Your job contains 1 sequence.
>psy9598
LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP
VDVPVVYHELLQNYETSSSEEEEEEDSKSRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN
ECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK
DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKDSKRGEKK
IKRMKRRRRKIRRTLVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETE
RLTRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASS
HPNVTASFLPKICQRLGPLLDKELKPNFPGLKSLLSGGSQSLLRSEKSLAKSVLSSYDYI
ARQHGTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVF
CVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDK
TIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDIS
KTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE
EHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK
KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL
LSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLV
YGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPY
PPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVY
IQTSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHKIVVERINAFAEI
ESEEFIKESKKLFDSSTTTQPLVVKKEKKKKVVRQARTRAEYSEHIQDQYEDPDNLSLSG
SEESASDSDQSQVDVSDLCESSSSSGGTSSSDYSDWIHEGVNLEPPKRVRRHTKVKPIQV
SLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFKQGYQKYVDAVRSKGIYE
LSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMKPNGKLTNEFFNIKYHDM
PDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGYKILWDN
NERENLSPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIIT
GLEEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRY
LAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSEEEEEE
DSKSRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKL
DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTT
RLSEFAEEHLRRLTVRWNSHKNKENKKDSKRGEKKIKRMKRRRRKIRRTLVESDDEVLSR
KRRGKSTYENDFDFNPAGETKTKAESGNEQVEEVKTRVRRRSSNRSRSNSQDNEENDEED
VDIDNFDPEQPGPSTSYAEPVASTSRGRFAGRAAKRKFKEESASESQEDENSIPETDTTE
QPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLSLHDENEDEDNTNEMGKRKRTTR
LVKSNEPEDEEDDDDESDEDYSPSTHAVTKRKRSVRVEKSNEVDEDEESDEDYKP
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9598
(1915 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011785 - symbol:BRWD3 "BRWD3" species:7227 "Droso... 1525 2.4e-302 4
UNIPROTKB|Q6RI45 - symbol:BRWD3 "Bromodomain and WD repea... 1440 1.2e-270 5
MGI|MGI:3029414 - symbol:Brwd3 "bromodomain and WD repeat... 1449 1.7e-268 4
UNIPROTKB|E1BSG1 - symbol:BRWD1 "Uncharacterized protein"... 1413 2.4e-259 4
MGI|MGI:1932404 - symbol:Phip "pleckstrin homology domain... 1369 2.2e-258 4
UNIPROTKB|F1MTQ0 - symbol:BRWD1 "Uncharacterized protein"... 1412 2.3e-258 4
MGI|MGI:1890651 - symbol:Brwd1 "bromodomain and WD repeat... 1401 1.1e-257 5
UNIPROTKB|Q9NSI6 - symbol:BRWD1 "Bromodomain and WD repea... 1409 2.6e-257 4
RGD|1309030 - symbol:Brwd1 "bromodomain and WD repeat dom... 1386 1.3e-256 5
ZFIN|ZDB-GENE-050208-261 - symbol:phip "pleckstrin homolo... 1407 3.0e-255 3
UNIPROTKB|Q8WWQ0 - symbol:PHIP "PH-interacting protein" s... 1365 4.9e-255 3
UNIPROTKB|F1N8L6 - symbol:BRWD3 "Uncharacterized protein"... 1280 2.6e-253 4
UNIPROTKB|F1NXP9 - symbol:PHIP "Uncharacterized protein" ... 1306 5.4e-249 3
RGD|1559445 - symbol:Brwd3 "bromodomain and WD repeat dom... 1434 3.6e-248 3
UNIPROTKB|F1N1C9 - symbol:BRWD3 "Uncharacterized protein"... 1233 6.0e-247 5
UNIPROTKB|F1MPF7 - symbol:PHIP "Uncharacterized protein" ... 1240 1.4e-241 3
ZFIN|ZDB-GENE-041111-120 - symbol:brwd1 "bromodomain and ... 1204 8.7e-230 4
RGD|1564964 - symbol:Phip "pleckstrin homology domain int... 1069 2.7e-110 2
TAIR|locus:2061997 - symbol:AT2G47410 "AT2G47410" species... 317 1.1e-63 5
TAIR|locus:2158044 - symbol:AT5G49430 "AT5G49430" species... 281 6.8e-59 5
DICTYBASE|DDB_G0285837 - symbol:DDB_G0285837 "BRWD group ... 381 1.2e-41 7
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 190 6.5e-18 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 176 1.1e-16 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 176 2.1e-16 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 176 2.1e-16 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 176 2.1e-16 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 176 2.1e-16 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 176 2.1e-16 2
RGD|1307282 - symbol:Brd4 "bromodomain containing 4" spec... 154 5.8e-16 3
UNIPROTKB|I3L6E5 - symbol:BRD4 "Uncharacterized protein" ... 151 1.1e-15 3
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 177 1.4e-15 2
UNIPROTKB|E1BNS3 - symbol:BRD4 "Uncharacterized protein" ... 151 1.7e-15 3
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 176 1.8e-15 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 168 1.9e-15 3
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 168 7.4e-15 3
RGD|1303324 - symbol:Brd2 "bromodomain containing 2" spec... 145 1.1e-14 3
MGI|MGI:1888520 - symbol:Brd4 "bromodomain containing 4" ... 154 1.2e-14 3
UNIPROTKB|B0V072 - symbol:BRD2 "Bromodomain-containing pr... 145 1.6e-14 3
UNIPROTKB|O60885 - symbol:BRD4 "Bromodomain-containing pr... 154 1.7e-14 3
UNIPROTKB|B0V073 - symbol:BRD2 "Bromodomain-containing pr... 145 2.0e-14 3
UNIPROTKB|H9L005 - symbol:LOC100859056 "Uncharacterized p... 153 2.7e-14 2
MGI|MGI:99495 - symbol:Brd2 "bromodomain containing 2" sp... 145 3.5e-14 3
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 140 4.2e-14 2
UNIPROTKB|P25440 - symbol:BRD2 "Bromodomain-containing pr... 145 4.5e-14 3
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 166 4.7e-14 2
UNIPROTKB|H0Y5B5 - symbol:PBRM1 "Protein polybromo-1" spe... 179 6.8e-14 3
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 218 7.3e-14 1
UNIPROTKB|Q5TJG6 - symbol:BRD2 "Bromodomain-containing pr... 145 7.3e-14 3
UNIPROTKB|A5D9K6 - symbol:BRD2 "Uncharacterized protein" ... 145 7.3e-14 3
UNIPROTKB|H9L2H3 - symbol:LOC100859056 "Uncharacterized p... 153 8.1e-14 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 172 1.0e-13 3
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 150 1.1e-13 2
UNIPROTKB|Q32S26 - symbol:BRD2 "Bromodomain-containing pr... 145 1.5e-13 3
ZFIN|ZDB-GENE-010501-3 - symbol:pbrm1l "polybromo 1, like... 130 1.5e-13 3
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 153 2.0e-13 3
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 149 4.0e-13 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 147 4.1e-13 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 147 4.1e-13 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 145 4.3e-13 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 209 4.8e-13 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 145 5.3e-13 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 145 6.7e-13 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 144 7.0e-13 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 146 8.4e-13 2
MGI|MGI:1891374 - symbol:Brdt "bromodomain, testis-specif... 152 8.6e-13 3
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 145 9.3e-13 2
UNIPROTKB|Q86U86 - symbol:PBRM1 "Protein polybromo-1" spe... 147 1.5e-12 4
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 210 2.0e-12 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 202 2.1e-12 3
UNIPROTKB|E1BNH8 - symbol:E1BNH8 "Uncharacterized protein... 145 2.2e-12 4
UNIPROTKB|E2RRL7 - symbol:PBRM1 "Uncharacterized protein"... 145 2.4e-12 4
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 201 2.5e-12 1
RGD|1565549 - symbol:Pbrm1 "polybromo 1" species:10116 "R... 176 2.5e-12 4
FB|FBgn0004656 - symbol:fs(1)h "female sterile (1) homeot... 150 3.2e-12 4
MGI|MGI:1923998 - symbol:Pbrm1 "polybromo 1" species:1009... 143 4.2e-12 4
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 200 4.3e-12 1
UNIPROTKB|E7EVG2 - symbol:PBRM1 "Protein polybromo-1" spe... 147 4.9e-12 3
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 198 5.4e-12 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 177 5.6e-12 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 177 5.6e-12 1
UNIPROTKB|F1NLL8 - symbol:PBRM1 "Protein polybromo-1" spe... 145 5.7e-12 5
UNIPROTKB|Q90941 - symbol:PBRM1 "Protein polybromo-1" spe... 145 5.8e-12 5
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 173 6.1e-12 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 198 7.0e-12 1
UNIPROTKB|C9JJU3 - symbol:BRDT "Bromodomain testis-specif... 136 8.4e-12 4
UNIPROTKB|F1MMU3 - symbol:BRD3 "Uncharacterized protein" ... 141 8.6e-12 3
UNIPROTKB|E1BCG9 - symbol:Bt.104862 "Uncharacterized prot... 137 1.1e-11 3
UNIPROTKB|Q15059 - symbol:BRD3 "Bromodomain-containing pr... 142 1.1e-11 3
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 163 1.1e-11 3
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 163 1.1e-11 3
UNIPROTKB|B1Q2X3 - symbol:N-TAF1 "TAF1 RNA polymerase II,... 150 1.2e-11 4
UNIPROTKB|E2RRR3 - symbol:PBRM1 "Uncharacterized protein"... 145 1.3e-11 4
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 197 1.4e-11 1
UNIPROTKB|F1S033 - symbol:BRD3 "Uncharacterized protein" ... 141 1.4e-11 3
RGD|1306678 - symbol:Brdt "bromodomain, testis-specific" ... 147 1.8e-11 3
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 194 1.9e-11 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 149 2.0e-11 2
UNIPROTKB|Q60544 - symbol:TAF1 "Transcription initiation ... 153 2.1e-11 4
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 173 2.5e-11 3
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 189 2.6e-11 1
WARNING: Descriptions of 693 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0011785 [details] [associations]
symbol:BRWD3 "BRWD3" species:7227 "Drosophila melanogaster"
[GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IGI]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IGI] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:AE014297 GO:GO:0007095 GO:GO:0006911 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0046427 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HSSP:Q92793
FlyBase:FBgn0011785 RefSeq:NP_732982.1 UniGene:Dm.5099
ProteinModelPortal:Q9VC96 SMR:Q9VC96 IntAct:Q9VC96 STRING:Q9VC96
EnsemblMetazoa:FBtr0084604 GeneID:42898 KEGG:dme:Dmel_CG31132
UCSC:CG31132-RA InParanoid:Q9VC96 OMA:KSRFENH PhylomeDB:Q9VC96
GenomeRNAi:42898 NextBio:831161 ArrayExpress:Q9VC96 Bgee:Q9VC96
Uniprot:Q9VC96
Length = 2232
Score = 1525 (541.9 bits), Expect = 2.4e-302, Sum P(4) = 2.4e-302
Identities = 310/638 (48%), Positives = 415/638 (65%)
Query: 305 LDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNV 364
L EL LI K+L GP E AKVL +E K +LP R DW+G H QT E+ + ++
Sbjct: 12 LKPELYFLISKFLAAGPLEETAKVLIRELEEKKVLPRRLDWQGNEHEQTFEELERKYKHI 71
Query: 365 TASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH 424
A+ L +IC RLGPL+D+EL P+ P ++++ S DY R +
Sbjct: 72 GANHLLEICSRLGPLVDRELPPSVPGINSLLGTGRQNLLRTKETVYCH-RSLRDYCTRLN 130
Query: 425 GTSLLVPNSV---KVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFC 481
G SL P+SV HN VL RE+ G + R L++ + Y + +GHLS+V+C
Sbjct: 131 GVSL--PDSVLTKPTHNLDRVLTGREHGGEVRRKLLVPTDLYRRTKLLRRTVGHLSSVYC 188
Query: 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541
VLFD+ G I+TGADDLLIK+W A DG+LLATLRG S EI+DIAI+ N +LAAG++D
Sbjct: 189 VLFDRTGRYIITGADDLLIKIWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSLDHI 248
Query: 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601
+R+W++QT +PI+VL H G+IT VNFCP + YL +TSTDG I FW+Y
Sbjct: 249 LRVWDMQTTSPIAVLSAHTGMITSVNFCPSPRSDLKYLVTTSTDGSIAFWQYSTPRGQKI 308
Query: 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE 661
T +P ++E++RPG A ++C++FSPGG+FLA GS DHHVRVY M G D P ILE E
Sbjct: 309 TFAPKPTQYHEKLRPGQAQMMCTTFSPGGIFLAAGSADHHVRVYMM-GEDGPKRILETEA 367
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
++D VDS+QWSH LRF+SGS+DGTA IW ++ QW+ +L M L E E K+
Sbjct: 368 YTDAVDSVQWSHRGLRFISGSKDGTAHIWTFESQQWKSSKLCMTERLASCPEP--EEGKR 425
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 781
+KVTMVAWDASDR+VITA+N +F IKIWD+ + L +VL+GH +E++VLES+P D VLL
Sbjct: 426 LKVTMVAWDASDRYVITAVN-DFTIKIWDSKSAKLHRVLRGHKDELYVLESNPRDEHVLL 484
Query: 782 SAGHDGLIIIWDILSSKQRGY--KWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLL 839
SAGHDG + +WDI ++G F N ++GQG G++FD KWSPDGT A TDS+GH+L
Sbjct: 485 SAGHDGQVFLWDI----EQGVCVANFLNDIDGQGHGSVFDAKWSPDGTMIAATDSHGHIL 540
Query: 840 VYGLGG-FKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGT 898
++GLG ++ + +P ELFFHTD+R L R DE T + PHLMPPPFLVD +G
Sbjct: 541 IFGLGVCIEKYKMLPTELFFHTDFRPLLRDAQ--HHVVDEQTQIMPHLMPPPFLVDADGN 598
Query: 899 PYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEG 936
P+P QR VPGRE+ +L+P++T DG V I +G
Sbjct: 599 PHPSRFQRFVPGRESCSLDQLIPNLTVGVDG-VVIDDG 635
Score = 1365 (485.6 bits), Expect = 2.4e-302, Sum P(4) = 2.4e-302
Identities = 251/510 (49%), Positives = 345/510 (67%)
Query: 1150 EVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPW 1209
E+P++Y+P++WL+EV+P+KAPYYPQMGDEV++F+QG+ KY+DAVR K +Y+LS S PW
Sbjct: 985 EIPELYRPAEWLSEVIPRKAPYYPQMGDEVVYFRQGHAKYLDAVRLKKVYKLSH-SSEPW 1043
Query: 1210 GNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMKPNGKLTNEFFNIKYHDMPDVIDFFVL 1269
L++ ELV+V+GIKYEI PPR+CCLKLA++ G +T F IKYHDMPDV+DF VL
Sbjct: 1044 NFHTLRDHELVRVIGIKYEIRPPRLCCLKLAIIDEEGNMTGTTFKIKYHDMPDVLDFLVL 1103
Query: 1270 RQIYETAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTK----SPFLGYKILWDNNEREN 1325
RQ ++ A+ R W++GDRF MI D WW G IE + + + S F+ +++ WDN E E
Sbjct: 1104 RQTFDLAVQRNWSIGDRFRCMIVDGWWMGQIESRHALSADFPDSSFMCFRVRWDNGEYEF 1163
Query: 1326 LSPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEV 1385
+SPWD+EP + + E GG++PV PEEI+ LY P+ +EW +GDRD TC +II GLE+V
Sbjct: 1164 MSPWDMEPIDQQRVPDEVGGAVPVLPEEIRATLYQPKSEEWHRGDRDGTCRRIINGLEQV 1223
Query: 1386 MGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANA 1445
M LS+AE FL PVD++ DLTT+++RF+N FYRRITSAQFDVRYLA NA
Sbjct: 1224 MRLSIAEHFLAPVDLNIYPDYAYLIEYPIDLTTIKSRFENHFYRRITSAQFDVRYLATNA 1283
Query: 1446 EKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXR 1505
E++N H+ IVK++RI+TDL LRII+EP+ +DV VYH+L Y
Sbjct: 1284 EQYNRRHAIIVKHSRIVTDLCLRIIREPDEIDVAAVYHQLADVYHSSESENEVDSDVVP- 1342
Query: 1506 QRRVRPT--AVTRAQRE----AMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDK 1559
PT A A R+ A ++ +W+ +CR++L+ +W DS PFR+PVD
Sbjct: 1343 STSTGPTTSAAAAAARQRVSSARRSTRIHSEGDWRADCRQLLDLMWARTDSAPFREPVDT 1402
Query: 1560 LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMT 1619
+D PDY +I+ PMDL T++E+L G NY+ P+DF KDV+ +F NS+NYN NKRS+IY MT
Sbjct: 1403 IDFPDYLEIIATPMDLRTVKEDLLGGNYDDPLDFAKDVRLIFQNSKNYNTNKRSRIYAMT 1462
Query: 1620 TRLSEFAEEHLRRLTVRWNSHKNKENKKDS 1649
RLS E H++ + W + + NK S
Sbjct: 1463 LRLSALFESHIKTVVTSWKAALRRANKNKS 1492
Score = 578 (208.5 bits), Expect = 2.3e-48, Sum P(3) = 2.3e-48
Identities = 111/240 (46%), Positives = 153/240 (63%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
LTT+++RF+N FYRRITSAQFDVRYLA NAE++N H+ IVK++RI+TDL LRII+EP+
Sbjct: 1254 LTTIKSRFENHFYRRITSAQFDVRYLATNAEQYNRRHAIIVKHSRIVTDLCLRIIREPDE 1313
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPT--AVTRAQRE----AMNQKKLKR 114
+DV VYH+L Y PT A A R+ A ++
Sbjct: 1314 IDVAAVYHQLADVYHSSESENEVDSDVVP-STSTGPTTSAAAAAARQRVSSARRSTRIHS 1372
Query: 115 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYES 174
+W+ +CR++L+ +W DS PFR+PVD +D PDY +I+ PMDL T++E+L G NY+
Sbjct: 1373 EGDWRADCRQLLDLMWARTDSAPFREPVDTIDFPDYLEIIATPMDLRTVKEDLLGGNYDD 1432
Query: 175 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKDS 234
P+DF KDV+ +F NS+NYN NKRS+IY MT RLS E H++ + W + + NK S
Sbjct: 1433 PLDFAKDVRLIFQNSKNYNTNKRSRIYAMTLRLSALFESHIKTVVTSWKAALRRANKNKS 1492
Score = 56 (24.8 bits), Expect = 1.0e-158, Sum P(2) = 1.0e-158
Identities = 24/90 (26%), Positives = 36/90 (40%)
Query: 1746 FDPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPE--TDTTE--- 1800
+D P P E V+S S E+S+ ES+ D + + DT
Sbjct: 873 YDEVAPPPEEE-EEDVSSNSSGDTSYSNVEENL-EDSSDESETDSSDYSDWVADTPGPNL 930
Query: 1801 QPAKKLKVLYPKRRGQQSEDGSGDNASEMS 1830
+P K+ K RR + S+D S D + S
Sbjct: 931 EPPKRSKRKPLSRRPRSSDDSSDDERAGRS 960
Score = 51 (23.0 bits), Expect = 2.4e-302, Sum P(4) = 2.4e-302
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 1116 WIHE--GVNLEPPKRVRR 1131
W+ + G NLEPPKR +R
Sbjct: 921 WVADTPGPNLEPPKRSKR 938
Score = 43 (20.2 bits), Expect = 2.4e-302, Sum P(4) = 2.4e-302
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1673 SDDEVLSRKRRGKSTYENDFDFNPAGETKTKAESGNE 1709
S V++R+ RG+++ N D + E ++ G +
Sbjct: 2019 SASNVVTRRLRGRASQANSHDEDHEEEEAAASDEGTD 2055
Score = 42 (19.8 bits), Expect = 6.3e-163, Sum P(4) = 6.3e-163
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1350 EPEEIQELLYHPRPDEWPQGDRDATCE 1376
+ EE +E+L P D+ P R A +
Sbjct: 1833 DSEEAEEILPTPTKDDLPSTSRAALAQ 1859
Score = 41 (19.5 bits), Expect = 3.8e-302, Sum P(4) = 3.8e-302
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 1780 EESASESQEDENS 1792
EE+AS SQ DE++
Sbjct: 1712 EEAASHSQHDEST 1724
Score = 38 (18.4 bits), Expect = 6.9e-160, Sum P(3) = 6.9e-160
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1782 SASESQEDENSIPETDT 1798
S SE++ D + +P T T
Sbjct: 1330 SESENEVDSDVVPSTST 1346
Score = 38 (18.4 bits), Expect = 7.8e-159, Sum P(3) = 7.8e-159
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 1749 EQPGPSTSYAEPVA 1762
+Q GPS AEP A
Sbjct: 743 DQAGPSQPPAEPAA 756
Score = 37 (18.1 bits), Expect = 1.0e-156, Sum P(2) = 1.0e-156
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 926 NDDGHVEIVEGSERNGERPVEVE 948
N D H E S+ + ER E E
Sbjct: 2176 NGDAHASSQERSQASTERDQEEE 2198
Score = 37 (18.1 bits), Expect = 3.2e-47, Sum P(3) = 3.2e-47
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 258 SDDEVLSRKRRGKSTYENDFD 278
S V++R+ RG+++ N D
Sbjct: 2019 SASNVVTRRLRGRASQANSHD 2039
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 1440 (512.0 bits), Expect = 1.2e-270, Sum P(5) = 1.2e-270
Identities = 299/658 (45%), Positives = 413/658 (62%)
Query: 303 TRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHP 362
T+++ EL LI ++L+ GPC+++A+VL +E L+P R DWEG H ++ ++ +++
Sbjct: 6 TQIEAELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDLVAANA 65
Query: 363 NVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIAR 422
++ +L KIC+R+GPLLDKE+ + P K ++ + + A
Sbjct: 66 HIPPDYLLKICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAAL 125
Query: 423 QHGTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFC 481
G +P N VK N VN+ +R+ +G + S Y +++ H LGHLS+V+C
Sbjct: 126 HRGRPPELPVNYVKPPNVVNITSARQLTGCSRFGHIFPSSAYQHIKMHKRILGHLSSVYC 185
Query: 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541
V FD+ G I TG+DD L+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK
Sbjct: 186 VAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKV 245
Query: 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN-YLASTSTDGCIGFWKYKLDIDIS 600
+R+W L+T AP++VL GH IT + FCP G N YL ST DG I FW++ +
Sbjct: 246 VRVWCLRTCAPVAVLQGHSASITSIQFCP-STKGTNRYLTSTGADGTICFWQWHV----- 299
Query: 601 KTV-FHE-PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILE 658
KT+ F + PV F ER RPG I CSSFS GG+F+ TGS DH +R+Y + G + P I E
Sbjct: 300 KTMKFRDRPVKFTERSRPG-VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEVPEKIAE 357
Query: 659 VEEHSDKVDSIQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSD 716
+E H+DKV ++Q+ ++ LRFVSGSRDGTA IW Y+ +W+ I LDM T + S
Sbjct: 358 LESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLPSG 417
Query: 717 ETN-KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPF 775
E K+KVTMVAWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPF
Sbjct: 418 EDKITKLKVTMVAWDRYDTTVITAVN-NFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPF 476
Query: 776 DSRVLLSAGHDGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDS 834
D R++LSAGHDG I IWD+ +K R Y N++EGQG GA+FD K+SPDG A TDS
Sbjct: 477 DQRIILSAGHDGNIFIWDLDRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDS 533
Query: 835 YGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVD 894
+GHLL++G G K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD
Sbjct: 534 HGHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVD 591
Query: 895 LNGTPYPPEVQRLVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 949
++G P+P + QRLVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 592 VDGNPHPTKFQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDG 649
Score = 950 (339.5 bits), Expect = 1.2e-270, Sum P(5) = 1.2e-270
Identities = 197/498 (39%), Positives = 284/498 (57%)
Query: 1124 EPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFK 1183
E K+ ++ K K VS+ + P E + + P W+ + +P+++P+ PQMGDE+++F+
Sbjct: 896 ERQKKPKQTRKKKGGLVSIAGE--PNE--EWFAPQ-WILDTIPRRSPFVPQMGDELIYFR 950
Query: 1184 QGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMK 1243
QG++ YV AVR IY ++ L+ PW + L+E E VK+VGIKYE+ PP +CCLKLA +
Sbjct: 951 QGHEAYVRAVRKSKIYSVN-LQKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLD 1009
Query: 1244 P-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIEG 1302
P +GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDAWW+GT+E
Sbjct: 1010 PISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVES 1069
Query: 1303 K----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKE-ATEPGGSLPVEPEEIQEL 1357
+ P S F Y + WDNNERE +SPWD+EP EG E G +PV EE+ L
Sbjct: 1070 QQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTAL 1129
Query: 1358 LYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLT 1417
LY P+ EW RD CE++I G+ ++ L A PF VPVD+S DL
Sbjct: 1130 LYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLN 1189
Query: 1418 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVD 1477
T+R R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I + + D
Sbjct: 1190 TIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTD 1249
Query: 1478 VPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNEC 1537
+ Y+++ ++ + + Q P WK +C
Sbjct: 1250 ILDTYNKIKAEERNSTDAEEDTEIVDLDSDGPGTSSGRKVKCRGRRQSLKCNPDAWKKQC 1309
Query: 1538 REVLETLWVCPDSEPFRKPVDKLDHPDY--------DKIVIAPMDLGTIREELRGDNYES 1589
+E+L ++ DSEPFR+P D L +P + + +V ++ E+ + D ++
Sbjct: 1310 KELLSLIYEREDSEPFRQPADLLSYPGHQEQEGESSESVVPERQQDSSLSEDYQ-DVIDT 1368
Query: 1590 PIDFVKDVKRVFHNSRNY 1607
P+DF VK + NY
Sbjct: 1369 PVDF-STVKETLE-AGNY 1384
Score = 247 (92.0 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 61/200 (30%), Positives = 99/200 (49%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+R R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I + +
Sbjct: 1188 LNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSC 1247
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
D+ Y+++ ++ + + Q P WK
Sbjct: 1248 TDILDTYNKIKAEERNSTDAEEDTEIVDLDSDGPGTSSGRKVKCRGRRQSLKCNPDAWKK 1307
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHPDY--------DKIVIAPMDLGTIREELRGDNY 172
+C+E+L ++ DSEPFR+P D L +P + + +V ++ E+ + D
Sbjct: 1308 QCKELLSLIYEREDSEPFRQPADLLSYPGHQEQEGESSESVVPERQQDSSLSEDYQ-DVI 1366
Query: 173 ESPIDFVKDVKRVFHNSRNY 192
++P+DF VK + NY
Sbjct: 1367 DTPVDF-STVKETLE-AGNY 1384
Score = 187 (70.9 bits), Expect = 1.2e-270, Sum P(5) = 1.2e-270
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 1552 PFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 1611
P R+ L DY ++ P+D T++E L NY SP++F KDV+++F+NS+ Y NK
Sbjct: 1350 PERQQDSSLSE-DYQDVIDTPVDFSTVKETLEAGNYGSPLEFYKDVRQIFNNSKAYTSNK 1408
Query: 1612 RSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 1647
+S+IY M RLS E H++ + + S + ++
Sbjct: 1409 KSRIYSMMLRLSALFESHIKNIISEYKSAIQSQKRR 1444
Score = 187 (70.9 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 137 PFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNK 196
P R+ L DY ++ P+D T++E L NY SP++F KDV+++F+NS+ Y NK
Sbjct: 1350 PERQQDSSLSE-DYQDVIDTPVDFSTVKETLEAGNYGSPLEFYKDVRQIFNNSKAYTSNK 1408
Query: 197 RSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 232
+S+IY M RLS E H++ + + S + ++
Sbjct: 1409 KSRIYSMMLRLSALFESHIKNIISEYKSAIQSQKRR 1444
Score = 100 (40.3 bits), Expect = 1.6e-162, Sum P(4) = 1.6e-162
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 1536 ECREVLETL--WVCPD-SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 1592
EC V++ + + D + PF PVD +P Y +V P DL TIR L Y
Sbjct: 1146 ECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISA 1205
Query: 1593 FVKDVKRVFHNSRNYNQ 1609
+ +V+ + HN+R +N+
Sbjct: 1206 LMWEVRYIEHNARTFNE 1222
Score = 100 (40.3 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 121 ECREVLETL--WVCPD-SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
EC V++ + + D + PF PVD +P Y +V P DL TIR L Y
Sbjct: 1146 ECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISA 1205
Query: 178 FVKDVKRVFHNSRNYNQ 194
+ +V+ + HN+R +N+
Sbjct: 1206 LMWEVRYIEHNARTFNE 1222
Score = 54 (24.1 bits), Expect = 1.2e-270, Sum P(5) = 1.2e-270
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVK 1136
W + G+NL+PPKR R T K
Sbjct: 860 WTADAGINLQPPKRQTRQTTRK 881
Score = 50 (22.7 bits), Expect = 1.7e-150, Sum P(2) = 1.7e-150
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
E+S S S+EDE + E P + QSE S D++SE S+ D
Sbjct: 818 EDSDSSSEEDETVGTSDASVEDPVVEW----------QSESSSSDSSSEYSDWTAD 863
Score = 37 (18.1 bits), Expect = 1.2e-270, Sum P(5) = 1.2e-270
Identities = 13/63 (20%), Positives = 22/63 (34%)
Query: 1641 KNKENKKDSXXXXXXXXXXXXXXXXXXXTLVESDDEVLSRKRRGKSTYENDFDFNPAGET 1700
+ KE K+ S +SD E S R + + D D++ +T
Sbjct: 1591 EKKETKEKSHLSTSESGELGSSLSSESTCGSDSDSE--STSRTDQDYVDGDHDYSKFIQT 1648
Query: 1701 KTK 1703
+ K
Sbjct: 1649 RPK 1651
Score = 37 (18.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 13/63 (20%), Positives = 22/63 (34%)
Query: 226 KNKENKKDSXXXXXXXXXXXXXXXXXXXTLVESDDEVLSRKRRGKSTYENDFDFNPAGET 285
+ KE K+ S +SD E S R + + D D++ +T
Sbjct: 1591 EKKETKEKSHLSTSESGELGSSLSSESTCGSDSDSE--STSRTDQDYVDGDHDYSKFIQT 1648
Query: 286 KTK 288
+ K
Sbjct: 1649 RPK 1651
>MGI|MGI:3029414 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:3029414 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HOVERGEN:HBG108248
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AK050539
EMBL:AK139563 EMBL:AK163354 EMBL:BX000698 EMBL:AL731764
EMBL:BC082562 IPI:IPI00652540 IPI:IPI00660178 IPI:IPI00750468
RefSeq:NP_001074946.1 UniGene:Mm.100112 UniGene:Mm.426127
ProteinModelPortal:A2AHJ4 SMR:A2AHJ4 PhosphoSite:A2AHJ4
PRIDE:A2AHJ4 Ensembl:ENSMUST00000101283 Ensembl:ENSMUST00000150434
GeneID:382236 KEGG:mmu:382236 UCSC:uc009ucm.1 UCSC:uc009ucn.1
HOGENOM:HOG000203884 InParanoid:A2AHJ4 ChiTaRS:BRWD3 NextBio:403145
Bgee:A2AHJ4 CleanEx:MM_BRWD3 Genevestigator:A2AHJ4 Uniprot:A2AHJ4
Length = 1799
Score = 1449 (515.1 bits), Expect = 1.7e-268, Sum P(4) = 1.7e-268
Identities = 299/657 (45%), Positives = 413/657 (62%)
Query: 303 TRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHP 362
T+++ EL LI ++L+ GPC+++A+VL +E L+P R DWEG H ++ ++ +++
Sbjct: 6 TQIEAELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDLVAANA 65
Query: 363 NVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIAR 422
++ +L KIC+R+GPLLDKE+ + P K ++ + + A
Sbjct: 66 HIPPDYLLKICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAAL 125
Query: 423 QHGTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFC 481
G +P N VK N VN+ +R+ +G S + S Y +++ H LGHLS+V+C
Sbjct: 126 HRGRPPELPVNYVKPPNVVNITSARQLTGCSRFSHVFPSSAYQHIKMHKRILGHLSSVYC 185
Query: 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541
V FD+ G I TG+DD L+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK
Sbjct: 186 VAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKV 245
Query: 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601
+R+W L+T AP++VL GH IT + FCP YL ST DG I FW++ + K
Sbjct: 246 VRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHV-----K 300
Query: 602 TV-FHE-PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 659
T+ F + PV F ER RPG I CSSFS GG+F+ TGS DH +R+Y + G + P I E+
Sbjct: 301 TMKFRDRPVKFTERSRPG-VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEIPEKIAEL 358
Query: 660 EEHSDKVDSIQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717
E H+DKV ++Q+ ++ LRFVSGSRDGTA IW Y+ +W+ I LDM T + TS E
Sbjct: 359 ESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMSGNNLTSAE 418
Query: 718 TN-KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD 776
K+KVTMVAWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD
Sbjct: 419 DKVTKLKVTMVAWDRYDTTVITAVN-NFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFD 477
Query: 777 SRVLLSAGHDGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 835
R++LSAGHDG I IWD+ +K R Y N++EGQG GA+FD K+SPDG A TDS+
Sbjct: 478 QRIILSAGHDGNIFIWDLDRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDSH 534
Query: 836 GHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDL 895
GHLL++G G K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD+
Sbjct: 535 GHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDV 592
Query: 896 NGTPYPPEVQRLVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 949
+G P+P + QRLVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 593 DGNPHPTKFQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQEESILDG 649
Score = 942 (336.7 bits), Expect = 1.7e-268, Sum P(4) = 1.7e-268
Identities = 201/504 (39%), Positives = 286/504 (56%)
Query: 1119 EGVNLEPPKRVRRHTKVKPIQ-VSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGD 1177
E + LE ++ + TK K VS+ + P E + P W+ + +P+++P+ PQMGD
Sbjct: 888 ENLKLEDRQKKPKQTKKKKGGLVSMAGE--PNE--EWLAPQ-WILDTIPRRSPFVPQMGD 942
Query: 1178 EVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCL 1237
E+++F+QG++ YV AVR IY ++ L+ PW + L+E E VK+VGIKYEI PP +CCL
Sbjct: 943 ELIYFRQGHEAYVRAVRKSKIYSVN-LQKQPWNKMDLREQEFVKIVGIKYEIGPPTLCCL 1001
Query: 1238 KLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWW 1296
KLA + P +GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDAWW
Sbjct: 1002 KLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWW 1061
Query: 1297 WGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKE-ATEPGGSLPVEP 1351
+GT+E + P S F Y + WDNNERE +SPWD+EP +G E G +PV
Sbjct: 1062 FGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPDGTAFPDEVGAGIPVSQ 1121
Query: 1352 EEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXX 1411
EE+ LLY P+ EW RD CE++I G+ ++ L A PF VPVD+S
Sbjct: 1122 EELTALLYKPQEGEWGAHSRDEECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCTVVA 1181
Query: 1412 XXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK 1471
DL T++ R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I
Sbjct: 1182 YPTDLNTIKQRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIG 1241
Query: 1472 EPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPF 1531
+ + D+ Y+++ ++ RA+ Q P
Sbjct: 1242 DQSCSDILDTYNKIKAEDPDSSDLEEDSEMVDLDSDGPGTSSGRRAKCRGRRQSLKCNPD 1301
Query: 1532 NWKNECREVLETLWVCPDSEPFRKPVDKLDHP-----DYDKIVIAPMDLG--TIREELRG 1584
WK +C E+L ++ DSEPFR+P D +P + + P D ++ E+ +
Sbjct: 1302 AWKKQCEELLSLIYEREDSEPFRQPADPQSYPVQQQQEGESSQSVPPDRQDPSLSEDYQ- 1360
Query: 1585 DNYESPIDFVKDVKRVFHNSRNYN 1608
D ++P+DF VK S NY+
Sbjct: 1361 DGIDTPMDF-STVKETLE-SGNYD 1382
Score = 241 (89.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 63/200 (31%), Positives = 99/200 (49%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I + +
Sbjct: 1186 LNTIKQRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSC 1245
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
D+ Y+++ ++ RA+ Q P WK
Sbjct: 1246 SDILDTYNKIKAEDPDSSDLEEDSEMVDLDSDGPGTSSGRRAKCRGRRQSLKCNPDAWKK 1305
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHP-----DYDKIVIAPMDLG--TIREELRGDNYE 173
+C E+L ++ DSEPFR+P D +P + + P D ++ E+ + D +
Sbjct: 1306 QCEELLSLIYEREDSEPFRQPADPQSYPVQQQQEGESSQSVPPDRQDPSLSEDYQ-DGID 1364
Query: 174 SPIDFVKDVKRVFHNSRNYN 193
+P+DF VK S NY+
Sbjct: 1365 TPMDF-STVKETLE-SGNYD 1382
Score = 191 (72.3 bits), Expect = 1.7e-268, Sum P(4) = 1.7e-268
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 1556 PVDKLD---HPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 1612
P D+ D DY + PMD T++E L NY+SP++F KDV+++F NS+ Y NK+
Sbjct: 1347 PPDRQDPSLSEDYQDGIDTPMDFSTVKETLESGNYDSPLEFYKDVRQIFSNSKAYTSNKK 1406
Query: 1613 SKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 1647
S+IY MT RLS E H++ + + S + ++
Sbjct: 1407 SRIYSMTLRLSALFENHIKNIISDYKSAIQSQKRR 1441
Score = 191 (72.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 141 PVDKLD---HPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 197
P D+ D DY + PMD T++E L NY+SP++F KDV+++F NS+ Y NK+
Sbjct: 1347 PPDRQDPSLSEDYQDGIDTPMDFSTVKETLESGNYDSPLEFYKDVRQIFSNSKAYTSNKK 1406
Query: 198 SKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 232
S+IY MT RLS E H++ + + S + ++
Sbjct: 1407 SRIYSMTLRLSALFENHIKNIISDYKSAIQSQKRR 1441
Score = 100 (40.3 bits), Expect = 6.7e-161, Sum P(3) = 6.7e-161
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 1536 ECREVLE---TLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 1592
EC V++ L + PF PVD +P Y +V P DL TI++ L Y
Sbjct: 1144 ECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIKQRLENRFYRRISA 1203
Query: 1593 FVKDVKRVFHNSRNYNQ 1609
+ +V+ + HN+R +N+
Sbjct: 1204 LMWEVRYIEHNARTFNE 1220
Score = 100 (40.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 121 ECREVLE---TLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
EC V++ L + PF PVD +P Y +V P DL TI++ L Y
Sbjct: 1144 ECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIKQRLENRFYRRISA 1203
Query: 178 FVKDVKRVFHNSRNYNQ 194
+ +V+ + HN+R +N+
Sbjct: 1204 LMWEVRYIEHNARTFNE 1220
Score = 55 (24.4 bits), Expect = 1.7e-268, Sum P(4) = 1.7e-268
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVK 1136
WI + G+NL+PPKR R K
Sbjct: 859 WIADAGINLQPPKRQTRQATQK 880
Score = 48 (22.0 bits), Expect = 3.1e-151, Sum P(2) = 3.1e-151
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSE 1831
E+S S S+EDE + E P + QSE S D++SE S+
Sbjct: 817 EDSDSSSEEDETVGTSDASVEDPVVEW----------QSESSSSDSSSEYSD 858
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 1413 (502.5 bits), Expect = 2.4e-259, Sum P(4) = 2.4e-259
Identities = 288/638 (45%), Positives = 397/638 (62%)
Query: 305 LDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNV 364
++ EL LI ++L GPC +VL +E LLP+R DWEG H ++ E+ S+ +V
Sbjct: 17 IESELYFLIARFLSTGPCRGTLRVLVQELEQHQLLPKRLDWEGNEHYRSYEELVLSNKHV 76
Query: 365 TASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH 424
L +IC+R+GP+LDKE+ P+ K +V + A
Sbjct: 77 APDHLLQICKRIGPILDKEIPPSISRVNSLLGAGRQSLLRTAKDCRNTVWKGSAFAALHR 136
Query: 425 GTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVL 483
G P N N V V R+R+ +G S Y +++ H LGHLS+V+CV
Sbjct: 137 GRPPEFPVNYGTPPNLVEVYRARQLTGYAKFSTSFPGSMYQHVKMHRRILGHLSSVYCVA 196
Query: 484 FDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIR 543
FD+ G I TG+DD L+K+W +G+L ATLRG S EISD+A++ N ++AAG+ DK IR
Sbjct: 197 FDRTGHRIFTGSDDCLVKIWSTHNGRLFATLRGHSAEISDMAVNYENTMIAAGSCDKMIR 256
Query: 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+W L+T AP++VL GH G IT + F P+ Y+ ST DG + FW++ D S
Sbjct: 257 VWCLRTCAPVAVLHGHTGSITSLQFSPMVKGSLRYMVSTGADGNVCFWQWDTD---SMKF 313
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663
+ PV F E+ RPG +LCSSFS GG+FLATGS DH +R+Y G ++P I E+E H+
Sbjct: 314 SNRPVKFTEKPRPG-VQMLCSSFSVGGMFLATGSTDHVIRMYYF-GSETPERIAELESHA 371
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723
DKVDSIQ+S+S RF+SGSRDGTA IW ++ ++WR I LDM+ LP + ++ + K
Sbjct: 372 DKVDSIQFSNSGDRFISGSRDGTARIWRFEEAEWRSILLDMSDRLPGDMCSDEDKFMRPK 431
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
VTM+AW+ D +V+TA+N N +K+W++ G L+ L GH +EVFVLE+HPFDSR++LSA
Sbjct: 432 VTMIAWNQDDNYVVTAVN-NHLLKVWNSSTGQLLHDLVGHADEVFVLETHPFDSRIMLSA 490
Query: 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
GHDG I IWDI +K K + N++EGQG GA+FD K+SPDG A TDS+GHLL++G
Sbjct: 491 GHDGNIFIWDI--TKGTKTKHYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLLIFGF 548
Query: 844 GGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPE 903
G K + IP ++FFHTDYR L R + + DE T PHLMPPPFLVD++G P+P +
Sbjct: 549 GCSKPYEKIPDQMFFHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTK 606
Query: 904 VQRLVPGRENADDTELLPD---ITTNDDGHVEIVEGSE 938
QRLVPGREN+ D L+P + T+D VE V G +
Sbjct: 607 YQRLVPGRENSADEHLIPQLGYVATSDGEVVEQVIGQQ 644
Score = 1075 (383.5 bits), Expect = 2.4e-259, Sum P(4) = 2.4e-259
