598 673 H--SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 750 (1915)
Q Consensus 673 p--dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD 750 (1915)
| +|+.+++ ..|+++..||+++..+.. .....|...|..+.|+|+-.+++++++.||.|+|||
T Consensus 180 pHHdgnqv~t-t~d~tl~~~D~RT~~~~~---------------sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD 243 (370)
T KOG1007|consen 180 PHHDGNQVAT-TSDSTLQFWDLRTMKKNN---------------SIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWD 243 (370)
T ss_pred CCCccceEEE-eCCCcEEEEEccchhhhc---------------chhhhhcceeeeccCCCCceEEEEEcCCCccEEEEe
Confidence 7 5666665 468999999999776332 123457788999999999888777666699999999
Q ss_pred CCC-CceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccc-------------------cceeeee-e-
Q psy9598 751 AFN-GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR-------------------GYKWFHN-I- 808 (1915)
Q Consensus 751 ~~t-g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~-------------------~~~~~~~-~- 808 (1915)
.+. ..++..+.+|...|++|.|+|....+|+|||.|..|.+|...+-... ....+.. .
T Consensus 244 ~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l 323 (370)
T KOG1007|consen 244 TRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQL 323 (370)
T ss_pred ccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccccccccc
Confidence 985 56899999999999999999988899999999999999976442210 0000100 0
Q ss_pred -ecCCCCcceEEEEEcC-CCCEEEEEeCCCeEEEEeCCC
Q psy9598 809 -VEGQGEGALFDGKWSP-DGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 809 -~~~~~~~~V~~vafSp-dg~~Lasg~~dG~I~Iwdl~s 845 (1915)
.-..|...|++++||. |.-.||+-+.||.+.|=.+..
T Consensus 324 ~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 324 ETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred ccccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence 1124567899999987 666788899999998876654
No 269
>KOG1517|consensus
Probab=99.67 E-value=6.4e-15 Score=184.28 Aligned_cols=304 Identities=13% Similarity=0.141 Sum_probs=209.6
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCC---CCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccC
Q psy9598 520 EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ---GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLD 596 (1915)
Q Consensus 520 ~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~---~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~ 596 (1915)
.-..+.|+|=...++++...-.|+|||.+.++.+..|..+. ..|+.+.+.... +..+|++|+.||.|+||+--..
T Consensus 1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~--D~aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQ--DDALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeeccc--chhheeeeccCceEEEeccccc
Confidence 34567788877789988877899999999999887776543 578899887753 6789999999999999964322
Q ss_pred c-cccceecc-CccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEe-ccCCCCeeEEEEc-
Q psy9598 597 I-DISKTVFH-EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV-EEHSDKVDSIQWS- 672 (1915)
Q Consensus 597 ~-~~~~~~~~-~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l-~~h~~~V~sl~fs- 672 (1915)
. ....+... ... .....+..+.-.-+.|.....+|+++|.-..|+|||+.. ...+..+ .+....|+++.-+
T Consensus 1144 ~~~~~eLVTaw~~L--s~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~---E~~~~diP~~s~t~vTaLS~~~ 1218 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSL--SDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHK---EQVVADIPYGSSTLVTALSADL 1218 (1387)
T ss_pred ccCCceeEEeeccc--cccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEeccc---ceeEeecccCCCccceeecccc
Confidence 1 11111110 000 011111111124467777666777777788999999943 2223322 2344567776643
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccccccc--EEEEEECCCCCE-EEEEEecCCeEEEE
Q psy9598 673 HSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK--VTMVAWDASDRW-VITAINFNFQIKIW 749 (1915)
Q Consensus 673 pdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--V~~va~spdg~~-L~t~s~~Dg~I~vw 749 (1915)
+.|+.|++|..||.|++||.+..... ........|... |..+.+.+.|-. |++|+. +|.|++|
T Consensus 1219 ~~gn~i~AGfaDGsvRvyD~R~a~~d-------------s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~-~G~I~~~ 1284 (1387)
T KOG1517|consen 1219 VHGNIIAAGFADGSVRVYDRRMAPPD-------------SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQ-DGDIQLL 1284 (1387)
T ss_pred cCCceEEEeecCCceEEeecccCCcc-------------ccceeecccCCcccceeEEeecCCCcceeeecc-CCeEEEE
Confidence 34789999999999999998865411 111222334444 889999987765 888887 9999999
Q ss_pred ECCCCceEE--EeeCCC--C-CeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 750 DAFNGDLVQ--VLKGHT--N-EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 750 D~~tg~~i~--~l~gH~--~-~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
|++...... ++..|. + .++++.+|+ ...++|+|+. +.|.||++.......++ ....+-++..+.+.|++|+|
T Consensus 1285 DlR~~~~e~~~~iv~~~~yGs~lTal~VH~-hapiiAsGs~-q~ikIy~~~G~~l~~~k-~n~~F~~q~~gs~scL~FHP 1361 (1387)
T KOG1517|consen 1285 DLRMSSKETFLTIVAHWEYGSALTALTVHE-HAPIIASGSA-QLIKIYSLSGEQLNIIK-YNPGFMGQRIGSVSCLAFHP 1361 (1387)
T ss_pred ecccCcccccceeeeccccCccceeeeecc-CCCeeeecCc-ceEEEEecChhhhcccc-cCcccccCcCCCcceeeecc
Confidence 998743222 233443 3 589999999 8899999998 99999999765542222 22334456668899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCc
Q psy9598 825 DGTTCALTDSYGHLLVYGLGGFK 847 (1915)
Q Consensus 825 dg~~Lasg~~dG~I~Iwdl~s~~ 847 (1915)
-.-+||+|..|..|.||......
T Consensus 1362 ~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1362 HRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred hhHhhhhccCCceEEEeecCCcC
Confidence 99999999999999999876543
No 270
>KOG1310|consensus
Probab=99.66 E-value=7.5e-16 Score=180.74 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=178.4
Q ss_pred CceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE-eCCCCCEEEEEEeC--CCCEEEEEeCCC
Q psy9598 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDN--RNILLAAGTVDK 540 (1915)
Q Consensus 464 ~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l-~gH~~~I~~Lafsp--dg~~LaSgs~Dg 540 (1915)
..+.+...|.||++.|+|+.|+.+|.+|++||+|-.|.|||....++++.+ .||.+.|.|+.|-| ++.+++||+.|.
T Consensus 38 rrL~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 38 RRLDLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhcchhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcc
Confidence 345666789999999999999999999999999999999999998988877 59999999999988 467899999999
Q ss_pred cEEEEECCC----------CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcccc
Q psy9598 541 TIRIWNLQT----------LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMF 610 (1915)
Q Consensus 541 tIrVWDl~t----------g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~ 610 (1915)
.|+|+|+.. ...++.+..|...|.-|+..|.+ .+.+.+++.||+|+-+|++.......-. ..+..
T Consensus 118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~---PhtfwsasEDGtirQyDiREph~c~p~~-~~~~~- 192 (758)
T KOG1310|consen 118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNG---PHTFWSASEDGTIRQYDIREPHVCNPDE-DCPSI- 192 (758)
T ss_pred eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCC---CceEEEecCCcceeeecccCCccCCccc-cccHH-
Confidence 999999974 23455677899999999999854 3899999999999999998753221111 00000
Q ss_pred ccccCCCCCceEEEEECCC-CcEEEEEeCCCeEEEEEecCCCCCceeE-E-eccCCCCeeEEE-EcCCCCEEEEEeCCCc
Q psy9598 611 NERIRPGNAHILCSSFSPG-GLFLATGSGDHHVRVYKMDGVDSPLGIL-E-VEEHSDKVDSIQ-WSHSHLRFVSGSRDGT 686 (1915)
Q Consensus 611 ~~~~~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~-~-l~~h~~~V~sl~-fspdg~~L~sgs~DG~ 686 (1915)
.....+.--...|+.++|. ..+|++|+.|-..++||.+.......-. . .........|+. |+|.+. ...+|.
T Consensus 193 l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hl----kn~~gn 268 (758)
T KOG1310|consen 193 LVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHL----KNSQGN 268 (758)
T ss_pred HHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccc----cCcccc
Confidence 0111122245789999996 4689999999999999963211100000 0 000011122222 233321 111221
Q ss_pred EEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEE
Q psy9598 687 ALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758 (1915)
Q Consensus 687 I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~ 758 (1915)
+.. ....++-++|+|+|.-|++.-+ .-.|+++|+..++...
T Consensus 269 ~~~------------------------------~~~~~t~vtfnpNGtElLvs~~-gEhVYlfdvn~~~~~~ 309 (758)
T KOG1310|consen 269 LDR------------------------------YITCCTYVTFNPNGTELLVSWG-GEHVYLFDVNEDKSPT 309 (758)
T ss_pred ccc------------------------------ceeeeEEEEECCCCcEEEEeeC-CeEEEEEeecCCCCce
Confidence 111 1224677899999999888877 6789999987765443
No 271
>KOG0649|consensus
Probab=99.66 E-value=2.9e-14 Score=153.18 Aligned_cols=287 Identities=15% Similarity=0.197 Sum_probs=195.1
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEECCC---------C-ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEE
Q psy9598 520 EISDIAIDNRNILLAAGTVDKTIRIWNLQT---------L-APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 520 ~I~~Lafspdg~~LaSgs~DgtIrVWDl~t---------g-~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~ 589 (1915)
.|.+-+|+|.+++|++|+.+|+|.|..+.+ | ..+...++|.++|+.++|.. .+|++|+. |.|+
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d------~~Lls~gd-G~V~ 84 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD------DFLLSGGD-GLVY 84 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh------hheeeccC-ceEE
Confidence 456678999999999999999999999864 2 24556689999999999985 56777665 9999
Q ss_pred EEecccCccccce----eccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCC
Q psy9598 590 FWKYKLDIDISKT----VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 665 (1915)
Q Consensus 590 iWDl~~~~~~~~~----~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~ 665 (1915)
-|.++........ ....|.... ...--.|+++.+.|..+-|+.++.|+.++-||+ ........+.+|++.
T Consensus 85 gw~W~E~~es~~~K~lwe~~~P~~~~---~~evPeINam~ldP~enSi~~AgGD~~~y~~dl---E~G~i~r~~rGHtDY 158 (325)
T KOG0649|consen 85 GWEWNEEEESLATKRLWEVKIPMQVD---AVEVPEINAMWLDPSENSILFAGGDGVIYQVDL---EDGRIQREYRGHTDY 158 (325)
T ss_pred EeeehhhhhhccchhhhhhcCccccC---cccCCccceeEeccCCCcEEEecCCeEEEEEEe---cCCEEEEEEcCCcce
Confidence 9987654321000 000111100 111245889999998888888889999999999 455667789999999
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe
Q psy9598 666 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745 (1915)
Q Consensus 666 V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~ 745 (1915)
|.++.--.....+++|+.||+++|||+++++++...-... ............|.+++. +..++++|++ ..
T Consensus 159 vH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk------~~~~lRp~~g~wigala~--~edWlvCGgG--p~ 228 (325)
T KOG0649|consen 159 VHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYK------NPNLLRPDWGKWIGALAV--NEDWLVCGGG--PK 228 (325)
T ss_pred eeeeeecccCcceeecCCCccEEEEeccccceeEEecccc------ChhhcCcccCceeEEEec--cCceEEecCC--Cc
Confidence 9999985556679999999999999999998766432111 011111123345666654 5678888764 68
Q ss_pred EEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCC
Q psy9598 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPD 825 (1915)
Q Consensus 746 I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpd 825 (1915)
+.+|++++.++..+|.- ...|..+.|-. ..++++|....|.-|.+.. .. ...+.. .+...++..|+..
T Consensus 229 lslwhLrsse~t~vfpi-pa~v~~v~F~~---d~vl~~G~g~~v~~~~l~G-vl------~a~ip~-~s~~c~s~s~~~~ 296 (325)
T KOG0649|consen 229 LSLWHLRSSESTCVFPI-PARVHLVDFVD---DCVLIGGEGNHVQSYTLNG-VL------QANIPV-ESTACYSASWQTS 296 (325)
T ss_pred eeEEeccCCCceEEEec-ccceeEeeeec---ceEEEeccccceeeeeecc-EE------EEeccC-CccceeeecccCC
Confidence 99999999888877752 34466777743 6788888888999998743 11 111222 2233455555443
Q ss_pred C-CEEEEEeCCCeEEEE
Q psy9598 826 G-TTCALTDSYGHLLVY 841 (1915)
Q Consensus 826 g-~~Lasg~~dG~I~Iw 841 (1915)
. ++|..++....+.|+
T Consensus 297 p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 297 PIKFISIAGFSNKLHIL 313 (325)
T ss_pred ceEEEEecccceeeeee
Confidence 3 344444555556555
No 272
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.64 E-value=2.9e-13 Score=166.94 Aligned_cols=279 Identities=13% Similarity=0.179 Sum_probs=180.0
Q ss_pred EEEECCCcEEEEECCC-Cc--EEEEEeCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECC-CCce--EEEeecCCCCeE
Q psy9598 492 VTGADDLLIKLWRARD-GK--LLATLRGCSGEISDIAIDNRNILLAAGT-VDKTIRIWNLQ-TLAP--ISVLVGHQGIIT 564 (1915)
Q Consensus 492 aTGs~Dg~I~IWd~~t-g~--~~~~l~gH~~~I~~Lafspdg~~LaSgs-~DgtIrVWDl~-tg~~--~~~l~~h~~~V~ 564 (1915)
++...++.|.+|++.+ +. ++.++. +.+....|+++|++++|++++ .++.|.+|++. ++.. +.... ..+...
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~ 83 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPT 83 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCce
Confidence 3446789999999964 43 455554 345678899999999987765 57889999997 3432 22221 334567
Q ss_pred EEEeccCccCCCcEEEEEe-CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEE-EeCCCeE
Q psy9598 565 GVNFCPLEVNGFNYLASTS-TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLAT-GSGDHHV 642 (1915)
Q Consensus 565 sl~fsp~~~~d~~~L~sgs-~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Las-gs~Dg~I 642 (1915)
.|+|+|+ +++|++++ .++.|.+|++.....+...... ..+.....+++|+|+|++|++ ...++.|
T Consensus 84 ~i~~~~~----g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~p~g~~l~v~~~~~~~v 150 (330)
T PRK11028 84 HISTDHQ----GRFLFSASYNANCVSVSPLDKDGIPVAPIQI---------IEGLEGCHSANIDPDNRTLWVPCLKEDRI 150 (330)
T ss_pred EEEECCC----CCEEEEEEcCCCeEEEEEECCCCCCCCceee---------ccCCCcccEeEeCCCCCEEEEeeCCCCEE
Confidence 8999984 46666665 4889999999643221111000 012234677889999988855 4456999
Q ss_pred EEEEecCCCCCce----eEEeccCCCCeeEEEEcCCCCEEEEEeC-CCcEEEEEccC--CceEEeeecccccCCCCcccc
Q psy9598 643 RVYKMDGVDSPLG----ILEVEEHSDKVDSIQWSHSHLRFVSGSR-DGTALIWYYKC--SQWRFIRLDMNTCLPHTKETS 715 (1915)
Q Consensus 643 ~IwDl~~~~~~~~----i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG~I~IWDl~~--~~~~~~~~~~~~~~~~~~~~~ 715 (1915)
.+||+........ ...... ......++|+|+|.+|+++.. +++|.+|++.. +...... ... ..+.
T Consensus 151 ~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~-~~~-~~p~----- 222 (330)
T PRK11028 151 RLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQ-TLD-MMPA----- 222 (330)
T ss_pred EEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEE-EEe-cCCC-----
Confidence 9999954221110 111111 234678899999999988776 89999999973 3322111 110 0000
Q ss_pred ccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCC---CCeEEEEEccCCCCEEEEEec-CceEEE
Q psy9598 716 DETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT---NEVFVLESHPFDSRVLLSAGH-DGLIII 791 (1915)
Q Consensus 716 ~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~---~~V~sl~~sp~dg~~LaSgs~-DG~I~I 791 (1915)
. .........+.|+|+|++|+++...++.|.+|++........+.+|. .....+.++| ++++|++++. +++|.|
T Consensus 223 ~-~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~-dg~~l~va~~~~~~v~v 300 (330)
T PRK11028 223 D-FSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDH-SGKYLIAAGQKSHHISV 300 (330)
T ss_pred c-CCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECC-CCCEEEEEEccCCcEEE
Confidence 0 00112344688999999999987658899999986533222222221 2345789999 8888887765 899999
Q ss_pred EECC
Q psy9598 792 WDIL 795 (1915)
Q Consensus 792 Wdl~ 795 (1915)
|++.
T Consensus 301 ~~~~ 304 (330)
T PRK11028 301 YEID 304 (330)
T ss_pred EEEc
Confidence 9885
No 273
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.63 E-value=2.6e-13 Score=167.35 Aligned_cols=281 Identities=15% Similarity=0.143 Sum_probs=179.7
Q ss_pred EEEEeCCCcEEEEECCC-Cc--eEEEeecCCCCeEEEEeccCccCCCcEEEEE-eCCCeEEEEecccCccccceeccCcc
Q psy9598 533 LAAGTVDKTIRIWNLQT-LA--PISVLVGHQGIITGVNFCPLEVNGFNYLAST-STDGCIGFWKYKLDIDISKTVFHEPV 608 (1915)
Q Consensus 533 LaSgs~DgtIrVWDl~t-g~--~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg-s~DgtI~iWDl~~~~~~~~~~~~~~~ 608 (1915)
+++...++.|.+|++.+ +. .+..+. +.+....++++|+ +++|+++ ..++.|.+|++.....+.... .
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd----~~~lyv~~~~~~~i~~~~~~~~g~l~~~~-~--- 75 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPD----KRHLYVGVRPEFRVLSYRIADDGALTFAA-E--- 75 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCC----CCEEEEEECCCCcEEEEEECCCCceEEee-e---
Confidence 34446789999999964 33 344443 3466788999994 4777665 458889999986321111110 0
Q ss_pred ccccccCCCCCceEEEEECCCCcEEEEEeC-CCeEEEEEecCCCCC-ceeEEeccCCCCeeEEEEcCCCCEEEE-EeCCC
Q psy9598 609 MFNERIRPGNAHILCSSFSPGGLFLATGSG-DHHVRVYKMDGVDSP-LGILEVEEHSDKVDSIQWSHSHLRFVS-GSRDG 685 (1915)
Q Consensus 609 ~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~I~IwDl~~~~~~-~~i~~l~~h~~~V~sl~fspdg~~L~s-gs~DG 685 (1915)
. ...+....++|+|+|++|++++. ++.|.+|++...... ..+..+. +.....+++|+|+|++|++ ...++
T Consensus 76 -----~-~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~ 148 (330)
T PRK11028 76 -----S-PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKED 148 (330)
T ss_pred -----e-cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCC
Confidence 0 01124568999999998887764 889999999532221 1222222 3345677889999998855 45679
Q ss_pred cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC--Cc--eEEEee
Q psy9598 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN--GD--LVQVLK 761 (1915)
Q Consensus 686 ~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t--g~--~i~~l~ 761 (1915)
.|.+||+.+........ .. .. ..........++|+|+|++++++...++.|.+|++.. +. .+..+.
T Consensus 149 ~v~v~d~~~~g~l~~~~------~~---~~-~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~ 218 (330)
T PRK11028 149 RIRLFTLSDDGHLVAQE------PA---EV-TTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLD 218 (330)
T ss_pred EEEEEEECCCCcccccC------CC---ce-ecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEe
Confidence 99999997633110000 00 00 0001233567899999999998887689999999973 33 344443
Q ss_pred CC------CCCeEEEEEccCCCCEEEEEe-cCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeC
Q psy9598 762 GH------TNEVFVLESHPFDSRVLLSAG-HDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS 834 (1915)
Q Consensus 762 gH------~~~V~sl~~sp~dg~~LaSgs-~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~ 834 (1915)
.+ ......+.++| ++++|+++. .+++|.+|++...... +........+ .....++|+|||++|+++..
T Consensus 219 ~~p~~~~~~~~~~~i~~~p-dg~~lyv~~~~~~~I~v~~i~~~~~~-~~~~~~~~~~---~~p~~~~~~~dg~~l~va~~ 293 (330)
T PRK11028 219 MMPADFSDTRWAADIHITP-DGRHLYACDRTASLISVFSVSEDGSV-LSFEGHQPTE---TQPRGFNIDHSGKYLIAAGQ 293 (330)
T ss_pred cCCCcCCCCccceeEEECC-CCCEEEEecCCCCeEEEEEEeCCCCe-EEEeEEEecc---ccCCceEECCCCCEEEEEEc
Confidence 22 11234688999 888888875 4789999999654320 1112211111 24557899999999998875
Q ss_pred -CCeEEEEeCC
Q psy9598 835 -YGHLLVYGLG 844 (1915)
Q Consensus 835 -dG~I~Iwdl~ 844 (1915)
++.|.||.+.
T Consensus 294 ~~~~v~v~~~~ 304 (330)
T PRK11028 294 KSHHISVYEID 304 (330)
T ss_pred cCCcEEEEEEc
Confidence 8899999885
No 274
>KOG4497|consensus
Probab=99.63 E-value=6.6e-15 Score=163.94 Aligned_cols=313 Identities=13% Similarity=0.192 Sum_probs=217.4
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEE-eCCCcEEEEECCCCceEEEeecC
Q psy9598 481 CVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAG-TVDKTIRIWNLQTLAPISVLVGH 559 (1915)
Q Consensus 481 ~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSg-s~DgtIrVWDl~tg~~~~~l~~h 559 (1915)
-++|||+|++||+++.- .+.|-|..|.++.+.+. .-..|..|.|..|.-+++.+ ..++.|.+|++....-...+...
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg 90 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG 90 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC
Confidence 36799999999999876 88899988877655443 24568889999988766655 67889999999988888888888
Q ss_pred CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC
Q psy9598 560 QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 639 (1915)
Q Consensus 560 ~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D 639 (1915)
.+.+.+++|+|++ ..+|.+...+-.|.+|.+.+..+..... ....+..++|+++|++.+..+.-
T Consensus 91 ~agls~~~WSPdg---rhiL~tseF~lriTVWSL~t~~~~~~~~-------------pK~~~kg~~f~~dg~f~ai~sRr 154 (447)
T KOG4497|consen 91 QAGLSSISWSPDG---RHILLTSEFDLRITVWSLNTQKGYLLPH-------------PKTNVKGYAFHPDGQFCAILSRR 154 (447)
T ss_pred CCcceeeeECCCc---ceEeeeecceeEEEEEEeccceeEEecc-------------cccCceeEEECCCCceeeeeecc
Confidence 8999999999953 3777888889999999998775422111 12446889999999998888764
Q ss_pred CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccc
Q psy9598 640 HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN 719 (1915)
Q Consensus 640 g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1915)
...-.+.+........+..+.-.+-..+.|.|+|||..|++ ||---.-.+. ...
T Consensus 155 DCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laV---------wd~~Leykv~-----------------aYe 208 (447)
T KOG4497|consen 155 DCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV---------WDNVLEYKVY-----------------AYE 208 (447)
T ss_pred cHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEE---------ecchhhheee-----------------eee
Confidence 32222222111222223334444556788999999987764 4321110000 011
Q ss_pred ccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceE------------------------------------------
Q psy9598 720 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLV------------------------------------------ 757 (1915)
Q Consensus 720 ~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i------------------------------------------ 757 (1915)
....+..+.|+|.+++|++|+. |+.++|.+--+.+..
T Consensus 209 ~~lG~k~v~wsP~~qflavGsy-D~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~ 287 (447)
T KOG4497|consen 209 RGLGLKFVEWSPCNQFLAVGSY-DQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAH 287 (447)
T ss_pred eccceeEEEeccccceEEeecc-chhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccC
Confidence 2346788999999999999998 998888664322111
Q ss_pred ------------------EEee------CCCCCeEEEEEccCCCCEEEEEec--CceEEEEECCCCccccceeeeeeecC
Q psy9598 758 ------------------QVLK------GHTNEVFVLESHPFDSRVLLSAGH--DGLIIIWDILSSKQRGYKWFHNIVEG 811 (1915)
Q Consensus 758 ------------------~~l~------gH~~~V~sl~~sp~dg~~LaSgs~--DG~I~IWdl~s~~~~~~~~~~~~~~~ 811 (1915)
+.++ ...-.+.-++|++ |..+++|-.. -..+-|||+...+. ...+.
T Consensus 288 ~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~-Ds~y~aTrnd~~PnalW~Wdlq~l~l--~avLi----- 359 (447)
T KOG4497|consen 288 IWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSC-DSTYAATRNDKYPNALWLWDLQNLKL--HAVLI----- 359 (447)
T ss_pred ccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecC-CceEEeeecCCCCceEEEEechhhhh--hhhhh-----
Confidence 0111 0112356688999 8888888754 36799999987665 22221
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy9598 812 QGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFK 847 (1915)
Q Consensus 812 ~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~ 847 (1915)
...+|....|+|....|+.+....++++|......
T Consensus 360 -Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~ 394 (447)
T KOG4497|consen 360 -QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPR 394 (447)
T ss_pred -hccceeEEEeCCCCceEEEEcCCceEEEEcCCCce
Confidence 34679999999999999998888899999887643
No 275
>KOG0303|consensus
Probab=99.62 E-value=2.8e-14 Score=162.82 Aligned_cols=229 Identities=19% Similarity=0.230 Sum_probs=172.1
Q ss_pred EEeCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCC-------ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC
Q psy9598 513 TLRGCSGEISDIAIDN-RNILLAAGTVDKTIRIWNLQTL-------APISVLVGHQGIITGVNFCPLEVNGFNYLASTST 584 (1915)
Q Consensus 513 ~l~gH~~~I~~Lafsp-dg~~LaSgs~DgtIrVWDl~tg-------~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~ 584 (1915)
.+.||+++|..++|+| +...|||||.|.+|.||.+-.+ .++..|.||...|.-|+|+|.. .+.|++++.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA---~NVLlsag~ 152 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTA---PNVLLSAGS 152 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccc---hhhHhhccC
Confidence 4579999999999999 4568999999999999998543 4578899999999999999965 589999999
Q ss_pred CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCC
Q psy9598 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD 664 (1915)
Q Consensus 585 DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~ 664 (1915)
|.+|.+|++.++..+..+ .|...|++++|+.+|.+|++++.|..|+|||.+. ...+..-.+|.+
T Consensus 153 Dn~v~iWnv~tgeali~l-------------~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~---~~~v~e~~~heG 216 (472)
T KOG0303|consen 153 DNTVSIWNVGTGEALITL-------------DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR---GTVVSEGVAHEG 216 (472)
T ss_pred CceEEEEeccCCceeeec-------------CCCCeEEEEEeccCCceeeeecccceeEEEcCCC---CcEeeecccccC
Confidence 999999999999754332 2668899999999999999999999999999843 344555566765
Q ss_pred C-eeEEEEcCCCCEEEEEe---CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEE
Q psy9598 665 K-VDSIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 740 (1915)
Q Consensus 665 ~-V~sl~fspdg~~L~sgs---~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s 740 (1915)
. -..+.|-.+|..+-+|. .+..+-|||....+.- ...........|..--|+++...|+.++
T Consensus 217 ~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP--------------~~~~elDtSnGvl~PFyD~dt~ivYl~G 282 (472)
T KOG0303|consen 217 AKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEP--------------IALQELDTSNGVLLPFYDPDTSIVYLCG 282 (472)
T ss_pred CCcceeEEeccCceeeeccccccccceeccCcccccCc--------------ceeEEeccCCceEEeeecCCCCEEEEEe
Confidence 3 33445777888555553 5678999987654311 1112223456677778899999999988
Q ss_pred ecCCeEEEEECCCCce-EEEeeC--CCCCeEEEEEcc
Q psy9598 741 NFNFQIKIWDAFNGDL-VQVLKG--HTNEVFVLESHP 774 (1915)
Q Consensus 741 ~~Dg~I~vwD~~tg~~-i~~l~g--H~~~V~sl~~sp 774 (1915)
-.|+.|+.|.+....+ ++-|.. ...+-..+.|-|
T Consensus 283 KGD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~mP 319 (472)
T KOG0303|consen 283 KGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMP 319 (472)
T ss_pred cCCcceEEEEecCCCceeEEecccccCCccccccccc
Confidence 8899999999876542 333321 122344555555
No 276
>KOG1524|consensus
Probab=99.61 E-value=2e-14 Score=168.58 Aligned_cols=269 Identities=17% Similarity=0.245 Sum_probs=184.8
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeE-EEEeccC---ccCCCcEEEEEeCCCeEEEE
Q psy9598 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIIT-GVNFCPL---EVNGFNYLASTSTDGCIGFW 591 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~-sl~fsp~---~~~d~~~L~sgs~DgtI~iW 591 (1915)
.|...|.|+.|+.....+++++ |..+.+|.--+...+..+.-....|. .+..-+- +-.....|+.++.||.+.+.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~d-Dh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSD-DHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEecc-CceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 4666778999988877666665 55555554433222222221111111 1111111 11245689999999999887
Q ss_pred ecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEE
Q psy9598 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQW 671 (1915)
Q Consensus 592 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~f 671 (1915)
+-... ......+|.+.+.|..|+|+|.-|+++|.||.|++|.-.+ ..-.++.....+|.|++|
T Consensus 91 ~k~~r-------------VE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG----MLRStl~Q~~~~v~c~~W 153 (737)
T KOG1524|consen 91 NKSAR-------------VERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG----MLRSTVVQNEESIRCARW 153 (737)
T ss_pred cccch-------------hhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc----hHHHHHhhcCceeEEEEE
Confidence 53221 1122346788999999999999999999999999998632 222233446678999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEEC
Q psy9598 672 SHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA 751 (1915)
Q Consensus 672 spdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~ 751 (1915)
.|+.+.++-|-. |.+.|=-+... ........|.+-|.++.|++....|++|+. |...+|||.
T Consensus 154 ~p~S~~vl~c~g-~h~~IKpL~~n----------------~k~i~WkAHDGiiL~~~W~~~s~lI~sgGE-D~kfKvWD~ 215 (737)
T KOG1524|consen 154 APNSNSIVFCQG-GHISIKPLAAN----------------SKIIRWRAHDGLVLSLSWSTQSNIIASGGE-DFRFKIWDA 215 (737)
T ss_pred CCCCCceEEecC-CeEEEeecccc----------------cceeEEeccCcEEEEeecCccccceeecCC-ceeEEeecc
Confidence 999876655433 33444322221 122334568899999999999999999998 999999997
Q ss_pred CCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEE
Q psy9598 752 FNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCAL 831 (1915)
Q Consensus 752 ~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Las 831 (1915)
.|..+..-..|..+|++++|+| + ..++.|+.. ++++ .....|.|+.++||+||..+++
T Consensus 216 -~G~~Lf~S~~~ey~ITSva~np-d-~~~~v~S~n-t~R~------------------~~p~~GSifnlsWS~DGTQ~a~ 273 (737)
T KOG1524|consen 216 -QGANLFTSAAEEYAITSVAFNP-E-KDYLLWSYN-TARF------------------SSPRVGSIFNLSWSADGTQATC 273 (737)
T ss_pred -cCcccccCChhccceeeeeecc-c-cceeeeeee-eeee------------------cCCCccceEEEEEcCCCceeec
Confidence 4777888889999999999999 5 666666644 4441 1234578999999999999999
Q ss_pred EeCCCeEEEEe
Q psy9598 832 TDSYGHLLVYG 842 (1915)
Q Consensus 832 g~~dG~I~Iwd 842 (1915)
|+..|++.+=.
T Consensus 274 gt~~G~v~~A~ 284 (737)
T KOG1524|consen 274 GTSTGQLIVAY 284 (737)
T ss_pred cccCceEEEee
Confidence 99999986543
No 277
>KOG1523|consensus
Probab=99.59 E-value=1.4e-13 Score=154.04 Aligned_cols=209 Identities=17% Similarity=0.203 Sum_probs=170.1
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC---cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC---
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG---KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--- 549 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg---~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t--- 549 (1915)
..+|+|.+|++|+..+|++.....|.||..... +..+++..|...|++|.|+|..+.|++|+.|..-+||....
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 479999999999999999999999999987654 47889999999999999999999999999999999999833
Q ss_pred CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC
Q psy9598 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629 (1915)
Q Consensus 550 g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd 629 (1915)
.++...|..|...+++|.|+|.. +.|++||....|.||-+.......... ..-.++...|+|++|+|+
T Consensus 90 WkptlvLlRiNrAAt~V~WsP~e----nkFAVgSgar~isVcy~E~ENdWWVsK--------hikkPirStv~sldWhpn 157 (361)
T KOG1523|consen 90 WKPTLVLLRINRAATCVKWSPKE----NKFAVGSGARLISVCYYEQENDWWVSK--------HIKKPIRSTVTSLDWHPN 157 (361)
T ss_pred eccceeEEEeccceeeEeecCcC----ceEEeccCccEEEEEEEecccceehhh--------hhCCccccceeeeeccCC
Confidence 45667778899999999999955 899999999999999776553221110 111245588999999999
Q ss_pred CcEEEEEeCCCeEEEEEec-----CCC----------CCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy9598 630 GLFLATGSGDHHVRVYKMD-----GVD----------SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 694 (1915)
Q Consensus 630 g~~Lasgs~Dg~I~IwDl~-----~~~----------~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~ 694 (1915)
+-+|++|+.|+..+||..- ... -...+..+....+.|..+.|+|+|..|+-.+.|+++.+-|...
T Consensus 158 nVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~ 237 (361)
T KOG1523|consen 158 NVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAG 237 (361)
T ss_pred cceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCC
Confidence 9999999999999999752 100 0112223335668899999999999999999999999988765
Q ss_pred Cc
Q psy9598 695 SQ 696 (1915)
Q Consensus 695 ~~ 696 (1915)
..
T Consensus 238 p~ 239 (361)
T KOG1523|consen 238 PS 239 (361)
T ss_pred Cc
Confidence 53
No 278
>KOG0290|consensus
Probab=99.57 E-value=2.2e-13 Score=150.20 Aligned_cols=247 Identities=18% Similarity=0.348 Sum_probs=178.9
Q ss_pred cCCCCcEEEEEEcCCC-----CEEEEEECCCcEEEEECCC--Cc--EEEEE-----eCCCCCEEEEEEeC-CCCEEEEEe
Q psy9598 473 LGHLSAVFCVLFDKLG-----EVIVTGADDLLIKLWRARD--GK--LLATL-----RGCSGEISDIAIDN-RNILLAAGT 537 (1915)
Q Consensus 473 ~gH~~~V~~vafspdg-----~~LaTGs~Dg~I~IWd~~t--g~--~~~~l-----~gH~~~I~~Lafsp-dg~~LaSgs 537 (1915)
..|..+++.+.|.|+. .+|||.+ | .++||.+.. .. +...| ..+.+++++..|+. +-++|.++|
T Consensus 93 fd~~YP~tK~~wiPd~~g~~pdlLATs~-D-~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS 170 (364)
T KOG0290|consen 93 FDHPYPVTKLMWIPDSKGVYPDLLATSS-D-FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS 170 (364)
T ss_pred CCCCCCccceEecCCccccCcchhhccc-C-eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec
Confidence 4799999999999876 4566654 3 799999873 22 11222 24577899999986 677999999
Q ss_pred CCCcEEEEECCCCce---EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcccccccc
Q psy9598 538 VDKTIRIWNLQTLAP---ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERI 614 (1915)
Q Consensus 538 ~DgtIrVWDl~tg~~---~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~ 614 (1915)
-|-+..|||++++.. ...|-.|...|..|+|.. ++.+.|+++|.||+|++||++...-. ++....+.
T Consensus 171 iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~---~s~~~FASvgaDGSvRmFDLR~leHS-TIIYE~p~------ 240 (364)
T KOG0290|consen 171 IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLK---GSRDVFASVGADGSVRMFDLRSLEHS-TIIYEDPS------ 240 (364)
T ss_pred ccCeEEEEEEeeccccceeeEEEecCcceeEEEecc---CccceEEEecCCCcEEEEEecccccc-eEEecCCC------
Confidence 999999999998643 566789999999999997 35689999999999999999875421 22222111
Q ss_pred CCCCCceEEEEECCC-CcEEEEEeCC-CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEE
Q psy9598 615 RPGNAHILCSSFSPG-GLFLATGSGD-HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWY 691 (1915)
Q Consensus 615 ~~~~~~V~~l~fspd-g~~Lasgs~D-g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWD 691 (1915)
.......++|++. -+++|+-..| ..|.|.|++.. ...+..+.+|.+.|++|+|.|.. ..|++|+.|..+.|||
T Consensus 241 --~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P--~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWD 316 (364)
T KOG0290|consen 241 --PSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVP--CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWD 316 (364)
T ss_pred --CCCcceeeccCcCCchHHhhhhcCCceEEEEEecCC--CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEe
Confidence 1366788999885 4566665444 47999999643 34567889999999999999864 5899999999999999
Q ss_pred ccCCceEEeeecccccCCCCccccccccccccEEEEEECCC-CCEEEEEEecCCeEEE
Q psy9598 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDAS-DRWVITAINFNFQIKI 748 (1915)
Q Consensus 692 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spd-g~~L~t~s~~Dg~I~v 748 (1915)
+...-. .+..... ......+.|+.+.|++. ..+|+++. +..+.+
T Consensus 317 l~q~~~----------~~~~dPi-lay~a~~EVNqi~Ws~~~~Dwiai~~--~kklei 361 (364)
T KOG0290|consen 317 LQQMPR----------ENGEDPI-LAYTAGGEVNQIQWSSSQPDWIAICF--GKKLEI 361 (364)
T ss_pred cccccc----------cCCCCch-hhhhccceeeeeeecccCCCEEEEEe--cCeeeE
Confidence 976431 0111111 12226788999999964 55666554 344443
No 279
>KOG1245|consensus
Probab=99.57 E-value=1.6e-15 Score=207.23 Aligned_cols=96 Identities=39% Similarity=0.622 Sum_probs=92.4
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCHHH
Q psy9598 122 CREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 201 (1915)
Q Consensus 122 ~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s~i~ 201 (1915)
|..||.+|+.|..+|||++||+...+||||+|||+||||+||+.|+..|.|.++++|..||.|||.||.+||. . |.|+
T Consensus 1306 ~e~il~e~~~~~~awPFlepVn~~~vp~Y~~IIk~Pmdl~tir~k~~~~~Y~~~eef~~Di~lvf~Nc~~yN~-~-s~i~ 1383 (1404)
T KOG1245|consen 1306 CEDILHELVVHKAAWPFLEPVNPKEVPDYYDIIKKPMDLSTIREKLSKGIYPSPEEFATDIELVFDNCETYNE-D-SEIG 1383 (1404)
T ss_pred HHHHHHHHHHhhhcchhhccCChhhcccHHHHhcChhHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHhcc-c-hhhh
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999 4 8999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy9598 202 IMTTRLSEFAEEHLRRLT 219 (1915)
Q Consensus 202 ~~a~~l~~~f~~~~~~~~ 219 (1915)
..+..|.++|++.|....
T Consensus 1384 ~ag~~l~~ff~~~~~~~~ 1401 (1404)
T KOG1245|consen 1384 RAGTCLRRFFHKRWRKKF 1401 (1404)
T ss_pred hhcchHHHHHHHHHHhhc
Confidence 999999999999776543
No 280
>KOG1524|consensus
Probab=99.57 E-value=1.1e-13 Score=162.42 Aligned_cols=265 Identities=17% Similarity=0.224 Sum_probs=184.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCE-EEEEEeC-------CCCEEEEEeCCCcEEEE
Q psy9598 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI-SDIAIDN-------RNILLAAGTVDKTIRIW 545 (1915)
Q Consensus 474 gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I-~~Lafsp-------dg~~LaSgs~DgtIrVW 545 (1915)
-|..-|.||.|+.+...+++++++ .+.+|+-.+......+.-...-| +.+..-+ ....|+.++.||.+.|.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh-~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDH-QIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEeccCc-eEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 466677899999887777766555 55555433332222221111111 1111111 23467888889999988
Q ss_pred ECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEE
Q psy9598 546 NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625 (1915)
Q Consensus 546 Dl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 625 (1915)
+ ..++.-..+..|.+.|.|-.|+|+ |.-|++++.||.|++|.-...-. .. +......|+|++
T Consensus 91 ~-k~~rVE~sv~AH~~A~~~gRW~~d----GtgLlt~GEDG~iKiWSrsGMLR--St-----------l~Q~~~~v~c~~ 152 (737)
T KOG1524|consen 91 N-KSARVERSISAHAAAISSGRWSPD----GAGLLTAGEDGVIKIWSRSGMLR--ST-----------VVQNEESIRCAR 152 (737)
T ss_pred c-ccchhhhhhhhhhhhhhhcccCCC----CceeeeecCCceEEEEeccchHH--HH-----------HhhcCceeEEEE
Confidence 7 446777788899999999999994 58999999999999997543321 11 111236799999
Q ss_pred ECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeeccc
Q psy9598 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705 (1915)
Q Consensus 626 fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~ 705 (1915)
|.|+...++.+.. +.+.|=.+ .....+....+|.+-|.++.|++..+++++|+.|-..+|||-.....
T Consensus 153 W~p~S~~vl~c~g-~h~~IKpL---~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~L-------- 220 (737)
T KOG1524|consen 153 WAPNSNSIVFCQG-GHISIKPL---AANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANL-------- 220 (737)
T ss_pred ECCCCCceEEecC-CeEEEeec---ccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCccc--------
Confidence 9999877666544 34555555 33455677899999999999999999999999999999999764331
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEec
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 785 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~ 785 (1915)
.....|..+|++++|.|+ ..++.++. +++++ -....+.|..++|++ ||..+++|..
T Consensus 221 ---------f~S~~~ey~ITSva~npd-~~~~v~S~--nt~R~-----------~~p~~GSifnlsWS~-DGTQ~a~gt~ 276 (737)
T KOG1524|consen 221 ---------FTSAAEEYAITSVAFNPE-KDYLLWSY--NTARF-----------SSPRVGSIFNLSWSA-DGTQATCGTS 276 (737)
T ss_pred ---------ccCChhccceeeeeeccc-cceeeeee--eeeee-----------cCCCccceEEEEEcC-CCceeecccc
Confidence 223457889999999999 44444442 33441 124557899999999 9999999999
Q ss_pred CceEEEEE
Q psy9598 786 DGLIIIWD 793 (1915)
Q Consensus 786 DG~I~IWd 793 (1915)
.|.|.+=-
T Consensus 277 ~G~v~~A~ 284 (737)
T KOG1524|consen 277 TGQLIVAY 284 (737)
T ss_pred CceEEEee
Confidence 99876643
No 281
>KOG0771|consensus
Probab=99.57 E-value=3.1e-13 Score=157.28 Aligned_cols=198 Identities=21% Similarity=0.209 Sum_probs=148.0
Q ss_pred EEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEee
Q psy9598 622 LCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 701 (1915)
Q Consensus 622 ~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~ 701 (1915)
.+++|+.+|..|++|+.||++|||++ .....+.....|...|.++.|+|||.+|++-+.| ..+||+..++..+...
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~---Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~ 223 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEW---PSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARK 223 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEec---CcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhc
Confidence 78999999999999999999999997 3344566678899999999999999999999999 9999999988532211
Q ss_pred ecccccCCCCccccccccccccEEEEEECCCC---CEEEEEE-ecCCeEEEEECCCCc------eEEEeeCCCCCeEEEE
Q psy9598 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASD---RWVITAI-NFNFQIKIWDAFNGD------LVQVLKGHTNEVFVLE 771 (1915)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg---~~L~t~s-~~Dg~I~vwD~~tg~------~i~~l~gH~~~V~sl~ 771 (1915)
. .......+..+.|+.++ .+.+++. ...+.|..|++.... ....+..+ ..|++++
T Consensus 224 t--------------~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~-~siSsl~ 288 (398)
T KOG0771|consen 224 T--------------PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRF-KSISSLA 288 (398)
T ss_pred C--------------CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhcc-CcceeEE
Confidence 1 01233345556677665 3333322 224556666654321 11122223 3699999
Q ss_pred EccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 772 SHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 772 ~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
++. +|++++.|+.||.|-|++..+.+. +..+ ...|.+.|+.+.|+||.+++++.+.+....|..+.-
T Consensus 289 VS~-dGkf~AlGT~dGsVai~~~~~lq~--~~~v----k~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 289 VSD-DGKFLALGTMDGSVAIYDAKSLQR--LQYV----KEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EcC-CCcEEEEeccCCcEEEEEeceeee--eEee----hhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 999 999999999999999999988665 3333 345668999999999999999999998888887764
No 282
>KOG2110|consensus
Probab=99.56 E-value=1.7e-12 Score=148.22 Aligned_cols=323 Identities=11% Similarity=0.086 Sum_probs=210.8
Q ss_pred CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC--CcEEEEECCCCce
Q psy9598 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD--KTIRIWNLQTLAP 552 (1915)
Q Consensus 475 H~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D--gtIrVWDl~tg~~ 552 (1915)
....+..+.|..+...|..|+.|| -++|+................|.-+-|+.. +||..+.+ ..++|.++..+..
T Consensus 4 ~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk~~~ 80 (391)
T KOG2110|consen 4 KKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKKKTT 80 (391)
T ss_pred CCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcccCce
Confidence 345677888999999999999997 578887665443322223345666667655 66655554 3589999888777
Q ss_pred EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 553 ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 553 ~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
+..+. ....|.+|.++- +.|+++-.+. |.|||+.+...+.++... .++...+.+++++..+.+
T Consensus 81 ICe~~-fpt~IL~VrmNr------~RLvV~Lee~-IyIydI~~MklLhTI~t~---------~~n~~gl~AlS~n~~n~y 143 (391)
T KOG2110|consen 81 ICEIF-FPTSILAVRMNR------KRLVVCLEES-IYIYDIKDMKLLHTIETT---------PPNPKGLCALSPNNANCY 143 (391)
T ss_pred EEEEe-cCCceEEEEEcc------ceEEEEEccc-EEEEecccceeehhhhcc---------CCCccceEeeccCCCCce
Confidence 76664 456789999976 5666666554 999999998766555433 133355777778877878
Q ss_pred EEEEe--CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCc-EEEEEccCCceEEeeecccccCC
Q psy9598 633 LATGS--GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT-ALIWYYKCSQWRFIRLDMNTCLP 709 (1915)
Q Consensus 633 Lasgs--~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~-I~IWDl~~~~~~~~~~~~~~~~~ 709 (1915)
|+.-+ ..|.|.|||+ .....+..+..|.+.+.+|+|+++|.+|||+|..|+ ||||.+..++....+..
T Consensus 144 lAyp~s~t~GdV~l~d~---~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRR------ 214 (391)
T KOG2110|consen 144 LAYPGSTTSGDVVLFDT---INLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRR------ 214 (391)
T ss_pred EEecCCCCCceEEEEEc---ccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeC------
Confidence 88633 3689999999 445667778899999999999999999999999998 68999988886543210
Q ss_pred CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceE
Q psy9598 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 789 (1915)
Q Consensus 710 ~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I 789 (1915)
......|.+++|++++.+|+++++ .++|+||.+.... ......+-....|...-...+.+---.+.-
T Consensus 215 --------G~~~~~IySL~Fs~ds~~L~~sS~-TeTVHiFKL~~~~----~~~~~~p~~~~~~~~~~sk~~~sylps~V~ 281 (391)
T KOG2110|consen 215 --------GTYPVSIYSLSFSPDSQFLAASSN-TETVHIFKLEKVS----NNPPESPTAGTSWFGKVSKAATSYLPSQVS 281 (391)
T ss_pred --------CceeeEEEEEEECCCCCeEEEecC-CCeEEEEEecccc----cCCCCCCCCCCcccchhhhhhhhhcchhhh
Confidence 112457899999999999999998 9999999986533 111111100000100000000000001122
Q ss_pred EEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 790 IIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 790 ~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
.+|+.... ..... +...+...+..+.-.+...++.+++.||+++.|.+..
T Consensus 282 ~~~~~~R~----FAt~~--l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~ 331 (391)
T KOG2110|consen 282 SVLDQSRK----FATAK--LPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPP 331 (391)
T ss_pred hhhhhccc----eeEEE--ccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCC
Confidence 23554221 11111 1112222333333335788999999999999999874
No 283
>KOG1523|consensus
Probab=99.56 E-value=2.7e-13 Score=151.85 Aligned_cols=256 Identities=18% Similarity=0.203 Sum_probs=185.4
Q ss_pred EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC---ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEE
Q psy9598 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL---APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590 (1915)
Q Consensus 514 l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg---~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~i 590 (1915)
+..-..+|+|.+|++|++.+|.+.....|.||..... +..+++..|...|++|.|+|.. +.|++|+.|..-.+
T Consensus 6 ~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~s----nrIvtcs~drnayV 81 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKS----NRIVTCSHDRNAYV 81 (361)
T ss_pred eeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCC----CceeEccCCCCccc
Confidence 3334678999999999999999999999999988654 4688999999999999999955 89999999999999
Q ss_pred EecccC-ccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCC-ceeEEeccCCCCeeE
Q psy9598 591 WKYKLD-IDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP-LGILEVEEHSDKVDS 668 (1915)
Q Consensus 591 WDl~~~-~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~-~~i~~l~~h~~~V~s 668 (1915)
|....+ .-...+. +..++..++|+.|+|.++.||+|+.-..|.||.+...... ..-+.-..+.+.|.+
T Consensus 82 w~~~~~~~Wkptlv----------LlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~s 151 (361)
T KOG1523|consen 82 WTQPSGGTWKPTLV----------LLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTS 151 (361)
T ss_pred cccCCCCeecccee----------EEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceee
Confidence 988433 2222222 2234578999999999999999999999999998544332 111223457788999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCCc--eEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeE
Q psy9598 669 IQWSHSHLRFVSGSRDGTALIWYYKCSQ--WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQI 746 (1915)
Q Consensus 669 l~fspdg~~L~sgs~DG~I~IWDl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I 746 (1915)
+.|+|++-+|++||.|+.++||..--.. .......-...++............+.|..+.|+|+|..|+-.+. |..+
T Consensus 152 ldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~H-ds~v 230 (361)
T KOG1523|consen 152 LDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGH-DSTV 230 (361)
T ss_pred eeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecC-CCce
Confidence 9999999999999999999999642111 000000011112222233333466789999999999999999998 9999
Q ss_pred EEEECCCCc-eEEEeeCCCCCeEEEEEccCCCCEEEEEecC
Q psy9598 747 KIWDAFNGD-LVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 747 ~vwD~~tg~-~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D 786 (1915)
.+-|..... .+..+....-+..++.|-. ...++.+|.|
T Consensus 231 ~~~da~~p~~~v~~~~~~~lP~ls~~~is--e~~vv~ag~~ 269 (361)
T KOG1523|consen 231 SFVDAAGPSERVQSVATAQLPLLSVSWIS--ENSVVAAGYD 269 (361)
T ss_pred EEeecCCCchhccchhhccCCceeeEeec--CCceeecCCC
Confidence 999986653 3333333335666776654 3445555555
No 284
>KOG1472|consensus
Probab=99.56 E-value=8.9e-15 Score=183.85 Aligned_cols=107 Identities=34% Similarity=0.523 Sum_probs=99.7
Q ss_pred chhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcC
Q psy9598 115 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194 (1915)
Q Consensus 115 ~~~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~ 194 (1915)
+..+......+|..|..|.++|||++||+..++||||.+|++||||.||+.+|..++|..+..|..|+.+||+||+.||+
T Consensus 604 ~~~~~s~~~~il~~l~~h~~awPf~~Pv~~~e~pdyy~~I~~pmDl~tM~~~l~~~~y~~~~~f~ad~~~vf~ncr~yn~ 683 (720)
T KOG1472|consen 604 PGKLFSAIQNILDQLQNHGDAWPFLKPVNKKEVPDYYDVIKHPMDLRTMQNRLKDNQYTEVELFMADVVRVFANCRMYNG 683 (720)
T ss_pred cchhhHHHHhHHhhhhcCCccCCccCccccccCCcHHHHhcccccHHHHhhhccccchhhHHHHHHHHHHHHhhhhccCC
Confidence 34455678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9598 195 NKRSKIYIMTTRLSEFAEEHLRRLTVRW 222 (1915)
Q Consensus 195 ~~~s~i~~~a~~l~~~f~~~~~~~~~~~ 222 (1915)
.. +..|+.|..|+.+|..+++......
T Consensus 684 ~~-~~y~k~~~~le~~~~~k~~~~i~~~ 710 (720)
T KOG1472|consen 684 SD-TQYYKCAQALEKFFLFKLNELILRV 710 (720)
T ss_pred cc-chheecccchhhhhcchhhhhhhhh
Confidence 65 9999999999999999998876654
No 285
>KOG0644|consensus
Probab=99.54 E-value=1.5e-14 Score=177.09 Aligned_cols=272 Identities=16% Similarity=0.222 Sum_probs=194.7
Q ss_pred EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEE
Q psy9598 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~ 589 (1915)
.+..|.||.+.|.|+.|...|.++++|+.|..|+||...++.+++...||.+.|+.++.+.. ..+++++|.|..|+
T Consensus 182 ~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~----n~~iaaaS~D~vIr 257 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSN----NTMIAAASNDKVIR 257 (1113)
T ss_pred HHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchh----hhhhhhcccCceEE
Confidence 44567799999999999999999999999999999999999999999999999998887652 24455555555555
Q ss_pred EEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEE
Q psy9598 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSI 669 (1915)
Q Consensus 590 iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl 669 (1915)
+|.+.. ...+..+.+|++.|++|
T Consensus 258 vWrl~~---------------------------------------------------------~~pvsvLrghtgavtai 280 (1113)
T KOG0644|consen 258 VWRLPD---------------------------------------------------------GAPVSVLRGHTGAVTAI 280 (1113)
T ss_pred EEecCC---------------------------------------------------------CchHHHHhccccceeee
Confidence 554332 23344567899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEE
Q psy9598 670 QWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIW 749 (1915)
Q Consensus 670 ~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vw 749 (1915)
+|+|-. +.+.||++++||.+-.-... .+. .........+.++.|...+..+++++. |+.-..|
T Consensus 281 afsP~~----sss~dgt~~~wd~r~~~~~y--------~pr----p~~~~~~~~~~s~~~~~~~~~f~Tgs~-d~ea~n~ 343 (1113)
T KOG0644|consen 281 AFSPRA----SSSDDGTCRIWDARLEPRIY--------VPR----PLKFTEKDLVDSILFENNGDRFLTGSR-DGEARNH 343 (1113)
T ss_pred ccCccc----cCCCCCceEecccccccccc--------CCC----CCCcccccceeeeeccccccccccccC-Ccccccc
Confidence 999864 78899999999987111010 000 011122356777888888888888887 8887777
Q ss_pred ECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCC-CCE
Q psy9598 750 DAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPD-GTT 828 (1915)
Q Consensus 750 D~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpd-g~~ 828 (1915)
.+.. +..|...+.-+.++.....+.+++-.+..+++|++.+|.. +..+ ..+...++.+.++|- ...
T Consensus 344 e~~~------l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l--~H~l-----~ghsd~~yvLd~Hpfn~ri 410 (1113)
T KOG0644|consen 344 EFEQ------LAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQL--LHNL-----MGHSDEVYVLDVHPFNPRI 410 (1113)
T ss_pred hhhH------hhhhccceEEEeccccccccceeeeeeeEeeeeecccchh--hhhh-----cccccceeeeeecCCCcHh
Confidence 6532 2233333333333332345777888899999999999877 3333 356678899999994 455
Q ss_pred EEEEeCCCeEEEEeCCCCcccccC--CC----ceeecCCCCeee-ecCCCc
Q psy9598 829 CALTDSYGHLLVYGLGGFKRPQNI--PR----ELFFHTDYRTLN-RPNGLF 872 (1915)
Q Consensus 829 Lasg~~dG~I~Iwdl~s~~~~~~l--~~----~~~F~~d~~~Lv-~~~~~~ 872 (1915)
..+++.||...|||+..|.+++.. +. .-.|++||..++ .+..+.
T Consensus 411 ~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgq 461 (1113)
T KOG0644|consen 411 AMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQ 461 (1113)
T ss_pred hhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCc
Confidence 668899999999999988765432 21 467999998776 555554
No 286
>KOG0649|consensus
Probab=99.54 E-value=3.4e-13 Score=145.11 Aligned_cols=231 Identities=15% Similarity=0.178 Sum_probs=162.8
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEecCC-------CCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy9598 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGV-------DSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYY 692 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~-------~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl 692 (1915)
.|..-+++|.+++|++|..+|.|.++.+... .....+....+|.++|+.++|+ ..+|++|+ ||.|+-|..
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence 4566689999999999999999999998532 2234555668999999999998 33566655 599999976
Q ss_pred cCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEE
Q psy9598 693 KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772 (1915)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~ 772 (1915)
+....... .................-..|+++.+.|...-|+++++ |+.++.||+.+|+...+++||++.|.++.-
T Consensus 89 ~E~~es~~---~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgG-D~~~y~~dlE~G~i~r~~rGHtDYvH~vv~ 164 (325)
T KOG0649|consen 89 NEEEESLA---TKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGG-DGVIYQVDLEDGRIQREYRGHTDYVHSVVG 164 (325)
T ss_pred hhhhhhcc---chhhhhhcCccccCcccCCccceeEeccCCCcEEEecC-CeEEEEEEecCCEEEEEEcCCcceeeeeee
Confidence 54321000 00000000111111223467899999998888888887 999999999999999999999999999987
Q ss_pred ccCCCCEEEEEecCceEEEEECCCCccccceeeeee-----ecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy9598 773 HPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNI-----VEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFK 847 (1915)
Q Consensus 773 sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~-----~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~ 847 (1915)
-. ....++||+.||+++|||..++++ +..+... +..+-...|-+++ -+..+|+||+. -.+.+|.+.+.+
T Consensus 165 R~-~~~qilsG~EDGtvRvWd~kt~k~--v~~ie~yk~~~~lRp~~g~wigala--~~edWlvCGgG-p~lslwhLrsse 238 (325)
T KOG0649|consen 165 RN-ANGQILSGAEDGTVRVWDTKTQKH--VSMIEPYKNPNLLRPDWGKWIGALA--VNEDWLVCGGG-PKLSLWHLRSSE 238 (325)
T ss_pred cc-cCcceeecCCCccEEEEeccccce--eEEeccccChhhcCcccCceeEEEe--ccCceEEecCC-CceeEEeccCCC
Confidence 44 455689999999999999999988 5544321 1111112344444 45567887766 589999999988
Q ss_pred ccccCCC-----ceeecCCCC
Q psy9598 848 RPQNIPR-----ELFFHTDYR 863 (1915)
Q Consensus 848 ~~~~l~~-----~~~F~~d~~ 863 (1915)
+...+|- .+.|-.|..
T Consensus 239 ~t~vfpipa~v~~v~F~~d~v 259 (325)
T KOG0649|consen 239 STCVFPIPARVHLVDFVDDCV 259 (325)
T ss_pred ceEEEecccceeEeeeecceE
Confidence 8777654 345655543
No 287
>KOG1310|consensus
Probab=99.54 E-value=6.4e-14 Score=164.79 Aligned_cols=181 Identities=18% Similarity=0.211 Sum_probs=138.5
Q ss_pred EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe-ecCCCCeEEEEeccCccCCCcEEEEEeCCCeE
Q psy9598 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL-VGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l-~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI 588 (1915)
+.+.|.||++.|+||.|+.+|.+|+|||.|-.|.|||.-..++++.+ .||.+.|+++.|.|.. +..++++|+.|..|
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~t--nnriv~sgAgDk~i 119 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYT--NNRIVLSGAGDKLI 119 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccC--CCeEEEeccCcceE
Confidence 44578999999999999999999999999999999999988888877 4899999999999976 67899999999999
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCce-------eEEec
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLG-------ILEVE 660 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~-------i~~l~ 660 (1915)
+++|+.....-.. -+.......-+..|...|..++..|++ ..+.+++.||+|+-||++....... +..+.
T Consensus 120 ~lfdl~~~~~~~~--d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~ 197 (758)
T KOG1310|consen 120 KLFDLDSSKEGGM--DHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN 197 (758)
T ss_pred EEEeccccccccc--ccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence 9999985322110 011111222344667888889999988 7889999999999999964221111 11111
Q ss_pred cCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEccC
Q psy9598 661 EHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKC 694 (1915)
Q Consensus 661 ~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~~ 694 (1915)
..--...|+.++|.. .+|++|+.|-.+++||.+.
T Consensus 198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr 232 (758)
T KOG1310|consen 198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRR 232 (758)
T ss_pred hhhheeeeeeecCCCCceEEecCCCchhhhhhhhh
Confidence 122345788888875 4889999999999999653
No 288
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.53 E-value=3.5e-12 Score=157.47 Aligned_cols=341 Identities=12% Similarity=0.110 Sum_probs=210.0
Q ss_pred CEE-EEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEE
Q psy9598 489 EVI-VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVN 567 (1915)
Q Consensus 489 ~~L-aTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~ 567 (1915)
+++ ++-..+|.|.|.|..+.+.+..+..+...-..+.|++||+++++++.||.|.++|+.+++.+..+.... ...+++
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~ 84 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIA 84 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEE
Confidence 344 455568999999999999999998655544567899999999999999999999999999999987544 457899
Q ss_pred eccCccCCCcEEEEEe-CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CCeEEEE
Q psy9598 568 FCPLEVNGFNYLASTS-TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DHHVRVY 645 (1915)
Q Consensus 568 fsp~~~~d~~~L~sgs-~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~I~Iw 645 (1915)
++++ ++++++++ ..+.|.++|..+.+.+..+....... ......+..+..++....+++.-. .+.|.+.
T Consensus 85 ~s~D----G~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~-----~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vV 155 (369)
T PF02239_consen 85 VSPD----GKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPV-----DGPESRVAAIVASPGRPEFVVNLKDTGEIWVV 155 (369)
T ss_dssp E--T----TTEEEEEEEETTEEEEEETTT--EEEEEE--EE-T-----TTS---EEEEEE-SSSSEEEEEETTTTEEEEE
T ss_pred EcCC----CCEEEEEecCCCceeEeccccccceeecccccccc-----cccCCCceeEEecCCCCEEEEEEccCCeEEEE
Confidence 9984 47777665 68999999998887655544331100 002356778888888875555544 4788777
Q ss_pred EecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE-eCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccE
Q psy9598 646 KMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG-SRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKV 724 (1915)
Q Consensus 646 Dl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg-s~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 724 (1915)
|.... ....+. ............|+|++++|+++ .....|-++|..++...... +..................+.+
T Consensus 156 dy~d~-~~~~~~-~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i-~~g~~p~~~~~~~~php~~g~v 232 (369)
T PF02239_consen 156 DYSDP-KNLKVT-TIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALI-DTGKKPHPGPGANFPHPGFGPV 232 (369)
T ss_dssp ETTTS-SCEEEE-EEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEE-E-SSSBEETTEEEEEETTTEEE
T ss_pred Eeccc-ccccee-eecccccccccccCcccceeeecccccceeEEEeeccceEEEEe-eccccccccccccccCCCcceE
Confidence 86433 222222 22344567788999999987765 46678999999988755432 1111000000000001111223
Q ss_pred EEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEE----ecCceEEEEECCCCccc
Q psy9598 725 TMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA----GHDGLIIIWDILSSKQR 800 (1915)
Q Consensus 725 ~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSg----s~DG~I~IWdl~s~~~~ 800 (1915)
+.. ...+.+.++..+ ...+.+||..+.+.+..+....++ ..+..|| ++.+|.+. ...++|.|+|..+.+.
T Consensus 233 w~~--~~~~~~~~~~ig-~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP-~s~~vwvd~~~~~~~~~v~viD~~tl~~- 306 (369)
T PF02239_consen 233 WAT--SGLGYFAIPLIG-TDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHP-DSRYVWVDTFLNPDADTVQVIDKKTLKV- 306 (369)
T ss_dssp EEE--EBSSSSEEEEEE---TTT-STTTBTSEEEEEE-SSSS---EE--T-T-SEEEEE-TT-SSHT-EEEEECCGTEE-
T ss_pred Eee--ccccceeccccc-CCccccchhhcCeEEEEEECCCCc-ceeecCC-CCccEEeeccCCCCCceEEEEECcCcce-
Confidence 222 223444434444 456778999999999999987777 7788899 88888887 4458999999988754
Q ss_pred cceeeeeeecCCCCcceEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCcccccCC
Q psy9598 801 GYKWFHNIVEGQGEGALFDGKWSPDGTTCALTD--SYGHLLVYGLGGFKRPQNIP 853 (1915)
Q Consensus 801 ~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~--~dG~I~Iwdl~s~~~~~~l~ 853 (1915)
...+. . .....+..+.|++||..+.++. .+|.|.|||..+.+....++
T Consensus 307 -~~~i~---~-~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 307 -VKTIT---P-GPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp -EE-HH---H-HHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred -eEEEe---c-cCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 33332 1 1113488999999999766554 44579999999999888777
No 289
>KOG2110|consensus
Probab=99.53 E-value=1.5e-12 Score=148.63 Aligned_cols=244 Identities=15% Similarity=0.215 Sum_probs=173.5
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC--eEEEEeccc
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG--CIGFWKYKL 595 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg--tI~iWDl~~ 595 (1915)
...|..+.|+.+...|..|+.|| .+++.................|.-+-|+. .+++..+.+. .++++++..
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSS------SLvaiV~~~qpr~Lkv~~~Kk 77 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSS------SLVAIVSIKQPRKLKVVHFKK 77 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeeccc------ceeEEEecCCCceEEEEEccc
Confidence 44677888999999999999998 47888765444322222334566667765 5666665544 488888887
Q ss_pred CccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg 675 (1915)
+..+....+. ..|.++.++.+ .|+++-.+ .|+|||+....-...+.....+...+.++++++.+
T Consensus 78 ~~~ICe~~fp-------------t~IL~VrmNr~--RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n 141 (391)
T KOG2110|consen 78 KTTICEIFFP-------------TSILAVRMNRK--RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNAN 141 (391)
T ss_pred CceEEEEecC-------------CceEEEEEccc--eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCC
Confidence 7666666555 56788888654 56665554 49999995433222222222333334444333333
Q ss_pred CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc
Q psy9598 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD 755 (1915)
Q Consensus 676 ~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~ 755 (1915)
.+|+-- ++...|.|.|||+.+.+
T Consensus 142 ~ylAyp---------------------------------------------------------~s~t~GdV~l~d~~nl~ 164 (391)
T KOG2110|consen 142 CYLAYP---------------------------------------------------------GSTTSGDVVLFDTINLQ 164 (391)
T ss_pred ceEEec---------------------------------------------------------CCCCCceEEEEEcccce
Confidence 333221 11125789999999999
Q ss_pred eEEEeeCCCCCeEEEEEccCCCCEEEEEecCce-EEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeC
Q psy9598 756 LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGL-IIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS 834 (1915)
Q Consensus 756 ~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~-I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~ 834 (1915)
.+..+.+|.+.+-+|+|++ +|.+|||++..|+ |||+.+.+|+. +..|. .|.....|++++|+||+.+|++++.
T Consensus 165 ~v~~I~aH~~~lAalafs~-~G~llATASeKGTVIRVf~v~~G~k--l~eFR---RG~~~~~IySL~Fs~ds~~L~~sS~ 238 (391)
T KOG2110|consen 165 PVNTINAHKGPLAALAFSP-DGTLLATASEKGTVIRVFSVPEGQK--LYEFR---RGTYPVSIYSLSFSPDSQFLAASSN 238 (391)
T ss_pred eeeEEEecCCceeEEEECC-CCCEEEEeccCceEEEEEEcCCccE--eeeee---CCceeeEEEEEEECCCCCeEEEecC
Confidence 9999999999999999999 9999999999997 58999999888 55554 4555578999999999999999999
Q ss_pred CCeEEEEeCCCCc
Q psy9598 835 YGHLLVYGLGGFK 847 (1915)
Q Consensus 835 dG~I~Iwdl~s~~ 847 (1915)
.++|+||.+....
T Consensus 239 TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 239 TETVHIFKLEKVS 251 (391)
T ss_pred CCeEEEEEecccc
Confidence 9999999998643
No 290
>KOG0771|consensus
Probab=99.53 E-value=1e-13 Score=161.17 Aligned_cols=205 Identities=19% Similarity=0.199 Sum_probs=157.4
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecC
Q psy9598 480 FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 559 (1915)
Q Consensus 480 ~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h 559 (1915)
.+|+|+.+|..|+||+.||+++||++.+...+.....|.+.|.+|.|+|||.+|++-+.| ..+||++.+|.+++.....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 789999999999999999999999998988888888999999999999999999999999 8999999999877766532
Q ss_pred --CCCeEEEEeccCccCCCcEEEE-EeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEE
Q psy9598 560 --QGIITGVNFCPLEVNGFNYLAS-TSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 636 (1915)
Q Consensus 560 --~~~V~sl~fsp~~~~d~~~L~s-gs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasg 636 (1915)
.-....+.|+.+.....-+|++ ...-+.|+.|++.....-..+.. .........|.|++++.+|++++.|
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~-------~~~~~~~~siSsl~VS~dGkf~AlG 299 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRL-------RKKIKRFKSISSLAVSDDGKFLALG 299 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccch-------hhhhhccCcceeEEEcCCCcEEEEe
Confidence 2356677887754321222222 33446677777654332111111 1111223579999999999999999
Q ss_pred eCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy9598 637 SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 694 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~ 694 (1915)
+.||.|-|++..... .....-..|...|+.|.|+|+.+++++.+.|..+.|..+.-
T Consensus 300 T~dGsVai~~~~~lq--~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 300 TMDGSVAIYDAKSLQ--RLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred ccCCcEEEEEeceee--eeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 999999999984322 22233467999999999999999999999999998886654
No 291
>KOG4497|consensus
Probab=99.52 E-value=7.5e-13 Score=147.80 Aligned_cols=326 Identities=16% Similarity=0.194 Sum_probs=209.7
Q ss_pred CCcEEEEEEcCCCCEEEEE-ECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCE-EEEEeCCCcEEEEECCCCceE
Q psy9598 476 LSAVFCVLFDKLGEVIVTG-ADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL-LAAGTVDKTIRIWNLQTLAPI 553 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTG-s~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~-LaSgs~DgtIrVWDl~tg~~~ 553 (1915)
.+.|.-+.|..+.-+++++ ..++.|.+|++...+-...+....+++.+++|||||+. |.+...+-.|.||.+.+.+..
T Consensus 48 ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~ 127 (447)
T KOG4497|consen 48 LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY 127 (447)
T ss_pred HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE
Confidence 4677788999888777665 56889999999888888888888899999999999964 556667899999999887655
Q ss_pred EEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEE
Q psy9598 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL 633 (1915)
Q Consensus 554 ~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~L 633 (1915)
..-. ....+..++|+|+ +++.+.++.-...-+.++..-+ .-.....+...+-..+.+.|+|||+.|
T Consensus 128 ~~~~-pK~~~kg~~f~~d----g~f~ai~sRrDCkdyv~i~~c~---------~W~ll~~f~~dT~DltgieWsPdg~~l 193 (447)
T KOG4497|consen 128 LLPH-PKTNVKGYAFHPD----GQFCAILSRRDCKDYVQISSCK---------AWILLKEFKLDTIDLTGIEWSPDGNWL 193 (447)
T ss_pred Eecc-cccCceeEEECCC----CceeeeeecccHHHHHHHHhhH---------HHHHHHhcCCCcccccCceECCCCcEE
Confidence 4332 2345689999994 4777777653221111111100 001111122223556789999999877
Q ss_pred EEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEE--------------
Q psy9598 634 ATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRF-------------- 699 (1915)
Q Consensus 634 asgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~-------------- 699 (1915)
|+ ||.- -...+. .....-.+..++|+|.+++|++|+.|+.++|-+--+-+...
T Consensus 194 aV---------wd~~---Leykv~-aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~ 260 (447)
T KOG4497|consen 194 AV---------WDNV---LEYKVY-AYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLH 260 (447)
T ss_pred EE---------ecch---hhheee-eeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhh
Confidence 64 5430 001111 11123467889999999999999999998875422111000
Q ss_pred ---------eeeccc------c---------------------cCCCCccccccccccccEEEEEECCCCCEEEEEEe-c
Q psy9598 700 ---------IRLDMN------T---------------------CLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN-F 742 (1915)
Q Consensus 700 ---------~~~~~~------~---------------------~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~-~ 742 (1915)
..+.+. + .................+..++|++|..|+++-.. .
T Consensus 261 ~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~ 340 (447)
T KOG4497|consen 261 LLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKY 340 (447)
T ss_pred hhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCC
Confidence 000000 0 00011111223334567888999999999887653 2
Q ss_pred CCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEE
Q psy9598 743 NFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW 822 (1915)
Q Consensus 743 Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vaf 822 (1915)
-+.+.+||++..++...+. ...+|....|+| ....|+.+.....+++|....... +. ..+.+ -.|..++|
T Consensus 341 PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP-~~prL~vctg~srLY~W~psg~~~--V~-----vP~~G-F~i~~l~W 410 (447)
T KOG4497|consen 341 PNALWLWDLQNLKLHAVLI-QKHPIRAFEWDP-GRPRLVVCTGKSRLYFWAPSGPRV--VG-----VPKKG-FNIQKLQW 410 (447)
T ss_pred CceEEEEechhhhhhhhhh-hccceeEEEeCC-CCceEEEEcCCceEEEEcCCCceE--Ee-----cCCCC-ceeeeEEe
Confidence 3579999998877655553 456799999999 444455555556799998866433 11 11122 57999999
Q ss_pred cCCCCEEEEEeCCCeE
Q psy9598 823 SPDGTTCALTDSYGHL 838 (1915)
Q Consensus 823 Spdg~~Lasg~~dG~I 838 (1915)
..+|..|+.++.|...
T Consensus 411 ~~~g~~i~l~~kDafc 426 (447)
T KOG4497|consen 411 LQPGEFIVLCGKDAFC 426 (447)
T ss_pred cCCCcEEEEEcCCceE
Confidence 9999999999988543
No 292
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=6.4e-13 Score=169.31 Aligned_cols=232 Identities=16% Similarity=0.118 Sum_probs=164.5
Q ss_pred CCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCce--EEEeecCCCCeEEEEeccC
Q psy9598 497 DLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD---KTIRIWNLQTLAP--ISVLVGHQGIITGVNFCPL 571 (1915)
Q Consensus 497 Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D---gtIrVWDl~tg~~--~~~l~~h~~~V~sl~fsp~ 571 (1915)
+..|.|||..... ...+..|...|.+++|+|||+.|+.++.+ ..|++||+.++.. +..+.+| ..+++|+|+
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPD 258 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCC
Confidence 4689999985544 56677888899999999999999987754 4699999998764 3333333 447899994
Q ss_pred ccCCCcEEEEE-eCCCeEEEEe--cccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEe-CCCeEEEEEe
Q psy9598 572 EVNGFNYLAST-STDGCIGFWK--YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS-GDHHVRVYKM 647 (1915)
Q Consensus 572 ~~~d~~~L~sg-s~DgtI~iWD--l~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~IwDl 647 (1915)
+..|+++ +.+|.+.||. +.++.. . .+..+...+.+.+|+|+|..|+.++ .+|.+.||++
T Consensus 259 ----G~~La~~~~~~g~~~Iy~~d~~~~~~-~------------~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~ 321 (429)
T PRK01742 259 ----GSRLAFASSKDGVLNIYVMGANGGTP-S------------QLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRM 321 (429)
T ss_pred ----CCEEEEEEecCCcEEEEEEECCCCCe-E------------eeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 4666665 4688777664 443321 1 1112335577899999999777655 5788899988
Q ss_pred cCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEE
Q psy9598 648 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV 727 (1915)
Q Consensus 648 ~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 727 (1915)
+........ + .+.. .+++|+|+|.+|+.++.++ +.+||+.++.+...... .....+
T Consensus 322 ~~~~~~~~~--l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~------------------~~~~~~ 377 (429)
T PRK01742 322 SASGGGASL--V-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST------------------FLDESP 377 (429)
T ss_pred ECCCCCeEE--e-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC------------------CCCCCc
Confidence 533222221 2 3333 4578999999998888765 55699988764432100 011347
Q ss_pred EECCCCCEEEEEEecCCeEEEEEC--CCCceEEEeeCCCCCeEEEEEcc
Q psy9598 728 AWDASDRWVITAINFNFQIKIWDA--FNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 728 a~spdg~~L~t~s~~Dg~I~vwD~--~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
+|+|+|.+|++++. ++.+.+|.+ .+|..+..+.+|.+.+..++|+|
T Consensus 378 ~~sPdG~~i~~~s~-~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp 425 (429)
T PRK01742 378 SISPNGIMIIYSST-QGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSP 425 (429)
T ss_pred eECCCCCEEEEEEc-CCCceEEEEEECCCCceEEccCCCCCCCCcccCC
Confidence 89999999999988 888888775 36888999999999899999998
No 293
>KOG1240|consensus
Probab=99.51 E-value=1.2e-12 Score=167.13 Aligned_cols=272 Identities=17% Similarity=0.210 Sum_probs=184.1
Q ss_pred EECCCCcEEEEEeCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCC-------CceEEEeecCCCCeEEEEeccCccC
Q psy9598 503 WRARDGKLLATLRGCSGEISDIAIDNRN-ILLAAGTVDKTIRIWNLQT-------LAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 503 Wd~~tg~~~~~l~gH~~~I~~Lafspdg-~~LaSgs~DgtIrVWDl~t-------g~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
|++ .|.++..+.-|...|..++.++.. .+++|||.||+|+||++.. .+...++......+.++.+++
T Consensus 1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~---- 1108 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG---- 1108 (1431)
T ss_pred CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc----
Confidence 664 688999999999999999988765 9999999999999999863 123334444567889999988
Q ss_pred CCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-Cc-EEEEEeCCCeEEEEEecCCCC
Q psy9598 575 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GL-FLATGSGDHHVRVYKMDGVDS 652 (1915)
Q Consensus 575 d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~-~Lasgs~Dg~I~IwDl~~~~~ 652 (1915)
+++.+|+++.||.|.+.++...... ...... ............|.+-+|... +. .|+.+...+.|..||++....
T Consensus 1109 ~~~~~Av~t~DG~v~~~~id~~~~~-~~~~~~--~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~ 1185 (1431)
T KOG1240|consen 1109 NGDQFAVSTKDGSVRVLRIDHYNVS-KRVATQ--VRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHD 1185 (1431)
T ss_pred CCCeEEEEcCCCeEEEEEccccccc-cceeee--eecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhh
Confidence 4589999999999999998763111 111000 000011111223444444432 33 688888899999999954332
Q ss_pred CceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECC-
Q psy9598 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA- 731 (1915)
Q Consensus 653 ~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~sp- 731 (1915)
.. ........+.|++++.+|.+.++++|+..|.+.+||++-+..+.. -..++...+..++.++
T Consensus 1186 ~w-~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~s---------------w~~P~~~~i~~v~~~~~ 1249 (1431)
T KOG1240|consen 1186 AW-RLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILS---------------WEHPARAPIRHVWLCPT 1249 (1431)
T ss_pred HH-hhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeec---------------ccCcccCCcceEEeecc
Confidence 22 223344568899999999999999999999999999986653221 1122334555555554
Q ss_pred --CCCEEEEEEe-cCCeEEEEECCCCceEEEeeCCCC-------------------CeEEEEEccCCCCEEEEEecCceE
Q psy9598 732 --SDRWVITAIN-FNFQIKIWDAFNGDLVQVLKGHTN-------------------EVFVLESHPFDSRVLLSAGHDGLI 789 (1915)
Q Consensus 732 --dg~~L~t~s~-~Dg~I~vwD~~tg~~i~~l~gH~~-------------------~V~sl~~sp~dg~~LaSgs~DG~I 789 (1915)
....+++++. ..+.|.+|++.+|.+..++-...+ .....++.- .+.++++||.|+.|
T Consensus 1250 ~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~-~~~~~ltggsd~kI 1328 (1431)
T KOG1240|consen 1250 YPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCE-KNGFLLTGGSDMKI 1328 (1431)
T ss_pred CCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeeccc-CCceeeecCCccce
Confidence 3445555554 578899999999987776653311 111122222 46689999999999
Q ss_pred EEEECCCCcc
Q psy9598 790 IIWDILSSKQ 799 (1915)
Q Consensus 790 ~IWdl~s~~~ 799 (1915)
+.||......
T Consensus 1329 R~wD~~~p~~ 1338 (1431)
T KOG1240|consen 1329 RKWDPTRPEI 1338 (1431)
T ss_pred eeccCCCccc
Confidence 9999976554
No 294
>KOG1272|consensus
Probab=99.51 E-value=8e-14 Score=162.11 Aligned_cols=266 Identities=14% Similarity=0.155 Sum_probs=200.8
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEee
Q psy9598 478 AVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV 557 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~ 557 (1915)
.-+.+.|+.+|++|+.|+.-|.|-.+|+.++.+...+.. ...|.++.|-.+.+++|++- ...+.|||- .|..++.+.
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~-~GtElHClk 207 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQ-KKYVYVYDN-NGTELHCLK 207 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhh-hceEEEecC-CCcEEeehh
Confidence 345788999999999999999999999999999988863 45799999999888888875 568999995 477888887
Q ss_pred cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEe
Q psy9598 558 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 637 (1915)
Q Consensus 558 ~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs 637 (1915)
.| ..|..+.|.|.. .+|++++..|.++.-|+.+|..+..+.. +.+.+..++-+|-...+-+|.
T Consensus 208 ~~-~~v~rLeFLPyH----fLL~~~~~~G~L~Y~DVS~GklVa~~~t------------~~G~~~vm~qNP~NaVih~Gh 270 (545)
T KOG1272|consen 208 RH-IRVARLEFLPYH----FLLVAASEAGFLKYQDVSTGKLVASIRT------------GAGRTDVMKQNPYNAVIHLGH 270 (545)
T ss_pred hc-Cchhhhcccchh----heeeecccCCceEEEeechhhhhHHHHc------------cCCccchhhcCCccceEEEcC
Confidence 65 468999999976 7889999999999999999976554433 346778888999888999999
Q ss_pred CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 638 GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 638 ~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
.+|+|.+|.. .....+..+..|.++|.+|++.++|.+++|++.|..|+|||++.........
T Consensus 271 snGtVSlWSP---~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~--------------- 332 (545)
T KOG1272|consen 271 SNGTVSLWSP---NSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYR--------------- 332 (545)
T ss_pred CCceEEecCC---CCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceee---------------
Confidence 9999999987 3445566677899999999999999999999999999999998765222110
Q ss_pred ccccccEEEEEECCCCCEEEEEEecCCeEEEEEC-CCC--ceEEEeeCC--CCCeEEEEEccCCCCEEEEEecCc
Q psy9598 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA-FNG--DLVQVLKGH--TNEVFVLESHPFDSRVLLSAGHDG 787 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~-~tg--~~i~~l~gH--~~~V~sl~~sp~dg~~LaSgs~DG 787 (1915)
.......++||..|- |+ ++. ...|.||-- ..+ ..-.-+-.| .+.|..|.|+| -..+|-.|..-|
T Consensus 333 --tp~~a~~ls~Sqkgl-LA-~~~-G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP-~EDvLGIGH~~G 401 (545)
T KOG1272|consen 333 --TPHPASNLSLSQKGL-LA-LSY-GDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCP-YEDVLGIGHAGG 401 (545)
T ss_pred --cCCCccccccccccc-ee-eec-CCeeeeehhhhcCCCCCCcchhhhccCcccccceecc-HHHeeeccccCC
Confidence 123445677776553 33 333 457899952 221 111111122 34788888888 555555554333
No 295
>COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
Probab=99.50 E-value=1e-14 Score=180.38 Aligned_cols=173 Identities=25% Similarity=0.370 Sum_probs=144.7
Q ss_pred ChHHHHhhcccccCCHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCCCCcchhhhhccccCCCCCc
Q psy9598 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSE 80 (1915)
Q Consensus 1 L~tI~~kl~~~~Y~~~~ef~~D~~li~~Na~~yN~p~s~I~~~A~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1915)
|.||++||+++.|.++++|+.||+|||.||++||+|+|.|+.+|+.|.+++.+.|..++...+...+..- ...
T Consensus 191 L~~i~kkl~~~~Y~s~eef~~D~~lM~~N~~~yN~~~s~v~~~a~~l~~~~~~~i~~~~~~~~~~~~~~~-------~~~ 263 (371)
T COG5076 191 LLTIQKKLKNGRYKSFEEFVSDLNLMFDNCKLYNGPDSSVYVDAKELEKYFLKLIEEIPEEMLELSIKPG-------REE 263 (371)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHHhhhhccCCCcchhhhhHHHHHHHHHHHHhccccchhhccCcc-------ccc
Confidence 6899999999999999999999999999999999999999999999999999999987765543221000 000
Q ss_pred ccccccccccccccCCCCcchhhhhhhhccccCCchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCH
Q psy9598 81 EEEEEDSKSRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160 (1915)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl 160 (1915)
+. . +-..++.....+..+|+|+.++.....|+|+++|..+|++
T Consensus 264 -----------~~-----~---------------------~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 306 (371)
T COG5076 264 -----------RE-----E---------------------RESVLITNSQAHVGAWPFLRPVSDEEVPDYYKDIRDPMDL 306 (371)
T ss_pred -----------cc-----c---------------------chhhcccccccccccccccccCCcccccchhhhhhccccc
Confidence 00 0 0112333446667789999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9598 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218 (1915)
Q Consensus 161 ~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s~i~~~a~~l~~~f~~~~~~~ 218 (1915)
.|.+-++..+.|...++|..|..++|.||..||..- ..++.-+..+..+|...+...
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 363 (371)
T COG5076 307 STKELKLRNNYYRPEETFVRDAKLFFDNCVMYNGEV-TDYYKNANVLEDFVIKKTRLI 363 (371)
T ss_pred ccchhhhhcccCCCccccccccchhhhcccccchhh-hhhhhhccchhhhHhhhhhhh
Confidence 999999999999999999999999999999999955 888888888888888776654
No 296
>KOG1245|consensus
Probab=99.49 E-value=1.6e-14 Score=197.38 Aligned_cols=95 Identities=39% Similarity=0.642 Sum_probs=91.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCHHH
Q psy9598 1537 CREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 1616 (1915)
Q Consensus 1537 ~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~i~ 1616 (1915)
|..||..|+.|+.||||++||+..++||||+|||+||||+||+.|+..|.|.++.+|..||.|||.||.+||.+ |.|+
T Consensus 1306 ~e~il~e~~~~~~awPFlepVn~~~vp~Y~~IIk~Pmdl~tir~k~~~~~Y~~~eef~~Di~lvf~Nc~~yN~~--s~i~ 1383 (1404)
T KOG1245|consen 1306 CEDILHELVVHKAAWPFLEPVNPKEVPDYYDIIKKPMDLSTIREKLSKGIYPSPEEFATDIELVFDNCETYNED--SEIG 1383 (1404)
T ss_pred HHHHHHHHHHhhhcchhhccCChhhcccHHHHhcChhHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHhccc--hhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999985 8999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy9598 1617 IMTTRLSEFAEEHLRRL 1633 (1915)
Q Consensus 1617 ~~a~~l~~~f~~~~~~~ 1633 (1915)
.....|.++|+..|+..
T Consensus 1384 ~ag~~l~~ff~~~~~~~ 1400 (1404)
T KOG1245|consen 1384 RAGTCLRRFFHKRWRKK 1400 (1404)
T ss_pred hhcchHHHHHHHHHHhh
Confidence 99999999999977654
No 297
>KOG2139|consensus
Probab=99.49 E-value=7e-12 Score=142.19 Aligned_cols=295 Identities=17% Similarity=0.219 Sum_probs=193.2
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEee-cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc
Q psy9598 519 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV-GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI 597 (1915)
Q Consensus 519 ~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~-~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~ 597 (1915)
..+..++|++.-..+|++..|-+|+||+-.. .+...++ .....|+|++|-|.+ ..-|+.|+..| |+||......
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPls---aselavgCr~g-IciW~~s~tl 173 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLS---ASELAVGCRAG-ICIWSDSRTL 173 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCC---cceeeeeecce-eEEEEcCccc
Confidence 3567789999777789999999999999876 4444444 345789999999964 46888888866 8999765433
Q ss_pred cccce-eccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC
Q psy9598 598 DISKT-VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675 (1915)
Q Consensus 598 ~~~~~-~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg 675 (1915)
..... .............++...|+++.|.+||..+++++. +..|.|||.+.. ....+ ..-..+.++-+.|||+|
T Consensus 174 n~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg-~~~pL--~~~glgg~slLkwSPdg 250 (445)
T KOG2139|consen 174 NANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTG-QKIPL--IPKGLGGFSLLKWSPDG 250 (445)
T ss_pred ccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCC-Ccccc--cccCCCceeeEEEcCCC
Confidence 22211 000001111112244588999999999999998775 578999999542 22222 23455678899999999
Q ss_pred CEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC-C
Q psy9598 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-G 754 (1915)
Q Consensus 676 ~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-g 754 (1915)
.+|++++-|+..++|.....- .... ..-..+.|...+|+|+|++|+.++. |.-.+|.+.. +
T Consensus 251 d~lfaAt~davfrlw~e~q~w-t~er---------------w~lgsgrvqtacWspcGsfLLf~~s--gsp~lysl~f~~ 312 (445)
T KOG2139|consen 251 DVLFAATCDAVFRLWQENQSW-TKER---------------WILGSGRVQTACWSPCGSFLLFACS--GSPRLYSLTFDG 312 (445)
T ss_pred CEEEEecccceeeeehhcccc-eecc---------------eeccCCceeeeeecCCCCEEEEEEc--CCceEEEEeecC
Confidence 999999999999999644321 1100 1112347899999999999988876 4444454321 1
Q ss_pred c--------------eEEEe------eC---CCCCeEEEEEccCCCCEEEEEecC--------ceEEEEECCCCccccce
Q psy9598 755 D--------------LVQVL------KG---HTNEVFVLESHPFDSRVLLSAGHD--------GLIIIWDILSSKQRGYK 803 (1915)
Q Consensus 755 ~--------------~i~~l------~g---H~~~V~sl~~sp~dg~~LaSgs~D--------G~I~IWdl~s~~~~~~~ 803 (1915)
+ ++..| .+ -.+.+.+++|.| .|.+||+.-.. +.|.+||....-.. ..
T Consensus 313 ~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDp-sGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~v-el 390 (445)
T KOG2139|consen 313 EDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDP-SGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPV-EL 390 (445)
T ss_pred CCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECC-CCCEEEEEEcCCchhhhhhhhhhhhcccccCce-EE
Confidence 0 11111 11 145789999999 89999886543 34667777654331 11
Q ss_pred eeeeeecCCCCcceEEEEEcC---CCCEEEEEeCCCeEEEEeCC
Q psy9598 804 WFHNIVEGQGEGALFDGKWSP---DGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 804 ~~~~~~~~~~~~~V~~vafSp---dg~~Lasg~~dG~I~Iwdl~ 844 (1915)
.+..++.+.+ ..-++|+| +|.+|.++-+.|.+.-|.+.
T Consensus 391 s~cg~i~ge~---P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 391 SYCGMIGGEY---PAYISFGPLKNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred EecccccCCC---CceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence 1122333333 34456665 68888888888888888764
No 298
>KOG1354|consensus
Probab=99.49 E-value=2.6e-12 Score=144.62 Aligned_cols=275 Identities=13% Similarity=0.180 Sum_probs=189.8
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc-----eEEEeecCC------------CCeEEEEeccCccCCCcEEE
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA-----PISVLVGHQ------------GIITGVNFCPLEVNGFNYLA 580 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~-----~~~~l~~h~------------~~V~sl~fsp~~~~d~~~L~ 580 (1915)
..-|.+|.|...|.+||+|..+|.|.++.-.... ....++.|. ..|+.|.|++.+ +...++
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~--n~a~FL 102 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDG--NLAEFL 102 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCC--CccEEE
Confidence 4568999999999999999999999998654321 233455554 358889999865 677888
Q ss_pred EEeCCCeEEEEecccCcccc---------------ceecc--Ccc-------ccccccCCCCCceEEEEECCCCcEEEEE
Q psy9598 581 STSTDGCIGFWKYKLDIDIS---------------KTVFH--EPV-------MFNERIRPGNAHILCSSFSPGGLFLATG 636 (1915)
Q Consensus 581 sgs~DgtI~iWDl~~~~~~~---------------~~~~~--~~~-------~~~~~~~~~~~~V~~l~fspdg~~Lasg 636 (1915)
..+.|.+|++|-+....... .+... .+. .......+|...|++++++.|+..++++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA 182 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA 182 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence 88899999999876432211 00000 000 0001124677889999999999988876
Q ss_pred eCCCeEEEEEecCCCCCceeEEeccCC-----CCeeEEEEcCC-CCEEEEEeCCCcEEEEEccCCceEEeeecccccCCC
Q psy9598 637 SGDHHVRVYKMDGVDSPLGILEVEEHS-----DKVDSIQWSHS-HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPH 710 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~~~~i~~l~~h~-----~~V~sl~fspd-g~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~ 710 (1915)
.|-.|.+|++.-......+..+..+. .-|++..|+|. .+.|+-++..|+|++.|++...+......+......
T Consensus 183 -DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped 261 (433)
T KOG1354|consen 183 -DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED 261 (433)
T ss_pred -cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence 56789999996555555555555543 45888889986 457888889999999999865422111111011111
Q ss_pred CccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEEC-CCCceEEEeeCCCC------------C---eEEEEEcc
Q psy9598 711 TKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA-FNGDLVQVLKGHTN------------E---VFVLESHP 774 (1915)
Q Consensus 711 ~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~-~tg~~i~~l~gH~~------------~---V~sl~~sp 774 (1915)
.............|..+.|+.+|+||++-.. -+|+|||+ ...+++.++..|.. . -+.++|+.
T Consensus 262 p~~rsffseiIsSISDvKFs~sGryilsRDy--ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg 339 (433)
T KOG1354|consen 262 PSSRSFFSEIISSISDVKFSHSGRYILSRDY--LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSG 339 (433)
T ss_pred CcchhhHHHHhhhhhceEEccCCcEEEEecc--ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcC
Confidence 1111223334567888999999999998753 68999999 45677777777642 2 25678988
Q ss_pred CCCCEEEEEecCceEEEEECCCCc
Q psy9598 775 FDSRVLLSAGHDGLIIIWDILSSK 798 (1915)
Q Consensus 775 ~dg~~LaSgs~DG~I~IWdl~s~~ 798 (1915)
++.+++|||....++++++..|.
T Consensus 340 -~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 340 -NDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred -CcceEecccccceEEEecCCCCc
Confidence 88899999999999999976554
No 299
>KOG2315|consensus
Probab=99.48 E-value=2.7e-11 Score=145.25 Aligned_cols=324 Identities=17% Similarity=0.164 Sum_probs=209.4
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEE-----eCC-----CcEEEE
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAG-----TVD-----KTIRIW 545 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSg-----s~D-----gtIrVW 545 (1915)
...++..++|++|+++|.+. +..|+|++..++..+.+...- .+.+|.|+|-|.+|.+- ..+ -.+.+|
T Consensus 34 ~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~ 110 (566)
T KOG2315|consen 34 SRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVY 110 (566)
T ss_pred CCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccc--eeeeeeecccccccccccccccccCCCCCCCceeee
Confidence 34477888999998888765 559999999888655444432 78999999999998763 112 357799
Q ss_pred ECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEE
Q psy9598 546 NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625 (1915)
Q Consensus 546 Dl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 625 (1915)
++.++.....+......-+++.|+.+. .|++--..+.|.||++.....+... -|...|..+.
T Consensus 111 ~vet~~~~s~~q~k~Q~~W~~qfs~dE-----sl~arlv~nev~f~~~~~f~~~~~k-------------l~~~~i~~f~ 172 (566)
T KOG2315|consen 111 NVETGVQRSQIQKKMQNGWVPQFSIDE-----SLAARLVSNEVQFYDLGSFKTIQHK-------------LSVSGITMLS 172 (566)
T ss_pred eeccceehhheehhhhcCcccccccch-----hhhhhhhcceEEEEecCCccceeee-------------eeccceeeEE
Confidence 999966655555433222788888853 3444444567999998764321111 1235678888
Q ss_pred ECCCCc--EEEE-----EeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCE-EE--EEeCCC---------c
Q psy9598 626 FSPGGL--FLAT-----GSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR-FV--SGSRDG---------T 686 (1915)
Q Consensus 626 fspdg~--~Las-----gs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~-L~--sgs~DG---------~ 686 (1915)
+||.+. +||+ +|.-+.|+||.+.-......+..-.-....-..+.|.+-|.- |+ +..-|. +
T Consensus 173 lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~ 252 (566)
T KOG2315|consen 173 LSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQT 252 (566)
T ss_pred ecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccce
Confidence 888743 4443 456678999988411111111110111222234667777762 22 222232 4
Q ss_pred EEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEE-EecCCeEEEEECCCCceEEEeeCCCC
Q psy9598 687 ALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA-INFNFQIKIWDAFNGDLVQVLKGHTN 765 (1915)
Q Consensus 687 I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~-s~~Dg~I~vwD~~tg~~i~~l~gH~~ 765 (1915)
+++.++....+.. .....++|.+++|+++|+-++++ |-.-..+.|||++ +.++..+ ..+
T Consensus 253 Lyll~t~g~s~~V-----------------~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~eg 312 (566)
T KOG2315|consen 253 LYLLATQGESVSV-----------------PLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEG 312 (566)
T ss_pred EEEEEecCceEEE-----------------ecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCC
Confidence 5555554222111 12246889999999999765544 3346689999984 6666655 355
Q ss_pred CeEEEEEccCCCCEEEEEec---CceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeC------CC
Q psy9598 766 EVFVLESHPFDSRVLLSAGH---DGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS------YG 836 (1915)
Q Consensus 766 ~V~sl~~sp~dg~~LaSgs~---DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~------dG 836 (1915)
+=+++-|+| .|++|+.+|. -|.|-|||+.+.++ +..+. ...-+-+.|+|||.+|++++. |+
T Consensus 313 pRN~~~fnp-~g~ii~lAGFGNL~G~mEvwDv~n~K~--i~~~~-------a~~tt~~eW~PdGe~flTATTaPRlrvdN 382 (566)
T KOG2315|consen 313 PRNTAFFNP-HGNIILLAGFGNLPGDMEVWDVPNRKL--IAKFK-------AANTTVFEWSPDGEYFLTATTAPRLRVDN 382 (566)
T ss_pred CccceEECC-CCCEEEEeecCCCCCceEEEeccchhh--ccccc-------cCCceEEEEcCCCcEEEEEeccccEEecC
Confidence 667888999 8999888876 48999999999777 55544 123455799999999998864 57
Q ss_pred eEEEEeCCCCcccc
Q psy9598 837 HLLVYGLGGFKRPQ 850 (1915)
Q Consensus 837 ~I~Iwdl~s~~~~~ 850 (1915)
.++||++.+.....
T Consensus 383 g~KiwhytG~~l~~ 396 (566)
T KOG2315|consen 383 GIKIWHYTGSLLHE 396 (566)
T ss_pred CeEEEEecCceeeh
Confidence 78999988765443
No 300
>KOG0008|consensus
Probab=99.46 E-value=6.3e-14 Score=180.18 Aligned_cols=181 Identities=23% Similarity=0.380 Sum_probs=139.5
Q ss_pred ChHHHHhhcccccCCHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCCCCcchhhhhccccCCCCCc
Q psy9598 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSE 80 (1915)
Q Consensus 1 L~tI~~kl~~~~Y~~~~ef~~D~~li~~Na~~yN~p~s~I~~~A~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1915)
|+|+++.+..+-|...+.|+.|+.||+.|..+||+|-+..+..|+.+...+...++.-... ... +......--.+
T Consensus 1304 lq~~kk~v~kr~y~~r~~fle~~~~~~~ns~~yng~~~~~t~~~q~mls~~~~~~~ekedk----~~~-lEk~Inplld~ 1378 (1563)
T KOG0008|consen 1304 LQTQKKLVRKRLYESREHFLEELPLIVSNSTKYNGPLASLTRQQQSMLSLCFEKLKEKEDK----LWR-LEKAINPLLDD 1378 (1563)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHhhchhhhcCchHHHHHHHHHHHHHHHHhhchhHHH----HHH-HHhhcCcccCc
Confidence 6899999999999999999999999999999999999999999999888776544431100 000 00000000000
Q ss_pred ccccccccccccccCCCCcchhhhhhhhccccCCchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCH
Q psy9598 81 EEEEEDSKSRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160 (1915)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl 160 (1915)
+ ....+ -....++.+++..+.+|||++||++..+|+||.+||+||||
T Consensus 1379 ~--------------------------------d~v~~-~~~d~~vs~~~~ipes~~f~~~v~~k~~~~yy~kik~pmdl 1425 (1563)
T KOG0008|consen 1379 D--------------------------------DQVAF-FILDNIVSQMKEIPESWPFHEPVNKKRVPDYYKKIKNPMDL 1425 (1563)
T ss_pred c--------------------------------chhhH-hhhhhHHHHHHhcchhcccccccchhhchHHHHHhcChhhH
Confidence 0 00011 23556777888889999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9598 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTV 220 (1915)
Q Consensus 161 ~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s~i~~~a~~l~~~f~~~~~~~~~ 220 (1915)
.||.+++..+.|.+..+|.+||+||+.||..||+.. +.+..-|+++-++....+.+...
T Consensus 1426 ~~i~~n~~~~~y~s~~e~l~dv~~i~~n~~~~ng~e-~~y~~k~~k~~ev~~~~~~e~~~ 1484 (1563)
T KOG0008|consen 1426 ETILKNIPPHKYDSRSEFLDDVNLIYVNSVEYNGAE-SAYTKKARKIGEVGLANLLEYIE 1484 (1563)
T ss_pred HHHhhcCCccccccHHHHhhhhHhhcccceeecCcc-ccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999965 87777777776666555544433
No 301
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.45 E-value=3e-12 Score=163.10 Aligned_cols=237 Identities=14% Similarity=0.117 Sum_probs=161.7
Q ss_pred CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCC---CeEEEEecccCccccceeccCccccccccC
Q psy9598 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD---GCIGFWKYKLDIDISKTVFHEPVMFNERIR 615 (1915)
Q Consensus 539 DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D---gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~ 615 (1915)
+..|.|||..... ...+..|...|.+++|+|+ ++.|+.++.+ ..|.+||+.++....... +
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPD----G~~la~~s~~~~~~~i~i~dl~tg~~~~l~~----------~- 246 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPD----GSKLAYVSFENKKSQLVVHDLRSGARKVVAS----------F- 246 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCC----CCEEEEEEecCCCcEEEEEeCCCCceEEEec----------C-
Confidence 4689999987554 5667778889999999994 4777777643 479999998764211111 1
Q ss_pred CCCCceEEEEECCCCcEEEEEe-CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEe-CCCcEEEEEcc
Q psy9598 616 PGNAHILCSSFSPGGLFLATGS-GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS-RDGTALIWYYK 693 (1915)
Q Consensus 616 ~~~~~V~~l~fspdg~~Lasgs-~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs-~DG~I~IWDl~ 693 (1915)
.+...+++|+|+|+.|++++ .+|.+.||.++... ..+..+..+...+.+++|+|+|..|+.++ .+|...||++.
T Consensus 247 --~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~--~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~ 322 (429)
T PRK01742 247 --RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANG--GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS 322 (429)
T ss_pred --CCccCceeECCCCCEEEEEEecCCcEEEEEEECCC--CCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 12234689999999888765 68877776553211 12344566777788999999999777555 67889999875
Q ss_pred CCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEc
Q psy9598 694 CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESH 773 (1915)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~s 773 (1915)
........ . .+.. .+++|+|+|++|++++. ++ +.+||+.++........+ ....+.|+
T Consensus 323 ~~~~~~~~------------l----~~~~--~~~~~SpDG~~ia~~~~-~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~s 380 (429)
T PRK01742 323 ASGGGASL------------V----GGRG--YSAQISADGKTLVMING-DN-VVKQDLTSGSTEVLSSTF--LDESPSIS 380 (429)
T ss_pred CCCCCeEE------------e----cCCC--CCccCCCCCCEEEEEcC-CC-EEEEECCCCCeEEecCCC--CCCCceEC
Confidence 43211000 0 0111 34689999999988876 54 566999988765433332 24567899
Q ss_pred cCCCCEEEEEecCceEEEEECC--CCccccceeeeeeecCCCCcceEEEEEcCC
Q psy9598 774 PFDSRVLLSAGHDGLIIIWDIL--SSKQRGYKWFHNIVEGQGEGALFDGKWSPD 825 (1915)
Q Consensus 774 p~dg~~LaSgs~DG~I~IWdl~--s~~~~~~~~~~~~~~~~~~~~V~~vafSpd 825 (1915)
| ++.+|++++.+|.+.+|.+. ++.. ...+. .+.+.+...+|||-
T Consensus 381 P-dG~~i~~~s~~g~~~~l~~~~~~G~~--~~~l~-----~~~g~~~~p~wsp~ 426 (429)
T PRK01742 381 P-NGIMIIYSSTQGLGKVLQLVSADGRF--KARLP-----GSDGQVKFPAWSPY 426 (429)
T ss_pred C-CCCEEEEEEcCCCceEEEEEECCCCc--eEEcc-----CCCCCCCCcccCCC
Confidence 9 99999999999999888864 3444 44443 34567888999984
No 302
>KOG2394|consensus
Probab=99.43 E-value=8.1e-12 Score=147.92 Aligned_cols=245 Identities=12% Similarity=0.127 Sum_probs=163.5
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE------EEEeCCCCCEEEEEE-----eCCCCEEEEEeCCCcEEEEE
Q psy9598 478 AVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL------ATLRGCSGEISDIAI-----DNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~------~~l~gH~~~I~~Laf-----spdg~~LaSgs~DgtIrVWD 546 (1915)
.++...++-.|.+|+..-.+ .+.||+...+..+ ..+.+ ...+|-+| .+.+--|+.|-.-|.|.+.|
T Consensus 125 ~~~~~~~~~~gd~lcFnvg~-~lyv~~~~g~~~~~~pi~k~~y~g--t~P~cHdfn~~~a~~~g~dllIGf~tGqvq~id 201 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFNVGR-ELYVYSYRGAADLSKPIDKREYKG--TSPTCHDFNSFTATPKGLDLLIGFTTGQVQLID 201 (636)
T ss_pred ceeeccccCCCCEEEEecCC-eEEEEEccCcchhccchhhhcccC--CCCceecccccccCCCCcceEEeeccCceEEec
Confidence 45555566667777655433 6888887643211 11222 22334444 34566788888889999888
Q ss_pred CCCCceEEEee----cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceE
Q psy9598 547 LQTLAPISVLV----GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622 (1915)
Q Consensus 547 l~tg~~~~~l~----~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 622 (1915)
.........+. -....|+||.|.| ++...++.+-.+|.+.+||..-.- . ..-.
T Consensus 202 p~~~~~sklfne~r~i~ktsvT~ikWvp---g~~~~Fl~a~~sGnlyly~~~~~~-------~-------------~t~p 258 (636)
T KOG2394|consen 202 PINFEVSKLFNEERLINKSSVTCIKWVP---GSDSLFLVAHASGNLYLYDKEIVC-------G-------------ATAP 258 (636)
T ss_pred chhhHHHHhhhhcccccccceEEEEEEe---CCCceEEEEEecCceEEeeccccc-------c-------------CCCC
Confidence 76522211111 1336899999999 356788888899999999862110 0 0111
Q ss_pred EEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 623 ~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
+....+++..++.... .-.... ..+..+.--.+.|..++|+|||.+||+.+.||.++|||+.+..++.
T Consensus 259 ~~~~~k~~~~f~i~t~-------ksk~~r--NPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg--- 326 (636)
T KOG2394|consen 259 SYQALKDGDQFAILTS-------KSKKTR--NPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLG--- 326 (636)
T ss_pred cccccCCCCeeEEeee-------eccccC--CccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHH---
Confidence 1222334444443322 111111 1222233345589999999999999999999999999998766322
Q ss_pred cccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
....--+...||+|||||+||++|+. |-.|.||.+...+.+..-+||.++|..|+|.|
T Consensus 327 -------------~mkSYFGGLLCvcWSPDGKyIvtGGE-DDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 327 -------------VMKSYFGGLLCVCWSPDGKYIVTGGE-DDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred -------------HHHhhccceEEEEEcCCccEEEecCC-cceEEEEEeccceEEEeccccccceeeEeecc
Confidence 12224467899999999999999999 99999999999999999999999999999987
No 303
>KOG1828|consensus
Probab=99.43 E-value=4.1e-14 Score=162.04 Aligned_cols=238 Identities=16% Similarity=0.182 Sum_probs=160.1
Q ss_pred HHHhcCCCccCCCCCCCCCCCCCccccccCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q psy9598 1382 LEEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARI 1461 (1915)
Q Consensus 1382 ~~~~~~~~~~~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na~~yN~~~s~i~~~a~~ 1461 (1915)
+.++.......-|..||.....|+|-+||..|||+.||+.+++.++|..+.+|..|+++|..||..||.+....+..|+.
T Consensus 28 lrkl~sKdp~q~fafplt~~map~y~~iis~Pmd~~t~r~kidd~~yl~L~~m~~d~kl~~~na~~yn~~~Tv~~~aaKr 107 (418)
T KOG1828|consen 28 LRKLPSKDPKQKFAFPLTDKMAPNYLEIISEPMDRITKRSKIDDTRYLVLSQMEFDRKLPDGNATLYNLHPTVPIVAAKR 107 (418)
T ss_pred HHhccccChhhhhccccchhhccchHhhhhcccccccccccCCCccceechhhhhhhcccccchhhhhcCCccccccccc
Confidence 34455667777899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhC--------CCC---------CCccch-------h--hhhcccccCCCC-------hhhhhhhhhhhccc
Q psy9598 1462 ITDLLLRIIKE--------PNP---------VDVPVV-------Y--HELLQNYETSSS-------EEEEEEDSKSRQRR 1508 (1915)
Q Consensus 1462 l~~~~~~~~~~--------~~~---------~~~~~~-------~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 1508 (1915)
|..+...+.+. +-. +.+-++ + ....+....+++ ++++..+..-.-..
T Consensus 108 L~~v~~~~~qe~~l~f~~~slg~y~~~rn~~~~v~~la~~~~sr~~~~d~~a~~s~ee~~l~v~~~e~~~~~~~~fs~k~ 187 (418)
T KOG1828|consen 108 LCPVRLGMTQERLLSFVNTSLGFYEDKRNKVTPVLYLAYGPYSRYHYDDTFANISKEESDLIVSTYEEDSDLPSDFSHKF 187 (418)
T ss_pred cchhhcchhhHHHHHhhhcccchhhhcccccCceeeeccCCccchhhhhhcCCCcccccccccccccccccccccccccc
Confidence 87775433332 100 000000 0 000000000000 00000000000000
Q ss_pred cCCcchhhhhHHHhhhhhcCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCC
Q psy9598 1509 VRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYE 1588 (1915)
Q Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~ 1588 (1915)
...... +...-.... .................+........|..+|....+|.|..+|++|+|++|++.|..++.|.
T Consensus 188 ~e~~~e-~~~~lgds~--g~lqtg~~~l~~~q~~kl~~~~p~~~lnyg~tas~aP~YSm~Ik~~~~~~Tygdk~~andy~ 264 (418)
T KOG1828|consen 188 LETCQE-RVVTLGDSV--GDLQTGGQQLQTLQEDKLNRVDPVAYLNYGPTASFAPGYSMTITEVEPPGTYGDKSSANDYE 264 (418)
T ss_pred cccCcc-ceEehhhhh--hhhccccHHHHHHHHHHhcccCchhhhcccchhhhcccccccccccCCCcchhhhhhhhhhh
Confidence 000000 000000000 00001111223334455566677889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHH
Q psy9598 1589 SPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624 (1915)
Q Consensus 1589 s~~ef~~Dv~lif~Na~~yN~~~~s~i~~~a~~l~~ 1624 (1915)
| -+|..|..||+-||++||.+. ..+|..|..+..
T Consensus 265 S-~~f~~D~kl~~l~amT~gehs-k~yyelank~lh 298 (418)
T KOG1828|consen 265 S-LSFTQDRKLIALKAVTNGEHS-KSYYELANKQLH 298 (418)
T ss_pred h-hhhhcccchhhHHHHhcCCcc-hHHHHHHHhhhh
Confidence 9 899999999999999999987 777887777655
No 304
>KOG2321|consensus
Probab=99.42 E-value=1.6e-11 Score=146.35 Aligned_cols=285 Identities=13% Similarity=0.127 Sum_probs=195.6
Q ss_pred CCCCcEEEEEEcCCCCEE-EEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q psy9598 474 GHLSAVFCVLFDKLGEVI-VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAP 552 (1915)
Q Consensus 474 gH~~~V~~vafspdg~~L-aTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~ 552 (1915)
+|....+.|..+|||+|| |||..--.|++||+....+...-.--...|.-.-++.|-..++.-..|.+|-+..-. |..
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~-G~h 127 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-GRH 127 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhc-Cee
Confidence 788999999999999985 567778899999997654433221123345555556665556666678877765432 211
Q ss_pred EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 553 ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 553 ~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
..+. -...-..++++-.. .-|++++....|.-+++..|..+..+... .+.+++|..++-..+
T Consensus 128 -y~~R-IP~~GRDm~y~~~s----cDly~~gsg~evYRlNLEqGrfL~P~~~~------------~~~lN~v~in~~hgL 189 (703)
T KOG2321|consen 128 -YRTR-IPKFGRDMKYHKPS----CDLYLVGSGSEVYRLNLEQGRFLNPFETD------------SGELNVVSINEEHGL 189 (703)
T ss_pred -eeee-cCcCCccccccCCC----ccEEEeecCcceEEEEccccccccccccc------------cccceeeeecCccce
Confidence 1111 11122455555422 33455555556777788887654433322 477999999999999
Q ss_pred EEEEeCCCeEEEEEecCCCCCceeE---EeccCCCC-----eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecc
Q psy9598 633 LATGSGDHHVRVYKMDGVDSPLGIL---EVEEHSDK-----VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 704 (1915)
Q Consensus 633 Lasgs~Dg~I~IwDl~~~~~~~~i~---~l~~h~~~-----V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~ 704 (1915)
|++|+.+|.|-+||.+.......+. .+..|.+. |++|.|+.+|-.+++|+.+|.|.|||+++.+...+
T Consensus 190 la~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~---- 265 (703)
T KOG2321|consen 190 LACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLV---- 265 (703)
T ss_pred EEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceee----
Confidence 9999999999999986433222111 12334443 99999999999999999999999999998774332
Q ss_pred cccCCCCccccccccccccEEEEEECCC--CCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEE
Q psy9598 705 NTCLPHTKETSDETNKKIKVTMVAWDAS--DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~V~~va~spd--g~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaS 782 (1915)
...+...+|..+.|.+. +..|++. . ...++|||-.+|+....+.... .++.+|+-| ++.++++
T Consensus 266 -----------kdh~~e~pi~~l~~~~~~~q~~v~S~-D-k~~~kiWd~~~Gk~~asiEpt~-~lND~C~~p-~sGm~f~ 330 (703)
T KOG2321|consen 266 -----------KDHGYELPIKKLDWQDTDQQNKVVSM-D-KRILKIWDECTGKPMASIEPTS-DLNDFCFVP-GSGMFFT 330 (703)
T ss_pred -----------cccCCccceeeecccccCCCceEEec-c-hHHhhhcccccCCceeeccccC-CcCceeeec-CCceEEE
Confidence 22345567888999765 3344444 3 5789999999999998887544 499999999 8889999
Q ss_pred EecCceEEEEECCC
Q psy9598 783 AGHDGLIIIWDILS 796 (1915)
Q Consensus 783 gs~DG~I~IWdl~s 796 (1915)
|-.++.+..|=+..
T Consensus 331 Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 331 ANESSKMHTYYIPS 344 (703)
T ss_pred ecCCCcceeEEccc
Confidence 98888777665544
No 305
>KOG2139|consensus
Probab=99.40 E-value=1e-10 Score=132.96 Aligned_cols=292 Identities=15% Similarity=0.166 Sum_probs=183.7
Q ss_pred CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEe-CCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCC----C
Q psy9598 477 SAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR-GCSGEISDIAIDNRN-ILLAAGTVDKTIRIWNLQT----L 550 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~-gH~~~I~~Lafspdg-~~LaSgs~DgtIrVWDl~t----g 550 (1915)
..+..++|++.-.-+|+++.|-.|+||+-.+ .+...++ .....|+||+|-|.+ .-|+.|+. +-|.||.... +
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccc
Confidence 4566788888666678888999999999766 4444443 235679999999964 46666665 4589998742 1
Q ss_pred ce----------EEEeecCCCCeEEEEeccCccCCCcEEEEEe-CCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 551 AP----------ISVLVGHQGIITGVNFCPLEVNGFNYLASTS-TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 551 ~~----------~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs-~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
.. +....|| ..|+++.|.++ +..|++++ .|..|.|||..++..+..... +.+
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~d----gt~l~tAS~gsssi~iWdpdtg~~~pL~~~------------glg 239 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNED----GTILVTASFGSSSIMIWDPDTGQKIPLIPK------------GLG 239 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCC----CCEEeecccCcceEEEEcCCCCCccccccc------------CCC
Confidence 11 1122344 68999999984 47778777 467899999999865433311 236
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCce--
Q psy9598 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQW-- 697 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~-- 697 (1915)
.+.-+.|||||.+|++++-|+..++|.....-..... .-..+.|...+|+|.|.+|+.++. |.-+||.+.....
T Consensus 240 g~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw---~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~ 315 (445)
T KOG2139|consen 240 GFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERW---ILGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDS 315 (445)
T ss_pred ceeeEEEcCCCCEEEEecccceeeeehhcccceecce---eccCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCc
Confidence 6888999999999999999999999976432222222 223458999999999997655443 3334554432211
Q ss_pred ----------EEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEec-------CCeEEEEECCCCceEEEe
Q psy9598 698 ----------RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF-------NFQIKIWDAFNGDLVQVL 760 (1915)
Q Consensus 698 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~-------Dg~I~vwD~~tg~~i~~l 760 (1915)
.....++..+ .......-..+.+.+++|+|.|.+|++.-.. -+.|.+||.+..-.+...
T Consensus 316 ~~~~~~~~k~~lliaDL~e~----ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels 391 (445)
T KOG2139|consen 316 VFLRPQSIKRVLLIADLQEV----TICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELS 391 (445)
T ss_pred cccCcccceeeeeeccchhh----hhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEE
Confidence 0001111100 0011122235778999999999999987641 123666776544333222
Q ss_pred e-CC--CCCeEEEEEccC--CCCEEEEEecCceEEEEECC
Q psy9598 761 K-GH--TNEVFVLESHPF--DSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 761 ~-gH--~~~V~sl~~sp~--dg~~LaSgs~DG~I~IWdl~ 795 (1915)
. |- ...-..|+|+|. ++.+|..|=..|.|.-|++.
T Consensus 392 ~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 392 YCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred ecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence 1 11 111344556553 45666666667777776653
No 306
>KOG2321|consensus
Probab=99.39 E-value=4.7e-11 Score=142.35 Aligned_cols=290 Identities=14% Similarity=0.133 Sum_probs=191.8
Q ss_pred CCCCCEEEEEEeCCCCEE-EEEeCCCcEEEEECCCCceEEEeecCC--CCeEEEEeccCccCCCcEEEEEeCCCeEEEEe
Q psy9598 516 GCSGEISDIAIDNRNILL-AAGTVDKTIRIWNLQTLAPISVLVGHQ--GIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~L-aSgs~DgtIrVWDl~tg~~~~~l~~h~--~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWD 592 (1915)
+|....+.|..+|||+|| |+|..--.|+|||+...... +..|. ..|.-+-.+. +...++.-..|.+|-+..
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLK--FERhlDae~V~feiLsD----D~SK~v~L~~DR~IefHa 122 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLK--FERHLDAEVVDFEILSD----DYSKSVFLQNDRTIEFHA 122 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceee--eeecccccceeEEEecc----chhhheEeecCceeeehh
Confidence 467788999999999976 56667889999999865443 33343 3343333333 335566666777776543
Q ss_pred cccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEc
Q psy9598 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS 672 (1915)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fs 672 (1915)
.-.. ...++- ...-..++++.-..-|++++....|+-+++ ..+..+..+....+.+++|..+
T Consensus 123 k~G~--------------hy~~RI-P~~GRDm~y~~~scDly~~gsg~evYRlNL---EqGrfL~P~~~~~~~lN~v~in 184 (703)
T KOG2321|consen 123 KYGR--------------HYRTRI-PKFGRDMKYHKPSCDLYLVGSGSEVYRLNL---EQGRFLNPFETDSGELNVVSIN 184 (703)
T ss_pred hcCe--------------eeeeec-CcCCccccccCCCccEEEeecCcceEEEEc---cccccccccccccccceeeeec
Confidence 2111 000000 011233444433333444445456666777 3444455556667899999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 673 HSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 673 pdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
+-..+|++|+.+|.|-.||.++...+... +.....+. .........|+++.|+.+|-.+++|++ +|.|.|||++
T Consensus 185 ~~hgLla~Gt~~g~VEfwDpR~ksrv~~l-~~~~~v~s----~pg~~~~~svTal~F~d~gL~~aVGts-~G~v~iyDLR 258 (703)
T KOG2321|consen 185 EEHGLLACGTEDGVVEFWDPRDKSRVGTL-DAASSVNS----HPGGDAAPSVTALKFRDDGLHVAVGTS-TGSVLIYDLR 258 (703)
T ss_pred CccceEEecccCceEEEecchhhhhheee-ecccccCC----CccccccCcceEEEecCCceeEEeecc-CCcEEEEEcc
Confidence 99999999999999999999877643322 11111111 112223456999999999999999999 9999999999
Q ss_pred CCceEEEee-CCCCCeEEEEEccCCC-CEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEE
Q psy9598 753 NGDLVQVLK-GHTNEVFVLESHPFDS-RVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830 (1915)
Q Consensus 753 tg~~i~~l~-gH~~~V~sl~~sp~dg-~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~La 830 (1915)
+.+++..-. +..-+|..+.|.+.++ ..|+|. ....++|||-.+|+. ...+. ....+.++|+-|++.+|+
T Consensus 259 a~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~--~asiE------pt~~lND~C~~p~sGm~f 329 (703)
T KOG2321|consen 259 ASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKP--MASIE------PTSDLNDFCFVPGSGMFF 329 (703)
T ss_pred cCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCc--eeecc------ccCCcCceeeecCCceEE
Confidence 988776543 3345789999987433 344444 456899999999988 54443 345589999999999999
Q ss_pred EEeCCCeEEEEeCC
Q psy9598 831 LTDSYGHLLVYGLG 844 (1915)
Q Consensus 831 sg~~dG~I~Iwdl~ 844 (1915)
++-.++.+..|=+.
T Consensus 330 ~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 330 TANESSKMHTYYIP 343 (703)
T ss_pred EecCCCcceeEEcc
Confidence 99888777665433
No 307
>KOG2111|consensus
Probab=99.38 E-value=4.2e-10 Score=126.83 Aligned_cols=239 Identities=18% Similarity=0.221 Sum_probs=161.2
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCC--eEEEEeccCccCCCcEEE-EEeCC------CeEEE
Q psy9598 520 EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGI--ITGVNFCPLEVNGFNYLA-STSTD------GCIGF 590 (1915)
Q Consensus 520 ~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~--V~sl~fsp~~~~d~~~L~-sgs~D------gtI~i 590 (1915)
...+++|+.|...+++|..+| .+||+++-.+.......+.+. +.-+-|-. ++|+ .|+.+ ..|.|
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~------N~laLVGGg~~pky~pNkviI 79 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRS------NYLALVGGGSRPKYPPNKVII 79 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhh------ceEEEecCCCCCCCCCceEEE
Confidence 455699999999999988666 899998764433322222222 22223322 3433 34333 47999
Q ss_pred EecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccC--CCCeeE
Q psy9598 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH--SDKVDS 668 (1915)
Q Consensus 591 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h--~~~V~s 668 (1915)
||=....++..+.+. ..|.++.+.++ .|++. ..+.|.||.... .+..+..+... ...+.+
T Consensus 80 WDD~k~~~i~el~f~-------------~~I~~V~l~r~--riVvv-l~~~I~VytF~~--n~k~l~~~et~~NPkGlC~ 141 (346)
T KOG2111|consen 80 WDDLKERCIIELSFN-------------SEIKAVKLRRD--RIVVV-LENKIYVYTFPD--NPKLLHVIETRSNPKGLCS 141 (346)
T ss_pred EecccCcEEEEEEec-------------cceeeEEEcCC--eEEEE-ecCeEEEEEcCC--ChhheeeeecccCCCceEe
Confidence 995555555555554 67888998876 45544 356899999842 23333333322 223333
Q ss_pred EEEcCCCCEEEE-EeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEE
Q psy9598 669 IQWSHSHLRFVS-GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIK 747 (1915)
Q Consensus 669 l~fspdg~~L~s-gs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~ 747 (1915)
++-+.+..+||. |-.-|.|+|-|+...... .......|...|.|++++.+|..|++++...-.|+
T Consensus 142 ~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~--------------~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIR 207 (346)
T KOG2111|consen 142 LCPTSNKSLLAFPGFKTGQVQIVDLASTKPN--------------APSIINAHDSDIACVALNLQGTLVATASTKGTLIR 207 (346)
T ss_pred ecCCCCceEEEcCCCccceEEEEEhhhcCcC--------------CceEEEcccCceeEEEEcCCccEEEEeccCcEEEE
Confidence 332223334443 445689999988755410 22334568999999999999999999999444589
Q ss_pred EEECCCCceEEEeeC--CCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCc
Q psy9598 748 IWDAFNGDLVQVLKG--HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798 (1915)
Q Consensus 748 vwD~~tg~~i~~l~g--H~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~ 798 (1915)
|||..+|.++..++- ....|++|+|+| +..+|+++|..|+|.||.+....
T Consensus 208 IFdt~~g~~l~E~RRG~d~A~iy~iaFSp-~~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 208 IFDTEDGTLLQELRRGVDRADIYCIAFSP-NSSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred EEEcCCCcEeeeeecCCchheEEEEEeCC-CccEEEEEcCCCeEEEEEeecCC
Confidence 999999999999973 234799999999 99999999999999999987643
No 308
>KOG1272|consensus
Probab=99.38 E-value=1.6e-12 Score=151.40 Aligned_cols=276 Identities=13% Similarity=0.128 Sum_probs=204.7
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc
Q psy9598 519 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598 (1915)
Q Consensus 519 ~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~ 598 (1915)
-.-..+.++.+|++|+.|+.-|.|-.+|+.++.+...+.- ...|.++.|... ..+++..+...+.|||-..- .
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHn-----eq~~AVAQK~y~yvYD~~Gt-E 202 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHN-----EQFFAVAQKKYVYVYDNNGT-E 202 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcc-----hHHHHhhhhceEEEecCCCc-E
Confidence 3456789999999999999999999999999998887753 456888899874 34555566788999985432 2
Q ss_pred ccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEE
Q psy9598 599 ISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678 (1915)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L 678 (1915)
+..+.- ...|..+.|-|..-+|++++..|.++.-|+ ..+..+..+....+.+..++-+|-...+
T Consensus 203 lHClk~-------------~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DV---S~GklVa~~~t~~G~~~vm~qNP~NaVi 266 (545)
T KOG1272|consen 203 LHCLKR-------------HIRVARLEFLPYHFLLVAASEAGFLKYQDV---STGKLVASIRTGAGRTDVMKQNPYNAVI 266 (545)
T ss_pred Eeehhh-------------cCchhhhcccchhheeeecccCCceEEEee---chhhhhHHHHccCCccchhhcCCccceE
Confidence 222221 256788999999889999999999999999 4445566667778889999999999899
Q ss_pred EEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEE
Q psy9598 679 VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758 (1915)
Q Consensus 679 ~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~ 758 (1915)
-+|...|+|.+|.....+. ......|.+.|.+|++.++|.|+++++. |..|+|||++....++
T Consensus 267 h~GhsnGtVSlWSP~skeP----------------LvKiLcH~g~V~siAv~~~G~YMaTtG~-Dr~~kIWDlR~~~ql~ 329 (545)
T KOG1272|consen 267 HLGHSNGTVSLWSPNSKEP----------------LVKILCHRGPVSSIAVDRGGRYMATTGL-DRKVKIWDLRNFYQLH 329 (545)
T ss_pred EEcCCCceEEecCCCCcch----------------HHHHHhcCCCcceEEECCCCcEEeeccc-ccceeEeeeccccccc
Confidence 9999999999997665542 1233458899999999999999999999 9999999999887777
Q ss_pred EeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEEC-CCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCe
Q psy9598 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGH 837 (1915)
Q Consensus 759 ~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl-~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~ 837 (1915)
++.. ..+...+++|. .-++++|....|.||.= ..+....-..+ +.....+.|.++.|.|-...|-+|...|.
T Consensus 330 t~~t-p~~a~~ls~Sq---kglLA~~~G~~v~iw~d~~~~s~~~~~pY---m~H~~~~~V~~l~FcP~EDvLGIGH~~G~ 402 (545)
T KOG1272|consen 330 TYRT-PHPASNLSLSQ---KGLLALSYGDHVQIWKDALKGSGHGETPY---MNHRCGGPVEDLRFCPYEDVLGIGHAGGI 402 (545)
T ss_pred eeec-CCCcccccccc---ccceeeecCCeeeeehhhhcCCCCCCcch---hhhccCcccccceeccHHHeeeccccCCc
Confidence 6654 34567788876 33455555568999943 22221001111 11122358999999998888888877665
Q ss_pred EEEE
Q psy9598 838 LLVY 841 (1915)
Q Consensus 838 I~Iw 841 (1915)
-.|.
T Consensus 403 tsil 406 (545)
T KOG1272|consen 403 TSIL 406 (545)
T ss_pred eeEe
Confidence 4443
No 309
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.36 E-value=4.5e-10 Score=133.15 Aligned_cols=331 Identities=16% Similarity=0.141 Sum_probs=217.6
Q ss_pred eeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCC------
Q psy9598 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDK------ 540 (1915)
Q Consensus 467 ~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~Dg------ 540 (1915)
..+.++..-.-++..++|||.|.+|++.... .|.+|....+..+..+. ...|..+.|+|.+.+|++-+..+
T Consensus 23 ~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~ 99 (561)
T COG5354 23 VIHTRFESENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEI 99 (561)
T ss_pred cccccccccCcchhheeecCcchheehhhcc-ceEEccccchhheeeee--cCCceecccCcccceeeeeccCCccChhh
Confidence 3334444466789999999999999988766 59999988877666665 35699999999999999976433
Q ss_pred ---------cEEEEECCCCceEEEeecCCCC--eE-EEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcc
Q psy9598 541 ---------TIRIWNLQTLAPISVLVGHQGI--IT-GVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV 608 (1915)
Q Consensus 541 ---------tIrVWDl~tg~~~~~l~~h~~~--V~-sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~ 608 (1915)
.+.|||+.+|..+..+.+-..+ .+ -+.|+-+. .+++-. -...+.|+++ ++.. ....+.
T Consensus 100 e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D----~y~ARv-v~~sl~i~e~-t~n~-~~~p~~--- 169 (561)
T COG5354 100 EISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDD----KYVARV-VGSSLYIHEI-TDNI-EEHPFK--- 169 (561)
T ss_pred ccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecc----hhhhhh-ccCeEEEEec-CCcc-ccCchh---
Confidence 4999999999999998876655 45 56776532 444433 3346889987 3321 111111
Q ss_pred ccccccCCCCCceEEEEECCCCc--EEEE-----EeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE
Q psy9598 609 MFNERIRPGNAHILCSSFSPGGL--FLAT-----GSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 681 (1915)
Q Consensus 609 ~~~~~~~~~~~~V~~l~fspdg~--~Las-----gs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg 681 (1915)
.+ ....|...+|+|.|+ .|+. ++..+.++||.+. .........+. ...-..+.|.+.|.+|++-
T Consensus 170 ----~l--r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp-~~s~l~tk~lf--k~~~~qLkW~~~g~~ll~l 240 (561)
T COG5354 170 ----NL--RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIP-KNSVLVTKNLF--KVSGVQLKWQVLGKYLLVL 240 (561)
T ss_pred ----hc--cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEcc-CCCeeeeeeeE--eecccEEEEecCCceEEEE
Confidence 00 124578888888643 2332 4667899999984 22222222221 1222456788888876543
Q ss_pred eC-----------CCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEE-ecCCeEEEE
Q psy9598 682 SR-----------DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI-NFNFQIKIW 749 (1915)
Q Consensus 682 s~-----------DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s-~~Dg~I~vw 749 (1915)
.. ...+.|+++....+. ......+.|..++|.|.+..+++.+ ..+..+.++
T Consensus 241 ~~t~~ksnKsyfgesnLyl~~~~e~~i~-----------------V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~ 303 (561)
T COG5354 241 VMTHTKSNKSYFGESNLYLLRITERSIP-----------------VEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVF 303 (561)
T ss_pred EEEeeecccceeccceEEEEeecccccc-----------------eeccccccceeeeecccCCceeEEecccccceeec
Confidence 21 133455554422211 1114568899999999887666554 457889999
Q ss_pred ECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecC---ceEEEEECCCCccccce-eeeeeecCCCCcceEEEEEcCC
Q psy9598 750 DAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD---GLIIIWDILSSKQRGYK-WFHNIVEGQGEGALFDGKWSPD 825 (1915)
Q Consensus 750 D~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D---G~I~IWdl~s~~~~~~~-~~~~~~~~~~~~~V~~vafSpd 825 (1915)
|++.. +...+ ....=+.+.|+| .+++++.+|-| |.|-|||...... .. .+. .....-|.|+||
T Consensus 304 ~lr~N-l~~~~--Pe~~rNT~~fsp-~~r~il~agF~nl~gni~i~~~~~rf~--~~~~~~-------~~n~s~~~wspd 370 (561)
T COG5354 304 DLRGN-LRFYF--PEQKRNTIFFSP-HERYILFAGFDNLQGNIEIFDPAGRFK--VAGAFN-------GLNTSYCDWSPD 370 (561)
T ss_pred ccccc-eEEec--CCcccccccccC-cccEEEEecCCccccceEEeccCCceE--EEEEee-------cCCceEeeccCC
Confidence 98755 44443 334446778999 88999988765 7899999976544 22 222 123455789999
Q ss_pred CCEEEEEe------CCCeEEEEeCCCCccc
Q psy9598 826 GTTCALTD------SYGHLLVYGLGGFKRP 849 (1915)
Q Consensus 826 g~~Lasg~------~dG~I~Iwdl~s~~~~ 849 (1915)
|.++.+.. .|..|.||++.+....
T Consensus 371 ~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f 400 (561)
T COG5354 371 GQFYDTDTTSEKLRVDNSIKLWDVYGAKVF 400 (561)
T ss_pred ceEEEecCCCcccccCcceEEEEecCchhh
Confidence 99988764 4678999999876543
No 310
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.35 E-value=2.9e-10 Score=140.64 Aligned_cols=310 Identities=16% Similarity=0.130 Sum_probs=195.7
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccc
Q psy9598 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFN 611 (1915)
Q Consensus 532 ~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~ 611 (1915)
++++-..++.|.|.|..+.+.+..+......-..+.|+| +++++++++.||.|.++|+.+.+.+......
T Consensus 8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~----Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G------ 77 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSP----DGRYLYVANRDGTVSVIDLATGKVVATIKVG------ 77 (369)
T ss_dssp EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-----SSEEEEEETTSEEEEEETTSSSEEEEEE-S------
T ss_pred EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecC----CCCEEEEEcCCCeEEEEECCcccEEEEEecC------
Confidence 345566789999999999999999986555455678888 4589999999999999999999876665544
Q ss_pred cccCCCCCceEEEEECCCCcEEEEEe-CCCeEEEEEecCCCCCceeEEecc-------CCCCeeEEEEcCCCCEEEEEeC
Q psy9598 612 ERIRPGNAHILCSSFSPGGLFLATGS-GDHHVRVYKMDGVDSPLGILEVEE-------HSDKVDSIQWSHSHLRFVSGSR 683 (1915)
Q Consensus 612 ~~~~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~IwDl~~~~~~~~i~~l~~-------h~~~V~sl~fspdg~~L~sgs~ 683 (1915)
....++++|++|+++++++ ..+.|.|+|..+ ...+..+.. ....+.+|..++....++.+-.
T Consensus 78 -------~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~t---le~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lk 147 (369)
T PF02239_consen 78 -------GNPRGIAVSPDGKYVYVANYEPGTVSVIDAET---LEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLK 147 (369)
T ss_dssp -------SEEEEEEE--TTTEEEEEEEETTEEEEEETTT-----EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEET
T ss_pred -------CCcceEEEcCCCCEEEEEecCCCceeEecccc---ccceeecccccccccccCCCceeEEecCCCCEEEEEEc
Confidence 5578899999999988775 589999999843 333433322 2346788888888887776666
Q ss_pred C-CcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-
Q psy9598 684 D-GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK- 761 (1915)
Q Consensus 684 D-G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~- 761 (1915)
| +.|.+-|+......... ............|+|+++|++++......|-++|..+++.+..+.
T Consensus 148 d~~~I~vVdy~d~~~~~~~---------------~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~ 212 (369)
T PF02239_consen 148 DTGEIWVVDYSDPKNLKVT---------------TIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDT 212 (369)
T ss_dssp TTTEEEEEETTTSSCEEEE---------------EEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-
T ss_pred cCCeEEEEEecccccccee---------------eecccccccccccCcccceeeecccccceeEEEeeccceEEEEeec
Confidence 5 77766676654321111 111223445689999999998887768899999999998887664
Q ss_pred ---CCCCCeEEEEEccCCC---------CEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEE
Q psy9598 762 ---GHTNEVFVLESHPFDS---------RVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTC 829 (1915)
Q Consensus 762 ---gH~~~V~sl~~sp~dg---------~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~L 829 (1915)
.|..++..+ .||..| ...++.-..+.+.+|+..+.+. +..+. ..+ +. .-+..||++++|
T Consensus 213 g~~p~~~~~~~~-php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkv--v~~I~----~~G-~g-lFi~thP~s~~v 283 (369)
T PF02239_consen 213 GKKPHPGPGANF-PHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKV--VKTIP----TQG-GG-LFIKTHPDSRYV 283 (369)
T ss_dssp SSSBEETTEEEE-EETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSE--EEEEE-----SS-SS---EE--TT-SEE
T ss_pred cccccccccccc-cCCCcceEEeeccccceecccccCCccccchhhcCeE--EEEEE----CCC-Cc-ceeecCCCCccE
Confidence 244444443 344121 2222222223455677766666 55554 222 22 667889999999
Q ss_pred EEE----eCCCeEEEEeCCCCcccccCC-------CceeecCCCCeee---ecCCCccceeecccCCCCC
Q psy9598 830 ALT----DSYGHLLVYGLGGFKRPQNIP-------RELFFHTDYRTLN---RPNGLFEPTYDEVTNLPPH 885 (1915)
Q Consensus 830 asg----~~dG~I~Iwdl~s~~~~~~l~-------~~~~F~~d~~~Lv---~~~~~~~~v~D~~t~~~p~ 885 (1915)
.+. ...+.|.|+|..+.+....+. .++-|+.||+.+- .+..+.+.+||..|.....
T Consensus 284 wvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~ 353 (369)
T PF02239_consen 284 WVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKK 353 (369)
T ss_dssp EEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred EeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEE
Confidence 998 455899999999987665552 2789999998664 3334357799988764433
No 311
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.35 E-value=1.7e-10 Score=146.86 Aligned_cols=236 Identities=13% Similarity=0.024 Sum_probs=157.7
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC---CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccC
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV---DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~---DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
..|.+||...+.. ..+..+...+.+.+|+|||+.|+..+. +..|.+|++.+|+.... ....+.+.++.|+|++
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG-- 254 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDG-- 254 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCC--
Confidence 3799999865544 344556778999999999999886542 45799999988864332 2233445578999954
Q ss_pred CCcEEEEE-eCCC--eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC-CeEEEEEecCC
Q psy9598 575 GFNYLAST-STDG--CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD-HHVRVYKMDGV 650 (1915)
Q Consensus 575 d~~~L~sg-s~Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D-g~I~IwDl~~~ 650 (1915)
..|+.. +.+| .|.+||+.++.... +..+...+...+|+|+|+.|+.++.+ |...||.++..
T Consensus 255 --~~La~~~~~~g~~~I~~~d~~tg~~~~-------------lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~ 319 (429)
T PRK03629 255 --SKLAFALSKTGSLNLYVMDLASGQIRQ-------------VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN 319 (429)
T ss_pred --CEEEEEEcCCCCcEEEEEECCCCCEEE-------------ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECC
Confidence 666544 5455 58888987764211 11122456788999999988776654 55556644221
Q ss_pred CCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC---CcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEE
Q psy9598 651 DSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD---GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV 727 (1915)
Q Consensus 651 ~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D---G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 727 (1915)
.. ....+..+...+.+.+|+|+|.+|+..+.+ ..|.+||+.++....+.. .......
T Consensus 320 ~g--~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~------------------~~~~~~p 379 (429)
T PRK03629 320 GG--APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTD------------------TFLDETP 379 (429)
T ss_pred CC--CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCC------------------CCCCCCc
Confidence 11 122333344456678999999998876544 358888988776432110 0112346
Q ss_pred EECCCCCEEEEEEecCC---eEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 728 AWDASDRWVITAINFNF---QIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 728 a~spdg~~L~t~s~~Dg---~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
.|+|||++|+.++. ++ .+.++++ +|.....+.+|.+.+...+|+|
T Consensus 380 ~~SpDG~~i~~~s~-~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 380 SIAPNGTMVIYSSS-QGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred eECCCCCEEEEEEc-CCCceEEEEEEC-CCCCeEECccCCCCcCCcccCC
Confidence 79999999999887 54 3677777 5777778888988999999998
No 312
>KOG2111|consensus
Probab=99.34 E-value=9.4e-10 Score=124.03 Aligned_cols=238 Identities=13% Similarity=0.144 Sum_probs=161.7
Q ss_pred EEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCC--EEEEEEeCCCCEEE-EEeCC------CcEEEEECCC
Q psy9598 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE--ISDIAIDNRNILLA-AGTVD------KTIRIWNLQT 549 (1915)
Q Consensus 479 V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~--I~~Lafspdg~~La-Sgs~D------gtIrVWDl~t 549 (1915)
..+++|+.|..-+++|..+| .+||++.-.+...+...+.+. |.-+-| ..++|| .||.+ ..|.|||=..
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD~k 84 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDDLK 84 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEeccc
Confidence 44599999998888887765 899998764443333223322 222222 223443 34433 4799999777
Q ss_pred CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc-cccceeccCccccccccCCCCCceEEEEECC
Q psy9598 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSP 628 (1915)
Q Consensus 550 g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~-~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp 628 (1915)
..++..+. ...+|.+|.+.+ ..|++.- .+.|.+|...... .+..+... .....+.+++-+.
T Consensus 85 ~~~i~el~-f~~~I~~V~l~r------~riVvvl-~~~I~VytF~~n~k~l~~~et~----------~NPkGlC~~~~~~ 146 (346)
T KOG2111|consen 85 ERCIIELS-FNSEIKAVKLRR------DRIVVVL-ENKIYVYTFPDNPKLLHVIETR----------SNPKGLCSLCPTS 146 (346)
T ss_pred CcEEEEEE-eccceeeEEEcC------CeEEEEe-cCeEEEEEcCCChhheeeeecc----------cCCCceEeecCCC
Confidence 77887775 567899999987 4555554 5679999887432 22111111 1112244444444
Q ss_pred CCcEEEE-EeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCc-EEEEEccCCceEEeeecccc
Q psy9598 629 GGLFLAT-GSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT-ALIWYYKCSQWRFIRLDMNT 706 (1915)
Q Consensus 629 dg~~Las-gs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~-I~IWDl~~~~~~~~~~~~~~ 706 (1915)
+..+||. |-.-|.|.|-|+..... .....+.+|.+.|.||+++-+|..+||+|..|+ |+|||..++..+.-..
T Consensus 147 ~k~~LafPg~k~GqvQi~dL~~~~~-~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~R---- 221 (346)
T KOG2111|consen 147 NKSLLAFPGFKTGQVQIVDLASTKP-NAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELR---- 221 (346)
T ss_pred CceEEEcCCCccceEEEEEhhhcCc-CCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeee----
Confidence 4445554 44568999999954332 133567899999999999999999999999998 7999999988654221
Q ss_pred cCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC
Q psy9598 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN 753 (1915)
Q Consensus 707 ~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t 753 (1915)
.......|.+++|||+..+|++++. .|+|+||.+..
T Consensus 222 ----------RG~d~A~iy~iaFSp~~s~LavsSd-KgTlHiF~l~~ 257 (346)
T KOG2111|consen 222 ----------RGVDRADIYCIAFSPNSSWLAVSSD-KGTLHIFSLRD 257 (346)
T ss_pred ----------cCCchheEEEEEeCCCccEEEEEcC-CCeEEEEEeec
Confidence 1224567999999999999999998 99999998864
No 313
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.34 E-value=4.6e-10 Score=142.91 Aligned_cols=235 Identities=14% Similarity=0.127 Sum_probs=152.0
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEe---CCCeEEEEecccCccccceeccCccccccccCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS---TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs---~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
..|.+||...... ..+..+...+.+.+|+|+ ++.|+..+ .+..|.+|++.++.......+
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPD----G~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~------------ 241 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPD----GSKLAYVTFESGRSALVIQTLANGAVRQVASF------------ 241 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCC----CCEEEEEEecCCCcEEEEEECCCCCeEEccCC------------
Confidence 3699999876544 344456778999999995 46776654 245789999887642111111
Q ss_pred CCCceEEEEECCCCcEEEEE-eCCC--eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC-CcEEEE--
Q psy9598 617 GNAHILCSSFSPGGLFLATG-SGDH--HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD-GTALIW-- 690 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~Lasg-s~Dg--~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D-G~I~IW-- 690 (1915)
.+.+..+.|+|||+.|+.. +.+| .|.+||+.+.. +..+..+...+...+|+|+|+.|+.++.+ |...||
T Consensus 242 -~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~----~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~ 316 (429)
T PRK03629 242 -PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKV 316 (429)
T ss_pred -CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC----EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEE
Confidence 1223467999999988765 4444 58888884321 23344455567889999999988776654 555555
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecC--CeEEEEECCCCceEEEeeCCCCCeE
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN--FQIKIWDAFNGDLVQVLKGHTNEVF 768 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~D--g~I~vwD~~tg~~i~~l~gH~~~V~ 768 (1915)
++.++....+. .....+...+|+|+|++|+.++..+ ..|.+||+.++... .+... ....
T Consensus 317 d~~~g~~~~lt-----------------~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~ 377 (429)
T PRK03629 317 NINGGAPQRIT-----------------WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDE 377 (429)
T ss_pred ECCCCCeEEee-----------------cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCC
Confidence 55444322111 1122345688999999998876523 36889999888654 33322 2234
Q ss_pred EEEEccCCCCEEEEEecCce---EEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 769 VLESHPFDSRVLLSAGHDGL---IIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 769 sl~~sp~dg~~LaSgs~DG~---I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
...|+| ||.+|+.++.++. +.+|++..... ..+. .+.+.+...+|+|
T Consensus 378 ~p~~Sp-DG~~i~~~s~~~~~~~l~~~~~~G~~~---~~l~-----~~~~~~~~p~Wsp 427 (429)
T PRK03629 378 TPSIAP-NGTMVIYSSSQGMGSVLNLVSTDGRFK---ARLP-----ATDGQVKFPAWSP 427 (429)
T ss_pred CceECC-CCCEEEEEEcCCCceEEEEEECCCCCe---EECc-----cCCCCcCCcccCC
Confidence 678999 9999999888764 67777754333 2222 2456788888987
No 314
>KOG1912|consensus
Probab=99.34 E-value=1.5e-10 Score=141.78 Aligned_cols=363 Identities=14% Similarity=0.137 Sum_probs=232.0
Q ss_pred CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCC------------CCEEEEEeCCCcEEE
Q psy9598 477 SAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR------------NILLAAGTVDKTIRI 544 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspd------------g~~LaSgs~DgtIrV 544 (1915)
+.-.++.|+|.| +||-|+.. .|.|-|..+.+.+.++..|...|+.+.|.|- .-+||++...|.|.|
T Consensus 16 sN~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil 93 (1062)
T KOG1912|consen 16 SNRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIIL 93 (1062)
T ss_pred ccccccccCccc-eEEEecCc-eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEE
Confidence 345678899876 77777755 8999999999999999999999999999773 126778888899999
Q ss_pred EECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccc----------c
Q psy9598 545 WNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNER----------I 614 (1915)
Q Consensus 545 WDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~----------~ 614 (1915)
||+..+..+..+..|..+|..++|.+........|++-....+|.+|+..+|...............-. +
T Consensus 94 ~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~ 173 (1062)
T KOG1912|consen 94 VDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCV 173 (1062)
T ss_pred EEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEE
Confidence 999999999999999999999999997644447788888889999999998876554433210000000 0
Q ss_pred CCCCCceEE-----------------------------------------------------EEECCCCcEEEEEeCCCe
Q psy9598 615 RPGNAHILC-----------------------------------------------------SSFSPGGLFLATGSGDHH 641 (1915)
Q Consensus 615 ~~~~~~V~~-----------------------------------------------------l~fspdg~~Lasgs~Dg~ 641 (1915)
.+..+.+.. ++|+|.-+.++.......
T Consensus 174 l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~pre 253 (1062)
T KOG1912|consen 174 LGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRE 253 (1062)
T ss_pred EccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccc
Confidence 000011111 123333222223333344
Q ss_pred EEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCC--EEEEEeCCCcEEEEEccC----------------CceEEeeec
Q psy9598 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL--RFVSGSRDGTALIWYYKC----------------SQWRFIRLD 703 (1915)
Q Consensus 642 I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~--~L~sgs~DG~I~IWDl~~----------------~~~~~~~~~ 703 (1915)
+.|+|+ .-..++....-..+.+.-+.+-|+++ .|+++..||.+.||-.+. +........
T Consensus 254 llv~dl---e~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~ 330 (1062)
T KOG1912|consen 254 LLVFDL---EYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRP 330 (1062)
T ss_pred eEEEcc---hhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEee
Confidence 455554 11222222222344455566666654 789999999999995443 110000000
Q ss_pred ccc-------cCCC----------------------------------------------------CccccccccccccE
Q psy9598 704 MNT-------CLPH----------------------------------------------------TKETSDETNKKIKV 724 (1915)
Q Consensus 704 ~~~-------~~~~----------------------------------------------------~~~~~~~~~~~~~V 724 (1915)
+.. +.+. .........|....
T Consensus 331 m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs 410 (1062)
T KOG1912|consen 331 MEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGS 410 (1062)
T ss_pred chhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCc
Confidence 000 0000 00000111223333
Q ss_pred EEEEECC-----------CCC-------EEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEe--
Q psy9598 725 TMVAWDA-----------SDR-------WVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG-- 784 (1915)
Q Consensus 725 ~~va~sp-----------dg~-------~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs-- 784 (1915)
+++...| .|+ .++.|.. .|+|.|+|+.++.....+..|.+.|.++.|.. .. .|++.+
T Consensus 411 ~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~-sGTV~vvdvst~~v~~~fsvht~~VkgleW~g-~s-slvSfsys 487 (1062)
T KOG1912|consen 411 TCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTN-SGTVDVVDVSTNAVAASFSVHTSLVKGLEWLG-NS-SLVSFSYS 487 (1062)
T ss_pred eeeecccCcccceeecCCCCCccceeeeeEEeecC-CceEEEEEecchhhhhhhcccccceeeeeecc-ce-eEEEeeec
Confidence 3332222 222 3455666 99999999999999999999999999999986 33 344433
Q ss_pred --------cCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccccc
Q psy9598 785 --------HDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQN 851 (1915)
Q Consensus 785 --------~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~ 851 (1915)
.-+.+.|-|+.+|.....+.+ .+....+|..+..|.-|++|+..-.+..+-||++.+..++..
T Consensus 488 ~~n~~sg~vrN~l~vtdLrtGlsk~fR~l----~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~ 558 (1062)
T KOG1912|consen 488 HVNSASGGVRNDLVVTDLRTGLSKRFRGL----QKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRL 558 (1062)
T ss_pred cccccccceeeeEEEEEcccccccccccC----CCCCcCcceeeeecccCceEEEEecccchHHHhhccchHHHH
Confidence 234577889998876333322 234557999999999999999999999999999977655443
No 315
>KOG1409|consensus
Probab=99.33 E-value=3.5e-11 Score=136.11 Aligned_cols=337 Identities=13% Similarity=0.165 Sum_probs=229.0
Q ss_pred eeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE-CCCCcEEEEEe-CCCCCEEEEEEeCCCCEEEEEeCCCcEE
Q psy9598 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR-ARDGKLLATLR-GCSGEISDIAIDNRNILLAAGTVDKTIR 543 (1915)
Q Consensus 466 ~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd-~~tg~~~~~l~-gH~~~I~~Lafspdg~~LaSgs~DgtIr 543 (1915)
..+.+.+.||.+.|+....-|-..-+++.+.|.+|+||- ...|+--..+. .-..+++++.+.++...|+.|-.+|++.
T Consensus 14 p~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvt 93 (404)
T KOG1409|consen 14 PELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVT 93 (404)
T ss_pred hhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEE
Confidence 334567889999999999999888899999999999995 34444333332 2356789999999999999999999999
Q ss_pred EEECC----CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 544 IWNLQ----TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 544 VWDl~----tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
-+.+. ....+.....|.+.|..+.|+-.. ..+++++.|..+..--.+.+..+....+..+.
T Consensus 94 efs~sedfnkm~~~r~~~~h~~~v~~~if~~~~----e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~----------- 158 (404)
T KOG1409|consen 94 EFALSEDFNKMTFLKDYLAHQARVSAIVFSLTH----EWVLSTGKDKQFAWHCTESGNRLGGYNFETPA----------- 158 (404)
T ss_pred EEEhhhhhhhcchhhhhhhhhcceeeEEecCCc----eeEEEeccccceEEEeeccCCcccceEeeccC-----------
Confidence 88764 344556667899999999998744 89999999988766555555444333332111
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEE
Q psy9598 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRF 699 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~ 699 (1915)
+++.|.-. +...|...|.|.+..+. ......+..+.+|.+.+.+++|.+....|++|..|..|.+||+....-..
T Consensus 159 --t~~~~d~~--~~fvGd~~gqvt~lr~~-~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~ 233 (404)
T KOG1409|consen 159 --SALQFDAL--YAFVGDHSGQITMLKLE-QNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTA 233 (404)
T ss_pred --CCCceeeE--EEEecccccceEEEEEe-ecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCccee
Confidence 11111111 55566667777776663 34566788899999999999999999999999999999999987654222
Q ss_pred eeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEE---------------------
Q psy9598 700 IRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ--------------------- 758 (1915)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~--------------------- 758 (1915)
....+|...|..++.-+--+.+++++. ||.|-+|+........
T Consensus 234 ---------------~el~gh~~kV~~l~~~~~t~~l~S~~e-dg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~ 297 (404)
T KOG1409|consen 234 ---------------YELQGHNDKVQALSYAQHTRQLISCGE-DGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFR 297 (404)
T ss_pred ---------------eeeccchhhhhhhhhhhhheeeeeccC-CCeEEEEeccceeecCccccccchhhhhCchHHHHHH
Confidence 123456677777777777778888888 9999999986321100
Q ss_pred --------EeeCC----C-CCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc-----ccceeeeeeecCCCCcceEEE
Q psy9598 759 --------VLKGH----T-NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-----RGYKWFHNIVEGQGEGALFDG 820 (1915)
Q Consensus 759 --------~l~gH----~-~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~-----~~~~~~~~~~~~~~~~~V~~v 820 (1915)
-+..| . ..|...+-+ ......+-|..-.+++-|--.... ..+..++ ..+..|+.+
T Consensus 298 ~m~~~k~~glr~h~crkcg~avc~~c~s--~~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~ph-----ei~tgItam 370 (404)
T KOG1409|consen 298 QMWDRKQLGLRQHHCRKCGKAVCGKCSS--NRSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPH-----EIKTGITAM 370 (404)
T ss_pred HHHhhhhhhhhhhhhhhhhhhcCccccc--CccccccccceeEEEEecccchhhhcCCCCcccccc-----ccccceeEE
Confidence 00111 1 122222211 122233333333445444321111 1123232 334578899
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 821 KWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 821 afSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
.+..+-.+|++++.|..|+|||+.+
T Consensus 371 hlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 371 HLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred EhhhhccceeecCCceEEEEEechh
Confidence 9999999999999999999999875
No 316
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.32 E-value=2.1e-10 Score=146.51 Aligned_cols=235 Identities=14% Similarity=0.095 Sum_probs=151.8
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC---CCeEEEEecccCccccceeccCccccccccCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST---DGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~---DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
..|.|||... .....+..|...+.+.+|+|+ ++.|+.++. ...|.+||+.++...... .
T Consensus 184 ~~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpD----g~~la~~s~~~~~~~l~~~dl~~g~~~~l~-------------~ 245 (433)
T PRK04922 184 YALQVADSDG-YNPQTILRSAEPILSPAWSPD----GKKLAYVSFERGRSAIYVQDLATGQRELVA-------------S 245 (433)
T ss_pred EEEEEECCCC-CCceEeecCCCccccccCCCC----CCEEEEEecCCCCcEEEEEECCCCCEEEec-------------c
Confidence 4699999864 444556667778999999994 477777764 346999999876431111 1
Q ss_pred CCCceEEEEECCCCcEEE-EEeCCC--eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEe-CCCc--EEEE
Q psy9598 617 GNAHILCSSFSPGGLFLA-TGSGDH--HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS-RDGT--ALIW 690 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~La-sgs~Dg--~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs-~DG~--I~IW 690 (1915)
..+...++.|+|+|+.|+ +.+.+| .|++||+.+.. +..+..+......++|+|+|..|+.++ .+|. |.++
T Consensus 246 ~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~----~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~ 321 (433)
T PRK04922 246 FRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ----LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRV 321 (433)
T ss_pred CCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC----eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 113345789999998775 445555 58888884322 334455555567889999999888766 4555 5555
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeE
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVF 768 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~ 768 (1915)
++.+++...+.. .......++|+|+|++|+.++..++ .|.+||+.++... .+. +.....
T Consensus 322 dl~~g~~~~lt~-----------------~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~ 382 (433)
T PRK04922 322 AASGGSAERLTF-----------------QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDE 382 (433)
T ss_pred ECCCCCeEEeec-----------------CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCC
Confidence 665555332110 1122345899999999988765232 6999999888765 333 323455
Q ss_pred EEEEccCCCCEEEEEecC---ceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 769 VLESHPFDSRVLLSAGHD---GLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 769 sl~~sp~dg~~LaSgs~D---G~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
...|+| ++++|+..+.+ +.|.+|++..+.. ..+. .+.+.+...+|+|
T Consensus 383 ~p~~sp-dG~~i~~~s~~~g~~~L~~~~~~g~~~---~~l~-----~~~g~~~~p~wsp 432 (433)
T PRK04922 383 SPSFAP-NGSMVLYATREGGRGVLAAVSTDGRVR---QRLV-----SADGEVREPAWSP 432 (433)
T ss_pred CceECC-CCCEEEEEEecCCceEEEEEECCCCce---EEcc-----cCCCCCCCCccCC
Confidence 678999 88877766653 4678888854332 2221 2335667778876
No 317
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.32 E-value=2e-10 Score=146.38 Aligned_cols=239 Identities=15% Similarity=0.114 Sum_probs=158.5
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCceEEEeecCCCCeEEEEeccCccC
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD---KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D---gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
..|.+||. +|.....+..+...+.+.+|+|||+.|+.++.+ ..|.+||+.++.... +....+.+.+.+|+|++
T Consensus 176 ~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG-- 251 (427)
T PRK02889 176 YQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDG-- 251 (427)
T ss_pred cEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC--
Confidence 46777786 455555566788889999999999999887643 459999999887643 33344566789999953
Q ss_pred CCcEE-EEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CCeEEEEEecCCCC
Q psy9598 575 GFNYL-ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DHHVRVYKMDGVDS 652 (1915)
Q Consensus 575 d~~~L-~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~I~IwDl~~~~~ 652 (1915)
..| ++.+.+|...||.+....... ..+..+.......+|+|||+.|+..+. +|...||.+.....
T Consensus 252 --~~la~~~~~~g~~~Iy~~d~~~~~~-----------~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g 318 (427)
T PRK02889 252 --RTLAVALSRDGNSQIYTVNADGSGL-----------RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGG 318 (427)
T ss_pred --CEEEEEEccCCCceEEEEECCCCCc-----------EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCC
Confidence 555 467788887777654321100 011122234556789999998876554 46777777642222
Q ss_pred CceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEE
Q psy9598 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG---TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAW 729 (1915)
Q Consensus 653 ~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG---~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~ 729 (1915)
......+ +.......+|+|+|++|+.++.++ .|.+||+.++....+. ........+|
T Consensus 319 ~~~~lt~--~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt------------------~~~~~~~p~~ 378 (427)
T PRK02889 319 AAQRVTF--TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALT------------------DTTRDESPSF 378 (427)
T ss_pred ceEEEec--CCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEcc------------------CCCCccCceE
Confidence 1112222 223345678999999998777654 5999999887643211 0011245789
Q ss_pred CCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 730 DASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 730 spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
+|+|+.|+.++...| .+.+.++ +|.....+..+.+.+...+|+|
T Consensus 379 spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 379 APNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred CCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCC
Confidence 999999998886344 3566666 5777777777778888888988
No 318
>KOG3881|consensus
Probab=99.31 E-value=8.8e-11 Score=135.33 Aligned_cols=247 Identities=16% Similarity=0.209 Sum_probs=177.7
Q ss_pred CCCEEEEEEeCCCC--EEEEEeCCCcEEEEECCCCceEEE------eecCCCCeEEEEeccCccCCCcEEEEEeCCCeEE
Q psy9598 518 SGEISDIAIDNRNI--LLAAGTVDKTIRIWNLQTLAPISV------LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 518 ~~~I~~Lafspdg~--~LaSgs~DgtIrVWDl~tg~~~~~------l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~ 589 (1915)
...|+.++|.-+++ .|...+.|..+..+.+..+.+... ....+++|-.++... ..|++|-.+|.+.
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~d------g~Litc~~sG~l~ 128 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLAD------GTLITCVSSGNLQ 128 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcC------CEEEEEecCCcEE
Confidence 34577777765543 455555666677766665444333 334567777777765 6889999999999
Q ss_pred EEecccCccccceeccCccccccccCCCCCceEEEEECCCCc-EEEEEeCC--CeEEEEEecCCCCCceeEEeccC----
Q psy9598 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL-FLATGSGD--HHVRVYKMDGVDSPLGILEVEEH---- 662 (1915)
Q Consensus 590 iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~-~Lasgs~D--g~I~IwDl~~~~~~~~i~~l~~h---- 662 (1915)
+|....+....... ..+.. ...+..+.-++... ++++||.. ..+.|||+... ..+..-..-
T Consensus 129 ~~~~k~~d~hss~l--------~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~---~qiw~aKNvpnD~ 196 (412)
T KOG3881|consen 129 VRHDKSGDLHSSKL--------IKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS---KQIWSAKNVPNDR 196 (412)
T ss_pred EEeccCCccccccc--------eeeec-CCceeeeccCCCCCceEecCchhcccceeeeecccc---eeeeeccCCCCcc
Confidence 99988553210000 00111 14455566666444 55668888 78999999533 333332221
Q ss_pred -----CCCeeEEEEcCC--CCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCE
Q psy9598 663 -----SDKVDSIQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 735 (1915)
Q Consensus 663 -----~~~V~sl~fspd--g~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~ 735 (1915)
.-.++++.|-+. ...|++++.-+.|++||.+.+.... .........|+++...|+|++
T Consensus 197 L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV---------------~~fd~~E~~is~~~l~p~gn~ 261 (412)
T KOG3881|consen 197 LGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPV---------------AQFDFLENPISSTGLTPSGNF 261 (412)
T ss_pred ccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcce---------------eEeccccCcceeeeecCCCcE
Confidence 124677889887 7899999999999999998665222 122234678999999999999
Q ss_pred EEEEEecCCeEEEEECCCCceEEE-eeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 736 VITAINFNFQIKIWDAFNGDLVQV-LKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 736 L~t~s~~Dg~I~vwD~~tg~~i~~-l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
|++|.. -|.+..||++.+.++.. +.|-.+.|.+|..|| ...+|++||-|..|+|+|+.+.++
T Consensus 262 Iy~gn~-~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp-~~~~las~GLDRyvRIhD~ktrkl 324 (412)
T KOG3881|consen 262 IYTGNT-KGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHP-THPVLASCGLDRYVRIHDIKTRKL 324 (412)
T ss_pred EEEecc-cchhheecccCceeeccccCCccCCcceEEEcC-CCceEEeeccceeEEEeecccchh
Confidence 999988 99999999999998887 889999999999999 889999999999999999998665
No 319
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=3.1e-10 Score=145.04 Aligned_cols=235 Identities=14% Similarity=0.029 Sum_probs=155.8
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCceEEEeecCCCCeEEEEeccCccC
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD---KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D---gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
..|.|||.. +.....+..|...|.+.+|+|||+.|+.++.. ..|.+||+.++.... +..+.+...++.|+|++
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG-- 259 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDG-- 259 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCC--
Confidence 469999985 44445566677889999999999999987743 469999998887543 33445556688999953
Q ss_pred CCcEE-EEEeCCC--eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CCe--EEEEEec
Q psy9598 575 GFNYL-ASTSTDG--CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DHH--VRVYKMD 648 (1915)
Q Consensus 575 d~~~L-~sgs~Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~--I~IwDl~ 648 (1915)
..| ++.+.+| .|.+||+.++.... + ..+.......+|+|+|+.|+.++. +|. |.++++.
T Consensus 260 --~~l~~~~s~~g~~~Iy~~d~~~g~~~~-l------------t~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~ 324 (433)
T PRK04922 260 --RRLALTLSRDGNPEIYVMDLGSRQLTR-L------------TNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS 324 (433)
T ss_pred --CEEEEEEeCCCCceEEEEECCCCCeEE-C------------ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 544 5556665 58889988764211 1 112233456899999998887664 455 5555553
Q ss_pred CCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEEccCCceEEeeecccccCCCCccccccccccccEE
Q psy9598 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG---TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVT 725 (1915)
Q Consensus 649 ~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG---~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 725 (1915)
+. . ...+..+......++|+|+|.+|+..+.++ .|.+||+.++....+. +.....
T Consensus 325 ~g-~---~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt------------------~~~~~~ 382 (433)
T PRK04922 325 GG-S---AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLT------------------PGSLDE 382 (433)
T ss_pred CC-C---eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECC------------------CCCCCC
Confidence 22 1 112222333455789999999988765443 5899998877643211 001123
Q ss_pred EEEECCCCCEEEEEEecC--CeEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 726 MVAWDASDRWVITAINFN--FQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 726 ~va~spdg~~L~t~s~~D--g~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
..+|+|+|++|+.++... +.|.++++. +.....+..+.+.+...+|+|
T Consensus 383 ~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 383 SPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred CceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence 468999999988777522 358888884 555666666667788888887
No 320
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=7.8e-10 Score=141.58 Aligned_cols=235 Identities=13% Similarity=0.075 Sum_probs=155.8
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC---CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccC
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV---DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~---DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
..|.+||.. |.....+..|...|.+.+|+|||+.|+..+. +..|.+||+.++... .+..+.+.+.+.+|+|++
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG-- 257 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDG-- 257 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCC--
Confidence 378899974 4555667778889999999999999888763 468999999988753 455566778899999953
Q ss_pred CCcEEEEEeCCCe--EEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CC--eEEEEEecC
Q psy9598 575 GFNYLASTSTDGC--IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DH--HVRVYKMDG 649 (1915)
Q Consensus 575 d~~~L~sgs~Dgt--I~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg--~I~IwDl~~ 649 (1915)
..++++.+.+|. |.+||+.++... . +..+.....+.+|+|+|..|+..+. +| .|++||+.+
T Consensus 258 -~~la~~~~~~g~~~Iy~~d~~~~~~~-~------------Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g 323 (435)
T PRK05137 258 -RKVVMSLSQGGNTDIYTMDLRSGTTT-R------------LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG 323 (435)
T ss_pred -CEEEEEEecCCCceEEEEECCCCceE-E------------ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCC
Confidence 234456666665 666677665321 1 1122344567899999998887664 33 577777643
Q ss_pred CCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC---CcEEEEEccCCceEEeeecccccCCCCccccccccccccEEE
Q psy9598 650 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD---GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTM 726 (1915)
Q Consensus 650 ~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D---G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 726 (1915)
. . ...+..+.+.+....|+|+|..|+..+.+ ..|.+||+.++....+. ....+..