Identities = 217/538 (40%), Positives = 319/538 (59%)
Query: 1125 PPKRVRRHTKVKPIQ-----VSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEV 1179
PPKR RR + KP + P Q + E+ + P W+ + +++P+ PQMGDEV
Sbjct: 909 PPKRRRRKRRKKPRPKKQEGANTPTQPVNSELSYDWHPPVWITDTALRRSPFVPQMGDEV 968
Query: 1180 MFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKL 1239
++F+QG++ Y++AVR IYEL+ PW ++L++ ELVK+VGI+YE+ PP +CCLKL
Sbjct: 969 IYFRQGHEAYIEAVRRNNIYELNP-HKEPWRKVVLRDQELVKIVGIRYEVGPPTLCCLKL 1027
Query: 1240 AVMK-PNGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWG 1298
A + GK T++ F+IKYHDMPDVIDF +LRQ Y+ A R W DRF S+IDDAWW+G
Sbjct: 1028 AFIDHATGKHTDKSFSIKYHDMPDVIDFLILRQFYDEARQRNWQASDRFRSIIDDAWWFG 1087
Query: 1299 TIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKEATEP-GGSLPVEPEE 1353
T+ G+ P S F Y + WDN E E LSPWD+EP + + E G S+ V EE
Sbjct: 1088 TVLGQEPYQPQYPDSHFQCYSVKWDNGEVEKLSPWDMEPISDNVDQPEELGASVSVTFEE 1147
Query: 1354 IQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXX 1413
+++LLY P EW RD CE+II+G+++++ L ++ F PVD+
Sbjct: 1148 MEKLLYKPEEGEWGMRSRDEACERIISGIDQLLTLDISAAFAGPVDLCTYPKYCTVIAYP 1207
Query: 1414 XDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEP 1473
DL T+R R NRFYRRI++ ++VRY+ +NA FNEP S I + A+ IT LL+ I
Sbjct: 1208 TDLNTIRTRLANRFYRRISALVWEVRYIESNARTFNEPGSAIARAAKKITTQLLKFI--- 1264
Query: 1474 NPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRP-TAVTRAQREAMNQKKLKRPFN 1532
N D ++ +L + RP T+ R + K +K ++
Sbjct: 1265 NDQDCTNIF-DLCST---TDDEQDCLDADDLDDEKCRPRTSYRRRKGRGKRGKSMKNGYD 1320
Query: 1533 ---WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYES 1589
WK +C E++ ++ C DSEPFR+PVD +PDY I+ PMD GT++E L NY++
Sbjct: 1321 ENCWKKQCMELVNLIFQCEDSEPFRQPVDLDQYPDYRHIIDTPMDFGTVKETLEAGNYDT 1380
Query: 1590 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 1647
P++ KD++ +F N+++Y NK+SKIY MT RLS EE +RR+ + + + K+N+K
Sbjct: 1381 PMELCKDIRLIFSNAKSYTPNKKSKIYSMTLRLSALFEEKIRRIVSDFKNGQ-KQNEK 1437
Score = 406 (148.0 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 88/236 (37%), Positives = 135/236 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+R R NRFYRRI++ ++VRY+ +NA FNEP S I + A+ IT LL+ I N
Sbjct: 1210 LNTIRTRLANRFYRRISALVWEVRYIESNARTFNEPGSAIARAAKKITTQLLKFI---ND 1266
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRP-TAVTRAQREAMNQKKLKRPFN-- 117
D ++ +L + RP T+ R + K +K ++
Sbjct: 1267 QDCTNIF-DLCST---TDDEQDCLDADDLDDEKCRPRTSYRRRKGRGKRGKSMKNGYDEN 1322
Query: 118 -WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPI 176
WK +C E++ ++ C DSEPFR+PVD +PDY I+ PMD GT++E L NY++P+
Sbjct: 1323 CWKKQCMELVNLIFQCEDSEPFRQPVDLDQYPDYRHIIDTPMDFGTVKETLEAGNYDTPM 1382
Query: 177 DFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 232
+ KD++ +F N+++Y NK+SKIY MT RLS EE +RR+ + + + K+N+K
Sbjct: 1383 ELCKDIRLIFSNAKSYTPNKKSKIYSMTLRLSALFEEKIRRIVSDFKNGQ-KQNEK 1437
Score = 63 (27.2 bits), Expect = 6.6e-147, Sum P(2) = 6.6e-147
Identities = 28/103 (27%), Positives = 43/103 (41%)
Query: 903 EVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQ 962
EV+ V +EN +D++ T +D + SE N +VE R++ G
Sbjct: 2052 EVEIEVTKKENDNDSQTKR--TESDAALKNTFDSSEENSTNH-KVENGRNWRTSGQSTSA 2108
Query: 963 TSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLS 1005
+H HV S S A T A +++ +KRL LS
Sbjct: 2109 YNH-HVSNSEEEVSSELAKRETKTIRRARNKRSRAPLKRLKLS 2150
Score = 52 (23.4 bits), Expect = 2.4e-259, Sum P(4) = 2.4e-259
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVK 1136
WI + G+NL+PP R R V+
Sbjct: 872 WIADAGINLQPPVRTSRRKAVR 893
Score = 50 (22.7 bits), Expect = 2.4e-259, Sum P(4) = 2.4e-259
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 1669 TLVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAESG 1707
T E+D++ +++ + +N FD + T K E+G
Sbjct: 2058 TKKENDNDSQTKRTESDAALKNTFDSSEENSTNHKVENG 2096
Score = 49 (22.3 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 284 ETKTKAEKFLMSAMETERLTRLDQELMLLIIKYLEKGPCHEAAKVLTDLVE-AKNLLPER 342
E A KF++S E E + D+ + P +A KVL+DL + A++ +R
Sbjct: 1804 EQSMSANKFVVSNSEDEACSESDRWNARKLFGLHLVAPIKKA-KVLSDLEDTAESETEDR 1862
Query: 343 YDWEGATHSQTLAEVA-SSHPN 363
D S+TL ++ PN
Sbjct: 1863 QDGRSVV-SETLVPCRITASPN 1883
Score = 43 (20.2 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 254 TLVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAE 290
T E+D++ +++ + +N FD + T K E
Sbjct: 2058 TKKENDNDSQTKRTESDAALKNTFDSSEENSTNHKVE 2094
Score = 42 (19.8 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 423 QHGTSL----LVPNSVKVHNTVNVLRSREYSGPLS-RSLMISSHKYSNLRQHYVNLGHLS 477
QH T + L +K + + +S P S R+ ++SHK + ++ + G S
Sbjct: 1455 QHPTKMPSRNLKQKPLKSQAKIESEQEDSFSQPTSSRAACVASHKTNASNYNHSSSGESS 1514
Query: 478 AVFCVL-FDKLGE 489
C+ F++ G+
Sbjct: 1515 DSACLASFERNGK 1527
Score = 41 (19.5 bits), Expect = 2.3e-104, Sum P(4) = 2.3e-104
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 948 EGQRHYNDHGHVYIQTSHV---HVLR 970
EG HY + + + HV H+L+
Sbjct: 58 EGNEHYRSYEELVLSNKHVAPDHLLQ 83
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 1369 (487.0 bits), Expect = 2.2e-258, Sum P(4) = 2.2e-258
Identities = 305/696 (43%), Positives = 408/696 (58%)
Query: 298 ETERLTRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEV 357
E + L+ L EL LI ++LE GPC +AA+VL V K LLP R DW G H +T +
Sbjct: 4 ERKGLSELRSELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTDWTGKEHPRTYQNL 63
Query: 358 ASSHPNVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSY 417
+ ++ L +IC RLGPLL++E+ + P KS K V+
Sbjct: 64 VKYYRHLAPDHLLQICHRLGPLLEQEIPQSVPGVQTLLGAGRQSLLRTNKS-CKHVVWKG 122
Query: 418 DYIARQH-GTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGH 475
+A H G P N + + L SR+ +G ++ + Y +++ H LGH
Sbjct: 123 SALAALHCGRPPESPVNYGSPPSIADTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGH 182
Query: 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAA 535
LS+V+CV FD+ G I TG+DD L+K+W DG+LLATLRG + EISD+A++ N ++AA
Sbjct: 183 LSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAA 242
Query: 536 GTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595
G+ DK IR+W L+T AP++VL GH IT + F PL YL+ST DG I FW +
Sbjct: 243 GSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLW-- 300
Query: 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLG 655
D K + P F ER RPG ++CSSFS GG+FLATGS DH +RVY G P
Sbjct: 301 DAGTLK-INPRPTKFTERPRPG-VQMICSSFSAGGMFLATGSTDHIIRVYFF-GSGQPEK 357
Query: 656 ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETS 715
I E+E H+DKVDSIQ+S++ RFVSGSRDGTA IW +K +W+ I LDM T P +
Sbjct: 358 ISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFKRREWKSILLDMAT-RPAGQNLQ 416
Query: 716 DETNK--KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESH 773
+K K+KVTMVAWD D VITA+N N +K+W+++ G L+ VL GH +EVFVLE H
Sbjct: 417 GIEDKITKMKVTMVAWDRHDNTVITAVN-NMTLKVWNSYTGQLIHVLMGHEDEVFVLEPH 475
Query: 774 PFDSRVLLSAGHDGLIIIWDILSS-KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALT 832
PFD RVL SAGHDG +I+WD+ K R Y F N++EGQG GA+FD K SPDG A T
Sbjct: 476 PFDPRVLFSAGHDGNVIVWDLARGVKVRSY--F-NMIEGQGHGAVFDCKCSPDGQHFACT 532
Query: 833 DSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFL 892
DS+GHLL++G G + I ++FFH+DYR L R F DE T PHLMPPPFL
Sbjct: 533 DSHGHLLIFGFGSSSKYDKIADQMFFHSDYRPLIRDANNF--VLDEQTQQAPHLMPPPFL 590
Query: 893 VDLNGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRH 952
VD++G P+P QRLVPGREN + +L+P + G +++ P++ QR
Sbjct: 591 VDVDGNPHPSRYQRLVPGRENCREEQLIPQMGVTSSGLNQVLSQQANQDISPLDSMIQRL 650
Query: 953 YNDHGHVYIQTSHVHVLR-SRAN-GESSAATEGTSP 986
+ ++ V SR N G S+ +E SP
Sbjct: 651 QQEQD--LRRSGEAGVSNASRVNRGSVSSTSEVHSP 684
Score = 1067 (380.7 bits), Expect = 2.2e-258, Sum P(4) = 2.2e-258
Identities = 220/536 (41%), Positives = 311/536 (58%)
Query: 1125 PPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFF 1182
P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV +F
Sbjct: 912 PKKKKPKERKQKRLAVGELTENGLTLEE----WLPSAWITDTLPRRCPFVPQMGDEVYYF 967
Query: 1183 KQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVM 1242
+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA +
Sbjct: 968 RQGHEAYVEMARKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFL 1026
Query: 1243 KPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIE 1301
P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAWW+GTIE
Sbjct: 1027 DPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRPWNIGDRFRSVIDDAWWFGTIE 1086
Query: 1302 GK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEIQE 1356
+ P S F Y + WDN + E +SPWD+E P E G S+P+ E +
Sbjct: 1087 SQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDVECRS 1146
Query: 1357 LLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDL 1416
L+Y P EW RD CE+I+ G+ ++M L +A F+ PVD+ DL
Sbjct: 1147 LIYKPLDGEWGANPRDEECERIVGGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPTDL 1206
Query: 1417 TTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPV 1476
+T++ R +NRFYRR +S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 1207 STIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCY 1266
Query: 1477 DVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNE 1536
++ +Y+ + + R R R R N+ + WK +
Sbjct: 1267 NIIPLYNSMKKKVLSDSEEEEKDADVPGTSTRKRKDHQPR--RRLRNRAQSYDIQAWKKQ 1324
Query: 1537 CREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKD 1596
C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYESP++ KD
Sbjct: 1325 CQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKD 1384
Query: 1597 VKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNS----HK-NKENKK 1647
V+ +F N + Y +KRS+IY M+ RLS F EEH+ + + S HK N +KK
Sbjct: 1385 VRLIFSNFKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTISKK 1440
Score = 433 (157.5 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 93/237 (39%), Positives = 134/237 (56%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L+T++ R +NRFYRR +S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 1206 LSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTC 1265
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
++ +Y+ + + R R R R N+ + WK
Sbjct: 1266 YNIIPLYNSMKKKVLSDSEEEEKDADVPGTSTRKRKDHQPR--RRLRNRAQSYDIQAWKK 1323
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK 180
+C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYESP++ K
Sbjct: 1324 QCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCK 1383
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNS----HK-NKENKK 232
DV+ +F N + Y +KRS+IY M+ RLS F EEH+ + + S HK N +KK
Sbjct: 1384 DVRLIFSNFKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTISKK 1440
Score = 63 (27.2 bits), Expect = 2.2e-258, Sum P(4) = 2.2e-258
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVKP 1137
W + G+NL+PPK+V +H KP
Sbjct: 855 WTADAGINLQPPKKVPKHKTKKP 877
Score = 61 (26.5 bits), Expect = 3.4e-149, Sum P(3) = 3.4e-149
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 1532 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPI 1591
N+ +E V E L + S RKP K+ + D +I P ++ +R R + PI
Sbjct: 1693 NFLSETNAVKEDL-LQKKSRGGRKPKRKMKTHNLDSELIVPTNVKVLRRSNRKKT-DDPI 1750
Query: 1592 DF---VKDVKRVFHNSRNYNQNKRSKIY 1616
D +++K + R NQ +R+ Y
Sbjct: 1751 DEEEEFEELKGSEPHMRTRNQGRRTAFY 1778
Score = 44 (20.5 bits), Expect = 2.4e-142, Sum P(2) = 2.4e-142
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
EE+ +E EN +D E A + R S+ S D +S+ S+ D
Sbjct: 803 EETPRPLEELENGTSSSDEGEVLAVSGGTSEEEERAWHSDGSSSDYSSDYSDWTAD 858
Score = 42 (19.8 bits), Expect = 2.2e-258, Sum P(4) = 2.2e-258
Identities = 23/94 (24%), Positives = 36/94 (38%)
Query: 1781 ESASESQEDENSIP-ETDTTEQPAKK--LKVLYPKRR-----GQQSEDGSGDNASEMSEL 1832
ES+S + N + + TEQP+ K K G+ + S ++ +S L
Sbjct: 1499 ESSSVVRTRSNRVAVDPVVTEQPSTSSATKAFVSKTNTSAMPGKAMLENSVRHSKALSTL 1558
Query: 1833 KQ-DPLSLHXXXXXXXXXXXMGKRKRTTRLVKSN 1865
DPL+ M K K R +KS+
Sbjct: 1559 SSPDPLTFSHATKNNSAKENMEKEKPVKRKMKSS 1592
>UNIPROTKB|F1MTQ0 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS
GeneTree:ENSGT00700000104382 EMBL:DAAA02003179 IPI:IPI00685238
Ensembl:ENSBTAT00000018087 Uniprot:F1MTQ0
Length = 2322
Score = 1412 (502.1 bits), Expect = 2.3e-258, Sum P(4) = 2.3e-258
Identities = 290/648 (44%), Positives = 403/648 (62%)
Query: 305 LDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNV 364
++ EL LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V
Sbjct: 14 IESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHV 73
Query: 365 TASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH 424
L +ICQR+GP+LDKE+ P+ K +V + A
Sbjct: 74 APDHLLQICQRIGPMLDKEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHR 133
Query: 425 GTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVL 483
G +P N N V + R ++ +G + S Y +++ H LGHLSAV+CV
Sbjct: 134 GRPPEMPVNYGSPPNLVEIHRGKQLTGCSTFSTAFPGAMYQHIKMHRRILGHLSAVYCVA 193
Query: 484 FDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIR 543
FD+ G I TG+DD L+K+W +G+LL+TLRG S EISD+A++ N ++AAG+ DK IR
Sbjct: 194 FDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIR 253
Query: 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+W L+T AP++VL GH G IT + F P+ Y+ ST DG + FW++ L+ S
Sbjct: 254 VWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLE---SLKF 310
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663
P+ F E+ RPG +LCSSFS GG+FLATGS DH +R+Y + G ++P I E+E H+
Sbjct: 311 SPRPLKFTEKPRPG-VQMLCSSFSVGGMFLATGSTDHVIRMYFL-GFEAPEKIAELESHT 368
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723
DKVDSIQ+ ++ RF+SGSRDGTA IW ++ +WR I LDM T + +E K K
Sbjct: 369 DKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSLEEERFMKPK 428
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
VTM+AW+ +D V+TA+N + +K+W+++ G L+ L GH +EVFVLE+HPFDSR++LSA
Sbjct: 429 VTMIAWNQNDSIVVTAVN-DHVLKVWNSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSA 487
Query: 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
GHDG I IWDI +K K + N++EGQG GA+FD K+S DG A TDS+GHLL++G
Sbjct: 488 GHDGSIFIWDI--TKGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGF 545
Query: 844 GGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPE 903
G K + IP ++FFHTDYR L R + + DE T PHLMPPPFLVD++G P+P +
Sbjct: 546 GCSKPYEKIPDQMFFHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTK 603
Query: 904 VQRLVPGRENADDTELLPDI--TTNDDGHV--EIVE-GSERNGERPVE 946
QRLVPGREN+ D L+P + DG V +I+ + NGER E
Sbjct: 604 YQRLVPGRENSADEHLVPQLGYVATSDGEVIEQIISLQTNDNGERSPE 651
Score = 1091 (389.1 bits), Expect = 2.3e-258, Sum P(4) = 2.3e-258
Identities = 219/525 (41%), Positives = 320/525 (60%)
Query: 1122 NLEPPKRVRRHTKV-KPIQVSLPKQLIPE--EVPDIYK--PSDWLAEVVPKKAPYYPQMG 1176
NL PPKR R+ K KP + +L + E +V +Y+ P W+ + +K+P+ PQMG
Sbjct: 903 NLSPPKRRRKRKKENKPKKENLRRMTQAELADVEHLYEFHPPVWITDTTLRKSPFVPQMG 962
Query: 1177 DEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCC 1236
DEV++F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VGI+YE+ PP +CC
Sbjct: 963 DEVIYFRQGHEAYIEAVRRNNIYELNP-NKEPWRKMDLRDQELVKIVGIRYEVGPPTLCC 1021
Query: 1237 LKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAW 1295
LKLA + P GKL ++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDAW
Sbjct: 1022 LKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIIDDAW 1081
Query: 1296 WWGTI-EGKPSPTKSP---FLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVE 1350
W+GT+ +P + P F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1082 WFGTVLRQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISVT 1141
Query: 1351 PEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXX 1410
+E+++LLY P+ EW Q RD CE+II+G+++++ L +A F PVD+
Sbjct: 1142 SDELEKLLYKPQDGEWGQKSRDEECERIISGIDQLLNLDIAAAFAGPVDLCTYPKYCTVV 1201
Query: 1411 XXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRII 1470
DL T+R R NRFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+ I
Sbjct: 1202 AYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLKFI 1261
Query: 1471 KEPNPVDVPVVYHELLQNYXXXXXXXXXXX-XXXXRQRRVRPTAVTRAQREAMNQKKLKR 1529
K + +++ + + + +RRV +R ++
Sbjct: 1262 KNQDCINISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDWK----KRSIKTTNYVEN 1317
Query: 1530 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYES 1589
NWK +C+E++ ++ C DSEPFR+PVD +++PDY I+ PMD GT+RE L NY+S
Sbjct: 1318 --NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLEAGNYDS 1375
Query: 1590 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 1634
P++F KD++ +F N++ Y NKRSKIY MT RLS EE +++++
Sbjct: 1376 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1420
Score = 413 (150.4 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 84/220 (38%), Positives = 130/220 (59%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+R R NRFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+ IK +
Sbjct: 1207 LYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLKFIKNQDC 1266
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXX-XXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWK 119
+++ + + + +RRV +R ++ NWK
Sbjct: 1267 INISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDWK----KRSIKTTNYVEN--NWK 1320
Query: 120 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFV 179
+C+E++ ++ C DSEPFR+PVD +++PDY I+ PMD GT+RE L NY+SP++F
Sbjct: 1321 KQCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLEAGNYDSPLEFC 1380
Query: 180 KDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 219
KD++ +F N++ Y NKRSKIY MT RLS EE +++++
Sbjct: 1381 KDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1420
Score = 42 (19.8 bits), Expect = 2.3e-258, Sum P(4) = 2.3e-258
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEM 1829
+ ED+ S+ E+ +L L Q +E+G ++ S++
Sbjct: 1679 NSEDDQSLKSELEEEELKDQLSPLSNSLAAQNTENGDSESESDL 1722
Score = 41 (19.5 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 704 MNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 763
M TC+ + K+ ++ +K MV R A N +IKI +L + + G
Sbjct: 2205 MRTCVHNQKDAVPMPSETLKAKMVPEKVPRRCATVAAN---KIKIMS----NLKETISGP 2257
Query: 764 TNEVFVLES 772
N V++ +S
Sbjct: 2258 EN-VWIRKS 2265
Score = 38 (18.4 bits), Expect = 6.0e-258, Sum P(4) = 6.0e-258
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLK 1807
E A+ SQ + + ETD KK K
Sbjct: 1850 EPAARSQCFSDHVSETDLDSDDDKKAK 1876
Score = 38 (18.4 bits), Expect = 2.0e-145, Sum P(3) = 2.0e-145
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 946 EVEGQRHYNDHGHVYIQTSHVHVLRSRANG----ESSAATEGTSPSGTAPTAQNKN--FV 999
E + + H +D+GH +L+ +A E A +E S + KN F+
Sbjct: 1753 EEDSKSHDSDNGHSRTAGPSTSLLKLKAESISEEEEKANSETRKYSSRKYSTGRKNAPFL 1812
Query: 1000 KRLPL 1004
K+ L
Sbjct: 1813 KKAKL 1817
Score = 37 (18.1 bits), Expect = 2.3e-258, Sum P(4) = 2.3e-258
Identities = 12/54 (22%), Positives = 22/54 (40%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKK 1168
W + G++L+PP R ++ S ++ E + + E PKK
Sbjct: 868 WTADAGIHLQPPLRTSSRRRITRFCSSSEDEMSAENLSPPKRRRKRKKENKPKK 921
>MGI|MGI:1890651 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:1890651 GO:GO:0005634 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 CTD:54014 HOVERGEN:HBG080933 KO:K11798
ChiTaRS:BRWD1 EMBL:AJ292467 EMBL:AJ292468 EMBL:AC144797
EMBL:AC152502 IPI:IPI00121655 IPI:IPI01007673 RefSeq:NP_001096649.1
RefSeq:NP_660107.2 UniGene:Mm.240871 UniGene:Mm.482469
ProteinModelPortal:Q921C3 SMR:Q921C3 IntAct:Q921C3
PhosphoSite:Q921C3 PRIDE:Q921C3 Ensembl:ENSMUST00000023631
Ensembl:ENSMUST00000099502 Ensembl:ENSMUST00000113829 GeneID:93871
KEGG:mmu:93871 UCSC:uc008aci.2 UCSC:uc008ack.2
GeneTree:ENSGT00700000104382 HOGENOM:HOG000095265 InParanoid:Q921C3
NextBio:351749 Bgee:Q921C3 CleanEx:MM_BRWD1 Genevestigator:Q921C3
GermOnline:ENSMUSG00000022914 Uniprot:Q921C3
Length = 2304
Score = 1401 (498.2 bits), Expect = 1.1e-257, Sum P(5) = 1.1e-257
Identities = 286/634 (45%), Positives = 396/634 (62%)
Query: 305 LDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNV 364
++ EL LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V
Sbjct: 14 IESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHV 73
Query: 365 TASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH 424
L +ICQR+GP+LDKE+ P+ K +V + A
Sbjct: 74 APDHLLQICQRIGPMLDKEVPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHR 133
Query: 425 GTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVL 483
G +P N + V + R R+ +G + S Y +++ H LGHLSAV+CV
Sbjct: 134 GRPPEMPVNYGPPPSLVEIHRGRQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVA 193
Query: 484 FDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIR 543
FD+ G I TG+DD L+K+W +G+LL+TLRG S EISD+A++ N L+AAG+ DK IR
Sbjct: 194 FDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIR 253
Query: 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+W L+T AP++VL GH G IT + F P+ Y+ ST DG + FW++ L+ S
Sbjct: 254 VWCLRTCAPVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLE---SLKF 310
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663
P+ F E+ RPG +LCSSFS GG+FLATGS DH +R+Y + G D+P I E+E H+
Sbjct: 311 SPRPLKFTEKPRPG-VQMLCSSFSVGGMFLATGSTDHVIRMYFL-GFDAPEKIAELESHT 368
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723
DKVDSIQ+ ++ RF+SGSRDGTA IW ++ +WR I LDM+ + + +E K K
Sbjct: 369 DKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMSARISGDTSSEEERFMKPK 428
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
VTM+AW+ D V+TA+N + +K+W ++ G L+ L GH +EVFVLE+HPFDSR++LSA
Sbjct: 429 VTMIAWNQDDSTVVTAVN-DHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSA 487
Query: 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
GHDG I IWDI +K K + N++EGQG GA+FD K+S DG A TDS+GHLL++G
Sbjct: 488 GHDGSIFIWDI--TKGIKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGF 545
Query: 844 GGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPE 903
G K + IP ++FFHTDYR L R + + DE T PHLMPPPFLVD++G P+P +
Sbjct: 546 GCSKPYEKIPDQMFFHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTK 603
Query: 904 VQRLVPGRENADDTELLPDI--TTNDDGHVEIVE 935
QRLVPGREN+ D L+P + DG E++E
Sbjct: 604 FQRLVPGRENSADEHLVPQLGYVATSDG--EVIE 635
Score = 1079 (384.9 bits), Expect = 1.1e-257, Sum P(5) = 1.1e-257
Identities = 221/546 (40%), Positives = 325/546 (59%)
Query: 1122 NLEPPKRVRRHTKV-KPIQVSLPKQLIPEEVPDI-----YKPSDWLAEVVPKKAPYYPQM 1175
N+ PPKR R+ K KP + SL +++ P E+ ++ + P W+ + +K+P+ PQM
Sbjct: 904 NISPPKRRRKRRKESKPKRESL-RRMTPAELANMEHLYEFHPPVWITDTTLRKSPFVPQM 962
Query: 1176 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 1235
GDEVM+F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VG++YE+ PP +C
Sbjct: 963 GDEVMYFRQGHEAYIEAVRRNNIYELNP-HKEPWRKMDLRDQELVKIVGLRYEVGPPTLC 1021
Query: 1236 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1294
CLKLA + P G+LT++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDA
Sbjct: 1022 CLKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQPCDRFRSIIDDA 1081
Query: 1295 WWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPV 1349
WW+GT+ + P S F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1082 WWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTETEKLSPWDMEPIPDNVDPPEELGASISV 1141
Query: 1350 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXX 1409
+E+++LLY P+ EW Q RD C++II+G+++++ L +A F PVD+
Sbjct: 1142 TSDELEKLLYKPQEGEWGQRSRDEECDRIISGIDQLLNLDIAAAFAGPVDLCTYPKYCTV 1201
Query: 1410 XXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRI 1469
DL T+R R NRFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+
Sbjct: 1202 VAYPTDLYTIRMRLVNRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITDQLLKF 1261
Query: 1470 IKEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKR 1529
IK + ++ EL + + +R+ N K+ R
Sbjct: 1262 IKNQDCTNIS----ELCNTSDNDEDDSADDLDDSDLPK------TSSGRRKVHNWKRRSR 1311
Query: 1530 PF-----NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRG 1584
+W+ +C+ +L ++ C DSEPFR+PVD ++PDY I+ PMD GT+RE L
Sbjct: 1312 ASGCIESDWRRQCKALLILIFQCEDSEPFRQPVDLDEYPDYRDIIDTPMDFGTVRETLEA 1371
Query: 1585 DNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWN-SHKNK 1643
NY+SP++F KD++ +F N++ Y NKRSKIY MT RLS EE +++++ + K K
Sbjct: 1372 GNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISFDFKIGQKFK 1431
Query: 1644 ENKKDS 1649
E + S
Sbjct: 1432 EKLRRS 1437
Score = 394 (143.8 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 88/240 (36%), Positives = 133/240 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+R R NRFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+ IK +
Sbjct: 1208 LYTIRMRLVNRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITDQLLKFIKNQDC 1267
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPF---- 116
++ EL + + +R+ N K+ R
Sbjct: 1268 TNIS----ELCNTSDNDEDDSADDLDDSDLPK------TSSGRRKVHNWKRRSRASGCIE 1317
Query: 117 -NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESP 175
+W+ +C+ +L ++ C DSEPFR+PVD ++PDY I+ PMD GT+RE L NY+SP
Sbjct: 1318 SDWRRQCKALLILIFQCEDSEPFRQPVDLDEYPDYRDIIDTPMDFGTVRETLEAGNYDSP 1377
Query: 176 IDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWN-SHKNKENKKDS 234
++F KD++ +F N++ Y NKRSKIY MT RLS EE +++++ + K KE + S
Sbjct: 1378 VEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISFDFKIGQKFKEKLRRS 1437
Score = 41 (19.5 bits), Expect = 1.1e-257, Sum P(5) = 1.1e-257
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 1116 WIHE-GVNLEPPKRV---RRHTK 1134
W + G+NL+PP R+ RR T+
Sbjct: 869 WTADTGINLQPPLRMSCRRRVTR 891
Score = 38 (18.4 bits), Expect = 1.1e-257, Sum P(5) = 1.1e-257
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLSL 1839
E+S+SES +P + + KKL L+ S+D S SE ELK SL
Sbjct: 1652 EDSSSESPCSGRKLPHRNASAVARKKL--LH------NSDDQS--LKSETEELKDQNQSL 1701
Score = 38 (18.4 bits), Expect = 6.4e-146, Sum P(4) = 6.4e-146
Identities = 12/41 (29%), Positives = 14/41 (34%)
Query: 1288 CSMIDDAWWWGTIEGKPSPTKSPFLGYKILWDNNERENLSP 1328
CS DD W G S + S W + NL P
Sbjct: 839 CSSEDDEWRNDRRSGSDSDSSSDSSSQYSDWTADTGINLQP 879
Score = 38 (18.4 bits), Expect = 3.6e-144, Sum P(3) = 3.6e-144
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 1787 QEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNAS 1827
Q+ + + + + ++ ++ Y +R Q E SG+ +S
Sbjct: 783 QKSNSMVLVSQSRQRTCRRKYANYSRRNADQCELSSGNESS 823
Score = 37 (18.1 bits), Expect = 1.1e-257, Sum P(5) = 1.1e-257
Identities = 14/48 (29%), Positives = 18/48 (37%)
Query: 896 NGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGER 943
NG P R R + D + P+I G VE V +N R
Sbjct: 679 NGLPSGEGTPRRGSFRRLSLDIQSPPNIGLRRSGQVEGVRQMHQNAPR 726
>UNIPROTKB|Q9NSI6 [details] [associations]
symbol:BRWD1 "Bromodomain and WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AJ238214 EMBL:AJ292465 EMBL:AJ292466
EMBL:AB080586 EMBL:AB080587 EMBL:AF064861 EMBL:AF129408
EMBL:BC064602 EMBL:AL163279 EMBL:AJ222636 EMBL:AK002177
IPI:IPI00250716 IPI:IPI00289944 IPI:IPI00746752
RefSeq:NP_001007247.1 RefSeq:NP_061836.2 RefSeq:NP_387505.1
UniGene:Hs.627139 UniGene:Hs.654740 PDB:3Q2E PDBsum:3Q2E
ProteinModelPortal:Q9NSI6 SMR:Q9NSI6 IntAct:Q9NSI6 STRING:Q9NSI6
DMDM:97535778 PaxDb:Q9NSI6 PRIDE:Q9NSI6 Ensembl:ENST00000333229
Ensembl:ENST00000341322 Ensembl:ENST00000342449
Ensembl:ENST00000380800 GeneID:54014 KEGG:hsa:54014 UCSC:uc002yxk.2
UCSC:uc021wjf.1 CTD:54014 GeneCards:GC21M040556 HGNC:HGNC:12760
HPA:HPA030945 neXtProt:NX_Q9NSI6 PharmGKB:PA134906879
HOVERGEN:HBG080933 InParanoid:Q9NSI6 KO:K11798 OMA:NDNGERS
OrthoDB:EOG470TGD PhylomeDB:Q9NSI6 ChiTaRS:BRWD1
EvolutionaryTrace:Q9NSI6 GenomeRNAi:54014 NextBio:56274
ArrayExpress:Q9NSI6 Bgee:Q9NSI6 CleanEx:HS_BRWD1
Genevestigator:Q9NSI6 GermOnline:ENSG00000185658 Uniprot:Q9NSI6
Length = 2320
Score = 1409 (501.1 bits), Expect = 2.6e-257, Sum P(4) = 2.6e-257
Identities = 289/648 (44%), Positives = 403/648 (62%)
Query: 305 LDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNV 364
++ EL LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V
Sbjct: 14 IESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHV 73
Query: 365 TASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH 424
L +ICQR+GP+LDKE+ P+ K +V + A
Sbjct: 74 APDHLLQICQRIGPMLDKEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHR 133
Query: 425 GTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVL 483
G +P N N V + R ++ +G + S Y +++ H LGHLSAV+CV
Sbjct: 134 GRPPEMPVNYGSPPNLVEIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVA 193
Query: 484 FDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIR 543
FD+ G I TG+DD L+K+W +G+LL+TLRG S EISD+A++ N ++AAG+ DK IR
Sbjct: 194 FDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIR 253
Query: 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+W L+T AP++VL GH G IT + F P+ Y+ ST DG + FW++ L+ S
Sbjct: 254 VWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLE---SLKF 310
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663
P+ F E+ RPG +LCSSFS GG+FLATGS DH +R+Y + G ++P I E+E H+
Sbjct: 311 SPRPLKFTEKPRPG-VQMLCSSFSVGGMFLATGSTDHVIRMYFL-GFEAPEKIAELESHT 368
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723
DKVDSIQ+ ++ RF+SGSRDGTA IW ++ +WR I LDM T + + +E K K
Sbjct: 369 DKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSSEEERFMKPK 428
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
VTM+AW+ +D V+TA+N + +K+W+++ G L+ L GH +EVFVLE+HPFDSR++LSA
Sbjct: 429 VTMIAWNQNDSIVVTAVN-DHVLKVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSA 487
Query: 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
GHDG I IWDI +K K + N++EGQG GA+FD K+S DG A TDS+GHLL++G
Sbjct: 488 GHDGSIFIWDI--TKGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGF 545
Query: 844 GGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPE 903
G K + IP ++FFHTDYR L R + + DE T PHLMPPPFLVD++G P+P +
Sbjct: 546 GCSKPYEKIPDQMFFHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTK 603
Query: 904 VQRLVPGRENADDTELLPDI--TTNDDGHV--EIVE-GSERNGERPVE 946
QRLVPGREN+ D L+P + DG V +I+ + N ER E
Sbjct: 604 YQRLVPGRENSADEHLIPQLGYVATSDGEVIEQIISLQTNDNDERSPE 651
Score = 1085 (387.0 bits), Expect = 2.6e-257, Sum P(4) = 2.6e-257
Identities = 219/525 (41%), Positives = 321/525 (61%)
Query: 1122 NLEPPKRVRRHTKV-KPIQVSLPKQLIPEEVPDI-----YKPSDWLAEVVPKKAPYYPQM 1175
NL PPKR R+ K KP + +L +++ P E+ ++ + P W+ + +K+P+ PQM
Sbjct: 903 NLSPPKRRRKRKKENKPKKENL-RRMTPAELANMEHLYEFHPPVWITDTTLRKSPFVPQM 961
Query: 1176 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 1235
GDEV++F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VGI+YE+ PP +C
Sbjct: 962 GDEVIYFRQGHEAYIEAVRRNNIYELNP-NKEPWRKMDLRDQELVKIVGIRYEVGPPTLC 1020
Query: 1236 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1294
CLKLA + P GKL ++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDA
Sbjct: 1021 CLKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIIDDA 1080
Query: 1295 WWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPV 1349
WW+GT+ + P S F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1081 WWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISV 1140
Query: 1350 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXX 1409
+E+++LLY P+ EW Q RD C++II+G+++++ L +A F PVD+
Sbjct: 1141 TTDELEKLLYKPQAGEWGQKSRDEECDRIISGIDQLLNLDIAAAFAGPVDLCTYPKYCTV 1200
Query: 1410 XXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRI 1469
DL T+R R NRFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+
Sbjct: 1201 VAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLKF 1260
Query: 1470 IKEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKR 1529
IK + ++ + + + RR R ++ R A N +
Sbjct: 1261 IKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRR-RVHDGKKSIR-ATNYVES-- 1316
Query: 1530 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYES 1589
NWK +C+E++ ++ C DSEPFR+PVD +++PDY I+ PMD GT+RE L NY+S
Sbjct: 1317 --NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDS 1374
Query: 1590 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 1634
P++F KD++ +F N++ Y NKRSKIY MT RLS EE +++++
Sbjct: 1375 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1419
Score = 408 (148.7 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 86/219 (39%), Positives = 130/219 (59%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+R R NRFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+ IK +
Sbjct: 1207 LYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLKFIKNQHC 1266
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
++ + + + RR R ++ R A N + NWK
Sbjct: 1267 TNISELSNTSENDEQNAEDLDDSDLPKTSSGRR-RVHDGKKSIR-ATNYVES----NWKK 1320
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK 180
+C+E++ ++ C DSEPFR+PVD +++PDY I+ PMD GT+RE L NY+SP++F K
Sbjct: 1321 QCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCK 1380
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 219
D++ +F N++ Y NKRSKIY MT RLS EE +++++
Sbjct: 1381 DIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1419
Score = 46 (21.3 bits), Expect = 1.3e-144, Sum P(2) = 1.3e-144
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 1122 NLEPPKRVRRHTKVKPIQVSLPKQ 1145
NL+P KR++ TK+ P V P Q
Sbjct: 1456 NLKP-KRLKSQTKIIPELVGSPTQ 1478
Score = 42 (19.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 37/168 (22%), Positives = 61/168 (36%)
Query: 846 FKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPP--FLVDLNGTPYPPE 903
FK Q +L ++ G +P + NL P + + +L G+P
Sbjct: 1422 FKIGQKFNEKLRRSQRFKQRQNCKGDSQPN-KSIRNLKPKRLKSQTKIIPELVGSPTQST 1480
Query: 904 VQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGE-RPVEVEGQRHYNDHGHVYIQ 962
R + + +T+ D + E SER RP+ G +
Sbjct: 1481 SSRTAYLGTHKTSAGISSGVTSGDSS--DSAESSERRKRNRPI-TNGSTLSESEVEDSLA 1537
Query: 963 TSHVHVLRSRA--NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHK 1008
TS S + + ESS A E +S SG + ++ + V R +Q K
Sbjct: 1538 TSLSSSASSSSEESKESSRARESSSRSGLSRSSNLR--VTRTRAAQRK 1583
Score = 40 (19.1 bits), Expect = 2.6e-257, Sum P(4) = 2.6e-257
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 1116 WIHE-GVNLEPPKRV---RRHTK 1134
W + G+NL+PP R RR T+
Sbjct: 868 WTADAGINLQPPLRTSCRRRITR 890
Score = 39 (18.8 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 704 MNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 763
+ TC+ + K+ ++ +K MV R A N +IKI +L + + G
Sbjct: 2203 VRTCMHNQKDAVQMPSETLKAKMVPEKVPRRCATVAAN---KIKIMS----NLKETISGP 2255
Query: 764 TNEVFVLES 772
N V++ +S
Sbjct: 2256 EN-VWIRKS 2263
Score = 38 (18.4 bits), Expect = 2.6e-257, Sum P(4) = 2.6e-257
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 1801 QPAKKLKVLYPKRRGQQSE 1819
QP K ++ L PKR Q++
Sbjct: 1449 QPNKSIRNLKPKRLKSQTK 1467
>RGD|1309030 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0007010 "cytoskeleton organization" evidence=IEA;ISO]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 RGD:1309030 GO:GO:0005737 GO:GO:0007010 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS OrthoDB:EOG470TGD
GeneTree:ENSGT00700000104382 EMBL:AC112406 IPI:IPI00762963
Ensembl:ENSRNOT00000002231 UCSC:RGD:1309030 ArrayExpress:D4AAI9
Uniprot:D4AAI9
Length = 2303
Score = 1386 (493.0 bits), Expect = 1.3e-256, Sum P(5) = 1.3e-256
Identities = 283/634 (44%), Positives = 394/634 (62%)
Query: 305 LDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNV 364
++ EL LI +YL GPC AA+VL +E LLP+R DWEG H+++ E+ S+ +V
Sbjct: 14 IESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHV 73
Query: 365 TASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH 424
L +ICQR+GP+LDKE P+ K +V + A
Sbjct: 74 APDHLLQICQRIGPMLDKEAPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHR 133
Query: 425 GTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVL 483
G +P N + V++ R ++ +G + S Y +++ H LGHLSAV+CV
Sbjct: 134 GRPPEMPVNYGPPPSLVDIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVA 193
Query: 484 FDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIR 543
FD+ G I TG+DD L+K+W +G+LL+TLRG S EISD+A++ N L+AAG+ DK IR
Sbjct: 194 FDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIR 253
Query: 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+W L+T AP++VL GH G IT + F P+ Y+ ST DG + FW++ L+ S
Sbjct: 254 VWCLRTCAPVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLE---SLKF 310
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663
P+ F E+ RPG +LCSSFS GG+FLATGS DH +R+Y + G ++P I E+E H+
Sbjct: 311 SPRPLKFTEKPRPG-VQMLCSSFSVGGMFLATGSTDHVIRMYFL-GFEAPEKIAELESHT 368
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723
DKVDSIQ+ ++ RF+SGSRDGTA IW ++ +W+ I LDM + +E K K
Sbjct: 369 DKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWKSILLDMAARISGDTSAEEERFMKPK 428