T Consensus 324 ~-~---~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt------------------~~~~~~~ 381 (435)
T PRK05137 324 S-N---PRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILT------------------SGFLVEG 381 (435)
T ss_pred C-C---eEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceEecc------------------CCCCCCC
Confidence 2 1 22233345556778899999998877654 25777777554322110 0112456
Q ss_pred EEECCCCCEEEEEEecC-----CeEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 727 VAWDASDRWVITAINFN-----FQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 727 va~spdg~~L~t~s~~D-----g~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
+.|+|||+.|+..+... ..|+++|+..+.. ..+. ..+.+...+|+|
T Consensus 382 p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 382 PTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP-TPGDASDPAWSP 432 (435)
T ss_pred CeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc-CCCCccCcccCC
Confidence 89999999988766522 3688888865544 4444 344567777877
No 321
>KOG0974|consensus
Probab=99.27 E-value=4.7e-10 Score=143.23 Aligned_cols=141 Identities=19% Similarity=0.226 Sum_probs=121.7
Q ss_pred cccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE-EEeCCCCCEEEEE
Q psy9598 447 EYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIA 525 (1915)
Q Consensus 447 ~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~-~l~gH~~~I~~La 525 (1915)
.++|..-+.+++|.....+... .+.||.+.|.++.|+-||+++|+.|+|.+|++|++.+++... +.-||++.|..++
T Consensus 148 i~~gsv~~~iivW~~~~dn~p~--~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~ 225 (967)
T KOG0974|consen 148 IASGSVFGEIIVWKPHEDNKPI--RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACC 225 (967)
T ss_pred EEeccccccEEEEeccccCCcc--eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEE
Confidence 3467788899999877444333 789999999999999999999999999999999999997766 7779999999999
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCC-CeEEEEeccCccCCCcEEEEEeCCCeEEEEecccC
Q psy9598 526 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQG-IITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLD 596 (1915)
Q Consensus 526 fspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~-~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~ 596 (1915)
|.+. .|+|++.|.+.++|+.. +..+..+.+|.+ .|+.++..+. ...+++++.||.+++|++...
T Consensus 226 ~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~----~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 226 FLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIG----VIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred eccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCC----ceEEEeeccCcchhhhhhhcc
Confidence 9998 99999999999999765 455568888874 7999999884 489999999999999998654
No 322
>KOG2394|consensus
Probab=99.26 E-value=1.2e-10 Score=138.27 Aligned_cols=193 Identities=17% Similarity=0.257 Sum_probs=142.0
Q ss_pred CCCCEEEEEECCCcEEEEECCCCcEEEEEe----CCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCC-----------
Q psy9598 486 KLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNRN-ILLAAGTVDKTIRIWNLQT----------- 549 (1915)
Q Consensus 486 pdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~----gH~~~I~~Lafspdg-~~LaSgs~DgtIrVWDl~t----------- 549 (1915)
+.|--|+.|-..|.|.+.|.........+. -....|+||.|-|.+ ..++++-.+|.+.++|..-
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~ 262 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA 262 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence 567778888888899988876532211111 123689999998854 3555566789999997631
Q ss_pred ---C--------------ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcccccc
Q psy9598 550 ---L--------------APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE 612 (1915)
Q Consensus 550 ---g--------------~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~ 612 (1915)
+ .++..+.-..+.|+.++|+| ++.+|++.|.||.++|||..+...+..+.
T Consensus 263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~----DG~~LA~VSqDGfLRvF~fdt~eLlg~mk--------- 329 (636)
T KOG2394|consen 263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSP----DGKYLATVSQDGFLRIFDFDTQELLGVMK--------- 329 (636)
T ss_pred cCCCCeeEEeeeeccccCCccceeEeccccccceeEcC----CCceEEEEecCceEEEeeccHHHHHHHHH---------
Confidence 1 12222333446788999998 56999999999999999998775432221
Q ss_pred ccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC-------------------
Q psy9598 613 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH------------------- 673 (1915)
Q Consensus 613 ~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp------------------- 673 (1915)
.--+...|++|||||++|++|+.|-.|.||.+ .....+..-++|.++|..|+|.|
T Consensus 330 ---SYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf---~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~ 403 (636)
T KOG2394|consen 330 ---SYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSF---EERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFS 403 (636)
T ss_pred ---hhccceEEEEEcCCccEEEecCCcceEEEEEe---ccceEEEeccccccceeeEeeccccccccccccccccccccc
Confidence 12367899999999999999999999999999 44566777789999999999982
Q ss_pred ------------C----C-------------CEEEEEeCCCcEEEEEccCCce
Q psy9598 674 ------------S----H-------------LRFVSGSRDGTALIWYYKCSQW 697 (1915)
Q Consensus 674 ------------d----g-------------~~L~sgs~DG~I~IWDl~~~~~ 697 (1915)
+ + -+|.+.+.|..+.+||+.....
T Consensus 404 ~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L 456 (636)
T KOG2394|consen 404 DVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTEDVL 456 (636)
T ss_pred chhcccccccCCCCCcCCCcccccccccceEEEeecccccceEEEEecchhhc
Confidence 0 1 1577889999999999986553
No 323
>KOG1354|consensus
Probab=99.26 E-value=2e-10 Score=129.68 Aligned_cols=269 Identities=18% Similarity=0.225 Sum_probs=169.4
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc-----EEEEEeCCC------------CCEEEEEEeCCCC--EEEEE
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK-----LLATLRGCS------------GEISDIAIDNRNI--LLAAG 536 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~-----~~~~l~gH~------------~~I~~Lafspdg~--~LaSg 536 (1915)
.+-|.||.|+.+|.+||||..+|.|.+|.-.... ....+..|. ..|+.|.|.++++ .++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4678999999999999999999999999643221 344555564 3588899988754 55566
Q ss_pred eCCCcEEEEECCCCc-----------------------------------eEEEe-ecCCCCeEEEEeccCccCCCcEEE
Q psy9598 537 TVDKTIRIWNLQTLA-----------------------------------PISVL-VGHQGIITGVNFCPLEVNGFNYLA 580 (1915)
Q Consensus 537 s~DgtIrVWDl~tg~-----------------------------------~~~~l-~~h~~~V~sl~fsp~~~~d~~~L~ 580 (1915)
+.|.+|++|.+.... |...+ .+|+..|++|.++.+ ..+++
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD----~Et~l 180 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSD----KETFL 180 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCc----cceEe
Confidence 779999999875210 01111 257888999999874 36666
Q ss_pred EEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEEEEEeCCCeEEEEEecCCCCC---cee
Q psy9598 581 STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFLATGSGDHHVRVYKMDGVDSP---LGI 656 (1915)
Q Consensus 581 sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~~~~~---~~i 656 (1915)
++ .|=.|.+|++.-......+.--.|..+.. -..-|++..|+|. .+.++-.+..|+|++.|++...-. ..+
T Consensus 181 SA-DdLRINLWnlei~d~sFnIVDIKP~nmEe----LteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKl 255 (433)
T KOG1354|consen 181 SA-DDLRINLWNLEIIDQSFNIVDIKPANMEE----LTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKL 255 (433)
T ss_pred ec-cceeeeeccccccCCceeEEEccccCHHH----HHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhh
Confidence 55 46789999886543222221112221111 1245788889995 457778888999999999632111 111
Q ss_pred E----------EeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEE
Q psy9598 657 L----------EVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTM 726 (1915)
Q Consensus 657 ~----------~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 726 (1915)
. -+.+--..|..|.|+++|+++++-.. -+|+|||+...........+...+.......-.......-..
T Consensus 256 fEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFe 334 (433)
T KOG1354|consen 256 FEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFE 334 (433)
T ss_pred hccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeE
Confidence 1 11222356888999999999987643 689999985433111111111100000000001111122346
Q ss_pred EEECCCCCEEEEEEecCCeEEEEECCCCc
Q psy9598 727 VAWDASDRWVITAINFNFQIKIWDAFNGD 755 (1915)
Q Consensus 727 va~spdg~~L~t~s~~Dg~I~vwD~~tg~ 755 (1915)
++|+.++.++++|+. ...+++|++..|.
T Consensus 335 c~~sg~~~~v~TGsy-~n~frvf~~~~gs 362 (433)
T KOG1354|consen 335 CSWSGNDSYVMTGSY-NNVFRVFNLARGS 362 (433)
T ss_pred EEEcCCcceEecccc-cceEEEecCCCCc
Confidence 899999999999998 8999999976553
No 324
>KOG0974|consensus
Probab=99.25 E-value=1.3e-09 Score=139.40 Aligned_cols=183 Identities=17% Similarity=0.214 Sum_probs=139.9
Q ss_pred CccccccCCCeEEEecccCCceeeeEEecCCCCc-----EEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCC
Q psy9598 445 SREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSA-----VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSG 519 (1915)
Q Consensus 445 ~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~-----V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~ 519 (1915)
.+.+.+..++.+.++++.-..+-. .+ .|... ..-+.++++.-++++|+.-+.|.+|....-+.-..+.||.+
T Consensus 100 k~i~l~~~~ns~~i~d~~~~~~~~--~i-~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG 176 (967)
T KOG0974|consen 100 KKIALVTSRNSLLIRDSKNSSVLS--KI-QSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG 176 (967)
T ss_pred ceEEEEEcCceEEEEecccCceeh--hc-CCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCC
Confidence 344556667777777654433221 12 22221 22233577788999999999999999874433336899999
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEE-EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc
Q psy9598 520 EISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598 (1915)
Q Consensus 520 ~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~-~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~ 598 (1915)
.|.++.|+.||.++++.|.|.+||+|++.+.+... +..+|++.|+.+.|.| +.+++++.|.+.++|+......
T Consensus 177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~------n~i~t~gedctcrvW~~~~~~l 250 (967)
T KOG0974|consen 177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLP------NRIITVGEDCTCRVWGVNGTQL 250 (967)
T ss_pred ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEecc------ceeEEeccceEEEEEeccccee
Confidence 99999999999999999999999999999988766 7779999999999998 5999999999999997654422
Q ss_pred ccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEec
Q psy9598 599 ISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648 (1915)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~ 648 (1915)
..+. ... ...|..++..++...++|++.||.+++|++.
T Consensus 251 -~~y~--------~h~---g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 251 -EVYD--------EHS---GKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred -hhhh--------hhh---hcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence 1111 111 2458899999999999999999999999985
No 325
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.23 E-value=4.8e-08 Score=121.12 Aligned_cols=295 Identities=16% Similarity=0.132 Sum_probs=182.6
Q ss_pred EEEEECC----CcEEEEEC--CCCcEE--EEEeCCCCCEEEEEEeCCCCEEEEEeC----CCcEEEEECCCC--ce--EE
Q psy9598 491 IVTGADD----LLIKLWRA--RDGKLL--ATLRGCSGEISDIAIDNRNILLAAGTV----DKTIRIWNLQTL--AP--IS 554 (1915)
Q Consensus 491 LaTGs~D----g~I~IWd~--~tg~~~--~~l~gH~~~I~~Lafspdg~~LaSgs~----DgtIrVWDl~tg--~~--~~ 554 (1915)
+++|+.. +.|.+|.+ .++.+. ..+. .......|++++++++|+++.. ++.|..|.+... .+ +.
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 4566666 68888887 555543 2222 3445678999999999999876 568999988653 33 33
Q ss_pred EeecCCCCeEEEEeccCccCCCcEEEEEe-CCCeEEEEecccCcccccee--ccCccccccccCCCCCceEEEEECCCCc
Q psy9598 555 VLVGHQGIITGVNFCPLEVNGFNYLASTS-TDGCIGFWKYKLDIDISKTV--FHEPVMFNERIRPGNAHILCSSFSPGGL 631 (1915)
Q Consensus 555 ~l~~h~~~V~sl~fsp~~~~d~~~L~sgs-~DgtI~iWDl~~~~~~~~~~--~~~~~~~~~~~~~~~~~V~~l~fspdg~ 631 (1915)
...........|+++|+ +.+|+++. .+|+|.++++.....+.... ...........+.......++.|+|+|+
T Consensus 81 ~~~~~g~~p~~i~~~~~----g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~ 156 (345)
T PF10282_consen 81 SVPSGGSSPCHIAVDPD----GRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGR 156 (345)
T ss_dssp EEEESSSCEEEEEECTT----SSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSS
T ss_pred eeccCCCCcEEEEEecC----CCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCC
Confidence 33323445678899884 36666665 68999999998743222221 1000000000112235578999999999
Q ss_pred EEEEEeC-CCeEEEEEecCCCC-CceeEEe-ccCCCCeeEEEEcCCCCEEEEE-eCCCcEEEEEcc--CCceEEeeeccc
Q psy9598 632 FLATGSG-DHHVRVYKMDGVDS-PLGILEV-EEHSDKVDSIQWSHSHLRFVSG-SRDGTALIWYYK--CSQWRFIRLDMN 705 (1915)
Q Consensus 632 ~Lasgs~-Dg~I~IwDl~~~~~-~~~i~~l-~~h~~~V~sl~fspdg~~L~sg-s~DG~I~IWDl~--~~~~~~~~~~~~ 705 (1915)
+|++... ...|.+|+++.... ......+ ......-..++|+|++.++++. -.++.|.+|++. .+.+..... .
T Consensus 157 ~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~--~ 234 (345)
T PF10282_consen 157 FVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQT--I 234 (345)
T ss_dssp EEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE--E
T ss_pred EEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEE--e
Confidence 8877543 45899999954331 1111222 2334567889999999977655 467889999988 443322211 1
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC--CCce--EEEeeCCCCCeEEEEEccCCCCEEE
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF--NGDL--VQVLKGHTNEVFVLESHPFDSRVLL 781 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~--tg~~--i~~l~gH~~~V~sl~~sp~dg~~La 781 (1915)
...+. ..........|+++|+|++|+++....+.|.+|++. +|.+ +..+.........++++| ++++|+
T Consensus 235 ~~~~~------~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~-~g~~l~ 307 (345)
T PF10282_consen 235 STLPE------GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSP-DGRYLY 307 (345)
T ss_dssp ESCET------TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-T-TSSEEE
T ss_pred eeccc------cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeC-CCCEEE
Confidence 11111 011123678899999999999998878899999983 3433 334443344578999999 888888
Q ss_pred EEe-cCceEEEEECC--CCcc
Q psy9598 782 SAG-HDGLIIIWDIL--SSKQ 799 (1915)
Q Consensus 782 Sgs-~DG~I~IWdl~--s~~~ 799 (1915)
+++ .++.|.+|++. +|..
T Consensus 308 Va~~~s~~v~vf~~d~~tG~l 328 (345)
T PF10282_consen 308 VANQDSNTVSVFDIDPDTGKL 328 (345)
T ss_dssp EEETTTTEEEEEEEETTTTEE
T ss_pred EEecCCCeEEEEEEeCCCCcE
Confidence 776 56799999874 4444
No 326
>KOG1827|consensus
Probab=99.22 E-value=3.8e-12 Score=157.96 Aligned_cols=228 Identities=16% Similarity=0.159 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHhc---CCCccCCCCCCCCCCCCCccccccCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhhhhc
Q psy9598 1373 ATCEKIITGLEEVM---GLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFN 1449 (1915)
Q Consensus 1373 ~~~~~i~~~~~~~~---~~~~~~~F~~pv~~~~~p~Y~~~I~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na~~yN 1449 (1915)
.....|++.+..++ +..+...|.+++++...|+||.+|..||.|..|++|+..+.|++++.|..||.+|+.||++||
T Consensus 55 ~~f~~il~~~~~~~d~~gk~~~d~feklp~~~~~p~yy~~i~~pisl~~ik~kv~k~~y~~~~~f~~D~~lm~ena~~~n 134 (629)
T KOG1827|consen 55 PKFKTILASLLDLKDDEGKQLFDKFEKLPSRKEFPEYYYVIQQPISLDQIKRKVKKGRYKRLSFFQLDFLLMTENARLYN 134 (629)
T ss_pred HHHHHHHHHHHhhccccCcccchhHhhccccccCCCcceeecCcccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHhc
Confidence 45677777777776 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCCCccchhhhhcccccCCCChhhhhhhhhhhccccCCcchhhhhHHHhhhhhcCC
Q psy9598 1450 EPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSEEEEEEDSKSRQRRVRPTAVTRAQREAMNQKKLKR 1529 (1915)
Q Consensus 1450 ~~~s~i~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1529 (1915)
.++|.|+++|..|...|....... .+ ...+..+.+ .-.++........+-.. ... ...
T Consensus 135 ~~ds~~~~~s~~l~~~~~~~~~~~--~d----------~e~s~~~~~-~l~~~~l~~~~~~~~~i-------~~~--~~~ 192 (629)
T KOG1827|consen 135 RPDSLIYKDSGELEKYFISLEDEK--KD----------GELSMESNE-ELKAGGLHYHELGPVEI-------DGT--KYI 192 (629)
T ss_pred Ccchhhhhhhhhhhcchhhhhccc--cc----------hhhcccccc-ccccCCCCcccCCCccc-------cCc--ccc
Confidence 999999999999999997655420 00 000000000 00000000000000000 000 000
Q ss_pred chhhHHHHHHHHHHHHc----C-CCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHh
Q psy9598 1530 PFNWKNECREVLETLWV----C-PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNS 1604 (1915)
Q Consensus 1530 ~~~~~~~~~~ll~~l~~----~-~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na 1604 (1915)
+.. .-++..--. + -....|...++...+|+||.+++-||.+..+.+++..+.|.....|..|+.++|.|+
T Consensus 193 ~gd-----~vlv~~~~d~~~p~v~~Ier~w~~~dg~k~~~~~w~~rP~~T~H~a~r~F~k~Evfkt~~~~~~~~q~l~g~ 267 (629)
T KOG1827|consen 193 VGD-----YVLVQNPADNLKPIVAQIERLWKLPDGEKWPQGCWIYRPEETVHRADRKFYKQEVFKTSLYRDDLVQRLLGK 267 (629)
T ss_pred cCc-----eeeecCcccccCCceeeecccccCcccccccceeEeeCCccCccccccchhcccceecccccccHHHHhhcc
Confidence 000 011111111 0 115788899999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHHH
Q psy9598 1605 RNYNQNKRSKIYIMTTRLSEFAEE 1628 (1915)
Q Consensus 1605 ~~yN~~~~s~i~~~a~~l~~~f~~ 1628 (1915)
..|+... ..|+.++..|.+.+.-
T Consensus 268 c~v~~~~-~yi~~~p~~ls~~dv~ 290 (629)
T KOG1827|consen 268 CYVMKPT-EYISGDPENLSEEDVF 290 (629)
T ss_pred eEEeehh-HhhhcCccccccccee
Confidence 9999988 8999999888775443
No 327
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.22 E-value=1.5e-09 Score=138.32 Aligned_cols=238 Identities=13% Similarity=0.089 Sum_probs=150.4
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCC---CeEEEEecccCccccceeccCccccccccCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD---GCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D---gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
..|.+||.. |.....+..+...+.+.+|+|+ ++.|+.++.. ..|.+||+.++...... .
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPD----G~~la~~s~~~~~~~I~~~dl~~g~~~~l~-------------~ 237 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPD----GTKLAYVSFESKKPVVYVHDLATGRRRVVA-------------N 237 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCC----CCEEEEEEccCCCcEEEEEECCCCCEEEee-------------c
Confidence 467777774 4555556677888999999994 4777776643 46999999877432111 1
Q ss_pred CCCceEEEEECCCCcEEE-EEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-CCcEEEEEcc-
Q psy9598 617 GNAHILCSSFSPGGLFLA-TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-DGTALIWYYK- 693 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~La-sgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG~I~IWDl~- 693 (1915)
..+.+.+.+|+|+|+.|+ +.+.+|...||.++.... ....+..+...+....|+|+|..|+..+. +|...||.+.
T Consensus 238 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~--~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~ 315 (427)
T PRK02889 238 FKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGS--GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPA 315 (427)
T ss_pred CCCCccceEECCCCCEEEEEEccCCCceEEEEECCCC--CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEEC
Confidence 123456889999998876 467788877777643221 13344555566677899999998876554 5677777654
Q ss_pred -CCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeEEE
Q psy9598 694 -CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVFVL 770 (1915)
Q Consensus 694 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~sl 770 (1915)
++....+. .........+|+|+|++|+.++..++ .|.+||+.++.......+ ......
T Consensus 316 ~~g~~~~lt-----------------~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~--~~~~~p 376 (427)
T PRK02889 316 SGGAAQRVT-----------------FTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDT--TRDESP 376 (427)
T ss_pred CCCceEEEe-----------------cCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCC--CCccCc
Confidence 33321111 01112235789999999988775232 699999988875543322 234678
Q ss_pred EEccCCCCEEEEEecCc---eEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCC
Q psy9598 771 ESHPFDSRVLLSAGHDG---LIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPD 825 (1915)
Q Consensus 771 ~~sp~dg~~LaSgs~DG---~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpd 825 (1915)
.|+| ++++|+.++.++ .+.+.++. +.. ...+. .+.+.+...+|+|-
T Consensus 377 ~~sp-dg~~l~~~~~~~g~~~l~~~~~~-g~~--~~~l~-----~~~g~~~~p~wsp~ 425 (427)
T PRK02889 377 SFAP-NGRYILYATQQGGRSVLAAVSSD-GRI--KQRLS-----VQGGDVREPSWGPF 425 (427)
T ss_pred eECC-CCCEEEEEEecCCCEEEEEEECC-CCc--eEEee-----cCCCCCCCCccCCC
Confidence 9999 888887776544 35555553 332 22221 23456777788873
No 328
>KOG3881|consensus
Probab=99.21 E-value=5.1e-10 Score=129.16 Aligned_cols=275 Identities=11% Similarity=0.075 Sum_probs=193.1
Q ss_pred ecCCCCcEEEEEEcCCC--CEEEEEECCCcEEEEECCCCcEEEE------EeCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Q psy9598 472 NLGHLSAVFCVLFDKLG--EVIVTGADDLLIKLWRARDGKLLAT------LRGCSGEISDIAIDNRNILLAAGTVDKTIR 543 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg--~~LaTGs~Dg~I~IWd~~tg~~~~~------l~gH~~~I~~Lafspdg~~LaSgs~DgtIr 543 (1915)
..+-...|..++|.-++ ..|...+.+..+..+......+... ..+.+++|..++.... .|++|-.+|.+.
T Consensus 51 ~~~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg--~Litc~~sG~l~ 128 (412)
T KOG3881|consen 51 GVDELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADG--TLITCVSSGNLQ 128 (412)
T ss_pred ccchhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCC--EEEEEecCCcEE
Confidence 33456778888886544 4455555676777777766654433 3455677877776433 788888899999
Q ss_pred EEECCCCc----eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCC--CeEEEEecccCccccceeccCccccccccCCC
Q psy9598 544 IWNLQTLA----PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD--GCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 617 (1915)
Q Consensus 544 VWDl~tg~----~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D--gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1915)
+|.+..+. .+..+..+ ..+..+.-++. ....+++|+.. ..+.+||+.....+..........+.-. -
T Consensus 129 ~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~---~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~Lr---V 201 (412)
T KOG3881|consen 129 VRHDKSGDLHSSKLIKLATG-PGLYDVRQTDT---DPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLR---V 201 (412)
T ss_pred EEeccCCccccccceeeecC-CceeeeccCCC---CCceEecCchhcccceeeeecccceeeeeccCCCCccccce---e
Confidence 99987433 23333333 34556666653 34677889988 8899999988754433222111111000 1
Q ss_pred CCceEEEEECCC--CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy9598 618 NAHILCSSFSPG--GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 618 ~~~V~~l~fspd--g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~ 695 (1915)
...++.+.|.+. ...||+++.-|.|++||..... ..+..+.-...+|+++...|.|+++++|..-|.+..||++.+
T Consensus 202 PvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR--RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~ 279 (412)
T KOG3881|consen 202 PVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR--RPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGG 279 (412)
T ss_pred eeeeccceecCCCCCceEEEEecceeEEEecCcccC--cceeEeccccCcceeeeecCCCcEEEEecccchhheecccCc
Confidence 245778899988 8899999999999999996444 445666667889999999999999999999999999999988
Q ss_pred ceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 696 QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
.... ....+..+.|.+|..+|.+.+|++++- |..|+|+|+.+.++++.... ...+++|.+.+
T Consensus 280 kl~g---------------~~~kg~tGsirsih~hp~~~~las~GL-DRyvRIhD~ktrkll~kvYv-Ks~lt~il~~~ 341 (412)
T KOG3881|consen 280 KLLG---------------CGLKGITGSIRSIHCHPTHPVLASCGL-DRYVRIHDIKTRKLLHKVYV-KSRLTFILLRD 341 (412)
T ss_pred eeec---------------cccCCccCCcceEEEcCCCceEEeecc-ceeEEEeecccchhhhhhhh-hccccEEEecC
Confidence 7332 123456788999999999999999998 99999999999776654431 22345555543
No 329
>KOG2041|consensus
Probab=99.20 E-value=3.1e-09 Score=128.76 Aligned_cols=284 Identities=13% Similarity=0.149 Sum_probs=199.5
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc---------------EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK---------------LLATLRGCSGEISDIAIDNRNILLAAGTVDK 540 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~---------------~~~~l~gH~~~I~~Lafspdg~~LaSgs~Dg 540 (1915)
.....|++|+....|||+||.||.++|..+.+.. .-+++.||.+.|.-+.|+.+.+.|-|...+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 3567899999999999999999999999876431 2246789999999999999999999999999
Q ss_pred cEEEEECCCCceEEEee--cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCC
Q psy9598 541 TIRIWNLQTLAPISVLV--GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618 (1915)
Q Consensus 541 tIrVWDl~tg~~~~~l~--~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1915)
.|.||-+-.|.-...+. ...+.|.+++|.. +|..+.....||.|.+=.+........- +. .
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~----dG~kIcIvYeDGavIVGsvdGNRIwgKe-Lk------------g 156 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNL----DGTKICIVYEDGAVIVGSVDGNRIWGKE-LK------------G 156 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEEEEEEEcC----CCcEEEEEEccCCEEEEeeccceecchh-cc------------h
Confidence 99999987665332221 2345788999987 5588888888988877665544321111 00 0
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEecCCCC----CceeE----EeccCCCCeeEEEEc--------CCCCEEEEEe
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS----PLGIL----EVEEHSDKVDSIQWS--------HSHLRFVSGS 682 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~----~~~i~----~l~~h~~~V~sl~fs--------pdg~~L~sgs 682 (1915)
.....+.|++|...++.+-.+|.+++||..+.-. ..+.. .+......|..+.|. |+...|+++.
T Consensus 157 ~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy 236 (1189)
T KOG2041|consen 157 QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCY 236 (1189)
T ss_pred heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEE
Confidence 2234688999999999999999999999753211 11111 112222346666664 4667899999
Q ss_pred CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEec-------C-CeEEEEECCCC
Q psy9598 683 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF-------N-FQIKIWDAFNG 754 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~-------D-g~I~vwD~~tg 754 (1915)
..|.+.|-.-.+.. .+ ........+..+.|+++|..|++++.. | +.|.+|. .-|
T Consensus 237 ~nGr~QiMR~eND~---------------~P--vv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G 298 (1189)
T KOG2041|consen 237 ANGRMQIMRSENDP---------------EP--VVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYG 298 (1189)
T ss_pred cCceehhhhhcCCC---------------CC--eEEecccEeecceecCCCcEEEEccCcccccCccccceEEEec-cch
Confidence 99988875322211 00 111233678889999999999998861 1 2455554 358
Q ss_pred ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 755 DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 755 ~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
..+.+|+.....|++++|-. .|-.++. ..|+.|++=+++-
T Consensus 299 ~i~gtlkvpg~~It~lsWEg-~gLriA~-AvdsfiyfanIRP 338 (1189)
T KOG2041|consen 299 HIVGTLKVPGSCITGLSWEG-TGLRIAI-AVDSFIYFANIRP 338 (1189)
T ss_pred hheEEEecCCceeeeeEEcC-CceEEEE-EecceEEEEeecc
Confidence 88999998899999999986 4444444 4588888877754
No 330
>KOG1409|consensus
Probab=99.20 E-value=6.5e-10 Score=126.05 Aligned_cols=328 Identities=14% Similarity=0.181 Sum_probs=204.2
Q ss_pred ccccccCCCeEEEecccCCceeeeEE-ecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC----CcEEEEEeCCCCC
Q psy9598 446 REYSGPLSRSLMISSHKYSNLRQHYV-NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGE 520 (1915)
Q Consensus 446 r~~tg~~d~~~~i~~~~~~~~~~~~~-l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t----g~~~~~l~gH~~~ 520 (1915)
..++.+.++++++|-..... +.... ...-..+++++.+.+....|++|-..|+|.-+.+.. ...++....|.+.
T Consensus 38 gv~~~s~drtvrv~lkrds~-q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~ 116 (404)
T KOG1409|consen 38 GVISVSEDRTVRVWLKRDSG-QYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQAR 116 (404)
T ss_pred CeEEccccceeeeEEecccc-ccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcc
Confidence 34567788888888532221 11111 122357899999999999999999999999997643 3455666789999
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcccc
Q psy9598 521 ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDIS 600 (1915)
Q Consensus 521 I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~ 600 (1915)
|..+-|+-...++++.+.|..+.--..+.+.-+..+.- ....+++.| +-.+.+.|...|.|.+..+...
T Consensus 117 v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~-~~~~t~~~~------d~~~~fvGd~~gqvt~lr~~~~---- 185 (404)
T KOG1409|consen 117 VSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF-ETPASALQF------DALYAFVGDHSGQITMLKLEQN---- 185 (404)
T ss_pred eeeEEecCCceeEEEeccccceEEEeeccCCcccceEe-eccCCCCce------eeEEEEecccccceEEEEEeec----
Confidence 99999999999999999998776555555544332211 011111111 1123444555555554433322
Q ss_pred ceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEE
Q psy9598 601 KTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680 (1915)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~s 680 (1915)
.......+.+|.+.++|++|.+....|++|..|..|.+||+.+ .......+.+|...|..++..+--..|++
T Consensus 186 ------~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg--~~g~~~el~gh~~kV~~l~~~~~t~~l~S 257 (404)
T KOG1409|consen 186 ------GCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGG--RKGTAYELQGHNDKVQALSYAQHTRQLIS 257 (404)
T ss_pred ------CCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccC--Ccceeeeeccchhhhhhhhhhhhheeeee
Confidence 2233445668889999999999999999999999999999943 23445678999999999998888889999
Q ss_pred EeCCCcEEEEEccCCceEEeeecccccC-CCC-c-----------ccccc-----ccccccEEEEEECCCCCEEEEEEec
Q psy9598 681 GSRDGTALIWYYKCSQWRFIRLDMNTCL-PHT-K-----------ETSDE-----TNKKIKVTMVAWDASDRWVITAINF 742 (1915)
Q Consensus 681 gs~DG~I~IWDl~~~~~~~~~~~~~~~~-~~~-~-----------~~~~~-----~~~~~~V~~va~spdg~~L~t~s~~ 742 (1915)
++.||.|.+|++..............+. ... . ..... ......|...+-+....+...+.
T Consensus 258 ~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~mg~-- 335 (404)
T KOG1409|consen 258 CGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMGF-- 335 (404)
T ss_pred ccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccccccc--
Confidence 9999999999987543211100000000 000 0 00000 00111222222222222222222
Q ss_pred CCeEEEEECC-------CCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 743 NFQIKIWDAF-------NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 743 Dg~I~vwD~~-------tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
.-.+++-|.- +..++.++..-...|+.+.+.- +-.+|+|+|.|..|+|||+..
T Consensus 336 e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqe-tlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 336 EFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQE-TLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred eeEEEEecccchhhhcCCCCccccccccccceeEEEhhh-hccceeecCCceEEEEEechh
Confidence 3345554432 1123444432233588888876 677899999999999999964
No 331
>KOG1827|consensus
Probab=99.20 E-value=2.1e-11 Score=151.52 Aligned_cols=149 Identities=21% Similarity=0.206 Sum_probs=124.0
Q ss_pred HHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHHHhCCCCCCccchhhhhcccccCCCChhhhhhhhhhhccccCCcc
Q psy9598 1434 AQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSEEEEEEDSKSRQRRVRPTA 1513 (1915)
Q Consensus 1434 ~~~D~~l~~~Na~~yN~~~s~i~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1513 (1915)
+..|+.||++||..||.|.+.++++|+-+.+...+....+.. +
T Consensus 2 ~~~df~l~~e~~~~~~~p~s~p~k~~~~~~~~~~~~k~~~~~---------------~---------------------- 44 (629)
T KOG1827|consen 2 VVADFPLMTENACSDNEPDSLPGKDAKNLQKTPLHDKTLMGR---------------D---------------------- 44 (629)
T ss_pred chhhhhHHhhccccccCCccccccCcchhhhchhhhhcccCC---------------C----------------------
Confidence 457999999999999999999999999988877544411000 0
Q ss_pred hhhhhHHHhhhhhcCCchhhHHHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCC
Q psy9598 1514 VTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNY 1587 (1915)
Q Consensus 1514 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y 1587 (1915)
......+....+...+|..+..+.+ ...|.+++++++.|+||.+|.+||.|..|++|+..++|
T Consensus 45 -----------d~p~i~~~~~~~f~~il~~~~~~~d~~gk~~~d~feklp~~~~~p~yy~~i~~pisl~~ik~kv~k~~y 113 (629)
T KOG1827|consen 45 -----------DSPVIDPPLIPKFKTILASLLDLKDDEGKQLFDKFEKLPSRKEFPEYYYVIQQPISLDQIKRKVKKGRY 113 (629)
T ss_pred -----------CccccChHHHHHHHHHHHHHHhhccccCcccchhHhhccccccCCCcceeecCcccHHHHHHHHHhccc
Confidence 0012234455667777777776544 67999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy9598 1588 ESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLR 1631 (1915)
Q Consensus 1588 ~s~~ef~~Dv~lif~Na~~yN~~~~s~i~~~a~~l~~~f~~~~~ 1631 (1915)
.+.+.|..|+.||+.||+.||..+ |.+|++|..|+..|..+..
T Consensus 114 ~~~~~f~~D~~lm~ena~~~n~~d-s~~~~~s~~l~~~~~~~~~ 156 (629)
T KOG1827|consen 114 KRLSFFQLDFLLMTENARLYNRPD-SLIYKDSGELEKYFISLED 156 (629)
T ss_pred ccHHHHHHHHHHHHHHHHHhcCcc-hhhhhhhhhhhcchhhhhc
Confidence 999999999999999999999988 9999999999999987654
No 332
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.16 E-value=6e-09 Score=133.47 Aligned_cols=234 Identities=15% Similarity=0.118 Sum_probs=152.0
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC---CCeEEEEecccCccccceeccCccccccccCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST---DGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~---DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
..|.+||... .....+..|...+.+.+|+|+ ++.|+.++. +..|.+||+.++.... + ..
T Consensus 182 ~~l~~~d~dg-~~~~~lt~~~~~v~~p~wSpD----G~~lay~s~~~g~~~i~~~dl~~g~~~~-l------------~~ 243 (435)
T PRK05137 182 KRLAIMDQDG-ANVRYLTDGSSLVLTPRFSPN----RQEITYMSYANGRPRVYLLDLETGQREL-V------------GN 243 (435)
T ss_pred eEEEEECCCC-CCcEEEecCCCCeEeeEECCC----CCEEEEEEecCCCCEEEEEECCCCcEEE-e------------ec
Confidence 4788999854 445566678889999999994 477777653 4689999998774311 1 11
Q ss_pred CCCceEEEEECCCCcEEE-EEeCCCe--EEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-CC--cEEEE
Q psy9598 617 GNAHILCSSFSPGGLFLA-TGSGDHH--VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-DG--TALIW 690 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~La-sgs~Dg~--I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG--~I~IW 690 (1915)
+.+.+.+.+|+|+|+.|+ +.+.+|. |.+||+.+. ....+..+.......+|+|+|..|+.++. +| .|.+|
T Consensus 244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~----~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~ 319 (435)
T PRK05137 244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSG----TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVM 319 (435)
T ss_pred CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCC----ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEE
Confidence 224567889999998775 4555555 666677432 23345556666778999999998887663 34 57777
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecC--CeEEEEECCCCceEEEeeCCCCCeE
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN--FQIKIWDAFNGDLVQVLKGHTNEVF 768 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~D--g~I~vwD~~tg~~i~~l~gH~~~V~ 768 (1915)
|+.++....+. .....+....|+|+|++|+...... ..|.+||+.++.. ..+. +...+.
T Consensus 320 d~~g~~~~~lt-----------------~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~ 380 (435)
T PRK05137 320 NADGSNPRRIS-----------------FGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVE 380 (435)
T ss_pred ECCCCCeEEee-----------------cCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCC
Confidence 77665433211 0123345678999999998876422 3688899865543 3333 223467
Q ss_pred EEEEccCCCCEEEEEecC------ceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 769 VLESHPFDSRVLLSAGHD------GLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 769 sl~~sp~dg~~LaSgs~D------G~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
.+.|+| ++++|+..+.+ ..|.++++..+.. ..+. ..+.+...+|+|
T Consensus 381 ~p~~sp-DG~~i~~~~~~~~~~~~~~L~~~dl~g~~~---~~l~------~~~~~~~p~Wsp 432 (435)
T PRK05137 381 GPTWAP-NGRVIMFFRQTPGSGGAPKLYTVDLTGRNE---REVP------TPGDASDPAWSP 432 (435)
T ss_pred CCeECC-CCCEEEEEEccCCCCCcceEEEEECCCCce---EEcc------CCCCccCcccCC
Confidence 889999 88877765543 2577888866543 1221 123456677876
No 333
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.15 E-value=1.4e-08 Score=120.91 Aligned_cols=301 Identities=16% Similarity=0.196 Sum_probs=205.1
Q ss_pred CcEEEEEEcCCCCEEEEEECCC---------------cEEEEECCCCcEEEEEeCCCCC--EE-EEEEeCCCCEEEEEeC
Q psy9598 477 SAVFCVLFDKLGEVIVTGADDL---------------LIKLWRARDGKLLATLRGCSGE--IS-DIAIDNRNILLAAGTV 538 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~Dg---------------~I~IWd~~tg~~~~~l~gH~~~--I~-~Lafspdg~~LaSgs~ 538 (1915)
..|.-+.|||.+.||.|=+..+ .+.|||+.+|.++..+.+...+ .. -+.|+-+..++|--.
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv- 150 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVV- 150 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhc-
Confidence 6799999999999999976543 4999999999999999877666 55 678998887776553
Q ss_pred CCcEEEEECCCCce----EEEeecCCCCeEEEEeccCccCCCcEEEE-----EeCCCeEEEEecccCccccceeccCccc
Q psy9598 539 DKTIRIWNLQTLAP----ISVLVGHQGIITGVNFCPLEVNGFNYLAS-----TSTDGCIGFWKYKLDIDISKTVFHEPVM 609 (1915)
Q Consensus 539 DgtIrVWDl~tg~~----~~~l~~h~~~V~sl~fsp~~~~d~~~L~s-----gs~DgtI~iWDl~~~~~~~~~~~~~~~~ 609 (1915)
...+.|+++ ++.. .+.+. ...|....|+|.+ ++..|+. ++..+++++|.+..+..+.+..+-.
T Consensus 151 ~~sl~i~e~-t~n~~~~p~~~lr--~~gi~dFsisP~~--n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk--- 222 (561)
T COG5354 151 GSSLYIHEI-TDNIEEHPFKNLR--PVGILDFSISPEG--NHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFK--- 222 (561)
T ss_pred cCeEEEEec-CCccccCchhhcc--ccceeeEEecCCC--CCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEe---
Confidence 457999997 3322 22222 3567888999964 3344443 4678899999988665444433321
Q ss_pred cccccCCCCCceEEEEECCCCcEEEEEe-----------CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEE
Q psy9598 610 FNERIRPGNAHILCSSFSPGGLFLATGS-----------GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678 (1915)
Q Consensus 610 ~~~~~~~~~~~V~~l~fspdg~~Lasgs-----------~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L 678 (1915)
..-..+.|.+.|.+|++-- ....+.|+++.... +.......++|..++|.|.+..|
T Consensus 223 ---------~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~----i~V~~~~~~pVhdf~W~p~S~~F 289 (561)
T COG5354 223 ---------VSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS----IPVEKDLKDPVHDFTWEPLSSRF 289 (561)
T ss_pred ---------ecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc----cceeccccccceeeeecccCCce
Confidence 1223466777776554321 13467888884222 12222568899999999999877
Q ss_pred EEEe--CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe--cCCeEEEEECCCC
Q psy9598 679 VSGS--RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN--FNFQIKIWDAFNG 754 (1915)
Q Consensus 679 ~sgs--~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~--~Dg~I~vwD~~tg 754 (1915)
++.+ .+..+.++|++..- +... ....-+.+.|+|.++++++++- .-|.|-+||....
T Consensus 290 ~vi~g~~pa~~s~~~lr~Nl-~~~~------------------Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~r 350 (561)
T COG5354 290 AVISGYMPASVSVFDLRGNL-RFYF------------------PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGR 350 (561)
T ss_pred eEEecccccceeecccccce-EEec------------------CCcccccccccCcccEEEEecCCccccceEEeccCCc
Confidence 6554 78889999988762 2211 1223345789999999999764 2467999998654
Q ss_pred c-eEEEeeCCCCCeEEEEEccCCCCEEEEEe------cCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCC
Q psy9598 755 D-LVQVLKGHTNEVFVLESHPFDSRVLLSAG------HDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT 827 (1915)
Q Consensus 755 ~-~i~~l~gH~~~V~sl~~sp~dg~~LaSgs------~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~ 827 (1915)
- ++..+.+.. ..-+.|+| ++.++.+.. .|..|.|||+..... ...+.+.|.|.|+
T Consensus 351 f~~~~~~~~~n--~s~~~wsp-d~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~---------------fel~~~~W~p~~~ 412 (561)
T COG5354 351 FKVAGAFNGLN--TSYCDWSP-DGQFYDTDTTSEKLRVDNSIKLWDVYGAKV---------------FELTNITWDPSGQ 412 (561)
T ss_pred eEEEEEeecCC--ceEeeccC-CceEEEecCCCcccccCcceEEEEecCchh---------------hhhhhccccCCcc
Confidence 3 343665544 35567999 898887764 378899999975443 2456688999888
Q ss_pred EEEEEeCCC
Q psy9598 828 TCALTDSYG 836 (1915)
Q Consensus 828 ~Lasg~~dG 836 (1915)
+..+.+..+
T Consensus 413 ~~ttsSs~~ 421 (561)
T COG5354 413 YVTTSSSCP 421 (561)
T ss_pred cceeeccCC
Confidence 776666543
No 334
>cd05494 Bromodomain_1 Bromodomain; uncharacterized subfamily. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=99.15 E-value=1.7e-11 Score=123.89 Aligned_cols=77 Identities=19% Similarity=0.160 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCC--CCCCCccccCCCcCCHHHHHHHhcCC-------CCCCHHHHHHHHHHHHHH
Q psy9598 118 WKNECREVLETLWVCPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGD-------NYESPIDFVKDVKRVFHN 188 (1915)
Q Consensus 118 ~~~~~~~il~~l~~~~~~~~F~~pvd~--~~~pdY~~iIk~Pmdl~ti~~kl~~~-------~Y~~~~~f~~D~~Lif~N 188 (1915)
....|..+|..+++++.+|||..|||. .++||||+|||+||||+||++||.++ .|..-..+.+++..++.|
T Consensus 4 ~~~~~l~~l~~~~~~~~~~pF~~PVd~~~~~~pdY~~iIK~PMDL~ti~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (114)
T cd05494 4 ALERVLRELKRHRRNEDAWPFLEPVNPPRRGAPDYRDVIKRPMSFGTKVNNIVETGARDLEDLQIVQEDPADKQIDDEGR 83 (114)
T ss_pred HHHHHHHHHHHhhhCCCCCCcCCCCCchhcCCCChhhhcCCCCChHHHHHHHHccccccccccccccccccccccccccc
Confidence 345677778888888899999999997 99999999999999999999999986 455556677888888888
Q ss_pred HhhhcC
Q psy9598 189 SRNYNQ 194 (1915)
Q Consensus 189 ~~~yN~ 194 (1915)
|..+|.
T Consensus 84 ~~~~~~ 89 (114)
T cd05494 84 RSPSNI 89 (114)
T ss_pred cCcccc
Confidence 888886
No 335
>KOG1912|consensus
Probab=99.14 E-value=4.6e-08 Score=120.56 Aligned_cols=338 Identities=12% Similarity=0.033 Sum_probs=210.0
Q ss_pred hhhcccCccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCC------------CCEEEEEECCCcEEEEECC
Q psy9598 439 TVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKL------------GEVIVTGADDLLIKLWRAR 506 (1915)
Q Consensus 439 ~v~~l~~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspd------------g~~LaTGs~Dg~I~IWd~~ 506 (1915)
.+.+--++.+.-+.+..+.+- +...++.+..+.-|...|+.|.|.|- .-+||++...|.|.|||..
T Consensus 20 A~Dw~~~GLiAygshslV~VV--Ds~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~ 97 (1062)
T KOG1912|consen 20 AADWSPSGLIAYGSHSLVSVV--DSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFV 97 (1062)
T ss_pred ccccCccceEEEecCceEEEE--ehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEeh
Confidence 333444444443334444443 33456667788899999999999862 2357778888999999999
Q ss_pred CCcEEEEEeCCCCCEEEEEEeC---CC-CEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEE
Q psy9598 507 DGKLLATLRGCSGEISDIAIDN---RN-ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582 (1915)
Q Consensus 507 tg~~~~~l~gH~~~I~~Lafsp---dg-~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg 582 (1915)
.+..+..+..|..+|.+++|-+ +. .+|++-....+|.+|+..+|..+...........|+.+.|.. .+.+..-
T Consensus 98 ~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd---~rh~~~l 174 (1062)
T KOG1912|consen 98 LASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFD---SRHFCVL 174 (1062)
T ss_pred hhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCC---cceEEEE
Confidence 9999999999999999999966 23 466666777899999999999888877666677788888864 3444444
Q ss_pred eCCCeEEEEecccCccc----cceeccCc-----------------------ccccc-----ccCCC-------------
Q psy9598 583 STDGCIGFWKYKLDIDI----SKTVFHEP-----------------------VMFNE-----RIRPG------------- 617 (1915)
Q Consensus 583 s~DgtI~iWDl~~~~~~----~~~~~~~~-----------------------~~~~~-----~~~~~------------- 617 (1915)
+..|.|.+.+.-..... ..+....+ ..+.. .+.+|
T Consensus 175 ~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prel 254 (1062)
T KOG1912|consen 175 GSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPREL 254 (1062)
T ss_pred ccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccce
Confidence 44555544433111000 00000000 00000 00111
Q ss_pred -----------------CCceEEEEECCCC--cEEEEEeCCCeEEEEEecCCC----------------CCceeE-----
Q psy9598 618 -----------------NAHILCSSFSPGG--LFLATGSGDHHVRVYKMDGVD----------------SPLGIL----- 657 (1915)
Q Consensus 618 -----------------~~~V~~l~fspdg--~~Lasgs~Dg~I~IwDl~~~~----------------~~~~i~----- 657 (1915)
.+.+.-+.+-|++ ..|+++..||.+.||-..... ....+.
T Consensus 255 lv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~ 334 (1062)
T KOG1912|consen 255 LVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEF 334 (1062)
T ss_pred EEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhc
Confidence 1122233444543 468888899998888643100 000000
Q ss_pred -------------------------------------------------------------------EeccCCCCeeEEE
Q psy9598 658 -------------------------------------------------------------------EVEEHSDKVDSIQ 670 (1915)
Q Consensus 658 -------------------------------------------------------------------~l~~h~~~V~sl~ 670 (1915)
...+|...+.++.
T Consensus 335 rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~ 414 (1062)
T KOG1912|consen 335 RPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVR 414 (1062)
T ss_pred ccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeee
Confidence 0012333333332
Q ss_pred EcC-----------CCC-------EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCC
Q psy9598 671 WSH-----------SHL-------RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDAS 732 (1915)
Q Consensus 671 fsp-----------dg~-------~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spd 732 (1915)
..| .|+ +++.|...|+|.++|+.++... .....|...|.++.|...
T Consensus 415 ~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~----------------~~fsvht~~VkgleW~g~ 478 (1062)
T KOG1912|consen 415 MRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVA----------------ASFSVHTSLVKGLEWLGN 478 (1062)
T ss_pred cccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhh----------------hhhcccccceeeeeeccc
Confidence 221 121 5788999999999998877621 234457788888888877
Q ss_pred CCEEEEEEec--------CCeEEEEECCCCceEE--Eee-CCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCc
Q psy9598 733 DRWVITAINF--------NFQIKIWDAFNGDLVQ--VLK-GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798 (1915)
Q Consensus 733 g~~L~t~s~~--------Dg~I~vwD~~tg~~i~--~l~-gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~ 798 (1915)
..++-.+.+. -+.+.|-|+++|--.. .++ ....+|..|..+. .++||+..-.|.-+-|||+.+..
T Consensus 479 sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~-~~~yLai~Fr~~plEiwd~kt~~ 554 (1062)
T KOG1912|consen 479 SSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSS-SGRYLAILFRREPLEIWDLKTLR 554 (1062)
T ss_pred eeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecc-cCceEEEEecccchHHHhhccch
Confidence 7666544431 2347788888885432 223 3456899999998 89999999999999999996644
No 336
>KOG2315|consensus
Probab=99.14 E-value=9.2e-09 Score=123.92 Aligned_cols=311 Identities=16% Similarity=0.183 Sum_probs=196.8
Q ss_pred cCccccccCCCeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEE-----ECC-----CcEEEEECCCCcEEEE
Q psy9598 444 RSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTG-----ADD-----LLIKLWRARDGKLLAT 513 (1915)
Q Consensus 444 ~~r~~tg~~d~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTG-----s~D-----g~I~IWd~~tg~~~~~ 513 (1915)
.|+...-+....+.|....... ..++.+. ..++++.|||-|.+|.|= ..+ -.+++|++.++.....
T Consensus 45 ~G~lfA~~~~~~v~i~~~~~~~-~~lt~~~---~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~ 120 (566)
T KOG2315|consen 45 NGRLFAYSDNQVVKVFEIATLK-VVLCVEL---KKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQ 120 (566)
T ss_pred CCcEEEEEcCCeEEEEEccCCc-EEEEecc---ceeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhh
Confidence 3555554445555554433332 2222322 278999999999999862 122 3577999999766655
Q ss_pred EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEE-----EeCCCeE
Q psy9598 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAS-----TSTDGCI 588 (1915)
Q Consensus 514 l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~s-----gs~DgtI 588 (1915)
+......-.++.|+.|..+.|- -..+.|.+|++.+.+.+. -.-|...|+.+.++|.. ....+++ +|.-+.|
T Consensus 121 ~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp--~~~~vAvyvPe~kGaPa~v 196 (566)
T KOG2315|consen 121 IQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGP--EPPFVAVYVPEKKGAPASV 196 (566)
T ss_pred eehhhhcCcccccccchhhhhh-hhcceEEEEecCCcccee-eeeeccceeeEEecCCC--CCceEEEEccCCCCCCcEE
Confidence 5432222268999998764432 235679999998744322 22367788999999852 2233333 4556789
Q ss_pred EEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE-EEEE--eC---------CCeEEEEEecCCCCCcee
Q psy9598 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF-LATG--SG---------DHHVRVYKMDGVDSPLGI 656 (1915)
Q Consensus 589 ~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~-Lasg--s~---------Dg~I~IwDl~~~~~~~~i 656 (1915)
+||.+..... +.+......+. ..-..+.|++-|.- |+.+ .. ..+++++++.+ ..+.
T Consensus 197 ri~~~~~~~~------~~~~a~ksFFk---adkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g---~s~~ 264 (566)
T KOG2315|consen 197 RIYKYPEEGQ------HQPVANKSFFK---ADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG---ESVS 264 (566)
T ss_pred EEeccccccc------cchhhhccccc---cceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC---ceEE
Confidence 9998762211 11111111111 22345677776653 2222 22 23677777741 1122
Q ss_pred EEeccCCCCeeEEEEcCCCCEEEE--EeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC
Q psy9598 657 LEVEEHSDKVDSIQWSHSHLRFVS--GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR 734 (1915)
Q Consensus 657 ~~l~~h~~~V~sl~fspdg~~L~s--gs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~ 734 (1915)
.. -...++|.++.|+++|+-|++ |-.-..+.|||++..-.. ....++-+++-|+|.|+
T Consensus 265 V~-L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~-------------------df~egpRN~~~fnp~g~ 324 (566)
T KOG2315|consen 265 VP-LLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVF-------------------DFPEGPRNTAFFNPHGN 324 (566)
T ss_pred Ee-cCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeE-------------------eCCCCCccceEECCCCC
Confidence 22 234789999999999987655 456678999988754311 11334567799999999
Q ss_pred EEEEEEe--cCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEec------CceEEEEECCCC
Q psy9598 735 WVITAIN--FNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH------DGLIIIWDILSS 797 (1915)
Q Consensus 735 ~L~t~s~--~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~------DG~I~IWdl~s~ 797 (1915)
+|+.+|- .-|.|-|||+.+.+++..+.... .+-+.|+| ||.+|+|+.. |..++||+....
T Consensus 325 ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~P-dGe~flTATTaPRlrvdNg~KiwhytG~ 392 (566)
T KOG2315|consen 325 IILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSP-DGEYFLTATTAPRLRVDNGIKIWHYTGS 392 (566)
T ss_pred EEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcC-CCcEEEEEeccccEEecCCeEEEEecCc
Confidence 9998874 35789999999999999887655 45678999 9999999875 688999998643
No 337
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.13 E-value=3.2e-09 Score=119.75 Aligned_cols=152 Identities=18% Similarity=0.339 Sum_probs=109.9
Q ss_pred EEEEECCCCcEEEEEeC----------CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE--eCCCcEEE
Q psy9598 622 LCSSFSPGGLFLATGSG----------DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG--SRDGTALI 689 (1915)
Q Consensus 622 ~~l~fspdg~~Lasgs~----------Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg--s~DG~I~I 689 (1915)
..+.|++.|.+|++-.. -|...||.++....+.....+. ..++|.+++|+|+|..|++. ..++.|.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~-~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELK-KEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeecc-CCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 46788888877665333 2446677774444444443333 34569999999999987654 46789999
Q ss_pred EEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe--cCCeEEEEECCCCceEEEeeCCCCCe
Q psy9598 690 WYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN--FNFQIKIWDAFNGDLVQVLKGHTNEV 767 (1915)
Q Consensus 690 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~--~Dg~I~vwD~~tg~~i~~l~gH~~~V 767 (1915)
||++... +.. -....++.|.|+|+|++|++++. ..|.|.+||+.+.+.+..+. |. .+
T Consensus 88 yd~~~~~-i~~------------------~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~ 146 (194)
T PF08662_consen 88 YDVKGKK-IFS------------------FGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DA 146 (194)
T ss_pred EcCcccE-eEe------------------ecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cE
Confidence 9996222 110 12345678999999999999874 24679999999988887765 33 47
Q ss_pred EEEEEccCCCCEEEEEec------CceEEEEECCC
Q psy9598 768 FVLESHPFDSRVLLSAGH------DGLIIIWDILS 796 (1915)
Q Consensus 768 ~sl~~sp~dg~~LaSgs~------DG~I~IWdl~s 796 (1915)
+.++|+| +|++|+|++. |..++||++..
T Consensus 147 t~~~WsP-dGr~~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 147 TDVEWSP-DGRYLATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred EEEEEcC-CCCEEEEEEeccceeccccEEEEEecC
Confidence 8999999 9999999874 78899999853
No 338
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.13 E-value=1.9e-09 Score=121.58 Aligned_cols=114 Identities=23% Similarity=0.400 Sum_probs=90.0
Q ss_pred ccccEEEEEECCCCCEEEEEE-ecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEec---CceEEEEECC
Q psy9598 720 KKIKVTMVAWDASDRWVITAI-NFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH---DGLIIIWDIL 795 (1915)
Q Consensus 720 ~~~~V~~va~spdg~~L~t~s-~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~---DG~I~IWdl~ 795 (1915)
..+.|..++|+|+|..+++.. ..++.|.+||+. ++.+..+. ...++.|.|+| +|++|++||. .|.|.+||+.
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP-~G~~l~~~g~~n~~G~l~~wd~~ 133 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSP-DGRFLVLAGFGNLNGDLEFWDVR 133 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECC-CCCEEEEEEccCCCcEEEEEECC
Confidence 345699999999999876553 336799999996 67777664 45688999999 9999999875 4679999999
Q ss_pred CCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeC------CCeEEEEeCCCC
Q psy9598 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS------YGHLLVYGLGGF 846 (1915)
Q Consensus 796 s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~------dG~I~Iwdl~s~ 846 (1915)
+.+. +..+. +..+..++|||||++|++++. |..+.||++.+.
T Consensus 134 ~~~~--i~~~~-------~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 134 KKKK--ISTFE-------HSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred CCEE--eeccc-------cCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence 7666 44332 345789999999999999874 678999998644
No 339
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.12 E-value=3.7e-08 Score=124.00 Aligned_cols=300 Identities=10% Similarity=0.015 Sum_probs=183.6
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEE
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVN 567 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~ 567 (1915)
+..|++++.+|.|..+|..+|+.+..+..........+. ++..++.++.++.|..||..+|+.+...... +.+.
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~--- 138 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVL--- 138 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceee---
Confidence 678899999999999999999998877644332222332 4667888889999999999999988765432 2222
Q ss_pred eccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEe
Q psy9598 568 FCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647 (1915)
Q Consensus 568 fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl 647 (1915)
-+|.. .+..++.++.+|.|..||..++..+.......+... ....... .+. + ..++++..+|.|..+|+
T Consensus 139 ~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~---~~~~~sp----~~~-~-~~v~~~~~~g~v~ald~ 207 (377)
T TIGR03300 139 SPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALT---LRGSASP----VIA-D-GGVLVGFAGGKLVALDL 207 (377)
T ss_pred cCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCcee---ecCCCCC----EEE-C-CEEEEECCCCEEEEEEc
Confidence 12211 235677788899999999999876555443311100 0000011 111 2 36777888888988887
Q ss_pred cCCCCCceeEEecc-----CCC--C---e-eEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccc
Q psy9598 648 DGVDSPLGILEVEE-----HSD--K---V-DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSD 716 (1915)
Q Consensus 648 ~~~~~~~~i~~l~~-----h~~--~---V-~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1915)
.+.. .+..... ... . + .+..+ .+..+++++.+|.+..||..+++...... .
T Consensus 208 ~tG~---~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~-~------------ 269 (377)
T TIGR03300 208 QTGQ---PLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRD-A------------ 269 (377)
T ss_pred cCCC---EeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeec-c------------
Confidence 4332 1211110 000 0 0 11111 24578888899999999999887443211 0
Q ss_pred cccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCC-CeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 717 ETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN-EVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 717 ~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~-~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
. .....+ ..+..|++++. +|.|..+|..+|+.+........ .+.+... .+..|++++.+|.|++||..
T Consensus 270 -~----~~~~p~--~~~~~vyv~~~-~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i---~g~~l~~~~~~G~l~~~d~~ 338 (377)
T TIGR03300 270 -S----SYQGPA--VDDNRLYVTDA-DGVVVALDRRSGSELWKNDELKYRQLTAPAV---VGGYLVVGDFEGYLHWLSRE 338 (377)
T ss_pred -C----CccCce--EeCCEEEEECC-CCeEEEEECCCCcEEEccccccCCccccCEE---ECCEEEEEeCCCEEEEEECC
Confidence 0 011111 24667777776 99999999999988766532211 1222222 35688899999999999999
Q ss_pred CCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy9598 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 841 (1915)
Q Consensus 796 s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iw 841 (1915)
+++. +..+. .+...+...-.. -+..|++++.||.|+.|
T Consensus 339 tG~~--~~~~~-----~~~~~~~~sp~~-~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 339 DGSF--VARLK-----TDGSGIASPPVV-VGDGLLVQTRDGDLYAF 376 (377)
T ss_pred CCCE--EEEEE-----cCCCccccCCEE-ECCEEEEEeCCceEEEe
Confidence 9987 55444 111112111111 23458889999999876
No 340
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.11 E-value=9.7e-08 Score=118.38 Aligned_cols=281 Identities=14% Similarity=0.184 Sum_probs=176.2
Q ss_pred EEEEeCC----CcEEEEEC--CCCceEEEe-ecCCCCeEEEEeccCccCCCcEEEEEeC----CCeEEEEecccCccccc
Q psy9598 533 LAAGTVD----KTIRIWNL--QTLAPISVL-VGHQGIITGVNFCPLEVNGFNYLASTST----DGCIGFWKYKLDIDISK 601 (1915)
Q Consensus 533 LaSgs~D----gtIrVWDl--~tg~~~~~l-~~h~~~V~sl~fsp~~~~d~~~L~sgs~----DgtI~iWDl~~~~~~~~ 601 (1915)
++.|+.. +.|.+|.+ .++.....- .........|+++|. +++|+++.. +|.|..|.+........
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~----~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~ 77 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPD----GRRLYVVNEGSGDSGGVSSYRIDPDTGTLT 77 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TT----SSEEEEEETTSSTTTEEEEEEEETTTTEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeC----CCEEEEEEccccCCCCEEEEEECCCcceeE
Confidence 4555554 68888888 444432211 123455677889884 478888766 57999998876521111
Q ss_pred eeccCccccccccCCCCCceEEEEECCCCcEEEEEe-CCCeEEEEEecCCCCCceeEEec-----------cCCCCeeEE
Q psy9598 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS-GDHHVRVYKMDGVDSPLGILEVE-----------EHSDKVDSI 669 (1915)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~IwDl~~~~~~~~i~~l~-----------~h~~~V~sl 669 (1915)
.... ..........++++|++.+|+++. .+|.|.+|++............. .......++
T Consensus 78 ~~~~--------~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v 149 (345)
T PF10282_consen 78 LLNS--------VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQV 149 (345)
T ss_dssp EEEE--------EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEE
T ss_pred Eeee--------eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeE
Confidence 1111 111224556799999999988876 48999999996433222221111 123457899
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEEccCCc--eEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeE
Q psy9598 670 QWSHSHLRFVSGS-RDGTALIWYYKCSQ--WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQI 746 (1915)
Q Consensus 670 ~fspdg~~L~sgs-~DG~I~IWDl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I 746 (1915)
.|+|+|++|++.. ....|.+|++.... +.... .........-..++|+|+++++++....++.|
T Consensus 150 ~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~-------------~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v 216 (345)
T PF10282_consen 150 VFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVD-------------SIKVPPGSGPRHLAFSPDGKYAYVVNELSNTV 216 (345)
T ss_dssp EE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEE-------------EEECSTTSSEEEEEE-TTSSEEEEEETTTTEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEeCCCceEEEee-------------ccccccCCCCcEEEEcCCcCEEEEecCCCCcE
Confidence 9999999887764 34578999887654 21100 00112445678899999999999999889999
Q ss_pred EEEECC--CCce--EEEeeC----C--CCCeEEEEEccCCCCEEEEEe-cCceEEEEECCC--CccccceeeeeeecCCC
Q psy9598 747 KIWDAF--NGDL--VQVLKG----H--TNEVFVLESHPFDSRVLLSAG-HDGLIIIWDILS--SKQRGYKWFHNIVEGQG 813 (1915)
Q Consensus 747 ~vwD~~--tg~~--i~~l~g----H--~~~V~sl~~sp~dg~~LaSgs-~DG~I~IWdl~s--~~~~~~~~~~~~~~~~~ 813 (1915)
.+|++. ++.+ +..+.. . ......|+++| ++++|+++. ..++|.+|++.. +.. ..+..+ .. .
T Consensus 217 ~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~isp-dg~~lyvsnr~~~sI~vf~~d~~~g~l---~~~~~~-~~-~ 290 (345)
T PF10282_consen 217 SVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISP-DGRFLYVSNRGSNSISVFDLDPATGTL---TLVQTV-PT-G 290 (345)
T ss_dssp EEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-T-TSSEEEEEECTTTEEEEEEECTTTTTE---EEEEEE-EE-S
T ss_pred EEEeecccCCceeEEEEeeeccccccccCCceeEEEec-CCCEEEEEeccCCEEEEEEEecCCCce---EEEEEE-eC-C
Confidence 999988 4432 233221 1 12578899999 888776654 577999999943 333 222211 11 2
Q ss_pred CcceEEEEEcCCCCEEEEEe-CCCeEEEEeCC
Q psy9598 814 EGALFDGKWSPDGTTCALTD-SYGHLLVYGLG 844 (1915)
Q Consensus 814 ~~~V~~vafSpdg~~Lasg~-~dG~I~Iwdl~ 844 (1915)
......++++|+|++|++++ .++.|.+|+++
T Consensus 291 G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d 322 (345)
T PF10282_consen 291 GKFPRHFAFSPDGRYLYVANQDSNTVSVFDID 322 (345)
T ss_dssp SSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCeEEEEEEe
Confidence 23478999999999999887 56789999875
No 341
>KOG2314|consensus
Probab=99.11 E-value=1.2e-08 Score=121.84 Aligned_cols=308 Identities=15% Similarity=0.135 Sum_probs=195.4
Q ss_pred EEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC-----------CCcEEEEEC
Q psy9598 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV-----------DKTIRIWNL 547 (1915)
Q Consensus 479 V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~-----------DgtIrVWDl 547 (1915)
=+-+.|||.|.||+|--.-| |.+|--.+...++.|. |. .|.-+.|||..+||+|-|. ...|+|||+
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI 289 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI 289 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEc
Confidence 35688999999999998775 8899988877777775 54 4889999999999999753 257999999
Q ss_pred CCCceEEEeec--CCCCeE-EEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEE
Q psy9598 548 QTLAPISVLVG--HQGIIT-GVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS 624 (1915)
Q Consensus 548 ~tg~~~~~l~~--h~~~V~-sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l 624 (1915)
.+|.....+.. ....++ -+.||. +..++|.-.. .+|.||+......+....+ .-..|...
T Consensus 290 ~tG~lkrsF~~~~~~~~~WP~frWS~----DdKy~Arm~~-~sisIyEtpsf~lld~Ksl------------ki~gIr~F 352 (698)
T KOG2314|consen 290 ATGLLKRSFPVIKSPYLKWPIFRWSH----DDKYFARMTG-NSISIYETPSFMLLDKKSL------------KISGIRDF 352 (698)
T ss_pred cccchhcceeccCCCccccceEEecc----CCceeEEecc-ceEEEEecCceeeeccccc------------CCccccCc
Confidence 99998887765 222333 356776 4478887776 4588887654322111111 12557888
Q ss_pred EECCCCcEEEEEeC-----CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-------CC---cEEE
Q psy9598 625 SFSPGGLFLATGSG-----DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-------DG---TALI 689 (1915)
Q Consensus 625 ~fspdg~~Lasgs~-----Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-------DG---~I~I 689 (1915)
+|+|.+++||-=.. -..+.|..+ .....+.+..-|.-.=..|.|..+|.+|+.--. .| .+-|
T Consensus 353 swsP~~~llAYwtpe~~~~parvtL~ev---Ps~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eI 429 (698)
T KOG2314|consen 353 SWSPTSNLLAYWTPETNNIPARVTLMEV---PSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEI 429 (698)
T ss_pred ccCCCcceEEEEcccccCCcceEEEEec---CccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEE
Confidence 99999887764322 123344444 222222222223222234557777887765321 11 1233
Q ss_pred EEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe--cCCeEEEEECCC----CceEEEeeCC
Q psy9598 690 WYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN--FNFQIKIWDAFN----GDLVQVLKGH 763 (1915)
Q Consensus 690 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~--~Dg~I~vwD~~t----g~~i~~l~gH 763 (1915)
+.++... ...........|...+|.|.|..+++-+. ...++.+|.+.+ ..++..|..
T Consensus 430 frireKd----------------Ipve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk- 492 (698)
T KOG2314|consen 430 FRIREKD----------------IPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK- 492 (698)
T ss_pred EEeeccC----------------CCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-
Confidence 3333221 11122234567889999999987765543 234688887763 234444432
Q ss_pred CCCeEEEEEccCCCCEEEEEe---cCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCC
Q psy9598 764 TNEVFVLESHPFDSRVLLSAG---HDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 835 (1915)
Q Consensus 764 ~~~V~sl~~sp~dg~~LaSgs---~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~d 835 (1915)
...+.|.|+| .|++++.++ ..|.+.++|..-..+ .. +....+...+.+.|.|.|++++++++.
T Consensus 493 -~~~N~vfwsP-kG~fvvva~l~s~~g~l~F~D~~~a~~--k~-----~~~~eh~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 493 -KFANTVFWSP-KGRFVVVAALVSRRGDLEFYDTDYADL--KD-----TASPEHFAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred -cccceEEEcC-CCcEEEEEEecccccceEEEecchhhh--hh-----ccCccccccccceECCCCCEEEEeeeh
Confidence 3467899999 888887764 578999999875333 11 112234567789999999999998874
No 342
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.10 E-value=3.5e-07 Score=107.46 Aligned_cols=371 Identities=14% Similarity=0.141 Sum_probs=212.2
Q ss_pred EecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEE-----E--ECCCcEEEEECCCCcEEEE-EeCCCCCEEEE-EEeC
Q psy9598 458 ISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVT-----G--ADDLLIKLWRARDGKLLAT-LRGCSGEISDI-AIDN 528 (1915)
Q Consensus 458 i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaT-----G--s~Dg~I~IWd~~tg~~~~~-l~gH~~~I~~L-afsp 528 (1915)
+|.......+. .++..|.+-|+--.|+|+|+.+|. | ...+.|.+.+...|+..+. +-| ...+.+ -|.|
T Consensus 61 lWe~slk~g~~-~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyfG--r~fT~VaG~~~ 137 (668)
T COG4946 61 LWEYSLKDGKP-LRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYFG--RRFTRVAGWIP 137 (668)
T ss_pred HHHhhhccCCe-eEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEec--cccceeeccCC
Confidence 35444444443 467889999999999999999886 2 2345688888888876543 223 334444 5899
Q ss_pred CCCEEEEEeCCCcE----EEEECCC----------CceEEEeecCCCCeEEEEe----ccCcc----CCCcEEEEEeCCC
Q psy9598 529 RNILLAAGTVDKTI----RIWNLQT----------LAPISVLVGHQGIITGVNF----CPLEV----NGFNYLASTSTDG 586 (1915)
Q Consensus 529 dg~~LaSgs~DgtI----rVWDl~t----------g~~~~~l~~h~~~V~sl~f----sp~~~----~d~~~L~sgs~Dg 586 (1915)
+|..|++...-.-. .+|.+.. |-..+.+... + +.-|.= .|... +....|.+++..|
T Consensus 138 dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~d-g-~ivigRntydLP~WK~YkGGtrGklWis~d~g 215 (668)
T COG4946 138 DGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKD-G-IIVIGRNTYDLPHWKGYKGGTRGKLWISSDGG 215 (668)
T ss_pred CCCEEEEeccCCCcccceeeeEEccCCceeeeccCCceeeEEEeC-C-EEEEccCcccCcccccccCCccceEEEEecCC
Confidence 99988876432211 1222211 1111111110 0 111100 01000 0112333333333
Q ss_pred --eEEEEecccCccccceeccCccccccccCCCCCceEE-------------------EEECCCCcEEEEEeCCCeEEEE
Q psy9598 587 --CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC-------------------SSFSPGGLFLATGSGDHHVRVY 645 (1915)
Q Consensus 587 --tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~-------------------l~fspdg~~Lasgs~Dg~I~Iw 645 (1915)
--++.|+.+......+..+ ..-+... ..+-+.+++ -..+.||+.|+.. ..|.|.+|
T Consensus 216 ~tFeK~vdl~~~vS~PmIV~~-RvYFlsD-~eG~GnlYSvdldGkDlrrHTnFtdYY~R~~nsDGkrIvFq-~~GdIyly 292 (668)
T COG4946 216 KTFEKFVDLDGNVSSPMIVGE-RVYFLSD-HEGVGNLYSVDLDGKDLRRHTNFTDYYPRNANSDGKRIVFQ-NAGDIYLY 292 (668)
T ss_pred cceeeeeecCCCcCCceEEcc-eEEEEec-ccCccceEEeccCCchhhhcCCchhccccccCCCCcEEEEe-cCCcEEEe
Confidence 2345555544221111111 0001000 011122333 3345577766653 45789999
Q ss_pred EecCCCCCceeE-EeccC--------CCCeeEEE-Ec-CCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccc
Q psy9598 646 KMDGVDSPLGIL-EVEEH--------SDKVDSIQ-WS-HSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKET 714 (1915)
Q Consensus 646 Dl~~~~~~~~i~-~l~~h--------~~~V~sl~-fs-pdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~ 714 (1915)
|..+.. ...+- .+.-. ..++.-+. |+ .+|.+++..|. |.+.|.+...+-.+
T Consensus 293 dP~td~-lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~i---------------- 354 (668)
T COG4946 293 DPETDS-LEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSI---------------- 354 (668)
T ss_pred CCCcCc-ceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeE----------------
Confidence 874322 11111 00000 00111111 22 25667776665 55555543322211
Q ss_pred cccccccccEEEEEECCCCCEEEEEEecCC-eEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEE
Q psy9598 715 SDETNKKIKVTMVAWDASDRWVITAINFNF-QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793 (1915)
Q Consensus 715 ~~~~~~~~~V~~va~spdg~~L~t~s~~Dg-~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWd 793 (1915)
..++...|.-..+..++.-++.|.. || .|-|+|..+++. ..+...-+.|.++..++ +|.+++.+.+...|.+.|
T Consensus 355 --qv~~~~~VrY~r~~~~~e~~vigt~-dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~-dGK~~vvaNdr~el~vid 429 (668)
T COG4946 355 --QVGKKGGVRYRRIQVDPEGDVIGTN-DGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSP-DGKKVVVANDRFELWVID 429 (668)
T ss_pred --EcCCCCceEEEEEccCCcceEEecc-CCceEEEEecCCceE-EEeeCCccceEEEEEcC-CCcEEEEEcCceEEEEEE
Confidence 2235566777788888888888888 77 899999987654 45556677899999999 999999999999999999
Q ss_pred CCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCcccccC-CC----ceeecCCCCe
Q psy9598 794 ILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYG----HLLVYGLGGFKRPQNI-PR----ELFFHTDYRT 864 (1915)
Q Consensus 794 l~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG----~I~Iwdl~s~~~~~~l-~~----~~~F~~d~~~ 864 (1915)
+.++... .+.....+-|+..+|||++++||.+--+| +|+|||+.+++.+... +. ..+|.+|++.
T Consensus 430 idngnv~-------~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ry 502 (668)
T COG4946 430 IDNGNVR-------LIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRY 502 (668)
T ss_pred ecCCCee-------EecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcE
Confidence 9999872 23334568899999999999999987665 5899999998766433 32 5578888887
Q ss_pred ee
Q psy9598 865 LN 866 (1915)
Q Consensus 865 Lv 866 (1915)
|.
T Consensus 503 LY 504 (668)
T COG4946 503 LY 504 (668)
T ss_pred EE
Confidence 75
No 343
>KOG4547|consensus
Probab=99.10 E-value=4.4e-09 Score=127.87 Aligned_cols=277 Identities=19% Similarity=0.115 Sum_probs=173.3
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCc
Q psy9598 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEP 607 (1915)
Q Consensus 528 pdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~ 607 (1915)
|...++|....||.++||++.+++....+. | .+..+..++...|.+..+.........
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~------------p--------~~~~s~t~~~~~w~L~~~~s~~k~~~~-- 60 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFA------------P--------IASLSGTCTYTKWGLSADYSPMKWLSL-- 60 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeec------------c--------chhccCcceeEEEEEEeccchHHHHhH--
Confidence 445688888999999999998877655443 2 112222334444543222110000000
Q ss_pred cccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcE
Q psy9598 608 VMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTA 687 (1915)
Q Consensus 608 ~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I 687 (1915)
.. ...-+.+...|+-|...|.|.+|++.+.. ......-.+|.+.|.++.++.+-..|.|++.|+.+
T Consensus 61 -----------~~--~~~~s~~t~~lvlgt~~g~v~~ys~~~g~-it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v 126 (541)
T KOG4547|consen 61 -----------EK--AKKASLDTSMLVLGTPQGSVLLYSVAGGE-ITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKV 126 (541)
T ss_pred -----------HH--HhhccCCceEEEeecCCccEEEEEecCCe-EEEEEecCCCCCcceeeecccccCceEecCCceeE
Confidence 00 00112244578889999999999984332 22223346799999999999999999999999999
Q ss_pred EEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCe
Q psy9598 688 LIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 767 (1915)
Q Consensus 688 ~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V 767 (1915)
..|++......... ......+.+++.+|||..+++++ +.|++||+.+++.+..|.||.++|
T Consensus 127 ~~~~~~~~~~~~~~----------------~~~~~~~~sl~is~D~~~l~~as---~~ik~~~~~~kevv~~ftgh~s~v 187 (541)
T KOG4547|consen 127 VYILEKEKVIIRIW----------------KEQKPLVSSLCISPDGKILLTAS---RQIKVLDIETKEVVITFTGHGSPV 187 (541)
T ss_pred EEEecccceeeeee----------------ccCCCccceEEEcCCCCEEEecc---ceEEEEEccCceEEEEecCCCcce
Confidence 99999887744422 22345678899999999999885 599999999999999999999999
Q ss_pred EEEEEccC----CCCEE-EEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEE-cCCCC---EEEEEeCCCeE
Q psy9598 768 FVLESHPF----DSRVL-LSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW-SPDGT---TCALTDSYGHL 838 (1915)
Q Consensus 768 ~sl~~sp~----dg~~L-aSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vaf-Spdg~---~Lasg~~dG~I 838 (1915)
.++.|.-. .|.++ .+...+.-|.+|-+..... .......+. ...-+|+.=.+ ..|+. .+|+....|.+
T Consensus 188 ~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~k--kks~~~sl~-~~dipv~~ds~~~ed~~~~l~lAst~~~g~v 264 (541)
T KOG4547|consen 188 RTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDK--KKSLSCSLT-VPDIPVTSDSGLLEDGTIPLVLASTLIPGIV 264 (541)
T ss_pred EEEEEEEeccccccceeeeccccccceeEEEEEcccc--cchhheeec-cCCCCeEeccccccccccceEEeeeccCcee
Confidence 99999872 14444 4455677788887765222 111110011 11122222222 22333 45666676766
Q ss_pred EEEeCC----CCcccccCCCceeecCCC
Q psy9598 839 LVYGLG----GFKRPQNIPRELFFHTDY 862 (1915)
Q Consensus 839 ~Iwdl~----s~~~~~~l~~~~~F~~d~ 862 (1915)
.++... ..+.+..++...++..++
T Consensus 265 ~~~~~nl~~l~~~~~~kv~~~~~~~s~g 292 (541)
T KOG4547|consen 265 HLKLSNLIILLHKKIVKVNGYNADSSKG 292 (541)
T ss_pred eeccccHHHHhcCccccccceeeecccc
Confidence 666544 333444444555666655
No 344
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.10 E-value=1.4e-08 Score=129.73 Aligned_cols=233 Identities=16% Similarity=0.073 Sum_probs=149.4
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCceEEEeecCCCCeEEEEeccCccC
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD---KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D---gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
..|.++|... .....+..+...+.+.+|+|||++|+.++.. ..|++||+.++.... +..+.+.+.+++|+|++
T Consensus 170 ~~l~~~d~~g-~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg-- 245 (417)
T TIGR02800 170 YELQVADYDG-ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDG-- 245 (417)
T ss_pred ceEEEEcCCC-CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC--
Confidence 3688888754 3345555677789999999999999887654 479999999886543 33455667789999943
Q ss_pred CCcEE-EEEeCCC--eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CC--eEEEEEec
Q psy9598 575 GFNYL-ASTSTDG--CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DH--HVRVYKMD 648 (1915)
Q Consensus 575 d~~~L-~sgs~Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg--~I~IwDl~ 648 (1915)
..| ++.+.++ .|.+|++.++.... + ..+........|+|+|..|+.++. .+ .|.+|++.
T Consensus 246 --~~l~~~~~~~~~~~i~~~d~~~~~~~~-l------------~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~ 310 (417)
T TIGR02800 246 --SKLAVSLSKDGNPDIYVMDLDGKQLTR-L------------TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD 310 (417)
T ss_pred --CEEEEEECCCCCccEEEEECCCCCEEE-C------------CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECC
Confidence 544 4555554 58888887653211 1 111123345689999998876654 33 46666764
Q ss_pred CCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEEccCCceEEeeecccccCCCCccccccccccccEE
Q psy9598 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG---TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVT 725 (1915)
Q Consensus 649 ~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG---~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 725 (1915)
+.. ...+..+...+..+.|+|+|.+|+.++.++ .|.+||+.++....+.. .....
T Consensus 311 ~~~----~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~------------------~~~~~ 368 (417)
T TIGR02800 311 GGE----VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTD------------------TGLDE 368 (417)
T ss_pred CCC----EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccC------------------CCCCC
Confidence 321 233444556677889999999999888776 78888887755322110 01122
Q ss_pred EEEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeEEEEE
Q psy9598 726 MVAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVFVLES 772 (1915)
Q Consensus 726 ~va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~sl~~ 772 (1915)
..+|+|+|.+|+.++..++ .+++.+. ++.....+..+.+.+..++|
T Consensus 369 ~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 369 SPSFAPNGRMILYATTRGGRGVLGLVST-DGRFRARLPLGNGDVREPAW 416 (417)
T ss_pred CceECCCCCEEEEEEeCCCcEEEEEEEC-CCceeeECCCCCCCcCCCCC
Confidence 3579999999988877333 3555553 45555555544444544444
No 345
>KOG1828|consensus
Probab=99.08 E-value=4.9e-11 Score=137.20 Aligned_cols=206 Identities=14% Similarity=0.095 Sum_probs=135.0
Q ss_pred ChHHHHhhcccccCCHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcCCC---CCCCcchhh---------
Q psy9598 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN---PVDVPVVYH--------- 68 (1915)
Q Consensus 1 L~tI~~kl~~~~Y~~~~ef~~D~~li~~Na~~yN~p~s~I~~~A~~l~~~~~~~~~~~~---~~~~~~~~~--------- 68 (1915)
+.||+.|++.++|.++.+|..|+++|..||..||.++-.++..|++|..+...+..+.. ..+....|.
T Consensus 62 ~~t~r~kidd~~yl~L~~m~~d~kl~~~na~~yn~~~Tv~~~aaKrL~~v~~~~~qe~~l~f~~~slg~y~~~rn~~~~v 141 (418)
T KOG1828|consen 62 RITKRSKIDDTRYLVLSQMEFDRKLPDGNATLYNLHPTVPIVAAKRLCPVRLGMTQERLLSFVNTSLGFYEDKRNKVTPV 141 (418)
T ss_pred cccccccCCCccceechhhhhhhcccccchhhhhcCCccccccccccchhhcchhhHHHHHhhhcccchhhhcccccCce
Confidence 46899999999999999999999999999999999999999999999877533222211 000000000
Q ss_pred -----------hhccccCCCCCcccccc---cccccccccCCCCcchhhhhhhhccccC-----CchhHHHHHHHHHHHH
Q psy9598 69 -----------ELLQNYETSSSEEEEEE---DSKSRQRRVRPTAVTRAQREAMNQKKLK-----RPFNWKNECREVLETL 129 (1915)
Q Consensus 69 -----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~il~~l 129 (1915)
.-.+...+..-+++.-. ....++....-+ .........+.-..+ ......+.......+|
T Consensus 142 ~~la~~~~sr~~~~d~~a~~s~ee~~l~v~~~e~~~~~~~~fs-~k~~e~~~e~~~~lgds~g~lqtg~~~l~~~q~~kl 220 (418)
T KOG1828|consen 142 LYLAYGPYSRYHYDDTFANISKEESDLIVSTYEEDSDLPSDFS-HKFLETCQERVVTLGDSVGDLQTGGQQLQTLQEDKL 220 (418)
T ss_pred eeeccCCccchhhhhhcCCCccccccccccccccccccccccc-ccccccCccceEehhhhhhhhccccHHHHHHHHHHh
Confidence 00000111111111100 001111111111 000000000000000 0111223344456677
Q ss_pred hcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH
Q psy9598 130 WVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209 (1915)
Q Consensus 130 ~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~~~s~i~~~a~~l~~ 209 (1915)
........|..||....+|.|.-+|++|||++|++.|..++.|.| -+|..|+.||+.||++||.+. ..+|.+|+.+..