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
VTM+AW+ D V+TA+N + +K+W ++ G L+ L GH +EVFVLE+HPFDSR++LSA
Sbjct: 429 VTMIAWNQDDSTVVTAVN-DHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSA 487
Query: 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
GHDG I IWDI +K K + N++EGQG GA+FD K+S DG A TDS+GHLL++G
Sbjct: 488 GHDGSIFIWDI--TKGIKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGF 545
Query: 844 GGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPE 903
G K + IP ++FFHTDYR L R + + DE T PHLMPPPFLVD++G P+P +
Sbjct: 546 GCSKPYEKIPDQMFFHTDYRPLIRDSNNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTK 603
Query: 904 VQRLVPGRENADDTELLPDI--TTNDDGHVEIVE 935
QRLVPGREN+ D L+P + DG E++E
Sbjct: 604 FQRLVPGRENSADEHLVPQLGYVATSDG--EVIE 635
Score = 1085 (387.0 bits), Expect = 1.3e-256, Sum P(5) = 1.3e-256
Identities = 219/541 (40%), Positives = 325/541 (60%)
Query: 1122 NLEPPKRVRRHTKV-KPIQVSLPKQLIPEEVPDI-----YKPSDWLAEVVPKKAPYYPQM 1175
N+ PPKR R+ K KP + SL ++ P E+ ++ + P W+ + +K+P+ PQM
Sbjct: 904 NISPPKRRRKRRKESKPKRESL-RRTTPAELANMEPLYEFHPPVWITDTTLRKSPFVPQM 962
Query: 1176 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 1235
GDEVM+F+QG++ Y++AVR IYEL+ PW + L++ ELVK+VG++YE+ PP +C
Sbjct: 963 GDEVMYFRQGHEAYIEAVRRNNIYELNP-NKEPWRKMDLRDQELVKIVGLRYEVGPPTLC 1021
Query: 1236 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1294
CLKLA + P G+LT++ F+I+YHDMPDVIDF VLRQ Y+ A R W DRF S+IDDA
Sbjct: 1022 CLKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQPSDRFRSIIDDA 1081
Query: 1295 WWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPV 1349
WW+GT+ + P S F Y + WDN E E LSPWD+EP P E G S+ V
Sbjct: 1082 WWFGTVLSQEPYQPQYPDSHFQCYSVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISV 1141
Query: 1350 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXX 1409
+E+++LLY P+ EW Q RD CE+II+G+++++ L +A F PVD+
Sbjct: 1142 TSDELEKLLYKPQDGEWGQRSRDEECERIISGIDQLLNLDIAAAFAGPVDLCTYPKYCTV 1201
Query: 1410 XXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRI 1469
DL T+R R +RFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+
Sbjct: 1202 VAYPTDLYTIRMRLVHRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITDQLLKF 1261
Query: 1470 IKEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKR 1529
IK + ++ + + + RR V +R + ++
Sbjct: 1262 IKNQDCTNILELCNTSDSDGDSADDLDDSDLPKTSSGRR----RVHNWKRRSRGSSCIES 1317
Query: 1530 PFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYES 1589
+W+ +C+ +L ++ C DSEPFR+PVD +++PDY I+ PMD GT+RE L NY+S
Sbjct: 1318 --DWRRQCKALLILIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLEAGNYDS 1375
Query: 1590 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWN-SHKNKENKKD 1648
P++F KD++ +F N++ Y NKRSKIY MT RLS EE +++++ + K KE +
Sbjct: 1376 PVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISFDFKIGQKFKEKLRR 1435
Query: 1649 S 1649
S
Sbjct: 1436 S 1436
Score = 396 (144.5 bits), Expect = 4.8e-28, Sum P(3) = 4.8e-28
Identities = 85/235 (36%), Positives = 134/235 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+R R +RFYRR+++ ++VRY+ NA FNEP S I + A+ ITD LL+ IK +
Sbjct: 1208 LYTIRMRLVHRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITDQLLKFIKNQDC 1267
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
++ + + + RR V +R + ++ +W+
Sbjct: 1268 TNILELCNTSDSDGDSADDLDDSDLPKTSSGRR----RVHNWKRRSRGSSCIES--DWRR 1321
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK 180
+C+ +L ++ C DSEPFR+PVD +++PDY I+ PMD GT+RE L NY+SP++F K
Sbjct: 1322 QCKALLILIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVEFCK 1381
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWN-SHKNKENKKDS 234
D++ +F N++ Y NKRSKIY MT RLS EE +++++ + K KE + S
Sbjct: 1382 DIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISFDFKIGQKFKEKLRRS 1436
Score = 40 (19.1 bits), Expect = 1.3e-256, Sum P(5) = 1.3e-256
Identities = 15/51 (29%), Positives = 19/51 (37%)
Query: 893 VDLNGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGER 943
V NG P R R + D + P+I G VE V +N R
Sbjct: 676 VTANGLPNEEGTPRRGSFRRLSLDIQSPPNIGLRRSGQVEGVRQMHQNAPR 726
Score = 40 (19.1 bits), Expect = 1.1e-144, Sum P(4) = 1.1e-144
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 1127 KRVRRHTKVKPIQVSLPKQLIPEEVP 1152
K+ R TKV P + P Q +VP
Sbjct: 1461 KQFRSQTKVIPQLMCSPSQSTSSKVP 1486
Score = 40 (19.1 bits), Expect = 4.7e-143, Sum P(3) = 4.7e-143
Identities = 16/68 (23%), Positives = 24/68 (35%)
Query: 1747 DPEQPGPSTS-YAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKK 1805
D + P S+S Y++ A T + EDE S ++ K+
Sbjct: 855 DSDSPSESSSQYSDWTADTGVHLEPPLRTSCRRRVTRFCSTSEDEMSTENISPPKRRRKR 914
Query: 1806 LKVLYPKR 1813
K PKR
Sbjct: 915 RKESKPKR 922
Score = 39 (18.8 bits), Expect = 1.3e-256, Sum P(5) = 1.3e-256
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 1116 WIHE-GVNLEPPKRV---RRHTK 1134
W + GV+LEPP R RR T+
Sbjct: 869 WTADTGVHLEPPLRTSCRRRVTR 891
Score = 37 (18.1 bits), Expect = 1.3e-256, Sum P(5) = 1.3e-256
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKL 1806
E+S+SES +P + + KKL
Sbjct: 1650 EDSSSESPCSGRKLPHRNASAVARKKL 1676
>ZFIN|ZDB-GENE-050208-261 [details] [associations]
symbol:phip "pleckstrin homology domain interacting
protein" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017956 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 SMART:SM00384 ZFIN:ZDB-GENE-050208-261
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:CR759802 EMBL:CR735144 IPI:IPI00634562
Ensembl:ENSDART00000138106 Bgee:E9QJ97 Uniprot:E9QJ97
Length = 1805
Score = 1407 (500.3 bits), Expect = 3.0e-255, Sum P(3) = 3.0e-255
Identities = 310/698 (44%), Positives = 409/698 (58%)
Query: 296 AMETERLTRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLA 355
A E + + +L EL LI ++LE GPC +AA+ L V+ K LLP+R DW G H +
Sbjct: 2 AAERKHVAQLKSELYFLIARFLEAGPCQDAAETLIREVQQKELLPKRIDWTGKEHPGSYE 61
Query: 356 EVASSHPNVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLS 415
+ + +++ L ++C+R+ PLL++E+ + P KS K V+
Sbjct: 62 NLVKLYRHISPDHLLQVCERVSPLLEREVPASVPGVNSLLGTGRQSVLRTNKS-CKHVVW 120
Query: 416 SYDYIARQHGTSLLVPNSV--KVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNL 473
+A H P + N + SR +G ++ + Y +++ H L
Sbjct: 121 KGSALAALHCGRPPEPPVIFGSPPNIAETIHSRRLNGSYRLGQLVPTAVYQHMKMHKRIL 180
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GHLS+V+CV FD+ G I TG+DD L+K+W DG LLATLRG + EISD+A++ N LL
Sbjct: 181 GHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGHLLATLRGHAAEISDMAVNYENTLL 240
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
AAG+ DK IR+W LQT AP++VL GH IT + F PL +L+ST DG I FW++
Sbjct: 241 AAGSCDKMIRVWCLQTCAPLAVLEGHAASITSLQFSPLCSGNKRFLSSTGADGTICFWQW 300
Query: 594 KLDIDISKTVFHE-PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
D F + P F ER RPG ++CSSFS GG+FLATGS DH +RVY G
Sbjct: 301 ----DARTLKFGQRPSKFIERPRPG-VQMICSSFSAGGMFLATGSTDHIIRVYYFGG-GQ 354
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP--H 710
P I E+E H+DKVDSIQ+SHS RFVSGSRDGTA IW + WR I LDM T LP +
Sbjct: 355 PEKISELESHTDKVDSIQFSHSGDRFVSGSRDGTARIWQLQQQDWRSILLDMATKLPGKY 414
Query: 711 TKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVL 770
++ K+KVTMVAWD +D VITA N N +K+W+++ G+L+ VL GH +EVFVL
Sbjct: 415 NPPPLEDKVTKLKVTMVAWDCNDNTVITAAN-NLTLKVWNSYTGNLIHVLMGHEDEVFVL 473
Query: 771 ESHPFDSRVLLSAGHDGLIIIWDILSS-KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTC 829
E HPFDSRVL SAGHDG I+WD+ K R Y N++EGQG GA+FD K SPDG
Sbjct: 474 EPHPFDSRVLFSAGHDGNAIVWDLARGVKIRSY---FNMIEGQGHGAVFDCKCSPDGQHF 530
Query: 830 ALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPP 889
A TDS+GHLL++G G R I ++FFHTDYR L R F DE T PHLMPP
Sbjct: 531 ACTDSHGHLLIFGFGSSSRYDKIADQMFFHTDYRPLIRDAHNF--VLDEQTQQAPHLMPP 588
Query: 890 PFLVDLNGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEG 949
PFLVD++G P+PP QRLVPGREN + +L+P + G ++V G P++
Sbjct: 589 PFLVDVDGNPHPPRFQRLVPGRENCREEQLIPQMGLTSSGLNQVVSQQAAEGSSPLDSMI 648
Query: 950 QRHYNDHGHVYIQTSHVHVLRSRAN-GESSAATEGTSP 986
QR + Q + SRAN G S+ TE TSP
Sbjct: 649 QRLQQE------QDQRLGS-DSRANRGSVSSPTEVTSP 679
Score = 1043 (372.2 bits), Expect = 3.0e-255, Sum P(3) = 3.0e-255
Identities = 208/531 (39%), Positives = 315/531 (59%)
Query: 1126 PKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFKQG 1185
PK+ + K K I + L EE + PS+W+ + +P++ P+ PQMGDEV +F+QG
Sbjct: 901 PKKKKPKEKRKRIPELQNQGLTLEE----WLPSNWITDTMPRRCPFTPQMGDEVYYFRQG 956
Query: 1186 YQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMKPN 1245
++ YV+ + I+ ++ + PW L L+E EL+K+VGIKYE+ P +CCLKLA + P+
Sbjct: 957 HEAYVEMAKKNKIFSINP-KKQPWHKLELREQELLKIVGIKYEVGLPTLCCLKLAFLDPD 1015
Query: 1246 -GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIEGK- 1303
GKLT F+IKYHDMPDVIDF VLRQ ++ A R W +GDRF ++IDDAWW+GTIE +
Sbjct: 1016 SGKLTGGSFSIKYHDMPDVIDFLVLRQQFDNARQRNWMIGDRFRAVIDDAWWFGTIESQE 1075
Query: 1304 PSPTKSP---FLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEIQELLY 1359
P + P F Y + WDN + E +SPWD+E P E E G S+ + +E + LLY
Sbjct: 1076 PYQAEYPDSLFQCYNVCWDNGDTEKMSPWDMEEVPDEVVFPEELGLSMALTQDEQKALLY 1135
Query: 1360 HPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTL 1419
P EW R+ CE+II G+ ++ L VA+PF +PVD+ DL+T+
Sbjct: 1136 KPLDGEWGSRTRNQECERIIRGINQLCTLDVAKPFELPVDLQAYPTYCTVVAYVTDLSTI 1195
Query: 1420 RARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVP 1479
R R +NRFYRR++S ++VRY+ NA+ FNEP + IV+ A+ ++DL+L+ IK+ + D+
Sbjct: 1196 RQRLENRFYRRMSSLMWEVRYIEHNAQTFNEPGAFIVRTAKFVSDLMLQFIKDQSCTDII 1255
Query: 1480 VVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQR---EAMNQKKLKRPFNWKNE 1536
+Y+ + + + + Q+ ++ K P WK
Sbjct: 1256 PLYNSMKKTAFSDSSDDEDEDEDEEHEAPCTSNRNKKQQQPMLRSLRSKPSSDPQAWKER 1315
Query: 1537 CREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKD 1596
CRE+LE ++ C DSEPFR+PVD ++PDY IV PMD GT+ L Y++P+D KD
Sbjct: 1316 CRELLELIFQCEDSEPFRQPVDLDEYPDYLDIVDTPMDFGTVLNRLLAGEYDTPMDLCKD 1375
Query: 1597 VKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 1647
V+ +F NS+ Y +K+S+IY M+ RLS EEH+ + + + ++ +++
Sbjct: 1376 VRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHISSILTDFKAAQSLHSER 1426
Score = 418 (152.2 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 82/235 (34%), Positives = 136/235 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L+T+R R +NRFYRR++S ++VRY+ NA+ FNEP + IV+ A+ ++DL+L+ IK+ +
Sbjct: 1192 LSTIRQRLENRFYRRMSSLMWEVRYIEHNAQTFNEPGAFIVRTAKFVSDLMLQFIKDQSC 1251
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQR---EAMNQKKLKRPFN 117
D+ +Y+ + + + + Q+ ++ K P
Sbjct: 1252 TDIIPLYNSMKKTAFSDSSDDEDEDEDEEHEAPCTSNRNKKQQQPMLRSLRSKPSSDPQA 1311
Query: 118 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
WK CRE+LE ++ C DSEPFR+PVD ++PDY IV PMD GT+ L Y++P+D
Sbjct: 1312 WKERCRELLELIFQCEDSEPFRQPVDLDEYPDYLDIVDTPMDFGTVLNRLLAGEYDTPMD 1371
Query: 178 FVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 232
KDV+ +F NS+ Y +K+S+IY M+ RLS EEH+ + + + ++ +++
Sbjct: 1372 LCKDVRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHISSILTDFKAAQSLHSER 1426
Score = 48 (22.0 bits), Expect = 3.0e-255, Sum P(3) = 3.0e-255
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVK 1136
W + G+NLEPPK+ K K
Sbjct: 848 WTADAGINLEPPKKTSVKKKKK 869
Score = 45 (20.9 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 1780 EESASESQEDENSIPETDT--TEQPAKKLKVLYPKRRGQQS--EDGSGDNASEMSELKQD 1835
E S+S + S D +P KK V K++ S EDG S+ K+
Sbjct: 834 ENSSSSDYSSDYSDWTADAGINLEPPKKTSVKKKKKKNASSSEEDGEKKKDSKKERRKEK 893
Query: 1836 P 1836
P
Sbjct: 894 P 894
Score = 42 (19.8 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 27/120 (22%), Positives = 45/120 (37%)
Query: 847 KRPQNIPRELFFHTDYRTL-NRPNGLFEPTYDEVTNLP-----PHLMPPPFLVDLNGTPY 900
K+ PR F H + L +G T + +NL P P + TP
Sbjct: 1647 KKDTESPRRNFSHEEELMLPTGDDGGASSTAQD-SNLSDSGEYPKARGRPRITKTIDTPA 1705
Query: 901 PPEVQRLVPGRENADDTELLPDIT---TNDDGHVEIVEGSERNGERPVEVEGQR--HYND 955
PP + L ++ E+ P + +++ V I E G+ +G+R YN+
Sbjct: 1706 PPSPKTLRRSSRRGNE-EITPHTSGSAQSEEPEVYIGEDGSSKGQMKTRNQGRRTAFYNE 1764
Score = 40 (19.1 bits), Expect = 2.1e-149, Sum P(3) = 2.1e-149
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNA 1826
+S+ + EDE+ E T KK + P R +S+ S A
Sbjct: 1268 DSSDDEDEDEDEEHEAPCTSNRNKKQQ--QPMLRSLRSKPSSDPQA 1311
Score = 40 (19.1 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 1780 EESA--SESQEDENSIPETDTTEQPAKK 1805
EE++ SE E+E+S E +T +P +
Sbjct: 791 EETSRQSEPNEEEHSASEGETEVRPPSR 818
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 1365 (485.6 bits), Expect = 4.9e-255, Sum P(3) = 4.9e-255
Identities = 296/659 (44%), Positives = 394/659 (59%)
Query: 298 ETERLTRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEV 357
E + L+ L EL LI ++LE GPC +AA+VL V K LLP R DW G H +T +
Sbjct: 4 ERKGLSELRSELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTDWTGKEHPRTYQNL 63
Query: 358 ASSHPNVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSY 417
+ ++ L +IC RLGPLL++E+ + P KS K V+
Sbjct: 64 VKYYRHLAPDHLLQICHRLGPLLEQEIPQSVPGVQTLLGAGRQSLLRTNKS-CKHVVWKG 122
Query: 418 DYIARQH-GTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGH 475
+A H G P N + + L SR+ +G ++ + Y +++ H LGH
Sbjct: 123 SALAALHCGRPPESPVNYGSPPSIADTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGH 182
Query: 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAA 535
LS+V+CV FD+ G I TG+DD L+K+W DG+LLATLRG + EISD+A++ N ++AA
Sbjct: 183 LSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAA 242
Query: 536 GTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595
G+ DK IR+W L+T AP++VL GH IT + F PL YL+ST DG I FW +
Sbjct: 243 GSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLW-- 300
Query: 596 DIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLG 655
D K + P F ER RPG ++CSSFS GG+FLATGS DH +RVY G P
Sbjct: 301 DAGTLK-INPRPAKFTERPRPG-VQMICSSFSAGGMFLATGSTDHIIRVYFF-GSGQPEK 357
Query: 656 ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETS 715
I E+E H+DKVDSIQ+S++ RFVSGSRDGTA IW +K +W+ I LDM T P +
Sbjct: 358 ISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFKRREWKSILLDMAT-RPAGQNLQ 416
Query: 716 DETNK--KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESH 773
+K K+KVTMVAWD D VITA+N N +K+W+++ G L+ VL GH +EVFVLE H
Sbjct: 417 GIEDKITKMKVTMVAWDRHDNTVITAVN-NMTLKVWNSYTGQLIHVLMGHEDEVFVLEPH 475
Query: 774 PFDSRVLLSAGHDGLIIIWDILSS-KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALT 832
PFD RVL SAGHDG +I+WD+ K R Y F N++EGQG GA+FD K SPDG A T
Sbjct: 476 PFDPRVLFSAGHDGNVIVWDLARGVKIRSY--F-NMIEGQGHGAVFDCKCSPDGQHFACT 532
Query: 833 DSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFL 892
DS+GHLL++G G + I ++FFH+DYR L R F DE T PHLMPPPFL
Sbjct: 533 DSHGHLLIFGFGSSSKYDKIADQMFFHSDYRPLIRDANNF--VLDEQTQQAPHLMPPPFL 590
Query: 893 VDLNGTPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQR 951
VD++G P+P QRLVPGREN + +L+P + G +++ P++ QR
Sbjct: 591 VDVDGNPHPSRYQRLVPGRENCREEQLIPQMGVTSSGLNQVLSQQANQEISPLDSMIQR 649
Score = 1080 (385.2 bits), Expect = 4.9e-255, Sum P(3) = 4.9e-255
Identities = 215/516 (41%), Positives = 305/516 (59%)
Query: 1123 LEPPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 1180
+ P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV
Sbjct: 910 ISPKKKKPKERKQKRLAVGELTENGLTLEE----WLPSTWITDTIPRRCPFVPQMGDEVY 965
Query: 1181 FFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLA 1240
+F+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA
Sbjct: 966 YFRQGHEAYVEMARKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLA 1024
Query: 1241 VMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGT 1299
+ P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAWW+GT
Sbjct: 1025 FLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFRSVIDDAWWFGT 1084
Query: 1300 IEGK-PSPTKSP---FLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEI 1354
IE + P + P F Y + WDN + E +SPWD+E P E G S+P+ E
Sbjct: 1085 IESQEPLQLEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDGEC 1144
Query: 1355 QELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX 1414
+ L+Y P EW RD CE+I+ G+ ++M L +A F+ PVD+
Sbjct: 1145 RSLIYKPLDGEWGTNPRDEECERIVAGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPT 1204
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL+T++ R +NRFYRR++S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 1205 DLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQT 1264
Query: 1475 PVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWK 1534
++ +Y+ + + R R R R N+ + WK
Sbjct: 1265 CYNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTRKRKDHQPR--RRLRNRAQSYDIQAWK 1322
Query: 1535 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFV 1594
+C E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYESP++
Sbjct: 1323 KQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELC 1382
Query: 1595 KDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
KDV+ +F NS+ Y +KRS+IY M+ RLS F EEH+
Sbjct: 1383 KDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 1418
Score = 439 (159.6 bits), Expect = 8.8e-37, P = 8.8e-37
Identities = 88/215 (40%), Positives = 126/215 (58%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L+T++ R +NRFYRR++S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 1206 LSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTC 1265
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
++ +Y+ + + R R R R N+ + WK
Sbjct: 1266 YNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTRKRKDHQPR--RRLRNRAQSYDIQAWKK 1323
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK 180
+C E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYESP++ K
Sbjct: 1324 QCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCK 1383
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 215
DV+ +F NS+ Y +KRS+IY M+ RLS F EEH+
Sbjct: 1384 DVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 1418
Score = 51 (23.0 bits), Expect = 4.9e-255, Sum P(3) = 4.9e-255
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVKPIQVS 1141
W + G+NL+PPK+V ++ K K + S
Sbjct: 855 WTADAGINLQPPKKVPKN-KTKKAESS 880
Score = 51 (23.0 bits), Expect = 1.1e-142, Sum P(2) = 1.1e-142
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
EE+ S+E EN +D E A + R S+ S D +S+ S+ D
Sbjct: 803 EETPRPSEEIENGSSSSDEGEVVAVSGGTSEEEERAWHSDGSSSDYSSDYSDWTAD 858
Score = 46 (21.3 bits), Expect = 3.8e-142, Sum P(2) = 3.8e-142
Identities = 24/94 (25%), Positives = 35/94 (37%)
Query: 1749 EQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESA--SESQEDENSIPETDTTE------ 1800
E P PS +S+ EE A S+ + S +D T
Sbjct: 804 ETPRPSEEIENGSSSSDEGEVVAVSGGTSEEEERAWHSDGSSSDYSSDYSDWTADAGINL 863
Query: 1801 QPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQ 1834
QP KK+ PK + +++E S D E + KQ
Sbjct: 864 QPPKKV----PKNKTKKAESSS-DEEEESEKQKQ 892
>UNIPROTKB|F1N8L6 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
OMA:MTGNNLP InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02013450
EMBL:AADN02013451 IPI:IPI00578454 Ensembl:ENSGALT00000011586
Uniprot:F1N8L6
Length = 1495
Score = 1280 (455.6 bits), Expect = 2.6e-253, Sum P(4) = 2.6e-253
Identities = 271/595 (45%), Positives = 364/595 (61%)
Query: 363 NVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIAR 422
++ +L +IC+RLGPLLDKE+ + K ++ + A
Sbjct: 3 HIPPDYLLRICERLGPLLDKEIPQSVLGVQTLLGVGRQSLLRAAKDFRHTLWKGSAFAAL 62
Query: 423 QHGTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFC 481
G +P N K N VN+L +R+ +G S + + Y ++ H LGHLS+V+C
Sbjct: 63 HRGRPPELPVNYGKPPNVVNILSARQLTGCGRFSHLFPTSTYQQMKMHKRILGHLSSVYC 122
Query: 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541
+ FD+ G I TG+DD L+K+W DG+LL+TLRG S EISD+A++ N LLAAG+ DK
Sbjct: 123 IAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLAAGSCDKI 182
Query: 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601
+R+W L+T AP++VL GH IT + F P YL ST DG I FW++ + K
Sbjct: 183 VRVWCLRTCAPVAVLQGHSASITSIQFSPARKGTTRYLTSTGADGTICFWQWHANTMKFK 242
Query: 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE 661
PV F ER RPG I CSSFS GG+F+ATGS DH +R+Y + G +SP + E+E
Sbjct: 243 D---RPVKFAERSRPG-VQISCSSFSSGGMFIATGSTDHVIRIYYL-GSESPEKMAELES 297
Query: 662 HSDKVDSIQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN 719
H+DKV ++Q+ ++ LRFVSGSRDGTA +W Y +W+ + LDM T + S E
Sbjct: 298 HTDKVVAVQFCNNGDSLRFVSGSRDGTARVWQYHQQEWKSVVLDMATKMTGNNVASGEDK 357
Query: 720 -KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR 778
K+KVTMVAWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD R
Sbjct: 358 VTKLKVTMVAWDRYDATVITAVN-NFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFDQR 416
Query: 779 VLLSAGHDGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGH 837
++LSAGHDG I IWDI +K R Y N++EGQG GA+FD K+SPDG A TDS+GH
Sbjct: 417 IVLSAGHDGNIFIWDIDKGTKIRNY---FNMIEGQGHGAVFDCKFSPDGQHFACTDSHGH 473
Query: 838 LLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNG 897
LL++G G K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD++G
Sbjct: 474 LLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDVDG 531
Query: 898 TPYPPEVQRLVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 949
P+P QRLVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 532 NPHPTRFQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDG 586
Score = 974 (347.9 bits), Expect = 2.6e-253, Sum P(4) = 2.6e-253
Identities = 198/489 (40%), Positives = 286/489 (58%)
Query: 1119 EGVNLEPPKRV-RRHTKVKPIQVSLPKQLIPEE-VP-DIYKPSDWLAEVVPKKAPYYPQM 1175
E NL+ K V ++ K+K + P L+ E P + + W+ + +P+++P+ PQM
Sbjct: 826 EDENLKGTKGVEQKRRKLKQPRKKKPSGLLSMEGEPSEEWLAPQWILDTIPRRSPFVPQM 885
Query: 1176 GDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMC 1235
GDE+++F+QG++ YV AVR IY ++ ++ PW + L+E E VK VGIKYE+ PP +C
Sbjct: 886 GDEIIYFRQGHEAYVRAVRKAKIYSIN-MQKQPWNKMELREQEFVKTVGIKYEVGPPTLC 944
Query: 1236 CLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA 1294
CLKLA + P GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDA
Sbjct: 945 CLKLAFLDPITGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDA 1004
Query: 1295 WWWGTIEGK-PSPTKSP---FLGYKILWDNNERENLSPWDLEPPKEGKEATEP-GGSLPV 1349
WW+GT+E + P + P F Y + WDNNERE +SPWD+EP EG E G +PV
Sbjct: 1005 WWFGTVESQQPFQAEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAYPEEVGAGVPV 1064
Query: 1350 EPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXX 1409
P+E+ LLY P+ EW RD CE++I G+E+++ L ++ PF VPVD+S
Sbjct: 1065 TPDELTALLYKPQEGEWGAHSRDEECERVIRGIEQLLSLDISNPFAVPVDLSAYPMYCTV 1124
Query: 1410 XXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRI 1469
DLTT+R R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR
Sbjct: 1125 VAYPTDLTTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRF 1184
Query: 1470 IKEPNPVDVPVVYHEL-LQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLK 1528
I + + D+ +Y+++ ++ + R +R Q
Sbjct: 1185 IGDQSCTDILDIYNKVKAEDLSSTDEEEEVAEVDVDSDAPGTSSGKQRVRRRIKRQPMKG 1244
Query: 1529 RPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYE 1588
P WK +C+++L ++ DSEPFR+PVD +P V L + L G+NY
Sbjct: 1245 SPDAWKEQCKQLLNLIYEREDSEPFRQPVDLFSYP-----VSTTSILNSQISVLSGNNYI 1299
Query: 1589 SPIDFVKDV 1597
+ I +D+
Sbjct: 1300 TAIVDYRDI 1308
Score = 259 (96.2 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 61/183 (33%), Positives = 95/183 (51%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
LTT+R R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I + +
Sbjct: 1131 LTTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSC 1190
Query: 61 VDVPVVYHEL-LQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWK 119
D+ +Y+++ ++ + R +R Q P WK
Sbjct: 1191 TDILDIYNKVKAEDLSSTDEEEEVAEVDVDSDAPGTSSGKQRVRRRIKRQPMKGSPDAWK 1250
Query: 120 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFV 179
+C+++L ++ DSEPFR+PVD +P V L + L G+NY + I
Sbjct: 1251 EQCKQLLNLIYEREDSEPFRQPVDLFSYP-----VSTTSILNSQISVLSGNNYITAIVDY 1305
Query: 180 KDV 182
+D+
Sbjct: 1306 RDI 1308
Score = 190 (71.9 bits), Expect = 2.6e-253, Sum P(4) = 2.6e-253
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 1564 DYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLS 1623
DY IV PMD T++E L NY SP++F KD++ +F NS+ Y NK+S+IY MT RLS
Sbjct: 1304 DYRDIVDTPMDFSTVKETLEAGNYTSPLEFYKDIRLIFCNSKAYTPNKKSRIYSMTLRLS 1363
Query: 1624 EFAEEHLRRLTVRWNSHKNKENKK 1647
E H++ + + S + +K
Sbjct: 1364 ALFENHMKNIISEYKSAMQCQKRK 1387
Score = 190 (71.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 149 DYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLS 208
DY IV PMD T++E L NY SP++F KD++ +F NS+ Y NK+S+IY MT RLS
Sbjct: 1304 DYRDIVDTPMDFSTVKETLEAGNYTSPLEFYKDIRLIFCNSKAYTPNKKSRIYSMTLRLS 1363
Query: 209 EFAEEHLRRLTVRWNSHKNKENKK 232
E H++ + + S + +K
Sbjct: 1364 ALFENHMKNIISEYKSAMQCQKRK 1387
Score = 105 (42.0 bits), Expect = 5.6e-143, Sum P(3) = 5.6e-143
Identities = 27/77 (35%), Positives = 37/77 (48%)
Query: 1536 ECREVL---ETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 1592
EC V+ E L S PF PVD +P Y +V P DL TIR L Y
Sbjct: 1089 ECERVIRGIEQLLSLDISNPFAVPVDLSAYPMYCTVVAYPTDLTTIRRRLENRFYRRISA 1148
Query: 1593 FVKDVKRVFHNSRNYNQ 1609
+ +V+ + HN+R +N+
Sbjct: 1149 LMWEVRYIEHNARTFNE 1165
Score = 105 (42.0 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 27/77 (35%), Positives = 37/77 (48%)
Query: 121 ECREVL---ETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
EC V+ E L S PF PVD +P Y +V P DL TIR L Y
Sbjct: 1089 ECERVIRGIEQLLSLDISNPFAVPVDLSAYPMYCTVVAYPTDLTTIRRRLENRFYRRISA 1148
Query: 178 FVKDVKRVFHNSRNYNQ 194
+ +V+ + HN+R +N+
Sbjct: 1149 LMWEVRYIEHNARTFNE 1165
Score = 49 (22.3 bits), Expect = 2.6e-253, Sum P(4) = 2.6e-253
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVK 1136
W + G+NL+PPKR R K
Sbjct: 799 WTADAGINLQPPKRQTRQAARK 820
Score = 46 (21.3 bits), Expect = 3.7e-133, Sum P(2) = 3.7e-133
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
EES S S+EDE + + P QS+ S D++SE S+ D
Sbjct: 757 EESDSSSEEDETVGTSDASVDDPVATW----------QSDSSSSDSSSEYSDWTAD 802
Score = 43 (20.2 bits), Expect = 1.9e-136, Sum P(3) = 1.9e-136
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRR 1814
S EDEN + T EQ +KLK P+++
Sbjct: 824 SSEDEN-LKGTKGVEQKRRKLK--QPRKK 849
Score = 41 (19.5 bits), Expect = 1.2e-132, Sum P(2) = 1.2e-132
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 1057 RTRAEYSEHIQDQYEDP 1073
RT + S H+ D E+P
Sbjct: 1433 RTSSSVSSHVSDTTEEP 1449
Score = 38 (18.4 bits), Expect = 2.6e-132, Sum P(2) = 2.6e-132
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 963 TSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKN 997
+SHV G ++ PS + AQN++
Sbjct: 1439 SSHVSDTTEEPLGSAAGEEVEVQPSSSGSNAQNRS 1473
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 1306 (464.8 bits), Expect = 5.4e-249, Sum P(3) = 5.4e-249
Identities = 283/630 (44%), Positives = 378/630 (60%)
Query: 327 KVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPKICQRLGPLLDKELKP 386
+VL V K LLP+R DW G H ++ + + ++ L +IC RLGPLL++E+
Sbjct: 23 QVLIREVAEKELLPKRTDWTGKEHPRSYQNLVKYYRHLAPDHLLQICHRLGPLLEQEIPQ 82
Query: 387 NFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH-GTSLLVP-NSVKVHNTVNVLR 444
+ P KS K V+ +A H G P N + V+ L
Sbjct: 83 SVPGVQTLLGAGRQSLLRTNKS-CKHVVWKGSALAALHCGRPPESPVNYGSPPSIVDTLF 141
Query: 445 SREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 504
SR+ +G ++ + Y +++ H LGHLS+V+CV FD+ G I TG+DD L+K+W
Sbjct: 142 SRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWA 201
Query: 505 ARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIIT 564
DG+LLATLRG + EISD+A++ N ++AAG+ DK IR+W L+T AP++VL GH IT
Sbjct: 202 TDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASIT 261
Query: 565 GVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS 624
+ F PL YL+ST DG I FW + D K + P F ER RPG ++CS
Sbjct: 262 SLQFSPLCSGSKRYLSSTGADGTICFWLW--DAGTLK-INPRPTKFTERPRPG-VQMICS 317
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
SFS GG+FLATGS DH +RVY G P I E+E H+DKVDSIQ+S+S RFVSGSRD
Sbjct: 318 SFSAGGMFLATGSTDHIIRVYFF-GSGQPEKISELEFHTDKVDSIQFSNSSSRFVSGSRD 376
Query: 685 GTALIWYYKCSQWRFIRLDMNTCLP--HTKETSDETNKKIKVTMVAWDASDRWVITAINF 742
GTA IW +K +W+ I LDM T P T + ++ K+KVTMVAWD D VITA+N
Sbjct: 377 GTARIWQFKRREWKSILLDMAT-RPSGQTLQGVEDKITKLKVTMVAWDRHDNSVITAVN- 434
Query: 743 NFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS-KQRG 801
N +K+W++F G L+ +L GH +EVFVLE HPFD RVL SAGHDG +I+WD+ K R
Sbjct: 435 NMTLKVWNSFTGQLIHILMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGVKIRS 494
Query: 802 YKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 861
Y F N++EGQG GA+FD K SPDG A TDS+GHLL++G G + I ++FFH+D
Sbjct: 495 Y--F-NMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQMFFHSD 551
Query: 862 YRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTELLP 921
YR L R F DE T PHLMPPPFLVD++G P+P QRLVPGREN + +L+P
Sbjct: 552 YRPLIRDANNF--VLDEQTQQAPHLMPPPFLVDVDGNPHPARYQRLVPGRENCREEQLIP 609
Query: 922 DITTNDDGHVEIVEGSERNGERPVEVEGQR 951
+ G +++ P++ QR
Sbjct: 610 QMGVTSSGLNQVLSQQANQEVSPLDSMIQR 639
Score = 1085 (387.0 bits), Expect = 5.4e-249, Sum P(3) = 5.4e-249
Identities = 222/547 (40%), Positives = 323/547 (59%)
Query: 1119 EGVNLEPPKRVRRHTKVKPIQVSLPKQ--LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMG 1176
+G + P KR + K K + V + + L EE + PS W+ + VP++ P+ PQMG
Sbjct: 898 DGPSTSPKKRKPKERKQKRLAVGVLAENGLTLEE----WLPSAWITDTVPRRCPFVPQMG 953
Query: 1177 DEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCC 1236
DEV +F+QG++ YV + IY ++ + PW + L+E EL+K+VGIKYE+ P +CC
Sbjct: 954 DEVYYFRQGHEAYVVMAKKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCC 1012
Query: 1237 LKLAVMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAW 1295
LKLA + P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAW
Sbjct: 1013 LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKHRRWNIGDRFRSVIDDAW 1072
Query: 1296 WWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVE 1350
W+GTIE + P S F Y + WDN + E +SPWD+E P E G S+P+
Sbjct: 1073 WFGTIESQEPLQPDYPDSLFQCYNVCWDNGDTEKMSPWDMELIPTNAVFPEELGTSVPLT 1132
Query: 1351 PEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXX 1410
EE + LLY P EW RD C++II G+ ++M L +A F+ PVD+
Sbjct: 1133 DEERRTLLYKPLDGEWGSRTRDQECDRIIAGINQLMTLDIASAFVAPVDLQAYPMYCTVV 1192
Query: 1411 XXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRII 1470
DL+T++ R ++RFYRR++S ++VRY+ N FNEP S IVK A+ +TDLLL I
Sbjct: 1193 AYPTDLSTIKQRLESRFYRRLSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFI 1252
Query: 1471 KEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRP 1530
K+ + D+ ++Y+ + + + V P TR +++ +++L+
Sbjct: 1253 KDQSCYDIILLYNAMKKKVLSDSDEEEE------KDTNV-PGTSTRKRKDHQPKRRLRNR 1305
Query: 1531 F------NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRG 1584
+WK +C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L
Sbjct: 1306 AQSYDIQSWKKQCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEA 1365
Query: 1585 DNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNS----H 1640
NYESP++ KDV+ +F NS+ Y +KRS+IY M+ RLS F EEH+ + + S H
Sbjct: 1366 GNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSILSDYKSALRFH 1425
Query: 1641 KNKENKK 1647
K K+
Sbjct: 1426 KRNTIKR 1432
Score = 440 (159.9 bits), Expect = 6.9e-37, P = 6.9e-37
Identities = 92/242 (38%), Positives = 143/242 (59%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L+T++ R ++RFYRR++S ++VRY+ N FNEP S IVK A+ +TDLLL IK+ +
Sbjct: 1198 LSTIKQRLESRFYRRLSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQSC 1257
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPF---- 116
D+ ++Y+ + + + V P TR +++ +++L+
Sbjct: 1258 YDIILLYNAMKKKVLSDSDEEEE------KDTNV-PGTSTRKRKDHQPKRRLRNRAQSYD 1310
Query: 117 --NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYES 174
+WK +C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYES
Sbjct: 1311 IQSWKKQCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYES 1370
Query: 175 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNS----HKNKEN 230
P++ KDV+ +F NS+ Y +KRS+IY M+ RLS F EEH+ + + S HK
Sbjct: 1371 PMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSILSDYKSALRFHKRNTI 1430
Query: 231 KK 232
K+
Sbjct: 1431 KR 1432
Score = 52 (23.4 bits), Expect = 5.4e-249, Sum P(3) = 5.4e-249
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVKPIQVSLPKQLIPEE 1150
W + G+NL+PPK++ + K K + S + PE+
Sbjct: 847 WTADAGINLQPPKKIPK-LKTKKAESSSEDEEGPEK 881
Score = 49 (22.3 bits), Expect = 5.8e-107, Sum P(3) = 5.8e-107
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 635 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675
T G+ VRVY+ + + ++ + +K+ + +HSH
Sbjct: 731 TAKGEEEVRVYRSE--EKRKHVMSHIQRENKIPTFSKNHSH 769
Score = 47 (21.6 bits), Expect = 1.0e-135, Sum P(2) = 1.0e-135
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1801 QPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
QP KK+ L K+ SED G + ++K++
Sbjct: 856 QPPKKIPKLKTKKAESSSEDEEGPE-KQKKQIKKE 889
Score = 44 (20.5 bits), Expect = 2.1e-135, Sum P(2) = 2.1e-135
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
EE A ++E EN +D E R S+ S D +S+ S+ D
Sbjct: 795 EEPARPAEELENGHSSSDEGEVVVASGGTSEDDERAWHSDGSSSDYSSDYSDWTAD 850
Score = 41 (19.5 bits), Expect = 7.6e-139, Sum P(3) = 7.6e-139
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1783 ASESQEDENSIPETDTTEQPAKKLKVLYPKRR 1814
+ E +E + ++P T T +K K PKRR
Sbjct: 1275 SDEEEEKDTNVPGTST-----RKRKDHQPKRR 1301
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 1434 (509.9 bits), Expect = 3.6e-248, Sum P(3) = 3.6e-248
Identities = 298/657 (45%), Positives = 407/657 (61%)
Query: 303 TRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHP 362
T+++ EL LI ++L+ GPC+++A+VL +E L+P R DWEG H ++ ++ +++
Sbjct: 6 TQIEAELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDLVAANA 65
Query: 363 NVTASFLPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIAR 422
++ +L KIC+R+GPLLDKE+ + P K ++ + + A
Sbjct: 66 HIPPDYLLKICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKNTLWNGSAFAAL 125
Query: 423 QHGTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFC 481
G +P N VK N VN+ R+ +G S Y +++ H LGHLS+V+C
Sbjct: 126 HRGRPPELPVNYVKPPNVVNIXSXRQXTGCSRFXHXFPSSAYQHIKMHKRILGHLSSVYC 185
Query: 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541
V FD+ G I TG+DD L+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK
Sbjct: 186 VAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKV 245
Query: 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601
+R+W L+T AP++VL GH IT + FCP YL ST DG I FW++ + K
Sbjct: 246 VRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHV-----K 300
Query: 602 TV-FHE-PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 659
T+ F + PV F ER RPG I CSSFS GG+F+ TGS DH +R+Y + G + P I E+
Sbjct: 301 TMKFRDRPVKFTERSRPG-VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEIPEKIAEL 358
Query: 660 EEHSDKVDSIQWSHS--HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717
E H+DKV + Q + LRFVSGSRDGTA IW Y+ +W+ I LDM T + TS E
Sbjct: 359 ESHTDKVVAXQXCXNGKSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMSGNNLTSTE 418
Query: 718 TN-KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD 776
K+KVTMVAWD D VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD
Sbjct: 419 DKVTKLKVTMVAWDRYDTTVITAVN-NFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFD 477
Query: 777 SRVLLSAGHDGLIIIWDI-LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 835
R++LSAGHDG I IWD+ +K R Y N++EGQG GA+FD K+SPDG A TDS+
Sbjct: 478 QRIILSAGHDGNIFIWDLDRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDSH 534
Query: 836 GHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDL 895
GHLL++G G K + IP ++FFHTDYR L R + DE T PHLMPPPFLVD+
Sbjct: 535 GHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDV 592
Query: 896 NGTPYPPEVQRLVPGRENADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 949
+G P+P + QRLVPGREN D +L+P + N DG V E V G + N + ++G
Sbjct: 593 DGNPHPTKFQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQEESILDG 649
Score = 947 (338.4 bits), Expect = 3.6e-248, Sum P(3) = 3.6e-248
Identities = 192/462 (41%), Positives = 269/462 (58%)
Query: 1160 WLAEVVPKKAPYYPQMGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPEL 1219
W+ + +P+++P+ PQMGDE+++F+QG++ YV AVR IY ++ L+ PW + L+E E
Sbjct: 925 WILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVN-LQKQPWNKMDLREQEF 983
Query: 1220 VKVVGIKYEIAPPRMCCLKLAVMKP-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIA 1278
VK+VGIKYEI PP +CCLKLA + P +GK+T E F+IKYHDMPDVIDF VL Q Y A
Sbjct: 984 VKIVGIKYEIGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKE 1043
Query: 1279 REWNVGDRFCSMIDDAWWWGTIEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEPP 1334
R W +GDRF S+IDDAWW+GT+E + P S F Y + WDNNERE +SPWD+EP
Sbjct: 1044 RNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPI 1103
Query: 1335 KEGKE-ATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEP 1393
EG E G +PV EE+ LLY P+ EW RD CE++I G+ ++ L A P
Sbjct: 1104 PEGTAFPDEVGAGIPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINNLLSLDFASP 1163
Query: 1394 FLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHS 1453
F VPVD+S DL T++ R +NRFYRRI++ ++VRY+ NA FNEP S
Sbjct: 1164 FAVPVDLSAYPLYCTVVAYPTDLNTIKQRLENRFYRRISALMWEVRYIEHNARTFNEPDS 1223
Query: 1454 NIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTA 1513
IVK A+I+TD+LLR I + + D+ Y+++ ++
Sbjct: 1224 PIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAENPNSSDPEEDTEMVDLDSDGPGTSS 1283
Query: 1514 VTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHP-----DYDKI 1568
RA+ Q P WK +C+E+L ++ DSEPFR+P D HP + +
Sbjct: 1284 GRRAKCRGRRQSLKCNPDAWKQQCKELLSLIYEREDSEPFRQPADPHSHPVAQQQEGESS 1343
Query: 1569 VIAPMDLG--TIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608
P D ++ E+ + D ++P+DF VK S NY+
Sbjct: 1344 ESVPPDRQDPSLSEDYQ-DVVDTPMDF-STVKETLE-SGNYD 1382
Score = 247 (92.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 64/200 (32%), Positives = 100/200 (50%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I + +
Sbjct: 1186 LNTIKQRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSC 1245
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
D+ Y+++ ++ RA+ Q P WK
Sbjct: 1246 TDILDTYNKIKAENPNSSDPEEDTEMVDLDSDGPGTSSGRRAKCRGRRQSLKCNPDAWKQ 1305
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHP-----DYDKIVIAPMDLG--TIREELRGDNYE 173
+C+E+L ++ DSEPFR+P D HP + + P D ++ E+ + D +
Sbjct: 1306 QCKELLSLIYEREDSEPFRQPADPHSHPVAQQQEGESSESVPPDRQDPSLSEDYQ-DVVD 1364
Query: 174 SPIDFVKDVKRVFHNSRNYN 193
+P+DF VK S NY+
Sbjct: 1365 TPMDF-STVKETLE-SGNYD 1382
Score = 193 (73.0 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 1556 PVDKLD---HPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 1612
P D+ D DY +V PMD T++E L NY+SP++F KDV+++F NS+ Y NK+
Sbjct: 1347 PPDRQDPSLSEDYQDVVDTPMDFSTVKETLESGNYDSPLEFYKDVRQIFSNSKAYTSNKK 1406
Query: 1613 SKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 1647
S+IY MT RLS E ++ + + S + ++
Sbjct: 1407 SRIYSMTLRLSALFENRIKNIISEYKSAIQSQKRR 1441
Score = 193 (73.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 141 PVDKLD---HPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKR 197
P D+ D DY +V PMD T++E L NY+SP++F KDV+++F NS+ Y NK+
Sbjct: 1347 PPDRQDPSLSEDYQDVVDTPMDFSTVKETLESGNYDSPLEFYKDVRQIFSNSKAYTSNKK 1406
Query: 198 SKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 232
S+IY MT RLS E ++ + + S + ++
Sbjct: 1407 SRIYSMTLRLSALFENRIKNIISEYKSAIQSQKRR 1441
Score = 100 (40.3 bits), Expect = 8.7e-159, Sum P(3) = 8.7e-159
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 1536 ECREVLE---TLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 1592
EC V++ L + PF PVD +P Y +V P DL TI++ L Y
Sbjct: 1144 ECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIKQRLENRFYRRISA 1203
Query: 1593 FVKDVKRVFHNSRNYNQ 1609
+ +V+ + HN+R +N+
Sbjct: 1204 LMWEVRYIEHNARTFNE 1220
Score = 100 (40.3 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 121 ECREVLE---TLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
EC V++ L + PF PVD +P Y +V P DL TI++ L Y
Sbjct: 1144 ECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIKQRLENRFYRRISA 1203
Query: 178 FVKDVKRVFHNSRNYNQ 194
+ +V+ + HN+R +N+
Sbjct: 1204 LMWEVRYIEHNARTFNE 1220
Score = 50 (22.7 bits), Expect = 3.6e-248, Sum P(3) = 3.6e-248
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVK 1136
W + G+NL+PPKR R K
Sbjct: 858 WTADAGINLQPPKRQTRQATQK 879
Score = 45 (20.9 bits), Expect = 2.5e-149, Sum P(2) = 2.5e-149
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
+S S S+EDE + E P + QSE S D++SE S+ D
Sbjct: 817 DSDSSSEEDETVGTSDASAEDPVVEW----------QSESSSSDSSSEYSDWTAD 861
>UNIPROTKB|F1N1C9 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00700000104382 OMA:MTGNNLP InterPro:IPR011044
SUPFAM:SSF50969 EMBL:DAAA02072255 IPI:IPI00686367
Ensembl:ENSBTAT00000021597 Uniprot:F1N1C9
Length = 1658
Score = 1233 (439.1 bits), Expect = 6.0e-247, Sum P(5) = 6.0e-247
Identities = 255/519 (49%), Positives = 339/519 (65%)
Query: 440 VNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLL 499
VN+ +R+ +G S + S Y +++ H LGHLS+V+CV FD+ G I TG+DD L
Sbjct: 1 VNITSARQLTGCSRFSHIFPSAAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCL 60
Query: 500 IKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGH 559
+K+W DG+LLATLRG S EISD+A++ N L+AAG+ DK +R+W L+T AP++VL GH
Sbjct: 61 VKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGH 120
Query: 560 QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV-FHE-PVMFNERIRPG 617
IT + FCP YL ST DG I FW++ + KT+ F + PV F ER RPG
Sbjct: 121 SASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHV-----KTMKFKDRPVKFTERSRPG 175
Query: 618 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS--H 675
I CSSFS GG+F+ TGS DH +R+Y + G + P I E+E H+DKV ++Q+ ++
Sbjct: 176 -VQISCSSFSSGGMFITTGSTDHVIRIYYL-GSEIPEKIAELESHTDKVVAVQFCNNGDS 233
Query: 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN-KKIKVTMVAWDASDR 734
LRFVSGSRDGTA IW Y+ +W+ I LDM T + S E K+KVTMVAWD D
Sbjct: 234 LRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLPSGEDKVTKLKVTMVAWDRYDT 293
Query: 735 WVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
VITA+N NF +K+W++ G L+ L GH +EVFVLE+HPFD R++LSAGHDG I +WD+
Sbjct: 294 TVITAVN-NFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFVWDL 352
Query: 795 -LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIP 853
+K R Y N++EGQG GA+FD K+SPDG A TDS+GHLL++G G K + IP
Sbjct: 353 DRGTKIRNY---FNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIP 409
Query: 854 RELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEVQRLVPGREN 913
++FFHTDYR L R + DE T PHLMPPPFLVD++G P+P + QRLVPGREN
Sbjct: 410 DQMFFHTDYRPLIRDANNY--VLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGREN 467
Query: 914 ADDTELLPDI--TTNDDGHV-EIVEGSERNGERPVEVEG 949
D +L+P + N DG V E V G + N + ++G
Sbjct: 468 CKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDG 506
Score = 940 (336.0 bits), Expect = 6.0e-247, Sum P(5) = 6.0e-247
Identities = 196/498 (39%), Positives = 281/498 (56%)
Query: 1124 EPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFFK 1183
E K+ ++ K K VS+ + P E + + P W+ + +P+++P+ PQMGDE+++F+
Sbjct: 752 ERQKKPKQTRKKKGGLVSMAGE--PNE--EWFAPQ-WILDTIPRRSPFVPQMGDELIYFR 806
Query: 1184 QGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVMK 1243
QG++ YV AVR Y ++ L+ PW + L+E E VK+VGIKYEI PP +CCLKLA +
Sbjct: 807 QGHEAYVRAVRKSKTYSVN-LQKQPWNKMDLREQEFVKIVGIKYEIGPPTLCCLKLAFLD 865
Query: 1244 P-NGKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIEG 1302
P +GK+T E F+IKYHDMPDVIDF VL Q Y A R W +GDRF S+IDDAWW+GT+E
Sbjct: 866 PISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVES 925
Query: 1303 K----PSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKE-ATEPGGSLPVEPEEIQEL 1357
+ P S F Y + WDNNERE +SPWD+EP EG E G +PV EE+ L
Sbjct: 926 QQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTAL 985
Query: 1358 LYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLT 1417
LY P+ EW RD CE++I G+ ++ L A PF VPVD+S DL
Sbjct: 986 LYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLN 1045
Query: 1418 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVD 1477
T+R R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I + + D
Sbjct: 1046 TIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTD 1105
Query: 1478 VPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNEC 1537
+ Y+++ ++ R + Q P W+ +C
Sbjct: 1106 ILDTYNKIKAEELNSTDAEEDTEMVDLDSDGPGTSSGRRVKCRGRRQSLRFNPDAWRKQC 1165
Query: 1538 REVLETLWVCPDSEPFRKPVDKLDHPDY--------DKIVIAPMDLGTIREELRGDNYES 1589
+E+L ++ DSEPFR+P D L +P + + ++ ++ E+ D ++
Sbjct: 1166 KELLGLIYEREDSEPFRQPSDPLSYPGHQEHEGESSESVIPGQQQDSSLCEDYH-DVIDT 1224
Query: 1590 PIDFVKDVKRVFHNSRNY 1607
P+DF VK NY
Sbjct: 1225 PMDF-STVKETLETG-NY 1240
Score = 241 (89.9 bits), Expect = 6.0e-27, Sum P(3) = 6.0e-27
Identities = 60/200 (30%), Positives = 97/200 (48%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+R R +NRFYRRI++ ++VRY+ NA FNEP S IVK A+I+TD+LLR I + +
Sbjct: 1044 LNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSC 1103
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
D+ Y+++ ++ R + Q P W+
Sbjct: 1104 TDILDTYNKIKAEELNSTDAEEDTEMVDLDSDGPGTSSGRRVKCRGRRQSLRFNPDAWRK 1163
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHPDY--------DKIVIAPMDLGTIREELRGDNY 172
+C+E+L ++ DSEPFR+P D L +P + + ++ ++ E+ D
Sbjct: 1164 QCKELLGLIYEREDSEPFRQPSDPLSYPGHQEHEGESSESVIPGQQQDSSLCEDYH-DVI 1222
Query: 173 ESPIDFVKDVKRVFHNSRNY 192
++P+DF VK NY
Sbjct: 1223 DTPMDF-STVKETLETG-NY 1240
Score = 183 (69.5 bits), Expect = 6.0e-247, Sum P(5) = 6.0e-247
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 1564 DYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLS 1623
DY ++ PMD T++E L NY SP++F KDV+++F NS+ Y NK+S+IY MT RLS
Sbjct: 1217 DYHDVIDTPMDFSTVKETLETGNYGSPLEFYKDVRQIFSNSKAYTSNKKSRIYSMTLRLS 1276
Query: 1624 EFAEEHLRRLTVRWNSHKNKENKK 1647
E ++ + + S + ++
Sbjct: 1277 ALFESRIKNIISEYKSAIQSQKRR 1300
Score = 183 (69.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 149 DYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLS 208
DY ++ PMD T++E L NY SP++F KDV+++F NS+ Y NK+S+IY MT RLS
Sbjct: 1217 DYHDVIDTPMDFSTVKETLETGNYGSPLEFYKDVRQIFSNSKAYTSNKKSRIYSMTLRLS 1276
Query: 209 EFAEEHLRRLTVRWNSHKNKENKK 232
E ++ + + S + ++
Sbjct: 1277 ALFESRIKNIISEYKSAIQSQKRR 1300
Score = 100 (40.3 bits), Expect = 2.4e-140, Sum P(4) = 2.4e-140
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 1536 ECREVLETL--WVCPD-SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 1592
EC V++ + + D + PF PVD +P Y +V P DL TIR L Y
Sbjct: 1002 ECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISA 1061
Query: 1593 FVKDVKRVFHNSRNYNQ 1609
+ +V+ + HN+R +N+
Sbjct: 1062 LMWEVRYIEHNARTFNE 1078
Score = 100 (40.3 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 121 ECREVLETL--WVCPD-SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
EC V++ + + D + PF PVD +P Y +V P DL TIR L Y
Sbjct: 1002 ECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISA 1061
Query: 178 FVKDVKRVFHNSRNYNQ 194
+ +V+ + HN+R +N+
Sbjct: 1062 LMWEVRYIEHNARTFNE 1078
Score = 50 (22.7 bits), Expect = 6.0e-247, Sum P(5) = 6.0e-247
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVK 1136
W + G+NL+PPKR R K
Sbjct: 716 WTADAGINLQPPKRQTRQATQK 737
Score = 49 (22.3 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1780 EESASESQEDENSIPETDTT-EQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
E+S S S+EDE ++ +D + E P + QSE S D++SE S+ D
Sbjct: 674 EDSDSSSEEDE-TVGTSDASIEDPVIEW----------QSESSSSDSSSEYSDWTAD 719
Score = 37 (18.1 bits), Expect = 6.0e-247, Sum P(5) = 6.0e-247
Identities = 13/63 (20%), Positives = 22/63 (34%)
Query: 1641 KNKENKKDSXXXXXXXXXXXXXXXXXXXTLVESDDEVLSRKRRGKSTYENDFDFNPAGET 1700
+ KE K+ S +SD E S R + + D D++ +T
Sbjct: 1447 EKKETKEKSHLSSSESGELESSLSSESTCGSDSDSE--STSRTDQDYVDGDHDYSKFIQT 1504
Query: 1701 KTK 1703
+ K
Sbjct: 1505 RPK 1507
Score = 37 (18.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 13/63 (20%), Positives = 22/63 (34%)
Query: 226 KNKENKKDSXXXXXXXXXXXXXXXXXXXTLVESDDEVLSRKRRGKSTYENDFDFNPAGET 285
+ KE K+ S +SD E S R + + D D++ +T
Sbjct: 1447 EKKETKEKSHLSSSESGELESSLSSESTCGSDSDSE--STSRTDQDYVDGDHDYSKFIQT 1504
Query: 286 KTK 288
+ K
Sbjct: 1505 RPK 1507
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 1240 (441.6 bits), Expect = 1.4e-241, Sum P(3) = 1.4e-241
Identities = 274/623 (43%), Positives = 368/623 (59%)
Query: 369 LPKICQRLGPLLDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQH-GTS 427
L +IC RLGPLL++E+ + P KS K V+ +A H G
Sbjct: 12 LLQICHRLGPLLEQEIPQSVPGVQTLLGAGRQSLLRTNKS-CKHVVWKGSALAALHCGRP 70
Query: 428 LLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDK 486
P N + + L SR+ +G ++ + Y +++ H LGHLS+V+CV FD+
Sbjct: 71 PESPINYGSPPSIADTLFSRKLNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDR 130
Query: 487 LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546
G I TG+DD L+K+W DG+LLATLRG + EISD+A++ N ++AAG+ DK IR+W
Sbjct: 131 TGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWC 190
Query: 547 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606
L+T AP++VL GH IT + F PL YL+ST DG I FW + D K +
Sbjct: 191 LRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLW--DAGTLK-INPR 247
Query: 607 PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKV 666
P F ER RPG ++CSSFS GG+FLATGS DH +RVY G P I E+E H+DKV
Sbjct: 248 PAKFTERPRPG-VQMICSSFSAGGMFLATGSTDHIIRVYFF-GSGQPEKISELEFHTDKV 305
Query: 667 DSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK--KIKV 724
DSIQ+S++ RFVSGSRDGTA IW +K +W+ I LDM T P + +K K+KV
Sbjct: 306 DSIQFSNTSNRFVSGSRDGTARIWQFKRREWKSILLDMAT-RPAGQNLQGIEDKITKMKV 364
Query: 725 TMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG 784
TMVAWD D VITA+N N +K+W+++ G L+ VL GH +EVFVLE HPFD RVL SAG
Sbjct: 365 TMVAWDRHDNTVITAVN-NMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAG 423
Query: 785 HDGLIIIWDILSS-KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
HDG +I+WD+ K R Y F N++EGQG GA+FD K SPDG A TDS+GHLL++G
Sbjct: 424 HDGNVIVWDLARGVKIRSY--F-NMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGF 480
Query: 844 GGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPE 903
G + I ++FFH+DYR L R F DE T PHLMPPPFLVD++G P+P
Sbjct: 481 GSSSKYDKIADQMFFHSDYRPLIRDANNF--VLDEQTQQAPHLMPPPFLVDVDGNPHPSR 538
Query: 904 VQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQT 963
QRLVPGREN + +L+P + G +++ P++ QR +
Sbjct: 539 YQRLVPGRENCREEQLIPQMGVTSSGLNQVLSQQANQDISPLDSMIQRLQQEQDLRRSGE 598
Query: 964 SHVHVLRSRANGESSAATEGTSP 986
+ + + G +S+ +E SP
Sbjct: 599 AAISNTSRLSRGSTSSTSEVHSP 621
Score = 1082 (385.9 bits), Expect = 1.4e-241, Sum P(3) = 1.4e-241
Identities = 216/522 (41%), Positives = 313/522 (59%)
Query: 1123 LEPPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 1180
+ P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV
Sbjct: 847 VSPKKKKPKERKQKRLAVGELTENGLTLEE----WLPSTWITDTLPRRCPFVPQMGDEVY 902
Query: 1181 FFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLA 1240
+F+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA
Sbjct: 903 YFRQGHEAYVEMARKNKIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLA 961
Query: 1241 VMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGT 1299
+ P+ GKLT F +KYHDMPDVIDF VLRQ +E A R WN+GDRF S+IDDAWW+GT
Sbjct: 962 FLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFEDAKYRRWNIGDRFRSVIDDAWWFGT 1021
Query: 1300 IEGK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEI 1354
IE + P S F Y + WDN + E +SPWD+E P E G S+P+ E
Sbjct: 1022 IESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDVET 1081
Query: 1355 QELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX 1414
+ L+Y P EW RD CE+I+TG+ ++M L +A F+ PVD+
Sbjct: 1082 RSLIYKPLDGEWGSNPRDEECERIVTGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPT 1141
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL+T++ R +NRFYRR++S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 1142 DLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQT 1201
Query: 1475 PVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLK---RPF 1531
++ +Y+ + + P TR +++ +++L+ + +
Sbjct: 1202 CYNIIPLYNSMKKKVLSDSEEEEKEDADV-------PGTSTRKRKDHQPRRRLRNRAQSY 1254
Query: 1532 N---WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYE 1588
+ WK +C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYE
Sbjct: 1255 DIQAWKKQCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYE 1314
Query: 1589 SPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
SP++ KDV+ +F NS+ Y +KRS+IY M+ RLS F EEH+
Sbjct: 1315 SPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 1356
Score = 434 (157.8 bits), Expect = 5.1e-34, Sum P(3) = 5.1e-34
Identities = 87/221 (39%), Positives = 134/221 (60%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L+T++ R +NRFYRR++S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 1143 LSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTC 1202
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLK---RPFN 117
++ +Y+ + + P TR +++ +++L+ + ++
Sbjct: 1203 YNIIPLYNSMKKKVLSDSEEEEKEDADV-------PGTSTRKRKDHQPRRRLRNRAQSYD 1255
Query: 118 ---WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYES 174
WK +C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYES
Sbjct: 1256 IQAWKKQCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYES 1315
Query: 175 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 215
P++ KDV+ +F NS+ Y +KRS+IY M+ RLS F EEH+
Sbjct: 1316 PMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 1356
Score = 57 (25.1 bits), Expect = 1.4e-241, Sum P(3) = 1.4e-241
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1116 WIHE-GVNLEPPKRVRRHTKVKPIQVS 1141
W + G+NL+PPK++ +H K K + S
Sbjct: 792 WTADAGINLQPPKKIPKH-KTKKAESS 817
Score = 52 (23.4 bits), Expect = 7.8e-129, Sum P(2) = 7.8e-129
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQD 1835
EE+ S+E EN +D E A + R S+ S D +S+ S+ D
Sbjct: 740 EETPRPSEEIENGTSSSDEGEVVAVSGGTSEEEERAWHSDGSSSDYSSDYSDWTAD 795
Score = 50 (22.7 bits), Expect = 1.0e-132, Sum P(3) = 1.0e-132
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 1554 RKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDF---VKDVKRVFHNSRNYNQN 1610
RKP K+ D +I P + +R R + P+D +++K + R NQ
Sbjct: 1652 RKPKRKMKTQKLDSDLIVPTSVKMLRRSNRKKT-DDPMDEEEEFEELKGSEPHMRTRNQG 1710
Query: 1611 KRSKIY 1616
+R+ Y
Sbjct: 1711 RRTAFY 1716
Score = 49 (22.3 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 24/94 (25%), Positives = 35/94 (37%)
Query: 1749 EQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESA--SESQEDENSIPETDTTE------ 1800
E P PS +S+ EE A S+ + S +D T
Sbjct: 741 ETPRPSEEIENGTSSSDEGEVVAVSGGTSEEEERAWHSDGSSSDYSSDYSDWTADAGINL 800
Query: 1801 QPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQ 1834
QP KK+ PK + +++E S D E + KQ
Sbjct: 801 QPPKKI----PKHKTKKAESSS-DEEEESEKQKQ 829
Score = 41 (19.5 bits), Expect = 5.1e-34, Sum P(3) = 5.1e-34
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 408 SLAKSVLSSYDYIARQHGTSLLVPNSVKVHNTVNVLRS 445
S AK+ +S + A G ++L NSVK T+N L S
Sbjct: 1463 SAAKTFISKANTSAMP-GKTVL-ENSVKHSKTLNTLSS 1498
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 1204 (428.9 bits), Expect = 8.7e-230, Sum P(4) = 8.7e-230
Identities = 243/494 (49%), Positives = 328/494 (66%)
Query: 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA 525
++ H LGHLSAV+C+ FD+ G I TG+DD L+K+W + DG+L +TLRG EISD+A
Sbjct: 1 MKMHRRILGHLSAVYCIAFDRTGSRIFTGSDDALVKIWSSFDGRLHSTLRGHYAEISDLA 60
Query: 526 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
++ N L+AAG+ DKTIR+W L+T AP++VL GH G IT + F P Y+ ST TD
Sbjct: 61 VNFENTLIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFVKGSKRYMVSTGTD 120
Query: 586 GCIGFWKYKLDIDISKTVFHEPV-MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644
+ FW++ D++ F + F ER RPG +CSSFSPGG+FLATGS D +R+
Sbjct: 121 ATVCFWQW----DVNNNEFSDRQHKFTERPRPG-VQTVCSSFSPGGMFLATGSTDDVIRI 175
Query: 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW-YYKCSQWRFIRLD 703
Y + G SP + E++ H+DKVDSIQ+ HS RFVSGSRDGTA IW ++ QW+ + LD
Sbjct: 176 YYL-GSGSPEKLAELDSHTDKVDSIQFCHSGERFVSGSRDGTARIWRLHQRHQWKSVLLD 234
Query: 704 MNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
M+ LP + +D+ N K KVTMV+WD D VITA+N N +K+W+++ G L+ VLKG
Sbjct: 235 MSATLPGSAPLTDDENFFKPKVTMVSWDRHDNTVITAVN-NHLLKVWNSYTGQLLHVLKG 293
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH--NIVEGQGEGALFDG 820
H EVFVLE HP+D R++LSAGHDG + +WD++ +G K H N++EGQG GA+FD
Sbjct: 294 HEAEVFVLEPHPYDPRIMLSAGHDGNVFVWDLI----KGTKTMHYFNMIEGQGHGAVFDC 349
Query: 821 KWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVT 880
K++PDG A+TDS+GHL+++G G K + +P ++FFHTDYR L R F DE T
Sbjct: 350 KFTPDGHRFAMTDSHGHLVIFGFGSSKPYEKLPDQVFFHTDYRPLIRDTNGF--VLDEQT 407
Query: 881 NLPPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDTELLPDI--TTNDDGHVEIVEGSE 938
PHLMPPPFLVD++G P+PP QRLVPGREN D L+P + DG E+VE +
Sbjct: 408 QQAPHLMPPPFLVDVDGNPHPPRFQRLVPGRENIADEHLVPQLGYVATSDG--EVVE--Q 463
Query: 939 RNGERPVEVEGQRH 952
++ E E RH
Sbjct: 464 VISQQSAESEEVRH 477
Score = 1070 (381.7 bits), Expect = 8.7e-230, Sum P(4) = 8.7e-230
Identities = 213/523 (40%), Positives = 316/523 (60%)
Query: 1121 VNLEPPKRVRRHTKVKPI--QVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDE 1178
V E R+H K K + S P+ I E+ + ++P W+ +VVP+K+P+ PQMGDE
Sbjct: 736 VGEEETSSPRKHKKAKSKTPKHSKPRPSINREISNEFRPPAWITDVVPRKSPFVPQMGDE 795
Query: 1179 VMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLK 1238
V++F+QG++ YVDAV +Y ++ L PW + L++ E VK+ GIKYE+ PP +CCLK
Sbjct: 796 VIYFRQGHEAYVDAVCRMNLYPIN-LDKQPWKKMQLRDQEFVKITGIKYEVCPPTLCCLK 854
Query: 1239 LAVMKPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWW 1297
L + P GK+T+ F+IKYHDM DVIDF VLRQ Y+ A R W DRF S+IDDAWW+
Sbjct: 855 LTQIDPGTGKITDRTFSIKYHDMADVIDFLVLRQSYDEARNRVWTSNDRFRSVIDDAWWF 914
Query: 1298 GTIE-GKPSPTKSP---FLGYKILWDNNERENLSPWDLEPPKEGKEATEPGGS-LPVEPE 1352
G I +P ++ P F +K+ WDN E E LSPWD+E E E E + +PV E
Sbjct: 915 GAIVCHEPYQSEYPDSHFQCFKVKWDNGETEKLSPWDVEAIPENAEQPESASAGVPVTDE 974
Query: 1353 EIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXX 1412
E+ ++LY P+ EW R+ +II G+E++M + + PF PVD++Q
Sbjct: 975 EMMDILYKPQRGEWGDRGREQESARIIAGIEQLMTVDITAPFSGPVDLTQYPTYCTVIAY 1034
Query: 1413 XXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
DL T++ R ++ FYRR+++ +DV+++ NA+ FNEP S I + A+IIT++L++ I +
Sbjct: 1035 PTDLNTIKLRLKHNFYRRLSALIWDVKHIEQNAKTFNEPRSKIAQSAKIITNVLIKFISK 1094
Query: 1473 PNPVDVPVVYHELLQ-NYXXXXXXXXXXXXXXXRQRRVR-PTAVTRAQREAMNQKKLKRP 1530
+ D+ +Y+ + Y +R+R P+ R+A
Sbjct: 1095 LHCTDIMEIYNAVENMEYSDDEEMDDIDAPGTSAGQRLRQPSVEVVLDRDA--------- 1145
Query: 1531 FNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESP 1590
WK+ C+ +L+ ++ C DSEPFR PVD+ D+PDY I+ PMDLGT+R+ L D YE+P
Sbjct: 1146 --WKDHCKRLLDYMFECEDSEPFRDPVDQSDYPDYTNIIDTPMDLGTVRQTLEEDRYENP 1203
Query: 1591 IDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
ID KD++ +F N++ Y NKRSKIY MT RLS F EE++R++
Sbjct: 1204 IDVCKDIRLIFANAKAYTPNKRSKIYSMTLRLSAFFEENIRKI 1246
Score = 424 (154.3 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 85/220 (38%), Positives = 134/220 (60%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R ++ FYRR+++ +DV+++ NA+ FNEP S I + A+IIT++L++ I + +
Sbjct: 1038 LNTIKLRLKHNFYRRLSALIWDVKHIEQNAKTFNEPRSKIAQSAKIITNVLIKFISKLHC 1097
Query: 61 VDVPVVYHELLQ-NYXXXXXXXXXXXXXXXRQRRVR-PTAVTRAQREAMNQKKLKRPFNW 118
D+ +Y+ + Y +R+R P+ R+A W
Sbjct: 1098 TDIMEIYNAVENMEYSDDEEMDDIDAPGTSAGQRLRQPSVEVVLDRDA-----------W 1146
Query: 119 KNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDF 178
K+ C+ +L+ ++ C DSEPFR PVD+ D+PDY I+ PMDLGT+R+ L D YE+PID
Sbjct: 1147 KDHCKRLLDYMFECEDSEPFRDPVDQSDYPDYTNIIDTPMDLGTVRQTLEEDRYENPIDV 1206
Query: 179 VKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
KD++ +F N++ Y NKRSKIY MT RLS F EE++R++
Sbjct: 1207 CKDIRLIFANAKAYTPNKRSKIYSMTLRLSAFFEENIRKI 1246
Score = 80 (33.2 bits), Expect = 9.7e-108, Sum P(5) = 9.7e-108
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 463 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS 522
+S LR HY + L+ V F+ +I G+ D I++W R +A L+G SG I+
Sbjct: 46 HSTLRGHYAEISDLA----VNFENT--LIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSIT 99
Query: 523 DIAID-----NRNILLAAGTVDKTIRIW 545
+ ++ +++ GT D T+ W
Sbjct: 100 SLQFSPFVKGSKRYMVSTGT-DATVCFW 126
Score = 52 (23.4 bits), Expect = 8.7e-230, Sum P(4) = 8.7e-230
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 1784 SESQEDENSIPETDTTEQPAKKLKVLYPKRRGQ-QSEDGSGDNASEM-SELKQDPLS 1838
SES + E ++ KL + +RR Q +S+ GS DN S SE + S
Sbjct: 1890 SESDFETRCKSENGRAQRSQGKLPTVSRQRRKQSESDKGSNDNGSNFESEESESEAS 1946
Score = 44 (20.5 bits), Expect = 8.7e-230, Sum P(4) = 8.7e-230
Identities = 14/45 (31%), Positives = 16/45 (35%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDEN 1791
D E G ST P S EE A+ SQE+ N
Sbjct: 1453 DDEGGGGST---RPATRASKRSAVIQSSSDSDDEEEAAASQEESN 1494
Score = 43 (20.2 bits), Expect = 3.3e-228, Sum P(3) = 3.3e-228
Identities = 25/98 (25%), Positives = 39/98 (39%)
Query: 1754 STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTT-------EQPAKKL 1806
S S E A+ S E+SA + D +S + ++ +PA+K
Sbjct: 1478 SDSDDEEEAAASQEESNESGSSASEGEKSAGSADSDSSSHSKKNSRTAGRRPCRRPAEK- 1536
Query: 1807 KVLYP-------KRRGQQSEDGSGDNAS--EMSELKQD 1835
K P KR+ ++S+D S D S E L+ D
Sbjct: 1537 KETSPLTNGHGTKRQWEESDDNSEDGGSPIESENLESD 1574
Score = 42 (19.8 bits), Expect = 4.3e-228, Sum P(3) = 4.3e-228
Identities = 12/52 (23%), Positives = 19/52 (36%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSE 1831
EE+ S+ D+ +P+ A+K K+ D D SE
Sbjct: 1713 EENQSDDA-DQRRVPKNRNRSSNARKQKLCASSDESSSESDEKADRGRIKSE 1763
Score = 41 (19.5 bits), Expect = 5.4e-228, Sum P(3) = 5.4e-228
Identities = 19/88 (21%), Positives = 29/88 (32%)
Query: 1752 GPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDE--NSIPETDTTEQPAKKLKVL 1809
GP A T ++S S+S ED+ +S E A + K
Sbjct: 1310 GPERRRAHEAKETFRRSSSSSSGSDQDSKQSLSQSDEDDEHSSSSRAMRRETRATRKKAA 1369
Query: 1810 YPK-RRGQQSEDGSGDNASEMSELKQDP 1836
K + ++ E N S +Q P
Sbjct: 1370 QNKGAKSRRPESHVKMNGRSRSHERQKP 1397
Score = 39 (18.8 bits), Expect = 1.1e-227, Sum P(4) = 1.1e-227
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 1670 LVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAESGNEQVEEVK 1715
L E+ + R ++ + +++ DF ET+ K+E+G Q + K
Sbjct: 1870 LAEAQRKSAKRFKQLMGSTDSESDF----ETRCKSENGRAQRSQGK 1911
Score = 39 (18.8 bits), Expect = 9.7e-108, Sum P(5) = 9.7e-108
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 963 TSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKNFVK 1000
T+ + L R +S + G+AP ++NF K
Sbjct: 216 TARIWRLHQRHQWKSVLLDMSATLPGSAPLTDDENFFK 253
Score = 38 (18.4 bits), Expect = 3.3e-121, Sum P(4) = 3.3e-121
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 1623 SEFAEEHLRRLTVRWNSHKNKE 1644
SE+ + H + V+W++ + ++
Sbjct: 925 SEYPDSHFQCFKVKWDNGETEK 946
Score = 38 (18.4 bits), Expect = 2.5e-120, Sum P(3) = 2.5e-120
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 970 RSRANGESSAATEGTSPSGTAPTAQNKNFVK 1000
+ +N S+A+EG +G+A + + + K
Sbjct: 1490 QEESNESGSSASEGEKSAGSADSDSSSHSKK 1520
Score = 37 (18.1 bits), Expect = 1.1e-227, Sum P(4) = 1.1e-227
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGS 1822
+ + + D S E++ +E A PKRR + + G+
Sbjct: 1922 QSESDKGSNDNGSNFESEESESEASSGSRSSPKRRLRDRDRGT 1964
Score = 37 (18.1 bits), Expect = 6.8e-119, Sum P(2) = 6.8e-119
Identities = 11/52 (21%), Positives = 18/52 (34%)
Query: 1754 STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETD--TTEQPA 1803
S+ Y++ A +S +EDE E + E+PA
Sbjct: 684 SSDYSDWTADAGISVRTSDSSRRRTTRRISSSEEEDEEDDEEEEEPADEEPA 735
>RGD|1564964 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10116 "Rattus norvegicus" [GO:0001932 "regulation of
protein phosphorylation" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA;ISO] [GO:0010800 "positive
regulation of peptidyl-threonine phosphorylation" evidence=IEA;ISO]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA;ISO]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IEA;ISO] [GO:0040008 "regulation of
growth" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO] [GO:0043568 "positive
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO] [GO:0045840 "positive regulation of mitosis"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA;ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1564964 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 GO:GO:0008284 GO:GO:0045944 GO:GO:0010800
GO:GO:0006606 GO:GO:0040008 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 IPI:IPI00911360
Ensembl:ENSRNOT00000011864 Uniprot:F1M3B3
Length = 1196
Score = 1069 (381.4 bits), Expect = 2.7e-110, Sum P(2) = 2.7e-110
Identities = 214/514 (41%), Positives = 303/514 (58%)
Query: 1125 PPKRVRRHTKVKPIQVS-LPKQ-LIPEEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVMFF 1182
P K+ + K K + V L + L EE + PS W+ + +P++ P+ PQMGDEV +F
Sbjct: 286 PKKKKPKERKQKRLAVGELTENGLTLEE----WLPSAWITDTLPRRCPFVPQMGDEVYYF 341
Query: 1183 KQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPRMCCLKLAVM 1242
+QG++ YV+ R IY ++ + PW + L+E EL+K+VGIKYE+ P +CCLKLA +
Sbjct: 342 RQGHEAYVEMARKNRIYSINP-KKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFL 400
Query: 1243 KPN-GKLTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDAWWWGTIE 1301
P+ GKLT F +KYHDMPDVIDF VLRQ ++ A R WN+GDRF S+IDDAWW+GTIE
Sbjct: 401 DPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFRSVIDDAWWFGTIE 460
Query: 1302 GK----PSPTKSPFLGYKILWDNNERENLSPWDLEP-PKEGKEATEPGGSLPVEPEEIQE 1356
+ P S F Y + WDN + E +SPWD+E P E G S+P+ E +
Sbjct: 461 SQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDVECRS 520
Query: 1357 LLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDL 1416
L+Y P EW RD CE+I+ G+ ++M L +A F+ PVD+ DL
Sbjct: 521 LIYKPLDGEWGANPRDEECERIVGGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPTDL 580
Query: 1417 TTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPV 1476
+T++ R +NRFYRR +S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 581 STIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCY 640
Query: 1477 DVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKNE 1536
++ +Y+ + + R R R R N+ + W+ +
Sbjct: 641 NIIPLYNSMKKKVLSDSEEEEKDADVPGTSTRKRKDHQPR--RRLRNRAQSYDIQAWRKQ 698
Query: 1537 CREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKD 1596
C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYESP++ KD
Sbjct: 699 CQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKD 758
Query: 1597 VKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
V+ +F NS+ Y +KRS+IY M+ RLS F EEH+
Sbjct: 759 VRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 792
Score = 434 (157.8 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 87/215 (40%), Positives = 126/215 (58%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L+T++ R +NRFYRR +S ++VRY+ N FNEP S IVK A+ +TDLLL IK+
Sbjct: 580 LSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTC 639
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLKRPFNWKN 120
++ +Y+ + + R R R R N+ + W+
Sbjct: 640 YNIIPLYNSMKKKVLSDSEEEEKDADVPGTSTRKRKDHQPR--RRLRNRAQSYDIQAWRK 697
Query: 121 ECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK 180
+C+E+L ++ C DSEPFR+PVD L++PDY I+ PMD T+RE L NYESP++ K
Sbjct: 698 QCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCK 757
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 215
DV+ +F NS+ Y +KRS+IY M+ RLS F EEH+
Sbjct: 758 DVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 792
Score = 56 (24.8 bits), Expect = 2.7e-110, Sum P(2) = 2.7e-110
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1116 WIHE-GVNLEPPKRVRRH-TK 1134
W + G+NL+PPK+V +H TK
Sbjct: 229 WTADAGINLQPPKKVPKHKTK 249
Score = 56 (24.8 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 1554 RKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDF---VKDVKRVFHNSRNYNQN 1610
RKP K+ + D +I P ++ +R R + PID +++K + R NQ
Sbjct: 1089 RKPKRKMKTQNLDSELIVPTNVKILRRSNR-KKADDPIDEEEEFEELKGSEPHMRTRNQG 1147
Query: 1611 KRSKIY 1616
+R+ Y
Sbjct: 1148 RRTAFY 1153
Score = 40 (19.1 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 408 SLAKSVLSSYDYIARQHGT 426
S A S LSS D + HGT
Sbjct: 926 SKALSTLSSPDQLTFSHGT 944
Score = 38 (18.4 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 848 RPQNIPRELFFHTDYRTLNRPN 869
+ QN+ EL T+ + L R N
Sbjct: 1096 KTQNLDSELIVPTNVKILRRSN 1117
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 317 (116.6 bits), Expect = 1.1e-63, Sum P(5) = 1.1e-63
Identities = 76/243 (31%), Positives = 121/243 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH +AV+C +FD+ G ++TG+DD L+K+W LA+ RG G+I+D+A+ + N L+
Sbjct: 234 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALV 293
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+ + D IR+W L PISVL GH G +T + F P + + + L+S S DG W
Sbjct: 294 ASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSS-SDDGTCRIWDA 352
Query: 594 KLDIDISKTVFHEPVMFN--ERIRPGNAH-ILCSSFSPGGLFLATGSGDHHVRVYK---- 646
+ + + P N +H ILC +++ G TGS D + RV+
Sbjct: 353 RYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSASKP 412
Query: 647 -MDGVDSPLGILEV-EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 704
+D + P L+V H + V+ +Q+S + S + D Y K F ++
Sbjct: 413 NLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPKSSTADALKEDSYPKFKNSWFCHDNI 472
Query: 705 NTC 707
TC
Sbjct: 473 VTC 475
Score = 267 (99.0 bits), Expect = 1.1e-63, Sum P(5) = 1.1e-63
Identities = 82/252 (32%), Positives = 119/252 (47%)
Query: 675 HLRFVSGSRDGTALIW-------YYKCSQW-RFIRLDMNTC-LPHTKETSDETNKKIK-- 723
H V+ SRDG+A+IW + K +W + L + LP + +
Sbjct: 469 HDNIVTCSRDGSAIIWTPRSRKFHGKSGRWMKGYHLKVPPPPLPPQPPRGGPRQRFLPTP 528
Query: 724 --VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 781
V M+ W +R+V+ AI + +I +W+A +G LV L GH+ +VL+ HPF+ R+ +
Sbjct: 529 RGVNMIIWSLDNRFVLAAI-MDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAM 587
Query: 782 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 841
SAG+DG IIWDI ++ V G L DGK+S DGT+ L+D G +
Sbjct: 588 SAGYDGKTIIWDI-------WEGIPIKVYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYFL 640
Query: 842 GLGGFKRPQNIPRELFFHTDYRTLNRP-NGLFEPTYDEVTNLPPHLMP-PPFLVDLNGTP 899
G + +N + FF DYR L R NG D+ T L PH L D + P
Sbjct: 641 NTGQGESQKNAKYDQFFLGDYRPLIRDTNG---HVLDQETQLLPHRRNLQDLLCDSSMIP 697
Query: 900 YPPEVQRLVPGR 911
YP Q + R
Sbjct: 698 YPEPDQTMFQQR 709
Score = 186 (70.5 bits), Expect = 1.1e-63, Sum P(5) = 1.1e-63
Identities = 58/235 (24%), Positives = 109/235 (46%)
Query: 1117 IHEGVNLEP-PKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKA-PYYPQ 1174
+++ +LE P + ++ + VS P + + WL ++ Y PQ
Sbjct: 1176 VYDDASLEEWPSTSKAGSRSRSASVSKPSLHTGIRLNSVSGKISWLLLSEHEEGCRYIPQ 1235
Query: 1175 MGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPR- 1233
+GDEV++FKQG+Q+++ ++K + + R R P L E+ KV + Y+ P
Sbjct: 1236 LGDEVIYFKQGHQEFL---KTKELNDRDRSRYLPRN---LGAVEICKVEKLNYDTYPGSG 1289
Query: 1234 -MCC-LKLAVMKPNGK-LTNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGD----- 1285
CC + L V+ + + + F + ++ + DF V + Y+ AI W +G+
Sbjct: 1290 DSCCKMTLRVLDSSSSHASRKEFQLTLPELINFPDFIVEKTRYDAAIQTNWKIGNECRVW 1349
Query: 1286 -RFCSMIDDAWWWGTIEGKPSPT----KSPFLGYKILWDNNERENLSPWDLEPPK 1335
R + AWW G IE + +SP+ Y+++++ E SPW+ + P+
Sbjct: 1350 WRDATGEGGAWWEGRIESSQVKSTDFPESPWERYRVVYETGETSLHSPWEFDNPE 1404
Score = 115 (45.5 bits), Expect = 6.5e-20, Sum P(4) = 6.5e-20
Identities = 58/253 (22%), Positives = 111/253 (43%)
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+IL A + K + +Q + I L GH+ + +C + Y+ + S D +
Sbjct: 208 SILSACHAIAKPSTM--VQKMQNIKKLRGHRNAV----YCAIFDRSGRYVITGSDDRLVK 261
Query: 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM-D 648
W + + ++ HE + + + NA +A+ S D +RV+++ D
Sbjct: 262 IWSMETALCLASCRGHEGDITDLAVSSNNA------------LVASASNDFVIRVWRLPD 309
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSH---SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705
G+ P+ +L H+ V +I +S S + +S S DGT IW + SQW R+ +
Sbjct: 310 GM--PISVLR--GHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQW-LPRIYVP 364
Query: 706 TCLPHTKETSDETN--KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL------- 756
+ P T +N + ++ A++A+ +T + + ++W A +L
Sbjct: 365 S--PSDANTGSTSNASQSHQILCCAYNANGTIFVTGSS-DSNARVWSASKPNLDDAEQPT 421
Query: 757 --VQVLKGHTNEV 767
+ VL+GH N+V
Sbjct: 422 HELDVLRGHENDV 434
Score = 111 (44.1 bits), Expect = 3.1e-42, Sum P(5) = 3.1e-42
Identities = 45/181 (24%), Positives = 73/181 (40%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEV 573
LRG + D + G+ D+ ++IW+++T ++ GH+G IT L V
Sbjct: 232 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITD-----LAV 286