T Consensus 221 ~~~~p~~~lnyg~tas~aP~YSm~Ik~~~~~~Tygdk~~andy~S-~~f~~D~kl~~l~amT~gehs-k~yyelank~lh 298 (418)
T KOG1828|consen 221 NRVDPVAYLNYGPTASFAPGYSMTITEVEPPGTYGDKSSANDYES-LSFTQDRKLIALKAVTNGEHS-KSYYELANKQLH 298 (418)
T ss_pred cccCchhhhcccchhhhcccccccccccCCCcchhhhhhhhhhhh-hhhhcccchhhHHHHhcCCcc-hHHHHHHHhhhh
Confidence 788889999999999999999999999999999999999999999 899999999999999999966 888888888776
No 346
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.08 E-value=3.9e-07 Score=105.90 Aligned_cols=281 Identities=15% Similarity=0.158 Sum_probs=183.7
Q ss_pred CCcEEEEECCCC--cE-EEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCcc
Q psy9598 497 DLLIKLWRARDG--KL-LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEV 573 (1915)
Q Consensus 497 Dg~I~IWd~~tg--~~-~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~ 573 (1915)
+.-|.+|++.+. ++ ...+-.+.+.++-|+|++++++|.++-.++. .+.|.+..|.+.
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~------------------~ggvaay~iD~~-- 74 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGE------------------EGGVAAYRIDPD-- 74 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCC------------------cCcEEEEEEcCC--
Confidence 457999998732 22 1223356778899999999999998876643 344555555542
Q ss_pred CCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CCeEEEEEecCCCC
Q psy9598 574 NGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DHHVRVYKMDGVDS 652 (1915)
Q Consensus 574 ~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~I~IwDl~~~~~ 652 (1915)
||.+.+.+-... .+ ...+.++++++|++|+++.. -|.|.++-+.....
T Consensus 75 -----------~G~Lt~ln~~~~-------------------~g-~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~ 123 (346)
T COG2706 75 -----------DGRLTFLNRQTL-------------------PG-SPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGS 123 (346)
T ss_pred -----------CCeEEEeecccc-------------------CC-CCCeEEEECCCCCEEEEEEccCceEEEEEcccCCc
Confidence 344444332111 01 22266888889988887755 47888888865444
Q ss_pred CceeEEeccCCCC----------eeEEEEcCCCCEEEEEeC-CCcEEEEEccCCceEEeeecccccCCCCcccccccccc
Q psy9598 653 PLGILEVEEHSDK----------VDSIQWSHSHLRFVSGSR-DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721 (1915)
Q Consensus 653 ~~~i~~l~~h~~~----------V~sl~fspdg~~L~sgs~-DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1915)
.........|.+. +.+..|.|++++|++... -..|.+|++..+.+.... .......
T Consensus 124 l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~-------------~~~v~~G 190 (346)
T COG2706 124 LQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPAD-------------PAEVKPG 190 (346)
T ss_pred cccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccccc-------------ccccCCC
Confidence 4444444455555 888999999999888763 346889998866532211 1111345
Q ss_pred ccEEEEEECCCCCEEEEEEecCCeEEEEECCCC-ceEEEeeCC---------CCCeEEEEEccCCCCEEEEEec-CceEE
Q psy9598 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNG-DLVQVLKGH---------TNEVFVLESHPFDSRVLLSAGH-DGLII 790 (1915)
Q Consensus 722 ~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg-~~i~~l~gH---------~~~V~sl~~sp~dg~~LaSgs~-DG~I~ 790 (1915)
..-..|.|+|++++.++.+..+++|-+|..... ..+..++.+ .....+|.+++ +|++|.++.. ...|.
T Consensus 191 ~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~-dGrFLYasNRg~dsI~ 269 (346)
T COG2706 191 AGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISP-DGRFLYASNRGHDSIA 269 (346)
T ss_pred CCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECC-CCCEEEEecCCCCeEE
Confidence 567789999999999999988999999998763 223333221 23567888999 9999887742 33788
Q ss_pred EEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCC-CeEEEEeCCC
Q psy9598 791 IWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY-GHLLVYGLGG 845 (1915)
Q Consensus 791 IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~d-G~I~Iwdl~s 845 (1915)
+|.+..... ...+..... .+.....+..|+++|++|+++..+ .+|.||..+.
T Consensus 270 ~f~V~~~~g--~L~~~~~~~-teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~ 322 (346)
T COG2706 270 VFSVDPDGG--KLELVGITP-TEGQFPRDFNINPSGRFLIAANQKSDNITVFERDK 322 (346)
T ss_pred EEEEcCCCC--EEEEEEEec-cCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcC
Confidence 888865433 222222222 122336788999999999988755 4688998764
No 347
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.05 E-value=4.6e-07 Score=109.79 Aligned_cols=277 Identities=11% Similarity=0.079 Sum_probs=170.5
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC----------CCcEEEEECCCCceEEEeecCC-------
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV----------DKTIRIWNLQTLAPISVLVGHQ------- 560 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~----------DgtIrVWDl~tg~~~~~l~~h~------- 560 (1915)
++|.|.|..+++.+.++.....+-. + ++|||+.|+.+.. +..|.|||+.+++.+..+..-.
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 7999999999999998875443332 4 9999998887765 7899999999999998886422
Q ss_pred CCeEEEEeccCccCCCcEEEEEe-C-CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC
Q psy9598 561 GIITGVNFCPLEVNGFNYLASTS-T-DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638 (1915)
Q Consensus 561 ~~V~sl~fsp~~~~d~~~L~sgs-~-DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~ 638 (1915)
.....++++| ++++|+... . ++.|.+.|+.+++.+..+.... ...-...+.++.+ +-+.
T Consensus 105 ~~~~~~~ls~----dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-------------~~~vy~t~e~~~~--~~~~ 165 (352)
T TIGR02658 105 TYPWMTSLTP----DNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-------------CYHIFPTANDTFF--MHCR 165 (352)
T ss_pred CccceEEECC----CCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-------------CcEEEEecCCccE--EEee
Confidence 2334788888 447777655 4 7899999999987655554321 0111111111111 1223
Q ss_pred CCeEEEEEecCCCCCceeEE---eccCCCCeeEE-EEcC-CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcc
Q psy9598 639 DHHVRVYKMDGVDSPLGILE---VEEHSDKVDSI-QWSH-SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE 713 (1915)
Q Consensus 639 Dg~I~IwDl~~~~~~~~i~~---l~~h~~~V~sl-~fsp-dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~ 713 (1915)
||......+..... ..... +.+-..++..= .|++ +|.++++... |+|.+.|+.......... .. .... .
T Consensus 166 Dg~~~~v~~d~~g~-~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~-~~-~~~~--~ 239 (352)
T TIGR02658 166 DGSLAKVGYGTKGN-PKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPA-IE-AFTE--A 239 (352)
T ss_pred cCceEEEEecCCCc-eEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecce-ee-eccc--c
Confidence 34333333321111 00111 11100000000 3445 7877777666 999999976544221100 00 0000 0
Q ss_pred ccccccccccEEEEEECCCCCEEEEEEe---------cCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCC-EEEEE
Q psy9598 714 TSDETNKKIKVTMVAWDASDRWVITAIN---------FNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR-VLLSA 783 (1915)
Q Consensus 714 ~~~~~~~~~~V~~va~spdg~~L~t~s~---------~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~-~LaSg 783 (1915)
.....-....+.-++++++++.++++.. ..+.|.++|..+++.+..+.. ...+..|+++| |++ +|++.
T Consensus 240 ~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~-Dgkp~lyvt 317 (352)
T TIGR02658 240 EKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQ-DAKPLLYAL 317 (352)
T ss_pred ccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECC-CCCeEEEEe
Confidence 0000112334445999999999998531 125899999999999998873 23689999999 777 77655
Q ss_pred e-cCceEEEEECCCCccccceee
Q psy9598 784 G-HDGLIIIWDILSSKQRGYKWF 805 (1915)
Q Consensus 784 s-~DG~I~IWdl~s~~~~~~~~~ 805 (1915)
. .++.|.|.|+.+++. +..+
T Consensus 318 n~~s~~VsViD~~t~k~--i~~i 338 (352)
T TIGR02658 318 STGDKTLYIFDAETGKE--LSSV 338 (352)
T ss_pred CCCCCcEEEEECcCCeE--Eeee
Confidence 5 688999999999887 5554
No 348
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.05 E-value=5.2e-07 Score=123.11 Aligned_cols=369 Identities=15% Similarity=0.154 Sum_probs=219.5
Q ss_pred CCeEEEe----cccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC---------------C------
Q psy9598 453 SRSLMIS----SHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR---------------D------ 507 (1915)
Q Consensus 453 d~~~~i~----~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~---------------t------ 507 (1915)
+|.+.+. +.....+..+-.+ .++|.|++||||+.+||..+.+|+|.+-+.. .
T Consensus 96 ~Gdi~~~~~~~~~~~~~~E~VG~v---d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsV 172 (928)
T PF04762_consen 96 SGDIILVREDPDPDEDEIEIVGSV---DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSV 172 (928)
T ss_pred CceEEEEEccCCCCCceeEEEEEE---cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeee
Confidence 4444444 3333444443333 4789999999999999999999998886521 0
Q ss_pred --CcEEEEEeC------------------------CCCCEEEEEEeCCCCEEEEEeC---C---CcEEEEECCCCceEEE
Q psy9598 508 --GKLLATLRG------------------------CSGEISDIAIDNRNILLAAGTV---D---KTIRIWNLQTLAPISV 555 (1915)
Q Consensus 508 --g~~~~~l~g------------------------H~~~I~~Lafspdg~~LaSgs~---D---gtIrVWDl~tg~~~~~ 555 (1915)
|+.-..|.| +...-..|+|-.||.++|+.+. . ..||||+-+ |....+
T Consensus 173 GWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~st 251 (928)
T PF04762_consen 173 GWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQST 251 (928)
T ss_pred ccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEec
Confidence 111111111 2224467899999999998875 2 579999965 665554
Q ss_pred eecCCCCeEEEEeccCccCCCcEEEEEeC---CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 556 LVGHQGIITGVNFCPLEVNGFNYLASTST---DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 556 l~~h~~~V~sl~fsp~~~~d~~~L~sgs~---DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
-..-.+--.+++|.|.+ ++|++... ...|.||.-++-. ... |...+.+....|..+.|++++..
T Consensus 252 SE~v~gLe~~l~WrPsG----~lIA~~q~~~~~~~VvFfErNGLr---hge------F~l~~~~~~~~v~~l~Wn~ds~i 318 (928)
T PF04762_consen 252 SEPVDGLEGALSWRPSG----NLIASSQRLPDRHDVVFFERNGLR---HGE------FTLRFDPEEEKVIELAWNSDSEI 318 (928)
T ss_pred cccCCCccCCccCCCCC----CEEEEEEEcCCCcEEEEEecCCcE---eee------EecCCCCCCceeeEEEECCCCCE
Confidence 44444455688999954 78887764 3467777533221 111 12222344577899999999999
Q ss_pred EEEEeCCCeEEEEEecCCCCCceeEEec-cCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEcc----CCc--------eE
Q psy9598 633 LATGSGDHHVRVYKMDGVDSPLGILEVE-EHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYK----CSQ--------WR 698 (1915)
Q Consensus 633 Lasgs~Dg~I~IwDl~~~~~~~~i~~l~-~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~----~~~--------~~ 698 (1915)
||+...|. |.+|-.. ......-..+. .....+..+.|+|.. ..|...+.+|.+..+++. .+. ..
T Consensus 319 LAv~~~~~-vqLWt~~-NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~v 396 (928)
T PF04762_consen 319 LAVWLEDR-VQLWTRS-NYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTV 396 (928)
T ss_pred EEEEecCC-ceEEEee-CCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEE
Confidence 99987665 9999983 23322223332 223345569999864 457777776777655442 111 00
Q ss_pred Ee-------eecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCce--------EEEee--
Q psy9598 699 FI-------RLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL--------VQVLK-- 761 (1915)
Q Consensus 699 ~~-------~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~--------i~~l~-- 761 (1915)
.. ...+.......+...........|..++|++++..+++-.. ||.|.+|....... ...+.
T Consensus 397 aVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~-d~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (928)
T PF04762_consen 397 AVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTS-DGSLSIYEWDLKNMWSVKPPKLLSSISLD 475 (928)
T ss_pred EEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEEC-CCCEEEEEecCCCcccccCcchhhhcccc
Confidence 00 00111111111122223345678999999999987777777 99999988543211 11111
Q ss_pred --------CCCCCeEEEEEccCCCCEEEEEecC---ceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEE
Q psy9598 762 --------GHTNEVFVLESHPFDSRVLLSAGHD---GLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830 (1915)
Q Consensus 762 --------gH~~~V~sl~~sp~dg~~LaSgs~D---G~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~La 830 (1915)
.-...+..++|.. +..+++....+ +.|.++++..... ...+... ....+.+..+...++...++
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 550 (928)
T PF04762_consen 476 SMDISDSELPLGSLRQLAWLN-DDTLLVLSDSDSNQSKIVLVDIDDSEN--SASVESS--TEVDGVVLIISSSPDSGSLY 550 (928)
T ss_pred cccccccccccccEEEEEEeC-CCEEEEEEecCcccceEEEEEeccCCC--ceeEEEE--eccCceEEEEeeCCCCcEEE
Confidence 1233567788876 55555554443 6788888854432 1111111 12345666666677666677
Q ss_pred EEeCCCeEEEEeCCCC
Q psy9598 831 LTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 831 sg~~dG~I~Iwdl~s~ 846 (1915)
.-..+|.|...+....
T Consensus 551 ~q~~~G~v~~~~~~~~ 566 (928)
T PF04762_consen 551 IQTNDGKVFQLSSDGE 566 (928)
T ss_pred EEECCCEEEEeecCCC
Confidence 7788999987766654
No 349
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.04 E-value=2.7e-08 Score=127.31 Aligned_cols=234 Identities=14% Similarity=0.037 Sum_probs=145.5
Q ss_pred cEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCC
Q psy9598 499 LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD---KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575 (1915)
Q Consensus 499 ~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D---gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d 575 (1915)
.|.++|...... ..+..+...+.+..|+|||+.|+..+.+ ..|.+||+.++.... +....+.....+|+|++
T Consensus 199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG--- 273 (448)
T PRK04792 199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDG--- 273 (448)
T ss_pred EEEEEeCCCCCc-eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCC---
Confidence 677778654433 4555667789999999999988876543 258899998877533 22223344578999954
Q ss_pred CcEE-EEEeCCCe--EEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CCe--EEEEEecC
Q psy9598 576 FNYL-ASTSTDGC--IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DHH--VRVYKMDG 649 (1915)
Q Consensus 576 ~~~L-~sgs~Dgt--I~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~--I~IwDl~~ 649 (1915)
..| ++.+.+|. |.+||+.++... . +..+.......+|+|+|++|+..+. +|. |.++|+.+
T Consensus 274 -~~La~~~~~~g~~~Iy~~dl~tg~~~-~------------lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~ 339 (448)
T PRK04792 274 -KKLALVLSKDGQPEIYVVDIATKALT-R------------ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS 339 (448)
T ss_pred -CEEEEEEeCCCCeEEEEEECCCCCeE-E------------CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 555 45666775 666677665321 1 1112234567899999998876554 444 55555532
Q ss_pred CCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-CCc--EEEEEccCCceEEeeecccccCCCCccccccccccccEEE
Q psy9598 650 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-DGT--ALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTM 726 (1915)
Q Consensus 650 ~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG~--I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 726 (1915)
.. ...+ +..+ ......+|+|+|.+|+..+. ++. |.++|+.++....+.. . .....
T Consensus 340 g~-~~~L-t~~g--~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~-----------------~-~~d~~ 397 (448)
T PRK04792 340 GK-VSRL-TFEG--EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTS-----------------T-RLDES 397 (448)
T ss_pred CC-EEEE-ecCC--CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccC-----------------C-CCCCC
Confidence 21 1111 2222 23345789999998877654 443 4456666665322110 0 00112
Q ss_pred EEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 727 VAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 727 va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
..|+|+|+.|+.+...++ .|++++. +|.....+..+.+.+...+|+|
T Consensus 398 ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 398 PSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred ceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCC
Confidence 479999999988776444 3777786 6777777777777788888987
No 350
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.02 E-value=6.8e-08 Score=123.84 Aligned_cols=234 Identities=14% Similarity=0.091 Sum_probs=145.1
Q ss_pred cEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCC---CeEEEEecccCccccceeccCccccccccCCC
Q psy9598 541 TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD---GCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 617 (1915)
Q Consensus 541 tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D---gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1915)
.|.++|...+. ...+..+...+.+..|+|+ ++.|+..+.+ ..|.+|++.++...... ..
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpD----G~~la~~s~~~~~~~l~~~~l~~g~~~~l~-------------~~ 241 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPD----GKRIAYVSFEQKRPRIFVQNLDTGRREQIT-------------NF 241 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCC----CCEEEEEEcCCCCCEEEEEECCCCCEEEcc-------------CC
Confidence 47888887554 4555567778999999994 4777666543 36888998876431111 11
Q ss_pred CCceEEEEECCCCcEEEE-EeCCC--eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-CC--cEEEEE
Q psy9598 618 NAHILCSSFSPGGLFLAT-GSGDH--HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-DG--TALIWY 691 (1915)
Q Consensus 618 ~~~V~~l~fspdg~~Las-gs~Dg--~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG--~I~IWD 691 (1915)
.+.+.+.+|+|+|+.|+. ...+| .|.+||+.+.. ...+..+........|+|+|..|+..+. +| .|.+|+
T Consensus 242 ~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~----~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d 317 (430)
T PRK00178 242 EGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ----LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVN 317 (430)
T ss_pred CCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC----eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 133456899999998874 44454 57778884322 2334455556677889999998776553 34 466667
Q ss_pred ccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeEE
Q psy9598 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVFV 769 (1915)
Q Consensus 692 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~s 769 (1915)
+.++....+.. ........+|+|+|.+|+.....++ .|.+||+.++........ .....
T Consensus 318 ~~~g~~~~lt~-----------------~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~--~~~~~ 378 (430)
T PRK00178 318 VNGGRAERVTF-----------------VGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDT--SLDES 378 (430)
T ss_pred CCCCCEEEeec-----------------CCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCC--CCCCC
Confidence 76666433211 0111234689999999988775333 588999988765332222 22235
Q ss_pred EEEccCCCCEEEEEecC---ceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 770 LESHPFDSRVLLSAGHD---GLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 770 l~~sp~dg~~LaSgs~D---G~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
..|+| ++++|+.++.+ +.|.++++..... ..+. .+.+.+...+|+|
T Consensus 379 p~~sp-dg~~i~~~~~~~g~~~l~~~~~~g~~~---~~l~-----~~~g~~~~p~ws~ 427 (430)
T PRK00178 379 PSVAP-NGTMLIYATRQQGRGVLMLVSINGRVR---LPLP-----TAQGEVREPSWSP 427 (430)
T ss_pred ceECC-CCCEEEEEEecCCceEEEEEECCCCce---EECc-----CCCCCcCCCccCC
Confidence 68999 88877766543 3567777753322 1221 2335566777876
No 351
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.01 E-value=3.2e-07 Score=125.20 Aligned_cols=337 Identities=16% Similarity=0.125 Sum_probs=201.8
Q ss_pred CCCcEEEEEEcCCCCEEEEEECCCcEEEE----ECCCC--cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Q psy9598 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLW----RARDG--KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 475 H~~~V~~vafspdg~~LaTGs~Dg~I~IW----d~~tg--~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~ 548 (1915)
..+.|.++.|-++..-|+.+..+|.|.+. +..+. +.+.. -...|.|++||||+.+|+..+.+++|.+.+ .
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~---vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~ 149 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGS---VDSGILAASWSPDEELLALVTGEGNLLLMT-R 149 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEE---EcCcEEEEEECCCcCEEEEEeCCCEEEEEe-c
Confidence 45789999999999999999999999999 54443 23333 357899999999999999999999988875 4
Q ss_pred CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccc--eeccCccccccccCCCCCceEEEEE
Q psy9598 549 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK--TVFHEPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 549 tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~--~~~~~~~~~~~~~~~~~~~V~~l~f 626 (1915)
+..++....-+.... +....++.|+...=.-|.-..++.... .....+..-...+. ....-..++|
T Consensus 150 ~fd~i~E~~l~~~~~-----------~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISW 217 (928)
T PF04762_consen 150 DFDPISEVPLDSDDF-----------GESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISW 217 (928)
T ss_pred cceEEEEeecCcccc-----------CCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEE
Confidence 455555444332111 113344544433222221111111000 00000000011111 3345678999
Q ss_pred CCCCcEEEEEeC---C---CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC---CCcEEEEEccCCce
Q psy9598 627 SPGGLFLATGSG---D---HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR---DGTALIWYYKCSQW 697 (1915)
Q Consensus 627 spdg~~Lasgs~---D---g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~---DG~I~IWDl~~~~~ 697 (1915)
-.||.++|+.+. . ..|+||+-.+ ........-.+--.+++|.|.|++|++.-. ...|.+|.-+..+
T Consensus 218 RGDG~yFAVss~~~~~~~~R~iRVy~ReG----~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLr- 292 (928)
T PF04762_consen 218 RGDGEYFAVSSVEPETGSRRVIRVYSREG----ELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLR- 292 (928)
T ss_pred CCCCcEEEEEEEEcCCCceeEEEEECCCc----eEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcE-
Confidence 999999998875 2 4789998632 222222233344567899999999888764 2345555322211
Q ss_pred EEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCc--eEEEeeC-CCCCeEEEEEcc
Q psy9598 698 RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD--LVQVLKG-HTNEVFVLESHP 774 (1915)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~--~i~~l~g-H~~~V~sl~~sp 774 (1915)
+-. ...........|..+.|++++..|++... | .|.+|-..+.. +-+.+.. ....+..+.|+|
T Consensus 293 -hge-----------F~l~~~~~~~~v~~l~Wn~ds~iLAv~~~-~-~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdp 358 (928)
T PF04762_consen 293 -HGE-----------FTLRFDPEEEKVIELAWNSDSEILAVWLE-D-RVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDP 358 (928)
T ss_pred -eee-----------EecCCCCCCceeeEEEECCCCCEEEEEec-C-CceEEEeeCCEEEEEEEEEccCCCCCCceEECC
Confidence 100 01111234567899999999999999775 4 49999987754 2333332 233455599999
Q ss_pred CCCCEEEEEecCceEEEEEC----CCCccc----------------cceeeeee--------ecCCCCcceEEEEEcCCC
Q psy9598 775 FDSRVLLSAGHDGLIIIWDI----LSSKQR----------------GYKWFHNI--------VEGQGEGALFDGKWSPDG 826 (1915)
Q Consensus 775 ~dg~~LaSgs~DG~I~IWdl----~s~~~~----------------~~~~~~~~--------~~~~~~~~V~~vafSpdg 826 (1915)
.+...|..+..+|.+.++++ ..+... .+..|... ..-.-..+|.+++|++++
T Consensus 359 e~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~ 438 (928)
T PF04762_consen 359 EKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSN 438 (928)
T ss_pred CCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCC
Confidence 77777888877777755443 222110 00000000 001123578888888888
Q ss_pred CEEEEEeCCCeEEEEeCCCC
Q psy9598 827 TTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 827 ~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
..+|+-..||.|.+|.+...
T Consensus 439 ~~~avl~~d~~l~~~~~~~~ 458 (928)
T PF04762_consen 439 SRFAVLTSDGSLSIYEWDLK 458 (928)
T ss_pred CeEEEEECCCCEEEEEecCC
Confidence 88888888888888876543
No 352
>KOG4190|consensus
Probab=99.00 E-value=1.4e-09 Score=128.09 Aligned_cols=295 Identities=15% Similarity=0.179 Sum_probs=190.1
Q ss_pred EEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC-------CCceEEEeecCCCCeEEEEeccCccCCCcEEEEE
Q psy9598 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-------TLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582 (1915)
Q Consensus 510 ~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~-------tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg 582 (1915)
.+..+.||+..|..|+--.+.+-+++++.|.+|++|.+. +..|..++..|..+|.++.|..+ .+++ +
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~----lr~i--~ 800 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD----LRSI--A 800 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec----ccee--e
Confidence 345678999999999877777789999999999999985 34577889999999999999873 2444 4
Q ss_pred eCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEE-eCCCeEEEEEecCCCCCceeE--Ee
Q psy9598 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG-SGDHHVRVYKMDGVDSPLGIL--EV 659 (1915)
Q Consensus 583 s~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasg-s~Dg~I~IwDl~~~~~~~~i~--~l 659 (1915)
+.||.|.+||.--+..+...... ...+..+.|.|+-- -+...+++| +...+|+++|.+...-...+. ..
T Consensus 801 ScD~giHlWDPFigr~Laq~~da-------pk~~a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna 872 (1034)
T KOG4190|consen 801 SCDGGIHLWDPFIGRLLAQMEDA-------PKEGAGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNA 872 (1034)
T ss_pred eccCcceeecccccchhHhhhcC-------cccCCCceeEeccc-CcchheeeeccchhhheeeecccccceeeEEeccC
Confidence 55789999997666544332221 01112234444432 233444444 678899999986543222222 22
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEE
Q psy9598 660 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA 739 (1915)
Q Consensus 660 ~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~ 739 (1915)
.+.+..+.+++..+.|+.++++-..|+|.+.|.+++..+..-..+ ......++ .|.++.|+.+
T Consensus 873 ~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpm----------------ecdllqla-apsdq~L~~s 935 (1034)
T KOG4190|consen 873 PGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPM----------------ECDLLQLA-APSDQALAQS 935 (1034)
T ss_pred CCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcc----------------cchhhhhc-CchhHHHHhh
Confidence 455677999999999999999999999999999998743211111 11111111 2556666666
Q ss_pred EecCCeEEE-EECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceE
Q psy9598 740 INFNFQIKI-WDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALF 818 (1915)
Q Consensus 740 s~~Dg~I~v-wD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~ 818 (1915)
.. |.++.| |....|......+....+..-+. .-|.-|+++.....+.||--.. ......++..+....-.|..+
T Consensus 936 al-dHslaVnWhaldgimh~q~kpppepahflq---svgpSLV~a~~Gn~lgVYad~a-~~ha~stitKiR~d~f~G~lT 1010 (1034)
T KOG4190|consen 936 AL-DHSLAVNWHALDGIMHLQDKPPPEPAHFLQ---SVGPSLVTAQNGNILGVYADSA-ELHAESTITKIRPDEFPGTLT 1010 (1034)
T ss_pred cc-cceeEeeehhcCCeeeeccCCCCcchhhhh---ccCceeEEeccCcEEEEEecch-hhhhhhhhccccccccCCccc
Confidence 66 888888 88777766655554433332221 1344577777777777774321 110011222222233446778
Q ss_pred EEEEcCCCCEEEEEeCCCeEEE
Q psy9598 819 DGKWSPDGTTCALTDSYGHLLV 840 (1915)
Q Consensus 819 ~vafSpdg~~Lasg~~dG~I~I 840 (1915)
+++.-|-..-+..|...|.|.+
T Consensus 1011 ala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 1011 ALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred eeeeccccchhhccCCCCceee
Confidence 8888887777888888888865
No 353
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.00 E-value=7.7e-08 Score=123.38 Aligned_cols=234 Identities=14% Similarity=0.010 Sum_probs=148.5
Q ss_pred cEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCC
Q psy9598 499 LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD---KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575 (1915)
Q Consensus 499 ~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D---gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d 575 (1915)
.|.++|...+. ...+..+...+.+.+|+|||+.|+..+.+ ..|.+|++.++.... +....+.+.+..|+|++
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG--- 254 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDG--- 254 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCC---
Confidence 47788876554 44555677789999999999999876643 369999999886543 33334455678999943
Q ss_pred CcEEE-EEeCCC--eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CC--eEEEEEecC
Q psy9598 576 FNYLA-STSTDG--CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DH--HVRVYKMDG 649 (1915)
Q Consensus 576 ~~~L~-sgs~Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg--~I~IwDl~~ 649 (1915)
..|+ +.+.+| .|.+||+.++.... + ..+........|+|+|..|+..+. +| .|+++++.+
T Consensus 255 -~~la~~~~~~g~~~Iy~~d~~~~~~~~-l------------t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~ 320 (430)
T PRK00178 255 -SKLAFVLSKDGNPEIYVMDLASRQLSR-V------------TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG 320 (430)
T ss_pred -CEEEEEEccCCCceEEEEECCCCCeEE-c------------ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 5555 555555 57778887764211 1 112233456789999998776654 34 466666633
Q ss_pred CCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC-C--cEEEEEccCCceEEeeecccccCCCCccccccccccccEEE
Q psy9598 650 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD-G--TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTM 726 (1915)
Q Consensus 650 ~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D-G--~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 726 (1915)
.. ...+ ...+ .......|+|+|..|+..+.+ | .|.+||+.++....+.. ......
T Consensus 321 g~-~~~l-t~~~--~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~------------------~~~~~~ 378 (430)
T PRK00178 321 GR-AERV-TFVG--NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTD------------------TSLDES 378 (430)
T ss_pred CC-EEEe-ecCC--CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccC------------------CCCCCC
Confidence 22 1112 1222 233457899999998877643 3 47788888776432110 001113
Q ss_pred EEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 727 VAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 727 va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
..|+|+|+.|+.++..+| .|.++++. |.....+..+.+.+...+|+|
T Consensus 379 p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 379 PSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred ceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCccCC
Confidence 579999999998876333 46777774 555555666666777788887
No 354
>KOG0309|consensus
Probab=99.00 E-value=2.4e-09 Score=130.53 Aligned_cols=288 Identities=18% Similarity=0.205 Sum_probs=189.2
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECC-CCcEEEEEeCCC--CCEEEEEEeCCC---CEEEEEeCCCcEEEEECCC
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCS--GEISDIAIDNRN---ILLAAGTVDKTIRIWNLQT 549 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~-tg~~~~~l~gH~--~~I~~Lafspdg---~~LaSgs~DgtIrVWDl~t 549 (1915)
.+++.++.++|.|+-+|+++.-|.. |-|+. .+....-|. |. -.|-.+.|++.. ..+++. ....-.||++..
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~gl~-i~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVst-s~qkaiiwnlA~ 100 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQGLY-IIDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIVST-SNQKAIIWNLAK 100 (1081)
T ss_pred cCcccceeeccccchhhhhhhcCeE-EEeccCCCCCceeee-ccCcchhcceecccCCCCceeEEec-Ccchhhhhhhhc
Confidence 4678889999999999999988754 44554 344433333 32 247778888753 244444 455667899853
Q ss_pred ---CceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEE
Q psy9598 550 ---LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 550 ---g~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f 626 (1915)
...-..+.||+..|+.+.|+|.. ...|++++.|..|..||+++.... . ..+..-......+.|
T Consensus 101 ss~~aIef~lhghsraitd~n~~~q~---pdVlatcsvdt~vh~wd~rSp~~p--------~---ys~~~w~s~asqVkw 166 (1081)
T KOG0309|consen 101 SSSNAIEFVLHGHSRAITDINFNPQH---PDVLATCSVDTYVHAWDMRSPHRP--------F---YSTSSWRSAASQVKW 166 (1081)
T ss_pred CCccceEEEEecCccceeccccCCCC---CcceeeccccccceeeeccCCCcc--------e---eeeecccccCceeee
Confidence 34456788999999999999965 489999999999999999876321 1 111112244566788
Q ss_pred CCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEccCCceEEeeeccc
Q psy9598 627 SPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS-HLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705 (1915)
Q Consensus 627 spdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspd-g~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~ 705 (1915)
+-....+.+.+....|++||++.+..+ +..+.+|...|.++.|..- ...+++++.||+|+.||..........
T Consensus 167 nyk~p~vlasshg~~i~vwd~r~gs~p--l~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~---- 240 (1081)
T KOG0309|consen 167 NYKDPNVLASSHGNDIFVWDLRKGSTP--LCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKR---- 240 (1081)
T ss_pred cccCcchhhhccCCceEEEeccCCCcc--eEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccce----
Confidence 876555666667778999999755544 5567889999999988643 347889999999999998654311100
Q ss_pred ccCCCCccccccccccccEEEEEECCCCCEEEE--EEe--------cCCeEEEEECCC-CceEEEeeCCCCCeEEEEEcc
Q psy9598 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVIT--AIN--------FNFQIKIWDAFN-GDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t--~s~--------~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl~~sp 774 (1915)
.......|+.-++.|-|.-.++ ..+ -+.....|+..+ .+++++|.||...|....|-.
T Consensus 241 -----------~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~ 309 (1081)
T KOG0309|consen 241 -----------TVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRK 309 (1081)
T ss_pred -----------eccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhh
Confidence 0112223333334343322111 111 023334455444 468999999999886665542
Q ss_pred C---------CCCEEEEEecCceEEEEECCCC
Q psy9598 775 F---------DSRVLLSAGHDGLIIIWDILSS 797 (1915)
Q Consensus 775 ~---------dg~~LaSgs~DG~I~IWdl~s~ 797 (1915)
. ..-.|+|-+.|.++++|-+.+.
T Consensus 310 r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~~ 341 (1081)
T KOG0309|consen 310 RKECDGDYDSRDFQLVTWSKDQTLRLWPIDSQ 341 (1081)
T ss_pred cccccCCCCccceeEEEeecCCceEeeeccHH
Confidence 1 1236999999999999999653
No 355
>KOG2041|consensus
Probab=99.00 E-value=2e-08 Score=121.92 Aligned_cols=291 Identities=15% Similarity=0.166 Sum_probs=195.5
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc---------------eEEEeecCCCCeEEEEeccCccCCCcEEEEE
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA---------------PISVLVGHQGIITGVNFCPLEVNGFNYLAST 582 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~---------------~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg 582 (1915)
.....|++|+....+||+|+.||.++|..+.+.. .-+++.||.+.|.-+.|+.. .+.|-+.
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~----~QKLTtS 89 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNEN----NQKLTTS 89 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccc----ccccccc
Confidence 3467899999999999999999999999886421 13467899999999999874 4888999
Q ss_pred eCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccC
Q psy9598 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH 662 (1915)
Q Consensus 583 s~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h 662 (1915)
..+|.|.+|-+-.+.....+... ...+.|.+++|+.+|..|.....||.|.|=.+++..-... .+.
T Consensus 90 Dt~GlIiVWmlykgsW~EEMiNn----------RnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgK--eLk-- 155 (1189)
T KOG2041|consen 90 DTSGLIIVWMLYKGSWCEEMINN----------RNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGK--ELK-- 155 (1189)
T ss_pred CCCceEEEEeeecccHHHHHhhC----------cCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecch--hcc--
Confidence 99999999988776543333222 2246789999999999999999999998888754332111 111
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEEC--------CCCC
Q psy9598 663 SDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWD--------ASDR 734 (1915)
Q Consensus 663 ~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~s--------pdg~ 734 (1915)
......+.|++|...++.+-..|.+.++|.+..-......+.... . ..........|..+.|. |+..
T Consensus 156 g~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn--~---tg~~s~~~~kia~i~w~~g~~~~v~pdrP 230 (1189)
T KOG2041|consen 156 GQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVN--G---TGIFSNFPTKIAEIEWNTGPYQPVPPDRP 230 (1189)
T ss_pred hheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEe--e---eeeecCCCccccceeeccCccccCCCCCC
Confidence 122346789999998888889999999997654221111111000 0 01111122234445553 5677
Q ss_pred EEEEEEecCCeEEEEECCCC-ceEEEeeCCCCCeEEEEEccCCCCEEEEEecCc---------eEEEEECCCCcccccee
Q psy9598 735 WVITAINFNFQIKIWDAFNG-DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG---------LIIIWDILSSKQRGYKW 804 (1915)
Q Consensus 735 ~L~t~s~~Dg~I~vwD~~tg-~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG---------~I~IWdl~s~~~~~~~~ 804 (1915)
.|+++-. +|.+.|....+. .++..-.| -.|..+.|++ +|.+|+.+|.|. .|.+|... |.. +.+
T Consensus 231 ~lavcy~-nGr~QiMR~eND~~Pvv~dtg--m~~vgakWnh-~G~vLAvcG~~~da~~~~d~n~v~Fysp~-G~i--~gt 303 (1189)
T KOG2041|consen 231 RLAVCYA-NGRMQIMRSENDPEPVVVDTG--MKIVGAKWNH-NGAVLAVCGNDSDADEPTDSNKVHFYSPY-GHI--VGT 303 (1189)
T ss_pred EEEEEEc-CceehhhhhcCCCCCeEEecc--cEeecceecC-CCcEEEEccCcccccCccccceEEEeccc-hhh--eEE
Confidence 7888877 888888755443 33322223 4588899999 999999998753 34444432 222 333
Q ss_pred eeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9598 805 FHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 805 ~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
+. .....|++++|-..|-.+|.+-. +.|++=++.
T Consensus 304 lk-----vpg~~It~lsWEg~gLriA~Avd-sfiyfanIR 337 (1189)
T KOG2041|consen 304 LK-----VPGSCITGLSWEGTGLRIAIAVD-SFIYFANIR 337 (1189)
T ss_pred Ee-----cCCceeeeeEEcCCceEEEEEec-ceEEEEeec
Confidence 33 23357899999988888877654 567666654
No 356
>KOG1064|consensus
Probab=98.99 E-value=3.2e-09 Score=140.23 Aligned_cols=196 Identities=14% Similarity=0.199 Sum_probs=156.5
Q ss_pred ecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEe-CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q psy9598 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR-GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 550 (1915)
Q Consensus 472 l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~-gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg 550 (1915)
+..|-..|.|+.-+|...+.+||+.||.|++|....+..+..++ +..+.|+.+.|+.+|+.+..+..||.+.+|.+. .
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-p 2282 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-P 2282 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-C
Confidence 44567889999999999999999999999999999998887775 234889999999999999999999999999987 6
Q ss_pred ceEEEeecCCCCeEEEEeccCccCCCcEEEEEe---CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEEC
Q psy9598 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTS---TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 627 (1915)
Q Consensus 551 ~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs---~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs 627 (1915)
++....+.|......+.|.. ..+++++ .++.+.+||..-...... . ...|.+.++|+++.
T Consensus 2283 k~~~s~qchnk~~~Df~Fi~------s~~~tag~s~d~~n~~lwDtl~~~~~s~---------v--~~~H~~gaT~l~~~ 2345 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIG------SLLATAGRSSDNRNVCLWDTLLPPMNSL---------V--HTCHDGGATVLAYA 2345 (2439)
T ss_pred cceeccccCCccccceeeee------hhhhccccCCCCCcccchhcccCcccce---------e--eeecCCCceEEEEc
Confidence 77788889999999999975 4666654 568999999643321111 1 14678899999999
Q ss_pred CCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceE
Q psy9598 628 PGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698 (1915)
Q Consensus 628 pdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~ 698 (1915)
|...+|++||.+|.|+|||++. ...++.+.. +. ...+|++|+..|.|+||++.....+
T Consensus 2346 P~~qllisggr~G~v~l~D~rq---rql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2346 PKHQLLISGGRKGEVCLFDIRQ---RQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred CcceEEEecCCcCcEEEeehHH---HHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchh
Confidence 9999999999999999999942 222222222 33 5668999999999999998876543
No 357
>KOG4547|consensus
Probab=98.98 E-value=4.5e-08 Score=119.25 Aligned_cols=189 Identities=14% Similarity=0.184 Sum_probs=149.8
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCcEEEEEeC---CCCCEEEEEEe--------------------CCCCEEEEEeCCCc
Q psy9598 485 DKLGEVIVTGADDLLIKLWRARDGKLLATLRG---CSGEISDIAID--------------------NRNILLAAGTVDKT 541 (1915)
Q Consensus 485 spdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~g---H~~~I~~Lafs--------------------pdg~~LaSgs~Dgt 541 (1915)
.|-+.++|..+.||.++||++.++++...|.. -++..+++.|. .+..+|+-|...|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 35578999999999999999999988776642 24455666662 23457888889999
Q ss_pred EEEEECCCCceEEEee--cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 542 IRIWNLQTLAPISVLV--GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 542 IrVWDl~tg~~~~~l~--~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
|.+|++..|+....+. +|.+.|+++.++. +...|.+++.|+.+..|+......+.... ....
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~----~~~ciyS~~ad~~v~~~~~~~~~~~~~~~------------~~~~ 145 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQ----RLGCIYSVGADLKVVYILEKEKVIIRIWK------------EQKP 145 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeeccc----ccCceEecCCceeEEEEecccceeeeeec------------cCCC
Confidence 9999999999888776 5999999999987 44899999999999999988775433332 2345
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCC-----CCEEEEE-eCCCcEEEEEcc
Q psy9598 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS-----HLRFVSG-SRDGTALIWYYK 693 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspd-----g~~L~sg-s~DG~I~IWDl~ 693 (1915)
.+.+++++|||..|++|+. .|++||+ .....+..+.||.++|.+++|.-. |.+|+++ ..+..|.+|-+.
T Consensus 146 ~~~sl~is~D~~~l~~as~--~ik~~~~---~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 146 LVSSLCISPDGKILLTASR--QIKVLDI---ETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred ccceEEEcCCCCEEEeccc--eEEEEEc---cCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 6889999999999998875 8999999 566788899999999999999876 6666554 456668888654
Q ss_pred C
Q psy9598 694 C 694 (1915)
Q Consensus 694 ~ 694 (1915)
.
T Consensus 221 ~ 221 (541)
T KOG4547|consen 221 K 221 (541)
T ss_pred c
Confidence 3
No 358
>KOG1064|consensus
Probab=98.98 E-value=3.1e-09 Score=140.36 Aligned_cols=196 Identities=19% Similarity=0.291 Sum_probs=148.5
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceE
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~ 698 (1915)
..|.++.-+|...+.++|+.||.|++|.... ..........|. ..|+.+.|+.+|+.+..+..||.+.+|.+...-
T Consensus 2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~-~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~-- 2284 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGH-GQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKP-- 2284 (2439)
T ss_pred CceeeecCCCCCceEEecCCCceEEEEeccC-CCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccCCcc--
Confidence 4678888889888999999999999999833 222222223333 889999999999999999999999999765221
Q ss_pred EeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEE--ecCCeEEEEECCC---CceEEEeeCCCCCeEEEEEc
Q psy9598 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI--NFNFQIKIWDAFN---GDLVQVLKGHTNEVFVLESH 773 (1915)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s--~~Dg~I~vwD~~t---g~~i~~l~gH~~~V~sl~~s 773 (1915)
......|....+.+.|-. ..+++++ ..++.+.+||..- ..+++ ..|.+.++++++.
T Consensus 2285 ---------------~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~ 2345 (2439)
T KOG1064|consen 2285 ---------------YTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYA 2345 (2439)
T ss_pred ---------------eeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEc
Confidence 112223444455555544 4455544 2477899999642 23444 7899999999999
Q ss_pred cCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccccCC
Q psy9598 774 PFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIP 853 (1915)
Q Consensus 774 p~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~ 853 (1915)
| ...+|+|||.+|.|+|||+...+. ...+. . +. ...+|++|+..|.|.||++.....+.++|
T Consensus 2346 P-~~qllisggr~G~v~l~D~rqrql--~h~~~----------~----~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2346 P-KHQLLISGGRKGEVCLFDIRQRQL--RHTFQ----------A----LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred C-cceEEEecCCcCcEEEeehHHHHH--HHHhh----------h----hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 9 889999999999999999988777 44444 1 44 56789999999999999999998888888
Q ss_pred Cc
Q psy9598 854 RE 855 (1915)
Q Consensus 854 ~~ 855 (1915)
.+
T Consensus 2408 ~e 2409 (2439)
T KOG1064|consen 2408 SE 2409 (2439)
T ss_pred hh
Confidence 73
No 359
>KOG4190|consensus
Probab=98.97 E-value=1.5e-09 Score=127.82 Aligned_cols=287 Identities=12% Similarity=0.105 Sum_probs=184.4
Q ss_pred EEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC-------CCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcE
Q psy9598 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-------DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTI 542 (1915)
Q Consensus 470 ~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~-------tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtI 542 (1915)
..+.||...|..++--.+.+-+++++.|.+|++|++. |..+..++..|..+|.++.|-.+.++++++ ||-|
T Consensus 729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~gi 806 (1034)
T KOG4190|consen 729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGI 806 (1034)
T ss_pred ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcc
Confidence 4678999999999887788889999999999999975 335788899999999999999998888764 7899
Q ss_pred EEEECCCCceEEEeec--CCCCeEEEEeccCccCCCcEEEEE-eCCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 543 RIWNLQTLAPISVLVG--HQGIITGVNFCPLEVNGFNYLAST-STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 543 rVWDl~tg~~~~~l~~--h~~~V~sl~fsp~~~~d~~~L~sg-s~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
.+||.--|.++..+.. ..+.+..|...+.- +..+++.| +...+|+++|.+............ ..+.++
T Consensus 807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv--~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn-------a~~Pna 877 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENV--DRHILIAGCSAESTVKLFDARSCEWTCELKVCN-------APGPNA 877 (1034)
T ss_pred eeecccccchhHhhhcCcccCCCceeEecccC--cchheeeeccchhhheeeecccccceeeEEecc-------CCCCch
Confidence 9999887777663321 22333334333421 23455554 778999999998876544433321 112346
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEE-EEccCCceE
Q psy9598 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI-WYYKCSQWR 698 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~I-WDl~~~~~~ 698 (1915)
.+.|+++.+.|+++++|-.+|+|.+.|.+++ ..+..+.........++ .|....|+....|.++.+ |-.-.+...
T Consensus 878 ~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G---~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh 953 (1034)
T KOG4190|consen 878 LTRAIAVADKGNKLAAALSNGCIAILDARNG---KVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMH 953 (1034)
T ss_pred heeEEEeccCcchhhHHhcCCcEEEEecCCC---ceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeee
Confidence 7899999999999999999999999998543 23333333322233332 356667888888888888 865444322
Q ss_pred EeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC----CceEEEee--CCCCCeEEEEE
Q psy9598 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN----GDLVQVLK--GHTNEVFVLES 772 (1915)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t----g~~i~~l~--gH~~~V~sl~~ 772 (1915)
.. ...+..+. |. +-.-|..|+++.. ...+.||--.. ...+..+. ...+..++++.
T Consensus 954 ~q-----~kpppepa------hf-------lqsvgpSLV~a~~-Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~ 1014 (1034)
T KOG4190|consen 954 LQ-----DKPPPEPA------HF-------LQSVGPSLVTAQN-GNILGVYADSAELHAESTITKIRPDEFPGTLTALAP 1014 (1034)
T ss_pred ec-----cCCCCcch------hh-------hhccCceeEEecc-CcEEEEEecchhhhhhhhhccccccccCCccceeee
Confidence 11 01111000 00 0112445555555 55566664211 11122222 22456778888
Q ss_pred ccCCCCEEEEEecCceEEE
Q psy9598 773 HPFDSRVLLSAGHDGLIII 791 (1915)
Q Consensus 773 sp~dg~~LaSgs~DG~I~I 791 (1915)
-| -..-++.|...|.|.+
T Consensus 1015 LP-LN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 1015 LP-LNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred cc-ccchhhccCCCCceee
Confidence 88 4444566878888765
No 360
>KOG2314|consensus
Probab=98.96 E-value=1.5e-07 Score=112.58 Aligned_cols=293 Identities=14% Similarity=0.154 Sum_probs=178.6
Q ss_pred eEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEEC-----------CCcEEEEECCCCcEEEEEeCC--CCCE
Q psy9598 455 SLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGAD-----------DLLIKLWRARDGKLLATLRGC--SGEI 521 (1915)
Q Consensus 455 ~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~-----------Dg~I~IWd~~tg~~~~~l~gH--~~~I 521 (1915)
.+.+|+. ..+...+++ .| -.|.-+.|||+.+||+|-|. ...|+|||+.||.+.+.|... ...+
T Consensus 232 GI~lWGG--~~f~r~~RF-~H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~ 307 (698)
T KOG2314|consen 232 GIALWGG--ESFDRIQRF-YH-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLK 307 (698)
T ss_pred ceeeecC--ccHHHHHhc-cC-CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccc
Confidence 4556643 233333444 35 45888999999999999764 147999999999999888652 2233
Q ss_pred E-EEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC-----CCeEEEEeccc
Q psy9598 522 S-DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST-----DGCIGFWKYKL 595 (1915)
Q Consensus 522 ~-~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~-----DgtI~iWDl~~ 595 (1915)
. -..||.|++++|--.. .+|.|++..+..++-.-.-....|....|+|.+ ++||.=+- -..+.+-.+-+
T Consensus 308 WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~----~llAYwtpe~~~~parvtL~evPs 382 (698)
T KOG2314|consen 308 WPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTS----NLLAYWTPETNNIPARVTLMEVPS 382 (698)
T ss_pred cceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCc----ceEEEEcccccCCcceEEEEecCc
Confidence 3 3589999999998776 469999987644332222234678888999943 44443221 12333333333
Q ss_pred CccccceeccCccccccccCCCCCceEEEEECCCCcEEEEE----------eCCCeEEEEEecCCCCCceeEEeccCCCC
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG----------SGDHHVRVYKMDGVDSPLGILEVEEHSDK 665 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasg----------s~Dg~I~IwDl~~~~~~~~i~~l~~h~~~ 665 (1915)
++.+.+..+. +..=..+-|-.+|.+|+.- |.-..+-|+.++....+.... .....
T Consensus 383 ~~~iRt~nlf------------nVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v---elke~ 447 (698)
T KOG2314|consen 383 KREIRTKNLF------------NVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV---ELKES 447 (698)
T ss_pred cceeeeccce------------eeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceee---ecchh
Confidence 3322222211 1111234455566666542 222245667665444443333 24567
Q ss_pred eeEEEEcCCCCEEEEEeCC---CcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe-
Q psy9598 666 VDSIQWSHSHLRFVSGSRD---GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN- 741 (1915)
Q Consensus 666 V~sl~fspdg~~L~sgs~D---G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~- 741 (1915)
|..++|-|.|+.|++-+.. .++.+|-+.+.... ..... .-.....+.|.|+|.|++++++.-
T Consensus 448 vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~------------~~lVk--~~dk~~~N~vfwsPkG~fvvva~l~ 513 (698)
T KOG2314|consen 448 VIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK------------PSLVK--ELDKKFANTVFWSPKGRFVVVAALV 513 (698)
T ss_pred eeeeeeccCCCeEEEEEccccccceeEEEeecCCCc------------hhhhh--hhcccccceEEEcCCCcEEEEEEec
Confidence 8999999999988765543 56778766632100 00111 112245678999999999988764
Q ss_pred -cCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecC
Q psy9598 742 -FNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 742 -~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D 786 (1915)
..|.+.++|+....+..+-.......+.+.|.| .|++++|++.-
T Consensus 514 s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDP-tGRYvvT~ss~ 558 (698)
T KOG2314|consen 514 SRRGDLEFYDTDYADLKDTASPEHFAATEVEWDP-TGRYVVTSSSS 558 (698)
T ss_pred ccccceEEEecchhhhhhccCccccccccceECC-CCCEEEEeeeh
Confidence 278899999875333333222223467889999 99999999854
No 361
>cd05494 Bromodomain_1 Bromodomain; uncharacterized subfamily. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=98.96 E-value=2.6e-10 Score=115.35 Aligned_cols=78 Identities=19% Similarity=0.166 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCC--CCCCCccccccCccchhhHHhhhcCC-------CCCCHHHHHHHHHHHHHHh
Q psy9598 1534 KNECREVLETLWVCPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGD-------NYESPIDFVKDVKRVFHNS 1604 (1915)
Q Consensus 1534 ~~~~~~ll~~l~~~~~s~~F~~pv~~--~~~pdY~~iIk~Pmdl~tI~~kl~~~-------~Y~s~~ef~~Dv~lif~Na 1604 (1915)
...|.++|..++.++.++||..||++ .++||||++||+||||+||+++|..+ .|..-..+.+++..++.||
T Consensus 5 ~~~~l~~l~~~~~~~~~~pF~~PVd~~~~~~pdY~~iIK~PMDL~ti~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (114)
T cd05494 5 LERVLRELKRHRRNEDAWPFLEPVNPPRRGAPDYRDVIKRPMSFGTKVNNIVETGARDLEDLQIVQEDPADKQIDDEGRR 84 (114)
T ss_pred HHHHHHHHHHhhhCCCCCCcCCCCCchhcCCCChhhhcCCCCChHHHHHHHHcccccccccccccccccccccccccccc
Confidence 35577777777778899999999998 89999999999999999999999987 4555566777888888888
Q ss_pred hhhcCCC
Q psy9598 1605 RNYNQNK 1611 (1915)
Q Consensus 1605 ~~yN~~~ 1611 (1915)
..+|.-.
T Consensus 85 ~~~~~~~ 91 (114)
T cd05494 85 SPSNIYA 91 (114)
T ss_pred Ccccccc
Confidence 8877643
No 362
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.94 E-value=1.2e-08 Score=113.71 Aligned_cols=291 Identities=17% Similarity=0.215 Sum_probs=181.8
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-----cEEEEEeCCCC------------CEEEEEEeCCCC--EEEEE
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG-----KLLATLRGCSG------------EISDIAIDNRNI--LLAAG 536 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg-----~~~~~l~gH~~------------~I~~Lafspdg~--~LaSg 536 (1915)
..-|++|.|...|.||+||...|.|.+|.-... +....|.+|.. .|..|.|..++. .++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 467999999999999999999999999975432 23344667743 578888876543 45555
Q ss_pred eCCCcEEEEECCCCceEEEeec---------CCCCeEEEEeccCccCCCcEEE-EEe-CCCeEEEEecccCccccceecc
Q psy9598 537 TVDKTIRIWNLQTLAPISVLVG---------HQGIITGVNFCPLEVNGFNYLA-STS-TDGCIGFWKYKLDIDISKTVFH 605 (1915)
Q Consensus 537 s~DgtIrVWDl~tg~~~~~l~~---------h~~~V~sl~fsp~~~~d~~~L~-sgs-~DgtI~iWDl~~~~~~~~~~~~ 605 (1915)
+.|.+|++|.+.......+... ..+++++.. .+++ -.+ .|..|...-
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~---------~l~lprls~hd~iiaa~p------------- 163 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTK---------ELLLPRLSEHDEIIAAKP------------- 163 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHH---------HhhcccccccceEEEecc-------------
Confidence 6799999999865322111110 011111110 0000 000 111111110
Q ss_pred CccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC-----CCeeEEEEcCCC-CEEE
Q psy9598 606 EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS-----DKVDSIQWSHSH-LRFV 679 (1915)
Q Consensus 606 ~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~-----~~V~sl~fspdg-~~L~ 679 (1915)
. ......|...|.+++|+.+..+++++ .|-.|.+|++.-......+..+..|. .-|++..|+|.. ..|.
T Consensus 164 --~--rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fm 238 (460)
T COG5170 164 --C--RVYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFM 238 (460)
T ss_pred --c--eeccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEE
Confidence 0 00113566779999999998888776 56789999997655555666666664 357888899864 4677
Q ss_pred EEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCC-CceEE
Q psy9598 680 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-GDLVQ 758 (1915)
Q Consensus 680 sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-g~~i~ 758 (1915)
-++..|.|++-|++..........+...................|..+.|+++|++|++-.. .+|+|||+.. ..++.
T Consensus 239 YSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy--ltvkiwDvnm~k~pik 316 (460)
T COG5170 239 YSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY--LTVKIWDVNMAKNPIK 316 (460)
T ss_pred EecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc--ceEEEEecccccCCce
Confidence 77889999999998544211000000000000111122334467888999999999988764 6899999975 45777
Q ss_pred EeeCCCC------------Ce---EEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 759 VLKGHTN------------EV---FVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 759 ~l~gH~~------------~V---~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
++.-|.. .| ..+.|+. +...+++|+.....-||-+.+
T Consensus 317 Ti~~h~~l~~~l~d~YEnDaifdkFeisfSg-d~~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 317 TIPMHCDLMDELNDVYENDAIFDKFEISFSG-DDKHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred eechHHHHHHHHHhhhhccceeeeEEEEecC-Ccccccccccccceeeecccc
Confidence 7765532 23 4567887 778888998888877776443
No 363
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.94 E-value=2.3e-07 Score=117.88 Aligned_cols=246 Identities=15% Similarity=0.088 Sum_probs=143.9
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCc-EEEEEeCCC--eEEEEecccCccccceeccCccccccccCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN-YLASTSTDG--CIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~-~L~sgs~Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
+.|.+.|...+... .+..+...+.+-.|+|++ ... ++++...+| .|.+.++.++.......+
T Consensus 165 ~~l~~~d~dG~~~~-~lt~~~~~~~sP~wSPDG--~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~------------ 229 (428)
T PRK01029 165 GELWSVDYDGQNLR-PLTQEHSLSITPTWMHIG--SGFPYLYVSYKLGVPKIFLGSLENPAGKKILAL------------ 229 (428)
T ss_pred ceEEEEcCCCCCce-EcccCCCCcccceEccCC--CceEEEEEEccCCCceEEEEECCCCCceEeecC------------
Confidence 36777787655543 344455566788999964 111 233444444 466667776643211111
Q ss_pred CCCceEEEEECCCCcEEEEEeC-CC----eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEe-CCCcEEEE
Q psy9598 617 GNAHILCSSFSPGGLFLATGSG-DH----HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS-RDGTALIW 690 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~Lasgs~-Dg----~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs-~DG~I~IW 690 (1915)
.+.....+|||||+.|+..+. +| .+.+|++.............++.+.....+|+|+|..|+..+ .+|...||
T Consensus 230 -~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly 308 (428)
T PRK01029 230 -QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIY 308 (428)
T ss_pred -CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEE
Confidence 133456799999988886553 22 344466643211111112222334456789999999877665 56766666
Q ss_pred EccC--CceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecC--CeEEEEECCCCceEEEeeCCCCC
Q psy9598 691 YYKC--SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN--FQIKIWDAFNGDLVQVLKGHTNE 766 (1915)
Q Consensus 691 Dl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~D--g~I~vwD~~tg~~i~~l~gH~~~ 766 (1915)
.+.. .... ..........+...+|+|||+.|+.++..+ ..|.+||+.+++.... ......
T Consensus 309 ~~~~~~~g~~---------------~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~L-t~~~~~ 372 (428)
T PRK01029 309 IMQIDPEGQS---------------PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQL-TTSPEN 372 (428)
T ss_pred EEECcccccc---------------eEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEc-cCCCCC
Confidence 4421 1100 000111223456789999999998776523 4799999988876543 333445
Q ss_pred eEEEEEccCCCCEEEEEec---CceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCC
Q psy9598 767 VFVLESHPFDSRVLLSAGH---DGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDG 826 (1915)
Q Consensus 767 V~sl~~sp~dg~~LaSgs~---DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg 826 (1915)
+....|+| +++.|+..+. .+.|++||+.++.. .... ...+.+...+|+|-.
T Consensus 373 ~~~p~wSp-DG~~L~f~~~~~g~~~L~~vdl~~g~~--~~Lt------~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 373 KESPSWAI-DSLHLVYSAGNSNESELYLISLITKKT--RKIV------IGSGEKRFPSWGAFP 426 (428)
T ss_pred ccceEECC-CCCEEEEEECCCCCceEEEEECCCCCE--EEee------cCCCcccCceecCCC
Confidence 67889999 8887764432 35788999987765 2211 133456677888753
No 364
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.94 E-value=2.8e-07 Score=117.16 Aligned_cols=244 Identities=12% Similarity=-0.010 Sum_probs=146.7
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEE---EEEeCC--CcEEEEECCCCceEEEeecCCCCeEEEEeccCc
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL---AAGTVD--KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~L---aSgs~D--gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~ 572 (1915)
+.|.+.|...+... .+..+...+.+-+|+|||+.+ ++...+ ..|.+.++.+|..... ....+.....+|+|+
T Consensus 165 ~~l~~~d~dG~~~~-~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~l-t~~~g~~~~p~wSPD- 241 (428)
T PRK01029 165 GELWSVDYDGQNLR-PLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKI-LALQGNQLMPTFSPR- 241 (428)
T ss_pred ceEEEEcCCCCCce-EcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEe-ecCCCCccceEECCC-
Confidence 36777777555443 344455667788999999742 244333 3588889887765433 334455567899995
Q ss_pred cCCCcEEEEEeC-CC----eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEe-CCCeEEEEE
Q psy9598 573 VNGFNYLASTST-DG----CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS-GDHHVRVYK 646 (1915)
Q Consensus 573 ~~d~~~L~sgs~-Dg----tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~IwD 646 (1915)
++.|+..+. +| .+.+|++..+..-..... ...........+|+|||+.|+..+ .+|...||.
T Consensus 242 ---G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~l---------t~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~ 309 (428)
T PRK01029 242 ---KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRL---------LNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYI 309 (428)
T ss_pred ---CCEEEEEECCCCCcceeEEEeecccCCCCcceEe---------ecCCCCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence 466665442 23 344466654311000000 001112335679999999877665 466656665
Q ss_pred ecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC---CcEEEEEccCCceEEeeecccccCCCCcccccccccccc
Q psy9598 647 MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD---GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723 (1915)
Q Consensus 647 l~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D---G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1915)
+...........+..+...+....|+|+|+.|+..+.+ ..|.+||+.+++...+.. ....
T Consensus 310 ~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-----------------~~~~ 372 (428)
T PRK01029 310 MQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT-----------------SPEN 372 (428)
T ss_pred EECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC-----------------CCCC
Confidence 42111111223344455667888999999988876543 368899998877443210 1123
Q ss_pred EEEEEECCCCCEEEEEEec--CCeEEEEECCCCceEEEeeCCCCCeEEEEEcc
Q psy9598 724 VTMVAWDASDRWVITAINF--NFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774 (1915)
Q Consensus 724 V~~va~spdg~~L~t~s~~--Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp 774 (1915)
+....|+|||+.|+..... ...|++||+.+++..... ...+.+...+|+|
T Consensus 373 ~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt-~~~g~~~~p~Ws~ 424 (428)
T PRK01029 373 KESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV-IGSGEKRFPSWGA 424 (428)
T ss_pred ccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCcccCceecC
Confidence 4568899999998865532 357889999877654444 3445567788887
No 365
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.93 E-value=1.2e-07 Score=121.33 Aligned_cols=213 Identities=15% Similarity=0.094 Sum_probs=136.6
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCC---CeEEEEecccCccccceeccCccccccccCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD---GCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D---gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
..|.++|...+. ...+..+...+.+..|+|+ +++|+.++.. ..|.+||+.++...... .
T Consensus 170 ~~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spd----g~~la~~~~~~~~~~i~v~d~~~g~~~~~~-------------~ 231 (417)
T TIGR02800 170 YELQVADYDGAN-PQTITRSREPILSPAWSPD----GQKLAYVSFESGKPEIYVQDLATGQREKVA-------------S 231 (417)
T ss_pred ceEEEEcCCCCC-CEEeecCCCceecccCCCC----CCEEEEEEcCCCCcEEEEEECCCCCEEEee-------------c
Confidence 368888886443 4555567778899999994 4777776644 47999999876421111 1
Q ss_pred CCCceEEEEECCCCcEEEE-EeCCC--eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-CC--cEEEE
Q psy9598 617 GNAHILCSSFSPGGLFLAT-GSGDH--HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-DG--TALIW 690 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~Las-gs~Dg--~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG--~I~IW 690 (1915)
+.+.+.+++|+|+|+.|+. .+.++ .|++|++.+.. ...+..+.......+|+++|..|+.++. +| .|.+|
T Consensus 232 ~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~ 307 (417)
T TIGR02800 232 FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ----LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMM 307 (417)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCC----EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 1244567899999987764 44444 58888874321 2334445555567789999998876654 34 46677
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC---eEEEEECCCCceEEEeeCCCCCe
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF---QIKIWDAFNGDLVQVLKGHTNEV 767 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg---~I~vwD~~tg~~i~~l~gH~~~V 767 (1915)
++.++....+. .....+..++|+|+|.+|+.+.. ++ .|.+||+.++... .+..+ ...
T Consensus 308 d~~~~~~~~l~-----------------~~~~~~~~~~~spdg~~i~~~~~-~~~~~~i~~~d~~~~~~~-~l~~~-~~~ 367 (417)
T TIGR02800 308 DADGGEVRRLT-----------------FRGGYNASPSWSPDGDLIAFVHR-EGGGFNIAVMDLDGGGER-VLTDT-GLD 367 (417)
T ss_pred ECCCCCEEEee-----------------cCCCCccCeEECCCCCEEEEEEc-cCCceEEEEEeCCCCCeE-EccCC-CCC
Confidence 77665532211 12234566889999999998876 54 7999999876543 33322 224
Q ss_pred EEEEEccCCCCEEEEEecCc---eEEEEECC
Q psy9598 768 FVLESHPFDSRVLLSAGHDG---LIIIWDIL 795 (1915)
Q Consensus 768 ~sl~~sp~dg~~LaSgs~DG---~I~IWdl~ 795 (1915)
....|+| ++.+|+.++.++ .+.+.+..
T Consensus 368 ~~p~~sp-dg~~l~~~~~~~~~~~l~~~~~~ 397 (417)
T TIGR02800 368 ESPSFAP-NGRMILYATTRGGRGVLGLVSTD 397 (417)
T ss_pred CCceECC-CCCEEEEEEeCCCcEEEEEEECC
Confidence 5568999 888777776654 34555543
No 366
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.92 E-value=1.1e-06 Score=106.56 Aligned_cols=275 Identities=13% Similarity=0.048 Sum_probs=163.1
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEe----------CCCeEEEEecccCccccceeccCccc
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS----------TDGCIGFWKYKLDIDISKTVFHEPVM 609 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs----------~DgtI~iWDl~~~~~~~~~~~~~~~~ 609 (1915)
++|.|.|..+++.+..+..-..+- .+ ++|++ ..|++++ .+..|.+||..+...+..+.......
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg----~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~ 100 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDG----SFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR 100 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCC----CEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch
Confidence 889999999999998887544333 24 88843 5555554 47899999999987766555431100
Q ss_pred cccccCCCCCceEEEEECCCCcEEEEEe-C-CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcE
Q psy9598 610 FNERIRPGNAHILCSSFSPGGLFLATGS-G-DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTA 687 (1915)
Q Consensus 610 ~~~~~~~~~~~V~~l~fspdg~~Lasgs-~-Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I 687 (1915)
+. .......++++|+|++|++.. . +..|.++|+.. ...+..+.- .+...-+..+.+. +.+-+.||..
T Consensus 101 ~~-----~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~---~kvv~ei~v-p~~~~vy~t~e~~--~~~~~~Dg~~ 169 (352)
T TIGR02658 101 FL-----VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEG---KAFVRMMDV-PDCYHIFPTANDT--FFMHCRDGSL 169 (352)
T ss_pred hh-----ccCccceEEECCCCCEEEEecCCCCCEEEEEECCC---CcEEEEEeC-CCCcEEEEecCCc--cEEEeecCce
Confidence 00 113345789999999988766 3 68999999943 233333322 1111122222221 1223345554
Q ss_pred EEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECC-CCCEEEEEEecCCeEEEEECCC-----CceEEEee
Q psy9598 688 LIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA-SDRWVITAINFNFQIKIWDAFN-----GDLVQVLK 761 (1915)
Q Consensus 688 ~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~sp-dg~~L~t~s~~Dg~I~vwD~~t-----g~~i~~l~ 761 (1915)
....+.......... ....... ...-...+ .|++ +|.+++++. .|.|.+.|+.. ...+..+.
T Consensus 170 ~~v~~d~~g~~~~~~--~~vf~~~----~~~v~~rP----~~~~~dg~~~~vs~--eG~V~~id~~~~~~~~~~~~~~~~ 237 (352)
T TIGR02658 170 AKVGYGTKGNPKIKP--TEVFHPE----DEYLINHP----AYSNKSGRLVWPTY--TGKIFQIDLSSGDAKFLPAIEAFT 237 (352)
T ss_pred EEEEecCCCceEEee--eeeecCC----ccccccCC----ceEcCCCcEEEEec--CCeEEEEecCCCcceecceeeecc
Confidence 443333221111000 0000000 00000111 3345 788887776 49999999543 33333332
Q ss_pred C-------CCCCeEEEEEccCCCCEEEEEec----------CceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 762 G-------HTNEVFVLESHPFDSRVLLSAGH----------DGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 762 g-------H~~~V~sl~~sp~dg~~LaSgs~----------DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
. ..+.+.-+++++ +++.|+.+.. .+.|.++|..+++. +..+. ....+..++++|
T Consensus 238 ~~~~~~~wrP~g~q~ia~~~-dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv--i~~i~------vG~~~~~iavS~ 308 (352)
T TIGR02658 238 EAEKADGWRPGGWQQVAYHR-ARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKR--LRKIE------LGHEIDSINVSQ 308 (352)
T ss_pred ccccccccCCCcceeEEEcC-CCCEEEEEecCCccccccCCCCEEEEEECCCCeE--EEEEe------CCCceeeEEECC
Confidence 1 223444599999 7666666421 25799999998887 55554 224688999999
Q ss_pred CCC-EEEEEe-CCCeEEEEeCCCCcccccC
Q psy9598 825 DGT-TCALTD-SYGHLLVYGLGGFKRPQNI 852 (1915)
Q Consensus 825 dg~-~Lasg~-~dG~I~Iwdl~s~~~~~~l 852 (1915)
||+ +|+++. .++.|.|+|+.+++.+.++
T Consensus 309 Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 309 DAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 999 777666 6788999999999887776
No 367
>KOG0280|consensus
Probab=98.92 E-value=1.3e-07 Score=105.84 Aligned_cols=281 Identities=12% Similarity=0.087 Sum_probs=177.3
Q ss_pred CCcEEEEECCCCceEE--Ee-ecCCCCeEEEEeccCccCCCc-EEEEEeCCCeEEEEecccCccccceeccCcccccccc
Q psy9598 539 DKTIRIWNLQTLAPIS--VL-VGHQGIITGVNFCPLEVNGFN-YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERI 614 (1915)
Q Consensus 539 DgtIrVWDl~tg~~~~--~l-~~h~~~V~sl~fsp~~~~d~~-~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~ 614 (1915)
-|.+.++++...+.+. ++ ...+..++.+.|+--.. ++. .|+-+-..|.|.++..........+.. .....
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~-~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~---ls~~k-- 118 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRET-DGDFNLLDAHARGQIQLYRNDEDESSVHLRG---LSSKK-- 118 (339)
T ss_pred ccceEEEeecccccCccceeeeecccccceeeeeeccC-CccceeeeccccceEEEEeeccceeeeeecc---cchhh--
Confidence 3678888887654333 22 22345677788875442 334 677788889999997654432111111 10000
Q ss_pred CCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEcc
Q psy9598 615 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 615 ~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg-~~L~sgs~DG~I~IWDl~ 693 (1915)
-......++.|++.+..++++..+|.+.+-+. +......+..+++|.-.++...|+... +.+++|+.||.+..||++
T Consensus 119 -i~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~-t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R 196 (339)
T KOG0280|consen 119 -ISVVEALSLDISTSGTKIFVSDSRGSISGVYE-TEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIR 196 (339)
T ss_pred -hhheeeeEEEeeccCceEEEEcCCCcEEEEec-ceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEec
Confidence 00113568889999999999999999996655 223445556788999999999987543 588999999999999998
Q ss_pred CC-ceEEeeecccccCCCCccccccccccccEEEEEECCC-CCEEEEEEecCCeEEEEECCC-CceEEEeeCCCCCeEEE
Q psy9598 694 CS-QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDAS-DRWVITAINFNFQIKIWDAFN-GDLVQVLKGHTNEVFVL 770 (1915)
Q Consensus 694 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spd-g~~L~t~s~~Dg~I~vwD~~t-g~~i~~l~gH~~~V~sl 770 (1915)
.. .++. .....|...|.+|.-+|. ..+|++|+. |-.|++||.++ ++++..-. -.+.|+.+
T Consensus 197 ~p~~~i~---------------~n~kvH~~GV~SI~ss~~~~~~I~TGsY-De~i~~~DtRnm~kPl~~~~-v~GGVWRi 259 (339)
T KOG0280|consen 197 IPKTFIW---------------HNSKVHTSGVVSIYSSPPKPTYIATGSY-DECIRVLDTRNMGKPLFKAK-VGGGVWRI 259 (339)
T ss_pred CCcceee---------------ecceeeecceEEEecCCCCCceEEEecc-ccceeeeehhcccCccccCc-cccceEEE
Confidence 33 2221 112347788888888765 667777777 99999999984 66665433 33789999
Q ss_pred EEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEe-CCCeEE-EEeCCCC
Q psy9598 771 ESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTD-SYGHLL-VYGLGGF 846 (1915)
Q Consensus 771 ~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~-~dG~I~-Iwdl~s~ 846 (1915)
.++|.....|+.++.-.-.+|-++..+... ..... .....|.+-++...|..-..+||+|+ .|..++ +|--.++
T Consensus 260 ~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e-~~~~~-~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 260 KHHPEIFHRLLAACMHNGAKILDSSDKVLE-FQIVL-PSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred EecchhhhHHHHHHHhcCceEEEecccccc-hheee-eccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence 999965444444444344667777655442 11111 12234556667777755556677764 444433 6654443
No 368
>KOG4532|consensus
Probab=98.90 E-value=2.3e-07 Score=102.46 Aligned_cols=265 Identities=13% Similarity=0.022 Sum_probs=167.5
Q ss_pred CCcEEEEECCCCc--EEEEEeCCCCCEEEEEEeC-----CCCEEEEEeCCCcEEEEECCCCceE-EEeecCCCCeEEEEe
Q psy9598 497 DLLIKLWRARDGK--LLATLRGCSGEISDIAIDN-----RNILLAAGTVDKTIRIWNLQTLAPI-SVLVGHQGIITGVNF 568 (1915)
Q Consensus 497 Dg~I~IWd~~tg~--~~~~l~gH~~~I~~Lafsp-----dg~~LaSgs~DgtIrVWDl~tg~~~-~~l~~h~~~V~sl~f 568 (1915)
...|-+|++.+.. .+... ..|.|.| ...+||.|+.-|...+|.+.+.... .....|...|+-+.=
T Consensus 51 t~sv~i~~~y~N~~~iv~~y-------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r 123 (344)
T KOG4532|consen 51 TISVPINSHYSNPKGIVEFY-------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKR 123 (344)
T ss_pred eeeeEeccccCCchhhEEee-------ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhh
Confidence 3456677765443 22222 2234443 3458999999999999999865432 223334433322111
Q ss_pred ccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEec
Q psy9598 569 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648 (1915)
Q Consensus 569 sp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~ 648 (1915)
.- ....-+..++.|.++++.++..+..-....+. .-.+.++++++++.++++.+....|..|.++
T Consensus 124 ~c---d~~~~~~i~sndht~k~~~~~~~s~~~~~h~~------------~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id 188 (344)
T KOG4532|consen 124 YC---DLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQ------------NLTQNSLHYSNDPSWGSSVGDSRRVFRYAID 188 (344)
T ss_pred hc---ccccceeeccCCcceeEEEEecCcccceeecc------------ccceeeeEEcCCCceEEEecCCCcceEEEeC
Confidence 00 12245778899999999988766432111111 1237899999999999999999999999996
Q ss_pred CCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEE
Q psy9598 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVA 728 (1915)
Q Consensus 649 ~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va 728 (1915)
.......-.......+.-.+..|+.....||+++.||++.|||++..... ..........|.+.+..+.
T Consensus 189 ~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tp-----------m~~~sstrp~hnGa~R~c~ 257 (344)
T KOG4532|consen 189 DESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATP-----------MAEISSTRPHHNGAFRVCR 257 (344)
T ss_pred CccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccc-----------hhhhcccCCCCCCceEEEE
Confidence 54332222233444555678889999999999999999999999876521 1112223344889999999
Q ss_pred ECCCCC--EEEEEEecCCeEEEEECCCCceEEEeeC-------CC-CCeEEEEEccCCCCEEEEEecCceEEEEECCCC
Q psy9598 729 WDASDR--WVITAINFNFQIKIWDAFNGDLVQVLKG-------HT-NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 797 (1915)
Q Consensus 729 ~spdg~--~L~t~s~~Dg~I~vwD~~tg~~i~~l~g-------H~-~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~ 797 (1915)
|++.|. +|+.+-. =+.+.|.|++++.-...+.. |. ..|+...|+. ++.-+.+.+.+ .+.=|++.+.
T Consensus 258 Fsl~g~lDLLf~sEh-fs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~-~n~s~~v~~e~-~~ae~ni~sr 333 (344)
T KOG4532|consen 258 FSLYGLLDLLFISEH-FSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNN-ENESNDVKNEL-QGAEYNILSR 333 (344)
T ss_pred ecCCCcceEEEEecC-cceEEEEEcccCceeeEEecCccccccccccccccccccC-CCcccccccch-hhheeecccc
Confidence 998664 3444433 67899999999876555432 22 2367777776 44444444433 4556666543
No 369
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.88 E-value=3.3e-07 Score=117.39 Aligned_cols=234 Identities=16% Similarity=0.123 Sum_probs=140.6
Q ss_pred cEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC-CC--eEEEEecccCccccceeccCccccccccCCC
Q psy9598 541 TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST-DG--CIGFWKYKLDIDISKTVFHEPVMFNERIRPG 617 (1915)
Q Consensus 541 tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~-Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1915)
.|.++|...... ..+..+...+.+..|+|+ ++.|+..+. ++ .|.+||+.++.......+
T Consensus 199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPD----G~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~------------- 260 (448)
T PRK04792 199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPD----GRKLAYVSFENRKAEIFVQDIYTQVREKVTSF------------- 260 (448)
T ss_pred EEEEEeCCCCCc-eEeecCCCcccCceECCC----CCEEEEEEecCCCcEEEEEECCCCCeEEecCC-------------
Confidence 677778765443 455566778899999994 466766543 33 588888877642111100
Q ss_pred CCceEEEEECCCCcEEEE-EeCCCe--EEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-CCc--EEEEE
Q psy9598 618 NAHILCSSFSPGGLFLAT-GSGDHH--VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-DGT--ALIWY 691 (1915)
Q Consensus 618 ~~~V~~l~fspdg~~Las-gs~Dg~--I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-DG~--I~IWD 691 (1915)
.+.....+|+|+|+.|+. .+.+|. |.+||+.+. .+..+..+...+...+|+|+|..|+..+. +|. |.++|
T Consensus 261 ~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg----~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~d 336 (448)
T PRK04792 261 PGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK----ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVN 336 (448)
T ss_pred CCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC----CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 122346799999997765 455665 666676332 13334455556778899999998776553 444 55556
Q ss_pred ccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCCCCeEE
Q psy9598 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHTNEVFV 769 (1915)
Q Consensus 692 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~~~V~s 769 (1915)
+.+++...+.. ........+|+|+|++|+.++..++ .|.++|+.++.... +.... ....
T Consensus 337 l~~g~~~~Lt~-----------------~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~~-~d~~ 397 (448)
T PRK04792 337 LASGKVSRLTF-----------------EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTSTR-LDES 397 (448)
T ss_pred CCCCCEEEEec-----------------CCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCCC-CCCC
Confidence 66665433210 0111234689999999988766344 56667888876533 33221 2234
Q ss_pred EEEccCCCCEEEEEec-Cc--eEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC
Q psy9598 770 LESHPFDSRVLLSAGH-DG--LIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 770 l~~sp~dg~~LaSgs~-DG--~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
..|+| +++.|+..+. +| .|.++++. +.. ...+. .+.+.+...+|+|
T Consensus 398 ps~sp-dG~~I~~~~~~~g~~~l~~~~~~-G~~--~~~l~-----~~~g~~~~p~Wsp 446 (448)
T PRK04792 398 PSVAP-NGTMVIYSTTYQGKQVLAAVSID-GRF--KARLP-----AGQGEVKSPAWSP 446 (448)
T ss_pred ceECC-CCCEEEEEEecCCceEEEEEECC-CCc--eEECc-----CCCCCcCCCccCC
Confidence 57999 7777665544 44 36777774 333 22222 2335567778887
No 370
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.84 E-value=2.7e-06 Score=107.19 Aligned_cols=271 Identities=13% Similarity=0.034 Sum_probs=163.9
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEE
Q psy9598 487 LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 566 (1915)
Q Consensus 487 dg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl 566 (1915)
++..|++++.+|.|..||..+|+.+...... +.+.+.... .+..++.++.++.|..||..+|+.+..+......+...
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~ 181 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLR 181 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeec
Confidence 4678888999999999999999998876533 233221111 24467777889999999999999887765433221110
Q ss_pred E-eccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCce-EEEEECCCCcEEEEEeCCCeEEE
Q psy9598 567 N-FCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI-LCSSFSPGGLFLATGSGDHHVRV 644 (1915)
Q Consensus 567 ~-fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V-~~l~fspdg~~Lasgs~Dg~I~I 644 (1915)
. -+|.. .+..++.++.+|.+..+|+.++..+.......+..... .. ....+ .+..+ .+..+++++.+|.+..
T Consensus 182 ~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~-~~-~~~~~~~~p~~--~~~~vy~~~~~g~l~a 255 (377)
T TIGR03300 182 GSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTE-LE-RLVDVDGDPVV--DGGQVYAVSYQGRVAA 255 (377)
T ss_pred CCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCc-hh-hhhccCCccEE--ECCEEEEEEcCCEEEE
Confidence 0 11111 12467888889999999998886554332221100000 00 00000 01111 2457888888999999
Q ss_pred EEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccE
Q psy9598 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKV 724 (1915)
Q Consensus 645 wDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 724 (1915)
||..+. ..+.... .. ...... ..+..+++++.+|.|..+|..+++.+....... ...+
T Consensus 256 ~d~~tG---~~~W~~~-~~-~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~---------------~~~~ 313 (377)
T TIGR03300 256 LDLRSG---RVLWKRD-AS-SYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELK---------------YRQL 313 (377)
T ss_pred EECCCC---cEEEeec-cC-CccCce--EeCCEEEEECCCCeEEEEECCCCcEEEcccccc---------------CCcc
Confidence 998432 2233222 11 111222 245688888899999999998887432110000 0011
Q ss_pred EEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEE
Q psy9598 725 TMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792 (1915)
Q Consensus 725 ~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IW 792 (1915)
.+... .+..|++++. +|.|++||..+|+.+..+..+...+..--... + ..|+.++.||.|+.|
T Consensus 314 ssp~i--~g~~l~~~~~-~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 314 TAPAV--VGGYLVVGDF-EGYLHWLSREDGSFVARLKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAF 376 (377)
T ss_pred ccCEE--ECCEEEEEeC-CCEEEEEECCCCCEEEEEEcCCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence 11111 3567888877 99999999999999999987765443322222 3 458889999999876
No 371
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.84 E-value=2.3e-06 Score=119.15 Aligned_cols=270 Identities=13% Similarity=0.097 Sum_probs=148.6
Q ss_pred EEEEEcCC-CCEEEEEECCCcEEEEECCCCcEEEEEeC--C------------CCCEEEEEEeCCCCEEEEE-eCCCcEE
Q psy9598 480 FCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRG--C------------SGEISDIAIDNRNILLAAG-TVDKTIR 543 (1915)
Q Consensus 480 ~~vafspd-g~~LaTGs~Dg~I~IWd~~tg~~~~~l~g--H------------~~~I~~Lafspdg~~LaSg-s~DgtIr 543 (1915)
..++++++ |.++++-+..+.|.+||.. |..+..+.+ . -.....|++++++..|+.+ +.++.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 35788874 6677777788899999974 555544432 1 1135789999988765554 4567899
Q ss_pred EEECCCCceEEEeecC-----------------CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccC
Q psy9598 544 IWNLQTLAPISVLVGH-----------------QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606 (1915)
Q Consensus 544 VWDl~tg~~~~~l~~h-----------------~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~ 606 (1915)
++|+.++. +.++.+- -...++|+|+|. ++.++++.+.++.|++||..++...