Query: 574 NGFNYL-ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI--LCSSFSPGG 630
+ N L AS S D I W+ + IS H + P A + L SS G
Sbjct: 287 SSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGT 346
Query: 631 LFLATGSGDHHV-RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 689
+ + R+Y D+ G S ++ ++ + FV+GS D A +
Sbjct: 347 CRIWDARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARV 406
Query: 690 W 690
W
Sbjct: 407 W 407
Score = 97 (39.2 bits), Expect = 4.3e-18, Sum P(4) = 4.3e-18
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV--LL 781
+T +A +++ V +A N +F I++W +G + VL+GHT V + P + V LL
Sbjct: 281 ITDLAVSSNNALVASASN-DFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLL 339
Query: 782 SAGHDGLIIIWD 793
S+ DG IWD
Sbjct: 340 SSSDDGTCRIWD 351
Score = 80 (33.2 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 497 DLLIKLWRARDGKLLATLRGCSGE--ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS 554
D I +W A DG L+ L G S + D+ N I ++AG KTI IW++ PI
Sbjct: 549 DCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTI-IWDIWEGIPIK 607
Query: 555 VL-VGHQGIITG 565
V +G ++ G
Sbjct: 608 VYEIGRFKLVDG 619
Score = 77 (32.2 bits), Expect = 1.1e-63, Sum P(5) = 1.1e-63
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 302 LTRLD---QELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERY-DW 345
LT LD +E+ LI+ +L GPC L D + K LLP RY W
Sbjct: 35 LTDLDMDLREVYFLILHFLSIGPCERTFGHLRDEILEKGLLPRRYHSW 82
Score = 64 (27.6 bits), Expect = 1.1e-63, Sum P(5) = 1.1e-63
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ R +N++YR I S + DV + +NAE + ++++ + + D L + +++
Sbjct: 1465 IHERLENQYYRSIESFKHDVDAMLSNAELYFVRSAHMLSKIKRLRDKLTKTLRK 1518
Score = 57 (25.1 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 1126 PKRVRRHTKVKPIQVSLPKQLIPEEVPD-IYKPSDWLAEVVP 1166
PK+VRR ++K + P++L P+EV D + D A + P
Sbjct: 1063 PKKVRR-LRLKLRHPNSPRKLEPDEVADDLADGGDGFASIAP 1103
Score = 55 (24.4 bits), Expect = 1.5e-14, Sum P(5) = 1.5e-14
Identities = 35/133 (26%), Positives = 53/133 (39%)
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+ L T RG + I ++DNR +L A +D I +WN + + L GH +
Sbjct: 523 RFLPTPRGVNMIIW--SLDNRFVL--AAIMDCRICVWNAADGSLVHCLTGHSE-----SS 573
Query: 569 CPLEVNGFN-YLA-STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626
L+V+ FN +A S DG W I I + + + I+ S
Sbjct: 574 YVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDGTSIVLSDD 633
Query: 627 SPGGLFLATGSGD 639
FL TG G+
Sbjct: 634 VGQIYFLNTGQGE 646
Score = 52 (23.4 bits), Expect = 3.1e-36, Sum P(5) = 3.1e-36
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRA 505
N + C ++ G + VTG+ D ++W A
Sbjct: 376 NASQSHQILCCAYNANGTIFVTGSSDSNARVWSA 409
Score = 47 (21.6 bits), Expect = 2.4e-49, Sum P(5) = 2.4e-49
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 1149 EEVPDIYKPSDWLA-EVVPKKAPYYPQMGDEVM 1180
EE+P + +P++ A E + + P+Y DE++
Sbjct: 1031 EEIP-VCEPTELTAPENIEEAQPFYGDEADEIL 1062
Score = 42 (19.8 bits), Expect = 3.4e-47, Sum P(4) = 3.4e-47
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVL 1809
+++ S + E + SIP ++P++ L+ L
Sbjct: 899 DDNDSSNSESDRSIPTLRQLDKPSQMLESL 928
Score = 42 (19.8 bits), Expect = 3.4e-47, Sum P(4) = 3.4e-47
Identities = 15/77 (19%), Positives = 28/77 (36%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLSLHXXXXX 1845
S+ + + + A+ + L K G S++ DN S SE + +L
Sbjct: 862 SKRKHSDVKASRPQRAAAQNARSLLSKISGSSSDEVDDDNDSSNSESDRSIPTLRQLDKP 921
Query: 1846 XXXXXXMGKRKRTTRLV 1862
+ K+ RL+
Sbjct: 922 SQMLESLSNDKQKKRLI 938
Score = 41 (19.5 bits), Expect = 2.6e-61, Sum P(5) = 2.6e-61
Identities = 19/79 (24%), Positives = 31/79 (39%)
Query: 1549 DSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY- 1607
DS +K + D+ P+ I E L Y S F DV + N+ Y
Sbjct: 1436 DSYGIQKLNEAAQKMDFCNRFPVPLYPELIHERLENQYYRSIESFKHDVDAMLSNAELYF 1495
Query: 1608 --NQNKRSKIYIMTTRLSE 1624
+ + SKI + +L++
Sbjct: 1496 VRSAHMLSKIKRLRDKLTK 1514
Score = 41 (19.5 bits), Expect = 5.2e-48, Sum P(5) = 5.2e-48
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 1785 ESQEDENSIPETDTTEQPAKKLKVLY 1810
E + + + + TD E P ++ +V+Y
Sbjct: 1362 EGRIESSQVKSTDFPESPWERYRVVY 1387
Score = 39 (18.8 bits), Expect = 7.8e-32, Sum P(4) = 7.8e-32
Identities = 14/58 (24%), Positives = 21/58 (36%)
Query: 170 DNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKN 227
D+ E P + DV R N NY Q + ++ E+ + W H N
Sbjct: 415 DDAEQPTHEL-DVLRGHENDVNYVQFSGCAVAPKSSTADALKEDSYPKFKNSWFCHDN 471
Score = 39 (18.8 bits), Expect = 2.8e-12, Sum P(4) = 2.8e-12
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 415 SSYDYIARQHGTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLM 457
SS I R ++V S + H+ V R + + +RSL+
Sbjct: 844 SSNSGIKRTKNRRIVVKASKRKHSDVKASRPQRAAAQNARSLL 886
>TAIR|locus:2158044 [details] [associations]
symbol:AT5G49430 "AT5G49430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0080008 KO:K11797 IPI:IPI00523511
RefSeq:NP_199754.2 UniGene:At.51087 ProteinModelPortal:F4K639
PRIDE:F4K639 EnsemblPlants:AT5G49430.1 GeneID:835003
KEGG:ath:AT5G49430 OMA:CCAFNAN Uniprot:F4K639
Length = 1677
Score = 281 (104.0 bits), Expect = 6.8e-59, Sum P(5) = 6.8e-59
Identities = 76/249 (30%), Positives = 122/249 (48%)
Query: 445 SREYSGPLSRSLMISSHKYSNLRQHYVNL----GHLSAVFCVLFDKLGEVIVTGADDLLI 500
+R + P R+ K S++ Q N+ GH +AV+C + D+ G ++TG+DD L+
Sbjct: 210 ARHHRAPSIRAACYVIAKPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLV 269
Query: 501 KLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ 560
K+W LA+ RG G+I+D+A+ + NI +A+ + D IR+W L P+SVL GH
Sbjct: 270 KVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHT 329
Query: 561 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF--HEPVMFNERIRPG- 617
G +T + F P + + L+S S DG W + + ++ P + P
Sbjct: 330 GAVTAIAFSPRPGSPYQLLSS-SDDGTCRIWDAR-GAQFAPRIYVPRPPSPDGKNSGPSS 387
Query: 618 -NA---H-ILCSSFSPGGLFLATGSGDHHVRVYKM--------DGVDSPLGILEV-EEHS 663
NA H I C +F+ G TGS D RVY + D + P ++V H
Sbjct: 388 SNAQQSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGHE 447
Query: 664 DKVDSIQWS 672
+ V+ +Q+S
Sbjct: 448 NDVNYVQFS 456
Score = 257 (95.5 bits), Expect = 6.8e-59, Sum P(5) = 6.8e-59
Identities = 80/262 (30%), Positives = 125/262 (47%)
Query: 660 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIW-------YYKCSQW-RFIRLDMNTC-LPH 710
+E+ K + + H ++ V+ SRDG+A+IW + K +W R L + +P
Sbjct: 472 DENVPKFKNSWFCHDNI--VTCSRDGSAIIWIPRLRRSHGKSCRWTRAYHLKVPPPPMPP 529
Query: 711 TKETSDETNKKIK----VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNE 766
+ + V M+AW +R+V+ AI + +I +W+A +G LV L GHT
Sbjct: 530 QPPRGGPRQRILPTPRGVNMIAWSLDNRFVLAAI-MDCRICVWNASDGSLVHSLTGHTAS 588
Query: 767 VFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVEGQGEGALFDGKWSPD 825
+V++ HPF+ R+ +SAG+DG I+WDI + Y H L DGK+SPD
Sbjct: 589 TYVMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHY--------KLVDGKFSPD 640
Query: 826 GTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHTDYRTLNRPNGLFEPTYDEVTNLPPH 885
GT+ L+D G L + G ++ + FF DYR L + + D+ + L P+
Sbjct: 641 GTSIILSDDVGQLYILSTGQGDSQKDAKYDQFFLGDYRPLIQDT--YGNVLDQESQLQPY 698
Query: 886 L--MPPPFLVDLNGTPYPPEVQ 905
M P L D PY Q
Sbjct: 699 RRNMEDP-LCDSGMIPYEEPYQ 719
Score = 233 (87.1 bits), Expect = 6.8e-59, Sum P(5) = 6.8e-59
Identities = 95/334 (28%), Positives = 153/334 (45%)
Query: 1133 TKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAP-YYPQMGDEVMFFKQGYQKYVD 1191
++ KPI+ P+QLI E V WL + ++ Y PQMGDEV + +QG+Q+Y++
Sbjct: 1357 SETKPIETKKPQQLI-ENV-------SWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLN 1408
Query: 1192 AVRSKGIYELSRLRSSPWGNLILQEPELVKVVGIKYEIAPPR--MCC-LKLAVMKPNGKL 1248
+ E++ S GN+ + E+ KV ++Y P CC + L V+ PN ++
Sbjct: 1409 F---SSLREVAPWTSIKGGNI--KAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEV 1463
Query: 1249 TNEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMI-------DDAWWWGTIE 1301
N+ F + ++ DF V R YE AI R W D+ C + D +WW G I
Sbjct: 1464 FNKAFKLTLPEVVTFPDFLVERSRYEAAIQRNWTCRDK-CKVWWRDEGEEDGSWWEGRIL 1522
Query: 1302 G-KP-SPT--KSPFLGYKILWDNNERE-NL-SPWDLEPPKEGKEATEPGGSLPVEPEEIQ 1355
KP SP SP+ Y + + ++ E +L SPW+L E +P ++ E+
Sbjct: 1523 AVKPKSPDFPDSPWERYTVKYKSDPAETHLHSPWELFDADTKWE--QPH----IDDEQRN 1576
Query: 1356 ELLYHPRPDEWPQGDRDATCEKIITGLEEVMG-LSVAEPFLVPVDISQXXXXXXXXXXXX 1414
LL E D+ + L + +G S + F VP+
Sbjct: 1577 RLLSALTKLE--TSDKRTQDSFGLRKLNQTVGNSSYSNRFPVPLS--------------- 1619
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
L +R+R +N +YR + + + DV + +NAE F
Sbjct: 1620 -LEVIRSRLENNYYRSVEALRHDVSVMLSNAETF 1652
Score = 89 (36.4 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 497 DLLIKLWRARDGKLLATLRG--CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS 554
D I +W A DG L+ +L G S + D+ N I ++AG KTI +W++ PI
Sbjct: 565 DCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDGKTI-VWDIWEGIPIQ 623
Query: 555 VL-VGHQGIITGVNFCP 570
+ + H ++ G F P
Sbjct: 624 IYDISHYKLVDG-KFSP 639
Score = 87 (35.7 bits), Expect = 1.9e-17, Sum P(4) = 1.9e-17
Identities = 70/315 (22%), Positives = 127/315 (40%)
Query: 547 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606
+Q + I L GH+ + +C + Y+ + S D + W ++ HE
Sbjct: 232 VQKMQNIKRLRGHRNAV----YCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHE 287
Query: 607 PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM-DGVDSPLGILEVEEHSDK 665
G+ L + S +F+A+ S D +RV+++ DG+ P+ +L H+
Sbjct: 288 ----------GDITDL--AVSSNNIFIASASNDCVIRVWRLPDGL--PVSVLR--GHTGA 331
Query: 666 VDSIQWSH---SHLRFVSGSRDGTALIWYYKCSQWR---FIRLDMNTCLPHTKETSDETN 719
V +I +S S + +S S DGT IW + +Q+ ++ + ++ +S
Sbjct: 332 VTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQ 391
Query: 720 KKIKVTMVAWDASDRWVITAINFNFQ--IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
+ ++ A++AS +T + +W A N + +E+ VL H D
Sbjct: 392 QSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSA-NKTNTDDPEQPNHEMDVLAGHENDV 450
Query: 778 RVLLSAG--HDGLIIIWDILSSKQ-RGYK--WF-H-NIVEGQGEGALFDGKWSP-----D 825
+ +G + D + +K WF H NIV +G+ W P
Sbjct: 451 NYVQFSGCAAGSKFSVTDYSKDENVPKFKNSWFCHDNIVTCSRDGSAII--WIPRLRRSH 508
Query: 826 GTTCALTDSYGHLLV 840
G +C T +Y HL V
Sbjct: 509 GKSCRWTRAY-HLKV 522
Score = 73 (30.8 bits), Expect = 4.9e-16, Sum P(4) = 4.9e-16
Identities = 37/134 (27%), Positives = 59/134 (44%)
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
++L T RG + + ++DNR +L A +D I +WN + + L GH T +
Sbjct: 539 RILPTPRGVN--MIAWSLDNRFVL--AAIMDCRICVWNASDGSLVHSLTGH----TASTY 590
Query: 569 CPLEVNGFN-YLA-STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626
++V+ FN +A S DG W I I + + + P I+ S
Sbjct: 591 V-MDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILSD- 648
Query: 627 SPGGLF-LATGSGD 639
G L+ L+TG GD
Sbjct: 649 DVGQLYILSTGQGD 662
Score = 61 (26.5 bits), Expect = 6.8e-59, Sum P(5) = 6.8e-59
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 305 LD-QELMLLIIKYLEKGPCHEAAKVLT-DLVEAKNLLPERYD-W 345
LD +E+ L++ L GPC + +L +L+E + LLP RY W
Sbjct: 47 LDLREVYFLMLHLLSSGPCQKTYALLRHELLEHE-LLPRRYHAW 89
Score = 51 (23.0 bits), Expect = 3.3e-40, Sum P(5) = 3.3e-40
Identities = 17/64 (26%), Positives = 25/64 (39%)
Query: 1549 DSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY- 1607
DS RK + + Y P+ L IR L + Y S DV + N+ +
Sbjct: 1594 DSFGLRKLNQTVGNSSYSNRFPVPLSLEVIRSRLENNYYRSVEALRHDVSVMLSNAETFF 1653
Query: 1608 NQNK 1611
+NK
Sbjct: 1654 GRNK 1657
Score = 37 (18.1 bits), Expect = 6.8e-59, Sum P(5) = 6.8e-59
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 969 LRSRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHK 1008
LRS N +S+ T P T Q V L LS H+
Sbjct: 1344 LRSTRNRKSTYPFSETKPIETKKPQQLIENVSWLTLSIHE 1383
>DICTYBASE|DDB_G0285837 [details] [associations]
symbol:DDB_G0285837 "BRWD group protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 dictyBase:DDB_G0285837 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
EMBL:AAFI02000080 HSSP:Q03330 RefSeq:XP_638029.1
ProteinModelPortal:Q54MP8 EnsemblProtists:DDB0220685 GeneID:8625294
KEGG:ddi:DDB_G0285837 InParanoid:Q54MP8 OMA:DEITDIY Uniprot:Q54MP8
Length = 2200
Score = 381 (139.2 bits), Expect = 1.2e-41, Sum P(7) = 1.2e-41
Identities = 126/454 (27%), Positives = 214/454 (47%)
Query: 474 GHLSAV--FCVLFDKLGEVIVTGADDLLIKLWRARDGKL--LATLRG----CSGEISDIA 525
GHL + C FD ++ T ++D +I++W + +A+L G + I+ I+
Sbjct: 394 GHLGDITDMCTSFDN--SLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSIS 451
Query: 526 -IDNRNI-LLAAGTVDKTIRIWNL-QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582
+ N LL + ++WNL ++ IS+ + G + +N +N
Sbjct: 452 FLSNPTTRLLVSSDSFGQCKLWNLDKSNHVISLSLNDNGSQSTINTG--NINDEQIDTEM 509
Query: 583 STDGCIGFWKYK-LDIDISKTVFHEPVMF---NERIRPGNAH-ILCSSFSPGGLFLATGS 637
TD + + I+ T PG + I ++ + GG L S
Sbjct: 510 ITDAEVPILTATTITTAITTTATTATATIATTTTTTTPGKTNEITGTTMNKGGT-LIVAS 568
Query: 638 GDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCS-Q 696
D ++++ + P + +E H + ++Q+SH VSGS DGT +IW + +
Sbjct: 569 VDSSLKIWSTL-FNPPKLVNTLEGHPTTILALQYSHGSDAIVSGSYDGTVIIWRHSGGPK 627
Query: 697 WRFIRLDM-NTCLPHTKETSDETNKKIKVTM--VAWDASDRWVITAINFNFQIKIWDAFN 753
W + ++ NT P+ + + + K T V W DR++IT ++N I++W++ +
Sbjct: 628 WDHVIFNIKNTQRPNQANSHPKKVARSKATFKNVIWSHDDRFIITT-DYNM-IRVWNSLD 685
Query: 754 GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQG 813
G + HT+EV+V HPFDSR+++S+G+D +I+W I + + K F +++ G
Sbjct: 686 GSFHLEMAEHTSEVYVTSCHPFDSRLIMSSGYDSQVILWSIETGEI--IKKF--VLQEPG 741
Query: 814 -EGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQN----IPRELFFHTDYRTLNRP 868
+ + DG +SPDG +T+S G ++ LG N +P E +F TDY L R
Sbjct: 742 FQCQILDGCFSPDGQKFIVTNSTGKWFMFELGLGSDINNLKKLVPNEQYFLTDYHPLIRD 801
Query: 869 -NGLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYP 901
NG DE+T PPHLMP LV+ G PYP
Sbjct: 802 ANG---NVLDELTQTPPHLMPRAMLVNYQGLPYP 832
Score = 214 (80.4 bits), Expect = 4.3e-24, Sum P(7) = 4.3e-24
Identities = 54/150 (36%), Positives = 78/150 (52%)
Query: 452 LSRSLMISSHK----YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD 507
+S+SL +S YSN + + GH + +C+ FDK G + TG+DD L+K+W
Sbjct: 326 ISKSLKSTSQLPISFYSNFKNSLIVYGHKAPTYCLQFDKSGRLYFTGSDDHLVKVWSTYS 385
Query: 508 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQ----G 561
G+L+ATLRG G+I+D+ N LLA + D IRIWNL + I+ L GH
Sbjct: 386 GRLIATLRGHLGDITDMCTSFDNSLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNN 445
Query: 562 IITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
IT ++F L L S+ + G W
Sbjct: 446 TITSISF--LSNPTTRLLVSSDSFGQCKLW 473
Score = 105 (42.0 bits), Expect = 1.2e-41, Sum P(7) = 1.2e-41
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 1250 NEFFNIKYHDMPDVIDFFVLRQIYETAIAREWNVGDRFCSMIDDA--WWWGTI----EGK 1303
+ F+ + YH + D+ D+ VL ++ +W V ++ M A W+ GTI +
Sbjct: 1347 SNFYTVIYH-VSDIPDYLVLASKVRKSMLTDWTVPNKRFRMFYPASGWYNGTIIEISDSD 1405
Query: 1304 PSPTKSPFLGYKILWDNNEREN-LSPWDLE 1332
P SP+ K+LWD+ E E+ ++ W+++
Sbjct: 1406 PLFPNSPWENIKVLWDDTEEEDRVNYWEID 1435
Score = 99 (39.9 bits), Expect = 1.8e-12, Sum P(7) = 1.8e-12
Identities = 20/70 (28%), Positives = 42/70 (60%)
Query: 729 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGL 788
+D S R T + + +K+W ++G L+ L+GH ++ + + FD+ +L +A +D +
Sbjct: 362 FDKSGRLYFTGSDDHL-VKVWSTYSGRLIATLRGHLGDITDMCTS-FDNSLLATASNDNV 419
Query: 789 IIIWDILSSK 798
I IW++ S++
Sbjct: 420 IRIWNLNSNQ 429
Score = 91 (37.1 bits), Expect = 1.2e-41, Sum P(7) = 1.2e-41
Identities = 20/109 (18%), Positives = 53/109 (48%)
Query: 1365 EWPQGDRDATCEKIITGLEEVM-GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARF 1423
++ + D E + ++E + + + + PVD+ D++T+ R
Sbjct: 1714 QYVESIEDEKIENLKKEMKEFLENDEITDIYSEPVDLKLYPLYIRFVPHPMDISTIIKRL 1773
Query: 1424 QNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
++ +YR + + FD + + +A +N+P++ + K ++++ + I+KE
Sbjct: 1774 ESSYYRSLDAIYFDAKLIMIDAYVYNKPNTMVAKNSKLVFHRISDILKE 1822
Score = 87 (35.7 bits), Expect = 3.2e-41, Sum P(7) = 3.2e-41
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 1520 EAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIR 1579
E++ +K++ N K E +E LE + ++ + +PVD +P Y + V PMD+ TI
Sbjct: 1717 ESIEDEKIE---NLKKEMKEFLENDEI---TDIYSEPVDLKLYPLYIRFVPHPMDISTII 1770
Query: 1580 EELRGDNYESPIDFVK-DVKRVFHNSRNYNQ-N----KRSKIYIMTTRLSEFAEE 1628
+ L Y S +D + D K + ++ YN+ N K SK+ R+S+ +E
Sbjct: 1771 KRLESSYYRS-LDAIYFDAKLIMIDAYVYNKPNTMVAKNSKLVFH--RISDILKE 1822
Score = 72 (30.4 bits), Expect = 1.2e-41, Sum P(7) = 1.2e-41
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 1160 WLAEVVPKKAPYY-PQMGDEVMFFKQGYQKYVDAVRSKGI 1198
WL+ +Y PQ+GD + +F QG+ KY++ GI
Sbjct: 1203 WLSITSTTSETFYSPQVGDFIFYFYQGHTKYLEKFPPNGI 1242
Score = 61 (26.5 bits), Expect = 6.3e-09, Sum P(7) = 6.3e-09
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 682
C F G TGS DH V+V+ L I + H + + S + + S
Sbjct: 359 CLQFDKSGRLYFTGSDDHLVKVWST--YSGRL-IATLRGHLGDITDMCTSFDNSLLATAS 415
Query: 683 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINF 742
D IW +Q+ D L T N ++ ++ + + R ++++ +F
Sbjct: 416 NDNVIRIWNLNSNQY-----DSIASL--TGHDPSVNNTITSISFLS-NPTTRLLVSSDSF 467
Query: 743 NFQIKIWD 750
Q K+W+
Sbjct: 468 G-QCKLWN 474
Score = 55 (24.4 bits), Expect = 1.2e-41, Sum P(7) = 1.2e-41
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKL--KVLYPKRRGQQSEDGSGDNASE 1828
+E + +EDE E + +K+ KV P++RG++ D S + E
Sbjct: 2060 DEDDNNQEEDEEDYQEKPKPKPRSKQTTPKVTTPRKRGRKKIDQSEEEEDE 2110
Score = 47 (21.6 bits), Expect = 1.2e-41, Sum P(7) = 1.2e-41
Identities = 15/71 (21%), Positives = 36/71 (50%)
Query: 305 LDQELMLLIIKYLEKGPCHEAAKVLTDLVEA--KN-LLPERYDWEGATHSQTLAEVASSH 361
+++E+ L+ ++L + ++T L + KN LLP++ +W G + T E+ +
Sbjct: 32 INREINYLVYRWLNSQNGIDK-NLVTSLFQDFNKNDLLPKKVNWLGQQENFTSNELNEKY 90
Query: 362 PNVTASFLPKI 372
++ + + I
Sbjct: 91 KHIQSDHIKSI 101
Score = 44 (20.5 bits), Expect = 1.2e-41, Sum P(7) = 1.2e-41
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 411 KSVLSSYDYIARQHG 425
KS+ SSY +A QHG
Sbjct: 99 KSIFSSYRDLAIQHG 113
Score = 43 (20.2 bits), Expect = 5.5e-28, Sum P(5) = 5.5e-28
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 905 QRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHG 957
+RL+ GR + + ++DDG ++ S +NG + ++ N +G
Sbjct: 1961 KRLITGRLTRSRSNQSNE-ESDDDGFIDDNNSSHQNGGKILDDSDNDDKNQNG 2012
Score = 41 (19.5 bits), Expect = 3.2e-40, Sum P(7) = 3.2e-40
Identities = 18/61 (29%), Positives = 24/61 (39%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNAS--EMSELKQDPL 1837
EE E Q D NS +D E + Y G +SE +G + E L + P
Sbjct: 2105 EEEEDEDQSDVNSNNNSDN-ESGGEDG---YSGEDGSESESNNGGDIDDEEFLNLLEKPK 2160
Query: 1838 S 1838
S
Sbjct: 2161 S 2161
Score = 41 (19.5 bits), Expect = 8.7e-28, Sum P(5) = 8.7e-28
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 1690 NDFDFNPAGETKTKAESGNEQ 1710
+D DFNP+ ++ +E +Q
Sbjct: 928 SDEDFNPSDASENSSEDEQQQ 948
Score = 38 (18.4 bits), Expect = 4.6e-26, Sum P(5) = 4.6e-26
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 1815 GQQSEDGSGDNASE 1828
G D S DN+SE
Sbjct: 1102 GDDDSDNSSDNSSE 1115
Score = 38 (18.4 bits), Expect = 0.00070, Sum P(4) = 0.00070
Identities = 20/63 (31%), Positives = 26/63 (41%)
Query: 325 AAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPKICQRLGPLLDKEL 384
A K L D+ + K +LP W T T +E S P V F+ Q L+K
Sbjct: 1183 ALKKLNDIRKKKEILPVCPKWLSIT--STTSETFYS-PQV-GDFIFYFYQGHTKYLEK-F 1237
Query: 385 KPN 387
PN
Sbjct: 1238 PPN 1240
Score = 37 (18.1 bits), Expect = 3.4e-36, Sum P(7) = 3.4e-36
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1691 DFDFNPAGETKTKAESGNEQVEE 1713
D D NP + K E+ NE+V E
Sbjct: 1439 DDDQNPQKIKEIKDENENEKVIE 1461
Score = 37 (18.1 bits), Expect = 2.2e-27, Sum P(5) = 2.2e-27
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 913 NADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHGHVYIQTSHVHVLRSR 972
N D E DI+ +D H G +N R + + D G + + + R +
Sbjct: 1890 NGDGLE--GDISISDSEHDNSKTG--KNITRSLLSPSE----DEGGINVNRTPSKRGRKK 1941
Query: 973 ANGESSAATEGTSPSGT 989
AN ++ T T+ S T
Sbjct: 1942 ANATTTTTTTTTTTSST 1958
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 190 (71.9 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 63/203 (31%), Positives = 92/203 (45%)
Query: 425 GTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLF 484
G + L PNSV S S SL + + Y+ L+ + GH AV V F
Sbjct: 28 GPNSLQPNSV---GQPGATTSSNSSASNKSSLSVKPN-YT-LK--FTLAGHTKAVSAVKF 80
Query: 485 DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRI 544
GE + + + D LIK+W A DGK T+ G ISD+A + + LL +G+ DKT+++
Sbjct: 81 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKV 140
Query: 545 WNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF 604
W L T + L GH + NF P N + S S D + W + +
Sbjct: 141 WELSTGKSLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDVRTGKCLKTLPA 196
Query: 605 H-EPVMFNERIRPGNAHILCSSF 626
H +PV R G+ I+ SS+
Sbjct: 197 HSDPVSAVHFNRDGSL-IVSSSY 218
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 47/194 (24%), Positives = 90/194 (46%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W R GK L TL S +S + + L+
Sbjct: 154 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 213
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 214 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 270
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 271 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEV 320
Query: 653 PLGILEVEEHSDKV 666
+ +++ H+D V
Sbjct: 321 ---VQKLQGHTDTV 331
Score = 110 (43.8 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 197 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 243
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 244 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 299
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D ++ IW+ L SK+
Sbjct: 300 WIVSGSEDNMVYIWN-LQSKE 319
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 176 (67.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 76
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 77 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 132
Query: 594 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 626
K + H +PV R G+ I+ SS+
Sbjct: 133 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 165
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 160
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 161 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 217
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 218 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 267
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 694
+ +++ H+D V S + S + D T +W C
Sbjct: 268 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 308
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 144 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 190
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 191 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 246
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D L+ IW+ L +K+
Sbjct: 247 WIVSGSEDNLVYIWN-LQTKE 266
Score = 91 (37.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 175
Query: 796 SSK 798
S +
Sbjct: 176 SGQ 178
Score = 88 (36.0 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 70
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 71 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 117
Query: 633 LATGSGDHHVRVY 645
+ +GS D VR++
Sbjct: 118 IVSGSFDESVRIW 130
Score = 87 (35.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 153 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 210
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y + CL K + N+K + +W+++ N
Sbjct: 211 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 256
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 257 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 304
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 594 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 626
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 694
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 109 (43.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 796 SSK 798
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 633 LATGSGDHHVRVY 645
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 594 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 626
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 694
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 109 (43.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 796 SSK 798
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 633 LATGSGDHHVRVY 645
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 594 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 626
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 694
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 109 (43.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 796 SSK 798
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 633 LATGSGDHHVRVY 645
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 594 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 626
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 694
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 109 (43.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 796 SSK 798
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 633 LATGSGDHHVRVY 645
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 594 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 626
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTGHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 293
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 694
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 109 (43.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ GH NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSVTGGK 272
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 796 SSK 798
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 633 LATGSGDHHVRVY 645
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 87 (35.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y + CL K + N+K + +W+++ N
Sbjct: 237 TLKLWDYSKGK----------CL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
>RGD|1307282 [details] [associations]
symbol:Brd4 "bromodomain containing 4" species:10116 "Rattus
norvegicus" [GO:0000114 "regulation of transcription involved in G1
phase of mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006468
"protein phosphorylation" evidence=ISO] [GO:0007059 "chromosome
segregation" evidence=ISO] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=ISO] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=ISO] [GO:0043388 "positive
regulation of DNA binding" evidence=ISO] [GO:0043983 "histone
H4-K12 acetylation" evidence=ISO] [GO:0044154 "histone H3-K14
acetylation" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1307282 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
HOGENOM:HOG000231200 HOVERGEN:HBG004896 EMBL:BC100641
IPI:IPI00769116 UniGene:Rn.12110 STRING:Q497A6 UCSC:RGD:1307282
Genevestigator:Q497A6 Uniprot:Q497A6
Length = 566
Score = 154 (59.3 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K KR N R VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 154 (59.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K KR N R VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 144 (55.7 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 1328 PWDLEP-PKEGKEATEPGGSLPVEP--EEIQELLYHPRPDEWPQ-GDRDATCEKIITGLE 1383
P L P PK K S PV+P +++ + HP P++ + ++ C I+ +
Sbjct: 307 PPSLAPEPKTAKLGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMF 366
Query: 1384 EVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYL 1441
+ A PF PVD+ D++T++++ ++R YR DVR +
Sbjct: 367 AKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLM 426
Query: 1442 AANAEKFNEPHSNIVKYARIITDLL-LRIIKEPNPVDVPVV 1481
+N K+N P +V AR + D+ +R K P+ + PVV
Sbjct: 427 FSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVV 467
Score = 107 (42.7 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMD+ TI+ +L Y +F DV+ +F N YN
Sbjct: 376 PFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNP 435
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 436 PDH-EVVAMARKLQDVFEMRFAKM 458
Score = 63 (27.2 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
T++ R +N +Y D + N +N+P +IV A + L L+ I E
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINE 163
Score = 41 (19.5 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
+S+S+S D +S + D+ E+ A++L L
Sbjct: 488 DSSSDSSSDSDSSTD-DSEEERAQRLAEL 515
>UNIPROTKB|I3L6E5 [details] [associations]
symbol:BRD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0044154 "histone H3-K14 acetylation" evidence=IEA]
[GO:0043983 "histone H4-K12 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0010971 "positive
regulation of G2/M transition of mitotic cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000114 "regulation of transcription
involved in G1 phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005737 GO:GO:0007059 GO:GO:0010971
GO:GO:0003677 GO:GO:0006468 GO:GO:0000790 GO:GO:0000114
GO:GO:0000794 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0001833 GeneTree:ENSGT00700000104261
OMA:PVIRPPE GO:GO:0044154 GO:GO:0043983 GO:GO:0043388 GO:GO:0032968
EMBL:CU914413 EMBL:CU467692 Ensembl:ENSSSCT00000027972
Uniprot:I3L6E5
Length = 1372
Score = 151 (58.2 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 40/117 (34%), Positives = 61/117 (52%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 151 (58.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 40/117 (34%), Positives = 61/117 (52%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 146 (56.5 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 51/193 (26%), Positives = 82/193 (42%)
Query: 1300 IEGKPSPTKSPFLGYKILWDNNERENLSPW----DLEP-PKEGKEATEPGGSLPVEP--E 1352
I P P K+ G K D + P L P PK K S PV+P +
Sbjct: 275 IAATPQPVKTK-KGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGPRRESSRPVKPPKK 333
Query: 1353 EIQELLYHPRPDEWPQ-GDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXX 1411
++ + HP PD+ + ++ C I+ + + A PF PVD+
Sbjct: 334 DVPDSQQHPAPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDI 393
Query: 1412 XXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LR 1468
D++T++++ + R YR DVR + +N K+N P +V AR + D+ +R
Sbjct: 394 IKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 453
Query: 1469 IIKEPNPVDVPVV 1481
K P+ + PVV
Sbjct: 454 FAKMPDEPEEPVV 466
Score = 107 (42.7 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMD+ TI+ +L Y +F DV+ +F N YN
Sbjct: 375 PFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNP 434
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 435 PDH-EVVAMARKLQDVFEMRFAKM 457
Score = 73 (30.8 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 33/147 (22%), Positives = 58/147 (39%)
Query: 1336 EGKEATEPGGS-LPVEPEEIQELLYHPRPDEW--PQGDRDATCE-----KIITGLEEVMG 1387
+G E T+ + +P++ +P P E P + T + K++ L+ +
Sbjct: 19 DGLETTQMSTTQAQAQPQQANTASTNPPPPETSNPNKPKRQTNQLQYLLKVV--LKTLWK 76
Query: 1388 LSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANA 1445
A PF PVD + D+ T++ R +N +Y D + N
Sbjct: 77 HQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNC 136
Query: 1446 EKFNEPHSNIVKYARIITDLLLRIIKE 1472
+N+P +IV A + L L+ I E
Sbjct: 137 YIYNKPGDDIVLMAEALEKLFLQKINE 163
Score = 63 (27.2 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
T++ R +N +Y D + N +N+P +IV A + L L+ I E
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINE 163
Score = 54 (24.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDP 1836
E+ E +++++ E + E K K L PK+ + + S + E + LK P
Sbjct: 540 EKDKKEKKKEKHKKKE-EVEENKKSKAKELPPKKTKKNNSSNSNTSKKEPAPLKNKP 595
Score = 41 (19.5 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
+S+S+S D +S + D+ E+ A++L L
Sbjct: 487 DSSSDSSSDSDSSTD-DSEEERAQRLAEL 514
Score = 40 (19.1 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKK 1805
ES SES ++ ET+ + KK
Sbjct: 704 ESTSESSSSDSEDSETEMAPKSKKK 728
Score = 38 (18.4 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1782 SASESQEDENSIPETDT-TEQPAKKLKVLYPKR 1813
S SES + +S D+ TE K K +P R
Sbjct: 701 SESESTSESSSSDSEDSETEMAPKSKKKGHPGR 733
Score = 37 (18.1 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 7/45 (15%), Positives = 24/45 (53%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMS 1830
S+EDE+++ + + A++ + +++ Q+ + A+ ++
Sbjct: 1271 SREDEDALEQARRAHEEARRRQEQQQQQQRQEQQQQQQQQAAAVA 1315
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 177 (67.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
Y GHL ++ V F G+ + + + D IK+W A DGK TL G ISDIA
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+ L+ + + DKTI+IW++++ + L GH+ + GV+F P N + S S D +
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQS----NLIVSGSFDENVR 155
Query: 590 FW 591
W
Sbjct: 156 IW 157
Score = 158 (60.7 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 41/172 (23%), Positives = 82/172 (47%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + + + ++I + +DD IK+W GK++ TL+G + ++ + ++ L+
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G+ D+ +RIW++ T ++ H +TGV+F +G + S S DG + W
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHF---NRDG-TLVVSGSYDGTVRIW-- 199
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
D + + N + FSP G F+ G+ D+ +R++
Sbjct: 200 --DTTTGQ-------LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 100 (40.3 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 38/168 (22%), Positives = 72/168 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + +GS D VR++ L + E+ + V +++S + ++G+ D
Sbjct: 180 FNRDGTLVVSGSYDGTVRIWDTT-TGQLLNTISTEDGKE-VSFVKFSPNGKFVLAGTLDN 237
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y ++ CL K + N+K + +W++T N
Sbjct: 238 TLRLWSYNNNK---------KCL---KTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNL- 284
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA-GHDGLIIIW 792
I I++ ++VQ L GH + V + HP ++ + A D + IW
Sbjct: 285 IYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 58 (25.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 24/104 (23%), Positives = 51/104 (49%)
Query: 700 IRL-DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL 756
+R+ D+NT C TK S ++ VT V ++ V++ +++ ++IWD G L
Sbjct: 154 VRIWDVNTGEC---TKMISAHSDP---VTGVHFNRDGTLVVSG-SYDGTVRIWDTTTGQL 206
Query: 757 VQVLKGHTN-EVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799
+ + EV ++ P + + +L+ D + +W ++K+
Sbjct: 207 LNTISTEDGKEVSFVKFSP-NGKFVLAGTLDNTLRLWSYNNNKK 249
>UNIPROTKB|E1BNS3 [details] [associations]
symbol:BRD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0044154 "histone H3-K14 acetylation" evidence=IEA]
[GO:0043983 "histone H4-K12 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0010971 "positive
regulation of G2/M transition of mitotic cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000114 "regulation of transcription
involved in G1 phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005737 GO:GO:0007059 GO:GO:0010971
GO:GO:0003677 GO:GO:0006468 GO:GO:0000790 GO:GO:0000114
GO:GO:0000794 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0001833 GeneTree:ENSGT00700000104261
OMA:PVIRPPE GO:GO:0044154 GO:GO:0043983 GO:GO:0043388 GO:GO:0032968
EMBL:DAAA02019141 IPI:IPI00692227 Ensembl:ENSBTAT00000003242
Uniprot:E1BNS3
Length = 1367
Score = 151 (58.2 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 40/117 (34%), Positives = 61/117 (52%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 151 (58.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 40/117 (34%), Positives = 61/117 (52%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 144 (55.7 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 50/193 (25%), Positives = 81/193 (41%)
Query: 1300 IEGKPSPTKSPFLGYKILWDNNERENLSPW----DLEP-PKEGKEATEPGGSLPVEP--E 1352
I P P K+ G K D + P L P PK K S PV+P +
Sbjct: 275 IAATPQPVKTK-KGVKRKADTTTPTTIDPIHEPPSLPPEPKTAKLGPRRESSRPVKPPKK 333
Query: 1353 EIQELLYHPRPDEWPQ-GDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXX 1411
++ + HP PD+ + ++ C I+ + + A PF PVD+
Sbjct: 334 DVPDSQQHPAPDKSSKVSEQLKCCNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDI 393
Query: 1412 XXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LR 1468
D++T++++ + R YR DVR + +N K+N P +V AR + D+ +R
Sbjct: 394 IKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 453
Query: 1469 IIKEPNPVDVPVV 1481
K P+ + P V
Sbjct: 454 FAKMPDEPEEPAV 466
Score = 107 (42.7 bits), Expect = 9.8e-12, Sum P(3) = 9.8e-12
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMD+ TI+ +L Y +F DV+ +F N YN
Sbjct: 375 PFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNP 434
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 435 PDH-EVVAMARKLQDVFEMRFAKM 457
Score = 73 (30.8 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 33/147 (22%), Positives = 58/147 (39%)
Query: 1336 EGKEATEPGGS-LPVEPEEIQELLYHPRPDEW--PQGDRDATCE-----KIITGLEEVMG 1387
+G E T+ + +P++ +P P E P + T + K++ L+ +
Sbjct: 19 DGLETTQMSTTQAQAQPQQANTASTNPPPPETSNPNKPKRQTNQLQYLLKVV--LKTLWK 76
Query: 1388 LSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANA 1445
A PF PVD + D+ T++ R +N +Y D + N
Sbjct: 77 HQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNC 136
Query: 1446 EKFNEPHSNIVKYARIITDLLLRIIKE 1472
+N+P +IV A + L L+ I E
Sbjct: 137 YIYNKPGDDIVLMAEALEKLFLQKINE 163
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
T++ R +N +Y D + N +N+P +IV A + L L+ I E
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINE 163
Score = 54 (24.1 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDP 1836
E+ E +++++ E + E K K L PK+ + + S + E + LK P
Sbjct: 540 EKDKKEKKKEKHKKKE-EVEENKKSKAKELPPKKTKKNNSSNSSTSKKEPAPLKSKP 595
Score = 40 (19.1 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKK 1805
ES SES ++ ET+ + KK
Sbjct: 704 ESTSESSSSDSEDSETEMAPKSKKK 728
Score = 39 (18.8 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSE 1819
S+EDE+++ + + A++ + ++R +Q +
Sbjct: 1268 SREDEDALEQARRAHEEARRRQEQQQQQRQEQQQ 1301
Score = 38 (18.4 bits), Expect = 7.2e-14, Sum P(3) = 7.2e-14
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1782 SASESQEDENSIPETDT-TEQPAKKLKVLYPKR 1813
S SES + +S D+ TE K K +P R
Sbjct: 701 SESESTSESSSSDSEDSETEMAPKSKKKGHPGR 733
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 176 (67.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F GE + + + D LIK+W A DGK T+ G ISD+A + + LL
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT++IW++ + + L GH + NF P N + S S D + W
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDV 158
Query: 594 KLDIDISKTVFH-EPVMFNERIRPGNAHILCSSF 626
K + H +PV R G+ I+ SS+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSY 191
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ +IV+G+ D +++W + GK L TL S +S + + L+
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D RIW+ + + L+ V+F NG Y+ + + D + W Y
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNG-KYILAATLDNTLKLWDY 243
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H+ NE+ + + ++FS GG ++ +GS D+ V ++ + +
Sbjct: 244 SKGKCLKTYTCHK----NEK------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEV 293
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGS--RDGTALIWYYKC 694
+ +++ H+D V S + S + D T +W C
Sbjct: 294 ---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
Score = 100 (40.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 36/141 (25%), Positives = 63/141 (44%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V ++ ++ VS S DG IW Q CL K D+ N
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----------CL---KTLIDDDNPP 216
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD---SR 778
V+ V + + ++++ A N +K+WD G ++ H NE + + ++ F +
Sbjct: 217 --VSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTCHKNEKYCIFAN-FSVTGGK 272
Query: 779 VLLSAGHDGLIIIWDILSSKQ 799
++S D L+ IW+ L +K+
Sbjct: 273 WIVSGSEDNLVYIWN-LQTKE 292
Score = 91 (37.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ ++IWD G ++ L H++ V + + D +++S+ +DGL IWD
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTA 201
Query: 796 SSK 798
S +
Sbjct: 202 SGQ 204
Score = 88 (36.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G + +S + LA+ + DK I+IW + GH+ I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 96
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
+ N L S S D + W D+ K + + ++ + ++ C +F+P
Sbjct: 97 -SDSNLLVSASDDKTLKIW----DVSSGKCL--------KTLKGHSNYVFCCNFNPQSNL 143
Query: 633 LATGSGDHHVRVY 645
+ +GS D VR++
Sbjct: 144 IVSGSFDESVRIW 156
Score = 85 (35.0 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 36/169 (21%), Positives = 75/169 (44%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + + S D R++ D +++ + V +++S + ++ + D
Sbjct: 179 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W Y S+ + ++ TC H N+K + +W+++ N
Sbjct: 237 TLKLWDY--SKGKCLKT--YTC--HK-------NEKYCIFANFSVTGGKWIVSGSEDNL- 282
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ ++ SA +D I +W
Sbjct: 283 VYIWNLQTKEVVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLW 330
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 168 (64.2 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
R+ + +GH + + LF +I+TG+ D LW A GK +ATL G EI D
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF 311
Query: 527 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
D L+A + D T R++N T I+ L GH+G I+ ++F P G N L + S+D
Sbjct: 312 DYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP---QG-NRLLTGSSDK 367
Query: 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 646
W + + H +F+ C+ F+ G + TGS D+ R+++
Sbjct: 368 TARIWDVQTGQCLQVLEGHTDEIFS-----------CA-FNYKGNIVITGSKDNSCRIWR 415
Score = 157 (60.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 474 GHLSAVFCVLFDK-LGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH + V+ + F+ G+ I TG+ D KLW A GK T RG + EI ++ + ++ +
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTV 191
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+A G++D T ++W++Q+ + L GH I ++F + +G + + + S D + W
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSF---DTSG-DRIITGSFDHTVVVW 246
Score = 149 (57.5 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 49/175 (28%), Positives = 72/175 (41%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + C+ F+ V+ TG+ D KLW + G+ + TL G EI ++ D +
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI 234
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF---CPLEVNGFNYLASTSTDGCIGF 590
G+ D T+ +W+ T + L+GH I+ F C L + G S D
Sbjct: 235 ITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTG-------SMDKTCML 287
Query: 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
W D K V + + IL S F G +AT S D RVY
Sbjct: 288 W----DATSGKCV--------ATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Score = 87 (35.7 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
IL S F G +AT S D RVY + I ++E H ++ I ++ R ++
Sbjct: 306 ILDSCFDYTGKLIATASADGTARVYN---ATTRKCITKLEGHEGEISKISFNPQGNRLLT 362
Query: 681 GSRDGTALIWYYKCSQ 696
GS D TA IW + Q
Sbjct: 363 GSSDKTARIWDVQTGQ 378
Score = 84 (34.6 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
SF+P G L TGS D R++ + L +LE H+D++ S +++ ++GS+D
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDVQ-TGQCLQVLE--GHTDEIFSCAFNYKGNIVITGSKD 408
Query: 685 GTALIW 690
+ IW
Sbjct: 409 NSCRIW 414
Score = 83 (34.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 747 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+IWD G +QVL+GHT+E+F + + ++++ D IW
Sbjct: 370 RIWDVQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNSCRIW 414
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 168 (64.2 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 60/217 (27%), Positives = 95/217 (43%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR-NILL 533
H+ + V +K G +TG+ D KLW G+ L TL G + IA +N +
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI 150
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A G+ DKT ++W+++T GH I ++F P +A+ S D W
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST----LVATGSMDTTAKLW-- 204
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 653
DI + V+ +R +A I+ SF+ G + TGS DH V V+ D
Sbjct: 205 --DIQNGEEVY--------TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD-TGRK 253
Query: 654 LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ IL H ++ S ++ ++GS D T +W
Sbjct: 254 VNILI--GHCAEISSASFNWDCSLILTGSMDKTCKLW 288
Score = 166 (63.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
R+ + +GH + + F+ +I+TG+ D KLW A +GK +ATL G EI D
Sbjct: 252 RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCF 311
Query: 527 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
D L+A + D T RI++ T I+ L GH+G I+ ++F P G N+L + S+D
Sbjct: 312 DYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP---QG-NHLLTGSSDK 367
Query: 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 646
W + + H +F+ C+ F+ G + TGS D+ R+++
Sbjct: 368 TARIWDAQTGQCLQVLEGHTDEIFS-----------CA-FNYKGNIVITGSKDNTCRIWR 415
Score = 158 (60.7 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 56/240 (23%), Positives = 104/240 (43%)
Query: 351 SQTLAEVASSHPNVTASFLPKI---CQRLGPLLDKELKPNFPXXXXXXXXXX-XXXXXXE 406
S + E+ + P +TAS ++ QRL L + F
Sbjct: 42 SALVEEIQKAEPLLTASRTEQVKLLIQRLQEKLGQNSNHTFYLFKVLKAHILPLTNVALN 101
Query: 407 KSLAKSVLSSYDYIARQHGTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSH-KYS 464
KS + + SYD + T+ N+++ H NV+ + ++ P + S K
Sbjct: 102 KSGSCFITGSYDRTCKLWDTASGEELNTLEGHR--NVVYAIAFNNPYGDKIATGSFDKTC 159
Query: 465 NL------RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCS 518
L + ++ GH + + C+ F+ ++ TG+ D KLW ++G+ + TLRG S
Sbjct: 160 KLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHS 219
Query: 519 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF---CPLEVNG 575
EI ++ + + G+ D T+ +W+ T +++L+GH I+ +F C L + G
Sbjct: 220 AEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTG 279
Score = 147 (56.8 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 49/181 (27%), Positives = 81/181 (44%)
Query: 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524
N + Y GH + + + F+ G+ I+TG+ D + +W A G+ + L G EIS
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSA 267
Query: 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 584
+ + L+ G++DKT ++W+ ++ L GH I ++ C + G +A+ S
Sbjct: 268 SFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEI--LDSC-FDYTG-KLIATASA 323
Query: 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644
DG + I+K HE I SF+P G L TGS D R+
Sbjct: 324 DGTARIFSAATRKCIAKLEGHE------------GEISKISFNPQGNHLLTGSSDKTARI 371
Query: 645 Y 645
+
Sbjct: 372 W 372
Score = 90 (36.7 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEV-EEHSDKVDSIQWSHSHLRFVSGS 682
SF+P G L TGS D R++ D+ G L+V E H+D++ S +++ ++GS
Sbjct: 352 SFNPQGNHLLTGSSDKTARIW-----DAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS 406
Query: 683 RDGTALIW 690
+D T IW
Sbjct: 407 KDNTCRIW 414
Score = 88 (36.0 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 747 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+IWDA G +QVL+GHT+E+F + + ++++ D IW
Sbjct: 370 RIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNTCRIW 414
Score = 82 (33.9 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 729 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES-HPFDSRVLLSAGHDG 787
WD S ++T + + K+WDA NG V L GH +E+ L+S + +++ +A DG
Sbjct: 271 WDCS--LILTG-SMDKTCKLWDATNGKCVATLTGHDDEI--LDSCFDYTGKLIATASADG 325
Query: 788 LIIIWDILSSK 798
I+ + K
Sbjct: 326 TARIFSAATRK 336
Score = 75 (31.5 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
IL S F G +AT S D R++ + I ++E H ++ I ++ ++
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFS---AATRKCIAKLEGHEGEISKISFNPQGNHLLT 362
Query: 681 GSRDGTALIW 690
GS D TA IW
Sbjct: 363 GSSDKTARIW 372
Score = 46 (21.3 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678
A I +SF+ + TGS D +++ D + + + H D++ + ++
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLW--DATNGKC-VATLTGHDDEILDSCFDYTGKLI 318
Query: 679 VSGSRDGTALIW 690
+ S DGTA I+
Sbjct: 319 ATASADGTARIF 330
Score = 37 (18.1 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 17/77 (22%), Positives = 31/77 (40%)
Query: 308 ELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTAS 367
EL I L+ GP + + ++ ++ +A+ LL + Q L E + N T
Sbjct: 24 ELKTKSIDLLDLGPSTDVSALVEEIQKAEPLLTASRTEQVKLLIQRLQEKLGQNSNHTFY 83
Query: 368 FLPKICQRLGPLLDKEL 384
+ + PL + L
Sbjct: 84 LFKVLKAHILPLTNVAL 100
>RGD|1303324 [details] [associations]
symbol:Brd2 "bromodomain containing 2" species:10116 "Rattus
norvegicus" [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO;ISS] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 RGD:1303324 GO:GO:0005634
GO:GO:0005737 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
PROSITE:PS51525 CTD:6046 GeneTree:ENSGT00700000104261
HOGENOM:HOG000231200 HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP
HSSP:P25440 EMBL:BX883042 IPI:IPI00422052 RefSeq:NP_997660.1
RefSeq:XP_003751971.1 UniGene:Rn.98146 ProteinModelPortal:Q6MGA9
SMR:Q6MGA9 STRING:Q6MGA9 PhosphoSite:Q6MGA9 PRIDE:Q6MGA9
Ensembl:ENSRNOT00000000535 GeneID:100909544 GeneID:294276
KEGG:rno:100909544 KEGG:rno:294276 UCSC:RGD:1303324
InParanoid:Q6MGA9 NextBio:637874 ArrayExpress:Q6MGA9
Genevestigator:Q6MGA9 Uniprot:Q6MGA9
Length = 798
Score = 145 (56.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 64 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 124 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 183 EQELVVTIPKNSHK 196
Score = 145 (56.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 64 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 124 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 183 EQELVVTIPKNSHK 196
Score = 114 (45.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 333 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 391
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 392 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 446
Score = 114 (45.2 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 333 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 391
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 392 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 446
Score = 108 (43.1 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 352 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 411
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 412 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 458
Score = 74 (31.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 1747 DPEQPGP---STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPET-DTTEQP 1802
+P +PGP ST+ +A +S EE E +EDE E+ D+ E+
Sbjct: 455 EPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEESESSDSEEER 514
Query: 1803 AKKLKVLYPKRR 1814
A +L L + R
Sbjct: 515 AHRLAELQEQLR 526
Score = 67 (28.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 95 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 154
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 155 NKPTDDIVLMAQTLEKIFLQ 174
Score = 60 (26.2 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 124 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 174
Score = 41 (19.5 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 355 ILKELLSKKHAAYAWPFYKPVDASALG 381
>MGI|MGI:1888520 [details] [associations]
symbol:Brd4 "bromodomain containing 4" species:10090 "Mus
musculus" [GO:0000114 "regulation of transcription involved in G1
phase of mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO;IDA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IPI] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=ISO] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISO] [GO:0043388 "positive regulation of DNA binding"
evidence=IDA] [GO:0043983 "histone H4-K12 acetylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IMP] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 MGI:MGI:1888520 GO:GO:0007059
GO:GO:0003677 GO:GO:0006468 GO:GO:0000790 GO:GO:0000794
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 PROSITE:PS51525 GO:GO:0001833
GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 CTD:23476 KO:K11722 ChiTaRS:BRD4 GO:GO:0044154
GO:GO:0043983 GO:GO:0043388 EMBL:AF273217 EMBL:AF461395
EMBL:AF461396 IPI:IPI00652110 IPI:IPI00885355 RefSeq:NP_065254.3
RefSeq:NP_932762.2 UniGene:Mm.253518 PDB:2DWW PDB:2JNS PDB:3JVJ
PDB:3JVK PDB:3JVL PDB:3JVM PDB:3MUK PDB:3MUL PDBsum:2DWW
PDBsum:2JNS PDBsum:3JVJ PDBsum:3JVK PDBsum:3JVL PDBsum:3JVM
PDBsum:3MUK PDBsum:3MUL ProteinModelPortal:Q9ESU6 SMR:Q9ESU6
IntAct:Q9ESU6 MINT:MINT-1176459 STRING:Q9ESU6 PhosphoSite:Q9ESU6
PaxDb:Q9ESU6 PRIDE:Q9ESU6 Ensembl:ENSMUST00000114475 GeneID:57261
KEGG:mmu:57261 EvolutionaryTrace:Q9ESU6 NextBio:313577 Bgee:Q9ESU6
CleanEx:MM_BRD4 Genevestigator:Q9ESU6 GermOnline:ENSMUSG00000024002
Uniprot:Q9ESU6
Length = 1400
Score = 154 (59.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K KR N R VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 154 (59.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K KR N R VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 144 (55.7 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 1328 PWDLEP-PKEGKEATEPGGSLPVEP--EEIQELLYHPRPDEWPQ-GDRDATCEKIITGLE 1383
P L P PK K S PV+P +++ + HP P++ + ++ C I+ +
Sbjct: 307 PPSLAPEPKTAKLGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMF 366
Query: 1384 EVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYL 1441
+ A PF PVD+ D++T++++ ++R YR DVR +
Sbjct: 367 AKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLM 426
Query: 1442 AANAEKFNEPHSNIVKYARIITDLL-LRIIKEPNPVDVPVV 1481
+N K+N P +V AR + D+ +R K P+ + PVV
Sbjct: 427 FSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVV 467
Score = 107 (42.7 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMD+ TI+ +L Y +F DV+ +F N YN
Sbjct: 376 PFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNP 435
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 436 PDH-EVVAMARKLQDVFEMRFAKM 458
Score = 63 (27.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
T++ R +N +Y D + N +N+P +IV A + L L+ I E
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINE 163
Score = 43 (20.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDP 1836
E+ E +++++ E + E K K L PK+ + + S + E K P
Sbjct: 541 EKDKKEKKKEKHKKKE-EVEENKKSKTKELPPKKTKKNNSSNSNVSKKEPVPTKTKP 596
Score = 41 (19.5 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
+S+S+S D +S + D+ E+ A++L L
Sbjct: 488 DSSSDSSSDSDSSTD-DSEEERAQRLAEL 515
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKK 1805
ES SES ++ ET+ + KK
Sbjct: 705 ESTSESSSSDSEDSETEMAPKSKKK 729
Score = 37 (18.1 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSE 1819
S+EDE+++ + + A++ + +++ Q+ E
Sbjct: 1298 SREDEDALEQARRAHEEARRRQEQQQQQQQQRQE 1331
>UNIPROTKB|B0V072 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0005737 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOVERGEN:HBG004896 OrthoDB:EOG4NZTT4
HGNC:HGNC:1103 ChiTaRS:BRD2 EMBL:CR759798 IPI:IPI00893552
SMR:B0V072 Ensembl:ENST00000416727 Ensembl:ENST00000424160
Uniprot:B0V072
Length = 613
Score = 145 (56.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 145 (56.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 114 (45.2 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 114 (45.2 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 108 (43.1 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 353 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 412
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 413 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459
Score = 68 (29.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 1747 DPEQPGP---STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENS--IPETDTTEQ 1801
+P +PGP ST+ +A +S EE E +EDE +D+ E+
Sbjct: 456 EPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEE 515
Query: 1802 PAKKLKVLYPKRR 1814
A +L L + R
Sbjct: 516 RAHRLAELQEQLR 528
Score = 67 (28.6 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 96 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 155
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 156 NKPTDDIVLMAQTLEKIFLQ 175
Score = 60 (26.2 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 175
Score = 41 (19.5 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 356 ILKELLSKKHAAYAWPFYKPVDASALG 382
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1319 DNNERENLSPWDLEPPKEGKEATEPGGSLPVEP 1351
D +++ +P +P K K + GGS + P
Sbjct: 570 DEDDKGPRAPRPPQPKKSKKASGSGGGSAALGP 602
>UNIPROTKB|O60885 [details] [associations]
symbol:BRD4 "Bromodomain-containing protein 4" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001833 "inner
cell mass cell proliferation" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043983 "histone H4-K12 acetylation" evidence=IEA] [GO:0044154
"histone H3-K14 acetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000114 "regulation of transcription
involved in G1 phase of mitotic cell cycle" evidence=IMP]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005737 GO:GO:0019048 GO:GO:0007059
GO:GO:0010971 GO:GO:0003677 GO:GO:0006468 GO:GO:0000790
GO:GO:0000114 GO:GO:0000794 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 PROSITE:PS51525
GO:GO:0001833 HOGENOM:HOG000231200 HOVERGEN:HBG004896 EMBL:AF386649
EMBL:Y12059 EMBL:AC004798 EMBL:AY166680 IPI:IPI00440727
IPI:IPI00440728 RefSeq:NP_055114.1 RefSeq:NP_490597.1
UniGene:Hs.187763 PDB:2I8N PDB:2LSP PDB:2NNU PDB:2OSS PDB:2OUO
PDB:2YEL PDB:2YEM PDB:3MXF PDB:3P5O PDB:3SVF PDB:3SVG PDB:3U5J
PDB:3U5K PDB:3U5L PDB:3UVW PDB:3UVX PDB:3UVY PDB:3UW9 PDB:3ZYU
PDB:4A9L PDB:4E96 PDB:4F3I PDB:4GPJ PDB:4HBV PDB:4HBW PDB:4HBX
PDB:4HBY PDBsum:2I8N PDBsum:2LSP PDBsum:2NNU PDBsum:2OSS
PDBsum:2OUO PDBsum:2YEL PDBsum:2YEM PDBsum:3MXF PDBsum:3P5O
PDBsum:3SVF PDBsum:3SVG PDBsum:3U5J PDBsum:3U5K PDBsum:3U5L
PDBsum:3UVW PDBsum:3UVX PDBsum:3UVY PDBsum:3UW9 PDBsum:3ZYU
PDBsum:4A9L PDBsum:4E96 PDBsum:4F3I PDBsum:4GPJ PDBsum:4HBV
PDBsum:4HBW PDBsum:4HBX PDBsum:4HBY ProteinModelPortal:O60885
SMR:O60885 DIP:DIP-39776N IntAct:O60885 MINT:MINT-1176376
STRING:O60885 PhosphoSite:O60885 PaxDb:O60885 PeptideAtlas:O60885
PRIDE:O60885 Ensembl:ENST00000263377 Ensembl:ENST00000371835
GeneID:23476 KEGG:hsa:23476 UCSC:uc002nar.3 UCSC:uc002nas.3
CTD:23476 GeneCards:GC19M015348 HGNC:HGNC:13575 HPA:HPA015055
MIM:608749 neXtProt:NX_O60885 PharmGKB:PA25416 InParanoid:O60885
KO:K11722 OMA:PVIRPPE OrthoDB:EOG45DWNS BindingDB:O60885
ChEMBL:CHEMBL1163125 ChiTaRS:BRD4 EvolutionaryTrace:O60885
GenomeRNAi:23476 NextBio:45817 PMAP-CutDB:O60885
ArrayExpress:O60885 Bgee:O60885 CleanEx:HS_BRD4
Genevestigator:O60885 GermOnline:ENSG00000141867 GO:GO:0044154
GO:GO:0043983 GO:GO:0043388 GO:GO:0032968 Uniprot:O60885
Length = 1362
Score = 154 (59.3 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K KR N R VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 154 (59.3 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K KR N R VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L + Y + + ++D +F N YN+ I +M L + + + L
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKINEL 164
Score = 142 (55.0 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 50/193 (25%), Positives = 82/193 (42%)
Query: 1300 IEGKPSPTKSPFLGYKILWDNNERENLSPW----DLEP-PKEGKEATEPGGSLPVEP--E 1352
I P P K+ G K D + P L P PK K S PV+P +
Sbjct: 275 IAATPQPVKTK-KGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKK 333
Query: 1353 EIQELLYHPRPDEWPQ-GDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXX 1411
++ + HP P++ + ++ C I+ + + A PF PVD+
Sbjct: 334 DVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDI 393
Query: 1412 XXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LR 1468
D++T++++ + R YR DVR + +N K+N P +V AR + D+ +R
Sbjct: 394 IKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 453
Query: 1469 IIKEPNPVDVPVV 1481
K P+ + PVV
Sbjct: 454 FAKMPDEPEEPVV 466
Score = 107 (42.7 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMD+ TI+ +L Y +F DV+ +F N YN
Sbjct: 375 PFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNP 434
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 435 PDH-EVVAMARKLQDVFEMRFAKM 457
Score = 63 (27.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
T++ R +N +Y D + N +N+P +IV A + L L+ I E
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINE 163
Score = 43 (20.2 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDP 1836
E+ E +++++ E + E K K PK+ + + S + E + +K P
Sbjct: 540 EKDKKEKKKEKHKRKE-EVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKP 595
Score = 41 (19.5 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKK 1805
ES+SES ++ ET+ + KK
Sbjct: 704 ESSSESSSSDSEDSETEMAPKSKKK 728
Score = 41 (19.5 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
+S+S+S D +S + D+ E+ A++L L
Sbjct: 487 DSSSDSSSDSDSSTD-DSEEERAQRLAEL 514
Score = 39 (18.8 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1782 SASESQEDENSIPETDT-TEQPAKKLKVLYPKR 1813
S SES + +S D+ TE K K +P R
Sbjct: 701 SESESSSESSSSDSEDSETEMAPKSKKKGHPGR 733
Score = 39 (18.8 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSE 1819
S+EDE+++ + + A++ + ++R +Q +
Sbjct: 1262 SREDEDALEQARRAHEEARRRQEQQQQQRQEQQQ 1295
>UNIPROTKB|B0V073 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0005737 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOGENOM:HOG000231200 HOVERGEN:HBG004896
HGNC:HGNC:1103 ChiTaRS:BRD2 EMBL:CR759798 IPI:IPI00894424
SMR:B0V073 Ensembl:ENST00000425201 Uniprot:B0V073
Length = 648
Score = 145 (56.1 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 145 (56.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 114 (45.2 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 114 (45.2 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 108 (43.1 bits), Expect = 8.0e-14, Sum P(3) = 8.0e-14
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 353 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 412
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 413 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459
Score = 68 (29.0 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 1747 DPEQPGP---STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENS--IPETDTTEQ 1801
+P +PGP ST+ +A +S EE E +EDE +D+ E+
Sbjct: 456 EPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEE 515
Query: 1802 PAKKLKVLYPKRR 1814
A +L L + R
Sbjct: 516 RAHRLAELQEQLR 528
Score = 67 (28.6 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 96 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 155
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 156 NKPTDDIVLMAQTLEKIFLQ 175
Score = 60 (26.2 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 175
Score = 41 (19.5 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 356 ILKELLSKKHAAYAWPFYKPVDASALG 382
Score = 38 (18.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1319 DNNERENLSPWDLEPPKEGKEATEPGGSLPVEP 1351
D +++ +P +P K K + GGS + P
Sbjct: 570 DEDDKGPRAPRPPQPKKSKKASGSGGGSAALGP 602
>UNIPROTKB|H9L005 [details] [associations]
symbol:LOC100859056 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000114 "regulation of transcription involved
in G1 phase of mitotic cell cycle" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043983 "histone
H4-K12 acetylation" evidence=IEA] [GO:0044154 "histone H3-K14
acetylation" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AADN02044714 EMBL:AADN02044715
EMBL:AADN02044716 EMBL:AADN02044717 EMBL:AADN02044718
EMBL:AADN02078896 Ensembl:ENSGALT00000021705 Uniprot:H9L005
Length = 578
Score = 153 (58.9 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 40/118 (33%), Positives = 62/118 (52%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 219
TI++ L + Y + + ++D +F N YN+ I +M L + + + +T
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKISEMT 165
Score = 153 (58.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 40/118 (33%), Positives = 62/118 (52%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 1634
TI++ L + Y + + ++D +F N YN+ I +M L + + + +T
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKISEMT 165
Score = 123 (48.4 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 39/153 (25%), Positives = 65/153 (42%)
Query: 1334 PKEGKEATEPGGSLPVEP--EEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVA 1391
PK K S PV+P +++ + H ++ C II + + A
Sbjct: 311 PKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYA 370
Query: 1392 EPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFN 1449
PF PVD+ DL+T++++ +NR YR DVR + +N K+N
Sbjct: 371 WPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYN 430
Query: 1450 EPHSNIVKYARIITDLL-LRIIKEPNPVDVPVV 1481
+V AR + D+ +R K P+ + PV+
Sbjct: 431 PADHEVVAMARKLQDVFEMRFAKMPDEPEEPVI 463
Score = 112 (44.5 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMDL TI+ +L Y +F DV+ +F N YN
Sbjct: 372 PFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNP 431
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 432 ADH-EVVAMARKLQDVFEMRFAKM 454
Score = 112 (44.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 137 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
PF KPVD L DY I+ PMDL TI+ +L Y +F DV+ +F N YN
Sbjct: 372 PFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNP 431
Query: 195 NKRSKIYIMTTRLSEFAEEHLRRL 218
++ M +L + E ++
Sbjct: 432 ADH-EVVAMARKLQDVFEMRFAKM 454
Score = 79 (32.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 35/156 (22%), Positives = 62/156 (39%)
Query: 1336 EGKEATEPG-GSLPVEPEEIQELLYHPRPDEW--PQGDRDATCE-----KIITGLEEVMG 1387
+G EAT+ +P++ + +P P E P + T + K++ L+ +
Sbjct: 19 DGLEATQMSTAQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVV--LKTLWK 76
Query: 1388 LSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANA 1445
A PF PVD + D+ T++ R +N +Y D + N
Sbjct: 77 HQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNC 136
Query: 1446 EKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVV 1481
+N+P +IV A + L L+ I E + +V
Sbjct: 137 YIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIV 172
Score = 66 (28.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVD 62
T++ R +N +Y D + N +N+P +IV A + L L+ I E +
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEE 168
Query: 63 VPVV 66
+V
Sbjct: 169 TEIV 172
>MGI|MGI:99495 [details] [associations]
symbol:Brd2 "bromodomain containing 2" species:10090 "Mus
musculus" [GO:0003682 "chromatin binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 MGI:MGI:99495 GO:GO:0005634
GO:GO:0005737 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
EMBL:AF100956 PROSITE:PS51525 CTD:6046 GeneTree:ENSGT00700000104261
HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP OrthoDB:EOG4NZTT4
ChiTaRS:BRD2 EMBL:AF045462 EMBL:AB010246 EMBL:AB010247
EMBL:AB010248 EMBL:AB212273 EMBL:D89801 EMBL:AL009226 EMBL:AK147918
EMBL:AK158970 EMBL:AK168525 EMBL:AK220444 EMBL:AF318183
IPI:IPI00622700 IPI:IPI00775910 RefSeq:NP_001191902.1
RefSeq:NP_034368.2 UniGene:Mm.3444 HSSP:P25440
ProteinModelPortal:Q7JJ13 SMR:Q7JJ13 STRING:Q7JJ13
PhosphoSite:Q7JJ13 PaxDb:Q7JJ13 PRIDE:Q7JJ13
Ensembl:ENSMUST00000025193 Ensembl:ENSMUST00000095347
Ensembl:ENSMUST00000114242 GeneID:14312 KEGG:mmu:14312
UCSC:uc008cbh.1 InParanoid:Q7JJ13 NextBio:285739 Bgee:Q7JJ13
CleanEx:MM_BRD2 Genevestigator:Q7JJ13 Uniprot:Q7JJ13
Length = 798
Score = 145 (56.1 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 64 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 124 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 183 EQELVVTIPKNSHK 196
Score = 145 (56.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 64 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 124 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 183 EQELVVTIPKNSHK 196
Score = 114 (45.2 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 333 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 391
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 392 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 446
Score = 114 (45.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 333 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 391
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 392 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 446
Score = 108 (43.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 352 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 411
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 412 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 458
Score = 69 (29.3 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 1747 DPEQPGP-STSYAEP---VASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQP 1802
+P +PGP S A P S+S EE E EDE +D+ E+
Sbjct: 455 EPLEPGPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEER 514
Query: 1803 AKKLKVLYPKRR 1814
A +L L + R
Sbjct: 515 AHRLAELQEQLR 526
Score = 67 (28.6 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 95 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 154
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 155 NKPTDDIVLMAQTLEKIFLQ 174
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 124 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 174
Score = 41 (19.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 355 ILKELLSKKHAAYAWPFYKPVDASALG 381
Score = 38 (18.4 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1696 PAGETKTKAESGNEQ 1710
P G TK+ +ES +E+
Sbjct: 469 PPGLTKSSSESSSEE 483
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 140 (54.3 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH SAV+ + F+ G +I +G+ D I LWR D K L+G I D+ +
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+ + + DKT+R W+++T I + H + CP G + S S DG W
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC--CPTR-RGPPLIISGSDDGTAKLW 166
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 39/156 (25%), Positives = 71/156 (45%)
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549
+I++G+DD KLW R + T +I+ ++ + + G VD +++W+L+
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Query: 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 609
L GHQ ITG++ P +G +YL + D + W + ++ V +
Sbjct: 212 GEATMTLEGHQDTITGMSLSP---DG-SYLLTNGMDNKLCVWDMRPYAPQNRCV----KI 263
Query: 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
F ++L S+SP G + GS D V ++
Sbjct: 264 FEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
Score = 127 (49.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 721 KIKVTMVAW-DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 779
K ++T V++ DA+D+ + T + +K+WD G+ L+GH + + + P D
Sbjct: 180 KYQITAVSFSDAADK-IFTG-GVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSP-DGSY 236
Query: 780 LLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT--TCALTDSY 835
LL+ G D + +WD+ + + R K F + E L WSPDGT T +D
Sbjct: 237 LLTNGMDNKLCVWDMRPYAPQNRCVKIFEGH-QHNFEKNLLKCSWSPDGTKVTAGSSDRM 295
Query: 836 GHL 838
H+
Sbjct: 296 VHI 298
Score = 82 (33.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 37/179 (20%), Positives = 70/179 (39%)
Query: 616 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675
P I SFS + TG D+ V+V+ + ++ + + E H D + + S
Sbjct: 178 PDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL---EGHQDTITGMSLSPDG 234
Query: 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 735
++ D +W + N C+ + + N + + +W + D
Sbjct: 235 SYLLTNGMDNKLCVWDMRPYA------PQNRCVKIFE--GHQHNFEKNLLKCSW-SPDGT 285
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
+TA + + + IWD + + L GHT V HP + ++ S D I + +I
Sbjct: 286 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEP-IIGSCSSDKNIYLGEI 343
Score = 60 (26.2 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G + + + L+A+G+ D+ I +W + VL GH+ I +++
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTS-- 106
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 605
+G + + S S D + W + I K H
Sbjct: 107 -DG-SQIVSASPDKTVRAWDVETGKQIKKMAEH 137
Score = 54 (24.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 646 KMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW--YYKCSQWRFIRLD 703
+ +++P+ +L H V +++++ + SGS D +W + C + ++
Sbjct: 38 RTSSLEAPIMLLS--GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGH 95
Query: 704 MNTCLP-H-TKETSDETNKKIKVTMVAWD 730
N L H T + S + T+ AWD
Sbjct: 96 KNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Score = 45 (20.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