T Consensus 650 ~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~---~g~LyVad~~~~~I~v~d~~~g~v~------- 718 (1057)
T PLN02919 650 EIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPV---NEKVYIAMAGQHQIWEYNISDGVTR------- 718 (1057)
T ss_pred EEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecC---CCeEEEEECCCCeEEEEECCCCeEE-------
Confidence 99987754 3333221 012245666652 2345555566666666665443210
Q ss_pred ccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCC-EEEEEeCCC
Q psy9598 607 PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-RFVSGSRDG 685 (1915)
Q Consensus 607 ~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~-~L~sgs~DG 685 (1915)
.|..+|.... .+|. . .....-.....|+|+|+|. ++++.+.++
T Consensus 719 ------------------~~~G~G~~~~---~~g~----------~-----~~~~~~~~P~GIavspdG~~LYVADs~n~ 762 (1057)
T PLN02919 719 ------------------VFSGDGYERN---LNGS----------S-----GTSTSFAQPSGISLSPDLKELYIADSESS 762 (1057)
T ss_pred ------------------EEecCCcccc---CCCC----------c-----cccccccCccEEEEeCCCCEEEEEECCCC
Confidence 0000000000 0000 0 0000112244566666665 334444556
Q ss_pred cEEEEEccCCceEEeeeccc---ccC-C-CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEe
Q psy9598 686 TALIWYYKCSQWRFIRLDMN---TCL-P-HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760 (1915)
Q Consensus 686 ~I~IWDl~~~~~~~~~~~~~---~~~-~-~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l 760 (1915)
.|++||+.++.......... ... . +................++++++|..+++-.. ++.|++||..++......
T Consensus 763 ~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~-N~rIrviD~~tg~v~tia 841 (1057)
T PLN02919 763 SIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSY-NHKIKKLDPATKRVTTLA 841 (1057)
T ss_pred eEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECC-CCEEEEEECCCCeEEEEe
Confidence 67777766544221110000 000 0 00000000001122357899999986555555 999999999877655332
Q ss_pred e-------------CCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 761 K-------------GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 761 ~-------------gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
. ++-.....|++++ +++++++-+.+++|++||+.++..
T Consensus 842 G~G~~G~~dG~~~~a~l~~P~GIavd~-dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 842 GTGKAGFKDGKALKAQLSEPAGLALGE-NGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred ccCCcCCCCCcccccccCCceEEEEeC-CCCEEEEECCCCEEEEEECCCCcc
Confidence 1 1112467899999 889999999999999999988765
No 372
>KOG0386|consensus
Probab=98.82 E-value=3.4e-09 Score=134.85 Aligned_cols=99 Identities=24% Similarity=0.419 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHcCCC------CCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhc
Q psy9598 1535 NECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608 (1915)
Q Consensus 1535 ~~~~~ll~~l~~~~~------s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN 1608 (1915)
+.|..|+....++.+ +..|..++++.++||||.||++||++..|+++|..+.|.+..+...|++++|+||+.||
T Consensus 1027 ~~~~~i~~~~~~~~~~~~r~~~~~~~~~~s~k~~~d~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~na~~~~ 1106 (1157)
T KOG0386|consen 1027 KQALKIASTSIKYKDSAGRELSEVFLKLPSRKEYPDYYEIIKKPVAIDKIKKRIENHKYNSLKELEKDFMLLFNNARTYN 1106 (1157)
T ss_pred HHHHHHHHHHHhcccccccccchhcccCcccccccchHHHhcchhhHHHHhhhccccccchHHHHHHHHHhhcchhhhhc
Confidence 679999988886555 78999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1609 QNKRSKIYIMTTRLSEFAEEHLRRLT 1634 (1915)
Q Consensus 1609 ~~~~s~i~~~a~~l~~~f~~~~~~~~ 1634 (1915)
.++ |.+|.+|..|+.+|......+.
T Consensus 1107 ~eg-s~~y~d~~~l~~~~~~~~~~~~ 1131 (1157)
T KOG0386|consen 1107 EEG-SRVYEDAIVLQSVFKSARQEIS 1131 (1157)
T ss_pred cCC-ceechhHHHHHHHHhhhHHHHh
Confidence 988 9999999999999999988876
No 373
>KOG0955|consensus
Probab=98.82 E-value=4.1e-09 Score=139.24 Aligned_cols=109 Identities=27% Similarity=0.358 Sum_probs=100.4
Q ss_pred CchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhc
Q psy9598 114 RPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 193 (1915)
Q Consensus 114 ~~~~~~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN 193 (1915)
...++...++.+|..|.+.+-...|..|||..++|||.++|++||||.||+.++..+.|.++++|.+|+.||..||+.||
T Consensus 562 ~l~p~~kLl~~~l~~lq~kD~~gif~~pvd~~e~pdy~~iik~pmd~~t~~~kl~s~~y~tle~ieed~~l~~~nc~~yn 641 (1051)
T KOG0955|consen 562 GLNPFKKLLQKSLDKLQKKDSYGIFAEPVDPSELPDYIDIIKKPMDFFTMRLKLESGAYSTLEPIEEDVNLIVSNCMEYN 641 (1051)
T ss_pred cCchHHHHHHHHHHHhhcccccCceeeccChhhcccHHHHhcCccchhhhhhhccccchhhhhHHHHhHhHhHhHHHHhh
Confidence 35577888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9598 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVRWN 223 (1915)
Q Consensus 194 ~~~~s~i~~~a~~l~~~f~~~~~~~~~~~~ 223 (1915)
. .++.+|..|.+|++.-.+.+........
T Consensus 642 ~-~dtv~~r~av~~~e~~~~~~~~arke~e 670 (1051)
T KOG0955|consen 642 A-KDTVYYRAAVRLRELIKKDFRNARKEPE 670 (1051)
T ss_pred c-cCeehHhhhHHHHhhhhhHHHhcccchh
Confidence 9 5599999999999998888877655443
No 374
>cd05491 Bromo_TBP7_like Bromodomain; TBP7_like subfamily, limited to fungi. TBP7, or TAT-binding protein homolog 7, is a yeast protein of unknown function that contains AAA-superfamily ATP-ase domains and a bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=98.80 E-value=5.7e-09 Score=103.07 Aligned_cols=40 Identities=38% Similarity=0.674 Sum_probs=38.5
Q ss_pred CcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q psy9598 156 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQN 195 (1915)
Q Consensus 156 ~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN~~ 195 (1915)
.||||+||++||.+|+|.++++|++||+|||.||++||.+
T Consensus 63 y~MDL~tIe~RL~ng~Y~tp~~F~~DiklI~~Nc~~ynd~ 102 (119)
T cd05491 63 YNMDLDTIEERLWNGYYATPKDFLKDIKRIVRDAKTIGDR 102 (119)
T ss_pred eccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCCH
Confidence 5799999999999999999999999999999999999974
No 375
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.79 E-value=2.5e-06 Score=118.93 Aligned_cols=272 Identities=8% Similarity=-0.030 Sum_probs=165.0
Q ss_pred EEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcccccc--ccCCCCCceEEEEECCCCcEEEEE-eCCC
Q psy9598 564 TGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE--RIRPGNAHILCSSFSPGGLFLATG-SGDH 640 (1915)
Q Consensus 564 ~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~--~~~~~~~~V~~l~fspdg~~Lasg-s~Dg 640 (1915)
..+++.+. ++.++++-+.++.|.+||..... +..........+.. .....-.....++++++++.|+++ ..++
T Consensus 571 ~gvavd~~---~g~lyVaDs~n~rI~v~d~~G~~-i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~ 646 (1057)
T PLN02919 571 GKLAIDLL---NNRLFISDSNHNRIVVTDLDGNF-IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENH 646 (1057)
T ss_pred ceEEEECC---CCeEEEEECCCCeEEEEeCCCCE-EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCc
Confidence 45677653 35677888888999999976432 11111100000000 001112346789999988765554 4567
Q ss_pred eEEEEEecCCCCCceeEEeccC-----------------CCCeeEEEEcC-CCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 641 HVRVYKMDGVDSPLGILEVEEH-----------------SDKVDSIQWSH-SHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 641 ~I~IwDl~~~~~~~~i~~l~~h-----------------~~~V~sl~fsp-dg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
.|+++|+.+. .+.++.+- -..-..|+|++ ++..+++.+.++.|++||..++.......
T Consensus 647 ~Ir~id~~~~----~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G 722 (1057)
T PLN02919 647 ALREIDFVNE----TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSG 722 (1057)
T ss_pred eEEEEecCCC----EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEec
Confidence 8999987432 12222110 12335789999 56677788888999999988775432211
Q ss_pred cccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeC-------------C------
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG-------------H------ 763 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~g-------------H------ 763 (1915)
. ...... ...............|+|+++|..|+++...++.|++||+.++.......+ +
T Consensus 723 ~-G~~~~~-~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~ 800 (1057)
T PLN02919 723 D-GYERNL-NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSE 800 (1057)
T ss_pred C-CccccC-CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhh
Confidence 0 000000 000000112234577999999998887777689999999987653221110 0
Q ss_pred --CCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeec--------CCCCcceEEEEEcCCCCEEEEEe
Q psy9598 764 --TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVE--------GQGEGALFDGKWSPDGTTCALTD 833 (1915)
Q Consensus 764 --~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~--------~~~~~~V~~vafSpdg~~Lasg~ 833 (1915)
-....+|++++ ++.++++-+.++.|++||..++.. ......-.. .........++++++|+++++-+
T Consensus 801 ~~l~~P~Gvavd~-dG~LYVADs~N~rIrviD~~tg~v--~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt 877 (1057)
T PLN02919 801 VLLQHPLGVLCAK-DGQIYVADSYNHKIKKLDPATKRV--TTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADT 877 (1057)
T ss_pred hhccCCceeeEeC-CCcEEEEECCCCEEEEEECCCCeE--EEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEEC
Confidence 01235788998 888999999999999999987665 211110000 00112567899999999888888
Q ss_pred CCCeEEEEeCCCCcc
Q psy9598 834 SYGHLLVYGLGGFKR 848 (1915)
Q Consensus 834 ~dG~I~Iwdl~s~~~ 848 (1915)
.++.|++|++.++..
T Consensus 878 ~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 878 NNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCCEEEEEECCCCcc
Confidence 999999999988754
No 376
>KOG0386|consensus
Probab=98.78 E-value=1e-08 Score=130.68 Aligned_cols=100 Identities=24% Similarity=0.409 Sum_probs=93.3
Q ss_pred HHHHHHHHHHhcCCC------CCCCCCCCCCCCCCCccccCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhc
Q psy9598 120 NECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 193 (1915)
Q Consensus 120 ~~~~~il~~l~~~~~------~~~F~~pvd~~~~pdY~~iIk~Pmdl~ti~~kl~~~~Y~~~~~f~~D~~Lif~N~~~yN 193 (1915)
..|..|+....++.+ +..|...++...+||||+||+.||++..|+++|.++.|.+..+...||.++|.||++||
T Consensus 1027 ~~~~~i~~~~~~~~~~~~r~~~~~~~~~~s~k~~~d~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~na~~~~ 1106 (1157)
T KOG0386|consen 1027 KQALKIASTSIKYKDSAGRELSEVFLKLPSRKEYPDYYEIIKKPVAIDKIKKRIENHKYNSLKELEKDFMLLFNNARTYN 1106 (1157)
T ss_pred HHHHHHHHHHHhcccccccccchhcccCcccccccchHHHhcchhhHHHHhhhccccccchHHHHHHHHHhhcchhhhhc
Confidence 678888888886555 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9598 194 QNKRSKIYIMTTRLSEFAEEHLRRLTV 220 (1915)
Q Consensus 194 ~~~~s~i~~~a~~l~~~f~~~~~~~~~ 220 (1915)
.++ |.||..|..|+.+|......+..
T Consensus 1107 ~eg-s~~y~d~~~l~~~~~~~~~~~~~ 1132 (1157)
T KOG0386|consen 1107 EEG-SRVYEDAIVLQSVFKSARQEISK 1132 (1157)
T ss_pred cCC-ceechhHHHHHHHHhhhHHHHhc
Confidence 987 99999999999999999888765
No 377
>KOG0280|consensus
Probab=98.77 E-value=3.9e-07 Score=102.16 Aligned_cols=250 Identities=18% Similarity=0.219 Sum_probs=162.8
Q ss_pred CcEEEEEEcC---CCC-EEEEEECCCcEEEEECCCCcEEEEEeCCCC------CEEEEEEeCCCCEEEEEeCCCcEEEEE
Q psy9598 477 SAVFCVLFDK---LGE-VIVTGADDLLIKLWRARDGKLLATLRGCSG------EISDIAIDNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 477 ~~V~~vafsp---dg~-~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~------~I~~Lafspdg~~LaSgs~DgtIrVWD 546 (1915)
+.++.+.|.. +|. .|+-+-.+|.|.++..........|++-.. ...++.|++.+.-++++-.+|.+.+-+
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~ 149 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY 149 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence 4455555542 344 455666778888887665554445543322 245778899999999999999999666
Q ss_pred CCCCce--EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEE
Q psy9598 547 LQTLAP--ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS 624 (1915)
Q Consensus 547 l~tg~~--~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l 624 (1915)
...... ++.++.|.-.++...|+... .+++++|+.||.+..||++... ...++ ....|...|.|+
T Consensus 150 ~t~~~le~vq~wk~He~E~Wta~f~~~~---pnlvytGgDD~~l~~~D~R~p~---~~i~~-------n~kvH~~GV~SI 216 (339)
T KOG0280|consen 150 ETEMVLEKVQTWKVHEFEAWTAKFSDKE---PNLVYTGGDDGSLSCWDIRIPK---TFIWH-------NSKVHTSGVVSI 216 (339)
T ss_pred cceeeeeecccccccceeeeeeecccCC---CceEEecCCCceEEEEEecCCc---ceeee-------cceeeecceEEE
Confidence 555443 34788999999999998754 4899999999999999998432 22222 122456788888
Q ss_pred EECC-CCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCC--EEEEEeCCCcEEEEEccCCceEEee
Q psy9598 625 SFSP-GGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL--RFVSGSRDGTALIWYYKCSQWRFIR 701 (1915)
Q Consensus 625 ~fsp-dg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~--~L~sgs~DG~I~IWDl~~~~~~~~~ 701 (1915)
.-+| .+.+|++|+.|-.|++||.+....+..-. .-.+.|+.|.++|.-. .|+++-. .-++|-+...+...
T Consensus 217 ~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~---~v~GGVWRi~~~p~~~~~lL~~CMh-~G~ki~~~~~~~~e--- 289 (339)
T KOG0280|consen 217 YSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA---KVGGGVWRIKHHPEIFHRLLAACMH-NGAKILDSSDKVLE--- 289 (339)
T ss_pred ecCCCCCceEEEeccccceeeeehhcccCccccC---ccccceEEEEecchhhhHHHHHHHh-cCceEEEecccccc---
Confidence 8876 57899999999999999997555443322 2347899999998643 3344333 33556555543311
Q ss_pred ecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEE-EEECCCC
Q psy9598 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIK-IWDAFNG 754 (1915)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~-vwD~~tg 754 (1915)
..........|.+-+..-.|.....+|++++..|..++ +|-.-++
T Consensus 290 --------~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 290 --------FQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred --------hheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence 00111223345555556666555667777766677644 6654443
No 378
>cd05491 Bromo_TBP7_like Bromodomain; TBP7_like subfamily, limited to fungi. TBP7, or TAT-binding protein homolog 7, is a yeast protein of unknown function that contains AAA-superfamily ATP-ase domains and a bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=98.73 E-value=1.3e-08 Score=100.51 Aligned_cols=42 Identities=21% Similarity=0.392 Sum_probs=40.0
Q ss_pred CCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhhhhcCCC
Q psy9598 1411 EYPVDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPH 1452 (1915)
Q Consensus 1411 ~~PmdL~tI~~rl~~~~Y~~~~~~~~D~~l~~~Na~~yN~~~ 1452 (1915)
-+||||+||++||.+|+|.+..+|++|++||+.||++||.++
T Consensus 62 ~y~MDL~tIe~RL~ng~Y~tp~~F~~DiklI~~Nc~~ynd~d 103 (119)
T cd05491 62 FYNMDLDTIEERLWNGYYATPKDFLKDIKRIVRDAKTIGDRE 103 (119)
T ss_pred EeccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCCHH
Confidence 369999999999999999999999999999999999999874
No 379
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.1e-05 Score=94.25 Aligned_cols=272 Identities=11% Similarity=0.047 Sum_probs=170.3
Q ss_pred CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC---CeEEEEEecCC-CCCceeEEec
Q psy9598 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD---HHVRVYKMDGV-DSPLGILEVE 660 (1915)
Q Consensus 585 DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D---g~I~IwDl~~~-~~~~~i~~l~ 660 (1915)
+.-|.+|++.+......... .....+.++-++|+|++++|.++..+ |.|..|.++.. .....+....
T Consensus 15 s~gI~v~~ld~~~g~l~~~~---------~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~ 85 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQ---------LVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQT 85 (346)
T ss_pred CCceEEEEEeCcccccchhh---------hccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccc
Confidence 46799999985532211111 11234677889999999998887654 78888888643 2222222222
Q ss_pred cCCCCeeEEEEcCCCCEEEEEe-CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEE
Q psy9598 661 EHSDKVDSIQWSHSHLRFVSGS-RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA 739 (1915)
Q Consensus 661 ~h~~~V~sl~fspdg~~L~sgs-~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~ 739 (1915)
.-..+-..|+++++|++|+++. .-|.|.++-++..-.+.............. ........+.+..++|++++|++.
T Consensus 86 ~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p---~~rQ~~~h~H~a~~tP~~~~l~v~ 162 (346)
T COG2706 86 LPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGP---HERQESPHVHSANFTPDGRYLVVP 162 (346)
T ss_pred cCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCC---CccccCCccceeeeCCCCCEEEEe
Confidence 2223337899999999888776 458899998865321111100000000000 011223447889999999999998
Q ss_pred EecCCeEEEEECCCCceEEEee---CCCCCeEEEEEccCCCCEEEEEec-CceEEEEECCCC--ccccceeeeeeec-CC
Q psy9598 740 INFNFQIKIWDAFNGDLVQVLK---GHTNEVFVLESHPFDSRVLLSAGH-DGLIIIWDILSS--KQRGYKWFHNIVE-GQ 812 (1915)
Q Consensus 740 s~~Dg~I~vwD~~tg~~i~~l~---gH~~~V~sl~~sp~dg~~LaSgs~-DG~I~IWdl~s~--~~~~~~~~~~~~~-~~ 812 (1915)
.-.--.|.+|++..|.+...-. .....-..|.||| +++++...+. +++|.+|..... +...++.+..+-. ..
T Consensus 163 DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHp-n~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~ 241 (346)
T COG2706 163 DLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHP-NGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFT 241 (346)
T ss_pred ecCCceEEEEEcccCccccccccccCCCCCcceEEEcC-CCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccC
Confidence 7656689999999776543222 2334567899999 8888877665 899999999873 3222333222111 23
Q ss_pred CCcceEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCcc-c---------ccCCCceeecCCCCeeeecC
Q psy9598 813 GEGALFDGKWSPDGTTCALTDS-YGHLLVYGLGGFKR-P---------QNIPRELFFHTDYRTLNRPN 869 (1915)
Q Consensus 813 ~~~~V~~vafSpdg~~Lasg~~-dG~I~Iwdl~s~~~-~---------~~l~~~~~F~~d~~~Lv~~~ 869 (1915)
+.....++.+++||++|.++.. ...|.+|.+..... + ...|....|.++++.|+...
T Consensus 242 g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~ 309 (346)
T COG2706 242 GTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAAN 309 (346)
T ss_pred CCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEc
Confidence 3456778899999999998853 23677887763211 1 23466778899999998554
No 380
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.72 E-value=4e-06 Score=106.19 Aligned_cols=305 Identities=9% Similarity=-0.006 Sum_probs=179.0
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCC----------CEE-EEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSG----------EIS-DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL 556 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~----------~I~-~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l 556 (1915)
+..|++++.+|.|.-+|..+|+.+........ .+. .+.. ++..|+.++.++.|..+|..+|+.+...
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~ 146 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT 146 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence 66888888899999999999998887643220 010 1111 3456777888999999999999988776
Q ss_pred ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEE
Q psy9598 557 VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 636 (1915)
Q Consensus 557 ~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasg 636 (1915)
.... .+.+ +|.- .+..++.++.+|.|..+|..++..+.......+... ......++. .+..++.+
T Consensus 147 ~~~~-~~~s---sP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~---~~~~~sP~v------~~~~v~~~ 211 (394)
T PRK11138 147 KVAG-EALS---RPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLT---LRGESAPAT------AFGGAIVG 211 (394)
T ss_pred cCCC-ceec---CCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCccc---ccCCCCCEE------ECCEEEEE
Confidence 5432 2211 1211 125677788899999999999987665544311100 000111111 12346667
Q ss_pred eCCCeEEEEEecCCCCCceeEEeccCC--C---CeeEEEEcC--CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCC
Q psy9598 637 SGDHHVRVYKMDGVDSPLGILEVEEHS--D---KVDSIQWSH--SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 709 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~~~~i~~l~~h~--~---~V~sl~fsp--dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~ 709 (1915)
+.+|.+..+|..+....-.. .+.... . ....+..+| .+..+++++.+|.+..+|+.+++.+... ...
T Consensus 212 ~~~g~v~a~d~~~G~~~W~~-~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~-~~~---- 285 (394)
T PRK11138 212 GDNGRVSAVLMEQGQLIWQQ-RISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKR-EYG---- 285 (394)
T ss_pred cCCCEEEEEEccCChhhhee-ccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEee-cCC----
Confidence 77888888887432211110 000000 0 000111111 2456777888999999999988744321 000
Q ss_pred CCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCC-CeEEEEEccCCCCEEEEEecCce
Q psy9598 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN-EVFVLESHPFDSRVLLSAGHDGL 788 (1915)
Q Consensus 710 ~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~-~V~sl~~sp~dg~~LaSgs~DG~ 788 (1915)
. ...+. ..+..|++++. +|.|..+|..+|+.+.....-.. ...+..+ .+..|+.++.||.
T Consensus 286 ----------~---~~~~~--~~~~~vy~~~~-~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v---~~g~l~v~~~~G~ 346 (394)
T PRK11138 286 ----------S---VNDFA--VDGGRIYLVDQ-NDRVYALDTRGGVELWSQSDLLHRLLTAPVL---YNGYLVVGDSEGY 346 (394)
T ss_pred ----------C---ccCcE--EECCEEEEEcC-CCeEEEEECCCCcEEEcccccCCCcccCCEE---ECCEEEEEeCCCE
Confidence 0 00111 23566777776 89999999999987664432111 1222222 2467788999999
Q ss_pred EEEEECCCCccccceeeeeeecCCCCcceEE-EEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 789 IIIWDILSSKQRGYKWFHNIVEGQGEGALFD-GKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 789 I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~-vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
|.+.|..+|+. +.... + ....+.+ ..+ .+..|++++.+|.|+.+.+
T Consensus 347 l~~ld~~tG~~--~~~~~--~---~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 347 LHWINREDGRF--VAQQK--V---DSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EEEEECCCCCE--EEEEE--c---CCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 99999999987 44433 1 1111221 111 3557888999999988864
No 381
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.69 E-value=4.1e-07 Score=101.81 Aligned_cols=259 Identities=19% Similarity=0.254 Sum_probs=170.2
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCC--ceeEEeccCC------------CCeeEEEEcCCCC--EEEEEe
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP--LGILEVEEHS------------DKVDSIQWSHSHL--RFVSGS 682 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~--~~i~~l~~h~------------~~V~sl~fspdg~--~L~sgs 682 (1915)
..|+++.|...|.+|++|...|.|.+|.-...... ..+..+++|. ..|..|.|..++. .|+..+
T Consensus 27 d~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlst 106 (460)
T COG5170 27 DKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLST 106 (460)
T ss_pred ceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEec
Confidence 56899999999999999999999999986433211 1223355554 3577888876543 678888
Q ss_pred CCCcEEEEEccCCceEEeee---------ccccc-----------CCC-------CccccccccccccEEEEEECCCCCE
Q psy9598 683 RDGTALIWYYKCSQWRFIRL---------DMNTC-----------LPH-------TKETSDETNKKIKVTMVAWDASDRW 735 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~~---------~~~~~-----------~~~-------~~~~~~~~~~~~~V~~va~spdg~~ 735 (1915)
.|.+|++|.+.......+.. .+... +.. .+.......|...|++++|..|..+
T Consensus 107 NdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et 186 (460)
T COG5170 107 NDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKET 186 (460)
T ss_pred CCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchhe
Confidence 99999999887553221110 00000 000 0000112457778999999999999
Q ss_pred EEEEEecCCeEEEEECCCCc---eEEEeeCCC-----CCeEEEEEccCCCCEEEEEecCceEEEEECCCCccc--cceee
Q psy9598 736 VITAINFNFQIKIWDAFNGD---LVQVLKGHT-----NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR--GYKWF 805 (1915)
Q Consensus 736 L~t~s~~Dg~I~vwD~~tg~---~i~~l~gH~-----~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~--~~~~~ 805 (1915)
++++. |-.|.+|++.-.. -+.-++.|. ..|++..|||....++.-.+..|.|++-|++....- ....+
T Consensus 187 ~lSaD--dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf 264 (460)
T COG5170 187 LLSAD--DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF 264 (460)
T ss_pred eeecc--ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence 88775 6889999986422 233344554 358889999987888888899999999999743220 01112
Q ss_pred eeeecCC-------CCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-cccccCCC---------------------ce
Q psy9598 806 HNIVEGQ-------GEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGF-KRPQNIPR---------------------EL 856 (1915)
Q Consensus 806 ~~~~~~~-------~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~-~~~~~l~~---------------------~~ 856 (1915)
...+.+. -...|.++.|+++|++|++-+. -+|.|||+... .++.++|. ++
T Consensus 265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFei 343 (460)
T COG5170 265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEI 343 (460)
T ss_pred hhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEE
Confidence 2112221 1247889999999999998887 58999999865 46677754 45
Q ss_pred eecCCCCeeeecC-CCccceeeccc
Q psy9598 857 FFHTDYRTLNRPN-GLFEPTYDEVT 880 (1915)
Q Consensus 857 ~F~~d~~~Lv~~~-~~~~~v~D~~t 880 (1915)
.|+.|...+..++ .+.+++|-+.+
T Consensus 344 sfSgd~~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 344 SFSGDDKHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred EecCCcccccccccccceeeecccc
Confidence 6777776666443 33355664333
No 382
>KOG0309|consensus
Probab=98.68 E-value=7.9e-08 Score=117.71 Aligned_cols=213 Identities=21% Similarity=0.370 Sum_probs=147.9
Q ss_pred eEEecCCCCcEEEEEEcCC-CCEEEEEECCCcEEEEECCCC-cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Q psy9598 469 HYVNLGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDG-KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspd-g~~LaTGs~Dg~I~IWd~~tg-~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWD 546 (1915)
-..|.||..+|+.+-|.|. -..|+|++.|..|..||+.+- ..+..+..-...-..++|+.-...+.+.+....|+|||
T Consensus 107 ef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd 186 (1081)
T KOG0309|consen 107 EFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWD 186 (1081)
T ss_pred EEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEe
Confidence 3567899999999999985 467899999999999999876 35555554455667899987555555556678899999
Q ss_pred CCCC-ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEE
Q psy9598 547 LQTL-APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625 (1915)
Q Consensus 547 l~tg-~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 625 (1915)
+..| .++..+++|...|+++.|.... ...+.+++.||+|++||............. ....|.-..
T Consensus 187 ~r~gs~pl~s~K~~vs~vn~~~fnr~~---~s~~~s~~~d~tvkfw~y~kSt~e~~~~vt-----------t~~piw~~r 252 (1081)
T KOG0309|consen 187 LRKGSTPLCSLKGHVSSVNSIDFNRFK---YSEIMSSSNDGTVKFWDYSKSTTESKRTVT-----------TNFPIWRGR 252 (1081)
T ss_pred ccCCCcceEEecccceeeehHHHhhhh---hhhhcccCCCCceeeecccccccccceecc-----------ccCcceecc
Confidence 9865 5788999999999999998753 367899999999999998765432222111 123334344
Q ss_pred ECCCCc--EEEEEeCCCeEEEEEecC-------CCCCceeEEeccCCCCeeEEEEcCCCC----------EEEEEeCCCc
Q psy9598 626 FSPGGL--FLATGSGDHHVRVYKMDG-------VDSPLGILEVEEHSDKVDSIQWSHSHL----------RFVSGSRDGT 686 (1915)
Q Consensus 626 fspdg~--~Lasgs~Dg~I~IwDl~~-------~~~~~~i~~l~~h~~~V~sl~fspdg~----------~L~sgs~DG~ 686 (1915)
+.|-|. ++.---.+..|.+++.+. ......++.+.||.+.|..+.|-..+. .|++-|.|.+
T Consensus 253 ~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~ 332 (1081)
T KOG0309|consen 253 YLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQT 332 (1081)
T ss_pred ccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCc
Confidence 444222 111111111333333321 124567889999999998887754332 6999999999
Q ss_pred EEEEEccCC
Q psy9598 687 ALIWYYKCS 695 (1915)
Q Consensus 687 I~IWDl~~~ 695 (1915)
+++|-+...
T Consensus 333 lrlWpI~~~ 341 (1081)
T KOG0309|consen 333 LRLWPIDSQ 341 (1081)
T ss_pred eEeeeccHH
Confidence 999977643
No 383
>KOG4714|consensus
Probab=98.65 E-value=2.6e-07 Score=101.71 Aligned_cols=211 Identities=15% Similarity=0.113 Sum_probs=122.4
Q ss_pred eEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeE
Q psy9598 563 ITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642 (1915)
Q Consensus 563 V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I 642 (1915)
|+.+.|.. ...|+++..++.+..+....+.+.....-.........+..+...-.+-..+--++-+++|+.||.+
T Consensus 39 ~~~~~~v~-----~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~ 113 (319)
T KOG4714|consen 39 LSKVSLSA-----EYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSL 113 (319)
T ss_pred EEEeechh-----hheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceE
Confidence 44445543 3567777777766665544332221111110000000111122222233334456679999999999
Q ss_pred EEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-----CCcEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 643 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-----DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 643 ~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-----DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
.+++.+.. ......+......-.+.++...++.+.++.. -+..++|+++..... .+ ..
T Consensus 114 ~v~s~~~~--~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~---------~~------~~ 176 (319)
T KOG4714|consen 114 AVFSTDKD--LALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTL---------IP------SK 176 (319)
T ss_pred EEEechHH--HhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccc---------cc------cc
Confidence 99998531 1111111111222223334445555554432 123445544432211 01 01
Q ss_pred ccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCce-EEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL-VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~-i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
.....|.+++-+|..+.+++++..||.+-+||.++... +..+..|..+|+.|-|||.++..|++++.||.+..||..+
T Consensus 177 -~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 177 -KALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred -cccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 11223899999999888887777799999999988743 4456799999999999999999999999999999999875
No 384
>KOG0882|consensus
Probab=98.65 E-value=7.4e-07 Score=104.66 Aligned_cols=300 Identities=14% Similarity=0.139 Sum_probs=197.8
Q ss_pred CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC--C-cEEEEEeCCCCCEEEEEEeCCCCEEEEEeC-CCcEEEEECCC
Q psy9598 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD--G-KLLATLRGCSGEISDIAIDNRNILLAAGTV-DKTIRIWNLQT 549 (1915)
Q Consensus 474 gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~t--g-~~~~~l~gH~~~I~~Lafspdg~~LaSgs~-DgtIrVWDl~t 549 (1915)
-|.+.|+.|..+- ..++++++.||.++.|.-.. | +.+..+..|.+.|.+|+.+.++.++.|++. |..++++|+.+
T Consensus 7 mhrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn 85 (558)
T KOG0882|consen 7 MHRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN 85 (558)
T ss_pred cccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence 4778888876654 56999999999999998543 2 455667889999999999999999999887 99999999987
Q ss_pred CceEEEee--cCCCCeEEEEeccCccCCC--cEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEE
Q psy9598 550 LAPISVLV--GHQGIITGVNFCPLEVNGF--NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625 (1915)
Q Consensus 550 g~~~~~l~--~h~~~V~sl~fsp~~~~d~--~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 625 (1915)
...+.-+. .-.+.+. +..++ ++. .+.++.-.+|.|.++|-....+.... ...-|..+|.++.
T Consensus 86 ~DminmiKL~~lPg~a~-wv~sk---Gd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~----------fkklH~sPV~~i~ 151 (558)
T KOG0882|consen 86 FDMINMIKLVDLPGFAE-WVTSK---GDKISLIAVSLFKSGKIFVVDGFGDFCQDGY----------FKKLHFSPVKKIR 151 (558)
T ss_pred cchhhhcccccCCCceE-EecCC---CCeeeeEEeecccCCCcEEECCcCCcCccce----------ecccccCceEEEE
Confidence 55443222 1122221 12222 111 22333346788999987655432111 1124668999999
Q ss_pred ECCCCcEEEEEeCCCeEEEEEecCC-CCC-----------ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 626 FSPGGLFLATGSGDHHVRVYKMDGV-DSP-----------LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 626 fspdg~~Lasgs~Dg~I~IwDl~~~-~~~-----------~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
+++.+..++++...|.|.-|..... ..+ .-+..+........++.|+|+|..+.+-+.|..|+++++.
T Consensus 152 y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~K 231 (558)
T KOG0882|consen 152 YNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFK 231 (558)
T ss_pred eeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEec
Confidence 9999999999999999999998531 000 0111222345667899999999999999999999999999
Q ss_pred CCceEEeeecccc---cCC---CCccc----------cc-cccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCce
Q psy9598 694 CSQWRFIRLDMNT---CLP---HTKET----------SD-ETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL 756 (1915)
Q Consensus 694 ~~~~~~~~~~~~~---~~~---~~~~~----------~~-~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~ 756 (1915)
++..+...-...+ ..+ ..... .. .......-+.++|+..|.+|+.++- --|+|.++.++.+
T Consensus 232 tGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~--~gikvin~~tn~v 309 (558)
T KOG0882|consen 232 TGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTI--LGIKVINLDTNTV 309 (558)
T ss_pred cchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecc--eeEEEEEeecCeE
Confidence 9876443211110 000 00000 00 1112234467889999999998875 4589999999888
Q ss_pred EEEeeCCCCCe--------------------------EEEEEccCCCCEEEEEecCceEEEE
Q psy9598 757 VQVLKGHTNEV--------------------------FVLESHPFDSRVLLSAGHDGLIIIW 792 (1915)
Q Consensus 757 i~~l~gH~~~V--------------------------~sl~~sp~dg~~LaSgs~DG~I~IW 792 (1915)
++.+--.. .| -.+.+.+ |..+++++-....+++|
T Consensus 310 ~ri~gk~e-~ir~~~~sl~q~~~k~~~~~~~~~a~~np~~~~~~-dpt~~c~a~kk~rfylf 369 (558)
T KOG0882|consen 310 VRILGKDE-AIRFTRLSLYQGAQKSNLAALEVAASNNPLLEFQK-DPTIVCTAFKKNRFYLF 369 (558)
T ss_pred EEEeccch-hhhhhhHHHHhhhhhccchhhhhhhccCcccccCC-CCeEEEeeeecceEEEE
Confidence 77652111 11 0122334 66777777777888888
No 385
>KOG1645|consensus
Probab=98.63 E-value=1.9e-06 Score=100.47 Aligned_cols=271 Identities=13% Similarity=0.067 Sum_probs=162.9
Q ss_pred EEEEECCCCcEEEEEeCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcE
Q psy9598 500 IKLWRARDGKLLATLRGCSGEISDIAIDNRNI-LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNY 578 (1915)
Q Consensus 500 I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~-~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~ 578 (1915)
|++.+..+.+....+.+|...|.+|+|||.+. +|..++.+..|.|.|+.+..++..+..| ..+++++|.-+ +.++
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDld---e~h~ 250 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLD---ERHV 250 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccC---Ccce
Confidence 78888777777777889999999999999877 7888999999999999999999888888 88999999874 4689
Q ss_pred EEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEE------EECCCCcEEEEEeCCCeEEEEEecCCC-
Q psy9598 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS------SFSPGGLFLATGSGDHHVRVYKMDGVD- 651 (1915)
Q Consensus 579 L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l------~fspdg~~Lasgs~Dg~I~IwDl~~~~- 651 (1915)
|+.|-.+|.|.|||++............. ...+|..+ ...+.|.+|+..+.+ +..|.+....
T Consensus 251 IYaGl~nG~VlvyD~R~~~~~~~e~~a~~---------t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~ 319 (463)
T KOG1645|consen 251 IYAGLQNGMVLVYDMRQPEGPLMELVANV---------TINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAE 319 (463)
T ss_pred eEEeccCceEEEEEccCCCchHhhhhhhh---------ccCcceeecccCccccccccceEEeeehh--hhhhhhhcccc
Confidence 99999999999999987654221111100 00122222 233345556555543 5567764322
Q ss_pred CCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC-------cEEE-EEccCCceEEeeecccccCCCCcccccccccccc
Q psy9598 652 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG-------TALI-WYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723 (1915)
Q Consensus 652 ~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG-------~I~I-WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1915)
...++..+ +..+.+.++++++..++++...... .|-+ -|...+..+........ +. ....-..
T Consensus 320 ~~p~vlel-e~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~---Gs-----~~~kl~t 390 (463)
T KOG1645|consen 320 CLPCVLEL-EPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYF---GS-----KQTKLST 390 (463)
T ss_pred CCCccccc-CCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeeccccc---CC-----ccccccc
Confidence 22222222 2345566666666555444433220 0000 01111111100000000 00 0000000
Q ss_pred EEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 724 V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
-..+.-.++.++|+..+...+.+.+||..+++.++++.-. .+|..++....++.-++..-.|..++||...
T Consensus 391 ~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~-epv~Dicp~~~n~~syLa~LTd~~v~Iyk~e 461 (463)
T KOG1645|consen 391 TQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLALS-EPVLDICPNDTNGSSYLALLTDDRVHIYKNE 461 (463)
T ss_pred ccceeccccccEEEEecCCcceeEEeccchhheeeecccC-cceeecceeecCCcchhhheecceEEEEecC
Confidence 1112223555777766655788999999999999998754 6788887665444434444456688887654
No 386
>KOG0955|consensus
Probab=98.61 E-value=4e-08 Score=130.09 Aligned_cols=105 Identities=27% Similarity=0.381 Sum_probs=96.7
Q ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCccccccCccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcC
Q psy9598 1530 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609 (1915)
Q Consensus 1530 ~~~~~~~~~~ll~~l~~~~~s~~F~~pv~~~~~pdY~~iIk~Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~ 1609 (1915)
...+++.++.+|..|...+....|..|||..++|||.++|++||||.||+.++..+.|.++++|..|+.||..||+.||.
T Consensus 563 l~p~~kLl~~~l~~lq~kD~~gif~~pvd~~e~pdy~~iik~pmd~~t~~~kl~s~~y~tle~ieed~~l~~~nc~~yn~ 642 (1051)
T KOG0955|consen 563 LNPFKKLLQKSLDKLQKKDSYGIFAEPVDPSELPDYIDIIKKPMDFFTMRLKLESGAYSTLEPIEEDVNLIVSNCMEYNA 642 (1051)
T ss_pred CchHHHHHHHHHHHhhcccccCceeeccChhhcccHHHHhcCccchhhhhhhccccchhhhhHHHHhHhHhHhHHHHhhc
Confidence 34566778899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9598 1610 NKRSKIYIMTTRLSEFAEEHLRRLTV 1635 (1915)
Q Consensus 1610 ~~~s~i~~~a~~l~~~f~~~~~~~~~ 1635 (1915)
-+ ..+|..|..|++.....+.....
T Consensus 643 ~d-tv~~r~av~~~e~~~~~~~~ark 667 (1051)
T KOG0955|consen 643 KD-TVYYRAAVRLRELIKKDFRNARK 667 (1051)
T ss_pred cC-eehHhhhHHHHhhhhhHHHhccc
Confidence 66 99999999999988777766543
No 387
>KOG1832|consensus
Probab=98.57 E-value=5.3e-08 Score=120.73 Aligned_cols=224 Identities=16% Similarity=0.154 Sum_probs=152.0
Q ss_pred cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEe-CCC-
Q psy9598 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS-TDG- 586 (1915)
Q Consensus 509 ~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs-~Dg- 586 (1915)
+...+|+.|+...+|++|+.+.++|+.|+..|.|+++++.+|.......+|...|+-|.-+-+ +.++++.+ ...
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~d----gs~~Ltsss~S~P 1167 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVD----GSTQLTSSSSSSP 1167 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCC----cceeeeeccccCc
Confidence 445677889999999999999999999999999999999999999999999999999887764 34444443 333
Q ss_pred eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeE-EeccCCCC
Q psy9598 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGIL-EVEEHSDK 665 (1915)
Q Consensus 587 tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~-~l~~h~~~ 665 (1915)
-..+|++..-. ...+.| ..-.|+.|+....+-+.|+.-..+.|||+.+........ ...+....
T Consensus 1168 lsaLW~~~s~~-------~~~Hsf--------~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~ 1232 (1516)
T KOG1832|consen 1168 LSALWDASSTG-------GPRHSF--------DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYS 1232 (1516)
T ss_pred hHHHhcccccc-------Cccccc--------cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhh
Confidence 56789876421 111111 234578888776666666666788999996543222211 11122223
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe
Q psy9598 666 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745 (1915)
Q Consensus 666 V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~ 745 (1915)
-++..|+|+..+++- || .+||++..+.++.+-.+. .-..-.|+|.|.-+++-+.
T Consensus 1233 ~n~a~FsP~D~LIln---dG--vLWDvR~~~aIh~FD~ft-----------------~~~~G~FHP~g~eVIINSE---- 1286 (1516)
T KOG1832|consen 1233 NNLAHFSPCDTLILN---DG--VLWDVRIPEAIHRFDQFT-----------------DYGGGGFHPSGNEVIINSE---- 1286 (1516)
T ss_pred ccccccCCCcceEee---Cc--eeeeeccHHHHhhhhhhe-----------------ecccccccCCCceEEeech----
Confidence 367789999887663 44 389998765333221111 1122358999999988765
Q ss_pred EEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEE
Q psy9598 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 746 I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaS 782 (1915)
|||++|.++++....-. -..|.|+. .|.++..
T Consensus 1287 --IwD~RTF~lLh~VP~Ld--qc~VtFNs-tG~VmYa 1318 (1516)
T KOG1832|consen 1287 --IWDMRTFKLLHSVPSLD--QCAVTFNS-TGDVMYA 1318 (1516)
T ss_pred --hhhhHHHHHHhcCcccc--ceEEEecc-Cccchhh
Confidence 89999999888765433 35667777 6665543
No 388
>KOG3914|consensus
Probab=98.57 E-value=7.3e-07 Score=104.41 Aligned_cols=164 Identities=16% Similarity=0.149 Sum_probs=112.9
Q ss_pred eEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEe---CCCcEEEEEccCCce
Q psy9598 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS---RDGTALIWYYKCSQW 697 (1915)
Q Consensus 621 V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs---~DG~I~IWDl~~~~~ 697 (1915)
+..+.+++.+.+||++..+....++++..............-...-+++.|..+......+. ....+.+|....+.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~- 143 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR- 143 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC-
Confidence 34556788899999998888888888754433222222222222333444444444444433 33344444333222
Q ss_pred EEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-CCCCCeEEEEEccCC
Q psy9598 698 RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-GHTNEVFVLESHPFD 776 (1915)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-gH~~~V~sl~~sp~d 776 (1915)
.....+|-..++.|+|+||+++|+++.. |..|+|-.+.....+..|. ||..-|..++.-+
T Consensus 144 ----------------~~~~lGhvSml~dVavS~D~~~IitaDR-DEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-- 204 (390)
T KOG3914|consen 144 ----------------CEPILGHVSMLLDVAVSPDDQFIITADR-DEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-- 204 (390)
T ss_pred ----------------cchhhhhhhhhheeeecCCCCEEEEecC-CceEEEEecCcccchhhhccccHhheeeeeecc--
Confidence 1234568889999999999999999998 9999998877666666654 8999999999976
Q ss_pred CCEEEEEecCceEEEEECCCCccccceeee
Q psy9598 777 SRVLLSAGHDGLIIIWDILSSKQRGYKWFH 806 (1915)
Q Consensus 777 g~~LaSgs~DG~I~IWdl~s~~~~~~~~~~ 806 (1915)
+..|++||.|++|++||+.+|+. +.++.
T Consensus 205 ~~~LlS~sGD~tlr~Wd~~sgk~--L~t~d 232 (390)
T KOG3914|consen 205 NYLLLSGSGDKTLRLWDITSGKL--LDTCD 232 (390)
T ss_pred CceeeecCCCCcEEEEecccCCc--ccccc
Confidence 56699999999999999999998 55443
No 389
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.50 E-value=4.5e-05 Score=90.30 Aligned_cols=146 Identities=16% Similarity=0.208 Sum_probs=115.7
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEECCC-cEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Q psy9598 473 LGHLSAVFCVLFDKLGEVIVTGADDL-LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 551 (1915)
Q Consensus 473 ~gH~~~V~~vafspdg~~LaTGs~Dg-~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~ 551 (1915)
.||.+.|.-..+.-++.-++.|..|| .|-|+|..+++. ..+...-+.|.++..+++|++++.+.....|.+.|+.+|.
T Consensus 356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 48999999999998888999999999 899999977754 4455667889999999999999999988999999999998
Q ss_pred eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC----eEEEEecccCccccceeccCccccccccCCCCCceEEEEEC
Q psy9598 552 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG----CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 627 (1915)
Q Consensus 552 ~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg----tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs 627 (1915)
....-+...+-|+.+.|+|++ .+|+.+--+| .|+++|+.+++...... + .+.=.+-+|.
T Consensus 435 v~~idkS~~~lItdf~~~~ns----r~iAYafP~gy~tq~Iklydm~~~Kiy~vTT---~----------ta~DfsPaFD 497 (668)
T COG4946 435 VRLIDKSEYGLITDFDWHPNS----RWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT---P----------TAYDFSPAFD 497 (668)
T ss_pred eeEecccccceeEEEEEcCCc----eeEEEecCcceeeeeEEEEecCCCeEEEecC---C----------cccccCcccC
Confidence 877667778899999999954 8999887666 68999998875321111 1 1223455778
Q ss_pred CCCcEEEEE
Q psy9598 628 PGGLFLATG 636 (1915)
Q Consensus 628 pdg~~Lasg 636 (1915)
|+|++|..-
T Consensus 498 ~d~ryLYfL 506 (668)
T COG4946 498 PDGRYLYFL 506 (668)
T ss_pred CCCcEEEEE
Confidence 888776544
No 390
>KOG4532|consensus
Probab=98.44 E-value=2.2e-05 Score=87.18 Aligned_cols=242 Identities=9% Similarity=0.050 Sum_probs=156.0
Q ss_pred CCEEEEEECCCcEEEEECCCCcE-EEEEeCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEE
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKL-LATLRGCSGEISDIAIDN-RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITG 565 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~-~~~l~gH~~~I~~Lafsp-dg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~s 565 (1915)
-.+||.||.-|...+|...+... +.....|...|+-+.=.- ...-+..++.|.++++.++..+.....+....-.+++
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns 163 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNS 163 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceee
Confidence 46899999999999999986643 333344444333221111 1224666788999999988765544333222234789
Q ss_pred EEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEE
Q psy9598 566 VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645 (1915)
Q Consensus 566 l~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~Iw 645 (1915)
+++++ ++.++++.+....|.+|.+.......... ...+....-.|.+|+.....+|++..||++.||
T Consensus 164 ~~~sn----d~~~~~~Vgds~~Vf~y~id~~sey~~~~---------~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~ 230 (344)
T KOG4532|consen 164 LHYSN----DPSWGSSVGDSRRVFRYAIDDESEYIENI---------YEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIY 230 (344)
T ss_pred eEEcC----CCceEEEecCCCcceEEEeCCccceeeee---------EecccCCCceeeeeccCcceEEEEecCCcEEEE
Confidence 99998 45899999999999999887653211111 111223445788999999999999999999999
Q ss_pred EecCCCCCceeE--EeccCCCCeeEEEEcCCCC--EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccccc
Q psy9598 646 KMDGVDSPLGIL--EVEEHSDKVDSIQWSHSHL--RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721 (1915)
Q Consensus 646 Dl~~~~~~~~i~--~l~~h~~~V~sl~fspdg~--~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1915)
|++....+.... +-..|.+.|..+.|++.|. +|+..-.-+.+.+.|+++..-.......... ......
T Consensus 231 DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~--------~~~~~t 302 (344)
T KOG4532|consen 231 DVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDV--------ERKHNT 302 (344)
T ss_pred EecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccc--------cccccc
Confidence 997655443322 2356899999999998664 4555556678999999987644333211111 111122
Q ss_pred ccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 722 ~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
..|...+|+.++.-+.++.. -.+.=|++.
T Consensus 303 q~ifgt~f~~~n~s~~v~~e--~~~ae~ni~ 331 (344)
T KOG4532|consen 303 QHIFGTNFNNENESNDVKNE--LQGAEYNIL 331 (344)
T ss_pred cccccccccCCCcccccccc--hhhheeecc
Confidence 34777778777766666553 234445543
No 391
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.43 E-value=0.00021 Score=90.71 Aligned_cols=269 Identities=12% Similarity=0.037 Sum_probs=159.8
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEE-EEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEE-
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISD-IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITG- 565 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~-Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~s- 565 (1915)
+..|+.++.+|.|..+|..+|+.+....... .+.+ ..+. +..|+.++.++.|..+|..+|+.+..+......+..
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~ssP~v~--~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~ 196 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAG-EALSRPVVS--DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLR 196 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCC-ceecCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeecCCCCccccc
Confidence 5677888899999999999999988776433 2222 1222 346667788999999999999998877543211100
Q ss_pred EEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECC--CCcEEEEEeCCCeEE
Q psy9598 566 VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP--GGLFLATGSGDHHVR 643 (1915)
Q Consensus 566 l~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp--dg~~Lasgs~Dg~I~ 643 (1915)
..-+|.- ....++.++.+|.+..+|..++..........+...... .....+..+| .+..|++++.+|.+.
T Consensus 197 ~~~sP~v--~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~-----~~~~~~~~sP~v~~~~vy~~~~~g~l~ 269 (394)
T PRK11138 197 GESAPAT--AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEI-----DRLVDVDTTPVVVGGVVYALAYNGNLV 269 (394)
T ss_pred CCCCCEE--ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccch-----hcccccCCCcEEECCEEEEEEcCCeEE
Confidence 0112221 124577788899999999998876554433211100000 0000111112 244677777889999
Q ss_pred EEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccccccccc
Q psy9598 644 VYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723 (1915)
Q Consensus 644 IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1915)
.+|+.+. ..+.... ......+.. .+..|+.++.+|.+..+|..+++.+....... ...
T Consensus 270 ald~~tG---~~~W~~~--~~~~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~---------------~~~ 327 (394)
T PRK11138 270 ALDLRSG---QIVWKRE--YGSVNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQSDLL---------------HRL 327 (394)
T ss_pred EEECCCC---CEEEeec--CCCccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEcccccC---------------CCc
Confidence 8888432 2222211 111112222 45678888899999999998886432110000 000
Q ss_pred EEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEE-EEEccCCCCEEEEEecCceEEEEEC
Q psy9598 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFV-LESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 724 V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~s-l~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
..+..+ .+.+|+++.. +|.|.++|..+|+.+.....+...+.+ ..+ .+..|+.++.||.|+.+++
T Consensus 328 ~~sp~v--~~g~l~v~~~-~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~---~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 328 LTAPVL--YNGYLVVGDS-EGYLHWINREDGRFVAQQKVDSSGFLSEPVV---ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred ccCCEE--ECCEEEEEeC-CCEEEEEECCCCCEEEEEEcCCCcceeCCEE---ECCEEEEEeCCceEEEEeC
Confidence 111111 2566777777 999999999999998887654333332 222 2346888899999988764
No 392
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.42 E-value=0.00023 Score=84.00 Aligned_cols=220 Identities=13% Similarity=0.020 Sum_probs=139.7
Q ss_pred EEEEcC-CCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEe-CCCCEEEEEeCCCcEEEEECCCCceEEEeec
Q psy9598 481 CVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPISVLVG 558 (1915)
Q Consensus 481 ~vafsp-dg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafs-pdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~ 558 (1915)
+++|.+ +|.++++-...+.|..|+..++.... +.... ...+++. +++.+++ +... .+.++|+.++.....+..
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v-~~~~-~~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYV-ADSG-GIAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEE-EETT-CEEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEE-EEcC-ceEEEecCCCcEEEEeec
Confidence 678997 77777887788999999998876543 22222 7778888 6655544 4444 456669998865444332
Q ss_pred -----CCCCeEEEEeccCccCCCcEEEEEeCC--------CeEEEEecccCccccceeccCccccccccCCCCCceEEEE
Q psy9598 559 -----HQGIITGVNFCPLEVNGFNYLASTSTD--------GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625 (1915)
Q Consensus 559 -----h~~~V~sl~fsp~~~~d~~~L~sgs~D--------gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 625 (1915)
.....+.+++.+. +++.++.... |.|..++.. +.. ..... .-...+.++
T Consensus 79 ~~~~~~~~~~ND~~vd~~----G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~--~~~~~-----------~~~~pNGi~ 140 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPD----GNLYVTDSGGGGASGIDPGSVYRIDPD-GKV--TVVAD-----------GLGFPNGIA 140 (246)
T ss_dssp ETTCSCTEEEEEEEE-TT----S-EEEEEECCBCTTCGGSEEEEEEETT-SEE--EEEEE-----------EESSEEEEE
T ss_pred cCCCcccCCCceEEEcCC----CCEEEEecCCCccccccccceEEECCC-CeE--EEEec-----------CcccccceE
Confidence 3456789999984 4666665543 446556555 221 11111 114468999
Q ss_pred ECCCCcEEE-EEeCCCeEEEEEecCCCC-C---ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEe
Q psy9598 626 FSPGGLFLA-TGSGDHHVRVYKMDGVDS-P---LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFI 700 (1915)
Q Consensus 626 fspdg~~La-sgs~Dg~I~IwDl~~~~~-~---~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~ 700 (1915)
|+|+++.|+ +-+..+.|..|++..... . ..+..+....+....+++..+|++.++....+.|.+++.. ++....
T Consensus 141 ~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~ 219 (246)
T PF08450_consen 141 FSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLRE 219 (246)
T ss_dssp EETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEE
T ss_pred ECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEE
Confidence 999998765 566788899999854332 1 1222233333458899999999988888889999999987 543322
Q ss_pred eecccccCCCCccccccccccccEEEEEE-CCCCCEEEEEE
Q psy9598 701 RLDMNTCLPHTKETSDETNKKIKVTMVAW-DASDRWVITAI 740 (1915)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~V~~va~-spdg~~L~t~s 740 (1915)
.. .....+++++| .++...|++++
T Consensus 220 i~----------------~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 220 IE----------------LPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EE-----------------SSSSEEEEEEESTTSSEEEEEE
T ss_pred Ec----------------CCCCCEEEEEEECCCCCEEEEEe
Confidence 11 01236788999 46767776654
No 393
>KOG3914|consensus
Probab=98.40 E-value=3.7e-06 Score=98.67 Aligned_cols=158 Identities=17% Similarity=0.189 Sum_probs=99.5
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCCce----EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc
Q psy9598 522 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAP----ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI 597 (1915)
Q Consensus 522 ~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~----~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~ 597 (1915)
..+..++.+++||.+..+....++++..... +.... -...-+++.|..... .......++....+.+|....+.
T Consensus 66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~-sv~v~dkagD~~~~di~s~~~~~ 143 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDT-SVLVADKAGDVYSFDILSADSGR 143 (390)
T ss_pred cccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccc-eEEEEeecCCceeeeeecccccC
Confidence 3345567778888887777776777654332 11111 112223333433210 01112222333444444433221
Q ss_pred cccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEE-eccCCCCeeEEEEcCCCC
Q psy9598 598 DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILE-VEEHSDKVDSIQWSHSHL 676 (1915)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~-l~~h~~~V~sl~fspdg~ 676 (1915)
.....+|-..++.++|+||+.+|+++..|..|+|-..... ..+.. .-||...|..++.-++ .
T Consensus 144 -------------~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~---f~IesfclGH~eFVS~isl~~~-~ 206 (390)
T KOG3914|consen 144 -------------CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPAT---FVIESFCLGHKEFVSTISLTDN-Y 206 (390)
T ss_pred -------------cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcc---cchhhhccccHhheeeeeeccC-c
Confidence 2233467788999999999999999999999999877322 22222 3579999999998755 4
Q ss_pred EEEEEeCCCcEEEEEccCCceE
Q psy9598 677 RFVSGSRDGTALIWYYKCSQWR 698 (1915)
Q Consensus 677 ~L~sgs~DG~I~IWDl~~~~~~ 698 (1915)
.|++||.|++|++||+.++...
T Consensus 207 ~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 207 LLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred eeeecCCCCcEEEEecccCCcc
Confidence 5999999999999999999865
No 394
>KOG0882|consensus
Probab=98.39 E-value=3.7e-06 Score=98.99 Aligned_cols=261 Identities=15% Similarity=0.085 Sum_probs=168.9
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC--C-ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC-CCeEEEEe
Q psy9598 517 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--L-APISVLVGHQGIITGVNFCPLEVNGFNYLASTST-DGCIGFWK 592 (1915)
Q Consensus 517 H~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~t--g-~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~-DgtI~iWD 592 (1915)
|...|+.+..+. ..++.+++.||.++.|--.. | ..+..+..|.+.|.+++.+- ++.++.|++. |..++++|
T Consensus 8 hrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~----dg~L~~Sv~d~Dhs~KvfD 82 (558)
T KOG0882|consen 8 HRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSY----DGWLFRSVEDPDHSVKVFD 82 (558)
T ss_pred ccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccc----cceeEeeccCcccceeEEE
Confidence 777787776554 45999999999999997643 1 23445667888898888886 4578888777 99999999
Q ss_pred cccCccccceeccCccccccccCCCCCceEEEEECCCC--cEEEEE-eCCCeEEEEEecCCCCCceeEEeccCCCCeeEE
Q psy9598 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG--LFLATG-SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSI 669 (1915)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg--~~Lasg-s~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl 669 (1915)
+..-..+.-+..... + +.+ ++..++.. ..|+++ -.+|.|.|+|-.+. .......-.-|..+|.++
T Consensus 83 vEn~DminmiKL~~l--------P--g~a-~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d-~~q~~~fkklH~sPV~~i 150 (558)
T KOG0882|consen 83 VENFDMINMIKLVDL--------P--GFA-EWVTSKGDKISLIAVSLFKSGKIFVVDGFGD-FCQDGYFKKLHFSPVKKI 150 (558)
T ss_pred eeccchhhhcccccC--------C--Cce-EEecCCCCeeeeEEeecccCCCcEEECCcCC-cCccceecccccCceEEE
Confidence 876543322222111 1 112 12222221 133333 35788999997433 333344456699999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccC-CceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEE
Q psy9598 670 QWSHSHLRFVSGSRDGTALIWYYKC-SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKI 748 (1915)
Q Consensus 670 ~fspdg~~L~sgs~DG~I~IWDl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~v 748 (1915)
.+.+.+..+++....|.|..|.... .+... ........................++.|+|+|..+.+-+. |..|++
T Consensus 151 ~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr--~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~-DrkVR~ 227 (558)
T KOG0882|consen 151 RYNQAGDSAVSIDISGMVEYWSAEGPFQFPR--TNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP-DRKVRG 227 (558)
T ss_pred EeeccccceeeccccceeEeecCCCcccCcc--ccccccccccchhhcccccccCccceEEccccCcccccCc-ccEEEE
Confidence 9999999999999999999998763 11100 0011111111122233345567789999999999998887 999999
Q ss_pred EECCCCceEEEeeC--------------------------------CCC-CeEEEEEccCCCCEEEEEecCceEEEEECC
Q psy9598 749 WDAFNGDLVQVLKG--------------------------------HTN-EVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795 (1915)
Q Consensus 749 wD~~tg~~i~~l~g--------------------------------H~~-~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~ 795 (1915)
+++.+|++++.+.. |.. .-+.++|.. .+++|+-|+-=| |+|.++.
T Consensus 228 F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fde-s~~flly~t~~g-ikvin~~ 305 (558)
T KOG0882|consen 228 FVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDE-SGNFLLYGTILG-IKVINLD 305 (558)
T ss_pred EEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcC-CCCEEEeeccee-EEEEEee
Confidence 99999987665431 111 113344555 667777666543 6677777
Q ss_pred CCcc
Q psy9598 796 SSKQ 799 (1915)
Q Consensus 796 s~~~ 799 (1915)
++.+
T Consensus 306 tn~v 309 (558)
T KOG0882|consen 306 TNTV 309 (558)
T ss_pred cCeE
Confidence 6665
No 395
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.37 E-value=0.00011 Score=83.64 Aligned_cols=247 Identities=13% Similarity=0.125 Sum_probs=140.1
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCC--cEEEEEeCC---CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEE
Q psy9598 481 CVLFDKLGEVIVTGADDLLIKLWRARDG--KLLATLRGC---SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555 (1915)
Q Consensus 481 ~vafspdg~~LaTGs~Dg~I~IWd~~tg--~~~~~l~gH---~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~ 555 (1915)
.++.+.+|++||.- .|..|-|=...+. ..+.....+ .-.=.-|+||||+.+||.+...|+|+|+|+.. ..+..
T Consensus 2 ~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~ 79 (282)
T PF15492_consen 2 HLALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFV 79 (282)
T ss_pred ceeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEE
Confidence 36778899888876 5667777766543 233333322 22346799999999999999999999999975 34444
Q ss_pred eec-------CCCCeEEEEeccCccCC--CcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEE
Q psy9598 556 LVG-------HQGIITGVNFCPLEVNG--FNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626 (1915)
Q Consensus 556 l~~-------h~~~V~sl~fsp~~~~d--~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f 626 (1915)
+.. -...|.++.|.+..... ...|++-...|.++-|-+..+.... +...+.+ .........|.++.+
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~---y~e~hsf-sf~~~yp~Gi~~~vy 155 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQG---YQENHSF-SFSSHYPHGINSAVY 155 (282)
T ss_pred cCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCc---ceeeEEE-EecccCCCceeEEEE
Confidence 432 22567778887643111 1256667777888777654321100 0000000 001122467999999
Q ss_pred CCCCcEEEEEeCCCeE-EEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCE--EEEEeCCCc------EEEEEccCCce
Q psy9598 627 SPGGLFLATGSGDHHV-RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR--FVSGSRDGT------ALIWYYKCSQW 697 (1915)
Q Consensus 627 spdg~~Lasgs~Dg~I-~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~--L~sgs~DG~------I~IWDl~~~~~ 697 (1915)
+|..++|++||....= ..+ .+....+++-.+-.+..+ .++...|+. ..+|.+-+..
T Consensus 156 ~p~h~LLlVgG~~~~~~~~s--------------~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~- 220 (282)
T PF15492_consen 156 HPKHRLLLVGGCEQNQDGMS--------------KASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFK- 220 (282)
T ss_pred cCCCCEEEEeccCCCCCccc--------------cccccCceEEEEcCCCCcEEEccccCccccccccccceeecccee-
Confidence 9998888887653210 000 011111121111111110 112222211 1122211110
Q ss_pred EEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCC
Q psy9598 698 RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~ 764 (1915)
...........|..+.+||||..|++... +|.|.+|++.+..+...+..+.
T Consensus 221 ---------------~fs~~~~~~d~i~kmSlSPdg~~La~ih~-sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 221 ---------------FFSRQGQEQDGIFKMSLSPDGSLLACIHF-SGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred ---------------eeeccccCCCceEEEEECCCCCEEEEEEc-CCeEEEEecCcchhhcccchhh
Confidence 00111234677999999999999999998 9999999999887777765443
No 396
>KOG1275|consensus
Probab=98.36 E-value=6.6e-06 Score=104.14 Aligned_cols=184 Identities=15% Similarity=0.180 Sum_probs=141.4
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEE
Q psy9598 487 LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 566 (1915)
Q Consensus 487 dg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl 566 (1915)
++..++.|+....+..+|+.+++......-..+.|+-|. .++++|++|...|+|.+-|..+.+.++++..|++.|.++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf 223 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF 223 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence 355677777777899999999988887765565666665 457899999999999999999999999999999999988
Q ss_pred EeccCccCCCcEEEEEeC---------CCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEEEEE
Q psy9598 567 NFCPLEVNGFNYLASTST---------DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFLATG 636 (1915)
Q Consensus 567 ~fsp~~~~d~~~L~sgs~---------DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~Lasg 636 (1915)
... |++|++||. |.-|++||++....+..+.+.... .-+.|.|. ...++++
T Consensus 224 Dv~------GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-------------~flrf~Psl~t~~~V~ 284 (1118)
T KOG1275|consen 224 DVQ------GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-------------QFLRFHPSLTTRLAVT 284 (1118)
T ss_pred ecc------CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-------------hhhhhcccccceEEEE
Confidence 775 478888874 456899999988766655554221 22445553 3467788
Q ss_pred eCCCeEEEEEecCCCCC-ceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q psy9598 637 SGDHHVRVYKMDGVDSP-LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 691 (1915)
Q Consensus 637 s~Dg~I~IwDl~~~~~~-~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWD 691 (1915)
+..|...+-|..+...+ ..+..+......+.+++++++|..++.|..+|.|.+|.
T Consensus 285 S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 285 SQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 88899999884332332 34444555566699999999999999999999999996
No 397
>KOG1920|consensus
Probab=98.33 E-value=0.00026 Score=93.23 Aligned_cols=205 Identities=16% Similarity=0.168 Sum_probs=140.2
Q ss_pred CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC----CC---
Q psy9598 477 SAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNL----QT--- 549 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl----~t--- 549 (1915)
+.|.++.|..++.-|+.+..+|.|.+-|..+..... .....+.|.+++||||+.+|+..+..++|.+-.- -.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 689999999999999999999999999988765432 2234678999999999999999988888776432 10
Q ss_pred ----------------CceEEEeecCCC---------------------CeEEEEeccCccCCCcEEEEE-----eCCCe
Q psy9598 550 ----------------LAPISVLVGHQG---------------------IITGVNFCPLEVNGFNYLAST-----STDGC 587 (1915)
Q Consensus 550 ----------------g~~~~~l~~h~~---------------------~V~sl~fsp~~~~d~~~L~sg-----s~Dgt 587 (1915)
|+.-..|.|..+ .=++|.|-- +|.++++. ..-..
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRg----Dg~~fAVs~~~~~~~~Rk 223 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRG----DGEYFAVSFVESETGTRK 223 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEcc----CCcEEEEEEEeccCCcee
Confidence 111112222111 123477764 66888873 22378
Q ss_pred EEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEe---CCCeEEEEEecCCCCCceeEEeccCCC
Q psy9598 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS---GDHHVRVYKMDGVDSPLGILEVEEHSD 664 (1915)
Q Consensus 588 I~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs---~Dg~I~IwDl~~~~~~~~i~~l~~h~~ 664 (1915)
|+|||-. +.. ... .. +..+.-.+++|-|.|.++++-. .|+.|.+|.-++.........+.....
T Consensus 224 irV~drE-g~L-ns~--se---------~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~ 290 (1265)
T KOG1920|consen 224 IRVYDRE-GAL-NST--SE---------PVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEK 290 (1265)
T ss_pred EEEeccc-chh-hcc--cC---------cccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCccccc
Confidence 9999976 321 111 01 1123346899999999988753 456799998766555544444444455
Q ss_pred CeeEEEEcCCCCEEEE---EeCCCcEEEEEccCCceEE
Q psy9598 665 KVDSIQWSHSHLRFVS---GSRDGTALIWYYKCSQWRF 699 (1915)
Q Consensus 665 ~V~sl~fspdg~~L~s---gs~DG~I~IWDl~~~~~~~ 699 (1915)
.|..++|+.++..|++ +.....|++|-+.+..|-.
T Consensus 291 ~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYL 328 (1265)
T KOG1920|consen 291 EVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYL 328 (1265)
T ss_pred chheeeecCCCCceeeeecccccceEEEEEecCeEEEE
Confidence 5999999999998887 4555559999888877654
No 398
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.30 E-value=0.00026 Score=80.77 Aligned_cols=205 Identities=14% Similarity=0.161 Sum_probs=116.5
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEec-------cCCCCeeEEEEcCCC------CEEEEEeCCC
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE-------EHSDKVDSIQWSHSH------LRFVSGSRDG 685 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~-------~h~~~V~sl~fspdg------~~L~sgs~DG 685 (1915)
-+-.-++||||+.+||.+...|+|++||+.+.. ++.+. .....|.++.|.... ..|++-...|
T Consensus 44 PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~----lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G 119 (282)
T PF15492_consen 44 PQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE----LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRG 119 (282)
T ss_pred chheEEEECCCCcEEEEEcCCCeEEEEecccce----eEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccc
Confidence 445789999999999999999999999995321 22221 123456677775432 2466666777
Q ss_pred cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCC
Q psy9598 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN 765 (1915)
Q Consensus 686 ~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~ 765 (1915)
.++-|-+..+..... ...............|++++++|..+.|++||.....-..+ .+...
T Consensus 120 ~L~Sy~vs~gt~q~y--------~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s-----------~a~~~ 180 (282)
T PF15492_consen 120 QLRSYLVSVGTNQGY--------QENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMS-----------KASSC 180 (282)
T ss_pred eeeeEEEEcccCCcc--------eeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccc-----------ccccc
Confidence 777775532210000 00000111222467899999999999999887633211010 01111
Q ss_pred CeEEEEEccCCCCEE-EEEecCce------EEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeE
Q psy9598 766 EVFVLESHPFDSRVL-LSAGHDGL------IIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHL 838 (1915)
Q Consensus 766 ~V~sl~~sp~dg~~L-aSgs~DG~------I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I 838 (1915)
.+++-.+-.....+. ++...|+. ..+|.+-+... +. ..++....|..|..||||.+||+...+|.|
T Consensus 181 GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~-----fs--~~~~~~d~i~kmSlSPdg~~La~ih~sG~l 253 (282)
T PF15492_consen 181 GLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKF-----FS--RQGQEQDGIFKMSLSPDGSLLACIHFSGSL 253 (282)
T ss_pred CceEEEEcCCCCcEEEccccCccccccccccceeeccceee-----ee--ccccCCCceEEEEECCCCCEEEEEEcCCeE
Confidence 222222211111222 12222221 23343322111 11 123345789999999999999999999999
Q ss_pred EEEeCCCCcccccCC
Q psy9598 839 LVYGLGGFKRPQNIP 853 (1915)
Q Consensus 839 ~Iwdl~s~~~~~~l~ 853 (1915)
.||++.+-.......
T Consensus 254 sLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 254 SLWEIPSLRLQRSWK 268 (282)
T ss_pred EEEecCcchhhcccc
Confidence 999999876554443
No 399
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.30 E-value=0.00021 Score=90.65 Aligned_cols=211 Identities=10% Similarity=-0.050 Sum_probs=121.3
Q ss_pred cEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCE-EEEEeC---CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccC
Q psy9598 499 LIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL-LAAGTV---DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574 (1915)
Q Consensus 499 ~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~-LaSgs~---DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~ 574 (1915)
.|.+=|..... ...+... +.+....|+|||+. ++..+. +..|.++|+.+++...... ..+.+....|+|++
T Consensus 170 ~l~~~d~dg~~-~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG-- 244 (419)
T PRK04043 170 NIVLADYTLTY-QKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDG-- 244 (419)
T ss_pred eEEEECCCCCc-eeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCC--
Confidence 45555553333 3333323 37788999999984 554443 3569999999887655443 55566778899953
Q ss_pred CCcEEEEEeCC--CeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CC--eEEEEEecC
Q psy9598 575 GFNYLASTSTD--GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DH--HVRVYKMDG 649 (1915)
Q Consensus 575 d~~~L~sgs~D--gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg--~I~IwDl~~ 649 (1915)
..++++.+.+ ..|.++|+.++... .+. .+........|+|||+.|+..+. .| .|.++|+.+
T Consensus 245 -~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT------------~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~ 310 (419)
T PRK04043 245 -SKLLLTMAPKGQPDIYLYDTNTKTLT-QIT------------NYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS 310 (419)
T ss_pred -CEEEEEEccCCCcEEEEEECCCCcEE-Ecc------------cCCCccCccEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 2444555544 45666677665321 111 11122234579999987776653 33 566666643
Q ss_pred CCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC---------CcEEEEEccCCceEEeeecccccCCCCccccccccc
Q psy9598 650 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD---------GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK 720 (1915)
Q Consensus 650 ~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D---------G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (1915)
... ..+ ...+. ....|+|+|..|+..+.. ..|.+.|+.++....+.. .
T Consensus 311 g~~-~rl-t~~g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~-----------------~ 367 (419)
T PRK04043 311 GSV-EQV-VFHGK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTA-----------------N 367 (419)
T ss_pred CCe-EeC-ccCCC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCC-----------------C
Confidence 221 122 11121 124899999988766644 256777777665432110 0
Q ss_pred cccEEEEEECCCCCEEEEEEecCC--eEEEEECC
Q psy9598 721 KIKVTMVAWDASDRWVITAINFNF--QIKIWDAF 752 (1915)
Q Consensus 721 ~~~V~~va~spdg~~L~t~s~~Dg--~I~vwD~~ 752 (1915)
.......|+|||+.|+.+....+ .|.++++.
T Consensus 368 -~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 368 -GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN 400 (419)
T ss_pred -CCcCCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence 11224789999999887765233 35566653
No 400
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.29 E-value=0.00019 Score=84.13 Aligned_cols=224 Identities=13% Similarity=0.012 Sum_probs=137.1
Q ss_pred CCCcEEEEECCCCcEEEEEeCC--CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCcc
Q psy9598 496 DDLLIKLWRARDGKLLATLRGC--SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEV 573 (1915)
Q Consensus 496 ~Dg~I~IWd~~tg~~~~~l~gH--~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~ 573 (1915)
.+|+|..||..+|+.+....-- .....+. ...++..|++++.++.|..||..+|+.+..+.. .+.+......
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~---- 74 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPVV---- 74 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEE----
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceeee----
Confidence 3689999999999999887531 1222222 233556777778999999999999999887765 2222111111
Q ss_pred CCCcEEEEEeCCCeEEEEecccCccccce-eccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCC
Q psy9598 574 NGFNYLASTSTDGCIGFWKYKLDIDISKT-VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652 (1915)
Q Consensus 574 ~d~~~L~sgs~DgtI~iWDl~~~~~~~~~-~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~ 652 (1915)
.+..+++++.++.|..+|..++..+... ....+.. .....+.....+..++++..++.|..+|+.+
T Consensus 75 -~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t--- 141 (238)
T PF13360_consen 75 -DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA---------GVRSSSSPAVDGDRLYVGTSSGKLVALDPKT--- 141 (238)
T ss_dssp -ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTC---------STB--SEEEEETTEEEEEETCSEEEEEETTT---
T ss_pred -cccccccccceeeeEecccCCcceeeeecccccccc---------ccccccCceEecCEEEEEeccCcEEEEecCC---
Confidence 2356777778889999999999876553 2221100 0111222222377888888899999999843
Q ss_pred CceeEEeccCCCC----------eeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccc
Q psy9598 653 PLGILEVEEHSDK----------VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKI 722 (1915)
Q Consensus 653 ~~~i~~l~~h~~~----------V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1915)
...+.....+... +.+-.+..++ .++.++.+|.+..+|+.+++... .....
T Consensus 142 G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w-~~~~~----------------- 202 (238)
T PF13360_consen 142 GKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLW-SKPIS----------------- 202 (238)
T ss_dssp TEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEE-EECSS-----------------
T ss_pred CcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEE-EecCC-----------------
Confidence 3334433332211 1222233345 77777777854444999887332 11100
Q ss_pred cEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEE
Q psy9598 723 KVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQV 759 (1915)
Q Consensus 723 ~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~ 759 (1915)
.+.. .....+..|++++. ++.|.+||+.+|+.+..
T Consensus 203 ~~~~-~~~~~~~~l~~~~~-~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 203 GIYS-LPSVDGGTLYVTSS-DGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp -ECE-CEECCCTEEEEEET-TTEEEEEETTTTEEEEE
T ss_pred CccC-CceeeCCEEEEEeC-CCEEEEEECCCCCEEeE
Confidence 1111 13467788888885 99999999999987653
No 401
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.26 E-value=0.00054 Score=80.90 Aligned_cols=230 Identities=13% Similarity=-0.001 Sum_probs=140.5
Q ss_pred EEEEeC-CCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccc
Q psy9598 523 DIAIDN-RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601 (1915)
Q Consensus 523 ~Lafsp-dg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~ 601 (1915)
+++|.+ ++.++++....+.|..|+..++.... +.... ..++++... + ..|+.+...+ +.++|+.++.....
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~---~-g~l~v~~~~~-~~~~d~~~g~~~~~ 75 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRP---D-GRLYVADSGG-IAVVDPDTGKVTVL 75 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECT---T-SEEEEEETTC-EEEEETTTTEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEcc---C-CEEEEEEcCc-eEEEecCCCcEEEE
Confidence 578888 77777777788999999998876543 22222 677777731 2 4555555555 45558877643222
Q ss_pred eeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC--------CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC
Q psy9598 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD--------HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 673 (1915)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D--------g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp 673 (1915)
..... -.......+.+++.++|++.++.... |.|..++.. . .+..+...-...+.|+|+|
T Consensus 76 ~~~~~-------~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~--~---~~~~~~~~~~~pNGi~~s~ 143 (246)
T PF08450_consen 76 ADLPD-------GGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD--G---KVTVVADGLGFPNGIAFSP 143 (246)
T ss_dssp EEEET-------TCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT--S---EEEEEEEEESSEEEEEEET
T ss_pred eeccC-------CCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC--C---eEEEEecCcccccceEECC
Confidence 11100 00123668899999999977776543 445555542 1 1222333345678999999
Q ss_pred CCCEEE-EEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 674 SHLRFV-SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 674 dg~~L~-sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
+++.|+ +-+..+.|..|++........... ............-.++++.+|+..++... .+.|.+++..
T Consensus 144 dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~g~pDG~~vD~~G~l~va~~~-~~~I~~~~p~ 213 (246)
T PF08450_consen 144 DGKTLYVADSFNGRIWRFDLDADGGELSNRR---------VFIDFPGGPGYPDGLAVDSDGNLWVADWG-GGRIVVFDPD 213 (246)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTCCEEEEE---------EEEE-SSSSCEEEEEEEBTTS-EEEEEET-TTEEEEEETT
T ss_pred cchheeecccccceeEEEeccccccceeeee---------eEEEcCCCCcCCCcceEcCCCCEEEEEcC-CCEEEEECCC
Confidence 998765 566778888888864332000000 00001111134677999999987766555 8999999987
Q ss_pred CCceEEEeeCCCCCeEEEEEccCCCC-EEEEE
Q psy9598 753 NGDLVQVLKGHTNEVFVLESHPFDSR-VLLSA 783 (1915)
Q Consensus 753 tg~~i~~l~gH~~~V~sl~~sp~dg~-~LaSg 783 (1915)
|+++..+......+++++|...+.. +++|.
T Consensus 214 -G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 214 -GKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp -SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred -ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 9999888866668999999532444 44443
No 402
>KOG4714|consensus
Probab=98.23 E-value=9.6e-06 Score=89.74 Aligned_cols=169 Identities=12% Similarity=0.113 Sum_probs=109.3
Q ss_pred eeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCc-EEEEEeCCCCCEEEEEEeCCCCEEEEEeC-----C
Q psy9598 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK-LLATLRGCSGEISDIAIDNRNILLAAGTV-----D 539 (1915)
Q Consensus 466 ~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~-~~~~l~gH~~~I~~Lafspdg~~LaSgs~-----D 539 (1915)
....+.+.-|.++-.|-+.+-.++.+++|..||.+.+++...-. ....+..-...-.+.+....+++|.++.. -
T Consensus 79 i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~ 158 (319)
T KOG4714|consen 79 IDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQ 158 (319)
T ss_pred cCceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeec
Confidence 33344555676666666667678899999999999999976521 11111111111222333345556655532 1
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCC
Q psy9598 540 KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNA 619 (1915)
Q Consensus 540 gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1915)
+..++|+++....+..-.-....|++++-+|.. .+.+++|+.||.+.+||++..... ...+..|..
T Consensus 159 d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~q---q~~v~cgt~dg~~~l~d~rn~~~p-----------~S~l~ahk~ 224 (319)
T KOG4714|consen 159 DNFYANTLDPIKTLIPSKKALDAVTALCSHPAQ---QHLVCCGTDDGIVGLWDARNVAMP-----------VSLLKAHKA 224 (319)
T ss_pred cceeeecccccccccccccccccchhhhCCccc---ccEEEEecCCCeEEEEEcccccch-----------HHHHHHhhh
Confidence 345566665322221111122348999999854 588999999999999999876321 123346778
Q ss_pred ceEEEEECC-CCcEEEEEeCCCeEEEEEec
Q psy9598 620 HILCSSFSP-GGLFLATGSGDHHVRVYKMD 648 (1915)
Q Consensus 620 ~V~~l~fsp-dg~~Lasgs~Dg~I~IwDl~ 648 (1915)
.|.-+-|+| ++..|++++.||.+..||..
T Consensus 225 ~i~eV~FHpk~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 225 EIWEVHFHPKNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred hhhheeccCCCchheeEecCCCcEEEEcCC
Confidence 999999999 57789999999999999974
No 403
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.22 E-value=0.00042 Score=81.51 Aligned_cols=250 Identities=13% Similarity=0.068 Sum_probs=145.2
Q ss_pred EEEEcC-CCCEEEEEECCC-cEEEEECCCCcEEEEEeCCCCCEE--EEEEeCCCCEEEEEe-----CCCcEEEEECC-CC
Q psy9598 481 CVLFDK-LGEVIVTGADDL-LIKLWRARDGKLLATLRGCSGEIS--DIAIDNRNILLAAGT-----VDKTIRIWNLQ-TL 550 (1915)
Q Consensus 481 ~vafsp-dg~~LaTGs~Dg-~I~IWd~~tg~~~~~l~gH~~~I~--~Lafspdg~~LaSgs-----~DgtIrVWDl~-tg 550 (1915)
.++.+| .+..+|.+-.-| ...+||..++.....+....+.-. .-+||+||++|++.= ..|.|-|||.. +.
T Consensus 9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~ 88 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGY 88 (305)
T ss_pred ceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCc
Confidence 677888 556666776665 467899999998877653332221 358999999999863 35899999998 67
Q ss_pred ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCC
Q psy9598 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 630 (1915)
Q Consensus 551 ~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg 630 (1915)
..+..+..|.-.-..|.+.|+ +..|+++-. | |.- ...++.. ++... .. +.
T Consensus 89 ~ri~E~~s~GIGPHel~l~pD----G~tLvVANG-G-I~T-hpd~GR~--kLNl~-------------------tM--~p 138 (305)
T PF07433_consen 89 RRIGEFPSHGIGPHELLLMPD----GETLVVANG-G-IET-HPDSGRA--KLNLD-------------------TM--QP 138 (305)
T ss_pred EEEeEecCCCcChhhEEEcCC----CCEEEEEcC-C-Ccc-CcccCce--ecChh-------------------hc--CC
Confidence 778888887777778888884 456666532 1 110 0001100 00000 00 01
Q ss_pred cEEEEEeCCCe-EEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCc-------EEEEEccCCceEEeee
Q psy9598 631 LFLATGSGDHH-VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT-------ALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 631 ~~Lasgs~Dg~-I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~-------I~IWDl~~~~~~~~~~ 702 (1915)
++.+.-..+|. +--|.+.. .-|...|..|++..+|..++.+-..|- |-+|+. +....
T Consensus 139 sL~~ld~~sG~ll~q~~Lp~----------~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~--- 203 (305)
T PF07433_consen 139 SLVYLDARSGALLEQVELPP----------DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALR--- 203 (305)
T ss_pred ceEEEecCCCceeeeeecCc----------cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcce---
Confidence 12222122332 23333310 124556667777777654444332221 112211 11000
Q ss_pred cccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEE
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaS 782 (1915)
...............|-+|+++.++.++++++-..+.+.+||..++.++....-.. +..|+..+ ++ +++|
T Consensus 204 ------~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~D--~cGva~~~-~~-f~~s 273 (305)
T PF07433_consen 204 ------LLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLPD--ACGVAPTD-DG-FLVS 273 (305)
T ss_pred ------eccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccCc--eeeeeecC-Cc-eEEe
Confidence 00000111234567899999999999998888878999999999999988765443 56676665 44 6665
Q ss_pred Eec
Q psy9598 783 AGH 785 (1915)
Q Consensus 783 gs~ 785 (1915)
.|.
T Consensus 274 sG~ 276 (305)
T PF07433_consen 274 SGQ 276 (305)
T ss_pred CCC
Confidence 554
No 404
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.21 E-value=0.00093 Score=86.92 Aligned_cols=287 Identities=13% Similarity=0.067 Sum_probs=161.5
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCC------CEE--EEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecC
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSG------EIS--DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 559 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~------~I~--~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h 559 (1915)
+..|+.++.++.|...|..+|+.+..+..... .+. .+++. ++..++.++.++.|..+|..+|+.+..+...
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 55677788899999999999998887754322 111 11111 2257778888999999999999998877543
Q ss_pred CCC--eEEEEeccCccCCCcEEEEEe---------CCCeEEEEecccCccccceeccCccccccccC--------CCCCc
Q psy9598 560 QGI--ITGVNFCPLEVNGFNYLASTS---------TDGCIGFWKYKLDIDISKTVFHEPVMFNERIR--------PGNAH 620 (1915)
Q Consensus 560 ~~~--V~sl~fsp~~~~d~~~L~sgs---------~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 620 (1915)
... -..+.-+|.- ....++.++ .+|.|..+|..+++.+.......+........ .....
T Consensus 140 ~~~~~~~~i~ssP~v--~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 217 (488)
T cd00216 140 DQVPPGYTMTGAPTI--VKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT 217 (488)
T ss_pred CCcCcceEecCCCEE--ECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence 221 0112222321 114455554 36889999999998766655431111000000 00011
Q ss_pred e-EEEEECCCCcEEEEEeCCC------------------eEEEEEecCCCCCceeEEec--cCCC----CeeEEEEc---
Q psy9598 621 I-LCSSFSPGGLFLATGSGDH------------------HVRVYKMDGVDSPLGILEVE--EHSD----KVDSIQWS--- 672 (1915)
Q Consensus 621 V-~~l~fspdg~~Lasgs~Dg------------------~I~IwDl~~~~~~~~i~~l~--~h~~----~V~sl~fs--- 672 (1915)
+ ...++.+.+..+++++.++ .|.-+|+.+. ...-... .|.. ......+.
T Consensus 218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG---~~~W~~~~~~~~~~~~~~~s~p~~~~~~ 294 (488)
T cd00216 218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTG---KVKWFYQTTPHDLWDYDGPNQPSLADIK 294 (488)
T ss_pred ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCC---CEEEEeeCCCCCCcccccCCCCeEEecc
Confidence 1 1345555566788887665 5777776332 2222221 1211 00000111
Q ss_pred -CCCC---EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEE---------
Q psy9598 673 -HSHL---RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA--------- 739 (1915)
Q Consensus 673 -pdg~---~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~--------- 739 (1915)
-+|. .+++++.+|.+...|..+++.+...... ...++.++ ..++++
T Consensus 295 ~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~-------------------~~~~~~~~--~~vyv~~~~~~~~~~ 353 (488)
T cd00216 295 PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV-------------------EQPMAYDP--GLVYLGAFHIPLGLP 353 (488)
T ss_pred ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee-------------------ccccccCC--ceEEEccccccccCc
Confidence 2333 5788889999999999999855432110 00011111 111111
Q ss_pred --------EecCCeEEEEECCCCceEEEeeCCC--------CCe--EEEEEccCCCCEEEEEecCceEEEEECCCCcccc
Q psy9598 740 --------INFNFQIKIWDAFNGDLVQVLKGHT--------NEV--FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRG 801 (1915)
Q Consensus 740 --------s~~Dg~I~vwD~~tg~~i~~l~gH~--------~~V--~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~ 801 (1915)
...+|.|...|+.+|+.+-...... .+. ..+.. .+.+|++++.||.|+.+|..+|+.
T Consensus 354 ~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~---~g~~v~~g~~dG~l~ald~~tG~~-- 428 (488)
T cd00216 354 PQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT---AGNLVFAGAADGYFRAFDATTGKE-- 428 (488)
T ss_pred ccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe---cCCeEEEECCCCeEEEEECCCCce--
Confidence 1125778888888888777665321 111 11222 457888899999999999999998
Q ss_pred ceeee
Q psy9598 802 YKWFH 806 (1915)
Q Consensus 802 ~~~~~ 806 (1915)
+-.+.
T Consensus 429 lW~~~ 433 (488)
T cd00216 429 LWKFR 433 (488)
T ss_pred eeEEE
Confidence 55443
No 405
>KOG2114|consensus
Probab=98.21 E-value=0.00016 Score=91.99 Aligned_cols=196 Identities=13% Similarity=0.200 Sum_probs=133.6
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCC-EEEEEEeCCCCEEEEEeCCC-----cEEEEECCCC-
Q psy9598 478 AVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE-ISDIAIDNRNILLAAGTVDK-----TIRIWNLQTL- 550 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~-I~~Lafspdg~~LaSgs~Dg-----tIrVWDl~tg- 550 (1915)
.|+| |++.+..+|.|+.+|.|.+.+- ..+.++.+..+... |..|....+..+|++.+.|+ .|+||++...
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 5555 5677899999999999988883 45666788888777 56665555557888887765 4999999632
Q ss_pred -----ceE--EEeec-----CCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecc--cCccccceeccCccccccccCC
Q psy9598 551 -----API--SVLVG-----HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK--LDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 551 -----~~~--~~l~~-----h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~--~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
.++ +.+.+ ...++.+++.+.+ -..+|+|-.+|.|..+.-+ ..... .......
T Consensus 104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~----l~~Iv~Gf~nG~V~~~~GDi~RDrgs----------r~~~~~~ 169 (933)
T KOG2114|consen 104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSED----LKTIVCGFTNGLVICYKGDILRDRGS----------RQDYSHR 169 (933)
T ss_pred CCCCcceeeeeeeeccCCCCCCCcceEEEEEcc----ccEEEEEecCcEEEEEcCcchhcccc----------ceeeecc
Confidence 233 12222 2456888888874 4899999999999888422 11111 1112234
Q ss_pred CCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 617 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
+..+|+.+++..++..++....-..|.+|.+.+.. .....+..|...+.|.+|++....|++|+. ..+.+|+..
T Consensus 170 ~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~--p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd 243 (933)
T KOG2114|consen 170 GKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRT--PSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSD 243 (933)
T ss_pred CCCCceeeEEecCCceeEEEEecceeEEEEecCCC--cceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCC
Confidence 56899999999998873333344579999996332 334457788889999999877665666654 457777654
No 406
>KOG4649|consensus
Probab=98.19 E-value=0.0029 Score=70.62 Aligned_cols=109 Identities=15% Similarity=0.013 Sum_probs=77.6
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEE-
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV- 566 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl- 566 (1915)
..+++.||..+.+.--|..+|.++..-. -...|-+-+.- -|.+++.|+..|.+.+.++.+|.....+..-. .|.+-
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~-~vk~~a 99 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE-TVKVRA 99 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehh-hhccce
Confidence 5688889999999999999998876432 12233332222 46689999999999999999998777665322 22221
Q ss_pred EeccCccCCCcEEEEEeCCCeEEEEecccCcccccee
Q psy9598 567 NFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603 (1915)
Q Consensus 567 ~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~ 603 (1915)
...+ ++.++..|+.|++....|..+..++.+..
T Consensus 100 ~~d~----~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 100 QCDF----DGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred EEcC----CCceEEEecCCCcEEEecccccceEEecc
Confidence 1222 45899999999999999998887665543
No 407
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.17 E-value=0.00042 Score=87.89 Aligned_cols=191 Identities=13% Similarity=0.039 Sum_probs=116.3
Q ss_pred cEEEEEEcCCCCE-EEEEECC---CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEE-eC--CCcEEEEECCCC
Q psy9598 478 AVFCVLFDKLGEV-IVTGADD---LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAG-TV--DKTIRIWNLQTL 550 (1915)
Q Consensus 478 ~V~~vafspdg~~-LaTGs~D---g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSg-s~--DgtIrVWDl~tg 550 (1915)
.+..-.|+|||+. ++..+.. ..|.++|+.+|+...... ..+.+.+..|+|||+.|+.. +. +..|.++|+.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 7888999999985 6644433 469999998887655433 45566778899999876644 33 356888898877
Q ss_pred ceEEEeecCCCCeEEEEeccCccCCCcEEEEEe-CCC--eEEEEecccCccccceeccCccccccccCCCCCceEEEEEC
Q psy9598 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTS-TDG--CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS 627 (1915)
Q Consensus 551 ~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs-~Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fs 627 (1915)
... .+..+.+......|+|++ +.|+..+ ..| .|.++|+.++... .+.+. + .. ...|+
T Consensus 268 ~~~-~LT~~~~~d~~p~~SPDG----~~I~F~Sdr~g~~~Iy~~dl~~g~~~-rlt~~-----------g-~~--~~~~S 327 (419)
T PRK04043 268 TLT-QITNYPGIDVNGNFVEDD----KRIVFVSDRLGYPNIFMKKLNSGSVE-QVVFH-----------G-KN--NSSVS 327 (419)
T ss_pred cEE-EcccCCCccCccEECCCC----CEEEEEECCCCCceEEEEECCCCCeE-eCccC-----------C-Cc--CceEC
Confidence 643 444444434466899943 5555554 344 4666677655321 11110 1 11 24899
Q ss_pred CCCcEEEEEeCC---------CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC-Cc--EEEEEccC
Q psy9598 628 PGGLFLATGSGD---------HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD-GT--ALIWYYKC 694 (1915)
Q Consensus 628 pdg~~Lasgs~D---------g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D-G~--I~IWDl~~ 694 (1915)
|+|+.|+..+.. ..|.+.|+.+.. ...+... .......|+|+|..|+..+.. |. +.+.++..
T Consensus 328 PDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~----~~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 328 TYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY----IRRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred CCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC----eEECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence 999988876653 257777774332 1222222 223357899999977665543 33 44444443
No 408
>KOG2114|consensus
Probab=98.16 E-value=0.00018 Score=91.59 Aligned_cols=221 Identities=12% Similarity=0.074 Sum_probs=138.2
Q ss_pred EEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCC-eEEEEeccCccCCCcEEEEEeCCC-----eEEEEecccCcc
Q psy9598 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDG-----CIGFWKYKLDID 598 (1915)
Q Consensus 525 afspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~-V~sl~fsp~~~~d~~~L~sgs~Dg-----tI~iWDl~~~~~ 598 (1915)
+|++.+..+|.|+.+|.|.+.+- +.+.+..++.+... |..+-... +..+|++.+.|+ .|+||++..-..
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~----~~~~L~sv~Ed~~~np~llkiw~lek~~~ 104 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILN----KQNFLFSVGEDEQGNPVLLKIWDLEKVDK 104 (933)
T ss_pred EEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhccc----CceEEEEEeecCCCCceEEEEecccccCC
Confidence 45788889999999998777663 23444677777666 44443332 336888877665 589999875421
Q ss_pred ccc-eeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecC-CCCCceeEEeccCCCCeeEEEEcCCCC
Q psy9598 599 ISK-TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQWSHSHL 676 (1915)
Q Consensus 599 ~~~-~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~-~~~~~~i~~l~~h~~~V~sl~fspdg~ 676 (1915)
-.. ........+.........++.+++++.+-..+|+|-.+|.|..+.-+- ...............+|+++++..++.
T Consensus 105 n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~ 184 (933)
T KOG2114|consen 105 NNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGK 184 (933)
T ss_pred CCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCc
Confidence 110 000000011111222456788999999999999999999999985421 112223333444567999999998888
Q ss_pred EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCce
Q psy9598 677 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL 756 (1915)
Q Consensus 677 ~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~ 756 (1915)
.++-...-..|.+|.+.... +.......++..+.|.++++....+++++ +..|.+|+.....+
T Consensus 185 s~lFv~Tt~~V~~y~l~gr~---------------p~~~~ld~~G~~lnCss~~~~t~qfIca~--~e~l~fY~sd~~~~ 247 (933)
T KOG2114|consen 185 SVLFVATTEQVMLYSLSGRT---------------PSLKVLDNNGISLNCSSFSDGTYQFICAG--SEFLYFYDSDGRGP 247 (933)
T ss_pred eeEEEEecceeEEEEecCCC---------------cceeeeccCCccceeeecCCCCccEEEec--CceEEEEcCCCcce
Confidence 63333344578888776322 11122345777888989887666466655 46799999876555
Q ss_pred EEEee-CCCCCe
Q psy9598 757 VQVLK-GHTNEV 767 (1915)
Q Consensus 757 i~~l~-gH~~~V 767 (1915)
...+. ||....
T Consensus 248 cfaf~~g~kk~~ 259 (933)
T KOG2114|consen 248 CFAFEVGEKKEM 259 (933)
T ss_pred eeeecCCCeEEE
Confidence 55555 555433
No 409
>KOG1275|consensus
Probab=98.15 E-value=1.8e-05 Score=100.45 Aligned_cols=169 Identities=20% Similarity=0.194 Sum_probs=124.2
Q ss_pred CCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC----
Q psy9598 463 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV---- 538 (1915)
Q Consensus 463 ~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~---- 538 (1915)
..+.+..+...--.+.|+-+. .+++++++|...|+|.+-|..+.+.++++..|++.|.++.. .|++|+++|.
T Consensus 164 l~~~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~ 239 (1118)
T KOG1275|consen 164 LNTEKETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRR 239 (1118)
T ss_pred cccceeeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeeccccc
Confidence 334444444333333454444 45899999999999999999999999999999999977654 5778998874
Q ss_pred -----CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccc
Q psy9598 539 -----DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNER 613 (1915)
Q Consensus 539 -----DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~ 613 (1915)
|.-|+|||++..+.+.-+.-+.++ .-+.|+|.- ...+++++..|...+-|..+-.. |......
T Consensus 240 ~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl---~t~~~V~S~sGq~q~vd~~~lsN--------P~~~~~~ 307 (1118)
T KOG1275|consen 240 YNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSL---TTRLAVTSQSGQFQFVDTATLSN--------PPAGVKM 307 (1118)
T ss_pred ccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccc---cceEEEEecccceeeccccccCC--------CccceeE
Confidence 567899999987777666655555 567888864 37889999999999988433211 1111111
Q ss_pred cCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEe
Q psy9598 614 IRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647 (1915)
Q Consensus 614 ~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl 647 (1915)
..+....+..++++++|..++.|..+|.|.+|.-
T Consensus 308 v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 308 VNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred EccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 2233456899999999999999999999999973
No 410
>KOG2066|consensus
Probab=98.11 E-value=0.00013 Score=92.37 Aligned_cols=147 Identities=14% Similarity=0.134 Sum_probs=106.2
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCC-----CCEEEEEeCCCcEEEEECCC--CceEEEee
Q psy9598 485 DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR-----NILLAAGTVDKTIRIWNLQT--LAPISVLV 557 (1915)
Q Consensus 485 spdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspd-----g~~LaSgs~DgtIrVWDl~t--g~~~~~l~ 557 (1915)
+-.|.+++|||.||+|.|..+.+.+...++. ...+|.+|+++|+ .+.+++||.-| +.++.-.= ..-...+.
T Consensus 80 ~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~ 157 (846)
T KOG2066|consen 80 ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLS 157 (846)
T ss_pred ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeee
Confidence 4569999999999999999999998888776 3468999999997 56899999888 66664321 11112455
Q ss_pred cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEe
Q psy9598 558 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 637 (1915)
Q Consensus 558 ~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs 637 (1915)
...|+|.+|.|.- ++++-++.+| |+|||+.++..+..+........... ....+.|.+.. .|+.|-
T Consensus 158 ~~eG~I~~i~W~g------~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~------fpphl~W~~~~-~LVIGW 223 (846)
T KOG2066|consen 158 EGEGPIHSIKWRG------NLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPEL------FPPHLHWQDED-RLVIGW 223 (846)
T ss_pred cCccceEEEEecC------cEEEEecCCC-cEEEeccccceeeccCCCCCCCCccc------CCCceEecCCC-eEEEec
Confidence 6678999999974 7888888888 89999998876655554432222222 23347777765 455554
Q ss_pred CCCeEEEEEec
Q psy9598 638 GDHHVRVYKMD 648 (1915)
Q Consensus 638 ~Dg~I~IwDl~ 648 (1915)
. .+|+|..+.
T Consensus 224 ~-d~v~i~~I~ 233 (846)
T KOG2066|consen 224 G-DSVKICSIK 233 (846)
T ss_pred C-CeEEEEEEe
Confidence 4 478888885
No 411
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.10 E-value=0.00065 Score=79.55 Aligned_cols=228 Identities=13% Similarity=0.039 Sum_probs=132.3
Q ss_pred CCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCC
Q psy9598 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618 (1915)
Q Consensus 539 DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1915)
+|+|..||..+|+.+....--. .+......+.. ++..+++++.++.|..||..++..+....+..+...
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~--~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~-------- 70 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGP-GIGGPVATAVP--DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISG-------- 70 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSS-SCSSEEETEEE--ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGS--------
T ss_pred CCEEEEEECCCCCEEEEEECCC-CCCCccceEEE--eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccc--------
Confidence 6899999999999988875311 12111211110 236788889999999999999987666655322111
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEe-ccCC---CCeeEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV-EEHS---DKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 694 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l-~~h~---~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~ 694 (1915)
. . ...+..+++++.++.|..+|..+ ...+... .... .....+.....+..++++..+|.|..+|+.+
T Consensus 71 -~---~--~~~~~~v~v~~~~~~l~~~d~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t 141 (238)
T PF13360_consen 71 -A---P--VVDGGRVYVGTSDGSLYALDAKT---GKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKT 141 (238)
T ss_dssp -G---E--EEETTEEEEEETTSEEEEEETTT---SCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTT
T ss_pred -e---e--eecccccccccceeeeEecccCC---cceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCC
Confidence 0 1 12344566666788888888633 2333331 1110 1112222333377899999999999999999
Q ss_pred CceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe-EEEEECCCCceEEEeeCCCCCeEEEEEc
Q psy9598 695 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ-IKIWDAFNGDLVQVLKGHTNEVFVLESH 773 (1915)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~-I~vwD~~tg~~i~~l~gH~~~V~sl~~s 773 (1915)
++.+..... .. .... . .......+..-.+..++ .++++.. ++. +.+ |+.+++.+.... ...+..+ ..
T Consensus 142 G~~~w~~~~-~~-~~~~---~-~~~~~~~~~~~~~~~~~-~v~~~~~-~g~~~~~-d~~tg~~~w~~~--~~~~~~~-~~ 209 (238)
T PF13360_consen 142 GKLLWKYPV-GE-PRGS---S-PISSFSDINGSPVISDG-RVYVSSG-DGRVVAV-DLATGEKLWSKP--ISGIYSL-PS 209 (238)
T ss_dssp TEEEEEEES-ST-T-SS------EEEETTEEEEEECCTT-EEEEECC-TSSEEEE-ETTTTEEEEEEC--SS-ECEC-EE
T ss_pred CcEEEEeec-CC-CCCC---c-ceeeecccccceEEECC-EEEEEcC-CCeEEEE-ECCCCCEEEEec--CCCccCC-ce
Confidence 986543321 10 0000 0 00011122233333345 6666666 675 555 999999765333 2223332 23
Q ss_pred cCCCCEEEEEecCceEEEEECCCCcc
Q psy9598 774 PFDSRVLLSAGHDGLIIIWDILSSKQ 799 (1915)
Q Consensus 774 p~dg~~LaSgs~DG~I~IWdl~s~~~ 799 (1915)
. .+..|+.++.+|.|.+||+.+++.
T Consensus 210 ~-~~~~l~~~~~~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 210 V-DGGTLYVTSSDGRLYALDLKTGKV 234 (238)
T ss_dssp C-CCTEEEEEETTTEEEEEETTTTEE
T ss_pred e-eCCEEEEEeCCCEEEEEECCCCCE
Confidence 3 567777777999999999999876
No 412
>KOG1920|consensus
Probab=98.08 E-value=0.0029 Score=83.87 Aligned_cols=252 Identities=17% Similarity=0.204 Sum_probs=149.8
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEec----
Q psy9598 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY---- 593 (1915)
Q Consensus 518 ~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl---- 593 (1915)
.+.|.++.|..++.-|+.+...|.|.+-|..+.... ....-.+.|.+++|+|+. .+++..+..++|.+-..
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~De----e~l~liT~~~tll~mT~~f~~ 142 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDE----ELLALITGRQTLLFMTKDFEP 142 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCC----cEEEEEeCCcEEEEEeccccc
Confidence 368999999999999999999999999988775432 222245689999999954 88888888888876433
Q ss_pred ccCccc----------cceecc-Cccccc--------------cccCC---CCCceEEEEECCCCcEEEEE-----eCCC
Q psy9598 594 KLDIDI----------SKTVFH-EPVMFN--------------ERIRP---GNAHILCSSFSPGGLFLATG-----SGDH 640 (1915)
Q Consensus 594 ~~~~~~----------~~~~~~-~~~~~~--------------~~~~~---~~~~V~~l~fspdg~~Lasg-----s~Dg 640 (1915)
-..+.+ ...... ....+. ....+ ....=++++|--||.++|+. ....
T Consensus 143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R 222 (1265)
T KOG1920|consen 143 IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR 222 (1265)
T ss_pred hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence 111111 000000 000000 00000 11223458999999998883 3337
Q ss_pred eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEe---CCCcEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 641 HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 641 ~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs---~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
.|+|||-.+. .-..-....+.-.+++|-|.|..+++-. .|+.|.+|.-+.-. ........
T Consensus 223 kirV~drEg~----Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~-------------hg~f~l~~ 285 (1265)
T KOG1920|consen 223 KIRVYDREGA----LNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLR-------------HGEFVLPF 285 (1265)
T ss_pred eEEEecccch----hhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcc-------------ccccccCC
Confidence 9999997411 1111122233456889999999888753 55678887543221 00011111
Q ss_pred ccccccEEEEEECCCCCEEEE---EEecCCeEEEEECCCCce--EEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEE
Q psy9598 718 TNKKIKVTMVAWDASDRWVIT---AINFNFQIKIWDAFNGDL--VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t---~s~~Dg~I~vwD~~tg~~--i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IW 792 (1915)
......|..++|+.++..|++ ... ...|++|-+.+... -+.+....... +.|+|.....|..-..+|.+.++
T Consensus 286 p~de~~ve~L~Wns~sdiLAv~~~~~e-~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~ 362 (1265)
T KOG1920|consen 286 PLDEKEVEELAWNSNSDILAVVTSNLE-NSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVR 362 (1265)
T ss_pred cccccchheeeecCCCCceeeeecccc-cceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEE
Confidence 122334889999999999887 333 44599999876532 23333332222 77888555555555466666665
Q ss_pred EC
Q psy9598 793 DI 794 (1915)
Q Consensus 793 dl 794 (1915)
++
T Consensus 363 ~~ 364 (1265)
T KOG1920|consen 363 DF 364 (1265)
T ss_pred EE
Confidence 54
No 413
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.07 E-value=1.1e-05 Score=65.64 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=35.9
Q ss_pred eeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy9598 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 504 (1915)
Q Consensus 467 ~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd 504 (1915)
++++++.+|.+.|++|+|+|++.+|+||+.|+.|+|||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 45678999999999999999999999999999999997
No 414
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.06 E-value=1e-05 Score=65.77 Aligned_cols=39 Identities=44% Similarity=0.723 Sum_probs=37.2
Q ss_pred CcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Q psy9598 508 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 508 g~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWD 546 (1915)
|+++.++.+|.+.|++|+|+|++.+|++|+.|++|+|||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467899999999999999999999999999999999997
No 415
>KOG1645|consensus
Probab=98.06 E-value=7.9e-05 Score=87.34 Aligned_cols=263 Identities=15% Similarity=0.083 Sum_probs=150.7
Q ss_pred EEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCce
Q psy9598 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI 621 (1915)
Q Consensus 542 IrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V 621 (1915)
|++.+..+.+....+.+|...|.+++|+|.. ..+|..++.+..|+|.|+.+...+...... ..+
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~---~GLl~~asl~nkiki~dlet~~~vssy~a~-------------~~~ 238 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFN---EGLLGLASLGNKIKIMDLETSCVVSSYIAY-------------NQI 238 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccc---cceeeeeccCceEEEEecccceeeeheecc-------------CCc
Confidence 6777766666677788899999999999964 358999999999999999988665554443 678
Q ss_pred EEEEECCCC-cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEc------CCCCEEEEEeCCCcEEEEEccC
Q psy9598 622 LCSSFSPGG-LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS------HSHLRFVSGSRDGTALIWYYKC 694 (1915)
Q Consensus 622 ~~l~fspdg-~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fs------pdg~~L~sgs~DG~I~IWDl~~ 694 (1915)
++++|.-+. .+|.+|..+|.|.|||++....+.....-.-...+|..|+.- +.|.+|+..+.+ +..|.+..
T Consensus 239 wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~ 316 (463)
T KOG1645|consen 239 WSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVF 316 (463)
T ss_pred eeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhc
Confidence 999998865 578888899999999997655443332222233455554432 234444444433 34565432
Q ss_pred CceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC-------eEEEEECCCCceEEEee-CCCC-
Q psy9598 695 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF-------QIKIWDAFNGDLVQVLK-GHTN- 765 (1915)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg-------~I~vwD~~tg~~i~~l~-gH~~- 765 (1915)
.. .+. .........+.+.++...+..+.++++...+- .+---|..+|..+..-+ +|.+
T Consensus 317 s~---------~~~----p~vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs 383 (463)
T KOG1645|consen 317 SA---------ECL----PCVLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGS 383 (463)
T ss_pred cc---------cCC----CcccccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCC
Confidence 21 000 11112223344555555555455554433111 00011222333333221 2211
Q ss_pred Ce-----EEEEEccCCCCEEE-EEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcC-CCC-EEEEEeCCCe
Q psy9598 766 EV-----FVLESHPFDSRVLL-SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP-DGT-TCALTDSYGH 837 (1915)
Q Consensus 766 ~V-----~sl~~sp~dg~~La-Sgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSp-dg~-~Lasg~~dG~ 837 (1915)
.- +...+.+.+.++|+ +|+....+.+||..+... +..+. -..+|.+++... +|. +|++-+ |..
T Consensus 384 ~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~ev--vQ~l~------~~epv~Dicp~~~n~~syLa~LT-d~~ 454 (463)
T KOG1645|consen 384 KQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEV--VQTLA------LSEPVLDICPNDTNGSSYLALLT-DDR 454 (463)
T ss_pred cccccccccceeccccccEEEEecCCcceeEEeccchhhe--eeecc------cCcceeecceeecCCcchhhhee-cce
Confidence 00 01112222445444 455667899999999887 66654 236777776543 444 454444 457
Q ss_pred EEEEeCC
Q psy9598 838 LLVYGLG 844 (1915)
Q Consensus 838 I~Iwdl~ 844 (1915)
++||...
T Consensus 455 v~Iyk~e 461 (463)
T KOG1645|consen 455 VHIYKNE 461 (463)
T ss_pred EEEEecC
Confidence 8887654
No 416
>KOG3617|consensus
Probab=98.05 E-value=0.00014 Score=91.20 Aligned_cols=322 Identities=11% Similarity=0.111 Sum_probs=174.6
Q ss_pred EEEEEcCCCCEEEEEEC----CCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEE
Q psy9598 480 FCVLFDKLGEVIVTGAD----DLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555 (1915)
Q Consensus 480 ~~vafspdg~~LaTGs~----Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~ 555 (1915)
+-+.|+|...++|+++- .|.|.||- .+|++..... ..-.+++|+|+|..-.|++|-.-|.+.||...+.+.-..
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv 96 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTV 96 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeee
Confidence 34568888888887764 57888886 5666443221 112256799999999999999999999999988776666
Q ss_pred eecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCc----
Q psy9598 556 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL---- 631 (1915)
Q Consensus 556 l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~---- 631 (1915)
...|..+|..+.|+++ |..|+++..-|.|.+|.+.....+.....- ...+. ..-...|..+++++.
T Consensus 97 ~~th~a~i~~l~wS~~----G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~-----~hel~-~~ltl~cfRL~~~~Ee~~~ 166 (1416)
T KOG3617|consen 97 VETHPAPIQGLDWSHD----GTVLMTLDNPGSVHLWRYDVIGEIQTSNIM-----QHELN-DQLTLWCFRLSYDREEKFK 166 (1416)
T ss_pred ccCCCCCceeEEecCC----CCeEEEcCCCceeEEEEeeeccccccchhh-----hhHhh-ceeeEEEEecCCChHHhhh
Confidence 7789999999999994 599999999999999987643222221111 01111 112345666677642
Q ss_pred --EEEEEeCCCeEE-EEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccC
Q psy9598 632 --FLATGSGDHHVR-VYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708 (1915)
Q Consensus 632 --~Lasgs~Dg~I~-IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~ 708 (1915)
..++.+.+..+- .++........ -..| .-.|+|..|+.++.+|+|+..|-...+......+..
T Consensus 167 laKaaVtgDe~alD~~fnwk~~~a~r----s~~k-------sgv~~g~~F~~~~~~GtVyyvdq~g~~~~V~k~dS~--- 232 (1416)
T KOG3617|consen 167 LAKAAVTGDESALDEPFNWKESLAER----SDEK-------SGVPKGTEFLFAGKSGTVYYVDQNGRQRTVHKLDSE--- 232 (1416)
T ss_pred hhhhhccCchhhhcccccCccchhhc----cccc-------cCCCCCcEEEEEcCCceEEEEcCCCcEEEEEEccch---
Confidence 123333333322 33331000000 0011 124688889999999998877644332211111110
Q ss_pred CCCccccccccccccEEEEEECCCCCEEEE------------------EEecCCeEEEEECCCCceEEE--ee-CCCCCe
Q psy9598 709 PHTKETSDETNKKIKVTMVAWDASDRWVIT------------------AINFNFQIKIWDAFNGDLVQV--LK-GHTNEV 767 (1915)
Q Consensus 709 ~~~~~~~~~~~~~~~V~~va~spdg~~L~t------------------~s~~Dg~I~vwD~~tg~~i~~--l~-gH~~~V 767 (1915)
......+....|.++.-.-...+++. |+. .|.|-+-.. +|-+... +. .....+
T Consensus 233 ----vQmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~Ggr-qGgiA~sEs-sGvLr~~eKyg~e~ge~~ 306 (1416)
T KOG3617|consen 233 ----VQMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGR-QGGIACSES-SGVLRKSEKYGLELGEGI 306 (1416)
T ss_pred ----HHHHHhcccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCc-cCccccccc-cccccCCcchhhhcCCce
Confidence 00000111111222111111111110 000 111111100 0100000 00 123468
Q ss_pred EEEEEccCCCCEEEEEecCceEEEEECCCCccc---cceeeeeeecCCCCcceEEEEEcCCCCEEEEEeC
Q psy9598 768 FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR---GYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS 834 (1915)
Q Consensus 768 ~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~---~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~ 834 (1915)
+|++++. .+..|+.|...|.|.+|--...... +...+...-.....+.|..+.|.|--..+|+-+.
T Consensus 307 ~c~cY~~-~~~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~~avn~~ 375 (1416)
T KOG3617|consen 307 LCMCYGE-KEIRLWAGTKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKSTAAVNTE 375 (1416)
T ss_pred EEEEEec-cceEEEecccCCcEEEeeecCccccCCCCcceEEecCchhhccceEEEEeccccchhhhhhh
Confidence 9999998 7788999999999999954332111 1112221112233478999999996665555444
No 417
>KOG2695|consensus
Probab=98.05 E-value=6.8e-06 Score=94.04 Aligned_cols=128 Identities=16% Similarity=0.164 Sum_probs=103.0
Q ss_pred CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-----cEEEEEeCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECC
Q psy9598 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG-----KLLATLRGCSGEISDIAIDN-RNILLAAGTVDKTIRIWNLQ 548 (1915)
Q Consensus 475 H~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg-----~~~~~l~gH~~~I~~Lafsp-dg~~LaSgs~DgtIrVWDl~ 548 (1915)
-.+.|.++.|.-.+.+|+.|+..|.|.+.|+..+ .+.+.|. |.+.|+||..-. ++++|++.+.+|+|.+||++
T Consensus 251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R 329 (425)
T KOG2695|consen 251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLR 329 (425)
T ss_pred cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeeh
Confidence 4577889999988999999999999999999865 3455554 899999998776 78899999999999999998
Q ss_pred CCce---EEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceecc
Q psy9598 549 TLAP---ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 605 (1915)
Q Consensus 549 tg~~---~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~ 605 (1915)
--++ +..+.||...-.-+-++-.. ....++++++|...+||.++.+..+.+..+.
T Consensus 330 ~~K~~~~V~qYeGHvN~~a~l~~~v~~--eeg~I~s~GdDcytRiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 330 ATKCKKSVMQYEGHVNLSAYLPAHVKE--EEGSIFSVGDDCYTRIWSLDSGHLLCTIPFP 387 (425)
T ss_pred hhhcccceeeeeccccccccccccccc--ccceEEEccCeeEEEEEecccCceeeccCCC
Confidence 7666 88888887654444443322 4468888999999999999999776666554
No 418
>KOG2695|consensus
Probab=98.05 E-value=8.5e-06 Score=93.28 Aligned_cols=152 Identities=16% Similarity=0.186 Sum_probs=110.0
Q ss_pred EEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcc
Q psy9598 634 ATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE 713 (1915)
Q Consensus 634 asgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~ 713 (1915)
++.+.+..|-+-++.+... ..+ ...+.|.++.|...+++++.|+..|.|..+|++... .+...
T Consensus 228 fs~G~sqqv~L~nvetg~~----qsf-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rn------------qG~~~ 290 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ----QSF-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRN------------QGNGW 290 (425)
T ss_pred ecccccceeEEEEeecccc----ccc-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecc------------cCCCc
Confidence 4445556677778743221 112 256789999999999999999999999999998762 00111
Q ss_pred ccccccccccEEEEEECC-CCCEEEEEEecCCeEEEEECCCCce---EEEeeCCCCCeEEEE--EccCCCCEEEEEecCc
Q psy9598 714 TSDETNKKIKVTMVAWDA-SDRWVITAINFNFQIKIWDAFNGDL---VQVLKGHTNEVFVLE--SHPFDSRVLLSAGHDG 787 (1915)
Q Consensus 714 ~~~~~~~~~~V~~va~sp-dg~~L~t~s~~Dg~I~vwD~~tg~~---i~~l~gH~~~V~sl~--~sp~dg~~LaSgs~DG 787 (1915)
.....-|...|+++..-. ++.+|++++. +|.|++||++--++ +.++.||.+.-.-+- +++ ....++++|.|.
T Consensus 291 ~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M-~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~-eeg~I~s~GdDc 368 (425)
T KOG2695|consen 291 CAQRLYHDSSVTSLQILQFSQQKLMASDM-TGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKE-EEGSIFSVGDDC 368 (425)
T ss_pred ceEEEEcCcchhhhhhhccccceEeeccC-cCceeEeeehhhhcccceeeeeccccccccccccccc-ccceEEEccCee
Confidence 111223667788877666 7888888877 99999999987777 999999976544443 345 566888899999
Q ss_pred eEEEEECCCCccccceeee
Q psy9598 788 LIIIWDILSSKQRGYKWFH 806 (1915)
Q Consensus 788 ~I~IWdl~s~~~~~~~~~~ 806 (1915)
..+||.+..+.. +.++.
T Consensus 369 ytRiWsl~~ghL--l~tip 385 (425)
T KOG2695|consen 369 YTRIWSLDSGHL--LCTIP 385 (425)
T ss_pred EEEEEecccCce--eeccC
Confidence 999999999887 55443
No 419
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.03 E-value=0.0017 Score=81.01 Aligned_cols=301 Identities=13% Similarity=0.093 Sum_probs=155.4
Q ss_pred cCCCCEEEEEE---------CCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEE
Q psy9598 485 DKLGEVIVTGA---------DDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555 (1915)
Q Consensus 485 spdg~~LaTGs---------~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~ 555 (1915)
|||+++++... ..+.+.|||+.++........ ...+....|||+|+.||... ++.|.++++.++...+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l 78 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL 78 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe
Confidence 57888877642 346799999999876654433 56788999999999999886 67899999887754432
Q ss_pred e-ec-------C---------CCCeEEEEeccCccCCCcEEEEEe-CCCeEEEEecccCccccceeccCccccccccCCC
Q psy9598 556 L-VG-------H---------QGIITGVNFCPLEVNGFNYLASTS-TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 617 (1915)
Q Consensus 556 l-~~-------h---------~~~V~sl~fsp~~~~d~~~L~sgs-~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1915)
- .| - -+.-.++-|+|++ ++|+... .+..|..+.+........ .
T Consensus 79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~----~~la~~~~d~~~v~~~~~~~~~~~~~---------------~ 139 (353)
T PF00930_consen 79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDS----KYLAFLRFDEREVPEYPLPDYSPPDS---------------Q 139 (353)
T ss_dssp ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTS----SEEEEEEEE-TTS-EEEEEEESSSTE---------------S
T ss_pred ccccceeEEcCccceeccccccccccceEECCCC----CEEEEEEECCcCCceEEeeccCCccc---------------c
Confidence 2 12 0 1223567789854 5655544 344444443321100000 0
Q ss_pred CCceEEEEECCCCcEEEEEeCCC--eEEEEEecCCCCCceeEEe---ccCCCCeeEEEEcCCCCEEEEEe--CCC---cE
Q psy9598 618 NAHILCSSFSPGGLFLATGSGDH--HVRVYKMDGVDSPLGILEV---EEHSDKVDSIQWSHSHLRFVSGS--RDG---TA 687 (1915)
Q Consensus 618 ~~~V~~l~fspdg~~Lasgs~Dg--~I~IwDl~~~~~~~~i~~l---~~h~~~V~sl~fspdg~~L~sgs--~DG---~I 687 (1915)
.-.+..+.+-.-| ..+. .+.|+++.+.... .+... ..-...+..+.|.+++..|+..- .+. .+
T Consensus 140 yp~~~~~~YPk~G------~~np~v~l~v~~~~~~~~~-~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l 212 (353)
T PF00930_consen 140 YPEVESIRYPKAG------DPNPRVSLFVVDLASGKTT-ELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDL 212 (353)
T ss_dssp S-EEEEEE--BTT------S---EEEEEEEESSSTCCC-EE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEE
T ss_pred CCcccccccCCCC------CcCCceEEEEEECCCCcEE-EeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEE
Confidence 0122333332222 2222 3556777433321 22211 23455688999999988444433 332 36
Q ss_pred EEEEccCCceEEeeecccccCCCCccccccccccccEEEEEE-CCCCCEEEEEEecCCe--EEEEECCCCceEEEeeCCC
Q psy9598 688 LIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAW-DASDRWVITAINFNFQ--IKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 688 ~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~-spdg~~L~t~s~~Dg~--I~vwD~~tg~~i~~l~gH~ 764 (1915)
.++|..++.+......... . --.....+.| .+++..++..+..+|. |.+++...+. ...+....
T Consensus 213 ~~~d~~tg~~~~~~~e~~~---~---------Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~ 279 (353)
T PF00930_consen 213 VLCDASTGETRVVLEETSD---G---------WVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGD 279 (353)
T ss_dssp EEEEECTTTCEEEEEEESS---S---------SSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SS
T ss_pred EEEECCCCceeEEEEecCC---c---------ceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCc
Confidence 6667776654433311110 0 0011123344 3666665555555774 5556665555 44555455
Q ss_pred CCeEE-EEEccCCCCEEEEEecCc----eEEEEECC-CCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeC
Q psy9598 765 NEVFV-LESHPFDSRVLLSAGHDG----LIIIWDIL-SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS 834 (1915)
Q Consensus 765 ~~V~s-l~~sp~dg~~LaSgs~DG----~I~IWdl~-s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~ 834 (1915)
-.|.. +.|.+..+.++++|..++ .|+.-++. .+.. ..+. .. .+.-..+.|||+|++++..++
T Consensus 280 ~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~---~~LT---~~--~~~~~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 280 WEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEP---KCLT---CE--DGDHYSASFSPDGKYYVDTYS 347 (353)
T ss_dssp S-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEE---EESS---TT--SSTTEEEEE-TTSSEEEEEEE
T ss_pred eeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCe---Eecc---CC--CCCceEEEECCCCCEEEEEEc
Confidence 56744 567774455556666533 45555565 3332 2222 11 112278999999999887654
No 420
>KOG2066|consensus
Probab=98.01 E-value=0.00022 Score=90.27 Aligned_cols=189 Identities=19% Similarity=0.200 Sum_probs=128.0
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcc
Q psy9598 519 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598 (1915)
Q Consensus 519 ~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~ 598 (1915)
..|+|++++ +.+|+-|+.+|.|++.+.+. .+ .+...|+.. + .+|.++++||.||+|.|..+.+...
T Consensus 40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~-~~-~~~~~~s~~--------~--~~Gey~asCS~DGkv~I~sl~~~~~ 105 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGTHRGAVYLTTCQG-NP-KTNFDHSSS--------I--LEGEYVASCSDDGKVVIGSLFTDDE 105 (846)
T ss_pred hHHHHHHhh--cceeeeccccceEEEEecCC-cc-ccccccccc--------c--cCCceEEEecCCCcEEEeeccCCcc
Confidence 456677765 56899999999999999763 33 333344433 1 2679999999999999999988877
Q ss_pred ccceeccCccccccccCCCCCceEEEEECCC-----CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC
Q psy9598 599 ISKTVFHEPVMFNERIRPGNAHILCSSFSPG-----GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 673 (1915)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-----g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp 673 (1915)
.....+. .++.+++++|+ .+.+++||.-| +.++.-.-.+....+ .+....++|.+|.|.
T Consensus 106 ~~~~df~-------------rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~- 169 (846)
T KOG2066|consen 106 ITQYDFK-------------RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWR- 169 (846)
T ss_pred ceeEecC-------------CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEec-
Confidence 6666666 66889999997 46789999988 777764222222222 466778999999996
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 674 dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
|+++|-++.+| |+|||+.+.+.+....... .......--..+.|.++.+.++ |- ..+|+|..++
T Consensus 170 -g~lIAWand~G-v~vyd~~~~~~l~~i~~p~----------~~~R~e~fpphl~W~~~~~LVI-GW--~d~v~i~~I~ 233 (846)
T KOG2066|consen 170 -GNLIAWANDDG-VKVYDTPTRQRLTNIPPPS----------QSVRPELFPPHLHWQDEDRLVI-GW--GDSVKICSIK 233 (846)
T ss_pred -CcEEEEecCCC-cEEEeccccceeeccCCCC----------CCCCcccCCCceEecCCCeEEE-ec--CCeEEEEEEe
Confidence 66777776665 8999998877443221110 1111222334588887665554 32 3478887765
No 421
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.00 E-value=0.0022 Score=76.45 Aligned_cols=280 Identities=13% Similarity=0.146 Sum_probs=156.9
Q ss_pred CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeC----------CCcEEEEECCCCceEEEeecCCC-C----
Q psy9598 498 LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV----------DKTIRIWNLQTLAPISVLVGHQG-I---- 562 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~----------DgtIrVWDl~tg~~~~~l~~h~~-~---- 562 (1915)
+.|.|+|..+++.+..+.+ +-.-.+.++|+++.+++++. .-.|.+||..+..+...+.--.+ .
T Consensus 17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 4799999999998888763 23344678999999887542 34699999999988875543222 1
Q ss_pred --eEEEEeccCccCCCcEEEEE--eCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCC-CcEEEEEe
Q psy9598 563 --ITGVNFCPLEVNGFNYLAST--STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG-GLFLATGS 637 (1915)
Q Consensus 563 --V~sl~fsp~~~~d~~~L~sg--s~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspd-g~~Lasgs 637 (1915)
...++++. ++++++.. +--.+|.|.|+...+.+..+... + |...-|. ..-+.+-|
T Consensus 95 ~~~~~~~ls~----dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P-----------G-----C~~iyP~~~~~F~~lC 154 (342)
T PF06433_consen 95 PYKNMFALSA----DGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP-----------G-----CWLIYPSGNRGFSMLC 154 (342)
T ss_dssp --GGGEEE-T----TSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT-----------S-----EEEEEEEETTEEEEEE
T ss_pred ccccceEEcc----CCcEEEEEccCCCCeEEEEECCCCceeeeecCC-----------C-----EEEEEecCCCceEEEe
Confidence 11223333 22333332 22344555555555433222221 1 2222332 24577888
Q ss_pred CCCeEEEEEecCCCCCceeEE--eccCCCCe-eEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccc
Q psy9598 638 GDHHVRVYKMDGVDSPLGILE--VEEHSDKV-DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKET 714 (1915)
Q Consensus 638 ~Dg~I~IwDl~~~~~~~~i~~--l~~h~~~V-~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~ 714 (1915)
.||.+....++.........+ +..-..++ ..-++...+..++--+..|.|+--|+.......... . .... ...
T Consensus 155 ~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~-~-~~~t--~~e 230 (342)
T PF06433_consen 155 GDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKP-W-SLLT--DAE 230 (342)
T ss_dssp TTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEE-E-ESS---HHH
T ss_pred cCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCc-c-cccC--ccc
Confidence 999999988864433221111 11112222 233344555566667889999988887765322110 0 0000 000
Q ss_pred cccccccccEEEEEECCCCCEEEEEEec--CC-------eEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEE-e
Q psy9598 715 SDETNKKIKVTMVAWDASDRWVITAINF--NF-------QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA-G 784 (1915)
Q Consensus 715 ~~~~~~~~~V~~va~spdg~~L~t~s~~--Dg-------~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSg-s 784 (1915)
....-..+...-+++++....|++.... +| .|.+||+.+++.+..+... ..+.+|.++..+..+|++. .
T Consensus 231 ~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~ 309 (342)
T PF06433_consen 231 KADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSA 309 (342)
T ss_dssp HHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEET
T ss_pred cccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcC
Confidence 0011122333447777766666654330 11 4899999999999998742 3477899998555577655 4
Q ss_pred cCceEEEEECCCCccccceeee
Q psy9598 785 HDGLIIIWDILSSKQRGYKWFH 806 (1915)
Q Consensus 785 ~DG~I~IWdl~s~~~~~~~~~~ 806 (1915)
.+|.|.|||..+|+. +..+.
T Consensus 310 ~~~~l~v~D~~tGk~--~~~~~ 329 (342)
T PF06433_consen 310 GDGTLDVYDAATGKL--VRSIE 329 (342)
T ss_dssp TTTEEEEEETTT--E--EEEE-
T ss_pred CCCeEEEEeCcCCcE--Eeehh
Confidence 589999999999988 66554
No 422
>KOG4649|consensus
Probab=97.99 E-value=0.0087 Score=66.98 Aligned_cols=104 Identities=14% Similarity=0.082 Sum_probs=73.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEE
Q psy9598 487 LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 566 (1915)
Q Consensus 487 dg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl 566 (1915)
-|.+++.|+..|.+.+.++.||..+..+.....--......+++.++..|+.|++....|..+..++...+...+...+-
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP 141 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSP 141 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccc
Confidence 37889999999999999999998887775433222334557789999999999999999999988888876444333333
Q ss_pred EeccCccCCCcEEEEEeCCCeEEEEecc
Q psy9598 567 NFCPLEVNGFNYLASTSTDGCIGFWKYK 594 (1915)
Q Consensus 567 ~fsp~~~~d~~~L~sgs~DgtI~iWDl~ 594 (1915)
+..| ....|+.+...|.|.--...
T Consensus 142 ~i~~----g~~sly~a~t~G~vlavt~~ 165 (354)
T KOG4649|consen 142 VIAP----GDGSLYAAITAGAVLAVTKN 165 (354)
T ss_pred eecC----CCceEEEEeccceEEEEccC
Confidence 3444 12445555555655444433
No 423
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.97 E-value=0.0022 Score=81.84 Aligned_cols=227 Identities=7% Similarity=-0.060 Sum_probs=127.0
Q ss_pred CCCEEEEEeC-CCcEEEEECCCCceEEEeec-CCCCeEEEEec--cCc-------------cCCCcEEE-EEeCCCeEEE
Q psy9598 529 RNILLAAGTV-DKTIRIWNLQTLAPISVLVG-HQGIITGVNFC--PLE-------------VNGFNYLA-STSTDGCIGF 590 (1915)
Q Consensus 529 dg~~LaSgs~-DgtIrVWDl~tg~~~~~l~~-h~~~V~sl~fs--p~~-------------~~d~~~L~-sgs~DgtI~i 590 (1915)
||++|+.-.. +..|-..++...++-..+.- ....+.+++|- |.. ++++..+. +.-..+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 6788887663 55666667766555433321 11222233332 211 01333332 2223455666
Q ss_pred EecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCC----eEEEEEecCCCCCceeEEeccCCCCe
Q psy9598 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH----HVRVYKMDGVDSPLGILEVEEHSDKV 666 (1915)
Q Consensus 591 WDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg----~I~IwDl~~~~~~~~i~~l~~h~~~V 666 (1915)
.|..+.....++... +...-+.++++|.++++.+.+. ++...+.. ... .+..+.- ..+
T Consensus 220 ID~etmeV~~qV~Vd-------------gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~--e~d-~~vvfni--~~i 281 (635)
T PRK02888 220 VDAETMEVAWQVMVD-------------GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAA--ERD-WVVVFNI--ARI 281 (635)
T ss_pred EECccceEEEEEEeC-------------CCcccceECCCCCEEEEeccCcccCcceeeeccc--cCc-eEEEEch--HHH
Confidence 666655443333332 2345678899999988876422 22222221 100 0100000 000
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEEccC----C-ceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe
Q psy9598 667 DSIQWSHSHLRFVSGSRDGTALIWYYKC----S-QWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 741 (1915)
Q Consensus 667 ~sl~fspdg~~L~sgs~DG~I~IWDl~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~ 741 (1915)
.++.++|++... .++.|.+.|..+ + ..... ..-......+.++|||+++++++.
T Consensus 282 --ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~y-----------------IPVGKsPHGV~vSPDGkylyVank 340 (635)
T PRK02888 282 --EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRY-----------------VPVPKNPHGVNTSPDGKYFIANGK 340 (635)
T ss_pred --HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEE-----------------EECCCCccceEECCCCCEEEEeCC
Confidence 023456776665 367899999887 2 21111 112334566899999999999998
Q ss_pred cCCeEEEEECCCCce------------EEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 742 FNFQIKIWDAFNGDL------------VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 742 ~Dg~I~vwD~~tg~~------------i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
.+.+|.|+|+.+.+. +....--.++ ...+|.+ +|....|..-|..|..|++..
T Consensus 341 lS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGP-LHTaFDg-~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 341 LSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGP-LHTAFDG-RGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCc-ceEEECC-CCCEEEeEeecceeEEEehHH
Confidence 899999999987542 3333332233 4567888 788888888999999999976
No 424
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.93 E-value=0.015 Score=72.81 Aligned_cols=76 Identities=20% Similarity=0.288 Sum_probs=63.2
Q ss_pred CCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy9598 762 GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 841 (1915)
Q Consensus 762 gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iw 841 (1915)
...+.|.+++++| +...|+.|+.||+|.+||...+.. . +. ...-.++.++|+|+|.+|++|+.-|.|.+|
T Consensus 257 pL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~~t--~--~~-----ka~~~P~~iaWHp~gai~~V~s~qGelQ~F 326 (545)
T PF11768_consen 257 PLPSQVICCARSP-SEDKLVLGCEDGSIILYDTTRGVT--L--LA-----KAEFIPTLIAWHPDGAIFVVGSEQGELQCF 326 (545)
T ss_pred ecCCcceEEecCc-ccceEEEEecCCeEEEEEcCCCee--e--ee-----eecccceEEEEcCCCcEEEEEcCCceEEEE
Confidence 5677899999999 889999999999999999977643 1 11 123457889999999999999999999999
Q ss_pred eCCCCc
Q psy9598 842 GLGGFK 847 (1915)
Q Consensus 842 dl~s~~ 847 (1915)
|+.-+-
T Consensus 327 D~ALsp 332 (545)
T PF11768_consen 327 DMALSP 332 (545)
T ss_pred EeecCc
Confidence 998543
No 425
>KOG3621|consensus
Probab=97.84 E-value=0.002 Score=81.11 Aligned_cols=146 Identities=13% Similarity=0.191 Sum_probs=98.1
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEE-eecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEeccc
Q psy9598 517 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV-LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595 (1915)
Q Consensus 517 H~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~-l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~ 595 (1915)
|...|.--+++..+.+|+.|+.-|.|.+|+-.++..... ..+..+.+..+..+++. .++|.|+..|.|.++.+..
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e----~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVE----YLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchh----HhhhhhcCCceEEeehhhc
Confidence 344555556778889999999999999999877654332 22344556666777643 7888899999999998876
Q ss_pred CccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecC-CCCCceeEEeccCCCCeeEEEEc
Q psy9598 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQWS 672 (1915)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~-~~~~~~i~~l~~h~~~V~sl~fs 672 (1915)
........+. ..-..|...|+|++|++++..|++|...|.|.+-.++. .........+....+.|..|.+.
T Consensus 108 ~~p~~~~~~t------~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 108 ELPRDLDYVT------PCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred cCCCcceeec------cccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence 4322111111 11113678999999999999999999999999988854 11112222333345566666554
No 426
>KOG1008|consensus
Probab=97.84 E-value=1.2e-05 Score=98.53 Aligned_cols=201 Identities=14% Similarity=0.220 Sum_probs=129.2
Q ss_pred CCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCcE--EEEEeCCCCCEEEEEEeC-CCCEEEEEe----CCCcEEEEE
Q psy9598 476 LSAVFCVLFDKL--GEVIVTGADDLLIKLWRARDGKL--LATLRGCSGEISDIAIDN-RNILLAAGT----VDKTIRIWN 546 (1915)
Q Consensus 476 ~~~V~~vafspd--g~~LaTGs~Dg~I~IWd~~tg~~--~~~l~gH~~~I~~Lafsp-dg~~LaSgs----~DgtIrVWD 546 (1915)
...+.|+++.-+ ..++++|..+|.|.+-.+....- .....+|...+++++|++ |.++||+|- .|..+.|||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 345667776543 35788999999999988754322 234567888999999998 556777773 367899999
Q ss_pred CCCC--ceE--EEeec-CCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCce
Q psy9598 547 LQTL--API--SVLVG-HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI 621 (1915)
Q Consensus 547 l~tg--~~~--~~l~~-h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V 621 (1915)
+.++ .+. ..+.+ -.....+++|.. +..++++|.....+.++|++..... ...+. +..+
T Consensus 136 i~s~ltvPke~~~fs~~~l~gqns~cwlr----d~klvlaGm~sr~~~ifdlRqs~~~-~~svn------------Tk~v 198 (783)
T KOG1008|consen 136 INSLLTVPKESPLFSSSTLDGQNSVCWLR----DTKLVLAGMTSRSVHIFDLRQSLDS-VSSVN------------TKYV 198 (783)
T ss_pred cccccCCCccccccccccccCcccccccc----Ccchhhcccccchhhhhhhhhhhhh-hhhhh------------hhhc
Confidence 9876 222 12222 334566788875 4488999999999999998743211 11111 1345
Q ss_pred EEEEECC-CCcEEEEEeCCCeEEEEE-ecCCCCCceeEEe--ccCCCCeeEEEEcCCCC-EEEEEe-CCCcEEEEEccC
Q psy9598 622 LCSSFSP-GGLFLATGSGDHHVRVYK-MDGVDSPLGILEV--EEHSDKVDSIQWSHSHL-RFVSGS-RDGTALIWYYKC 694 (1915)
Q Consensus 622 ~~l~fsp-dg~~Lasgs~Dg~I~IwD-l~~~~~~~~i~~l--~~h~~~V~sl~fspdg~-~L~sgs-~DG~I~IWDl~~ 694 (1915)
..+.+.| .++++++-. ||.|.+|| ......+..+..- ......+..++|+|... .+++.+ ..++|+++|+..
T Consensus 199 qG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 199 QGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred ccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 6677888 666776654 99999999 3332222221110 11122489999999643 344444 557899998763
No 427
>KOG3621|consensus
Probab=97.83 E-value=0.0019 Score=81.38 Aligned_cols=117 Identities=18% Similarity=0.216 Sum_probs=91.1
Q ss_pred CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE-EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceE
Q psy9598 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT-LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPI 553 (1915)
Q Consensus 475 H~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~-l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~ 553 (1915)
|...|.--+++..+.+|+.|+.-|.|.+|+-.++..... ..|..+.+..+.++++..++|+|+..|.|.|+-++.+.+-
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 345555566777899999999999999999887765443 3345566777788999999999999999999988764331
Q ss_pred ---EEe---ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEeccc
Q psy9598 554 ---SVL---VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595 (1915)
Q Consensus 554 ---~~l---~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~ 595 (1915)
..- ..|...|++++|++ ++..|++|...|.|.+-.+.+
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~----~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSK----NGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cceeeccccccCCceEEEEEecc----cccEEeecCCCceEEEEEech
Confidence 111 23778999999999 458999999999999887776
No 428
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.81 E-value=0.008 Score=71.02 Aligned_cols=248 Identities=15% Similarity=0.144 Sum_probs=147.2
Q ss_pred EEEEeccCccCCCcEEEEEeCCCe-EEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEe-----
Q psy9598 564 TGVNFCPLEVNGFNYLASTSTDGC-IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS----- 637 (1915)
Q Consensus 564 ~sl~fsp~~~~d~~~L~sgs~Dgt-I~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs----- 637 (1915)
..++.+|. ....++.+-.-|+ +.+||..++.....+... -...+.+| .+||+||++|++.-
T Consensus 8 H~~a~~p~---~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~----~gRHFyGH------g~fs~dG~~LytTEnd~~~ 74 (305)
T PF07433_consen 8 HGVAAHPT---RPEAVAFARRPGTFALVFDCRTGQLLQRLWAP----PGRHFYGH------GVFSPDGRLLYTTENDYET 74 (305)
T ss_pred cceeeCCC---CCeEEEEEeCCCcEEEEEEcCCCceeeEEcCC----CCCEEecC------EEEcCCCCEEEEeccccCC
Confidence 35666773 3467777777664 678899888765444322 12223334 68999999999864
Q ss_pred CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC-------CCcEEEEEccCCceEEeeecccccCCC
Q psy9598 638 GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR-------DGTALIWYYKCSQWRFIRLDMNTCLPH 710 (1915)
Q Consensus 638 ~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~-------DG~I~IWDl~~~~~~~~~~~~~~~~~~ 710 (1915)
..|.|-|||.. .....+.++..|.-.-..|.+.|+|..|+++-. .|..++ ++.+.+.-...++..+-...
T Consensus 75 g~G~IgVyd~~--~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kL-Nl~tM~psL~~ld~~sG~ll 151 (305)
T PF07433_consen 75 GRGVIGVYDAA--RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKL-NLDTMQPSLVYLDARSGALL 151 (305)
T ss_pred CcEEEEEEECc--CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceec-ChhhcCCceEEEecCCCcee
Confidence 35899999994 456778888888888888999999987776531 133333 33333322222211110000
Q ss_pred CccccccccccccEEEEEECCCCCEEEEEEecCC-------eEEEEECCCCceEEEee-------CCCCCeEEEEEccCC
Q psy9598 711 TKETSDETNKKIKVTMVAWDASDRWVITAINFNF-------QIKIWDAFNGDLVQVLK-------GHTNEVFVLESHPFD 776 (1915)
Q Consensus 711 ~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg-------~I~vwD~~tg~~i~~l~-------gH~~~V~sl~~sp~d 776 (1915)
.........+...|..++++.+|..++..-. .| .|-++.. +..+..+. .-.+.|-+|+++. +
T Consensus 152 ~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~-qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~-~ 227 (305)
T PF07433_consen 152 EQVELPPDLHQLSIRHLAVDGDGTVAFAMQY-QGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADR-D 227 (305)
T ss_pred eeeecCccccccceeeEEecCCCcEEEEEec-CCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeC-C
Confidence 0001111346778999999999877665443 33 2333332 33233332 2346799999999 7
Q ss_pred CCEE-EEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9598 777 SRVL-LSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 777 g~~L-aSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwd 842 (1915)
+.++ +|+-.-|++.+||..++.. +.... ..-+..++-.+++ +++ ++..|.+....
T Consensus 228 g~~ia~tsPrGg~~~~~d~~tg~~--~~~~~-------l~D~cGva~~~~~-f~~-ssG~G~~~~~~ 283 (305)
T PF07433_consen 228 GRLIAVTSPRGGRVAVWDAATGRL--LGSVP-------LPDACGVAPTDDG-FLV-SSGQGQLIRLS 283 (305)
T ss_pred CCEEEEECCCCCEEEEEECCCCCE--eeccc-------cCceeeeeecCCc-eEE-eCCCccEEEcc
Confidence 7655 5555678999999999987 33221 2335556666666 444 44445544333
No 429
>KOG1897|consensus
Probab=97.80 E-value=0.064 Score=70.35 Aligned_cols=343 Identities=13% Similarity=0.174 Sum_probs=183.0
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE-eCCCCCEEEEEEeCC------CCEEEEEeCCCcEEEEEC-
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNR------NILLAAGTVDKTIRIWNL- 547 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l-~gH~~~I~~Lafspd------g~~LaSgs~DgtIrVWDl- 547 (1915)
.+.+++.+.+.+...++.++.++.+....+..+.+..+. ......|.|+.++|- .++++.|.++..+.+.-.
T Consensus 487 p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~ 566 (1096)
T KOG1897|consen 487 PGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFL 566 (1096)
T ss_pred CCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEEC
Confidence 355666666666666777777777777777666532222 123568999999974 237888988776655433
Q ss_pred CCCceEEEe-ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccc--e--ec-cCccccccccCCCCCce
Q psy9598 548 QTLAPISVL-VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK--T--VF-HEPVMFNERIRPGNAHI 621 (1915)
Q Consensus 548 ~tg~~~~~l-~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~--~--~~-~~~~~~~~~~~~~~~~V 621 (1915)
.....+... .+-..-..+|-++... .+..+|+++..||.+..|-+........ . .+ ..|..+..........|
T Consensus 567 pd~~~~~~~~l~~~~iPRSIl~~~~e-~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~v 645 (1096)
T KOG1897|consen 567 PDLILITHEQLSGEIIPRSILLTTFE-GDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAV 645 (1096)
T ss_pred CCcceeeeeccCCCccchheeeEEee-ccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEE
Confidence 333322222 1222222344444332 2468999999999998775544322111 1 11 12222222111112222
Q ss_pred EEEE------ECCCC------------------------cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEE
Q psy9598 622 LCSS------FSPGG------------------------LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQW 671 (1915)
Q Consensus 622 ~~l~------fspdg------------------------~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~f 671 (1915)
.|++ ++.++ ..|+++ ..+.+.+.-++... ...+.++. -......+++
T Consensus 646 fa~sdrP~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~l~~~-~~~~l~i~tid~iq-kl~irtvp-l~~~prrI~~ 722 (1096)
T KOG1897|consen 646 FALSDRPTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDSLASA-NGGALTIGTIDEIQ-KLHIRTVP-LGESPRRICY 722 (1096)
T ss_pred EEeCCCCEEEEecCCcEEEeccchHHhhhhcccccccCCceEEEe-cCCceEEEEecchh-hcceeeec-CCCChhheEe
Confidence 2221 11111 223333 23456666553211 11222222 2334566777
Q ss_pred cCCCCEEEEEeCCC--------------cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCC-CCEE
Q psy9598 672 SHSHLRFVSGSRDG--------------TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDAS-DRWV 736 (1915)
Q Consensus 672 spdg~~L~sgs~DG--------------~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spd-g~~L 736 (1915)
.+....+++.+.-+ .++++|-.+.+.... ...........|.++.|..| +.++
T Consensus 723 q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~------------hef~~~E~~~Si~s~~~~~d~~t~~ 790 (1096)
T KOG1897|consen 723 QESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSS------------HEFERNETALSIISCKFTDDPNTYY 790 (1096)
T ss_pred cccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEee------------ccccccceeeeeeeeeecCCCceEE
Confidence 76555555544321 234444433332111 01111122345666668877 7777
Q ss_pred EEEEe---------cCCeEEEEECCCCceEEEeeCC--CCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceee
Q psy9598 737 ITAIN---------FNFQIKIWDAFNGDLVQVLKGH--TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805 (1915)
Q Consensus 737 ~t~s~---------~Dg~I~vwD~~tg~~i~~l~gH--~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~ 805 (1915)
++|.+ ..|.|.||.+..+..+..+..| .+.|.++..- +|++||. -...|+||+..+.+. ++.
T Consensus 791 vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f--ngkllA~--In~~vrLye~t~~~e--Lr~- 863 (1096)
T KOG1897|consen 791 VVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF--NGKLLAG--INQSVRLYEWTTERE--LRI- 863 (1096)
T ss_pred EEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh--CCeEEEe--cCcEEEEEEccccce--ehh-
Confidence 77764 3577888877664444444333 3456665543 4666654 456899999988755 332
Q ss_pred eeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 806 HNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 806 ~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
...+..++..+...-.|..||+|+.-+.+.+.....
T Consensus 864 ----e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~ 899 (1096)
T KOG1897|consen 864 ----ECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKG 899 (1096)
T ss_pred ----hhcccCCeEEEEEEecCcEEEEeeccceEEEEEEec
Confidence 224557788888899999999999988887766554
No 430
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.80 E-value=0.011 Score=74.13 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=62.8
Q ss_pred CCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy9598 616 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 616 ~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~ 695 (1915)
+..+.|.|++++|+...|+.|+.||+|.+||.... +..+..+.-..+.++|+|+|..|++|+..|.+.+||+.-.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~-----~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG-----VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCC-----eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 44578999999999999999999999999998432 2222334456788999999999999999999999998755
Q ss_pred c
Q psy9598 696 Q 696 (1915)
Q Consensus 696 ~ 696 (1915)
.
T Consensus 332 p 332 (545)
T PF11768_consen 332 P 332 (545)
T ss_pred c
Confidence 4
No 431
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.74 E-value=0.016 Score=73.39 Aligned_cols=252 Identities=12% Similarity=0.125 Sum_probs=129.6
Q ss_pred cEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCc
Q psy9598 541 TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 620 (1915)
Q Consensus 541 tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1915)
.|.||+.. |..+..+.-..+.|.++.|+.. ..|++...||++++||+.... .+....... ...-....
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~-----e~LvvV~~dG~v~vy~~~G~~---~fsl~~~i~---~~~v~e~~ 129 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDD-----EELVVVQSDGTVRVYDLFGEF---QFSLGEEIE---EEKVLECR 129 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCC-----CeEEEEEcCCEEEEEeCCCce---eechhhhcc---ccCccccc
Confidence 37777754 5555555433488999999863 578888899999999987443 111111110 00011122
Q ss_pred eEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCce---eEEecc-------CCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q psy9598 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLG---ILEVEE-------HSDKVDSIQWSHSHLRFVSGSRDGTALIW 690 (1915)
Q Consensus 621 V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~---i~~l~~-------h~~~V~sl~fspdg~~L~sgs~DG~I~IW 690 (1915)
+.+..+..+|-.+++ .++.|.+.. +...+.. ...+.. +........++.+....+....++.+.+-
T Consensus 130 i~~~~~~~~GivvLt--~~~~~~~v~--n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i 205 (410)
T PF04841_consen 130 IFAIWFYKNGIVVLT--GNNRFYVVN--NIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYII 205 (410)
T ss_pred ccccccCCCCEEEEC--CCCeEEEEe--CccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEE
Confidence 333344445633443 333333332 2121111 111111 11100012234444444444444555433
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCC-CCCeEE
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH-TNEVFV 769 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH-~~~V~s 769 (1915)
+-.... .....+.+..+++||+|++|+.-.. +|.+.|....-.+.+..+... ......
T Consensus 206 ~~~~~~--------------------~i~~~~~i~~iavSpng~~iAl~t~-~g~l~v~ssDf~~~~~e~~~~~~~~p~~ 264 (410)
T PF04841_consen 206 DENSFK--------------------QIDSDGPIIKIAVSPNGKFIALFTD-SGNLWVVSSDFSEKLCEFDTDSKSPPKQ 264 (410)
T ss_pred Eccccc--------------------cccCCCCeEEEEECCCCCEEEEEEC-CCCEEEEECcccceeEEeecCcCCCCcE
Confidence 211100 0112457999999999999998887 899999987666666666543 334556
Q ss_pred EEEccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccc
Q psy9598 770 LESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRP 849 (1915)
Q Consensus 770 l~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~ 849 (1915)
+.|+. +..++++- ...|.+.... .. .+.|.-++..+++.-.|| |+|+.-...+.+
T Consensus 265 ~~WCG-~dav~l~~--~~~l~lvg~~------------------~~---~~~~~~~~~~~l~~E~DG-~riit~~~~~~l 319 (410)
T PF04841_consen 265 MAWCG-NDAVVLSW--EDELLLVGPD------------------GD---SISFWYDGPVILVSEIDG-VRIITSTSHEFL 319 (410)
T ss_pred EEEEC-CCcEEEEe--CCEEEEECCC------------------CC---ceEEeccCceEEeccCCc-eEEEeCCceEEE
Confidence 66654 22222222 2233332211 11 134444555666666666 788877776666
Q ss_pred ccCCC
Q psy9598 850 QNIPR 854 (1915)
Q Consensus 850 ~~l~~ 854 (1915)
..+|.
T Consensus 320 ~~Vp~ 324 (410)
T PF04841_consen 320 QRVPD 324 (410)
T ss_pred EECCH
Confidence 66665
No 432
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.73 E-value=0.00091 Score=83.51 Aligned_cols=307 Identities=13% Similarity=0.123 Sum_probs=143.8
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC---------
Q psy9598 478 AVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ--------- 548 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~--------- 548 (1915)
.|++|.|++...-|++|...|.|.||.+...+... ..-...-..+.+.+- ...++.-.|-|+.
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~~------~~~~~~~~l~di~~r~~~~~~~ 74 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRRF------SLNNSPGKLTDISDRAPPSLKE 74 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE--------------------S--------GGGSS-SEEE-GGG--TT-SE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCcccccc------cccCCCcceEEehhhCCccccc
Confidence 58999999998999999999999999875432221 000011111121110 0011111222332
Q ss_pred CCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECC
Q psy9598 549 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSP 628 (1915)
Q Consensus 549 tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fsp 628 (1915)
...+...+....+.|++++.+.. .+++.|..+|++.|.|++....+....... ..........|+++.|+.
T Consensus 75 gf~P~~l~~~~~g~vtal~~S~i-----GFvaigy~~G~l~viD~RGPavI~~~~i~~----~~~~~~~~~~vt~ieF~v 145 (395)
T PF08596_consen 75 GFLPLTLLDAKQGPVTALKNSDI-----GFVAIGYESGSLVVIDLRGPAVIYNENIRE----SFLSKSSSSYVTSIEFSV 145 (395)
T ss_dssp EEEEEEEE---S-SEEEEEE-BT-----SEEEEEETTSEEEEEETTTTEEEEEEEGGG------T-SS----EEEEEEEE
T ss_pred ccCchhheeccCCcEeEEecCCC-----cEEEEEecCCcEEEEECCCCeEEeeccccc----cccccccccCeeEEEEEE
Confidence 12355566667899999999864 599999999999999998886655433332 111122346688888863
Q ss_pred -----CC---cEEEEEeCCCeEEEEEecCCCCCceeEEe----ccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q psy9598 629 -----GG---LFLATGSGDHHVRVYKMDGVDSPLGILEV----EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQ 696 (1915)
Q Consensus 629 -----dg---~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l----~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~ 696 (1915)
|+ -.|++|+..|.+.+|.+.-.........+ ..+.+.|.. |...+..++.
T Consensus 146 m~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~------------------I~~i~~~~G~ 207 (395)
T PF08596_consen 146 MTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILS------------------IIPINADTGE 207 (395)
T ss_dssp EE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----E------------------EEEEETTT--
T ss_pred EecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEE------------------EEEEECCCCC
Confidence 33 47889999999999988311100000000 011122211 1222333332
Q ss_pred eEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEcc--
Q psy9598 697 WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP-- 774 (1915)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp-- 774 (1915)
...... .... .......+ ..+++++ + +..++|+...+.+..+......-.+.++++-+
T Consensus 208 ~a~At~---------~~~~-~l~~g~~i--------~g~vVvv-S-e~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~ 267 (395)
T PF08596_consen 208 SALATI---------SAMQ-GLSKGISI--------PGYVVVV-S-ESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTI 267 (395)
T ss_dssp B-B-BH---------HHHH-GGGGT------------EEEEEE---SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE
T ss_pred cccCch---------hHhh-ccccCCCc--------CcEEEEE-c-ccceEEEeCCCCcccceeeccccccceEEEEeec
Confidence 110000 0000 00011111 1133333 3 67899999988887766552222233344421
Q ss_pred --CCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9598 775 --FDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843 (1915)
Q Consensus 775 --~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl 843 (1915)
..+..|++-..+|.|+++.+-.-+. +..+... .......+....|+++|..++..+.. .+.+|.+
T Consensus 268 ~~~~~~~Lv~l~~~G~i~i~SLP~Lke--i~~~~l~-~~~d~~~~~~ssis~~Gdi~~~~gps-E~~l~sv 334 (395)
T PF08596_consen 268 SRNGGYCLVCLFNNGSIRIYSLPSLKE--IKSVSLP-PPLDSRRLSSSSISRNGDIFYWTGPS-EIQLFSV 334 (395)
T ss_dssp -EEEEEEEEEEETTSEEEEEETTT--E--EEEEE-S-S---HHHHTT-EE-TTS-EEEE-SSS-EEEEEEE
T ss_pred ccCCceEEEEEECCCcEEEEECCCchH--hhcccCC-CccccccccccEECCCCCEEEEeCcc-cEEEEEE
Confidence 1466788889999999999987666 4444411 11122334566778899877766543 4444443
No 433
>KOG3617|consensus
Probab=97.73 E-value=0.00067 Score=85.31 Aligned_cols=109 Identities=20% Similarity=0.326 Sum_probs=79.6
Q ss_pred EEEEeccCccCCCcEEEEEe----CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC
Q psy9598 564 TGVNFCPLEVNGFNYLASTS----TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 639 (1915)
Q Consensus 564 ~sl~fsp~~~~d~~~L~sgs----~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D 639 (1915)
+-+.|+|.. .+|++++ ..|+|.||- .+|........ ...+++++|+|..-.|+.|-.-
T Consensus 19 ti~SWHPse----PlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-------------P~hatSLCWHpe~~vLa~gwe~ 80 (1416)
T KOG3617|consen 19 TISSWHPSE----PLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-------------PVHATSLCWHPEEFVLAQGWEM 80 (1416)
T ss_pred cccccCCCC----ceeEEEEecCCCCceEEEEe-cCCCCCccccc-------------ceehhhhccChHHHHHhhcccc
Confidence 445677755 4666655 457888883 34432111111 1346779999999899999999
Q ss_pred CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 640 HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 640 g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
|.+.+|.... ...-.....|..+|..+.||++|..|+++..-|.|.+|.+.
T Consensus 81 g~~~v~~~~~---~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 81 GVSDVQKTNT---TETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ceeEEEecCC---ceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 9999999732 22233446799999999999999999999999999999765
No 434
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.60 E-value=0.084 Score=69.17 Aligned_cols=308 Identities=12% Similarity=0.064 Sum_probs=164.0
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCC-CCEE---E-------EEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCS-GEIS---D-------IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL 556 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~-~~I~---~-------Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l 556 (1915)
+..|++++.++.|.-+|..+|+.+..+.... ..+. + +++ .+..|+.++.|+.|...|..+|+.+...
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 5577778888899999999999988765321 1111 1 122 2346777888999999999999988765
Q ss_pred ecCC-CCeEEEEeccCccCCCcEEEEEeC------CCeEEEEecccCccccceeccCccc-------------c------
Q psy9598 557 VGHQ-GIITGVNFCPLEVNGFNYLASTST------DGCIGFWKYKLDIDISKTVFHEPVM-------------F------ 610 (1915)
Q Consensus 557 ~~h~-~~V~sl~fsp~~~~d~~~L~sgs~------DgtI~iWDl~~~~~~~~~~~~~~~~-------------~------ 610 (1915)
.... ..-..+.-+|.- .+ ..+++++. +|.|..+|..+++.+.......... .
T Consensus 147 ~~~~~~~~~~~tssP~v-~~-g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~ 224 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLV-VK-GKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWP 224 (527)
T ss_pred ccccccccccccCCcEE-EC-CEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCC
Confidence 4211 000112222211 12 34555432 6899999999998765544321110 0
Q ss_pred ccccCCCCCce-EEEEECCCCcEEEEEeCC-----C-----------eEEEEEecCCCCCceeEEecc--CC-------C
Q psy9598 611 NERIRPGNAHI-LCSSFSPGGLFLATGSGD-----H-----------HVRVYKMDGVDSPLGILEVEE--HS-------D 664 (1915)
Q Consensus 611 ~~~~~~~~~~V-~~l~fspdg~~Lasgs~D-----g-----------~I~IwDl~~~~~~~~i~~l~~--h~-------~ 664 (1915)
......+.+.+ ..+++.+...+|..+..+ + .|.-.|+++ ....-.++. |. .
T Consensus 225 ~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~T---G~~~W~~Q~~~~D~wD~d~~~ 301 (527)
T TIGR03075 225 GDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDT---GKIKWHYQTTPHDEWDYDGVN 301 (527)
T ss_pred CCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcccc---CCEEEeeeCCCCCCccccCCC
Confidence 00011111222 245777776677766643 2 333444422 222222222 21 1
Q ss_pred CeeEEEEcCCCC---EEEEEeCCCcEEEEEccCCceEEeee-----------cccccCCCCccc------------cccc
Q psy9598 665 KVDSIQWSHSHL---RFVSGSRDGTALIWYYKCSQWRFIRL-----------DMNTCLPHTKET------------SDET 718 (1915)
Q Consensus 665 ~V~sl~fspdg~---~L~sgs~DG~I~IWDl~~~~~~~~~~-----------~~~~~~~~~~~~------------~~~~ 718 (1915)
...-+.+..+|. .++.+..+|.+.+.|-.+++.+.... ++....+..... ....
T Consensus 302 ~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~P 381 (527)
T TIGR03075 302 EMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCP 381 (527)
T ss_pred CcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECC
Confidence 111122224665 77899999999999999998642100 000000000000 0000
Q ss_pred cc--cccEEEEEECCCCCEEEEEEec--------------------------------CCeEEEEECCCCceEEEeeCCC
Q psy9598 719 NK--KIKVTMVAWDASDRWVITAINF--------------------------------NFQIKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 719 ~~--~~~V~~va~spdg~~L~t~s~~--------------------------------Dg~I~vwD~~tg~~i~~l~gH~ 764 (1915)
+. ...-..++++|...++++.... -|.|.-||+.+|+.+-......
T Consensus 382 g~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~ 461 (527)
T TIGR03075 382 GFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDF 461 (527)
T ss_pred CCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCC
Confidence 00 0011235666666555544331 2457778888888777665322
Q ss_pred CCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeee
Q psy9598 765 NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH 806 (1915)
Q Consensus 765 ~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~ 806 (1915)
....+... - .+.+++.++.||.++.+|..+|+. +-.+.
T Consensus 462 p~~~~~l~-t-~g~lvf~g~~~G~l~a~D~~TGe~--lw~~~ 499 (527)
T TIGR03075 462 PLWGGVLA-T-AGDLVFYGTLEGYFKAFDAKTGEE--LWKFK 499 (527)
T ss_pred CCCCcceE-E-CCcEEEEECCCCeEEEEECCCCCE--eEEEe
Confidence 11111111 1 356777788899999999999998 55544
No 435
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.58 E-value=0.049 Score=65.23 Aligned_cols=249 Identities=12% Similarity=0.073 Sum_probs=143.1
Q ss_pred EEEcCCCCEEEEEEC----------CCcEEEEECCCCcEEEEEeCCC---C----CEEEEEEeCCCCEEEEEeC--CCcE
Q psy9598 482 VLFDKLGEVIVTGAD----------DLLIKLWRARDGKLLATLRGCS---G----EISDIAIDNRNILLAAGTV--DKTI 542 (1915)
Q Consensus 482 vafspdg~~LaTGs~----------Dg~I~IWd~~tg~~~~~l~gH~---~----~I~~Lafspdg~~LaSgs~--DgtI 542 (1915)
+.++|+|+.+++++. .-.|.+||..|......+.-.. . ....++++.||++++.... -.+|
T Consensus 41 ~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SV 120 (342)
T PF06433_consen 41 VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSV 120 (342)
T ss_dssp EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEE
T ss_pred eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeE
Confidence 567899999887542 3379999999998877553221 1 2234678899998877643 4579
Q ss_pred EEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCce-
Q psy9598 543 RIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI- 621 (1915)
Q Consensus 543 rVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V- 621 (1915)
.|-|+...+.+..+.-. + |....|.+ ..-|.+-|.||++.-..+.......... . ..+......+
T Consensus 121 tVVDl~~~kvv~ei~~P-G---C~~iyP~~---~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~-t------~~F~~~~dp~f 186 (342)
T PF06433_consen 121 TVVDLAAKKVVGEIDTP-G---CWLIYPSG---NRGFSMLCGDGSLLTVTLDADGKEAQKS-T------KVFDPDDDPLF 186 (342)
T ss_dssp EEEETTTTEEEEEEEGT-S---EEEEEEEE---TTEEEEEETTSCEEEEEETSTSSEEEEE-E------EESSTTTS-B-
T ss_pred EEEECCCCceeeeecCC-C---EEEEEecC---CCceEEEecCCceEEEEECCCCCEeEee-c------cccCCCCcccc
Confidence 99999988888776532 1 33334533 2568899999999999888443222111 0 1111222222
Q ss_pred EEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEecc----------CCCCeeEEEEcCCCCEEEEEeC--------
Q psy9598 622 LCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE----------HSDKVDSIQWSHSHLRFVSGSR-------- 683 (1915)
Q Consensus 622 ~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~----------h~~~V~sl~fspdg~~L~sgs~-------- 683 (1915)
..-+++..+..++.-+.+|.|+-.|+.+.. ......+.- ..+.-.-+++++...+|++--.
T Consensus 187 ~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~-~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHK 265 (342)
T PF06433_consen 187 EHPAYSRDGGRLYFVSYEGNVYSADLSGDS-AKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHK 265 (342)
T ss_dssp S--EEETTTTEEEEEBTTSEEEEEEETTSS-EEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TT
T ss_pred cccceECCCCeEEEEecCCEEEEEeccCCc-ccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCcc
Confidence 223444455555557788999888884432 222222211 1123345677766555554321
Q ss_pred CCc--EEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCE-EEEEEecCCeEEEEECCCCceEEEe
Q psy9598 684 DGT--ALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW-VITAINFNFQIKIWDAFNGDLVQVL 760 (1915)
Q Consensus 684 DG~--I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~-L~t~s~~Dg~I~vwD~~tg~~i~~l 760 (1915)
|+. |-++|+.+++.+... .....+.+|..+.+..- |++.+..++.|.|||..+|++++.+
T Consensus 266 dpgteVWv~D~~t~krv~Ri-----------------~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~ 328 (342)
T PF06433_consen 266 DPGTEVWVYDLKTHKRVARI-----------------PLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSI 328 (342)
T ss_dssp S-EEEEEEEETTTTEEEEEE-----------------EEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE
T ss_pred CCceEEEEEECCCCeEEEEE-----------------eCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeeh
Confidence 222 555566666644321 12235668999988774 4444444789999999999999988
Q ss_pred eC
Q psy9598 761 KG 762 (1915)
Q Consensus 761 ~g 762 (1915)
.+
T Consensus 329 ~~ 330 (342)
T PF06433_consen 329 EQ 330 (342)
T ss_dssp --
T ss_pred hc
Confidence 74
No 436
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.53 E-value=0.026 Score=73.61 Aligned_cols=294 Identities=10% Similarity=-0.014 Sum_probs=152.6
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeE-E--EEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccC
Q psy9598 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIIT-G--VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606 (1915)
Q Consensus 530 g~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~-s--l~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~ 606 (1915)
+..|+.++.++.|...|..+|+.+..+........ + +.-.+....+...++.++.+|.|..+|..+++.+.......
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~ 140 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNND 140 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence 34566677789999999999988776643322000 0 00000000122678888899999999999998766554432
Q ss_pred ccccccccCCCCCceE-EEEECCCCcEEEEEe---------CCCeEEEEEecCCCCCceeEEeccC--------------
Q psy9598 607 PVMFNERIRPGNAHIL-CSSFSPGGLFLATGS---------GDHHVRVYKMDGVDSPLGILEVEEH-------------- 662 (1915)
Q Consensus 607 ~~~~~~~~~~~~~~V~-~l~fspdg~~Lasgs---------~Dg~I~IwDl~~~~~~~~i~~l~~h-------------- 662 (1915)
... ....+. +..+. +..+++|+ .+|.|..+|..+.. .+......