API +L GH + + F P G +AS S D I W+
Sbjct: 44 APIMLLSGHPSAVYTMKFNPA---G-TLIASGSHDREIFLWR 81
>UNIPROTKB|P25440 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0005737 EMBL:CH471081
GO:GO:0007283 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
PROSITE:PS51525 CTD:6046 HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP
OrthoDB:EOG4NZTT4 EMBL:X62083 EMBL:M80613 EMBL:X96670 EMBL:D42040
EMBL:BX648109 EMBL:AL645941 EMBL:AL662845 EMBL:AL805913
EMBL:AL935042 EMBL:BX005422 EMBL:BX908719 EMBL:CR936909 EMBL:Z96104
EMBL:BC063840 IPI:IPI00014414 IPI:IPI00440502 PIR:A56619
RefSeq:NP_001106653.1 RefSeq:NP_001186384.1 RefSeq:NP_001186385.1
RefSeq:NP_005095.1 UniGene:Hs.75243 PDB:1X0J PDB:2DVQ PDB:2DVR
PDB:2DVS PDB:2DVV PDB:2E3K PDB:2G4A PDB:2YDW PDB:2YEK PDB:3AQA
PDB:3ONI PDB:4A9E PDB:4A9F PDB:4A9H PDB:4A9I PDB:4A9J PDB:4A9M
PDB:4A9N PDB:4A9O PDB:4AKN PDB:4ALG PDB:4ALH PDBsum:1X0J
PDBsum:2DVQ PDBsum:2DVR PDBsum:2DVS PDBsum:2DVV PDBsum:2E3K
PDBsum:2G4A PDBsum:2YDW PDBsum:2YEK PDBsum:3AQA PDBsum:3ONI
PDBsum:4A9E PDBsum:4A9F PDBsum:4A9H PDBsum:4A9I PDBsum:4A9J
PDBsum:4A9M PDBsum:4A9N PDBsum:4A9O PDBsum:4AKN PDBsum:4ALG
PDBsum:4ALH ProteinModelPortal:P25440 SMR:P25440 IntAct:P25440
STRING:P25440 PhosphoSite:P25440 DMDM:12230989 PaxDb:P25440
PRIDE:P25440 DNASU:6046 Ensembl:ENST00000374825
Ensembl:ENST00000374831 Ensembl:ENST00000383108
Ensembl:ENST00000395287 Ensembl:ENST00000395289
Ensembl:ENST00000399527 Ensembl:ENST00000399528
Ensembl:ENST00000399529 Ensembl:ENST00000414731
Ensembl:ENST00000436979 Ensembl:ENST00000438194
Ensembl:ENST00000442863 Ensembl:ENST00000448067
Ensembl:ENST00000449085 Ensembl:ENST00000449118
Ensembl:ENST00000547286 Ensembl:ENST00000547895
Ensembl:ENST00000549126 Ensembl:ENST00000549236
Ensembl:ENST00000550142 Ensembl:ENST00000552513
Ensembl:ENST00000552587 GeneID:6046 KEGG:hsa:6046 UCSC:uc003ocn.4
GeneCards:GC06P032944 HGNC:HGNC:1103 HPA:HPA042816 MIM:601540
neXtProt:NX_P25440 PharmGKB:PA25414 PhylomeDB:P25440
BindingDB:P25440 ChEMBL:CHEMBL1293289 ChiTaRS:BRD2
EvolutionaryTrace:P25440 GenomeRNAi:6046 NextBio:23557
ArrayExpress:P25440 Bgee:P25440 CleanEx:HS_BRD2
Genevestigator:P25440 GermOnline:ENSG00000204256 Uniprot:P25440
Length = 801
Score = 145 (56.1 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 145 (56.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 114 (45.2 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 114 (45.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 108 (43.1 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 353 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 412
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 413 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459
Score = 68 (29.0 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 1747 DPEQPGP---STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENS--IPETDTTEQ 1801
+P +PGP ST+ +A +S EE E +EDE +D+ E+
Sbjct: 456 EPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEE 515
Query: 1802 PAKKLKVLYPKRR 1814
A +L L + R
Sbjct: 516 RAHRLAELQEQLR 528
Score = 67 (28.6 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 96 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 155
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 156 NKPTDDIVLMAQTLEKIFLQ 175
Score = 60 (26.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 175
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 356 ILKELLSKKHAAYAWPFYKPVDASALG 382
Score = 38 (18.4 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1319 DNNERENLSPWDLEPPKEGKEATEPGGSLPVEP 1351
D +++ +P +P K K + GGS + P
Sbjct: 570 DEDDKGPRAPRPPQPKKSKKASGSGGGSAALGP 602
Score = 38 (18.4 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 970 RSRANGESSAAT--EGTSPSGTAPTAQNKNFVKRLP 1003
++ +G SAA G PSG + T K K P
Sbjct: 589 KASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAP 624
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 166 (63.5 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH +A+ V F GE + + A D LI +W A DG TL G S EISD+A + + L
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL 96
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + DKT+++W++++ + L GH + +F P N + S S D + W+
Sbjct: 97 VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS----NLIVSGSFDESVKIWEV 152
Query: 594 K 594
K
Sbjct: 153 K 153
Score = 150 (57.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 45/172 (26%), Positives = 80/172 (46%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V + +V+ +DD +K+W R GK L TL+G S + + + L+
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLI 138
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G+ D++++IW ++T + L H I+ VNF NG + + S S DG W
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNF---NCNG-SLIVSGSYDGLCRIWDA 194
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
+T+ E GN + FSP G ++ T + D+ ++++
Sbjct: 195 ASG-QCLRTLADE----------GNPPVSFVKFSPNGKYILTATLDNTLKLW 235
Score = 149 (57.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+ C F+P + +GS D V++++ V + + + HSD + ++ ++ + VS
Sbjct: 126 VFCCDFNPPSNLIVSGSFDESVKIWE---VKTGKCLKTLSAHSDPISAVNFNCNGSLIVS 182
Query: 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 740
GS DG IW Q CL + +DE N V+ V + + ++++TA
Sbjct: 183 GSYDGLCRIWDAASGQ----------CL---RTLADEGNPP--VSFVKFSPNGKYILTAT 227
Query: 741 NFNFQIKIWDAFNGDLVQVLKGHTNEVFVL-ESHPFDSRV-LLSAGHDGLIIIWDILSSK 798
N +K+WD G ++ GH NE + L S R ++S D ++ IW+ L +K
Sbjct: 228 LDN-TLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN-LQTK 285
Query: 799 Q 799
+
Sbjct: 286 E 286
Score = 97 (39.2 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 41/171 (23%), Positives = 76/171 (44%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+F+ G + +GS D R++ D +E + V +++S + ++ + D
Sbjct: 172 NFNCNGSLIVSGSYDGLCRIW--DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLD 229
Query: 685 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDR-WVITAINFN 743
T +W Y S+ R CL K + N+K + ++ + R WV++ N
Sbjct: 230 NTLKLWDY--SRGR--------CL---KTYTGHKNEKYCL-FASFSVTGRKWVVSGSEDN 275
Query: 744 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAG--HDGLIIIW 792
+ IW+ ++VQ L+GHT+ V HP ++ SA +D I +W
Sbjct: 276 M-VYIWNLQTKEIVQRLQGHTDVVISAACHP-TKNIIASAALENDKTIKVW 324
Score = 70 (29.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/138 (23%), Positives = 54/138 (39%)
Query: 510 LLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFC 569
L TL G S IS + LA+ D I IW L GH I+ V +
Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90
Query: 570 PLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629
+ + L S S D + W D+ K + + ++ + + C F+P
Sbjct: 91 ----SDSSRLVSASDDKTLKVW----DMRSGKCL--------KTLKGHSDFVFCCDFNPP 134
Query: 630 GLFLATGSGDHHVRVYKM 647
+ +GS D V+++++
Sbjct: 135 SNLIVSGSFDESVKIWEV 152
>UNIPROTKB|H0Y5B5 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
GO:GO:0003677 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AC104446 HGNC:HGNC:30064 ChiTaRS:PBRM1
EMBL:AC112215 ProteinModelPortal:H0Y5B5 Ensembl:ENST00000446103
Bgee:H0Y5B5 Uniprot:H0Y5B5
Length = 1085
Score = 179 (68.1 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 58/251 (23%), Positives = 111/251 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 345 GQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 404
Query: 1447 KFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQ 1506
++N P+S I Y R+ L L+ + + ++ + +++ R+
Sbjct: 405 RYNVPNSAI--YKRV---LKLQQVMQAKKKEL--ARRDDIEDGDSMISSATSDTGSAKRK 457
Query: 1507 RRVRPTAVTRAQR----EAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDH 1562
R + + +R + + ++++K FN E RE +C + F K D+
Sbjct: 458 RNTHDSEMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDY 514
Query: 1563 PDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRL 1622
PDY KI++ PMDL I +R D Y ++D+K +F N+R+YN+ + S++Y L
Sbjct: 515 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVYNDAHIL 573
Query: 1623 SEFAEEHLRRL 1633
+ +E + L
Sbjct: 574 EKLLKEKRKEL 584
Score = 177 (67.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 53/222 (23%), Positives = 104/222 (46%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L +R + +N+ Y + + D+ + NA+++N P+S I Y R+ L L+ + +
Sbjct: 374 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRV---LKLQQVMQAKK 428
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQR----EAMNQKKLKRPF 116
++ + +++ R+R + + +R + + ++++K F
Sbjct: 429 KEL--ARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKILF 486
Query: 117 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPI 176
N E RE +C + F K D+PDY KI++ PMDL I +R D Y
Sbjct: 487 NVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEE 543
Query: 177 DFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
++D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 544 GMIEDMKLMFRNARHYNE-EGSQVYNDAHILEKLLKEKRKEL 584
Score = 106 (42.4 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 149 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 208
Score = 106 (42.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 149 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 208
Score = 100 (40.3 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 349 AEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 407
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 408 V-PNSAIYKRVLKLQQVMQAKKKELARR 434
Score = 88 (36.0 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 173 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 220
Score = 84 (34.6 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 601 SRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK 660
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
PMD+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 661 KPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 719
Query: 1631 RRLTVRWNSH 1640
R L +SH
Sbjct: 720 RDLEGDEDSH 729
Score = 82 (33.9 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 174 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 220
Score = 81 (33.6 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N+++Y
Sbjct: 14 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 70
Score = 61 (26.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 664 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 723
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 724 GDEDSHVPNVTLLIQELIHN 743
Score = 56 (24.8 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 526 DLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELG 585
Query: 1475 PV 1476
P+
Sbjct: 586 PL 587
Score = 44 (20.5 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 38 LMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNE 94
Score = 44 (20.5 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 753 DDEGRCYSDSLAEIPAVDPN 772
Score = 43 (20.2 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q + + A + N S I + A + ++I E
Sbjct: 784 IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 837
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 557 RHYNEEGSQVYNDAHI 572
Score = 39 (18.8 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1239 LAVMKPNG--KLTNEFFNIKYHDMPDVIDFFVL 1269
L + KP K+ + KY D+ +++ FV+
Sbjct: 657 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVM 689
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 218 (81.8 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 63/221 (28%), Positives = 107/221 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH ++ + F K G+ +V+G+ D + LW G+ L G ++ + +
Sbjct: 386 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFI 444
Query: 534 AAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
AAG++DK IRIW TL + L GH+ + V F P +G YL S S D I W+
Sbjct: 445 AAGSLDKVIRIWTSSGTL--VEQLHGHEESVYSVAFSP---DG-KYLVSGSLDNTIKLWE 498
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ +++ +++ E + + IL + SP G ++ +GS D ++ + D S
Sbjct: 499 LQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPD---S 555
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693
P L ++ H++ V S+ S + F +GS D A IW Y+
Sbjct: 556 PHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 113 (44.8 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 40/149 (26%), Positives = 63/149 (42%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
FSP G F+A GS D +R++ G L + ++ H + V S+ +S VSGS D
Sbjct: 437 FSPDGQFIAAGSLDKVIRIWTSSGT---L-VEQLHGHEESVYSVAFSPDGKYLVSGSLDN 492
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W +C + M K+T T K + V +W+I+ +
Sbjct: 493 TIKLWELQCVS--NVAPSMYKEGGICKQTF--TGHKDFILSVTVSPDGKWIISGSK-DRT 547
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHP 774
I+ W + L+GH N V + P
Sbjct: 548 IQFWSPDSPHSQLTLQGHNNSVISVAVSP 576
Score = 99 (39.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 615 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS 674
R G+ ++ +FSP G +LATG D +R++ D + L + H ++ S+ +S
Sbjct: 343 REGDLYVRSVAFSPDGKYLATGVEDQQIRIW--DIAQKRVYRL-LTGHEQEIYSLDFSKD 399
Query: 675 HLRFVSGSRDGTALIWYYKCSQWRFI 700
VSGS D T +W + + + I
Sbjct: 400 GKTLVSGSGDRTVCLWDVEAGEQKLI 425
Score = 92 (37.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 35/139 (25%), Positives = 59/139 (42%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE------ISDIAI 526
L H S + V F G+ + TG + + ++ GKL+ L+ S + + +A
Sbjct: 296 LEHTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAF 354
Query: 527 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
LA G D+ IRIW++ +L GH+ I ++F +G L S S D
Sbjct: 355 SPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSK---DG-KTLVSGSGDR 410
Query: 587 CIGFWKYKLDIDISKTVFH 605
+ W ++ K + H
Sbjct: 411 TVCLWD--VEAGEQKLILH 427
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
VT V + + D I A + + I+IW + +G LV+ L GH V+ + P D + L+S
Sbjct: 432 VTTVMF-SPDGQFIAAGSLDKVIRIWTS-SGTLVEQLHGHEESVYSVAFSP-DGKYLVSG 488
Query: 784 GHDGLIIIWDI 794
D I +W++
Sbjct: 489 SLDNTIKLWEL 499
>UNIPROTKB|Q5TJG6 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9615
"Canis lupus familiaris" [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0005737 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
PROSITE:PS51525 CTD:6046 GeneTree:ENSGT00700000104261
HOGENOM:HOG000231200 HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP
OrthoDB:EOG4NZTT4 EMBL:AJ630365 RefSeq:NP_001041552.1
UniGene:Cfa.1287 ProteinModelPortal:Q5TJG6 SMR:Q5TJG6 PRIDE:Q5TJG6
Ensembl:ENSCAFT00000001379 Ensembl:ENSCAFT00000043351 GeneID:474868
KEGG:cfa:474868 InParanoid:Q5TJG6 NextBio:20850812 Uniprot:Q5TJG6
Length = 803
Score = 145 (56.1 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 145 (56.1 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 114 (45.2 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 114 (45.2 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 108 (43.1 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 353 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 412
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 413 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459
Score = 67 (28.6 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 96 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 155
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 156 NKPTDDIVLMAQTLEKIFLQ 175
Score = 66 (28.3 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 1747 DPEQPGP---STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPET---DTTE 1800
+P +PGP ST+ +A +S EE E +E+E E+ D+ E
Sbjct: 456 EPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEDEEEDEEEEEEEEESESSDSEE 515
Query: 1801 QPAKKLKVLYPKRR 1814
+ A +L L + R
Sbjct: 516 ERAHRLAELQEQLR 529
Score = 60 (26.2 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 175
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 356 ILKELLSKKHAAYAWPFYKPVDASALG 382
Score = 40 (19.1 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1800 EQPAKKLKVLYPKRRGQQS--EDGSGDNASEMSELKQ 1834
E+ KK K K RG+ ED G A S+ K+
Sbjct: 551 EKKEKKKKRKAEKHRGRAGVDEDDKGSRAPRPSQPKK 587
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 971 SRANGESSAATEGTSPSGTAP 991
S+ GE +A G P AP
Sbjct: 9 SKLPGEGNAGLLGLGPEAAAP 29
Score = 38 (18.4 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 1319 DNNERENLSPWDLEPPKEGKEATEPGGS 1346
D +++ + +P +P K K + GGS
Sbjct: 571 DEDDKGSRAPRPSQPKKSKKASGSGGGS 598
>UNIPROTKB|A5D9K6 [details] [associations]
symbol:BRD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0005737
GO:GO:0006357 GO:GO:0003682 GO:GO:0006334 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
CTD:6046 GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 KO:K08871 OMA:PVSTAMP OrthoDB:EOG4NZTT4
EMBL:CU618315 EMBL:BX324144 RefSeq:NP_001116557.1 UniGene:Ssc.20953
ProteinModelPortal:A5D9K6 SMR:A5D9K6 Ensembl:ENSSSCT00000001637
GeneID:100141307 KEGG:ssc:100141307 Uniprot:A5D9K6
Length = 803
Score = 145 (56.1 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 145 (56.1 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 114 (45.2 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 114 (45.2 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 108 (43.1 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 353 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 412
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 413 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459
Score = 67 (28.6 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 96 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 155
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 156 NKPTDDIVLMAQTLEKIFLQ 175
Score = 66 (28.3 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 1747 DPEQPGP---STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPET---DTTE 1800
+P +PGP ST+ +A +S EE E +E+E E+ D+ E
Sbjct: 456 EPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEEEEEEEEESESSDSEE 515
Query: 1801 QPAKKLKVLYPKRR 1814
+ A +L L + R
Sbjct: 516 ERAHRLAELQEQLR 529
Score = 60 (26.2 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 175
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 356 ILKELLSKKHAAYAWPFYKPVDASALG 382
Score = 39 (18.8 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1800 EQPAKKLKVLYPKRRGQQS--EDGSGDNASEMSELKQ 1834
E+ KK K K RG+ ED G A S+ K+
Sbjct: 551 EKKEKKKKRKAEKHRGRAGGDEDDKGPRAPRPSQPKK 587
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 971 SRANGESSAATEGTSPSGTAP 991
S+ GE +A G P AP
Sbjct: 9 SKLPGEGNAGLLGLGPEAAAP 29
>UNIPROTKB|H9L2H3 [details] [associations]
symbol:LOC100859056 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000114 "regulation of transcription involved
in G1 phase of mitotic cell cycle" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043983 "histone
H4-K12 acetylation" evidence=IEA] [GO:0044154 "histone H3-K14
acetylation" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AADN02044714 EMBL:AADN02044715
EMBL:AADN02044716 EMBL:AADN02044717 EMBL:AADN02044718
EMBL:AADN02078896 Ensembl:ENSGALT00000035893 OMA:SCEDEDV
Uniprot:H9L2H3
Length = 859
Score = 153 (58.9 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 40/118 (33%), Positives = 62/118 (52%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 219
TI++ L + Y + + ++D +F N YN+ I +M L + + + +T
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKISEMT 165
Score = 153 (58.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/118 (33%), Positives = 62/118 (52%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K KR N + VL+TLW + PF++PVD KL+ PDY KI+ PMD+G
Sbjct: 49 ETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 108
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLT 1634
TI++ L + Y + + ++D +F N YN+ I +M L + + + +T
Sbjct: 109 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK-PGDDIVLMAEALEKLFLQKISEMT 165
Score = 123 (48.4 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 39/153 (25%), Positives = 65/153 (42%)
Query: 1334 PKEGKEATEPGGSLPVEP--EEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVA 1391
PK K S PV+P +++ + H ++ C II + + A
Sbjct: 311 PKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYA 370
Query: 1392 EPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFN 1449
PF PVD+ DL+T++++ +NR YR DVR + +N K+N
Sbjct: 371 WPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYN 430
Query: 1450 EPHSNIVKYARIITDLL-LRIIKEPNPVDVPVV 1481
+V AR + D+ +R K P+ + PV+
Sbjct: 431 PADHEVVAMARKLQDVFEMRFAKMPDEPEEPVI 463
Score = 112 (44.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMDL TI+ +L Y +F DV+ +F N YN
Sbjct: 372 PFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNP 431
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 432 ADH-EVVAMARKLQDVFEMRFAKM 454
Score = 79 (32.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 35/156 (22%), Positives = 62/156 (39%)
Query: 1336 EGKEATEPG-GSLPVEPEEIQELLYHPRPDEW--PQGDRDATCE-----KIITGLEEVMG 1387
+G EAT+ +P++ + +P P E P + T + K++ L+ +
Sbjct: 19 DGLEATQMSTAQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVV--LKTLWK 76
Query: 1388 LSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANA 1445
A PF PVD + D+ T++ R +N +Y D + N
Sbjct: 77 HQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNC 136
Query: 1446 EKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVV 1481
+N+P +IV A + L L+ I E + +V
Sbjct: 137 YIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIV 172
Score = 39 (18.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 882 LPPHLMPPP 890
+PPHL PP
Sbjct: 830 MPPHLPQPP 838
Score = 37 (18.1 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 971 SRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQH 1007
S + ESS++ S +G P + + V P H
Sbjct: 701 SESTSESSSSDSEDSETGFQPRVRTSHHVS--PFHHH 735
Score = 37 (18.1 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 12/49 (24%), Positives = 18/49 (36%)
Query: 1125 PPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDWLAEVVPKKAPYYP 1173
PP + + P Q P+QL P+ P P + P+ P
Sbjct: 749 PPPQPPQQPPPPPPQQLQPQQLQPQPPPPPPVPPQAPPPMKSSPPPFVP 797
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 172 (65.6 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 68/267 (25%), Positives = 113/267 (42%)
Query: 427 SLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNL--GHLSAVFCVLF 484
S LV K + RS + + R L ++SN + + + H+ + V
Sbjct: 42 SALVEEIQKAEPLITASRSDQVKLLIQR-LQNKLGQHSNHKFYLFKVLRAHILPLTNVAL 100
Query: 485 DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR-NILLAAGTVDKTIR 543
+K G +TG+ D KLW G+ L TL G + IA +N +A G+ DKT +
Sbjct: 101 NKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
Query: 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+W+++T GH I ++F P +A+ S D W DI + V
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQST----LVATGSMDTTAKLW----DIQSGEEV 212
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663
F + +A I+ SF+ G + TGS DH V V++ D+ + + H
Sbjct: 213 F--------TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE---ADTGRKVYTLIGHC 261
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIW 690
++ S ++ ++GS D T +W
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLW 288
Score = 168 (64.2 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
R+ Y +GH + + +F+ +I+TG+ D KLW A +GK +ATL G EI D
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF 311
Query: 527 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
D L+A + D T RI++ T ++ L GH+G I+ ++F P G N L + S+D
Sbjct: 312 DYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP---QG-NRLLTGSSDK 367
Query: 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 646
W + + H +F+ C+ F+ G + TGS D+ R+++
Sbjct: 368 TARIWDAQTGQCLQVLEGHTDEIFS-----------CA-FNYKGDIIITGSKDNTCRIWR 415
Score = 146 (56.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + + F+ G I+TG+ D + +W A G+ + TL G EIS + L+
Sbjct: 217 GHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLI 276
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
G++DKT ++W+ ++ L GH I ++ C + G +A+ S DG +
Sbjct: 277 LTGSMDKTCKLWDAVNGKCVATLTGHDDEI--LDSC-FDYTG-KLIATASADGTARIFSA 332
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
++K HE I SF+P G L TGS D R++
Sbjct: 333 ATRECVTKLEGHE------------GEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 144 (55.7 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 63/284 (22%), Positives = 118/284 (41%)
Query: 308 ELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWEGATHSQTLAE-VASSHPNVTA 366
+L L+++Y G E K + ++ K++ + D + +T L E + + P +TA
Sbjct: 2 KLKSLLLRYYPPGIMLEYEK--SGQLKTKSI--DLLDLDPSTDVSALVEEIQKAEPLITA 57
Query: 367 SFLPKI---CQRLGPLLDKELKPNFPXXXXXXXXXX-XXXXXXEKSLAKSVLSSYDYIAR 422
S ++ QRL L + F KS + + SYD +
Sbjct: 58 SRSDQVKLLIQRLQNKLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCK 117
Query: 423 QHGTSLLVP-NSVKVHNTVNVLRSREYSGPLSRSLMISSH-KYSNL------RQHYVNLG 474
T+ ++++ H NV+ + ++ P + S K L + ++ G
Sbjct: 118 LWDTASGEELHTLEGHR--NVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRG 175
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 534
H + + C+ F+ ++ TG+ D KLW + G+ + TL G S EI ++ + +
Sbjct: 176 HTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRII 235
Query: 535 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF---CPLEVNG 575
G+ D T+ +W T + L+GH I+ F C L + G
Sbjct: 236 TGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTG 279
Score = 88 (36.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEV-EEHSDKVDSIQWSHSHLRFVSGS 682
SF+P G L TGS D R++ D+ G L+V E H+D++ S +++ ++GS
Sbjct: 352 SFNPQGNRLLTGSSDKTARIW-----DAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGS 406
Query: 683 RDGTALIW 690
+D T IW
Sbjct: 407 KDNTCRIW 414
Score = 87 (35.7 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 747 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+IWDA G +QVL+GHT+E+F + + ++++ D IW
Sbjct: 370 RIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGDIIITGSKDNTCRIW 414
Score = 81 (33.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 721 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES-HPFDSRV 779
+I + WD S ++T + + K+WDA NG V L GH +E+ L+S + ++
Sbjct: 263 EISSAVFNWDCS--LILTG-SMDKTCKLWDAVNGKCVATLTGHDDEI--LDSCFDYTGKL 317
Query: 780 LLSAGHDG 787
+ +A DG
Sbjct: 318 IATASADG 325
Score = 80 (33.2 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
IL S F G +AT S D R++ + + ++E H ++ I ++ R ++
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATREC---VTKLEGHEGEISKISFNPQGNRLLT 362
Query: 681 GSRDGTALIW 690
GS D TA IW
Sbjct: 363 GSSDKTARIW 372
Score = 62 (26.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 729 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGL 788
+D + + + TA + + +I+ A + V L+GH E+ + +P +R LL+ D
Sbjct: 311 FDYTGKLIATA-SADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR-LLTGSSDKT 368
Query: 789 IIIWD 793
IWD
Sbjct: 369 ARIWD 373
Score = 44 (20.5 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678
A I + F+ + TGS D +++ D V+ + + H D++ + ++
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLW--DAVNGKC-VATLTGHDDEILDSCFDYTGKLI 318
Query: 679 VSGSRDGTALIW 690
+ S DGTA I+
Sbjct: 319 ATASADGTARIF 330
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 150 (57.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 49/190 (25%), Positives = 85/190 (44%)
Query: 507 DG-KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ----TLAPISVLVGHQG 561
DG ++ L G + + + + LA G D T+R+WNL I V GH
Sbjct: 352 DGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTA 411
Query: 562 IITGVNFCPLEVNGF-NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 620
+T V PL+VNG+ +LAS+S D + ++ L ++K+ F ++ I+ +
Sbjct: 412 SVTAVALGPLDVNGYPTFLASSSQDRTLK--RFNLGSQLNKSDFSNRAVWT--IKAHDRD 467
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+ S G +A+ S D ++++ +G+L H V + ++ + S
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWD-SSTGEVVGVLR--GHRRGVWACSFNPFSRQLAS 524
Query: 681 GSRDGTALIW 690
GS D T IW
Sbjct: 525 GSGDRTIRIW 534
Score = 147 (56.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 50/189 (26%), Positives = 84/189 (44%)
Query: 458 ISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGC 517
++ +SN R + H V + K G +I + + D IKLW + G+++ LRG
Sbjct: 448 LNKSDFSN-RAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGH 506
Query: 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 577
+ + + + LA+G+ D+TIRIWN+ T + L GH G I + + ++
Sbjct: 507 RRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIY----ISQGT 562
Query: 578 YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 637
+ S + DG + W ++ HE +R+ L S F G L +G
Sbjct: 563 QVVSAAADGLVKVWSLSSGECVATLDNHE-----DRV-----WALASRFD--GSLLVSGG 610
Query: 638 GDHHVRVYK 646
D V V+K
Sbjct: 611 ADAVVSVWK 619
Score = 144 (55.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 454 RSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT 513
RS +++ ++ + R+ H + V + D ++ TG + L+K+W + +
Sbjct: 81 RSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHS 140
Query: 514 LRGCSGEISDIAID-NRNI-LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 571
RG G IS + ++N +LA+G D +R+W+L + ++V GH +I G+ F P
Sbjct: 141 FRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEP- 199
Query: 572 EVNGFNYLASTSTDGCIGFWKYKLDIDISKT-VFH 605
G ++L S S D + W K + VFH
Sbjct: 200 --TG-SFLLSGSRDKTVQVWNIKKRSAVRTIPVFH 231
Score = 130 (50.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV-EEHSDKVDSIQWS----HSH 675
+L S G++LATG+ D+ VR++ ++ D+ + V H+ V ++ + +
Sbjct: 367 VLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGY 426
Query: 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 735
F++ S L + SQ + D + T + D I+V+ D
Sbjct: 427 PTFLASSSQDRTLKRFNLGSQLN--KSDFSNRAVWTIKAHDRDVNAIQVS------KDGR 478
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
+I + + + IK+WD+ G++V VL+GH V+ +PF SR L S D I IW++
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPF-SRQLASGSGDRTIRIWNV 536
Score = 120 (47.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 44/181 (24%), Positives = 74/181 (40%)
Query: 474 GHLSAVFCVLFDKLGE--VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
GH + + F K V+ +GADD ++LW + +A G S I + +
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGS 202
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVL-VGHQGIITG-VNFCPLEVNGFNYLASTSTDGCIG 589
L +G+ DKT+++WN++ + + + V H G VN P E Y A
Sbjct: 203 FLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEK--ILYTAGEGNLILAW 260
Query: 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG-SGDHHVRVYKMD 648
WK +D H ++ P + + L S S L L G+ + + K++
Sbjct: 261 DWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLRKRVPGEGFITIKKLN 320
Query: 649 G 649
G
Sbjct: 321 G 321
Score = 109 (43.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 54/232 (23%), Positives = 98/232 (42%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR--DG--KLLATLRGCSGEISDIAIDNR 529
GH V + + G + TGA D ++LW D K + G + ++ +A+
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPL 421
Query: 530 NI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIIT------GVNFCPLEVNGFNY 578
++ LA+ + D+T++ +NL + S ++ + T VN + +G
Sbjct: 422 DVNGYPTFLASSSQDRTLKRFNLGSQLNKSDF-SNRAVWTIKAHDRDVNAIQVSKDG-RI 479
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638
+AS S D I W D + V V+ R + SF+P LA+GSG
Sbjct: 480 IASASQDKTIKLW----DSSTGEVV---GVLRGHR-----RGVWACSFNPFSRQLASGSG 527
Query: 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
D +R++ VD+ + +E H+ + + + + VS + DG +W
Sbjct: 528 DRTIRIWN---VDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
Score = 107 (42.7 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 35/150 (23%), Positives = 73/150 (48%)
Query: 499 LIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVG 558
L+ ++ G+ + +++ + + ID N LLA G + +++W++ G
Sbjct: 84 LLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRG 143
Query: 559 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618
H G+I+ + F + N + LAS + D + W D++ S+++ +F G+
Sbjct: 144 HGGVISALCFGKHQ-NTW-VLASGADDSRVRLW----DLNSSRSM----AVFE-----GH 188
Query: 619 AHILCS-SFSPGGLFLATGSGDHHVRVYKM 647
+ ++ +F P G FL +GS D V+V+ +
Sbjct: 189 SSVIRGLTFEPTGSFLLSGSRDKTVQVWNI 218
Score = 91 (37.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+K+W +G+ V L H + V+ L S FD +L+S G D ++ +W
Sbjct: 573 VKVWSLSSGECVATLDNHEDRVWALASR-FDGSLLVSGGADAVVSVW 618
Score = 79 (32.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798
I+IW+ VQ L+GHT + L ++V+ SA DGL+ +W + S +
Sbjct: 531 IRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVV-SAAADGLVKVWSLSSGE 582
Score = 68 (29.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 728 AWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG 787
AW D + + N F I + + VL+GHT+ V L+S D L + D
Sbjct: 330 AWIGDDHLAVCS-NTEF-IDVISTDGTQVFGVLEGHTDIVLTLDSSE-DGVWLATGAKDN 386
Query: 788 LIIIWDILSSKQRGYKWFH 806
+ +W+ L+ + YK H
Sbjct: 387 TVRLWN-LNIEDNVYKCIH 404
>UNIPROTKB|Q32S26 [details] [associations]
symbol:BRD2 "Bromodomain-containing protein 2" species:9913
"Bos taurus" [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0005737
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359 PROSITE:PS51525
EMBL:AY957499 IPI:IPI00687961 RefSeq:NP_001039331.1
UniGene:Bt.33281 ProteinModelPortal:Q32S26 SMR:Q32S26 STRING:Q32S26
PRIDE:Q32S26 Ensembl:ENSBTAT00000014704 GeneID:505358
KEGG:bta:505358 CTD:6046 GeneTree:ENSGT00700000104261
HOGENOM:HOG000231200 HOVERGEN:HBG004896 InParanoid:Q32S26 KO:K08871
OMA:PVSTAMP OrthoDB:EOG4NZTT4 NextBio:20867105 Uniprot:Q32S26
Length = 803
Score = 145 (56.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 212
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 213 EHLRRLTVRWNSHK 226
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 145 (56.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 65 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF---------AE 1627
TI+ L + Y + + ++D +F N YN+ I +M L + E
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 1628 EHLRRLTVRWNSHK 1641
E +T+ NSHK
Sbjct: 184 EQELVVTIPKNSHK 197
Score = 114 (45.2 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 1571
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 1572 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 102 AQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIA 156
+Q++ + KK K K+ C +L+ L + PF KPVD L DY I+
Sbjct: 334 SQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 392
Query: 157 PMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
PMDL T++ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 393 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 447
Score = 108 (43.1 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C I+ L + A PF PVD S DL+T++ + +NR YR
Sbjct: 353 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQ 412
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + +N K+N P ++V AR + D+ R K P+ P++
Sbjct: 413 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459
Score = 67 (28.6 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 96 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY 155
Query: 1449 NEPHSNIVKYARIITDLLLR 1468
N+P +IV A+ + + L+
Sbjct: 156 NKPTDDIVLMAQTLEKIFLQ 175
Score = 63 (27.2 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 1747 DPEQPGP---STSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPET---DTTE 1800
+P +PGP ST+ +A +S EE E +++E E+ D+ E
Sbjct: 456 EPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEEEESESSDSEE 515
Query: 1801 QPAKKLKVLYPKRR 1814
+ A +L L + R
Sbjct: 516 ERAHRLAELQEQLR 529
Score = 60 (26.2 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLR 53
T++ R +N +Y + D + N +N+P +IV A+ + + L+
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQ 175
Score = 41 (19.5 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQGEG 815
I+ ++LS K Y W F+ V+ G
Sbjct: 356 ILKELLSKKHAAYAWPFYKPVDASALG 382
Score = 41 (19.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 970 RSRANGESSAAT---EGTSPSGTAPTAQNKNFVKRLP 1003
++ G S AAT G PSG T K K P
Sbjct: 590 KAGGGGSSGAATLGPPGFGPSGGGATKLPKKATKTAP 626
Score = 39 (18.8 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1800 EQPAKKLKVLYPKRRGQQS--EDGSGDNASEMSELKQ 1834
E+ KK K K RG+ ED G A S+ K+