T Consensus 141 ~~~-------~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~---~~W~~~~~~~~~~~~~~~~~~~ 208 (488)
T cd00216 141 QVP-------PGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGK---LLWRFYTTEPDPNAFPTWGPDR 208 (488)
T ss_pred CcC-------cceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCc---eeeEeeccCCCcCCCCCCCCCc
Confidence 110 000000 01111 13344443 35677777763322 22221110
Q ss_pred -----C-CCe-eEEEEcCCCCEEEEEeCCC------------------cEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 663 -----S-DKV-DSIQWSHSHLRFVSGSRDG------------------TALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 663 -----~-~~V-~sl~fspdg~~L~sgs~DG------------------~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
. ..| .+.++.+.+.+++.++.++ .|.-+|+.+++.+-......... ...
T Consensus 209 ~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~------~~~ 282 (488)
T cd00216 209 QMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDL------WDY 282 (488)
T ss_pred ceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCC------ccc
Confidence 0 111 1234555566788887665 68888988888654331110000 000
Q ss_pred ccccc-cEEEEEECCCCC---EEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEE----------
Q psy9598 718 TNKKI-KVTMVAWDASDR---WVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA---------- 783 (1915)
Q Consensus 718 ~~~~~-~V~~va~spdg~---~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSg---------- 783 (1915)
..... .+..+. .-+|. .+++++. +|.+..+|..+|+.+....... ..++.+| ..++.+
T Consensus 283 ~~~s~p~~~~~~-~~~g~~~~~V~~g~~-~G~l~ald~~tG~~~W~~~~~~---~~~~~~~---~~vyv~~~~~~~~~~~ 354 (488)
T cd00216 283 DGPNQPSLADIK-PKDGKPVPAIVHAPK-NGFFYVLDRTTGKLISARPEVE---QPMAYDP---GLVYLGAFHIPLGLPP 354 (488)
T ss_pred ccCCCCeEEecc-ccCCCeeEEEEEECC-CceEEEEECCCCcEeeEeEeec---cccccCC---ceEEEccccccccCcc
Confidence 00111 111111 12333 4555555 8999999999999887654211 1122333 222221
Q ss_pred --------ecCceEEEEECCCCccccceeeeeeecCCCC----cceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccccc
Q psy9598 784 --------GHDGLIIIWDILSSKQRGYKWFHNIVEGQGE----GALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQN 851 (1915)
Q Consensus 784 --------s~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~----~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~~~~~~ 851 (1915)
..+|.|.-.|+.+++. +-..... ..... ...........+..|++++.+|.|+.+|..+|+.+-.
T Consensus 355 ~~~~~~~~~~~G~l~AlD~~tG~~--~W~~~~~-~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~ 431 (488)
T cd00216 355 QKKKRCKKPGKGGLAALDPKTGKV--VWEKREG-TIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWK 431 (488)
T ss_pred cccCCCCCCCceEEEEEeCCCCcE--eeEeeCC-ccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeE
Confidence 2467888888888877 3333211 00000 1111111112567888899999999999999987655
Q ss_pred C
Q psy9598 852 I 852 (1915)
Q Consensus 852 l 852 (1915)
.
T Consensus 432 ~ 432 (488)
T cd00216 432 F 432 (488)
T ss_pred E
Confidence 4
No 437
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.51 E-value=0.024 Score=72.82 Aligned_cols=240 Identities=9% Similarity=0.072 Sum_probs=132.3
Q ss_pred CCcEEEEEeC-CCeEEEEecccCccccceeccC---ccccccccCCCCCceEE-----EEECCCCcEEEE-EeCCCeEEE
Q psy9598 575 GFNYLASTST-DGCIGFWKYKLDIDISKTVFHE---PVMFNERIRPGNAHILC-----SSFSPGGLFLAT-GSGDHHVRV 644 (1915)
Q Consensus 575 d~~~L~sgs~-DgtI~iWDl~~~~~~~~~~~~~---~~~~~~~~~~~~~~V~~-----l~fspdg~~Las-gs~Dg~I~I 644 (1915)
+|++|+.-.. ++.|-..+++..++...+.... .+...-...+.+..|.| +=++++|..+.. .-..+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 5677777663 4555555555544332222221 11111111244455554 335667765533 333567777
Q ss_pred EEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC----cEEEEEccCCceEEeeecccccCCCCccccccccc
Q psy9598 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG----TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK 720 (1915)
Q Consensus 645 wDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG----~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (1915)
.|..+. .....+.- .+....++++++|.++++++.+. ++..-+.....+.... .
T Consensus 220 ID~etm---eV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvf------------------n 277 (635)
T PRK02888 220 VDAETM---EVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVF------------------N 277 (635)
T ss_pred EECccc---eEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEE------------------c
Confidence 777422 22222221 22446678999999988876422 2222221111110000 0
Q ss_pred cccEEEEEECCCCCEEEEEEecCCeEEEEECCC-----CceEEEeeCCCCCeEEEEEccCCCCEEEEEe-cCceEEEEEC
Q psy9598 721 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFN-----GDLVQVLKGHTNEVFVLESHPFDSRVLLSAG-HDGLIIIWDI 794 (1915)
Q Consensus 721 ~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t-----g~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs-~DG~I~IWdl 794 (1915)
... ...+.++|++...+ ++.|.|+|..+ ...+..+. -......|.++| |+.++++++ .+.+|.|.|+
T Consensus 278 i~~--iea~vkdGK~~~V~---gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSP-DGkylyVanklS~tVSVIDv 350 (635)
T PRK02888 278 IAR--IEEAVKAGKFKTIG---GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSP-DGKYFIANGKLSPTVTVIDV 350 (635)
T ss_pred hHH--HHHhhhCCCEEEEC---CCEEEEEECCccccCCcceEEEEE-CCCCccceEECC-CCCEEEEeCCCCCcEEEEEC
Confidence 000 01334578877763 67899999988 34555554 334468899999 888776655 5899999999
Q ss_pred CCCccc------cceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 795 LSSKQR------GYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 795 ~s~~~~------~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
.+.+.. ....+..-+. .+.+ ....+|.++|....+...|..|..|++..
T Consensus 351 ~k~k~~~~~~~~~~~~vvaeve-vGlG-PLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 351 RKLDDLFDGKIKPRDAVVAEPE-LGLG-PLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hhhhhhhhccCCccceEEEeec-cCCC-cceEEECCCCCEEEeEeecceeEEEehHH
Confidence 875420 0001110011 1223 34578999999888889999999999986
No 438
>KOG1008|consensus
Probab=97.49 E-value=5e-05 Score=93.36 Aligned_cols=210 Identities=18% Similarity=0.251 Sum_probs=131.5
Q ss_pred CceEEEEECCCC--cEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCC-CCEEEEEe----CCCcEEEEE
Q psy9598 619 AHILCSSFSPGG--LFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS-HLRFVSGS----RDGTALIWY 691 (1915)
Q Consensus 619 ~~V~~l~fspdg--~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspd-g~~L~sgs----~DG~I~IWD 691 (1915)
..+.|++++-+. ..+++|..+|.|-+-.++.... .......+|....++++|++- .+.||.|- .|..+.|||
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hd-Ss~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHD-SSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCccc-ccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 456777776543 4788999999999998853322 223345678889999999875 34566653 456799999
Q ss_pred ccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEE
Q psy9598 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE 771 (1915)
Q Consensus 692 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~ 771 (1915)
+.+.-.. |........ +......++||..+.+.|++|.. ...+.++|++.. +.......+..|..+.
T Consensus 136 i~s~ltv----------Pke~~~fs~-~~l~gqns~cwlrd~klvlaGm~-sr~~~ifdlRqs-~~~~~svnTk~vqG~t 202 (783)
T KOG1008|consen 136 INSLLTV----------PKESPLFSS-STLDGQNSVCWLRDTKLVLAGMT-SRSVHIFDLRQS-LDSVSSVNTKYVQGIT 202 (783)
T ss_pred cccccCC----------Ccccccccc-ccccCccccccccCcchhhcccc-cchhhhhhhhhh-hhhhhhhhhhhcccce
Confidence 9876311 111111111 23344568999988888888887 789999998721 1111112233466677
Q ss_pred EccCCCCEEEEEecCceEEEEEC-CCCccccceeeeeeecCCCCcceEEEEEcCC--CCEEEEEeCCCeEEEEeCCC
Q psy9598 772 SHPFDSRVLLSAGHDGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPD--GTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 772 ~sp~dg~~LaSgs~DG~I~IWdl-~s~~~~~~~~~~~~~~~~~~~~V~~vafSpd--g~~Lasg~~dG~I~Iwdl~s 845 (1915)
+.|..++++++-. ||.|.+||. ..-+. .+..+. .-.......+..++|+|. |.+.+..-..++|+++++..
T Consensus 203 Vdp~~~nY~cs~~-dg~iAiwD~~rnien-pl~~i~-~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 203 VDPFSPNYFCSNS-DGDIAIWDTYRNIEN-PLQIIL-RNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred ecCCCCCceeccc-cCceeeccchhhhcc-HHHHHh-hCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 8887788888766 999999994 22111 011111 000111235899999994 44444445668899998763
No 439
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.40 E-value=0.16 Score=62.03 Aligned_cols=303 Identities=14% Similarity=0.126 Sum_probs=128.8
Q ss_pred ECCCCcEEEEEeCCCCCEEEE-----EEeCCCCEEEEEe-CCC--cEEEEECCCCceEEEeecCCCCeEEEEeccCccCC
Q psy9598 504 RARDGKLLATLRGCSGEISDI-----AIDNRNILLAAGT-VDK--TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575 (1915)
Q Consensus 504 d~~tg~~~~~l~gH~~~I~~L-----afspdg~~LaSgs-~Dg--tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d 575 (1915)
|..||..+..|..+.+....+ +|.++|+.|+-++ .|| .+.+.|+.+++..+.-.+-........++|.
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~---- 91 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPD---- 91 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TT----
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecC----
Confidence 677888888886554433333 5677886555444 454 5677788888766655443333335556663
Q ss_pred CcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEE--CCCCcEEEEEeC---------------
Q psy9598 576 FNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF--SPGGLFLATGSG--------------- 638 (1915)
Q Consensus 576 ~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~f--spdg~~Lasgs~--------------- 638 (1915)
.+.|+.......|.-.|+.+.+......+. ...+-...| +.++..++..-.
T Consensus 92 ~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p------------~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~ 159 (386)
T PF14583_consen 92 DRALYYVKNGRSLRRVDLDTLEERVVYEVP------------DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFR 159 (386)
T ss_dssp SSEEEEEETTTEEEEEETTT--EEEEEE--------------TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHH
T ss_pred CCeEEEEECCCeEEEEECCcCcEEEEEECC------------cccccccceeeCCCccEEEEEEEeehhccCccccHHHH
Confidence 366665656667888888887532222222 122222333 334444332110
Q ss_pred -------CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEEccCCceEEeeecccc
Q psy9598 639 -------DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG-----TALIWYYKCSQWRFIRLDMNT 706 (1915)
Q Consensus 639 -------Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG-----~I~IWDl~~~~~~~~~~~~~~ 706 (1915)
...|...|+.+ . ....+..-...+..+.|+|....+++=|..| .-+||-+.+.......
T Consensus 160 e~~~a~p~~~i~~idl~t---G-~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~----- 230 (386)
T PF14583_consen 160 EFYEARPHCRIFTIDLKT---G-ERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKK----- 230 (386)
T ss_dssp HHHHC---EEEEEEETTT------EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EE-----
T ss_pred HHHhhCCCceEEEEECCC---C-ceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCccee-----
Confidence 11233333321 1 1223333456678889999877666655443 2477866543211100
Q ss_pred cCCCCccccccccccccEEEEEECCCCCEEEEEEe----cCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEE
Q psy9598 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN----FNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 707 ~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~----~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaS 782 (1915)
.. .......+..=-|.+||..|..-+. .+..|.-+|+.++........ ....-+-.++ ++.++|-
T Consensus 231 -------v~-~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~--p~~~H~~ss~-Dg~L~vG 299 (386)
T PF14583_consen 231 -------VH-RRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEM--PWCSHFMSSP-DGKLFVG 299 (386)
T ss_dssp -------SS----TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE---SEEEEEE-T-TSSEEEE
T ss_pred -------ee-cCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeC--CceeeeEEcC-CCCEEEe
Confidence 00 0112345566679999988765332 133577778888765433222 1233444456 7887765
Q ss_pred EecCc----------------eEEEEECCCCccccceeeee---eecCCCCcceEEEEEcCCCCEEEEE-eCCCeEEEEe
Q psy9598 783 AGHDG----------------LIIIWDILSSKQRGYKWFHN---IVEGQGEGALFDGKWSPDGTTCALT-DSYGHLLVYG 842 (1915)
Q Consensus 783 gs~DG----------------~I~IWdl~s~~~~~~~~~~~---~~~~~~~~~V~~vafSpdg~~Lasg-~~dG~I~Iwd 842 (1915)
=|.|. -|+|+++..+....+..... .+.+.....=....|+|||++|+.. +..|...||-
T Consensus 300 DG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~ 379 (386)
T PF14583_consen 300 DGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYL 379 (386)
T ss_dssp EE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEE
T ss_pred cCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEE
Confidence 44442 45556666554311111100 0111111112346777777766554 3455555553
No 440
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.38 E-value=0.087 Score=64.32 Aligned_cols=275 Identities=13% Similarity=0.080 Sum_probs=123.5
Q ss_pred EEcCCCCEEEEEEC-CC--cEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecC
Q psy9598 483 LFDKLGEVIVTGAD-DL--LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 559 (1915)
Q Consensus 483 afspdg~~LaTGs~-Dg--~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h 559 (1915)
+|.++|+.|+.++. || .+.+.|+.+++..+.-.+-........++++++.|+-......|+--|+.+.+....+...
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 46788866665554 55 5666688888766544433233335667788888876666678999999998877666666
Q ss_pred CCCeEEEEeccCccCCCcEEEEEeC---C-------------------CeEEEEecccCccccceeccCccccccccCCC
Q psy9598 560 QGIITGVNFCPLEVNGFNYLASTST---D-------------------GCIGFWKYKLDIDISKTVFHEPVMFNERIRPG 617 (1915)
Q Consensus 560 ~~~V~sl~fsp~~~~d~~~L~sgs~---D-------------------gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1915)
...+-...|..+. +...++..-. | ..|...|+.++.. ..+...
T Consensus 122 ~~~~g~gt~v~n~--d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~-------------~~v~~~ 186 (386)
T PF14583_consen 122 DDWKGYGTWVANS--DCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGER-------------KVVFED 186 (386)
T ss_dssp TTEEEEEEEEE-T--TSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--E-------------EEEEEE
T ss_pred cccccccceeeCC--CccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCce-------------eEEEec
Confidence 6666667775432 3333332211 0 1112222222211 011112
Q ss_pred CCceEEEEECCCCcEEEEEeCCC-----eEEEEEecCCCCCceeEEeccCCC--CeeEEEEcCCCCEEEEEe-----CCC
Q psy9598 618 NAHILCSSFSPGGLFLATGSGDH-----HVRVYKMDGVDSPLGILEVEEHSD--KVDSIQWSHSHLRFVSGS-----RDG 685 (1915)
Q Consensus 618 ~~~V~~l~fspdg~~Lasgs~Dg-----~I~IwDl~~~~~~~~i~~l~~h~~--~V~sl~fspdg~~L~sgs-----~DG 685 (1915)
...+.-+.|+|....+++=|..| .-+||-++...... ..+..|.. .+..=-|.++|..|+--+ .+.
T Consensus 187 ~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~--~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~ 264 (386)
T PF14583_consen 187 TDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNV--KKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDF 264 (386)
T ss_dssp SS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS-----EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--E
T ss_pred CccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcc--eeeecCCCCcccccccccCCCCEEEEEeecCCCCce
Confidence 34566788898655555443322 23778775433222 22222322 223334888888654322 233
Q ss_pred cEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC----------------eEEEE
Q psy9598 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF----------------QIKIW 749 (1915)
Q Consensus 686 ~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg----------------~I~vw 749 (1915)
.|.-+|+.++...... .......+..+++|.+++.=++ |. .|+++
T Consensus 265 ~i~~~d~~t~~~~~~~------------------~~p~~~H~~ss~Dg~L~vGDG~-d~p~~v~~~~~~~~~~~p~i~~~ 325 (386)
T PF14583_consen 265 WIAGYDPDTGERRRLM------------------EMPWCSHFMSSPDGKLFVGDGG-DAPVDVADAGGYKIENDPWIYLF 325 (386)
T ss_dssp EEEEE-TTT--EEEEE------------------EE-SEEEEEE-TTSSEEEEEE--------------------EEEEE
T ss_pred EEEeeCCCCCCceEEE------------------eCCceeeeEEcCCCCEEEecCC-CCCccccccccceecCCcEEEEe
Confidence 4555566655422110 1112345666788877664443 32 56678
Q ss_pred ECCCCceEEE---------eeCCCC-CeEEEEEccCCCCEE-EEEecCceEEEEEC
Q psy9598 750 DAFNGDLVQV---------LKGHTN-EVFVLESHPFDSRVL-LSAGHDGLIIIWDI 794 (1915)
Q Consensus 750 D~~tg~~i~~---------l~gH~~-~V~sl~~sp~dg~~L-aSgs~DG~I~IWdl 794 (1915)
++..+..... +.+|.. .---..|+| |++.| ++....|...||-+
T Consensus 326 ~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSP-Dgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 326 DVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSP-DGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp ETTTTEEEEEEE-------BTTBSSTT----EE-T-TSSEEEEEE-TTSS-EEEEE
T ss_pred ccccCceeeeeeccCcceeecCCCccCCCCCccCC-CCCEEEEECCCCCCccEEEE
Confidence 8876654321 112111 123467999 66654 45556777666644
No 441
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.33 E-value=0.19 Score=63.94 Aligned_cols=197 Identities=13% Similarity=0.056 Sum_probs=102.1
Q ss_pred EEEcCCCCEEEEEECC----------C-cEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q psy9598 482 VLFDKLGEVIVTGADD----------L-LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 550 (1915)
Q Consensus 482 vafspdg~~LaTGs~D----------g-~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg 550 (1915)
++.+|.|..||....+ . .|.||+. .|+++.++.--.+.|.++.|+.+.. |+.-..||+++++|+. |
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~-G 110 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLF-G 110 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECC-CCCEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCC-C
Confidence 4455555555555433 2 4999996 7778877654448999999998655 5555689999999986 3
Q ss_pred ceEEEee-------cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEE
Q psy9598 551 APISVLV-------GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 623 (1915)
Q Consensus 551 ~~~~~l~-------~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 623 (1915)
.....+. -....|..+.+.. +| .++. ..++.|.+..-.............+.. .............
T Consensus 111 ~~~fsl~~~i~~~~v~e~~i~~~~~~~----~G-ivvL-t~~~~~~~v~n~~~~~~~~~~~~~p~~-~~~~~~~~~~~~i 183 (410)
T PF04841_consen 111 EFQFSLGEEIEEEKVLECRIFAIWFYK----NG-IVVL-TGNNRFYVVNNIDEPVKLRRLPEIPGL-WTKFHWWPSWTVI 183 (410)
T ss_pred ceeechhhhccccCcccccccccccCC----CC-EEEE-CCCCeEEEEeCccccchhhccccCCCc-ccccccccccccc
Confidence 3311111 1111122222221 22 2222 333444333211111000000010110 0001011111011
Q ss_pred EEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q psy9598 624 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 624 l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~ 695 (1915)
..++.+....+....++.|.+.+-... .. + ...+++..|++||+|++++.-..+|.+.|....-.
T Consensus 184 ~~l~~~~~~~i~~~~g~~i~~i~~~~~---~~---i-~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~ 248 (410)
T PF04841_consen 184 PLLSSDRVVEILLANGETIYIIDENSF---KQ---I-DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFS 248 (410)
T ss_pred eEeecCcceEEEEecCCEEEEEEcccc---cc---c-cCCCCeEEEEECCCCCEEEEEECCCCEEEEECccc
Confidence 334555555555555666664443111 00 1 13468999999999999999999999888865433
No 442
>KOG1897|consensus
Probab=97.32 E-value=0.39 Score=63.41 Aligned_cols=322 Identities=16% Similarity=0.137 Sum_probs=160.6
Q ss_pred EcCCCCEEEEEECCCcEEEEECC-CCcEEE------EEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceE---
Q psy9598 484 FDKLGEVIVTGADDLLIKLWRAR-DGKLLA------TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPI--- 553 (1915)
Q Consensus 484 fspdg~~LaTGs~Dg~I~IWd~~-tg~~~~------~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~--- 553 (1915)
.+.+|.+.+.|..+|.+...-+. +++... .+-|..+-..||..-++| +|++||.-|.=.+-.+.+-.-.
T Consensus 265 v~~~~~~yLl~d~~G~Lf~l~l~~~~e~~s~~~lkve~lge~siassi~~L~ng-~lFvGS~~gdSqLi~L~~e~d~gsy 343 (1096)
T KOG1897|consen 265 VDLQGSRYLLGDEDGMLFKLLLSHTGETVSGLDLKVEYLGETSIASSINYLDNG-VLFVGSRFGDSQLIKLNTEPDVGSY 343 (1096)
T ss_pred ccCCccEEEEecCCCcEEEEEeecccccccceEEEEEecCCcchhhhhhcccCc-eEEEeccCCceeeEEccccCCCCch
Confidence 46678888888888887665444 443222 223455556677766665 7888887666566666542221
Q ss_pred ----EEeecCCCCeEEEEeccCccCCCcEEEEEe---CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEE-
Q psy9598 554 ----SVLVGHQGIITGVNFCPLEVNGFNYLASTS---TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS- 625 (1915)
Q Consensus 554 ----~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs---~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~- 625 (1915)
.++ ..-++|..++...........+++|+ .||++++..-.-+ +...... . .++-..++.+.
T Consensus 344 ~~ilet~-~NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSLRiiRngi~--I~e~A~i-------~-l~Gikg~w~lk~ 412 (1096)
T KOG1897|consen 344 VVILETF-VNLGPIVDMCVVDLDRQGQGQIVTCSGAFKDGSLRIIRNGIG--IDELASI-------D-LPGIKGMWSLKS 412 (1096)
T ss_pred hhhhhhc-ccccceeeEEEEeccccCCceEEEEeCCCCCCcEEEEecccc--cceeeEe-------e-cCCccceeEeec
Confidence 122 23468888877654322345566655 5899999753322 1111100 0 11223455555
Q ss_pred -ECCC-CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEccCCceEEeee
Q psy9598 626 -FSPG-GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH-SHLRFVSGSRDGTALIWYYKCSQWRFIRL 702 (1915)
Q Consensus 626 -fspd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp-dg~~L~sgs~DG~I~IWDl~~~~~~~~~~ 702 (1915)
+++. ..+|+.+-.+ .-++..+... .......+.......+..|. .|+.|+=.. ...|++++-. +.
T Consensus 413 ~v~~~~d~ylvlsf~~-eTrvl~i~~e---~ee~~~~gf~~~~~Tif~S~i~g~~lvQvT-s~~iRl~ss~-~~------ 480 (1096)
T KOG1897|consen 413 MVDENYDNYLVLSFIS-ETRVLNISEE---VEETEDPGFSTDEQTIFCSTINGNQLVQVT-SNSIRLVSSA-GL------ 480 (1096)
T ss_pred cccccCCcEEEEEecc-ceEEEEEccc---eEEeccccccccCceEEEEccCCceEEEEe-cccEEEEcch-hh------
Confidence 3332 1245544333 3445555211 11111122222222222111 111211111 1123333321 00
Q ss_pred cccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-CCCCCeEEEEEccC--CCC-
Q psy9598 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-GHTNEVFVLESHPF--DSR- 778 (1915)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-gH~~~V~sl~~sp~--dg~- 778 (1915)
...-.....++....+.+...++.+++ ++.+...++..+.+...-+ .-...|.|+.++|. +.+
T Consensus 481 ------------~~~W~~p~~~ti~~~~~n~sqVvvA~~-~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~ 547 (1096)
T KOG1897|consen 481 ------------RSEWRPPGKITIGVVSANASQVVVAGG-GLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNK 547 (1096)
T ss_pred ------------hhcccCCCceEEEEEeecceEEEEecC-ccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCc
Confidence 000012233444455555556777766 6777777776555222211 22457999999974 233
Q ss_pred --EEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9598 779 --VLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLG 844 (1915)
Q Consensus 779 --~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~ 844 (1915)
+++.|.++..+.+--....-. +......-...-...|.-.+|--|+.+|.++..||.+.-|.+.
T Consensus 548 s~~~aVG~Ws~~~~~l~~~pd~~--~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d 613 (1096)
T KOG1897|consen 548 SRLLAVGLWSDISMILTFLPDLI--LITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLD 613 (1096)
T ss_pred ceEEEEEeecceEEEEEECCCcc--eeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEE
Confidence 888898877666544322222 1111100001112345666777789999999999999766554
No 443
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.27 E-value=0.24 Score=62.49 Aligned_cols=266 Identities=9% Similarity=0.049 Sum_probs=160.9
Q ss_pred EEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcE
Q psy9598 500 IKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGT-VDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNY 578 (1915)
Q Consensus 500 I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs-~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~ 578 (1915)
+.+++..+......+.-+. ....+...+++..+.... ....+.+.+............-...-.++++++.+ ...
T Consensus 13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~---~~v 88 (381)
T COG3391 13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAG---NKV 88 (381)
T ss_pred eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCC---CeE
Confidence 6666666665555554333 456677788875443332 22245555544222111111111333566777643 346
Q ss_pred EEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC---CCeEEEEEecCCCCCce
Q psy9598 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG---DHHVRVYKMDGVDSPLG 655 (1915)
Q Consensus 579 L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~---Dg~I~IwDl~~~~~~~~ 655 (1915)
+++...++.|.+.|..+.......... .....+++++++..+.++.. ++.+.+.|.. ....
T Consensus 89 yv~~~~~~~v~vid~~~~~~~~~~~vG-------------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~---t~~~ 152 (381)
T COG3391 89 YVTTGDSNTVSVIDTATNTVLGSIPVG-------------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA---TNKV 152 (381)
T ss_pred EEecCCCCeEEEEcCcccceeeEeeec-------------cCCceEEECCCCCEEEEEecccCCceEEEEeCC---CCeE
Confidence 666667789999996665443333322 24567899999987777665 5777777763 2223
Q ss_pred eEEeccCCCCeeEEEEcCCCCEEEEEe-CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCC
Q psy9598 656 ILEVEEHSDKVDSIQWSHSHLRFVSGS-RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR 734 (1915)
Q Consensus 656 i~~l~~h~~~V~sl~fspdg~~L~sgs-~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~ 734 (1915)
+........+ ..++++|+|..++.+. .++.|.+.|........ .. ..........-..+.++++|.
T Consensus 153 ~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~-----------~~~~~~~~~~P~~i~v~~~g~ 219 (381)
T COG3391 153 TATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GS-----------VGSLVGVGTGPAGIAVDPDGN 219 (381)
T ss_pred EEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cc-----------cccccccCCCCceEEECCCCC
Confidence 3333222234 8899999999666554 78999999976654221 00 000111223345688999999
Q ss_pred EEEEEEecC--CeEEEEECCCCceEEE-eeCCCCCeEEEEEccCCCCEEEEEe-cCceEEEEECCCCcc
Q psy9598 735 WVITAINFN--FQIKIWDAFNGDLVQV-LKGHTNEVFVLESHPFDSRVLLSAG-HDGLIIIWDILSSKQ 799 (1915)
Q Consensus 735 ~L~t~s~~D--g~I~vwD~~tg~~i~~-l~gH~~~V~sl~~sp~dg~~LaSgs-~DG~I~IWdl~s~~~ 799 (1915)
++++....+ +.+.+.|..++..... +..-......+.++| ++..+.+.. ..+.|.+-|..+...
T Consensus 220 ~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p-~g~~~yv~~~~~~~V~vid~~~~~v 287 (381)
T COG3391 220 RVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDP-AGKAAYVANSQGGTVSVIDGATDRV 287 (381)
T ss_pred EEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECC-CCCEEEEEecCCCeEEEEeCCCCce
Confidence 888877634 5899999988877665 221111456788899 888777774 447888888877665
No 444
>KOG2276|consensus
Probab=97.22 E-value=9e-05 Score=87.33 Aligned_cols=76 Identities=20% Similarity=0.204 Sum_probs=63.7
Q ss_pred CccceeecccCC-CCCcCCCCcccC-CCCCCCCCCCcccccCCCCCCC-----------CCccccc-ccCCCCCceeeec
Q psy9598 871 LFEPTYDEVTNL-PPHLMPPPFLVD-LNGTPYPPEVQRLVPGRENADD-----------TELLPDI-TTNDDGHVEIVEG 936 (1915)
Q Consensus 871 ~~~~v~D~~t~~-~p~~~~~pfl~~-~~G~~ypp~~Q~lv~GR~~s~~-----------~~L~~~~-~~~~d~~~~~ieg 936 (1915)
.+|+|+|++++. .-.|.++||.++ .+|.+| |||.+|+ ..|.... +|-++ ++|++||
T Consensus 95 lvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~---------GRG~TDdkGPv~~wi~av~a~~~~g~~lpvn-v~f~~Eg 164 (473)
T KOG2276|consen 95 LVYGHLDVQPANLEDGWNTDPFTLTEDDGKLF---------GRGATDDKGPVLSWIHAVKALQQLGIDLPVN-VVFVFEG 164 (473)
T ss_pred EEEeeeeeeecCCCCCCcCCCeEEEEECCEEe---------ccCcCCCCccchHHHHHHHHHHHhCccccce-EEEEEEe
Confidence 569999999887 556999999999 889999 9999998 2233333 67777 9999999
Q ss_pred ccccCCCchhhccccccCCC
Q psy9598 937 SERNGERPVEVEGQRHYNDH 956 (1915)
Q Consensus 937 ~ee~gs~~~~~~~~~~~~~~ 956 (1915)
-||+||.++.+++.+.++-+
T Consensus 165 mEEsgS~~L~~l~~~~kD~~ 184 (473)
T KOG2276|consen 165 MEESGSEGLDELIEKEKDKF 184 (473)
T ss_pred chhccCccHHHHHHHHhhhh
Confidence 99999999999999988764
No 445
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.21 E-value=0.096 Score=62.90 Aligned_cols=238 Identities=16% Similarity=0.180 Sum_probs=127.9
Q ss_pred CCCCEEEEEECCCcEEEEECC-CCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEe--------
Q psy9598 486 KLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL-------- 556 (1915)
Q Consensus 486 pdg~~LaTGs~Dg~I~IWd~~-tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l-------- 556 (1915)
..++.|+.|+.+| |.++++. ......... ...|..|...++-+.|++-+ |+.|.++++.........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 4588999999998 8999983 333333332 33499999999877777765 599999999764443311
Q ss_pred ------ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCC
Q psy9598 557 ------VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 630 (1915)
Q Consensus 557 ------~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg 630 (1915)
......+...+... ...+...|+ +.....|.+|.+........... .+. .-...+.+++|. +
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~-~~~~~~~L~-va~kk~i~i~~~~~~~~~f~~~~------ke~--~lp~~~~~i~~~--~ 148 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNG-GHEGSRRLC-VAVKKKILIYEWNDPRNSFSKLL------KEI--SLPDPPSSIAFL--G 148 (275)
T ss_pred ccccccccccCCeeEEeecc-ccccceEEE-EEECCEEEEEEEECCccccccee------EEE--EcCCCcEEEEEe--C
Confidence 11223344433111 112334444 44445899988876421110000 000 112667888888 5
Q ss_pred cEEEEEeCCCeEEEEEecCCCCCceeEEecc----------CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEe
Q psy9598 631 LFLATGSGDHHVRVYKMDGVDSPLGILEVEE----------HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFI 700 (1915)
Q Consensus 631 ~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~----------h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~ 700 (1915)
+.|+.|..+ ...+.|+.+. ....+..... ...++..+.+. ++.+|++. |....+.|.......
T Consensus 149 ~~i~v~~~~-~f~~idl~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~~G~~~r-- 221 (275)
T PF00780_consen 149 NKICVGTSK-GFYLIDLNTG-SPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNKNGEPSR-- 221 (275)
T ss_pred CEEEEEeCC-ceEEEecCCC-CceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcCCCCcCc--
Confidence 567777655 4678888532 2222222111 11233333333 34555543 222222233221100
Q ss_pred eecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCC
Q psy9598 701 RLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~ 764 (1915)
.....-......+++ ...||++.+ ++.|.||++.++++++++.++.
T Consensus 222 --------------~~~i~W~~~p~~~~~--~~pyli~~~--~~~iEV~~~~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 222 --------------KSTIQWSSAPQSVAY--SSPYLIAFS--SNSIEVRSLETGELVQTIPLPN 267 (275)
T ss_pred --------------ccEEEcCCchhEEEE--ECCEEEEEC--CCEEEEEECcCCcEEEEEECCC
Confidence 000111223344554 345777765 4669999999999999987554
No 446
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.19 E-value=0.049 Score=68.02 Aligned_cols=89 Identities=13% Similarity=0.188 Sum_probs=61.8
Q ss_pred EEEEcCCCCEEEEEECCCcEEE---EECC-----CCcEEEEEeC---CC--CCEEEEEEe-----------CCCCEEEEE
Q psy9598 481 CVLFDKLGEVIVTGADDLLIKL---WRAR-----DGKLLATLRG---CS--GEISDIAID-----------NRNILLAAG 536 (1915)
Q Consensus 481 ~vafspdg~~LaTGs~Dg~I~I---Wd~~-----tg~~~~~l~g---H~--~~I~~Lafs-----------pdg~~LaSg 536 (1915)
+++.+|+|.+||.|..+..|.+ |+.. .+.......+ +. ..|+++.|- +|...++.|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 5678899999999988776655 6431 1222222221 21 467777663 346789999
Q ss_pred eCCCcEEEEECCCCceEEEeecCCCCeEEEEecc
Q psy9598 537 TVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570 (1915)
Q Consensus 537 s~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp 570 (1915)
..+|.|++|.. +|..+..-.-|..+|..|.+..
T Consensus 86 ~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 86 TSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred ecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence 99999999996 5777666666899999998865
No 447
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.16 E-value=0.13 Score=65.41 Aligned_cols=235 Identities=14% Similarity=0.150 Sum_probs=112.8
Q ss_pred EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEec
Q psy9598 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593 (1915)
Q Consensus 514 l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl 593 (1915)
+.........|.++|+|++++.++ ||...|+.......... +.-...+|.+. +.+++-...++|.++.-
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k~~-----G~g~~~vw~~~-----n~yAv~~~~~~I~I~kn 96 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNKAF-----GSGLSFVWSSR-----NRYAVLESSSTIKIYKN 96 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEEEE-----EE-SEEEE-TS-----SEEEEE-TTS-EEEEET
T ss_pred CCCCCcCCeeEEECCCCCEEEEEc-CCEEEEEEccCCccccc-----CceeEEEEecC-----ccEEEEECCCeEEEEEc
Confidence 333445578999999999999855 78888888554444332 23356788873 35666666888999632
Q ss_pred ccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC
Q psy9598 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 673 (1915)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp 673 (1915)
-.......+... ..+..+-. |.+|+..+.+ .|.+||+. +...+..+... .|..|.|++
T Consensus 97 ~~~~~~k~i~~~-------------~~~~~If~---G~LL~~~~~~-~i~~yDw~---~~~~i~~i~v~--~vk~V~Ws~ 154 (443)
T PF04053_consen 97 FKNEVVKSIKLP-------------FSVEKIFG---GNLLGVKSSD-FICFYDWE---TGKLIRRIDVS--AVKYVIWSD 154 (443)
T ss_dssp TEE-TT-----S-------------S-EEEEE----SSSEEEEETT-EEEEE-TT---T--EEEEESS---E-EEEEE-T
T ss_pred CccccceEEcCC-------------cccceEEc---CcEEEEECCC-CEEEEEhh---HcceeeEEecC--CCcEEEEEC
Confidence 222111111111 11222222 7777776654 89999993 34555555432 489999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCc-cccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 674 dg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
+|.+++..+.+ ++.|++........ ....+.. ...........|.+.+|..+ .+|+++ . +.|+.+ .
T Consensus 155 ~g~~val~t~~-~i~il~~~~~~~~~------~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYtT-~--~~lkYl--~ 221 (443)
T PF04053_consen 155 DGELVALVTKD-SIYILKYNLEAVAA------IPEEGVEDAFELIHEISERIKSGCWVED-CFIYTT-S--NHLKYL--V 221 (443)
T ss_dssp TSSEEEEE-S--SEEEEEE-HHHHHH------BTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE--T--TEEEEE--E
T ss_pred CCCEEEEEeCC-eEEEEEecchhccc------ccccCchhceEEEEEecceeEEEEEEcC-EEEEEc-C--CeEEEE--E
Confidence 99999888765 66676654320000 0000000 00001111456778888766 333333 2 366653 2
Q ss_pred CCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCC
Q psy9598 753 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796 (1915)
Q Consensus 753 tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s 796 (1915)
.|. ..++..-..+++-+.+.+ ..+.|.....|+.|..+.+..
T Consensus 222 ~Ge-~~~i~~ld~~~yllgy~~-~~~~ly~~Dr~~~v~~~~ld~ 263 (443)
T PF04053_consen 222 NGE-TGIIAHLDKPLYLLGYLP-KENRLYLIDRDGNVISYELDL 263 (443)
T ss_dssp TTE-EEEEEE-SS--EEEEEET-TTTEEEEE-TT--EEEEE--H
T ss_pred cCC-cceEEEcCCceEEEEEEc-cCCEEEEEECCCCEEEEEECH
Confidence 332 222222234566666666 556777777788887777654
No 448
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.15 E-value=0.034 Score=68.48 Aligned_cols=176 Identities=12% Similarity=0.185 Sum_probs=109.8
Q ss_pred CcEEEEECCCCcEEEEEeCCC-CCEEEEEE---eCC----CCEEEEEeC----------CCcEEEEECCCC----ceEEE
Q psy9598 498 LLIKLWRARDGKLLATLRGCS-GEISDIAI---DNR----NILLAAGTV----------DKTIRIWNLQTL----APISV 555 (1915)
Q Consensus 498 g~I~IWd~~tg~~~~~l~gH~-~~I~~Laf---spd----g~~LaSgs~----------DgtIrVWDl~tg----~~~~~ 555 (1915)
+.|+|.|..+...+.++.-.. ..|++++. ..+ ..+|+.|+. .|.|.++++... ..+..
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 368899998888877664332 23555443 322 468887753 288999999874 12222
Q ss_pred e--ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCc-cccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 556 L--VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 556 l--~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~-~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
+ ....++|++|+-.. ..|+++. ++.|.+|++.... ........ ....+.++... +++
T Consensus 82 i~~~~~~g~V~ai~~~~------~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~-----------~~~~i~sl~~~--~~~ 141 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSFN------GRLVVAV-GNKLYVYDLDNSKTLLKKAFYD-----------SPFYITSLSVF--KNY 141 (321)
T ss_dssp EEEEEESS-EEEEEEET------TEEEEEE-TTEEEEEEEETTSSEEEEEEE------------BSSSEEEEEEE--TTE
T ss_pred EEEEeecCcceEhhhhC------CEEEEee-cCEEEEEEccCcccchhhheec-----------ceEEEEEEecc--ccE
Confidence 2 23568899988763 3444444 4789999998876 22221111 11345555554 559
Q ss_pred EEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 633 LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 633 Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
|++|.....|.++.++..........-......++++.|-.++..++++..+|.+.++...
T Consensus 142 I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 142 ILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 9999999999988775322212222223345668888888666799999999999999765
No 449
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.15 E-value=0.25 Score=59.27 Aligned_cols=251 Identities=12% Similarity=0.087 Sum_probs=131.6
Q ss_pred CCCCEEEEEeCCCcEEEEEC-CCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceec-c
Q psy9598 528 NRNILLAAGTVDKTIRIWNL-QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-H 605 (1915)
Q Consensus 528 pdg~~LaSgs~DgtIrVWDl-~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~-~ 605 (1915)
..++.|+.|+.+| |.++++ ......... +...|..+...+.. +.|++-+ |+.|.++++..-........ .
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~----~~llvLs-d~~l~~~~L~~l~~~~~~~~~~ 76 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPEL----NLLLVLS-DGQLYVYDLDSLEPVSTSAPLA 76 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEeccc----CEEEEEc-CCccEEEEchhhcccccccccc
Confidence 4577899999998 899998 333333333 23349999998843 5555554 49999999876543321110 0
Q ss_pred Cccc-cccccCCCCCceEEEE--ECCCCcEEEEEeCCCeEEEEEecCCCC-C-ceeEEeccCCCCeeEEEEcCCCCEEEE
Q psy9598 606 EPVM-FNERIRPGNAHILCSS--FSPGGLFLATGSGDHHVRVYKMDGVDS-P-LGILEVEEHSDKVDSIQWSHSHLRFVS 680 (1915)
Q Consensus 606 ~~~~-~~~~~~~~~~~V~~l~--fspdg~~Lasgs~Dg~I~IwDl~~~~~-~-~~i~~l~~h~~~V~sl~fspdg~~L~s 680 (1915)
.+.. ...........+..++ -...+...++......|.||.+..... . .....+ .....+.+++|. ++.|+.
T Consensus 77 ~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~-~lp~~~~~i~~~--~~~i~v 153 (275)
T PF00780_consen 77 FPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEI-SLPDPPSSIAFL--GNKICV 153 (275)
T ss_pred ccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEE-EcCCCcEEEEEe--CCEEEE
Confidence 0000 0000011122333333 122333334444455999999865322 2 233333 344788999998 557787
Q ss_pred EeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEE--
Q psy9598 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ-- 758 (1915)
Q Consensus 681 gs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~-- 758 (1915)
|..++ ..+.|+.++....+....... ............+..+.++ ++.+|++. +..-.+.|. .|....
T Consensus 154 ~~~~~-f~~idl~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~e~Ll~~---~~~g~fv~~-~G~~~r~~ 223 (275)
T PF00780_consen 154 GTSKG-FYLIDLNTGSPSELLDPSDSS----SSFKSRNSSSKPLGIFQLS-DNEFLLCY---DNIGVFVNK-NGEPSRKS 223 (275)
T ss_pred EeCCc-eEEEecCCCCceEEeCccCCc----chhhhcccCCCceEEEEeC-CceEEEEe---cceEEEEcC-CCCcCccc
Confidence 77665 667788876644332110000 0000111122334444443 45666653 333333443 454433
Q ss_pred EeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceeee
Q psy9598 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH 806 (1915)
Q Consensus 759 ~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~ 806 (1915)
.+.-. ....++++.. .+|+..+. +.|-||++.+++. ++.+.
T Consensus 224 ~i~W~-~~p~~~~~~~---pyli~~~~-~~iEV~~~~~~~l--vQ~i~ 264 (275)
T PF00780_consen 224 TIQWS-SAPQSVAYSS---PYLIAFSS-NSIEVRSLETGEL--VQTIP 264 (275)
T ss_pred EEEcC-CchhEEEEEC---CEEEEECC-CEEEEEECcCCcE--EEEEE
Confidence 33322 2445555543 46666555 5699999999987 55543
No 450
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.13 E-value=0.068 Score=67.04 Aligned_cols=232 Identities=11% Similarity=0.096 Sum_probs=125.6
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCC----------------------c------------------eeEEe
Q psy9598 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP----------------------L------------------GILEV 659 (1915)
Q Consensus 620 ~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~----------------------~------------------~i~~l 659 (1915)
.|..++|++...-|++|...|.|.||.+...... . ....+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 5889999999889999999999999987422110 0 11122
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEEC-----CCC-
Q psy9598 660 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWD-----ASD- 733 (1915)
Q Consensus 660 ~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~s-----pdg- 733 (1915)
....++|++++.|.-| +++.|..+|.+.|.|++....++... ... ..........|+++.|+ .|+
T Consensus 83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~-i~~-------~~~~~~~~~~vt~ieF~vm~~~~D~y 153 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNEN-IRE-------SFLSKSSSSYVTSIEFSVMTLGGDGY 153 (395)
T ss_dssp ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEE-GGG---------T-SS----EEEEEEEEEE-TTSSS
T ss_pred eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeecc-ccc-------cccccccccCeeEEEEEEEecCCCcc
Confidence 3346889999997544 89999999999999998877655421 111 11112234456666665 233
Q ss_pred --CEEEEEEecCCeEEEEECCC---Cc----eEEEeeCCCCCeEEEE-EccCC--------------------CCEEEEE
Q psy9598 734 --RWVITAINFNFQIKIWDAFN---GD----LVQVLKGHTNEVFVLE-SHPFD--------------------SRVLLSA 783 (1915)
Q Consensus 734 --~~L~t~s~~Dg~I~vwD~~t---g~----~i~~l~gH~~~V~sl~-~sp~d--------------------g~~LaSg 783 (1915)
-.+++|.+ .|.+.+|.+.- +. .......|.+.|..|. ++..+ ..++++
T Consensus 154 SSi~L~vGTn-~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVv- 231 (395)
T PF08596_consen 154 SSICLLVGTN-SGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVV- 231 (395)
T ss_dssp EEEEEEEEET-TSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEE-
T ss_pred cceEEEEEeC-CCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEE-
Confidence 45777777 89999997641 21 2222234666666665 32111 123444
Q ss_pred ecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEE-----cCCCCEEEEEeCCCeEEEEeCCCCcccccCCC----
Q psy9598 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW-----SPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR---- 854 (1915)
Q Consensus 784 s~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vaf-----Spdg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~---- 854 (1915)
..+..|+|+...+.+. ..... ...-....+.+ ...+..|++-..+|.|++|.+..-+.+..+..
T Consensus 232 vSe~~irv~~~~~~k~--~~K~~-----~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~ 304 (395)
T PF08596_consen 232 VSESDIRVFKPPKSKG--AHKSF-----DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPL 304 (395)
T ss_dssp E-SSEEEEE-TT---E--EEEE------SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS--
T ss_pred EcccceEEEeCCCCcc--cceee-----ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcc
Confidence 4466899999887665 22211 11112223334 23677899999999999999998766543321
Q ss_pred ------ceeecCCCCeeeecC
Q psy9598 855 ------ELFFHTDYRTLNRPN 869 (1915)
Q Consensus 855 ------~~~F~~d~~~Lv~~~ 869 (1915)
...|..+|..+...+
T Consensus 305 d~~~~~~ssis~~Gdi~~~~g 325 (395)
T PF08596_consen 305 DSRRLSSSSISRNGDIFYWTG 325 (395)
T ss_dssp -HHHHTT-EE-TTS-EEEE-S
T ss_pred ccccccccEECCCCCEEEEeC
Confidence 567788888776443
No 451
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.08 E-value=0.082 Score=60.46 Aligned_cols=250 Identities=14% Similarity=0.109 Sum_probs=143.8
Q ss_pred EEEEeccCccCCCcEEEEEeCCCe-EEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC---
Q psy9598 564 TGVNFCPLEVNGFNYLASTSTDGC-IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD--- 639 (1915)
Q Consensus 564 ~sl~fsp~~~~d~~~L~sgs~Dgt-I~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D--- 639 (1915)
..|+|+|.. ...++.+-.-|+ ..++|..+...+..+... ....+.+| -.|||+|.+|.+.-.|
T Consensus 71 Hgi~~~p~~---~ravafARrPGtf~~vfD~~~~~~pv~~~s~----~~RHfyGH------Gvfs~dG~~LYATEndfd~ 137 (366)
T COG3490 71 HGIAFHPAL---PRAVAFARRPGTFAMVFDPNGAQEPVTLVSQ----EGRHFYGH------GVFSPDGRLLYATENDFDP 137 (366)
T ss_pred CCeecCCCC---cceEEEEecCCceEEEECCCCCcCcEEEecc----cCceeecc------cccCCCCcEEEeecCCCCC
Confidence 457788854 366677766665 467888877654443322 11223333 3699999999876543
Q ss_pred --CeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEE--------EccCCceEEeeecccccCC
Q psy9598 640 --HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW--------YYKCSQWRFIRLDMNTCLP 709 (1915)
Q Consensus 640 --g~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IW--------Dl~~~~~~~~~~~~~~~~~ 709 (1915)
|.|-|||.+ .....+..+..|.-.-..+.|.+||..|+.+. |-|..- ++.+.+.....++..+..-
T Consensus 138 ~rGViGvYd~r--~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNldsMePSlvlld~atG~l 213 (366)
T COG3490 138 NRGVIGVYDAR--EGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNLDSMEPSLVLLDAATGNL 213 (366)
T ss_pred CCceEEEEecc--cccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCccccchhhcCccEEEEeccccch
Confidence 789999985 55667778888888889999999999888763 444443 2223322222222111111
Q ss_pred CCccccccccccccEEEEEECCCCCEEEEEEecCCe-----EEEEECCCCceEEEeeC-------CCCCeEEEEEccCCC
Q psy9598 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ-----IKIWDAFNGDLVQVLKG-------HTNEVFVLESHPFDS 777 (1915)
Q Consensus 710 ~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~-----I~vwD~~tg~~i~~l~g-------H~~~V~sl~~sp~dg 777 (1915)
..+.......+...|..++..+||+.++.+-. .|. .-|=-...|+.+.-+.. -...|-+|+.+..++
T Consensus 214 iekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy-~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~g 292 (366)
T COG3490 214 IEKHTLPASLRQLSIRHLDIGRDGTVWFGCQY-RGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDG 292 (366)
T ss_pred hhhccCchhhhhcceeeeeeCCCCcEEEEEEe-eCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCC
Confidence 11111122235567888999888876655432 221 11111223344433321 234677888887455
Q ss_pred CEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9598 778 RVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 842 (1915)
Q Consensus 778 ~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwd 842 (1915)
-+.+|.-.-+...|||..+|.......+. -++-.-+...-|++++.+|.|.++.
T Consensus 293 lV~lTSP~GN~~vi~da~tG~vv~~a~l~-----------daaGva~~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 293 LVALTSPRGNRAVIWDAATGAVVSEAALP-----------DAAGVAAAKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred eEEEecCCCCeEEEEEcCCCcEEeccccc-----------ccccceeccCceEEecCCceEEecc
Confidence 55555555667789999999872111111 1112233455577777788888873
No 452
>KOG2079|consensus
Probab=97.07 E-value=0.0077 Score=79.05 Aligned_cols=104 Identities=24% Similarity=0.371 Sum_probs=80.4
Q ss_pred CCEEEEEECCCcEEEEECCCC-cEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEE
Q psy9598 488 GEVIVTGADDLLIKLWRARDG-KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 566 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg-~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl 566 (1915)
+.+|+.|+..|.|...|+... .....=....++|++++|+.+|.+++.|-.+|.|.+||+.++..++.+..|..+++++
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v 178 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV 178 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence 668999999999999997542 1112212346789999999999999999999999999999999999998888777777
Q ss_pred EeccCccCCCcEEEEEeCCCeEEEEecc
Q psy9598 567 NFCPLEVNGFNYLASTSTDGCIGFWKYK 594 (1915)
Q Consensus 567 ~fsp~~~~d~~~L~sgs~DgtI~iWDl~ 594 (1915)
-+.--. +++..++++...|. +|.+.
T Consensus 179 i~v~~t-~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 179 IFVGRT-SQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred EEEEEe-CCCcEEEEccCCCc--eEEEE
Confidence 665433 24457888887776 67654
No 453
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.04 E-value=0.3 Score=62.55 Aligned_cols=250 Identities=13% Similarity=0.113 Sum_probs=125.7
Q ss_pred EEEEEEeCCCCEEEEE-eCCC----cEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC---------
Q psy9598 521 ISDIAIDNRNILLAAG-TVDK----TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG--------- 586 (1915)
Q Consensus 521 I~~Lafspdg~~LaSg-s~Dg----tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg--------- 586 (1915)
+..++++|+|++||.+ +..| +|+|+|+.+|+.+....... ...++.|.+++ ..|+....+.
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~----~~~~y~~~~~~~~~~~~~~ 200 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDG----KGFFYTRFDEDQRTSDSGY 200 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTS----SEEEEEECSTTTSS-CCGC
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCC----CEEEEEEeCcccccccCCC
Confidence 3467889999988865 3333 59999999997765321111 11239999843 4554443222
Q ss_pred --eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCC----CeEEEEEecCCC-CCceeEEe
Q psy9598 587 --CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD----HHVRVYKMDGVD-SPLGILEV 659 (1915)
Q Consensus 587 --tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~D----g~I~IwDl~~~~-~~~~i~~l 659 (1915)
.|.+|.+.+......+.+.... +......+..++++++|+..... ..|.+.++.... .......+
T Consensus 201 ~~~v~~~~~gt~~~~d~lvfe~~~--------~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l 272 (414)
T PF02897_consen 201 PRQVYRHKLGTPQSEDELVFEEPD--------EPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLL 272 (414)
T ss_dssp CEEEEEEETTS-GGG-EEEEC-TT--------CTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEE
T ss_pred CcEEEEEECCCChHhCeeEEeecC--------CCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEE
Confidence 3677777665433223333111 11126678899999987765443 346666664320 11222333
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEe---CCCcEEEEEccCCc---eEEeeecccccCCCCccccccccccccEEEEEECCCC
Q psy9598 660 EEHSDKVDSIQWSHSHLRFVSGS---RDGTALIWYYKCSQ---WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733 (1915)
Q Consensus 660 ~~h~~~V~sl~fspdg~~L~sgs---~DG~I~IWDl~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg 733 (1915)
..+...+....-+..+.+++... ..+.|...++.... +.. ....+...+.-..+...+
T Consensus 273 ~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~----------------~l~~~~~~~~l~~~~~~~ 336 (414)
T PF02897_consen 273 SPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWT----------------VLIPEDEDVSLEDVSLFK 336 (414)
T ss_dssp EESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEE----------------EEE--SSSEEEEEEEEET
T ss_pred eCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEeccccccccccee----------------EEcCCCCceeEEEEEEEC
Confidence 33333443333233333333332 22445555555443 111 111122222222333345
Q ss_pred CEEEEEEecCC--eEEEEECCCCceEEEee-CCCCCeEEEEEccCCCCEEEEEec---CceEEEEECCCCcc
Q psy9598 734 RWVITAINFNF--QIKIWDAFNGDLVQVLK-GHTNEVFVLESHPFDSRVLLSAGH---DGLIIIWDILSSKQ 799 (1915)
Q Consensus 734 ~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~-gH~~~V~sl~~sp~dg~~LaSgs~---DG~I~IWdl~s~~~ 799 (1915)
.+|+.....++ .|++|++..+.....+. .-.+.|..+...+....++++.+. -++|+.||+.+++.
T Consensus 337 ~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 337 DYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp TEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred CEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 66666555355 58889998344444443 234446666655533444444443 46888899988876
No 454
>KOG2079|consensus
Probab=97.02 E-value=0.0078 Score=79.01 Aligned_cols=101 Identities=17% Similarity=0.315 Sum_probs=69.8
Q ss_pred cEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCcee
Q psy9598 577 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGI 656 (1915)
Q Consensus 577 ~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i 656 (1915)
..++.|+..|.|-..|+.+.-+. ++ .-....++|+|++|+.+|.+++.|-.+|.|.+||+... ..+
T Consensus 100 ~~ivi~Ts~ghvl~~d~~~nL~~----~~-------~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~---k~l 165 (1206)
T KOG2079|consen 100 VPIVIGTSHGHVLLSDMTGNLGP----LH-------QNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA---KIL 165 (1206)
T ss_pred eeEEEEcCchhhhhhhhhcccch----hh-------cCCccCCcceeeEecCCCceeccccCCCcEEEEEccCC---cce
Confidence 57888898999988888765221 11 00123488999999999999999999999999999432 333
Q ss_pred EEeccCCCCeeEE---EEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 657 LEVEEHSDKVDSI---QWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 657 ~~l~~h~~~V~sl---~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
..+..|..+++++ .+..++..++++...|. +|.+.
T Consensus 166 ~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 166 KVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred eeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 4444454444443 34456667888888776 67654
No 455
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.00 E-value=0.11 Score=60.71 Aligned_cols=211 Identities=11% Similarity=0.151 Sum_probs=117.0
Q ss_pred EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEE
Q psy9598 555 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 634 (1915)
Q Consensus 555 ~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~La 634 (1915)
.+.+-...+.+|+|.|+. +.++++....+.|..++.. +..+....+. +.+..-.+++..++.+++
T Consensus 16 ~l~g~~~e~SGLTy~pd~---~tLfaV~d~~~~i~els~~-G~vlr~i~l~-----------g~~D~EgI~y~g~~~~vl 80 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDT---GTLFAVQDEPGEIYELSLD-GKVLRRIPLD-----------GFGDYEGITYLGNGRYVL 80 (248)
T ss_dssp E-TT--S-EEEEEEETTT---TEEEEEETTTTEEEEEETT---EEEEEE-S-----------S-SSEEEEEE-STTEEEE
T ss_pred ECCCccCCccccEEcCCC---CeEEEEECCCCEEEEEcCC-CCEEEEEeCC-----------CCCCceeEEEECCCEEEE
Confidence 445556679999999943 4677777788888888864 4444444433 235678899988888888
Q ss_pred EEeCCCeEEEEEecCCCCCceeE-----Ee---ccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccC---CceEEeeec
Q psy9598 635 TGSGDHHVRVYKMDGVDSPLGIL-----EV---EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC---SQWRFIRLD 703 (1915)
Q Consensus 635 sgs~Dg~I~IwDl~~~~~~~~i~-----~l---~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~---~~~~~~~~~ 703 (1915)
+.-.++.+.++++.......... .+ ..++..+-.|+|.+.+..|+++-...-..||.+.. .........
T Consensus 81 ~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~ 160 (248)
T PF06977_consen 81 SEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDD 160 (248)
T ss_dssp EETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-
T ss_pred EEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccc
Confidence 77779999999984332221111 11 13456689999999988888888777777877664 111110000
Q ss_pred ccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCC---------CCeEEEEEcc
Q psy9598 704 MNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT---------NEVFVLESHP 774 (1915)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~---------~~V~sl~~sp 774 (1915)
............+.+++++|....|++-+..+..|.++| .+|+.+..+.-.. ...-.|+|.+
T Consensus 161 --------~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~ 231 (248)
T PF06977_consen 161 --------QDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDP 231 (248)
T ss_dssp --------HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-T
T ss_pred --------cccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECC
Confidence 000001223345788999998766666666688999999 6788777665222 2357788888
Q ss_pred CCCCEEEEEecCceEEE
Q psy9598 775 FDSRVLLSAGHDGLIII 791 (1915)
Q Consensus 775 ~dg~~LaSgs~DG~I~I 791 (1915)
+|++.++. .-+..++
T Consensus 232 -~G~LYIvs-EpNlfy~ 246 (248)
T PF06977_consen 232 -DGNLYIVS-EPNLFYR 246 (248)
T ss_dssp -T--EEEEE-TTTEEEE
T ss_pred -CCCEEEEc-CCceEEE
Confidence 77655543 4444444
No 456
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.99 E-value=0.077 Score=62.07 Aligned_cols=212 Identities=10% Similarity=0.051 Sum_probs=113.3
Q ss_pred eEEecCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEeCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Q psy9598 469 HYVNLGHLSAVFCVLFDKLGE-VIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 469 ~~~l~gH~~~V~~vafspdg~-~LaTGs~Dg~I~IWd~~tg~~~~~l~gH-~~~I~~Lafspdg~~LaSgs~DgtIrVWD 546 (1915)
.+.|.|-...|..|+|+|+.. ++++....+.|...+. +|+.+..+... .+..-.|++..++.++++.-.++.+.+.+
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 456777777899999999765 4555555678877886 68888877533 35678899988887777766689999998
Q ss_pred CCCCc---eE---EEee-----cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccC
Q psy9598 547 LQTLA---PI---SVLV-----GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 615 (1915)
Q Consensus 547 l~tg~---~~---~~l~-----~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~ 615 (1915)
+.... .. ..+. .+...+-.|+|.+.. +.|+.+....-..+|.+................... ..
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~----~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 167 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKT----NRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDD-DK 167 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETTT----TEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH--HT
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCCC----CEEEEEeCCCChhhEEEccccCccceeecccccccc-cc
Confidence 83311 11 1121 244568999999954 566667777777777766411000000000000000 11
Q ss_pred CCCCceEEEEECCC-CcEEEEEeCCCeEEEEEecCCCCCceeEEeccC-------CCCeeEEEEcCCCCEEEEEeCCCcE
Q psy9598 616 PGNAHILCSSFSPG-GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH-------SDKVDSIQWSHSHLRFVSGSRDGTA 687 (1915)
Q Consensus 616 ~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h-------~~~V~sl~fspdg~~L~sgs~DG~I 687 (1915)
.....+.+++++|. |.+++....+..|.++|.. ........+... -..--.|+|.++|++++++ .-+..
T Consensus 168 ~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~--G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlf 244 (248)
T PF06977_consen 168 LFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ--GRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLF 244 (248)
T ss_dssp --SS---EEEEETTTTEEEEEETTTTEEEEE-TT----EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEE
T ss_pred ceeccccceEEcCCCCeEEEEECCCCeEEEECCC--CCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceE
Confidence 22345788999985 5667777778888888853 223333344331 1346789999999755554 44444
Q ss_pred EE
Q psy9598 688 LI 689 (1915)
Q Consensus 688 ~I 689 (1915)
.+
T Consensus 245 y~ 246 (248)
T PF06977_consen 245 YR 246 (248)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 457
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.94 E-value=0.071 Score=67.76 Aligned_cols=224 Identities=13% Similarity=0.076 Sum_probs=112.7
Q ss_pred cCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEe
Q psy9598 558 GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 637 (1915)
Q Consensus 558 ~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs 637 (1915)
........+.++|.+ +.++. +.||...++...... ... .+....++|.+.+. +|+-.
T Consensus 30 ~~~~~p~~ls~npng----r~v~V-~g~geY~iyt~~~~r---~k~--------------~G~g~~~vw~~~n~-yAv~~ 86 (443)
T PF04053_consen 30 SCEIYPQSLSHNPNG----RFVLV-CGDGEYEIYTALAWR---NKA--------------FGSGLSFVWSSRNR-YAVLE 86 (443)
T ss_dssp E-SS--SEEEE-TTS----SEEEE-EETTEEEEEETTTTE---EEE--------------EEE-SEEEE-TSSE-EEEE-
T ss_pred CCCcCCeeEEECCCC----CEEEE-EcCCEEEEEEccCCc---ccc--------------cCceeEEEEecCcc-EEEEE
Confidence 344457899999943 66666 667777777622211 110 13445688988655 66666
Q ss_pred CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCcccccc
Q psy9598 638 GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717 (1915)
Q Consensus 638 ~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1915)
..+.|.|+.--.......+ .+ ...+..|- . |.+|+..+.+ .|.+||+.+++.+...
T Consensus 87 ~~~~I~I~kn~~~~~~k~i-~~---~~~~~~If-~--G~LL~~~~~~-~i~~yDw~~~~~i~~i---------------- 142 (443)
T PF04053_consen 87 SSSTIKIYKNFKNEVVKSI-KL---PFSVEKIF-G--GNLLGVKSSD-FICFYDWETGKLIRRI---------------- 142 (443)
T ss_dssp TTS-EEEEETTEE-TT---------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEE----------------
T ss_pred CCCeEEEEEcCccccceEE-cC---CcccceEE-c--CcEEEEECCC-CEEEEEhhHcceeeEE----------------
Confidence 6888999632111111111 11 11344442 2 7777776555 8999999988755422
Q ss_pred ccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCC-----------ceEEEeeCCCCCeEEEEEccCCCCEEEEEecC
Q psy9598 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG-----------DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786 (1915)
Q Consensus 718 ~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg-----------~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~D 786 (1915)
....|..|.|+++|.+++..+. ..+.|++.... ..+..+..-...|.+.+|.. + .++-....
T Consensus 143 --~v~~vk~V~Ws~~g~~val~t~--~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~-d--~fiYtT~~ 215 (443)
T PF04053_consen 143 --DVSAVKYVIWSDDGELVALVTK--DSIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVE-D--CFIYTTSN 215 (443)
T ss_dssp --SS-E-EEEEE-TTSSEEEEE-S---SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEET-T--EEEEE-TT
T ss_pred --ecCCCcEEEEECCCCEEEEEeC--CeEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEc-C--EEEEEcCC
Confidence 1224789999999999999874 56777765322 03333333245677888865 3 44433333
Q ss_pred ceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9598 787 GLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGF 846 (1915)
Q Consensus 787 G~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~Lasg~~dG~I~Iwdl~s~ 846 (1915)
.|+. +..|....+..+ ..+++=+...+..+.|.+.+.++.|..+.+...
T Consensus 216 -~lkY--l~~Ge~~~i~~l--------d~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~~ 264 (443)
T PF04053_consen 216 -HLKY--LVNGETGIIAHL--------DKPLYLLGYLPKENRLYLIDRDGNVISYELDLS 264 (443)
T ss_dssp -EEEE--EETTEEEEEEE---------SS--EEEEEETTTTEEEEE-TT--EEEEE--HH
T ss_pred -eEEE--EEcCCcceEEEc--------CCceEEEEEEccCCEEEEEECCCCEEEEEECHH
Confidence 6665 334443112222 245666777787788888899999888887753
No 458
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.93 E-value=0.077 Score=70.76 Aligned_cols=150 Identities=13% Similarity=0.117 Sum_probs=101.2
Q ss_pred CCCEEEEE-eCCCcEEEEECCCCceEEEeecCCCC-eEEEEeccCcc---CCCcEEEEEeCCCeEEEEecccCcccccee
Q psy9598 529 RNILLAAG-TVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEV---NGFNYLASTSTDGCIGFWKYKLDIDISKTV 603 (1915)
Q Consensus 529 dg~~LaSg-s~DgtIrVWDl~tg~~~~~l~~h~~~-V~sl~fsp~~~---~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~ 603 (1915)
+.++|+.. .....|+-.|+.+|+.+..+..|... |..+ .|... -...-.+.|-.+..|..||.+-... .+.
T Consensus 492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~--k~v 567 (794)
T PF08553_consen 492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGN--KLV 567 (794)
T ss_pred ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCC--cee
Confidence 34454443 35678999999999999999887654 5544 34210 0123456677778899999986431 111
Q ss_pred ccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeC
Q psy9598 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 683 (1915)
Q Consensus 604 ~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~ 683 (1915)
.... ..........|++-+.+| +||+|+.+|.|++||-.+ ...-..+.+...+|.+|..+.||.+|++.+.
T Consensus 568 ~~~~-----k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g---~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~ 638 (794)
T PF08553_consen 568 DSQS-----KQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLG---KRAKTALPGLGDPIIGIDVTADGKWILATCK 638 (794)
T ss_pred eccc-----cccccCCCceEEEecCCc-eEEEEeCCCcEEeecccc---hhhhhcCCCCCCCeeEEEecCCCcEEEEeec
Confidence 1111 112344668899888888 799999999999999532 1233346677899999999999998876654
Q ss_pred CCcEEEEEc
Q psy9598 684 DGTALIWYY 692 (1915)
Q Consensus 684 DG~I~IWDl 692 (1915)
..|.|++.
T Consensus 639 -tyLlLi~t 646 (794)
T PF08553_consen 639 -TYLLLIDT 646 (794)
T ss_pred -ceEEEEEE
Confidence 56667765
No 459
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.92 E-value=0.68 Score=60.85 Aligned_cols=68 Identities=7% Similarity=-0.125 Sum_probs=45.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEeecCC-CCeEE----------EEeccCccCCCcEEEEEeCCCeEEEEecccCcc
Q psy9598 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQ-GIITG----------VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598 (1915)
Q Consensus 530 g~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~-~~V~s----------l~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~ 598 (1915)
+..|+.++.++.|.-.|..+|+.+..+.... ..+.. +++. +..++.++.|+.|.-.|..+++.
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~------~~~v~v~t~dg~l~ALDa~TGk~ 142 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY------DGKVFFGTLDARLVALDAKTGKV 142 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE------CCEEEEEcCCCEEEEEECCCCCE
Confidence 4466667778889889999998887764321 11111 1221 25677888999999999999987
Q ss_pred cccee
Q psy9598 599 ISKTV 603 (1915)
Q Consensus 599 ~~~~~ 603 (1915)
+....
T Consensus 143 ~W~~~ 147 (527)
T TIGR03075 143 VWSKK 147 (527)
T ss_pred Eeecc
Confidence 65544
No 460
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=96.91 E-value=0.25 Score=61.68 Aligned_cols=266 Identities=14% Similarity=0.128 Sum_probs=139.4
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE-EEeCC----------------CCCEEEEEEeCCCCEEEEEeC
Q psy9598 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGC----------------SGEISDIAIDNRNILLAAGTV 538 (1915)
Q Consensus 476 ~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~-~l~gH----------------~~~I~~Lafspdg~~LaSgs~ 538 (1915)
...+....|||+|++||... ++.|.++++.++...+ +..|- -+.-..+.|||||++||....
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence 56788899999999999886 5699999988885443 22220 012246889999999988764
Q ss_pred C-CcEEEEECCCCceEEEeecCCC---CeEEEEeccCccCCCcEEEEEeCCC--eEEEEecccCccccceeccCcccccc
Q psy9598 539 D-KTIRIWNLQTLAPISVLVGHQG---IITGVNFCPLEVNGFNYLASTSTDG--CIGFWKYKLDIDISKTVFHEPVMFNE 612 (1915)
Q Consensus 539 D-gtIrVWDl~tg~~~~~l~~h~~---~V~sl~fsp~~~~d~~~L~sgs~Dg--tI~iWDl~~~~~~~~~~~~~~~~~~~ 612 (1915)
| ..|..+.+. ....... .+..+.+-- .|..+. .+.++|+.++... .+..+ .
T Consensus 121 d~~~v~~~~~~------~~~~~~~~yp~~~~~~YPk----------~G~~np~v~l~v~~~~~~~~~---~~~~~----~ 177 (353)
T PF00930_consen 121 DEREVPEYPLP------DYSPPDSQYPEVESIRYPK----------AGDPNPRVSLFVVDLASGKTT---ELDPP----N 177 (353)
T ss_dssp E-TTS-EEEEE------EESSSTESS-EEEEEE--B----------TTS---EEEEEEEESSSTCCC---EE-------H
T ss_pred CCcCCceEEee------ccCCccccCCcccccccCC----------CCCcCCceEEEEEECCCCcEE---Eeeec----c
Confidence 4 444444321 1111111 234444421 122222 3556777766532 11100 0
Q ss_pred ccCCCCCceEEEEECCCCcEEEEE--eCCC---eEEEEEecCCCCCceeEEeccCCCCe---eEEEEc-CCCC-EEEEEe
Q psy9598 613 RIRPGNAHILCSSFSPGGLFLATG--SGDH---HVRVYKMDGVDSPLGILEVEEHSDKV---DSIQWS-HSHL-RFVSGS 682 (1915)
Q Consensus 613 ~~~~~~~~V~~l~fspdg~~Lasg--s~Dg---~I~IwDl~~~~~~~~i~~l~~h~~~V---~sl~fs-pdg~-~L~sgs 682 (1915)
........+..+.|.+++..|++. ..+. .+.++|+.... ...+. .....+.| ..+.|. +++. +|....
T Consensus 178 ~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~-~~~~~-~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~ 255 (353)
T PF00930_consen 178 SLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGE-TRVVL-EETSDGWVDVYDPPHFLGPDGNEFLWISE 255 (353)
T ss_dssp HHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTT-CEEEE-EEESSSSSSSSSEEEE-TTTSSEEEEEEE
T ss_pred ccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCc-eeEEE-EecCCcceeeecccccccCCCCEEEEEEE
Confidence 112234678999999999844433 3332 45566664322 22222 22223332 355554 5554 555556
Q ss_pred CCCcEEEEEccCCceEEeeecccccCCCCccccccccccccE-EEEEECCCCCEEEEEEecCC----eEEEEECCCCceE
Q psy9598 683 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKV-TMVAWDASDRWVITAINFNF----QIKIWDAFNGDLV 757 (1915)
Q Consensus 683 ~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V-~~va~spdg~~L~t~s~~Dg----~I~vwD~~tg~~i 757 (1915)
.+|.-+||-+....-.. ...+...-.| ..+.|++++..|+..+..++ .|+.-++..+..+
T Consensus 256 ~~G~~hly~~~~~~~~~---------------~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~ 320 (353)
T PF00930_consen 256 RDGYRHLYLYDLDGGKP---------------RQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEP 320 (353)
T ss_dssp TTSSEEEEEEETTSSEE---------------EESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEE
T ss_pred cCCCcEEEEEcccccce---------------eccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCe
Confidence 88876666544322110 1122233445 34788899888876665322 5766777634555
Q ss_pred EEeeCCCCCeEEEEEccCCCCEEEEE
Q psy9598 758 QVLKGHTNEVFVLESHPFDSRVLLSA 783 (1915)
Q Consensus 758 ~~l~gH~~~V~sl~~sp~dg~~LaSg 783 (1915)
..|....+....+.|+| ++++++..
T Consensus 321 ~~LT~~~~~~~~~~~Sp-dg~y~v~~ 345 (353)
T PF00930_consen 321 KCLTCEDGDHYSASFSP-DGKYYVDT 345 (353)
T ss_dssp EESSTTSSTTEEEEE-T-TSSEEEEE
T ss_pred EeccCCCCCceEEEECC-CCCEEEEE
Confidence 66665544447899999 77766543
No 461
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.90 E-value=0.38 Score=60.67 Aligned_cols=264 Identities=11% Similarity=0.027 Sum_probs=159.7
Q ss_pred cEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCE-EEEEeCCCcEEEEECCCCceEEE
Q psy9598 478 AVFCVLFDKLGEVIVTGA-DDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL-LAAGTVDKTIRIWNLQTLAPISV 555 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTGs-~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~-LaSgs~DgtIrVWDl~tg~~~~~ 555 (1915)
....+++.++|..+.... ....+.+.+............-...-..+++++.+.. .++...++.|.+.|+.+...++.
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~ 111 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGS 111 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeE
Confidence 445667777774444332 2224555555421111111111133457788888874 45555568999999888777766
Q ss_pred eecCCCCeEEEEeccCccCCCcEEEEE-e--CCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcE
Q psy9598 556 LVGHQGIITGVNFCPLEVNGFNYLAST-S--TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632 (1915)
Q Consensus 556 l~~h~~~V~sl~fsp~~~~d~~~L~sg-s--~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~ 632 (1915)
+.--. ....+++.+.+ ..++.+ + .++++.+.|..+...+...... ..+ ..++++|+|..
T Consensus 112 ~~vG~-~P~~~~~~~~~----~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG------------~~P-~~~a~~p~g~~ 173 (381)
T COG3391 112 IPVGL-GPVGLAVDPDG----KYVYVANAGNGNNTVSVIDAATNKVTATIPVG------------NTP-TGVAVDPDGNK 173 (381)
T ss_pred eeecc-CCceEEECCCC----CEEEEEecccCCceEEEEeCCCCeEEEEEecC------------CCc-ceEEECCCCCe
Confidence 54322 55788998853 444444 3 3688888888777654442211 122 78999999996
Q ss_pred EEEEe-CCCeEEEEEecCCCCCc-eeEEeccCCCCeeEEEEcCCCCEEEEEeCC---CcEEEEEccCCceEEeeeccccc
Q psy9598 633 LATGS-GDHHVRVYKMDGVDSPL-GILEVEEHSDKVDSIQWSHSHLRFVSGSRD---GTALIWYYKCSQWRFIRLDMNTC 707 (1915)
Q Consensus 633 Lasgs-~Dg~I~IwDl~~~~~~~-~i~~l~~h~~~V~sl~fspdg~~L~sgs~D---G~I~IWDl~~~~~~~~~~~~~~~ 707 (1915)
+++.. .++.|.++|........ .......-...-..+.++++|.++++.... +.+.+.|..++........
T Consensus 174 vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~---- 249 (381)
T COG3391 174 VYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLP---- 249 (381)
T ss_pred EEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccc----
Confidence 66655 78899999974322110 000011122334567899999966655443 5888888877664332110
Q ss_pred CCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCC---CeEEEEEcc
Q psy9598 708 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN---EVFVLESHP 774 (1915)
Q Consensus 708 ~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~---~V~sl~~sp 774 (1915)
.... ....+.++|+|.++.+.....+.+.+.|..+......+..... .+..+++.+
T Consensus 250 ----------~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~ 308 (381)
T COG3391 250 ----------VGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISP 308 (381)
T ss_pred ----------cccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceecccee
Confidence 0111 3445889999999999876568999999988887777654433 355555555
No 462
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.81 E-value=0.59 Score=59.79 Aligned_cols=246 Identities=13% Similarity=0.056 Sum_probs=122.5
Q ss_pred cEEEEEEcCCCCEEEEE-ECCC----cEEEEECCCCcEEEEE-eCCCCCEEEEEEeCCCCEEEEEeCCC-----------
Q psy9598 478 AVFCVLFDKLGEVIVTG-ADDL----LIKLWRARDGKLLATL-RGCSGEISDIAIDNRNILLAAGTVDK----------- 540 (1915)
Q Consensus 478 ~V~~vafspdg~~LaTG-s~Dg----~I~IWd~~tg~~~~~l-~gH~~~I~~Lafspdg~~LaSgs~Dg----------- 540 (1915)
.+..+++||+|++||.+ +..| .|+|+|+.+|+.+... .+. ....+.|.++++.|+....+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 34467889999999866 3334 5999999999876532 321 123499999988776665433
Q ss_pred cEEEEECCCCceE--EEeecCCCC--eEEEEeccCccCCCcEEEEEe-CC---CeEEEEecccCc---cccceeccCccc
Q psy9598 541 TIRIWNLQTLAPI--SVLVGHQGI--ITGVNFCPLEVNGFNYLASTS-TD---GCIGFWKYKLDI---DISKTVFHEPVM 609 (1915)
Q Consensus 541 tIrVWDl~tg~~~--~~l~~h~~~--V~sl~fsp~~~~d~~~L~sgs-~D---gtI~iWDl~~~~---~~~~~~~~~~~~ 609 (1915)
.|++|.+.+...- ..+...... ...+..++ ++.+|+..+ .. ..|.+.++..+. ......
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~----d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l------ 272 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSK----DGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLL------ 272 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-T----TSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEE------
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecC----cccEEEEEEEccccCCeEEEEeccccCCCcCCcEEE------
Confidence 3888888876532 444443333 45677776 346655433 22 235666665531 000110
Q ss_pred cccccCCCCCce-EEEEECCCCcEEEEEe---CCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEE-EEeCC
Q psy9598 610 FNERIRPGNAHI-LCSSFSPGGLFLATGS---GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV-SGSRD 684 (1915)
Q Consensus 610 ~~~~~~~~~~~V-~~l~fspdg~~Lasgs---~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~-sgs~D 684 (1915)
......+ ..+... ++.+++... .++.|...++...........+..|...+.-..+...+.+|+ +...+
T Consensus 273 -----~~~~~~~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~ 346 (414)
T PF02897_consen 273 -----SPREDGVEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYREN 346 (414)
T ss_dssp -----EESSSS-EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEET
T ss_pred -----eCCCCceEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEEC
Confidence 0111222 223333 444444332 235666666643322112224555555433333333444444 44444
Q ss_pred Cc--EEEEEcc-CCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEe---cCCeEEEEECCCCceE
Q psy9598 685 GT--ALIWYYK-CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN---FNFQIKIWDAFNGDLV 757 (1915)
Q Consensus 685 G~--I~IWDl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~---~Dg~I~vwD~~tg~~i 757 (1915)
+. |++|++. +.....+.+ ...+.|..+...+++..+....+ .-++|+.||+.+++..
T Consensus 347 ~~~~l~v~~~~~~~~~~~~~~----------------p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 347 GSSRLRVYDLDDGKESREIPL----------------PEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp TEEEEEEEETT-TEEEEEEES----------------SSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred CccEEEEEECCCCcEEeeecC----------------CcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 43 6777777 322221111 11233455555555555444332 1346888888887654
No 463
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.79 E-value=2.6 Score=57.33 Aligned_cols=206 Identities=9% Similarity=0.005 Sum_probs=115.6
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEeCCCCC--------EEEEEEe----------------CCCCEEEEEeCCCcEE
Q psy9598 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGE--------ISDIAID----------------NRNILLAAGTVDKTIR 543 (1915)
Q Consensus 488 g~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~--------I~~Lafs----------------pdg~~LaSgs~DgtIr 543 (1915)
+..|+.++.++.|.-.|..||+.+..+.-.... ...+++. ..+..|+.++.|+.|.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 567888888999999999999999887532211 1122221 1344788888999999
Q ss_pred EEECCCCceEEEeecCCCCeE-------------EEEeccCccCCCcEEEEEeC----------CCeEEEEecccCcccc
Q psy9598 544 IWNLQTLAPISVLVGHQGIIT-------------GVNFCPLEVNGFNYLASTST----------DGCIGFWKYKLDIDIS 600 (1915)
Q Consensus 544 VWDl~tg~~~~~l~~h~~~V~-------------sl~fsp~~~~d~~~L~sgs~----------DgtI~iWDl~~~~~~~ 600 (1915)
-.|..+|+.+..+.. .+.|. .+.-.|.- .+..+++|+. +|.|+-+|..+++.+.
T Consensus 274 ALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V--~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W 350 (764)
T TIGR03074 274 ALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLV--AGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVW 350 (764)
T ss_pred EEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEE--ECCEEEEEecccccccccCCCcEEEEEECCCCcEee
Confidence 999999998877632 22211 11112211 1245666643 6899999999998776
Q ss_pred ceeccCcccc-----ccccCCCCCce-EEEEECCCCcEEEEEeCCC------------------eEEEEEecCCCCCcee
Q psy9598 601 KTVFHEPVMF-----NERIRPGNAHI-LCSSFSPGGLFLATGSGDH------------------HVRVYKMDGVDSPLGI 656 (1915)
Q Consensus 601 ~~~~~~~~~~-----~~~~~~~~~~V-~~l~fspdg~~Lasgs~Dg------------------~I~IwDl~~~~~~~~i 656 (1915)
......+... ...+..+...+ ..+++.+...+++.+..+. .|.-.|+. +....
T Consensus 351 ~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~---TGk~~ 427 (764)
T TIGR03074 351 AWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDAT---TGKER 427 (764)
T ss_pred EEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCC---CCceE
Confidence 6554321110 01111111122 3456666655555543322 23333332 11222
Q ss_pred EEecc--CC-------CCeeEEEEcC-CCC---EEEEEeCCCcEEEEEccCCceEE
Q psy9598 657 LEVEE--HS-------DKVDSIQWSH-SHL---RFVSGSRDGTALIWYYKCSQWRF 699 (1915)
Q Consensus 657 ~~l~~--h~-------~~V~sl~fsp-dg~---~L~sgs~DG~I~IWDl~~~~~~~ 699 (1915)
-.++. |. ....-+.+.. +|. .++.++.+|.+.+.|-.+++.+.
T Consensus 428 W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~ 483 (764)
T TIGR03074 428 WVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIV 483 (764)
T ss_pred EEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEe
Confidence 22221 11 0011112222 553 78899999999999999988654
No 464
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.78 E-value=0.17 Score=62.30 Aligned_cols=222 Identities=10% Similarity=0.074 Sum_probs=117.9
Q ss_pred eEEEEecccCccccceeccCccccccccCCCCCceEEE---EECCC----CcEEEEEeC----------CCeEEEEEecC
Q psy9598 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS---SFSPG----GLFLATGSG----------DHHVRVYKMDG 649 (1915)
Q Consensus 587 tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l---~fspd----g~~Lasgs~----------Dg~I~IwDl~~ 649 (1915)
.|++.|..+...+....+.. ...+.|+ .|..+ ..+|++|+. .|.|.+|++..
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~-----------~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~ 71 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEP-----------NEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISE 71 (321)
T ss_dssp EEEEEETTTSSEEEEEEEET-----------TEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECS
T ss_pred EEEEEeCCCCeEEEEEECCC-----------CceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEc
Confidence 56777776665544444331 1233333 33332 467777754 28999999954
Q ss_pred C-C--CCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCc-eEEeeecccccCCCCccccccccccccEE
Q psy9598 650 V-D--SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQ-WRFIRLDMNTCLPHTKETSDETNKKIKVT 725 (1915)
Q Consensus 650 ~-~--~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 725 (1915)
. . ............++|++|+-. +| +|+++. ++.|.+|++.... +..... ......++
T Consensus 72 ~~~~~~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~---------------~~~~~~i~ 133 (321)
T PF03178_consen 72 SPENNFKLKLIHSTEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAF---------------YDSPFYIT 133 (321)
T ss_dssp S-----EEEEEEEEEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEE---------------E-BSSSEE
T ss_pred ccccceEEEEEEEEeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhhe---------------ecceEEEE
Confidence 2 1 111222234557889999865 34 444443 4899999998877 333211 11122455
Q ss_pred EEEECCCCCEEEEEEecCCeEEEEECCC-CceEEEee--CCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCcc--c
Q psy9598 726 MVAWDASDRWVITAINFNFQIKIWDAFN-GDLVQVLK--GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ--R 800 (1915)
Q Consensus 726 ~va~spdg~~L~t~s~~Dg~I~vwD~~t-g~~i~~l~--gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~--~ 800 (1915)
++... +.+|++|.. -..|.++.... ...+..+. .....++++.|-+ ++..++.+..+|.|.++....... .
T Consensus 134 sl~~~--~~~I~vgD~-~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~-d~~~~i~~D~~gnl~~l~~~~~~~~~~ 209 (321)
T PF03178_consen 134 SLSVF--KNYILVGDA-MKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLV-DEDTIIVGDKDGNLFVLRYNPEIPNSR 209 (321)
T ss_dssp EEEEE--TTEEEEEES-SSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE--SSSEEEEEETTSEEEEEEE-SS-SSTT
T ss_pred EEecc--ccEEEEEEc-ccCEEEEEEEccCCEEEEEEecCCCccEEEEEEec-CCcEEEEEcCCCeEEEEEECCCCcccc
Confidence 55544 568888877 55566553332 22222222 2344688888886 446999999999999998863211 0
Q ss_pred cce-eeeeeecCCCCcceEEE---EEcC--CC------CEEEEEeCCCeEEEE
Q psy9598 801 GYK-WFHNIVEGQGEGALFDG---KWSP--DG------TTCALTDSYGHLLVY 841 (1915)
Q Consensus 801 ~~~-~~~~~~~~~~~~~V~~v---afSp--dg------~~Lasg~~dG~I~Iw 841 (1915)
... .+......+....|+++ ++.| .+ ..++.++.+|.|.+.
T Consensus 210 ~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 210 DGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp TTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred cccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 000 11111112233456665 5455 22 248888889988733
No 465
>KOG4640|consensus
Probab=96.66 E-value=0.0064 Score=75.89 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=78.1
Q ss_pred CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEE-EEEEeCCCCEEEEEeCCCcEEEEECCCCceEEE
Q psy9598 477 SAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS-DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~-~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~ 555 (1915)
..|.-+.|+|.-.+||++..+|.|.+..+. .+.+.++.-|...++ +++|.|||++||.|-.||+|++.|+.++..+..
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 567789999999999999999999999987 888889988888888 999999999999999999999999999877655
Q ss_pred e-ecCCCCeEEEEecc
Q psy9598 556 L-VGHQGIITGVNFCP 570 (1915)
Q Consensus 556 l-~~h~~~V~sl~fsp 570 (1915)
. ..-...|.++-|.+
T Consensus 100 ~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 100 FLFSVETDISKGIWDR 115 (665)
T ss_pred cccccccchheeeccc
Confidence 3 12334566666653
No 466
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.55 E-value=0.13 Score=65.07 Aligned_cols=168 Identities=18% Similarity=0.115 Sum_probs=97.6
Q ss_pred CcEEEEEeCCCCCEEEEEEeCCCCEEEEEe---CC-CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEe
Q psy9598 508 GKLLATLRGCSGEISDIAIDNRNILLAAGT---VD-KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 583 (1915)
Q Consensus 508 g~~~~~l~gH~~~I~~Lafspdg~~LaSgs---~D-gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs 583 (1915)
|.....+..-...+..-+|++++..|+-.+ .. ..|.++++.++.....+. ..+.-...+|+|++ ..++++..
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG---~~l~f~~~ 257 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDG---SKLAFSSS 257 (425)
T ss_pred CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCC---CEEEEEEC
Confidence 444445554556677788999988766543 22 469999999887654443 23333566899954 46677777
Q ss_pred CCCeEEEE--ecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeC-CCe--EEEEEecCCCCCceeEE
Q psy9598 584 TDGCIGFW--KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG-DHH--VRVYKMDGVDSPLGILE 658 (1915)
Q Consensus 584 ~DgtI~iW--Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~-Dg~--I~IwDl~~~~~~~~i~~ 658 (1915)
.||...|| |+.+.... .+ ....+.-..=+|+|+|+.|+..+. .|. |.++++.+.. ....+
T Consensus 258 rdg~~~iy~~dl~~~~~~-~L------------t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~--~~riT 322 (425)
T COG0823 258 RDGSPDIYLMDLDGKNLP-RL------------TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ--VTRLT 322 (425)
T ss_pred CCCCccEEEEcCCCCcce-ec------------ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc--eeEee
Confidence 88876655 55544311 11 111122235689999998876654 454 4444543322 22222
Q ss_pred eccCCCCeeEEEEcCCCCEEEEEeCC-Cc--EEEEEccCCc
Q psy9598 659 VEEHSDKVDSIQWSHSHLRFVSGSRD-GT--ALIWYYKCSQ 696 (1915)
Q Consensus 659 l~~h~~~V~sl~fspdg~~L~sgs~D-G~--I~IWDl~~~~ 696 (1915)
..+.. -..-.|+|+|.+|+..+.. |. |.+.|+.++.
T Consensus 323 ~~~~~--~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 323 FSGGG--NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred ccCCC--CcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 32222 2266799999998877643 44 5555554443
No 467
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.49 E-value=0.39 Score=60.98 Aligned_cols=202 Identities=17% Similarity=0.157 Sum_probs=109.7
Q ss_pred cEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEE---eCC-CeEEEEecccCccccceeccCccccccccCC
Q psy9598 541 TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST---STD-GCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616 (1915)
Q Consensus 541 tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sg---s~D-gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~ 616 (1915)
.+.+-|.. |.....+......+..-.|+|++ ..++.. ... ..+.++++.++.......+.
T Consensus 174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~----~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~----------- 237 (425)
T COG0823 174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDG----KKLAYVSFELGGCPRIYYLDLNTGKRPVILNFN----------- 237 (425)
T ss_pred eEEEEccC-CcceeEecccCcceeccccCcCC----CceEEEEEecCCCceEEEEeccCCccceeeccC-----------
Confidence 34444443 55555555555567777888854 333322 222 46889999888654333322
Q ss_pred CCCceEEEEECCCCcEEEEE-eCCCe--EEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE-eCCCcEEEE--
Q psy9598 617 GNAHILCSSFSPGGLFLATG-SGDHH--VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG-SRDGTALIW-- 690 (1915)
Q Consensus 617 ~~~~V~~l~fspdg~~Lasg-s~Dg~--I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg-s~DG~I~IW-- 690 (1915)
+.-..-+|+|||+.|+.. ..||. |.++|+.+.. ...+....+.-..=.|+|+|+.++-. +..|.-.||
T Consensus 238 --g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~----~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~ 311 (425)
T COG0823 238 --GNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN----LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLY 311 (425)
T ss_pred --CccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc----ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEE
Confidence 333456899999876654 45665 4555654333 12232222323355699999977654 455665555
Q ss_pred EccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCe--EEEEECCCCceEEEeeCCCCCeE
Q psy9598 691 YYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ--IKIWDAFNGDLVQVLKGHTNEVF 768 (1915)
Q Consensus 691 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~--I~vwD~~tg~~i~~l~gH~~~V~ 768 (1915)
++.......+.. ....-..-.|+|+|.+|+..+..+|. |.+.|+.++..+..+. +.....
T Consensus 312 ~~~g~~~~riT~-----------------~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e 373 (425)
T COG0823 312 DLEGSQVTRLTF-----------------SGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNE 373 (425)
T ss_pred CCCCCceeEeec-----------------cCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCC
Confidence 444443222111 11111156799999999988753444 6666766655444443 222233
Q ss_pred EEEEccCCCCEEEEE
Q psy9598 769 VLESHPFDSRVLLSA 783 (1915)
Q Consensus 769 sl~~sp~dg~~LaSg 783 (1915)
.-+|.+ ++..++..
T Consensus 374 ~ps~~~-ng~~i~~~ 387 (425)
T COG0823 374 SPSWAP-NGRMIMFS 387 (425)
T ss_pred CCCcCC-CCceEEEe
Confidence 344566 55555443
No 468
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.45 E-value=0.13 Score=51.63 Aligned_cols=104 Identities=13% Similarity=0.266 Sum_probs=73.3
Q ss_pred EEEEEEcC---CC-CEEEEEECCCcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEE
Q psy9598 479 VFCVLFDK---LG-EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS 554 (1915)
Q Consensus 479 V~~vafsp---dg-~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~ 554 (1915)
|+++++.. +| .-|++||.|..|+||+- ..++..+. -++.|++|+-... ..++.|..+|+|-||+-. ..+.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceee
Confidence 66776653 32 67999999999999994 36777766 3467888877666 568888999999999752 3334
Q ss_pred EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEE
Q psy9598 555 VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589 (1915)
Q Consensus 555 ~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~ 589 (1915)
.+.. ...++++++....-++..-|++|-.+|.|-
T Consensus 76 RiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 76 RIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 4443 234777777765434456789999888764
No 469
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=96.38 E-value=2.9 Score=48.64 Aligned_cols=312 Identities=14% Similarity=0.060 Sum_probs=0.0
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEeCCC-CCEEEEEEeCCCCEEEEEeCCCcEEEEECC--CCceEEEeecCCCCeEEE
Q psy9598 490 VIVTGADDLLIKLWRARDGKLLATLRGCS-GEISDIAIDNRNILLAAGTVDKTIRIWNLQ--TLAPISVLVGHQGIITGV 566 (1915)
Q Consensus 490 ~LaTGs~Dg~I~IWd~~tg~~~~~l~gH~-~~I~~Lafspdg~~LaSgs~DgtIrVWDl~--tg~~~~~l~~h~~~V~sl 566 (1915)
.+++|+.+|.- ..-..-..+-||- ..|..+.....-.++..|-.=-.+-+|+.. +.-.+...-.-.+.+..+
T Consensus 18 v~It~s~~gva-----~d~~v~~~~vghfg~~vsavdv~~~ya~v~qG~~l~i~ditn~~~~t~~~l~~~i~~~~l~~Dv 92 (370)
T COG5276 18 VLITGSDDGVA-----VDVHVGYAYVGHFGKGVSAVDVRGAYAYVGQGFILAILDITNVSLQTHDVLLSVINARDLFADV 92 (370)
T ss_pred EEEecccccee-----eccccceEEeeeccCCcccccccccccccccCceEeeccccCcccccCcceEEEEehhhhhhee
Q ss_pred EeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEE
Q psy9598 567 NFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 646 (1915)
Q Consensus 567 ~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwD 646 (1915)
.++. ++.+.+..+.-++|.|+.+........+- ...-+.-.|.-.|++..++..+.-+.+.|
T Consensus 93 ~vse------~yvyvad~ssGL~IvDIS~P~sP~~~~~l------------nt~gyaygv~vsGn~aYVadlddgfLivd 154 (370)
T COG5276 93 RVSE------EYVYVADWSSGLRIVDISTPDSPTLIGFL------------NTDGYAYGVYVSGNYAYVADLDDGFLIVD 154 (370)
T ss_pred Eecc------cEEEEEcCCCceEEEeccCCCCcceeccc------------cCCceEEEEEecCCEEEEeeccCcEEEEE
Q ss_pred ecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEE
Q psy9598 647 MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTM 726 (1915)
Q Consensus 647 l~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 726 (1915)
+.....+............-..++.| |++...+..|+-+.|-|+.... .+...........+.+
T Consensus 155 vsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~--------------sPvli~~~n~g~g~~s 218 (370)
T COG5276 155 VSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPH--------------SPVLIGSYNTGPGTYS 218 (370)
T ss_pred CCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCC--------------CCeEEEEEecCCceEE
Q ss_pred EEECCCCCEEEEEEecCCeEEEEECCCCceEEEee-CCCCCeEEEEEccCCCCEEEEEecCceEEEEECCCCccccceee
Q psy9598 727 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK-GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805 (1915)
Q Consensus 727 va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~-gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~ 805 (1915)
+..+++-.+++.. +--+.+-|..+......+. -....+.++.--+..+.+...+..+.-+-+-|+.+... ....
T Consensus 219 v~vsdnr~y~vvy---~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~s--pfl~ 293 (370)
T COG5276 219 VSVSDNRAYLVVY---DEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNPPS--PFLS 293 (370)
T ss_pred EEecCCeeEEEEc---ccceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCCCC--Cchh
Q ss_pred eeeecCCCCcc-------------------------------------eEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9598 806 HNIVEGQGEGA-------------------------------------LFDGKWSPDGTTCALTDSYGHLLVYGLGG 845 (1915)
Q Consensus 806 ~~~~~~~~~~~-------------------------------------V~~vafSpdg~~Lasg~~dG~I~Iwdl~s 845 (1915)
........... +.+++.+-+.+.+.+.+.+|-+.||+..+
T Consensus 294 ss~~t~g~~a~gi~ay~~y~yiadkn~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~~~ 370 (370)
T COG5276 294 SSLDTAGYQAAGIRAYGNYNYIADKNTGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEYLG 370 (370)
T ss_pred ccccCCCccccceEEecCeeEeccCCceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEecC
No 470
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.38 E-value=0.0077 Score=46.80 Aligned_cols=39 Identities=36% Similarity=0.729 Sum_probs=35.3
Q ss_pred CcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Q psy9598 508 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546 (1915)
Q Consensus 508 g~~~~~l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWD 546 (1915)
+.++..+.+|...|.++.|++.+.++++|+.|+.|++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456777888999999999999999999999999999996
No 471
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.35 E-value=0.051 Score=72.39 Aligned_cols=135 Identities=12% Similarity=0.084 Sum_probs=90.0
Q ss_pred ECCCcEEEEECCCCcEEEEEeCCCCC-EEEEEEeC-----CCCEEEEEeCCCcEEEEECCCCc-eEEEeec----CCCCe
Q psy9598 495 ADDLLIKLWRARDGKLLATLRGCSGE-ISDIAIDN-----RNILLAAGTVDKTIRIWNLQTLA-PISVLVG----HQGII 563 (1915)
Q Consensus 495 s~Dg~I~IWd~~tg~~~~~l~gH~~~-I~~Lafsp-----dg~~LaSgs~DgtIrVWDl~tg~-~~~~l~~----h~~~V 563 (1915)
.....|.-.|+..|+.+..+..|... |.+++-.. ++.-.+.|-.+..|..||.+-.. .+..-.. .....
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence 34578899999999999999887754 66665321 12345567778899999997532 2211112 23345
Q ss_pred EEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEE
Q psy9598 564 TGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVR 643 (1915)
Q Consensus 564 ~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~ 643 (1915)
+|++-+. ..+||+|+.+|.|++||-- +.. . ...+.+-..+|.+|..+.||++|++.+.. .|.
T Consensus 581 s~~aTt~-----~G~iavgs~~G~IRLyd~~-g~~-A----------KT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLl 642 (794)
T PF08553_consen 581 SCFATTE-----DGYIAVGSNKGDIRLYDRL-GKR-A----------KTALPGLGDPIIGIDVTADGKWILATCKT-YLL 642 (794)
T ss_pred eEEEecC-----CceEEEEeCCCcEEeeccc-chh-h----------hhcCCCCCCCeeEEEecCCCcEEEEeecc-eEE
Confidence 6665544 4699999999999999832 211 1 11122335889999999999998877654 566
Q ss_pred EEEe
Q psy9598 644 VYKM 647 (1915)
Q Consensus 644 IwDl 647 (1915)
|++.
T Consensus 643 Li~t 646 (794)
T PF08553_consen 643 LIDT 646 (794)
T ss_pred EEEE
Confidence 6665
No 472
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.33 E-value=0.0079 Score=46.74 Aligned_cols=37 Identities=32% Similarity=0.444 Sum_probs=33.2
Q ss_pred eeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy9598 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 504 (1915)
Q Consensus 468 ~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd 504 (1915)
....+.+|...|+++.|++.+.++++|+.|+.|++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3456678999999999999999999999999999996
No 473
>KOG3630|consensus
Probab=96.25 E-value=0.044 Score=72.49 Aligned_cols=147 Identities=14% Similarity=0.014 Sum_probs=92.1
Q ss_pred CCEEEEEEeCCCCEEEEEe--CCCcEEEEECCCCceE-----EEe------ecCCCCeEEEEeccCccCCCcEEEEEeCC
Q psy9598 519 GEISDIAIDNRNILLAAGT--VDKTIRIWNLQTLAPI-----SVL------VGHQGIITGVNFCPLEVNGFNYLASTSTD 585 (1915)
Q Consensus 519 ~~I~~Lafspdg~~LaSgs--~DgtIrVWDl~tg~~~-----~~l------~~h~~~V~sl~fsp~~~~d~~~L~sgs~D 585 (1915)
-.|..+.+++|+...++.. .+-.|.+||+.+.... ..| ......+.++.|+|.-+ ...+.+..|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp---~n~av~l~d 177 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVP---LNSAVDLSD 177 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCcc---chhhhhccc
Confidence 3566777778876555443 3447899999753221 111 12234567888998653 566777888
Q ss_pred CeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEecc-CCC
Q psy9598 586 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE-HSD 664 (1915)
Q Consensus 586 gtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~-h~~ 664 (1915)
+.|++..+....... ...+-...++|++|+|.|..+++|-..|++.-|-... .....+..... ...
T Consensus 178 lsl~V~~~~~~~~~v------------~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~y 244 (1405)
T KOG3630|consen 178 LSLRVKSTKQLAQNV------------TSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENY 244 (1405)
T ss_pred cchhhhhhhhhhhhh------------cccCcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcCCCc
Confidence 888887654321100 0012336789999999999999999999999887632 11111111111 147
Q ss_pred CeeEEEEcCCCCEEEEE
Q psy9598 665 KVDSIQWSHSHLRFVSG 681 (1915)
Q Consensus 665 ~V~sl~fspdg~~L~sg 681 (1915)
.|.+|+|-....+|++-
T Consensus 245 rvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 245 RVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred ceeEEEEecceeEEEEe
Confidence 79999998777666654
No 474
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.13 E-value=0.91 Score=52.99 Aligned_cols=176 Identities=10% Similarity=0.067 Sum_probs=114.9
Q ss_pred EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecC-CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEe
Q psy9598 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592 (1915)
Q Consensus 514 l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h-~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWD 592 (1915)
+.|-...|.+|.|+|+.+.|++......-.||=...|..+.++.-. -...-.|.|.- ++.+.++--.++.+.++.
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig----~n~fvi~dER~~~l~~~~ 156 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIG----GNQFVIVDERDRALYLFT 156 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEec----CCEEEEEehhcceEEEEE
Confidence 3455666999999999999999998888888888889988876421 23345666664 557777777889998888
Q ss_pred cccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC-------CC
Q psy9598 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS-------DK 665 (1915)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~-------~~ 665 (1915)
+............ ... .......+...-.++|+|....|+.+-.-.-+.||.+........+.....+. ..
T Consensus 157 vd~~t~~~~~~~~-~i~-L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~D 234 (316)
T COG3204 157 VDADTTVISAKVQ-KIP-LGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLD 234 (316)
T ss_pred EcCCccEEeccce-EEe-ccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeec
Confidence 7766432222110 011 11111225667889999998888888888888888875433233222222222 34
Q ss_pred eeEEEEcCC-CCEEEEEeCCCcEEEEEccCC
Q psy9598 666 VDSIQWSHS-HLRFVSGSRDGTALIWYYKCS 695 (1915)
Q Consensus 666 V~sl~fspd-g~~L~sgs~DG~I~IWDl~~~ 695 (1915)
|.++.|++. +.+|+-+..++.+.-.|....
T Consensus 235 vSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 235 VSGLEFNAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred cccceecCCCCcEEEEecCCceEEEEecCCC
Confidence 677778764 456666667777777666544
No 475
>KOG2444|consensus
Probab=96.03 E-value=0.0067 Score=67.48 Aligned_cols=144 Identities=12% Similarity=0.104 Sum_probs=78.8
Q ss_pred EEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCC
Q psy9598 632 FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHT 711 (1915)
Q Consensus 632 ~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~ 711 (1915)
.|...+.+|.|+-++++... .....-..|... . ....-+..+++|+.+|.|.+|........
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k--~s~rse~~~~e~-~--~v~~~~~~~~vG~~dg~v~~~n~n~~g~~------------- 93 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHK--ESCRSERFIDEG-Q--RVVTASAKLMVGTSDGAVYVFNWNLEGAH------------- 93 (238)
T ss_pred hhccccCCcccccchhhhhh--hhhhhhhhhhcc-e--eecccCceEEeecccceEEEecCCccchH-------------
Confidence 34455677777777763211 000111111111 1 11223457999999999999976521100
Q ss_pred ccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCC-CCeEEEEEccCCCCEEEEE--ecCce
Q psy9598 712 KETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT-NEVFVLESHPFDSRVLLSA--GHDGL 788 (1915)
Q Consensus 712 ~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~-~~V~sl~~sp~dg~~LaSg--s~DG~ 788 (1915)
............+.|.-..++.+..+++. +|.|+.|++.-++.+.....|. .++..+..+. .+.+|+.+ |.|..
T Consensus 94 -~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~-dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~-sd~~i~~a~~S~d~~ 170 (238)
T KOG2444|consen 94 -SDRVCSGEESIDLGIPNGRDSSLGCVGAQ-DGRIRACNIKPNKVLGYVGQHNFESGEELIVVG-SDEFLKIADTSHDRV 170 (238)
T ss_pred -HHhhhcccccceeccccccccceeEEecc-CCceeeeccccCceeeeeccccCCCcceeEEec-CCceEEeeccccchh
Confidence 00001111222333333344556666666 9999999999888888887777 4444444444 45556555 66666
Q ss_pred EEEEECCC
Q psy9598 789 IIIWDILS 796 (1915)
Q Consensus 789 I~IWdl~s 796 (1915)
++.|++..
T Consensus 171 ~k~W~ve~ 178 (238)
T KOG2444|consen 171 LKKWNVEK 178 (238)
T ss_pred hhhcchhh
Confidence 66666643
No 476
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.03 E-value=6.8 Score=49.50 Aligned_cols=306 Identities=12% Similarity=0.084 Sum_probs=149.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCc--eEEEe--ecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccce--e
Q psy9598 530 NILLAAGTVDKTIRIWNLQTLA--PISVL--VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--V 603 (1915)
Q Consensus 530 g~~LaSgs~DgtIrVWDl~tg~--~~~~l--~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~--~ 603 (1915)
...|++||..|.++||+..... ....+ ..-..+|..|..-....+.....++.=.-..+.+|.+......... .
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~ 116 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQ 116 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcE
Confidence 4589999999999999985433 11111 1234677777765532222333444455667888877332211000 0
Q ss_pred ccCccccccccCCCCCceEEEEECC-C-CcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEE
Q psy9598 604 FHEPVMFNERIRPGNAHILCSSFSP-G-GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 681 (1915)
Q Consensus 604 ~~~~~~~~~~~~~~~~~V~~l~fsp-d-g~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sg 681 (1915)
......+...+........+..|-. . ..+|.+-+.||.+.+|+-+. ......+.. .--...|+|++....|+++
T Consensus 117 ~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~---~~f~~~lp~-~llPgPl~Y~~~tDsfvt~ 192 (418)
T PF14727_consen 117 YQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES---FAFSRFLPD-FLLPGPLCYCPRTDSFVTA 192 (418)
T ss_pred EEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc---EEEEEEcCC-CCCCcCeEEeecCCEEEEe
Confidence 0000011111111111122222222 1 35788889999999998632 111112222 2223456788888899999
Q ss_pred eCCCcEEEEEccCCceEEeeec-----ccccCCCCccc----cccccccccEEEEEECCCCCEEEEEEecCCeEEEEECC
Q psy9598 682 SRDGTALIWYYKCSQWRFIRLD-----MNTCLPHTKET----SDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752 (1915)
Q Consensus 682 s~DG~I~IWDl~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~ 752 (1915)
+.+..+..|.+..-........ ........... .........|..+.++.....|++-+ ..++.+.+.
T Consensus 193 sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLg--er~Lf~l~~- 269 (418)
T PF14727_consen 193 SSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLG--ERSLFCLKD- 269 (418)
T ss_pred cCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEe--cceEEEEcC-
Confidence 9999999987643211000000 00000000000 00111222344444544444444444 467777765
Q ss_pred CCceEEEeeCCCCCeEEEE-E------ccCCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCC
Q psy9598 753 NGDLVQVLKGHTNEVFVLE-S------HPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPD 825 (1915)
Q Consensus 753 tg~~i~~l~gH~~~V~sl~-~------sp~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpd 825 (1915)
+|.+....+- .....+++ | .+.....++.++.++++.||.=.+ +.+-.. + ....-+|.-..|..-
T Consensus 270 ~G~l~~~krL-d~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~-----L~WsA~-l-~~~PVal~v~~~~~~ 341 (418)
T PF14727_consen 270 NGSLRFQKRL-DYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTT-----LVWSAQ-L-PHVPVALSVANFNGL 341 (418)
T ss_pred CCeEEEEEec-CCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCe-----EEEecC-C-CCCCEEEEecccCCC
Confidence 4654444332 22222222 1 121123588899999999986432 222110 0 011112233334444
Q ss_pred CCEEEEEeCCCeEEEEeCCCCcccc
Q psy9598 826 GTTCALTDSYGHLLVYGLGGFKRPQ 850 (1915)
Q Consensus 826 g~~Lasg~~dG~I~Iwdl~s~~~~~ 850 (1915)
...|++-+.+|+|.+-=+++.-...
T Consensus 342 ~G~IV~Ls~~G~L~v~YLGTdPs~~ 366 (418)
T PF14727_consen 342 KGLIVSLSDEGQLSVSYLGTDPSLF 366 (418)
T ss_pred CceEEEEcCCCcEEEEEeCCCCccc
Confidence 5678888889999888777654333
No 477
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.01 E-value=1.4 Score=54.59 Aligned_cols=241 Identities=7% Similarity=0.008 Sum_probs=103.7
Q ss_pred CCCEEEEEE-CCCcEEEEECCC----CcEEEEEeC---CC----CCEEEEEEeCCCCEEEEEeC------CCcEEEEECC
Q psy9598 487 LGEVIVTGA-DDLLIKLWRARD----GKLLATLRG---CS----GEISDIAIDNRNILLAAGTV------DKTIRIWNLQ 548 (1915)
Q Consensus 487 dg~~LaTGs-~Dg~I~IWd~~t----g~~~~~l~g---H~----~~I~~Lafspdg~~LaSgs~------DgtIrVWDl~ 548 (1915)
..++|+..+ ..+.|.|+|+.+ -++.+++.. +. +.-..+..-|+|.+++|+-. -|-+.+.|-.
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 457777777 568999999874 355666542 11 12233444578888888633 2468888888
Q ss_pred CCceEEEeecCC---CCeEEEEeccCccCCCcEEEEEe--------------------CCCeEEEEecccCccccceecc
Q psy9598 549 TLAPISVLVGHQ---GIITGVNFCPLEVNGFNYLASTS--------------------TDGCIGFWKYKLDIDISKTVFH 605 (1915)
Q Consensus 549 tg~~~~~l~~h~---~~V~sl~fsp~~~~d~~~L~sgs--------------------~DgtI~iWDl~~~~~~~~~~~~ 605 (1915)
+........... ..-..+-|.|.. +.++|.. ...++.+||+.+.+.++.+.+.
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~----nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg 241 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRH----NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLG 241 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTT----TEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-
T ss_pred cccccceeccCCCCCCCCCCeEEcCCC----CEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecC
Confidence 877776665322 233456666633 6666654 2458999999998877766654
Q ss_pred CccccccccCCCCCceEEEEECCC--CcEEEEE-eCCCeEEEEEecCCCC--CceeEEecc-----------------CC
Q psy9598 606 EPVMFNERIRPGNAHILCSSFSPG--GLFLATG-SGDHHVRVYKMDGVDS--PLGILEVEE-----------------HS 663 (1915)
Q Consensus 606 ~~~~~~~~~~~~~~~V~~l~fspd--g~~Lasg-s~Dg~I~IwDl~~~~~--~~~i~~l~~-----------------h~ 663 (1915)
.. ......+.|..+ ..+=++| -..++|..|--..... ...+..+.. -.
T Consensus 242 ~~----------g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P 311 (461)
T PF05694_consen 242 EE----------GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVP 311 (461)
T ss_dssp TT----------EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE-
T ss_pred CC----------CCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCC
Confidence 21 122344555433 3332222 2333444443311111 112222211 13
Q ss_pred CCeeEEEEcCCCCEEEEEe-CCCcEEEEEccCCceEEeee--cccccCCC-CccccccccccccEEEEEECCCCCEEEEE
Q psy9598 664 DKVDSIQWSHSHLRFVSGS-RDGTALIWYYKCSQWRFIRL--DMNTCLPH-TKETSDETNKKIKVTMVAWDASDRWVITA 739 (1915)
Q Consensus 664 ~~V~sl~fspdg~~L~sgs-~DG~I~IWDl~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~V~~va~spdg~~L~t~ 739 (1915)
.-|+.|.+|.|.++|+.++ .+|.|+.||+.....-...- .+...... ...........+...+|..|.||+.|+++
T Consensus 312 ~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvT 391 (461)
T PF05694_consen 312 PLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVT 391 (461)
T ss_dssp -----EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE
T ss_pred CceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEE
Confidence 4578999999999887555 78999999998654222111 11111100 00111112234556889999999999988
Q ss_pred Ee
Q psy9598 740 IN 741 (1915)
Q Consensus 740 s~ 741 (1915)
.+
T Consensus 392 nS 393 (461)
T PF05694_consen 392 NS 393 (461)
T ss_dssp --
T ss_pred ee
Confidence 65
No 478
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.89 E-value=1.3 Score=53.90 Aligned_cols=231 Identities=11% Similarity=-0.019 Sum_probs=123.4
Q ss_pred EEeCCCC-EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCcccccee
Q psy9598 525 AIDNRNI-LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603 (1915)
Q Consensus 525 afspdg~-~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~ 603 (1915)
.|.++.. ++.+--..+.|.-|+..++.... +. +.+.+.++.... .+..|+++.. | +.+++..++.....+.
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~-~~-~p~~~~~~~~~d----~~g~Lv~~~~-g-~~~~~~~~~~~~t~~~ 102 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGKKRV-FP-SPGGFSSGALID----AGGRLIACEH-G-VRLLDPDTGGKITLLA 102 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCceEE-EE-CCCCcccceeec----CCCeEEEEcc-c-cEEEeccCCceeEEec
Confidence 4556655 44555567788888887664322 22 223334444333 2234444443 3 4556654443211111
Q ss_pred ccCccccccccCCCCCceEEEEECCCCcEEEEEeC---------CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCC
Q psy9598 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG---------DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS 674 (1915)
Q Consensus 604 ~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~---------Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspd 674 (1915)
.. .. .......+.+.+.|+|.+-++... -..-.||-++. ....+..+..|-..-++|+|||+
T Consensus 103 ~~--~~-----~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p--~g~~~~l~~~~~~~~NGla~SpD 173 (307)
T COG3386 103 EP--ED-----GLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP--DGGVVRLLDDDLTIPNGLAFSPD 173 (307)
T ss_pred cc--cC-----CCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC--CCCEEEeecCcEEecCceEECCC
Confidence 00 00 001134566778888876555433 01124555531 12233334455556678999999
Q ss_pred CCEEEEEeCC-CcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC-eEEEEECC
Q psy9598 675 HLRFVSGSRD-GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF-QIKIWDAF 752 (1915)
Q Consensus 675 g~~L~sgs~D-G~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg-~I~vwD~~ 752 (1915)
++.|+.+... +.|.-|++..... ...............+..-.++.+.+|.+.+++.. +| .|.+|+..
T Consensus 174 g~tly~aDT~~~~i~r~~~d~~~g---------~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~-~g~~v~~~~pd 243 (307)
T COG3386 174 GKTLYVADTPANRIHRYDLDPATG---------PIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVW-GGGRVVRFNPD 243 (307)
T ss_pred CCEEEEEeCCCCeEEEEecCcccC---------ccCCcceEEEccCCCCCCCceEEeCCCCEEEeccc-CCceEEEECCC
Confidence 9877776544 7777776653110 00000001111112344455778888888866555 44 89999988
Q ss_pred CCceEEEeeCCCCCeEEEEEccCCCCEEEEE
Q psy9598 753 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783 (1915)
Q Consensus 753 tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSg 783 (1915)
|+++..+..+...+++++|--.+.+.|+..
T Consensus 244 -G~l~~~i~lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 244 -GKLLGEIKLPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred -CcEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence 999999988777788888865344444333
No 479
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=95.89 E-value=0.27 Score=49.43 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=69.2
Q ss_pred CeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCe
Q psy9598 562 IITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 641 (1915)
Q Consensus 562 ~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~ 641 (1915)
.|++++++.....+.+.|++||.|..|++|+-..- +..+. ....|++++-... ..++.|..+|+
T Consensus 1 ~V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~--~~Ei~-------------e~~~v~~L~~~~~-~~F~Y~l~NGT 64 (111)
T PF14783_consen 1 NVTALCLFDFDGDGENELLVGSDDFEIRVFKGDEI--VAEIT-------------ETDKVTSLCSLGG-GRFAYALANGT 64 (111)
T ss_pred CeeEEEEEecCCCCcceEEEecCCcEEEEEeCCcE--EEEEe-------------cccceEEEEEcCC-CEEEEEecCCE
Confidence 37888888765445689999999999999974321 11221 1266777777766 46888999999
Q ss_pred EEEEEecCCCCCceeEEeccCCCCeeEEEEc-CCC---CEEEEEeCCCcEE
Q psy9598 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-HSH---LRFVSGSRDGTAL 688 (1915)
Q Consensus 642 I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fs-pdg---~~L~sgs~DG~I~ 688 (1915)
|-+|+-. ..+....... .+.++++. .++ ..|++|-.+|.|-
T Consensus 65 VGvY~~~-----~RlWRiKSK~-~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 65 VGVYDRS-----QRLWRIKSKN-QVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEEEeCc-----ceeeeeccCC-CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 9999751 2233333333 35666543 332 2688998888764
No 480
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.80 E-value=2.8 Score=51.81 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=46.7
Q ss_pred EEEeeCCCCCeEEEEEcc------CCCCEEEEEecCceEEEEECCCCccccceeeeeeecCCCCcceEEEEEcCCCCEEE
Q psy9598 757 VQVLKGHTNEVFVLESHP------FDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830 (1915)
Q Consensus 757 i~~l~gH~~~V~sl~~sp------~dg~~LaSgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~V~~vafSpdg~~La 830 (1915)
+..+..| ..+..+.|.. ..+.+|++.-..+.|....+..+.. +.....++ ......+.++++.|||.+++
T Consensus 246 ~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~-~~~~~r~~~v~~~pDG~Lyv 321 (331)
T PF07995_consen 246 VFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGS--VTEEEEFL-GGFGGRPRDVAQGPDGALYV 321 (331)
T ss_dssp SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEE--EEEEEEEC-TTSSS-EEEEEEETTSEEEE
T ss_pred ceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCC--ccceEEcc-ccCCCCceEEEEcCCCeEEE
Confidence 3444444 4466666653 1345666655567787777764433 22222222 33345799999999999999
Q ss_pred EEeCCCeEE
Q psy9598 831 LTDSYGHLL 839 (1915)
Q Consensus 831 sg~~dG~I~ 839 (1915)
+.+.+|.|+
T Consensus 322 ~~d~~G~iy 330 (331)
T PF07995_consen 322 SDDSDGKIY 330 (331)
T ss_dssp EE-TTTTEE
T ss_pred EECCCCeEe
Confidence 999888875
No 481
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=95.75 E-value=1.7 Score=51.23 Aligned_cols=219 Identities=16% Similarity=0.154 Sum_probs=126.3
Q ss_pred CcEEEEEEcCCCCEEEEEECCCcEEEEECC------CC-cEEEEEeC-----CCCCEEEEEEeCCCCE------------
Q psy9598 477 SAVFCVLFDKLGEVIVTGADDLLIKLWRAR------DG-KLLATLRG-----CSGEISDIAIDNRNIL------------ 532 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~Dg~I~IWd~~------tg-~~~~~l~g-----H~~~I~~Lafspdg~~------------ 532 (1915)
-.-+.|+|+|.+.+-++....+...+||.. .. .++-++.+ ..+..+.+.|+....+
T Consensus 23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred cccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 345789999999988888888999999986 12 23444442 2346788888754333
Q ss_pred EEEEeCCCcEEEEECCCCce-----EEEee-cCCCCe-EEEEeccCccCCCcEEEEE-eCCCeEEEEecccCccccceec
Q psy9598 533 LAAGTVDKTIRIWNLQTLAP-----ISVLV-GHQGII-TGVNFCPLEVNGFNYLAST-STDGCIGFWKYKLDIDISKTVF 604 (1915)
Q Consensus 533 LaSgs~DgtIrVWDl~tg~~-----~~~l~-~h~~~V-~sl~fsp~~~~d~~~L~sg-s~DgtI~iWDl~~~~~~~~~~~ 604 (1915)
++.++.||+|.-|...-+.. ...+. +..+.| ..+++.... .+.+|+.+ -..+.|-+||-.-......-.+
T Consensus 103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~--~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F 180 (336)
T TIGR03118 103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTG--GGDYLYAANFRQGRIDVFKGSFRPPPLPGSF 180 (336)
T ss_pred EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecC--CCceEEEeccCCCceEEecCccccccCCCCc
Confidence 56678899999998643222 12222 112333 356666432 23444444 4678999998544322111111
Q ss_pred cCcc------ccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC-----
Q psy9598 605 HEPV------MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH----- 673 (1915)
Q Consensus 605 ~~~~------~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp----- 673 (1915)
..+. .+........-.|+-..-.+++..=+.|..-|.|-+||+.+. ......-.+.-..-+.|+..|
T Consensus 181 ~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~--l~~r~as~g~LNaPWG~a~APa~FG~ 258 (336)
T TIGR03118 181 IDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQ--LLRRVASSGRLNAPWGLAIAPESFGS 258 (336)
T ss_pred cCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCc--EEEEeccCCcccCCceeeeChhhhCC
Confidence 1110 001111112222333333444444555666789999998431 111112234445567777755
Q ss_pred -CCCEEEEEeCCCcEEEEEccCCceEE
Q psy9598 674 -SHLRFVSGSRDGTALIWYYKCSQWRF 699 (1915)
Q Consensus 674 -dg~~L~sgs~DG~I~IWDl~~~~~~~ 699 (1915)
.|.+|+---.||+|..||..++.++-
T Consensus 259 ~sg~lLVGNFGDG~InaFD~~sG~~~g 285 (336)
T TIGR03118 259 LSGALLVGNFGDGTINAYDPQSGAQLG 285 (336)
T ss_pred CCCCeEEeecCCceeEEecCCCCceee
Confidence 46788888899999999998887554
No 482
>PRK10115 protease 2; Provisional
Probab=95.69 E-value=11 Score=51.58 Aligned_cols=113 Identities=7% Similarity=-0.049 Sum_probs=67.4
Q ss_pred CcEEEEEEcCCCCEEEEEECC-----CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC------CcEEEE
Q psy9598 477 SAVFCVLFDKLGEVIVTGADD-----LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD------KTIRIW 545 (1915)
Q Consensus 477 ~~V~~vafspdg~~LaTGs~D-----g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D------gtIrVW 545 (1915)
-.+..+.+||+|++|+.+.+. ..|+|-|+.+|..+...-.... ..++|++|+..|+.+..+ ..|.+|
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 456678899999999876443 3688999998864432221222 569999998866655432 368888
Q ss_pred ECCCC--ceEEEeecCCCCeEEEEeccCccCCCcEEEEEeC---CCeEEEEecc
Q psy9598 546 NLQTL--APISVLVGHQGIITGVNFCPLEVNGFNYLASTST---DGCIGFWKYK 594 (1915)
Q Consensus 546 Dl~tg--~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~---DgtI~iWDl~ 594 (1915)
++.++ .-...+........-..+.+ .++.+++..+. ++.+.+|+..
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s---~d~~~l~i~~~~~~~~~~~l~~~~ 255 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKT---TSKHYVVIHLASATTSEVLLLDAE 255 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEc---CCCCEEEEEEECCccccEEEEECc
Confidence 88887 33444443333333222222 13344444433 3467788753
No 483
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=95.62 E-value=1 Score=55.62 Aligned_cols=200 Identities=12% Similarity=0.015 Sum_probs=96.5
Q ss_pred EEEcCCCCEEEEEEC------CCcEEEEECCCCcEEEEEeCC---CCCEEEEEEeCCCCEEEEEeC--------------
Q psy9598 482 VLFDKLGEVIVTGAD------DLLIKLWRARDGKLLATLRGC---SGEISDIAIDNRNILLAAGTV-------------- 538 (1915)
Q Consensus 482 vafspdg~~LaTGs~------Dg~I~IWd~~tg~~~~~l~gH---~~~I~~Lafspdg~~LaSgs~-------------- 538 (1915)
+-.-|+|.+++|+-. -|-+.+.|-.+.......... ..--.++.|.|..+.++|...
T Consensus 135 ~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d 214 (461)
T PF05694_consen 135 VHCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPED 214 (461)
T ss_dssp EEE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTT
T ss_pred eeecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhH
Confidence 334478988888632 257889998888888777532 233567888898888888643
Q ss_pred ------CCcEEEEECCCCceEEEeecCC--CCeEEEEeccCccCCCcEEEEEeCCCeEEEEec-ccCccccceeccCccc
Q psy9598 539 ------DKTIRIWNLQTLAPISVLVGHQ--GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY-KLDIDISKTVFHEPVM 609 (1915)
Q Consensus 539 ------DgtIrVWDl~tg~~~~~l~~h~--~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl-~~~~~~~~~~~~~~~~ 609 (1915)
..++.|||+.+.+.++++.--. ..+..|.|..+. ....-++.+.-.++|..|-- ..+..........+..
T Consensus 215 ~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P-~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~ 293 (461)
T PF05694_consen 215 LEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDP-DANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAK 293 (461)
T ss_dssp HHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SST-T--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--E
T ss_pred hhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCC-CccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCc
Confidence 3589999999999999886432 245678887643 22233444444555544432 3332211111111111
Q ss_pred ---------cccccCCCCCceEEEEECCCCcEEEEEe-CCCeEEEEEecCCCCCceeEEecc----------------CC
Q psy9598 610 ---------FNERIRPGNAHILCSSFSPGGLFLATGS-GDHHVRVYKMDGVDSPLGILEVEE----------------HS 663 (1915)
Q Consensus 610 ---------~~~~~~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~IwDl~~~~~~~~i~~l~~----------------h~ 663 (1915)
....+..-..-|+.|.+|.|.++|.+.+ ..|.|+.||+.....+..+..+.- -.
T Consensus 294 ~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~ 373 (461)
T PF05694_consen 294 KVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLR 373 (461)
T ss_dssp E--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------
T ss_pred ccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccC
Confidence 0111111235588999999999887765 489999999976666655544321 11
Q ss_pred CCeeEEEEcCCCCEEEEEe
Q psy9598 664 DKVDSIQWSHSHLRFVSGS 682 (1915)
Q Consensus 664 ~~V~sl~fspdg~~L~sgs 682 (1915)
+...-|++|-||++|+..+
T Consensus 374 GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 374 GGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp S----EEE-TTSSEEEEE-
T ss_pred CCCCeEEEccCCeEEEEEe
Confidence 2235566777777766553
No 484
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.50 E-value=2.2 Score=53.61 Aligned_cols=72 Identities=18% Similarity=0.312 Sum_probs=47.6
Q ss_pred EEEEeCCCCEEEEEeCCCcEEE---EECCC-C----ceEEEeec---CC--CCeEEEEeccCcc-------CCCcEEEEE
Q psy9598 523 DIAIDNRNILLAAGTVDKTIRI---WNLQT-L----APISVLVG---HQ--GIITGVNFCPLEV-------NGFNYLAST 582 (1915)
Q Consensus 523 ~Lafspdg~~LaSgs~DgtIrV---WDl~t-g----~~~~~l~~---h~--~~V~sl~fsp~~~-------~d~~~L~sg 582 (1915)
+++.+|++.+||.|..+..|.+ |+... + .......+ +. ..|+++.|.|... .+...++.|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 4677899999999877776655 64411 1 11222211 21 4788888877621 145789999
Q ss_pred eCCCeEEEEecc
Q psy9598 583 STDGCIGFWKYK 594 (1915)
Q Consensus 583 s~DgtI~iWDl~ 594 (1915)
..+|.|+||...
T Consensus 86 ~ssG~vrfyte~ 97 (415)
T PF14655_consen 86 TSSGYVRFYTEN 97 (415)
T ss_pred ecccEEEEEecc
Confidence 999999999864
No 485
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.40 E-value=0.7 Score=61.19 Aligned_cols=194 Identities=12% Similarity=0.046 Sum_probs=105.0
Q ss_pred CCCCcEEEEEEcCCCCEEEEEE------CCC--cEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCC------
Q psy9598 474 GHLSAVFCVLFDKLGEVIVTGA------DDL--LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVD------ 539 (1915)
Q Consensus 474 gH~~~V~~vafspdg~~LaTGs------~Dg--~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~D------ 539 (1915)
|....+...+++|+|..+|... .|+ .|.+++. .+.....+.+. ..++-.|+|+|..|++.+..
T Consensus 347 g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v 423 (591)
T PRK13616 347 GQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRV 423 (591)
T ss_pred ccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--CCCCceECCCCCceEEEecCcceEEE
Confidence 4445788999999999988765 244 4555554 33332223333 37889999998877776532
Q ss_pred ------CcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEE---ecccCccccceeccCcccc
Q psy9598 540 ------KTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW---KYKLDIDISKTVFHEPVMF 610 (1915)
Q Consensus 540 ------gtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iW---Dl~~~~~~~~~~~~~~~~~ 610 (1915)
+.|.+.++..+.... ...+.|..+.|+|++ ..|+... +|.|.+- ....+. ..+..+...
T Consensus 424 ~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG----~RiA~i~-~g~v~Va~Vvr~~~G~----~~l~~~~~l 491 (591)
T PRK13616 424 IRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDG----VRAAMII-GGKVYLAVVEQTEDGQ----YALTNPREV 491 (591)
T ss_pred eccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCC----CEEEEEE-CCEEEEEEEEeCCCCc----eeecccEEe
Confidence 222222333332222 234679999999954 6665554 4666662 222221 111111111
Q ss_pred ccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q psy9598 611 NERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 688 (1915)
Q Consensus 611 ~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~ 688 (1915)
.. .-...+..+.|..++.++ ++..++...+|.+.-.........-......+.+|+-+++ .++.+..+|.+.
T Consensus 492 ~~---~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~~ 563 (591)
T PRK13616 492 GP---GLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARAVLQ 563 (591)
T ss_pred ec---ccCCccccceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCceEE
Confidence 11 112335788999999854 5555555556655322211111111123566777776653 466666666433
No 486
>PHA02713 hypothetical protein; Provisional
Probab=95.37 E-value=0.39 Score=63.65 Aligned_cols=194 Identities=9% Similarity=-0.041 Sum_probs=98.5
Q ss_pred CCCEEEEEECC------CcEEEEECCCCcEEEEEeCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCce--E
Q psy9598 487 LGEVIVTGADD------LLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDK-----TIRIWNLQTLAP--I 553 (1915)
Q Consensus 487 dg~~LaTGs~D------g~I~IWd~~tg~~~~~l~gH~~~I~~Lafspdg~~LaSgs~Dg-----tIrVWDl~tg~~--~ 553 (1915)
++.+++.||.+ ..|..||..+......-.-....-......-+|.+.+.||.++ +|.+||..+..- +
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~ 382 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKML 382 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEEC
Confidence 46777777754 3477888777643221110111111112233577778887654 478899876432 1
Q ss_pred EEeecCCCCeEEEEeccCccCCCcEEEEEeCCC-----------------------eEEEEecccCccccceeccCcccc
Q psy9598 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG-----------------------CIGFWKYKLDIDISKTVFHEPVMF 610 (1915)
Q Consensus 554 ~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg-----------------------tI~iWDl~~~~~~~~~~~~~~~~~ 610 (1915)
..+.........+++ ++.+.+.|+.++ +|..||..+..........
T Consensus 383 ~~mp~~r~~~~~~~~------~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~----- 451 (557)
T PHA02713 383 PDMPIALSSYGMCVL------DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFW----- 451 (557)
T ss_pred CCCCcccccccEEEE------CCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCC-----
Confidence 111111111112222 346777777553 3556666655321111000
Q ss_pred ccccCCCCCceEEEEECCCCcEEEEEeCCC------eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCC
Q psy9598 611 NERIRPGNAHILCSSFSPGGLFLATGSGDH------HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684 (1915)
Q Consensus 611 ~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg------~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~D 684 (1915)
. .........-+|...++||.++ .|..||.........+..+.........+.+ +|...++|+.+
T Consensus 452 -----~--~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~ 522 (557)
T PHA02713 452 -----T--GTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYE 522 (557)
T ss_pred -----c--ccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeec
Confidence 0 0111111223566667776542 4667887431234444444333333333333 67888999988
Q ss_pred C--cEEEEEccCCceEEe
Q psy9598 685 G--TALIWYYKCSQWRFI 700 (1915)
Q Consensus 685 G--~I~IWDl~~~~~~~~ 700 (1915)
| ++-.||..+.+|...
T Consensus 523 ~~~~~e~yd~~~~~W~~~ 540 (557)
T PHA02713 523 SYMLQDTFNVYTYEWNHI 540 (557)
T ss_pred ceeehhhcCcccccccch
Confidence 8 788899999888653
No 487
>KOG2444|consensus
Probab=95.34 E-value=0.023 Score=63.44 Aligned_cols=142 Identities=16% Similarity=0.120 Sum_probs=75.5
Q ss_pred EEEEEeCCCcEEEEECCCCceEE-EeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccCcccc
Q psy9598 532 LLAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMF 610 (1915)
Q Consensus 532 ~LaSgs~DgtIrVWDl~tg~~~~-~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~ 610 (1915)
.|..-+.||.|+-+++...+... .-.-|... ..+ + .....|++|+.+|.|.+|.+..........
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~-~~v---~---~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~------- 97 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCRSERFIDEG-QRV---V---TASAKLMVGTSDGAVYVFNWNLEGAHSDRV------- 97 (238)
T ss_pred hhccccCCcccccchhhhhhhhhhhhhhhhcc-eee---c---ccCceEEeecccceEEEecCCccchHHHhh-------
Confidence 34445668888877765322111 00011111 111 1 133689999999999999876322111111
Q ss_pred ccccCCCCCceEEE-EECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCC-CCeeEEEEcCCCCEEEEE--eCCCc
Q psy9598 611 NERIRPGNAHILCS-SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS-DKVDSIQWSHSHLRFVSG--SRDGT 686 (1915)
Q Consensus 611 ~~~~~~~~~~V~~l-~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~-~~V~sl~fspdg~~L~sg--s~DG~ 686 (1915)
......|.|+ ....++.+..+++.+|.|+.|++. ....+.....|+ .++..+..+..+..++++ |.|..
T Consensus 98 ----~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~---p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~ 170 (238)
T KOG2444|consen 98 ----CSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIK---PNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRV 170 (238)
T ss_pred ----hcccccceeccccccccceeEEeccCCceeeeccc---cCceeeeeccccCCCcceeEEecCCceEEeeccccchh
Confidence 1111223332 223355688899999999999983 223333334455 344444455555555555 66666
Q ss_pred EEEEEccC
Q psy9598 687 ALIWYYKC 694 (1915)
Q Consensus 687 I~IWDl~~ 694 (1915)
++.|++..
T Consensus 171 ~k~W~ve~ 178 (238)
T KOG2444|consen 171 LKKWNVEK 178 (238)
T ss_pred hhhcchhh
Confidence 66666543
No 488
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.33 E-value=1.7 Score=50.83 Aligned_cols=186 Identities=11% Similarity=0.101 Sum_probs=119.2
Q ss_pred EecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEeCC-CCCEEEEEEeCCCCEEEEE
Q psy9598 458 ISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGC-SGEISDIAIDNRNILLAAG 536 (1915)
Q Consensus 458 i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~Dg~I~IWd~~tg~~~~~l~gH-~~~I~~Lafspdg~~LaSg 536 (1915)
+|...|.-......+.|-...|.++.|+|+.+.|++......-.||=..+|.++.++.-. -+..-.|.+..+|++.++-
T Consensus 67 ~~l~~y~~~i~akpi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~d 146 (316)
T COG3204 67 RYLLEYRARIDAKPILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVD 146 (316)
T ss_pred hccCCceEEEeccccccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEe
Confidence 333334333333345676777999999999999999999888899988899999887421 1233567888888888888
Q ss_pred eCCCcEEEEECCCCceEEE-------ee--cC-CCCeEEEEeccCccCCCcEEEEEeCCCeEEEEecccCccccceeccC
Q psy9598 537 TVDKTIRIWNLQTLAPISV-------LV--GH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606 (1915)
Q Consensus 537 s~DgtIrVWDl~tg~~~~~-------l~--~h-~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~ 606 (1915)
=.++.+.++.+.....+.. +. .+ ....-.++|.|.. ..|+.+-.-.-+.||.+...... +..+.
T Consensus 147 ER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~----~~l~~aKEr~P~~I~~~~~~~~~--l~~~~ 220 (316)
T COG3204 147 ERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVD----HRLFVAKERNPIGIFEVTQSPSS--LSVHA 220 (316)
T ss_pred hhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCC----ceEEEEEccCCcEEEEEecCCcc--ccccc
Confidence 7888888888765432211 11 12 4567899999944 77777777777788776643211 11110
Q ss_pred ccccccccCCCCCceEEEEECCC-CcEEEEEeCCCeEEEEEecC
Q psy9598 607 PVMFNERIRPGNAHILCSSFSPG-GLFLATGSGDHHVRVYKMDG 649 (1915)
Q Consensus 607 ~~~~~~~~~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~IwDl~~ 649 (1915)
.........-.-..|.++.|++. +.+|+-+..++.|.-.|..+
T Consensus 221 ~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 221 SLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred ccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecCC
Confidence 00000000000134677888874 56677777788888888743
No 489
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.20 E-value=1.6 Score=57.77 Aligned_cols=165 Identities=18% Similarity=0.197 Sum_probs=87.9
Q ss_pred CCCCCEEEEEEeCCCCEEEEEe------CCC--cEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCC-C
Q psy9598 516 GCSGEISDIAIDNRNILLAAGT------VDK--TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD-G 586 (1915)
Q Consensus 516 gH~~~I~~Lafspdg~~LaSgs------~Dg--tIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~D-g 586 (1915)
+....+.+.+++++|..+|... .|+ .|.+++. .+.....+.+. ..+.-.|+|++ ..|++.+.. .
T Consensus 347 g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--~~t~PsWspDG----~~lw~v~dg~~ 419 (591)
T PRK13616 347 GQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--SLTRPSWSLDA----DAVWVVVDGNT 419 (591)
T ss_pred ccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--CCCCceECCCC----CceEEEecCcc
Confidence 3334678999999999887665 244 4555554 23333333332 37888999953 566665433 2
Q ss_pred eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCC-cee---EEe-cc
Q psy9598 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP-LGI---LEV-EE 661 (1915)
Q Consensus 587 tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~-~~i---~~l-~~ 661 (1915)
.+++.+-.....+......... ... ...+.|..+.|||||..|+... +|.|.|--+...... ..+ ..+ .+
T Consensus 420 ~~~v~~~~~~gql~~~~vd~ge-~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~ 494 (591)
T PRK13616 420 VVRVIRDPATGQLARTPVDASA-VAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPG 494 (591)
T ss_pred eEEEeccCCCceEEEEeccCch-hhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecc
Confidence 2222222111111111111000 000 1235699999999999888765 477777433221111 111 112 22
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy9598 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693 (1915)
Q Consensus 662 h~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~ 693 (1915)
....+.++.|..++.+ +++..++...+|.+.
T Consensus 495 l~~~~~~l~W~~~~~L-~V~~~~~~~~v~~v~ 525 (591)
T PRK13616 495 LGDTAVSLDWRTGDSL-VVGRSDPEHPVWYVN 525 (591)
T ss_pred cCCccccceEecCCEE-EEEecCCCCceEEEe
Confidence 3344688999998885 455666666667543
No 490
>KOG2395|consensus
Probab=95.16 E-value=0.58 Score=57.95 Aligned_cols=141 Identities=12% Similarity=0.099 Sum_probs=91.2
Q ss_pred EEEEEeCCCeEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCc-------EEEEEeCCCeEEEEEecCC
Q psy9598 578 YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL-------FLATGSGDHHVRVYKMDGV 650 (1915)
Q Consensus 578 ~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~-------~Lasgs~Dg~I~IwDl~~~ 650 (1915)
+|.++..-..|.-.|+..|..+....++ ..|.-+.+.|++. .-++|-.+..|.-||.+-.
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~-------------~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~ 414 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFE-------------DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQ 414 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeecc-------------CCcceeeccCCcchhcccccccEEeecCCceEEeccccc
Confidence 3444555566777788888766555554 2255556666543 2356778889999998632
Q ss_pred CCCceeEEeccC----CCCeeEEEEcCCCCEEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEE
Q psy9598 651 DSPLGILEVEEH----SDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTM 726 (1915)
Q Consensus 651 ~~~~~i~~l~~h----~~~V~sl~fspdg~~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 726 (1915)
.. ..+....+| .....|++-..+| ++|+||.+|.|++||- .+. .......+....|..
T Consensus 415 ~~-~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~---------------~AKTAlPgLG~~I~h 476 (644)
T KOG2395|consen 415 GK-NKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGR---------------RAKTALPGLGDAIKH 476 (644)
T ss_pred Cc-ceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhh---------------hhhhcccccCCceee
Confidence 22 123333333 2345666655555 8999999999999985 222 112234456788999
Q ss_pred EEECCCCCEEEEEEecCCeEEEEEC
Q psy9598 727 VAWDASDRWVITAINFNFQIKIWDA 751 (1915)
Q Consensus 727 va~spdg~~L~t~s~~Dg~I~vwD~ 751 (1915)
|..+.+|.+|+++| +..+.+.++
T Consensus 477 VdvtadGKwil~Tc--~tyLlLi~t 499 (644)
T KOG2395|consen 477 VDVTADGKWILATC--KTYLLLIDT 499 (644)
T ss_pred EEeeccCcEEEEec--ccEEEEEEE
Confidence 99999999999887 566766664
No 491
>KOG2395|consensus
Probab=95.14 E-value=0.46 Score=58.77 Aligned_cols=149 Identities=11% Similarity=0.096 Sum_probs=97.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccC---CCcEEEEEeCCCeEEEEecccCccccceeccCcc
Q psy9598 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN---GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV 608 (1915)
Q Consensus 532 ~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~---d~~~L~sgs~DgtI~iWDl~~~~~~~~~~~~~~~ 608 (1915)
+|.++..-..|+-.|+..|+.+....-|.. |+-+.+.|+... ....-+.|-.|..|+-||.+-... ..+......
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~-~kl~~~q~k 425 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK-NKLAVVQSK 425 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc-ceeeeeecc
Confidence 344555566788899999999998887766 777888875411 011223455677889999874321 111111111
Q ss_pred ccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q psy9598 609 MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 688 (1915)
Q Consensus 609 ~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG~I~ 688 (1915)
.+ .......|++-..+| +||+|+.+|.|++||--+ ...-..+.+...+|..|..+.+|.+|++.+ +.++.
T Consensus 426 qy-----~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~---~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLl 495 (644)
T KOG2395|consen 426 QY-----STKNNFSCFATTESG-YIVVGSLKGDIRLYDRIG---RRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLL 495 (644)
T ss_pred cc-----ccccccceeeecCCc-eEEEeecCCcEEeehhhh---hhhhhcccccCCceeeEEeeccCcEEEEec-ccEEE
Confidence 11 223556777777777 799999999999999622 122234678889999999999999877655 45565
Q ss_pred EEEc
Q psy9598 689 IWYY 692 (1915)
Q Consensus 689 IWDl 692 (1915)
+-++
T Consensus 496 Li~t 499 (644)
T KOG2395|consen 496 LIDT 499 (644)
T ss_pred EEEE
Confidence 5554
No 492
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.10 E-value=2.3 Score=51.59 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=64.4
Q ss_pred ccEEEEEECCCCCEEEEEEecCCeEEEEECCC--C----ce-EEEeeCCCCCeEEEEEccCCCCEEEEEecCc-eEEEEE
Q psy9598 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFN--G----DL-VQVLKGHTNEVFVLESHPFDSRVLLSAGHDG-LIIIWD 793 (1915)
Q Consensus 722 ~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~t--g----~~-i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG-~I~IWd 793 (1915)
..-+.|+||||++.++.+.+..+.|+.|++.. + .. ...+..+.+..-.++... +|.+.+++...| .|.+|+
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDa-dG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDA-DGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred EecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeC-CCCEEEecccCCceEEEEC
Confidence 34567999999999999988678898888752 2 11 112222344455566666 777776555554 899999
Q ss_pred CCCCccccceeeeeeecCCCCcceEEEEE-cCCCCEEEEEe
Q psy9598 794 ILSSKQRGYKWFHNIVEGQGEGALFDGKW-SPDGTTCALTD 833 (1915)
Q Consensus 794 l~s~~~~~~~~~~~~~~~~~~~~V~~vaf-Spdg~~Lasg~ 833 (1915)
.. ++. +..+. -....+++++| .++.+.|.+++
T Consensus 242 pd-G~l--~~~i~-----lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 242 PD-GKL--LGEIK-----LPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred CC-CcE--EEEEE-----CCCCCCccceEeCCCcCEEEEEe
Confidence 88 766 44443 11245667777 34555554443
No 493
>PHA02713 hypothetical protein; Provisional
Probab=95.02 E-value=1.1 Score=59.49 Aligned_cols=226 Identities=9% Similarity=0.077 Sum_probs=106.1
Q ss_pred cEEEEECCCCcEEE--EEeCCCCCEEEEEEeCCCCEEEEEeCC------CcEEEEECCCCceE--EEeecCCCCeEEEEe
Q psy9598 499 LIKLWRARDGKLLA--TLRGCSGEISDIAIDNRNILLAAGTVD------KTIRIWNLQTLAPI--SVLVGHQGIITGVNF 568 (1915)
Q Consensus 499 ~I~IWd~~tg~~~~--~l~gH~~~I~~Lafspdg~~LaSgs~D------gtIrVWDl~tg~~~--~~l~~h~~~V~sl~f 568 (1915)
.+..||..++.... .+...... .+++. -++.+++.||.+ ..+..||..+..-. ..+....... +++.
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~~ 349 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLAV 349 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEEE
Confidence 56677877664322 22111111 12222 356677777753 34677887665321 1111111111 2222
Q ss_pred ccCccCCCcEEEEEeCCC-----eEEEEecccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCC---
Q psy9598 569 CPLEVNGFNYLASTSTDG-----CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH--- 640 (1915)
Q Consensus 569 sp~~~~d~~~L~sgs~Dg-----tI~iWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg--- 640 (1915)
. ++.+.+.||.++ ++..||..+.......... . .. .....++ -+|...+.||.++
T Consensus 350 ~-----~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp--~----~r----~~~~~~~--~~g~IYviGG~~~~~~ 412 (557)
T PHA02713 350 I-----DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMP--I----AL----SSYGMCV--LDQYIYIIGGRTEHID 412 (557)
T ss_pred E-----CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCC--c----cc----ccccEEE--ECCEEEEEeCCCcccc
Confidence 2 346777777654 4778887765321111111 0 00 1111122 2677777777653
Q ss_pred --------------------eEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEEEEEeCCC------cEEEEEccC
Q psy9598 641 --------------------HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG------TALIWYYKC 694 (1915)
Q Consensus 641 --------------------~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L~sgs~DG------~I~IWDl~~ 694 (1915)
.|..||... .....+..+....... +++ .-+|...+.|+.++ .+..||..+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~ve~YDP~t-d~W~~v~~m~~~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 413 YTSVHHMNSIDMEEDTHSSNKVIRYDTVN-NIWETLPNFWTGTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccccccccccceEEEECCCC-CeEeecCCCCcccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 366677632 2222222111111111 122 23566777777542 467899988
Q ss_pred -CceEEeeecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCC--eEEEEECCCCceEEEeeCCC
Q psy9598 695 -SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF--QIKIWDAFNGDLVQVLKGHT 764 (1915)
Q Consensus 695 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg--~I~vwD~~tg~~i~~l~gH~ 764 (1915)
.+|..... + + ........+++ +|...++||. +| .+-.||..+.+-...-..|.
T Consensus 490 ~~~W~~~~~-m----~---------~~r~~~~~~~~--~~~iyv~Gg~-~~~~~~e~yd~~~~~W~~~~~~~~ 545 (557)
T PHA02713 490 YNGWELITT-T----E---------SRLSALHTILH--DNTIMMLHCY-ESYMLQDTFNVYTYEWNHICHQHS 545 (557)
T ss_pred CCCeeEccc-c----C---------cccccceeEEE--CCEEEEEeee-cceeehhhcCcccccccchhhhcC
Confidence 68865321 1 0 01112222332 5566666665 66 67778877766554444444
No 494
>KOG4499|consensus
Probab=95.01 E-value=2.6 Score=47.40 Aligned_cols=148 Identities=9% Similarity=0.098 Sum_probs=85.5
Q ss_pred CceEEEEECCCCcEEEEEeC----------CCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcCCCCEE-EEEeCCCcE
Q psy9598 619 AHILCSSFSPGGLFLATGSG----------DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF-VSGSRDGTA 687 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~----------Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fspdg~~L-~sgs~DG~I 687 (1915)
...+....+|+|+++ .|.. .|.++.|-.. .. +..+...-+--+.|+|+.+...| ++-+.+-.|
T Consensus 109 nR~NDgkvdP~Gryy-~GtMad~~~~le~~~g~Ly~~~~~--h~---v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V 182 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYY-GGTMADFGDDLEPIGGELYSWLAG--HQ---VELIWNCVGISNGLAWDSDAKKFYYIDSLNYEV 182 (310)
T ss_pred cccccCccCCCCcee-eeeeccccccccccccEEEEeccC--CC---ceeeehhccCCccccccccCcEEEEEccCceEE
Confidence 445566778999874 3322 2445555441 11 11111222334567888776655 455677778
Q ss_pred EEEE--ccCCceEEe--eecccccCCCCccccccccccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCC
Q psy9598 688 LIWY--YKCSQWRFI--RLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 763 (1915)
Q Consensus 688 ~IWD--l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH 763 (1915)
.-|| +.++..... ..++.... .. ....--.++++..|.+.+++-+ .++|...|..+|+.+..+.-.
T Consensus 183 ~a~dyd~~tG~~snr~~i~dlrk~~----~~-----e~~~PDGm~ID~eG~L~Va~~n-g~~V~~~dp~tGK~L~eiklP 252 (310)
T KOG4499|consen 183 DAYDYDCPTGDLSNRKVIFDLRKSQ----PF-----ESLEPDGMTIDTEGNLYVATFN-GGTVQKVDPTTGKILLEIKLP 252 (310)
T ss_pred eeeecCCCcccccCcceeEEeccCC----Cc-----CCCCCCcceEccCCcEEEEEec-CcEEEEECCCCCcEEEEEEcC
Confidence 7788 555542110 01111000 00 0111122445667777777776 899999999999999999988
Q ss_pred CCCeEEEEEccCCCCEEEE
Q psy9598 764 TNEVFVLESHPFDSRVLLS 782 (1915)
Q Consensus 764 ~~~V~sl~~sp~dg~~LaS 782 (1915)
...|+++||-..+-.+|++
T Consensus 253 t~qitsccFgGkn~d~~yv 271 (310)
T KOG4499|consen 253 TPQITSCCFGGKNLDILYV 271 (310)
T ss_pred CCceEEEEecCCCccEEEE
Confidence 9999999997533344443
No 495
>KOG4441|consensus
Probab=94.95 E-value=1.7 Score=57.54 Aligned_cols=224 Identities=14% Similarity=0.102 Sum_probs=112.9
Q ss_pred CeEEEecccCCceeeeEEecCCCCcEEEEEEcCCCCEEEEEECC------CcEEEEECCCCcEEEEEeCCCCCEEEEEEe
Q psy9598 454 RSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADD------LLIKLWRARDGKLLATLRGCSGEISDIAID 527 (1915)
Q Consensus 454 ~~~~i~~~~~~~~~~~~~l~gH~~~V~~vafspdg~~LaTGs~D------g~I~IWd~~tg~~~~~l~gH~~~I~~Lafs 527 (1915)
..+...+.....+.....+.. ...-.++++. +|.+.++||.| .++..||..+.+-...-.-.......-...
T Consensus 301 ~~ve~yd~~~~~w~~~a~m~~-~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~ 378 (571)
T KOG4441|consen 301 RSVECYDPKTNEWSSLAPMPS-PRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAV 378 (571)
T ss_pred ceeEEecCCcCcEeecCCCCc-ccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEE
Confidence 344333333333333333332 2334445554 35788889888 357788887766333111111111111112
Q ss_pred CCCCEEEEEeCCC-----cEEEEECCCCc--eEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCC------eEEEEecc
Q psy9598 528 NRNILLAAGTVDK-----TIRIWNLQTLA--PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG------CIGFWKYK 594 (1915)
Q Consensus 528 pdg~~LaSgs~Dg-----tIrVWDl~tg~--~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~Dg------tI~iWDl~ 594 (1915)
-+|.+.|+||.|| +|-.||..+.+ .+..+.. ...+.+.... ++.+.++||.++ +|..||..
T Consensus 379 l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~---~r~~~gv~~~---~g~iYi~GG~~~~~~~l~sve~YDP~ 452 (571)
T KOG4441|consen 379 LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT---RRSGHGVAVL---GGKLYIIGGGDGSSNCLNSVECYDPE 452 (571)
T ss_pred ECCEEEEEeccccccccccEEEecCCCCcccccCCCCc---ceeeeEEEEE---CCEEEEEcCcCCCccccceEEEEcCC
Confidence 3677888999886 46677776533 2222211 2222222221 357778887654 45677776
Q ss_pred cCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCe-----EEEEEecCCCCCceeEEeccCCCCeeEE
Q psy9598 595 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH-----VRVYKMDGVDSPLGILEVEEHSDKVDSI 669 (1915)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~-----I~IwDl~~~~~~~~i~~l~~h~~~V~sl 669 (1915)
++......... ... .... + -.-++.+.++||.|+. |..||... .....+..+......+..+
T Consensus 453 t~~W~~~~~M~------~~R----~~~g-~-a~~~~~iYvvGG~~~~~~~~~VE~ydp~~-~~W~~v~~m~~~rs~~g~~ 519 (571)
T KOG4441|consen 453 TNTWTLIAPMN------TRR----SGFG-V-AVLNGKIYVVGGFDGTSALSSVERYDPET-NQWTMVAPMTSPRSAVGVV 519 (571)
T ss_pred CCceeecCCcc------ccc----ccce-E-EEECCEEEEECCccCCCccceEEEEcCCC-CceeEcccCccccccccEE
Confidence 66432221111 000 1111 1 1225677888887763 66677632 2233332222233333333
Q ss_pred EEcCCCCEEEEEeCCC-----cEEEEEccCCceEEe
Q psy9598 670 QWSHSHLRFVSGSRDG-----TALIWYYKCSQWRFI 700 (1915)
Q Consensus 670 ~fspdg~~L~sgs~DG-----~I~IWDl~~~~~~~~ 700 (1915)
.+ ++...++|+.|| +|..||..+.+|...
T Consensus 520 ~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~~~ 553 (571)
T KOG4441|consen 520 VL--GGKLYAVGGFDGNNNLNTVECYDPETDTWTEV 553 (571)
T ss_pred EE--CCEEEEEecccCccccceeEEcCCCCCceeeC
Confidence 32 566788888886 477888888887653
No 496
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=94.94 E-value=4.3 Score=47.93 Aligned_cols=228 Identities=13% Similarity=0.145 Sum_probs=128.4
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEec-----CCCCCceeEEecc-----CCCCeeEEEEcCCCC------------
Q psy9598 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMD-----GVDSPLGILEVEE-----HSDKVDSIQWSHSHL------------ 676 (1915)
Q Consensus 619 ~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~-----~~~~~~~i~~l~~-----h~~~V~sl~fspdg~------------ 676 (1915)
..-+.|+|+|.+.+-++....+...+||.. ..... .+..+.. .....+.+.|+....
T Consensus 23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~-L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDP-LVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred cccceeEecCCCCEEEecCCcceEEeecCCcccccCCccc-eEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 345789999999888888888999999985 21212 2233332 224577777764332
Q ss_pred EEEEEeCCCcEEEEEccCCceEEeeecccccCCCCccccccccccccEEEEEEC--CCCCEEEEEEecCCeEEEEECCCC
Q psy9598 677 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWD--ASDRWVITAINFNFQIKIWDAFNG 754 (1915)
Q Consensus 677 ~L~sgs~DG~I~IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~va~s--pdg~~L~t~s~~Dg~I~vwD~~tg 754 (1915)
.|+.++.||+|.-|...-.....+ .. ...............+++. ..+.+|+++.-..++|.|||-.-.
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~~--------~~-~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~ 172 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRMT--------RA-EIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFR 172 (336)
T ss_pred eEEEEeCCceEEeecCcCCccccc--------cc-EEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccc
Confidence 477888999999997432221000 00 0000000011222334443 457888888777899999986422
Q ss_pred ceEEEeeCCCCCeEEEEEccC-----CCCEEE-------------EEecCceEEEEECCCCccccceeeeeeecCCCCcc
Q psy9598 755 DLVQVLKGHTNEVFVLESHPF-----DSRVLL-------------SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGA 816 (1915)
Q Consensus 755 ~~i~~l~gH~~~V~sl~~sp~-----dg~~La-------------Sgs~DG~I~IWdl~s~~~~~~~~~~~~~~~~~~~~ 816 (1915)
.+..-.....+-.-..|.|. .+.+++ .|-.-|.|-+||+. +.. ++.+. .+..-..
T Consensus 173 -~~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l--~~r~a---s~g~LNa 245 (336)
T TIGR03118 173 -PPPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQL--LRRVA---SSGRLNA 245 (336)
T ss_pred -cccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcE--EEEec---cCCcccC
Confidence 22110000010000001110 223332 33345789999985 333 34332 3334456
Q ss_pred eEEEEEcC------CCCEEEEEeCCCeEEEEeCCCCcccccCCCceeecCCCCeeeec
Q psy9598 817 LFDGKWSP------DGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRP 868 (1915)
Q Consensus 817 V~~vafSp------dg~~Lasg~~dG~I~Iwdl~s~~~~~~l~~~~~F~~d~~~Lv~~ 868 (1915)
.+.|+..| .|.+|+---.||+|..||..++..+..+.. +++.+++.+
T Consensus 246 PWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~-----~~G~pi~i~ 298 (336)
T TIGR03118 246 PWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLD-----PDNHPVKVD 298 (336)
T ss_pred CceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecC-----CCCCeEEec
Confidence 77788766 467777767899999999998887766555 666666654
No 497
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.79 E-value=8.5 Score=46.59 Aligned_cols=162 Identities=20% Similarity=0.210 Sum_probs=81.0
Q ss_pred EeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEeccCccCCCcEEEEEeCCCeEEEEec
Q psy9598 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593 (1915)
Q Consensus 514 l~gH~~~I~~Lafspdg~~LaSgs~DgtIrVWDl~tg~~~~~l~~h~~~V~sl~fsp~~~~d~~~L~sgs~DgtI~iWDl 593 (1915)
...-.+.|..+..+++|.+|++++.-..+.-||--...-...-......|.++.|.|++ .+.+ ....|.|++=+.
T Consensus 140 ~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~----~lw~-~~~Gg~~~~s~~ 214 (302)
T PF14870_consen 140 VSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDG----NLWM-LARGGQIQFSDD 214 (302)
T ss_dssp E-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-----EEE-EETTTEEEEEE-
T ss_pred ccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCC----CEEE-EeCCcEEEEccC
Confidence 44556789999999999999988766666788864322222223356789999999853 4434 458888888762
Q ss_pred ccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEEEecCCCCCceeEEeccCCCCeeEEEEcC
Q psy9598 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 673 (1915)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~IwDl~~~~~~~~i~~l~~h~~~V~sl~fsp 673 (1915)
.... -....+. .......-.+..++|.+++...++|+. |.+ +...++..+.........-...+..|.|..
T Consensus 215 ~~~~----~~w~~~~---~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~ 285 (302)
T PF14870_consen 215 PDDG----ETWSEPI---IPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVN 285 (302)
T ss_dssp TTEE----EEE---B----TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEE
T ss_pred CCCc----ccccccc---CCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcC
Confidence 1110 0111000 011122345899999998877776655 444 344444444444333334456688888876
Q ss_pred CCCEEEEEeCCCcEEEE
Q psy9598 674 SHLRFVSGSRDGTALIW 690 (1915)
Q Consensus 674 dg~~L~sgs~DG~I~IW 690 (1915)
...-|+ .+.+|.|.-|
T Consensus 286 ~~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 286 PDKGFV-LGQDGVLLRY 301 (302)
T ss_dssp TTEEEE-E-STTEEEEE
T ss_pred CCceEE-ECCCcEEEEe
Confidence 654444 4577877655
No 498
>cd05493 Bromo_ALL-1 Bromodomain, ALL-1 like proteins. ALL-1 is a vertebrate homologue of Drosophila trithorax and is often affected in chromosomal rearrangements that are linked to acute leukemias, such as acute lymphocytic leukemia (ALL). Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Probab=94.78 E-value=0.036 Score=57.07 Aligned_cols=68 Identities=21% Similarity=0.366 Sum_probs=55.6
Q ss_pred ccchhhHHhhhcCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy9598 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSH 1640 (1915)
Q Consensus 1572 Pmdl~tI~~kl~~~~Y~s~~ef~~Dv~lif~Na~~yN~~~~s~i~~~a~~l~~~f~~~~~~~~~~~~~~ 1640 (1915)
|.||.-|++||+.|.|.|+.+|.+||-.|++-+.+-...- ..+-+....+..+|-++|..+..++...
T Consensus 59 p~dL~~V~kkl~~G~Y~sv~~F~~DvvkIiqa~l~~e~~~-pe~~ka~s~~Ksf~ik~me~vf~Wf~~~ 126 (131)
T cd05493 59 PLDLEAVGKKLEAGFYTSVLDFSDDIVKIIQAALNSEGGQ-PEIKKANSMAKSFFIKLMESVFPWFNSE 126 (131)
T ss_pred cccHHHHHHHHhccceehHHHHHHHHHHHHHHHHhhccCC-ccccCcchHHHHHHHHHHHHhccccccc
Confidence 8999999999999999999999999999999887755433 4444455667788888998888877644
No 499
>KOG4640|consensus
Probab=94.74 E-value=0.12 Score=65.01 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=78.2
Q ss_pred ccccEEEEEECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeE-EEEEccCCCCEEEEEecCceEEEEECCCCc
Q psy9598 720 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVF-VLESHPFDSRVLLSAGHDGLIIIWDILSSK 798 (1915)
Q Consensus 720 ~~~~V~~va~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~-sl~~sp~dg~~LaSgs~DG~I~IWdl~s~~ 798 (1915)
....|..+.|+|.-..||++.. +|.|-+.-+. .+.+.++..|...++ +++|.| ||++||.|-.||+|+|.|+.++.
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~-~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~-DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTE-KGELLIHRLN-WQRLWTIPIPGENVTASLCWRP-DGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cccceEEEEEcCccchhheecc-CCcEEEEEec-cceeEeccCCCCccceeeeecC-CCCEEEEEecCCeEEEEEccCCC
Confidence 4456788999999999999988 9999999887 888889987888787 999999 99999999999999999999987
Q ss_pred cccceeeeeeecCCCCcceEEEEEcC
Q psy9598 799 QRGYKWFHNIVEGQGEGALFDGKWSP 824 (1915)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~V~~vafSp 824 (1915)
. +..+. ......|.++-|++
T Consensus 96 ~--l~~~~----~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 96 R--LVSFL----FSVETDISKGIWDR 115 (665)
T ss_pred c--eeccc----cccccchheeeccc
Confidence 7 44421 11235677777763
No 500
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.65 E-value=12 Score=43.75 Aligned_cols=241 Identities=13% Similarity=0.097 Sum_probs=122.2
Q ss_pred EEEEeCCC-CEEEEEeCCCc-EEEEECCCCceEEEeecCCCC--eEEEEeccCccCCCcEEEEEeCC-----CeEEEEec
Q psy9598 523 DIAIDNRN-ILLAAGTVDKT-IRIWNLQTLAPISVLVGHQGI--ITGVNFCPLEVNGFNYLASTSTD-----GCIGFWKY 593 (1915)
Q Consensus 523 ~Lafspdg-~~LaSgs~Dgt-IrVWDl~tg~~~~~l~~h~~~--V~sl~fsp~~~~d~~~L~sgs~D-----gtI~iWDl 593 (1915)
.|+|+|.. .-++.+-.-|+ ..|+|..+.+...++....+. --.-.|+| ++.+|+..-.| |.|-|||.
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~----dG~~LYATEndfd~~rGViGvYd~ 147 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSP----DGRLLYATENDFDPNRGVIGVYDA 147 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCC----CCcEEEeecCCCCCCCceEEEEec
Confidence 45666643 23444444444 467888877766555432221 11235888 45788876544 78999998
Q ss_pred ccCccccceeccCccccccccCCCCCceEEEEECCCCcEEEEEeCCCeEEEE-Ee-------cCCC-----------CCc
Q psy9598 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY-KM-------DGVD-----------SPL 654 (1915)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~fspdg~~Lasgs~Dg~I~Iw-Dl-------~~~~-----------~~~ 654 (1915)
+.+-. ....+..|.-....+.+.+||+.|+.+.. -|..- |. +... ...
T Consensus 148 r~~fq-----------rvgE~~t~GiGpHev~lm~DGrtlvvanG--GIethpdfgR~~lNldsMePSlvlld~atG~li 214 (366)
T COG3490 148 REGFQ-----------RVGEFSTHGIGPHEVTLMADGRTLVVANG--GIETHPDFGRTELNLDSMEPSLVLLDAATGNLI 214 (366)
T ss_pred ccccc-----------eecccccCCcCcceeEEecCCcEEEEeCC--ceecccccCccccchhhcCccEEEEeccccchh
Confidence 74311 11122233344567889999998887643 33333 21 1111 001
Q ss_pred eeEEec--cCCCCeeEEEEcCCCCEEEEEeCCCcEE-----EEEccCCceEEeeecccccCCCCccccccccccccEEEE
Q psy9598 655 GILEVE--EHSDKVDSIQWSHSHLRFVSGSRDGTAL-----IWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV 727 (1915)
Q Consensus 655 ~i~~l~--~h~~~V~sl~fspdg~~L~sgs~DG~I~-----IWDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 727 (1915)
...++. -+...|..++..++|..++.+-.-|--. |=-...++.. ................|-+|
T Consensus 215 ekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l---------~~~~~pee~~~~~anYigsi 285 (366)
T COG3490 215 EKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPL---------EFLDLPEEQTAAFANYIGSI 285 (366)
T ss_pred hhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcC---------cccCCCHHHHHHHHhhhhhe
Confidence 111111 2334466666666665443332211100 0000000000 00000011122344668889
Q ss_pred EECCCCCEEEEEEecCCeEEEEECCCCceEEEeeCCCCCeEEEEEccCCCCEEEEEecCceEEEEEC
Q psy9598 728 AWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794 (1915)
Q Consensus 728 a~spdg~~L~t~s~~Dg~I~vwD~~tg~~i~~l~gH~~~V~sl~~sp~dg~~LaSgs~DG~I~IWdl 794 (1915)
+.+.+..+++.++-..+...+||..+|..+..-.-.. +..|+. ...-++..+.+|.|.++.-
T Consensus 286 A~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~d--aaGva~---~~~gf~vssg~G~~~~~s~ 347 (366)
T COG3490 286 AANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPD--AAGVAA---AKGGFAVSSGQGRIIFYSR 347 (366)
T ss_pred eecccCCeEEEecCCCCeEEEEEcCCCcEEecccccc--ccccee---ccCceEEecCCceEEeccc
Confidence 9988888888877757788999999998876533111 222222 2233555566888887743
Done!