Sbjct: 551 EKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPSQPKK 587
>ZFIN|ZDB-GENE-010501-3 [details] [associations]
symbol:pbrm1l "polybromo 1, like" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 ZFIN:ZDB-GENE-010501-3 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00390000003017 EMBL:BX546446 EMBL:BX649498
IPI:IPI00993768 Ensembl:ENSDART00000131203 Uniprot:E7EZ71
Length = 1648
Score = 130 (50.8 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 1555 KPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSK 1614
KP+ K D+PDY KI+ PMD+ TI +R + Y + ++D+K +F N+R+YN+ + S+
Sbjct: 525 KPLKK-DYPDYYKIIQDPMDMRTIENNIRTERYNNEDALMEDMKLMFRNARHYNE-EGSQ 582
Query: 1615 IYIMTTRLSEFAEEHLRRL 1633
+Y L + ++ + L
Sbjct: 583 VYNDANVLEKMVKDKQKEL 601
Score = 130 (50.8 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 140 KPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSK 199
KP+ K D+PDY KI+ PMD+ TI +R + Y + ++D+K +F N+R+YN+ + S+
Sbjct: 525 KPLKK-DYPDYYKIIQDPMDMRTIENNIRTERYNNEDALMEDMKLMFRNARHYNE-EGSQ 582
Query: 200 IYIMTTRLSEFAEEHLRRL 218
+Y L + ++ + L
Sbjct: 583 VYNDANVLEKMVKDKQKEL 601
Score = 116 (45.9 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 113 KRPFNW-KNECREVLETLWVCPDS------EPFRKPVDKLDHPDYDKIVIAPMDLGTIRE 165
+RP ++ K ++LE + C DS E F+K KL +PDY ++ P+DL + +
Sbjct: 178 ERPPSYLKAILEQLLEAIASCTDSSGRLVSELFQKLPSKLHYPDYYAVIKEPIDLRAVAQ 237
Query: 166 ELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
+++G +Y+S KD+ + N++ YN+
Sbjct: 238 KIQGGHYKSISAMAKDIDLLVKNAKTYNE 266
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 1528 KRPFNW-KNECREVLETLWVCPDS------EPFRKPVDKLDHPDYDKIVIAPMDLGTIRE 1580
+RP ++ K ++LE + C DS E F+K KL +PDY ++ P+DL + +
Sbjct: 178 ERPPSYLKAILEQLLEAIASCTDSSGRLVSELFQKLPSKLHYPDYYAVIKEPIDLRAVAQ 237
Query: 1581 ELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
+++G +Y+S KD+ + N++ YN+
Sbjct: 238 KIQGGHYKSISAMAKDIDLLVKNAKTYNE 266
Score = 113 (44.8 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SEPF + + ++PDY + P+ L IRE+++ +YE+ D+ +F N+R YN
Sbjct: 384 SEPFLQLPSRREYPDYYHQIKNPISLQQIREKMKNGDYEAVEQIEADLSVMFENARRYNM 443
Query: 195 NKRSKIYIMTTRLSEFAEEHLRR 217
S IY RL ++ +R
Sbjct: 444 -PNSTIYKRAQRLQLIMQQQKKR 465
Score = 113 (44.8 bits), Expect = 4.5e-06, Sum P(5) = 4.5e-06
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
SEPF + + ++PDY + P+ L IRE+++ +YE+ D+ +F N+R YN
Sbjct: 384 SEPFLQLPSRREYPDYYHQIKNPISLQQIREKMKNGDYEAVEQIEADLSVMFENARRYNM 443
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRR 1632
S IY RL ++ +R
Sbjct: 444 -PNSTIYKRAQRLQLIMQQQKKR 465
Score = 87 (35.7 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 1369 GDRDATCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
GD + + G V GL ++EPFL + L +R + +N Y
Sbjct: 362 GDPILLLYQAVRGARSVQGLLLSEPFLQLPSRREYPDYYHQIKNPISLQQIREKMKNGDY 421
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYAR 1460
+ + D+ + NA ++N P+S I K A+
Sbjct: 422 EAVEQIEADLSVMFENARRYNMPNSTIYKRAQ 453
Score = 86 (35.3 bits), Expect = 4.5e-06, Sum P(5) = 4.5e-06
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
E F + + + PDY +IV P+D+ I+++LR + Y+ F D + +N++ Y Q
Sbjct: 69 ELFVRAPKRRNQPDYYEIVSQPIDMMKIQQKLRAEEYQDVEQFSADFHLLINNTKAYYQ 127
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(5) = 4.5e-06
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL + + Q Y+ I++ D+ L NA+ +NEP S + K A I
Sbjct: 231 DLRAVAQKIQGGHYKSISAMAKDIDLLVKNAKTYNEPGSQVFKDANTI 278
Score = 68 (29.0 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L + + Q Y+ I++ D+ L NA+ +NEP S + K A I
Sbjct: 232 LRAVAQKIQGGHYKSISAMAKDIDLLVKNAKTYNEPGSQVFKDANTI 278
Score = 66 (28.3 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
S F + + + PDY + P+D+ IR + Y+ +D +F+N+ YN+
Sbjct: 659 STVFLRLPSRSELPDYYAAIKRPIDMERIRSYMVQGRYQDVDSLAEDFILMFNNACTYNE 718
Query: 1610 NKRSKIY 1616
+ S IY
Sbjct: 719 PE-SLIY 724
Score = 65 (27.9 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYAR 45
L +R + +N Y + + D+ + NA ++N P+S I K A+
Sbjct: 409 LQQIREKMKNGDYEAVEQIEADLSVMFENARRYNMPNSTIYKRAQ 453
Score = 54 (24.1 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 13/61 (21%), Positives = 26/61 (42%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
D+ T+ + Y + D++ + NA +NE S + A ++ ++ KE
Sbjct: 543 DMRTIENNIRTERYNNEDALMEDMKLMFRNARHYNEEGSQVYNDANVLEKMVKDKQKELG 602
Query: 1475 P 1475
P
Sbjct: 603 P 603
Score = 47 (21.6 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLL----RII 1470
D+ +R+ Y+ + S D + NA +NEP S I + A ++ L RI
Sbjct: 683 DMERIRSYMVQGRYQDVDSLAEDFILMFNNACTYNEPESLIYRDALLLHRAFLEARRRIE 742
Query: 1471 KEPN 1474
+E N
Sbjct: 743 EEEN 746
Score = 39 (18.8 bits), Expect = 4.5e-06, Sum P(5) = 4.5e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLK 1807
E+ + Q++ PE D P KL+
Sbjct: 591 EKMVKDKQKELGPAPEEDDVGSPKLKLR 618
Score = 39 (18.8 bits), Expect = 4.5e-06, Sum P(5) = 4.5e-06
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 323 HEAA-KVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTA----SFLPKICQRL 376
H AA K+L + AKN L + D E A + + +++ ++ S+L I ++L
Sbjct: 133 HRAASKLLNVFLSAKNELLQGGDGEEAEDDEESEDAENTNASMEEERPPSYLKAILEQL 191
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 153 (58.9 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAA 535
L +V+CV +D E++V+G+ D + +W +L L G SG + + R LL +
Sbjct: 221 LDSVYCVQYDD--EIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVS 278
Query: 536 GTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
G+ D TI IW+ Q P+ V GH + GV V NY+ S+S D W+
Sbjct: 279 GSSDSTIIIWDWQNRRPLKVYFGHTDNVLGV------VVSENYIISSSRDHTARVWR 329
Score = 114 (45.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 43/181 (23%), Positives = 83/181 (45%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
Y GH +V C+ F + ++V+G+ D I +W ++ + L G + + + + +
Sbjct: 255 YKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVV-SE 313
Query: 530 NILLAAGTVDKTIRIWNLQTLAP----ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
N ++++ D T R+W L +P + VL GH + V + G + + S+D
Sbjct: 314 NYIISSSR-DHTARVWRLDATSPAEACMHVLRGHLASVNSVQYS--SKTGL--IVTASSD 368
Query: 586 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
+ W DI T H + + R G I C+ ++ G F+ +GS D +R++
Sbjct: 369 RTLRTW----DI----TTGHCIRIIHAHQR-G---IACAQYN--GKFIVSGSSDLTIRIF 414
Query: 646 K 646
+
Sbjct: 415 E 415
Score = 88 (36.0 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
I+I++A +G L+++L+GH + ++ + F+ ++S G+DG + IW+ + +Q
Sbjct: 411 IRIFEASSGKLLRMLQGHED---LIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCV--L 465
Query: 806 HNIVEGQGEGALFD 819
HN + G FD
Sbjct: 466 HNSRNSRVFGLQFD 479
Score = 87 (35.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 463 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR----ARDGKLLATLRGCS 518
+ N R V GH V V+ + I++ + D ++WR + + LRG
Sbjct: 290 WQNRRPLKVYFGHTDNVLGVVVSE--NYIISSSRDHTARVWRLDATSPAEACMHVLRGHL 347
Query: 519 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNY 578
++ + ++ L+ + D+T+R W++ T I ++ HQ G+ C + NG +
Sbjct: 348 ASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQ---RGIA-CA-QYNG-KF 401
Query: 579 LASTSTD 585
+ S S+D
Sbjct: 402 IVSGSSD 408
Score = 83 (34.3 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 614 IRPGNAH---ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQ 670
IR +AH I C+ ++ G F+ +GS D +R+++ L +L+ H D + +++
Sbjct: 382 IRIIHAHQRGIACAQYN--GKFIVSGSSDLTIRIFEASS-GKLLRMLQ--GHEDLIRTVR 436
Query: 671 WSHSHLRFVSGSRDGTALIWYYKCSQ 696
++ + VSG DGT IW + +
Sbjct: 437 FNDE--KIVSGGYDGTVRIWNFNTGE 460
Score = 71 (30.1 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 632 FLATGSGDHHVRVYKMDGVDSPLGILEV-EEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
++ + S DH RV+++D + V H V+S+Q+S V+ S D T W
Sbjct: 315 YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTW 374
Score = 62 (26.9 bits), Expect = 8.5e-11, Sum P(3) = 8.5e-11
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 732 SDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNE-VFVLESHPFDSRVLLSAGHDGLII 790
+D +++ ++ ++IW+ G+ VL N VF L+ FD R +++ H I+
Sbjct: 438 NDEKIVSG-GYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQ---FDHRRIIACTHSSEIL 493
Query: 791 IWD 793
+W+
Sbjct: 494 VWN 496
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 149 (57.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 149 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 207
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 263
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 264 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 317
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ + ++ H+ ++ + + +S S D
Sbjct: 318 RI-LYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 143 (55.4 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 592 -KYKLDIDISKTVFHE-PVMFNE 612
+ K I + + V FN+
Sbjct: 181 IRKKAAIQTFQNTYQVLAVTFND 203
Score = 115 (45.5 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 188 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 242
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 301
Query: 831 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 861
+ D+ ++Y L G N E+ FH D
Sbjct: 302 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 338
Score = 68 (29.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 118
Query: 573 VNGFNYLASTSTDGCIGFW 591
+G + L S STD + W
Sbjct: 119 TDG-SMLFSASTDKTVAVW 136
Score = 60 (26.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 57 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 100
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 318
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ + ++ H+ ++ + + +S S D
Sbjct: 319 RI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 143 (55.4 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 592 -KYKLDIDISKTVFHE-PVMFNE 612
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 115 (45.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 831 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 861
+ D+ ++Y L G N E+ FH D
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 339
Score = 73 (30.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 34/176 (19%), Positives = 74/176 (42%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 681 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
+ D T +W + + R +++ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 573 VNGFNYLASTSTDGCIGFW 591
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 318
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ + ++ H+ ++ + + +S S D
Sbjct: 319 RI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 143 (55.4 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 592 -KYKLDIDISKTVFHE-PVMFNE 612
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 115 (45.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 831 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 861
+ D+ ++Y L G N E+ FH D
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 339
Score = 73 (30.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 34/176 (19%), Positives = 74/176 (42%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 681 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
+ D T +W + + R +++ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 573 VNGFNYLASTSTDGCIGFW 591
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 49/212 (23%), Positives = 96/212 (45%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 176 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQVLAVTFNDTSDQ 234
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRIWD 290
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 291 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVW--DTTSR 344
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ + ++ H+ V+ + + +S S D
Sbjct: 345 RI-LYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 143 (55.4 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLW 206
Score = 116 (45.9 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 48/160 (30%), Positives = 69/160 (43%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 215 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 269
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + IWD+ + K+R K F V E L WSPDG+ A
Sbjct: 270 LSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 328
Query: 831 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 861
+ D+ ++Y L G N EL FH +
Sbjct: 329 GGSADRFVYVWDTTSRRILYKLPGHAGSVN---ELAFHPE 365
Score = 70 (29.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 34/176 (19%), Positives = 70/176 (39%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 223 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 279
Query: 681 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
+ D T IW + + R +++ H E + + +W +
Sbjct: 280 NAMDNTVRIWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSWSPDGSKIAG 329
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
F + +WD + ++ L GH V L HP + ++LSA D + + +I
Sbjct: 330 GSADRF-VYVWDTTSRRILYKLPGHAGSVNELAFHP-EEPIILSASSDKRLYMGEI 383
Score = 57 (25.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 19/48 (39%), Positives = 22/48 (45%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P G N LAS D I W D D
Sbjct: 84 APIMLLSGHEGEVYCCKFHPW---G-NTLASAGFDRLILLWNVYGDCD 127
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 209 (78.6 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 103/386 (26%), Positives = 169/386 (43%)
Query: 474 GHLSAVFCVLFD-KLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH + F +VTG+ D +LW +AT++G + +S +A +
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASI 191
Query: 533 LAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEV---NGFNYLASTSTDGCI 588
+A G++D TIR W+ + +PI L H I + + PL + +G LAS S D +
Sbjct: 192 IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTV 251
Query: 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
W KL +T+ +F + A I C + G ++ + S D +R++ D
Sbjct: 252 RIWNVKL-----RTL-----LFT--LSGHTAPITCVRWG-GQNWIYSSSYDKTIRIW--D 296
Query: 649 GVDSP-LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT-------------ALIWYYKC 694
D L IL+ H+ +V+ + S H+ SG+ D T A Y C
Sbjct: 297 AKDGKCLHILK--GHAARVNHLSLSTEHV-LRSGAYDHTDFKPKSFSDERRKAKERYEAC 353
Query: 695 SQWRFIRL-----DMNTCL--PH--TKE-TSDETNKKIKVTMVAWDASDRWVITAINFNF 744
+ RL D+ L P TK T ++K+ V ++ R + TA +F+
Sbjct: 354 LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKV-VNHASFSPDGRCIATA-SFDS 411
Query: 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW 804
+++WD G + L+GH V+ + DSR+L+S+ D + +WD+ S K +
Sbjct: 412 SVRLWDGKTGKFLATLRGHVAAVYQC-AWSTDSRLLVSSSQDTTLKVWDVRSKKMK---- 466
Query: 805 FHNIVEGQGEGALFDGKWSPDGTTCA 830
F + G E +F WSPDG A
Sbjct: 467 FD--LPGH-EDQVFAVDWSPDGQRVA 489
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 67/269 (24%), Positives = 108/269 (40%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR--- 677
+ C +++P +ATGS D+ +R + SP+G + H+ + ++ W HL
Sbjct: 180 VSCVAWAPDASIIATGSMDNTIRFWDPKK-GSPIGDA-LRRHTKPIMALCWQPLHLAPDS 237
Query: 678 ----FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733
SGS+D T IW K +R + T HT +T V W +
Sbjct: 238 GPYLLASGSKDNTVRIWNVK------LRTLLFTLSGHTAP----------ITCVRWGGQN 281
Query: 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
W+ ++ +++ I+IWDA +G + +LKGH V L VL S +D
Sbjct: 282 -WIYSS-SYDKTIRIWDAKDGKCLHILKGHAARVNHLSLST--EHVLRSGAYDHTDFKPK 337
Query: 794 ILSSKQRGYKW-FHNIVEGQGE---GALFDGK---WSPDGTTCALTDSYGHLLVYGLGGF 846
S ++R K + ++ GE A D + W P +T +T +GH V F
Sbjct: 338 SFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASF 397
Query: 847 KRPQNIPRELFFHTDYRTLNRPNGLFEPT 875
F + R + G F T
Sbjct: 398 SPDGRCIATASFDSSVRLWDGKTGKFLAT 426
Score = 134 (52.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V F G I T + D ++LW + GK LATLRG + A + LL
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLL 446
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D T+++W++++ L GH+ + V++ P +G +AS D + W +
Sbjct: 447 VSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSP---DG-QRVASGGADKAVRIWSH 502
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 51/212 (24%), Positives = 96/212 (45%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+SP G +A GS D + + V S
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRS 320
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
LG + S + DS++ + +S S D
Sbjct: 321 -LGQIPRHRLSRQEDSVK-PQEGIXILSASSD 350
Score = 142 (55.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 592 -KYKLDIDISKTVFHE-PVMFNE 612
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 127 (49.8 bits), Expect = 0.00022, P = 0.00022
Identities = 35/161 (21%), Positives = 75/161 (46%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V V F+ + I++G D IK+W R KL T+RG + ++ +++ + L + +
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 539 DKTIRIWNLQTLAP----ISVLVGH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
D T+R+W+++ AP + + G+ + C +G + +A+ S D + W +
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG-SKIAAGSADSFLYPW-H 314
Query: 594 KLDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL 633
L + + + H + ++P + S+ S L++
Sbjct: 315 SLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRLYM 355
Score = 115 (45.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 40/127 (31%), Positives = 58/127 (45%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 831 L--TDSY 835
DS+
Sbjct: 303 AGSADSF 309
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G GE+ LA+ D+ I +W++ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 573 VNGFNYLASTSTDGCIGFW 591
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWSVYGDCD 101
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 48/212 (22%), Positives = 95/212 (44%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQVLAVTFNDTSDQ 208
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+SP G +A GS D V V+ S
Sbjct: 265 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD---TTS 317
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ ++ H+ ++ + + +S S D
Sbjct: 318 RRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 142 (55.0 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLW 180
Score = 114 (45.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 38/120 (31%), Positives = 55/120 (45%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Score = 72 (30.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 34/176 (19%), Positives = 74/176 (42%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 681 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
+ D T +W + + R +++ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 573 VNGFNYLASTSTDGCIGFW 591
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 144 (55.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 149 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 207
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 263
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
+ + V +F + ++L S+SP G +A GS D V V+
Sbjct: 264 VRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 312
Score = 143 (55.4 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 592 -KYKLDIDISKTVFHE-PVMFNE 612
+ K I + + V FN+
Sbjct: 181 IRKKAAIQTFQNTYQVLAVTFND 203
Score = 124 (48.7 bits), Expect = 0.00058, P = 0.00058
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V V F+ + I++G D IK+W R KL T+RG + ++ +++ + L + +
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 255
Query: 539 DKTIRIWNLQTLAP----ISVLVGH-QGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK- 592
D T+R+W+++ AP + + G+ + C +G + +A+ S D + W
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG-SKIAAGSADRFVYVWDT 314
Query: 593 ------YKLDI---DISKTVFH--EPVM 609
YKL I++ FH EP++
Sbjct: 315 TSRRILYKLPGHAGSINEVAFHPDEPII 342
Score = 115 (45.5 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 188 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 242
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + +WD+ + K+R K F V E L WSPDG+ A
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-EKNLLRCSWSPDGSKIA 301
Query: 831 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 861
+ D+ ++Y L G N E+ FH D
Sbjct: 302 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 338
Score = 68 (29.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 118
Query: 573 VNGFNYLASTSTDGCIGFW 591
+G + L S STD + W
Sbjct: 119 TDG-SMLFSASTDKTVAVW 136
Score = 60 (26.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 57 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 100
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 474 GHLSAV-FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C + +++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 150 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQVLAVTFNDTSDQ 208
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ + GH +TG++ L G +YL S + D + W
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS---LSSEG-SYLLSNAMDNTVRVWD 264
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+SP G +A GS D V V+ D
Sbjct: 265 VRPFAPKERCVR----IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR 318
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ + ++ H+ ++ + + +S S D
Sbjct: 319 RI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 143 (55.4 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI LW D ATL+G SG + ++ + +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 591
L + + DKT+ +W+ +T + L GH VN C G + + S DG + W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 592 -KYKLDIDISKTVFHE-PVMFNE 612
+ K I + + V FN+
Sbjct: 182 IRKKAAIQTFQNTYQVLAVTFND 204
Score = 112 (44.5 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 46/160 (28%), Positives = 69/160 (43%)
Query: 713 ETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES 772
+T T + + VT D SD+ + I+ N IK+WD L ++GH + V L S
Sbjct: 189 QTFQNTYQVLAVTFN--DTSDQIISGGID-N-DIKVWDLRQNKLTYTMRGHADSVTGL-S 243
Query: 773 HPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ LLS D + +WD+ + K+R + F V E L WSPDG+ A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF-EKNLLRCSWSPDGSKIA 302
Query: 831 ---------LTDSYGHLLVYGLGGFKRPQNIPRELFFHTD 861
+ D+ ++Y L G N E+ FH D
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSIN---EVAFHPD 339
Score = 76 (31.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 35/176 (19%), Positives = 74/176 (42%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+L +F+ + +G D+ ++V+ + + L + H+D V + S +S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-TYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 681 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
+ D T +W + + R +R+ H E + + +W + D I
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVRIFQGNV--HNFEKN--------LLRCSW-SPDGSKIA 302
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
A + + + +WD + ++ L GH + + HP D ++LSA D + + +I
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP-DEPIILSASSDKRLYMGEI 357
Score = 68 (29.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
L G GE+ LA+ D+ I +WN+ + L GH G + +++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY---N 119
Query: 573 VNGFNYLASTSTDGCIGFW 591
+G + L S STD + W
Sbjct: 120 TDG-SMLFSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
API +L GH+G + F P NG + LAS D I W D D
Sbjct: 58 APIMLLSGHEGEVYCCKFHP---NG-STLASAGFDRLILLWNVYGDCD 101
>MGI|MGI:1891374 [details] [associations]
symbol:Brdt "bromodomain, testis-specific" species:10090
"Mus musculus" [GO:0001207 "histone displacement" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042393 "histone binding" evidence=ISO;IDA] [GO:0043484
"regulation of RNA splicing" evidence=IMP] [GO:0051039 "positive
regulation of transcription during meiosis" evidence=IMP]
[GO:0070577 "histone acetyl-lysine binding" evidence=IMP]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 MGI:MGI:1891374 GO:GO:0005634 GO:GO:0030154
GO:GO:0008380 EMBL:CH466529 GO:GO:0006397 GO:GO:0007283
GO:GO:0006351 GO:GO:0006338 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 CTD:676 KO:K11724 OMA:GVMKSSD OrthoDB:EOG4NVZJT
ChiTaRS:BRDT GO:GO:0001207 EMBL:AF358660 EMBL:AB208640
EMBL:AC126598 IPI:IPI00129480 IPI:IPI00760098 RefSeq:NP_001073342.1
RefSeq:NP_473395.2 UniGene:Mm.182836 PDB:2WP1 PDB:2WP2 PDBsum:2WP1
PDBsum:2WP2 ProteinModelPortal:Q91Y44 SMR:Q91Y44 DIP:DIP-48975N
IntAct:Q91Y44 PhosphoSite:Q91Y44 PRIDE:Q91Y44
Ensembl:ENSMUST00000031215 Ensembl:ENSMUST00000112677 GeneID:114642
KEGG:mmu:114642 UCSC:uc008ymb.1 UCSC:uc008ymc.1 InParanoid:Q91Y44
EvolutionaryTrace:Q91Y44 NextBio:368594 Bgee:Q91Y44 CleanEx:MM_BRDT
Genevestigator:Q91Y44 GermOnline:ENSMUSG00000029279 Uniprot:Q91Y44
Length = 956
Score = 152 (58.6 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 49/144 (34%), Positives = 67/144 (46%)
Query: 95 RPTAVTRAQR-EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDY 150
R TA+ E +N KK R N R VL+ LW S PF++PVD KL PDY
Sbjct: 6 RQTAIVNPPPPEYINTKKSGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDY 65
Query: 151 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 210
I+ PMDL TI++ L YE + ++D +F N YN+ I +M L +
Sbjct: 66 YTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTG-DDIVVMAQALEKL 124
Query: 211 AEEHLRRLTVRWNSHKNKEN-KKD 233
+ L ++ KE KKD
Sbjct: 125 FMQKLSQMPQEEQVVGGKERIKKD 148
Score = 152 (58.6 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 49/144 (34%), Positives = 67/144 (46%)
Query: 1510 RPTAVTRAQR-EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDY 1565
R TA+ E +N KK R N R VL+ LW S PF++PVD KL PDY
Sbjct: 6 RQTAIVNPPPPEYINTKKSGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDY 65
Query: 1566 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 1625
I+ PMDL TI++ L YE + ++D +F N YN+ I +M L +
Sbjct: 66 YTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTG-DDIVVMAQALEKL 124
Query: 1626 AEEHLRRLTVRWNSHKNKEN-KKD 1648
+ L ++ KE KKD
Sbjct: 125 FMQKLSQMPQEEQVVGGKERIKKD 148
Score = 118 (46.6 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 1537 CREVLETLWV---CPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPI 1591
C E+L+ + P + PF PVD L +Y +V PMDLGTI+ ++ Y+
Sbjct: 275 CSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAY 334
Query: 1592 DFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
+F DV+ +F N YN ++ M L + E H ++
Sbjct: 335 EFAADVRLMFMNCYKYNPPDH-EVVAMARTLQDVFELHFAKI 375
Score = 118 (46.6 bits), Expect = 0.00059, Sum P(4) = 0.00059
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 122 CREVLETLWV---CPDSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPI 176
C E+L+ + P + PF PVD L +Y +V PMDLGTI+ ++ Y+
Sbjct: 275 CSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAY 334
Query: 177 DFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
+F DV+ +F N YN ++ M L + E H ++
Sbjct: 335 EFAADVRLMFMNCYKYNPPDH-EVVAMARTLQDVFELHFAKI 375
Score = 96 (38.9 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 37/161 (22%), Positives = 59/161 (36%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C +I+ + L A PF PVD DL T++ + N+ Y+
Sbjct: 275 CSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAY 334
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVPVVYH------E 1484
DVR + N K+N P +V AR + D+ L K P+ P++ H +
Sbjct: 335 EFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDEPIESMHACHLTTNSAQ 394
Query: 1485 LLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQK 1525
L RV+ A + Q A++Q+
Sbjct: 395 ALSRESSSEASSGDASSEDSEDERVQHLAKLQEQLNAVHQQ 435
Score = 73 (30.8 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 1393 PFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNE 1450
PF PVD + DL T++ R +N++Y + + D + +N +N+
Sbjct: 50 PFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNK 109
Query: 1451 PHSNIVKYARIITDLLLRIIKEPNPVDVPVV 1481
+IV A+ + L ++ + + P + VV
Sbjct: 110 TGDDIVVMAQALEKLFMQKLSQM-PQEEQVV 139
Score = 65 (27.9 bits), Expect = 0.00059, Sum P(4) = 0.00059
Identities = 15/66 (22%), Positives = 34/66 (51%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R +N++Y + + D + +N +N+ +IV A+ + L ++ + + P
Sbjct: 75 LNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM-P 133
Query: 61 VDVPVV 66
+ VV
Sbjct: 134 QEEQVV 139
Score = 47 (21.6 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLSL 1839
+ DEN + +Q +K K+ PK++ + DNA M+ ++ LSL
Sbjct: 464 NNRDENPRKKPKQMKQK-EKAKINQPKKKKPLLKSEEEDNAKPMNYDEKRQLSL 516
Score = 46 (21.3 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 15/89 (16%), Positives = 28/89 (31%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKLK 1807
P P P + + +S S+S S S ++ +
Sbjct: 634 PPPPPPELASGSRLTDSSSSSGSGSGSSSSSSGSSSSSSSSGSASSSSDSSSSDSSDSEP 693
Query: 1808 VLYPKRRGQQSED-GSGDNASEMSELKQD 1835
++PK G + D +N ++ QD
Sbjct: 694 EIFPKFTGVKQNDLPPKENIKQIQSSVQD 722
Score = 45 (20.9 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1126 PKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKPSDW 1160
PK++++ K K Q K L+ E D KP ++
Sbjct: 474 PKQMKQKEKAKINQPKKKKPLLKSEEEDNAKPMNY 508
Score = 40 (19.1 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 1814 RGQQSEDGSGDNASEMSE 1831
R SE SGD +SE SE
Sbjct: 398 RESSSEASSGDASSEDSE 415
Score = 40 (19.1 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 1508 RVRPTAVTRAQREAMNQKKLKRP 1530
R +P + + ++ +NQ K K+P
Sbjct: 471 RKKPKQMKQKEKAKINQPKKKKP 493
Score = 39 (18.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 1055 QARTRAEYSEHIQDQYEDP 1073
+ART+ + +H++ +DP
Sbjct: 848 KARTQEQMRKHLEHNAKDP 866
Score = 37 (18.1 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 12/49 (24%), Positives = 16/49 (32%)
Query: 1759 EPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKLK 1807
EP+ S E S+ S D +S D Q KL+
Sbjct: 378 EPIESMHACHLTTNSAQALSRESSSEASSGDASSEDSEDERVQHLAKLQ 426
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 145 (56.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 40/129 (31%), Positives = 63/129 (48%)
Query: 468 QHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
+H L GH +A+ CV F G ++ + + D + LW A + L+ G S ISD+A
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 527 DNRNILLAAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
+ + + + D T+RIW+ ++ + VL GH + VNF P N + S S D
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS----NLIVSGSFD 149
Query: 586 GCIGFWKYK 594
I W+ K
Sbjct: 150 ETIRIWEVK 158
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFCV F+ +IV+G+ D I++W + GK + ++ S IS + + L+
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLI 185
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+ + D + +IW+ + + L+ + V+F NG L +T D + Y
Sbjct: 186 VSASHDGSCKIWDAKEGTCLKTLIDDKS--PAVSFAKFSPNGKFILVAT-LDSTLKLSNY 242
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVDS 652
+ H +F + S+FS G ++ +GS D+ V ++ + +
Sbjct: 243 ATGKFLKVYTGHTNKVF----------CITSAFSVTNGKYIVSGSEDNCVYLWDLQARN- 291
Query: 653 PLGILE-VEEHSDKVDSIQWSHSHLRFVSGSR---DGTALIW 690
IL+ +E H+D V S+ H +S S D T IW
Sbjct: 292 ---ILQRLEGHTDAVISVS-CHPVQNEISSSGNHLDKTIRIW 329
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 70/299 (23%), Positives = 120/299 (40%)
Query: 511 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
L TL G + IS + N LLA+ +VDKT+ +W+ + I GH I+ + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS- 94
Query: 571 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPG 629
+ +Y S S D + W + + K + H +F P + I+ SF
Sbjct: 95 ---SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 630 GLF--LATGSGDHHVRVYKM--DGVD-SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ TG ++ + M V + G L V D I + + D
Sbjct: 152 IRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDD 211
Query: 685 GTALIWYYKCS-QWRFI---RLDMNTCLPH------TKETSDETNKKIKVTMVAWDASDR 734
+ + + K S +FI LD L + K + TNK +T + +
Sbjct: 212 KSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGK 271
Query: 735 WVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH-DGLIIIW 792
++++ N + +WD +++Q L+GHT+ V + HP + + S H D I IW
Sbjct: 272 YIVSGSEDNC-VYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 108 (43.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 33/138 (23%), Positives = 63/138 (45%)
Query: 659 VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDET 718
++ HS + S+ ++ VS S DG+ IW K TCL K D+
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK----------EGTCL---KTLIDD- 211
Query: 719 NKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLES--HPFD 776
K V+ + + ++++ A + +K+ + G ++V GHTN+VF + S +
Sbjct: 212 -KSPAVSFAKFSPNGKFILVA-TLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTN 269
Query: 777 SRVLLSAGHDGLIIIWDI 794
+ ++S D + +WD+
Sbjct: 270 GKYIVSGSEDNCVYLWDL 287
Score = 99 (39.9 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ I+IW+ G V+++K H+ + + + D +++SA HDG IWD
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR-DGSLIVSASHDGSCKIWD-- 198
Query: 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT--TCALTDSYGHLLVYGLGGF 846
+K+ G +++ + F K+SP+G A DS L Y G F
Sbjct: 199 -AKE-G-TCLKTLIDDKSPAVSF-AKFSPNGKFILVATLDSTLKLSNYATGKF 247
>UNIPROTKB|Q86U86 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0000228 "nuclear chromosome" evidence=NAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0008285 GO:GO:0007507 GO:GO:0000776 GO:GO:0007067
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
MIM:144700 CTD:55193 HOVERGEN:HBG079860 KO:K11757 EMBL:AF197569
EMBL:AF225870 EMBL:AF225871 EMBL:AF225872 EMBL:AF177387
EMBL:AY281068 EMBL:BC115009 EMBL:BC115010 EMBL:BC115011
EMBL:BC129934 EMBL:BC129935 EMBL:AK056541 IPI:IPI00023097
IPI:IPI00301041 IPI:IPI00334894 IPI:IPI00384176 IPI:IPI00398781
IPI:IPI00640304 IPI:IPI00873041 IPI:IPI00909142 IPI:IPI00910435
RefSeq:NP_060783.3 UniGene:Hs.189920 UniGene:Hs.476320 PDB:2KTB
PDB:3G0J PDB:3HMF PDB:3IU5 PDB:3IU6 PDB:3K2J PDB:3LJW PDB:3MB4
PDB:3TLP PDBsum:2KTB PDBsum:3G0J PDBsum:3HMF PDBsum:3IU5
PDBsum:3IU6 PDBsum:3K2J PDBsum:3LJW PDBsum:3MB4 PDBsum:3TLP
ProteinModelPortal:Q86U86 SMR:Q86U86 DIP:DIP-33045N IntAct:Q86U86
MINT:MINT-1195749 STRING:Q86U86 PhosphoSite:Q86U86 DMDM:73921624
PaxDb:Q86U86 PRIDE:Q86U86 Ensembl:ENST00000296302
Ensembl:ENST00000337303 Ensembl:ENST00000356770
Ensembl:ENST00000394830 Ensembl:ENST00000409057
Ensembl:ENST00000409114 Ensembl:ENST00000409767
Ensembl:ENST00000410007 Ensembl:ENST00000412587 GeneID:55193
KEGG:hsa:55193 UCSC:uc003deq.2 UCSC:uc003der.2 UCSC:uc003des.2
UCSC:uc003det.2 UCSC:uc003deu.2 UCSC:uc003dew.2 UCSC:uc003dey.2
UCSC:uc010hmk.1 GeneCards:GC03M052579 H-InvDB:HIX0003364
HGNC:HGNC:30064 HPA:HPA015629 MIM:606083 neXtProt:NX_Q86U86
PharmGKB:PA162398846 InParanoid:Q86U86 OMA:WLKVGDC PhylomeDB:Q86U86
ChEMBL:CHEMBL1795184 ChiTaRS:PBRM1 EvolutionaryTrace:Q86U86
GenomeRNAi:55193 NextBio:59051 ArrayExpress:Q86U86 Bgee:Q86U86
Genevestigator:Q86U86 GermOnline:ENSG00000163939 Uniprot:Q86U86
Length = 1689
Score = 147 (56.8 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
I +R D Y ++D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVYNDAHILEKLLKEKRKEL 625
Score = 147 (56.8 bits), Expect = 5.7e-11, Sum P(4) = 5.7e-11
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
I +R D Y ++D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVYNDAHILEKLLKEKRKEL 625
Score = 106 (42.4 bits), Expect = 1.7e-11, Sum P(5) = 1.7e-11
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 100 (40.3 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 100 (40.3 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 1608
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 1609 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 88 (36.0 bits), Expect = 2.9e-11, Sum P(4) = 2.9e-11
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 229 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 84 (34.6 bits), Expect = 5.7e-11, Sum P(4) = 5.7e-11
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 642 SRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK 701
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
PMD+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 702 KPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 760
Query: 1631 RRLTVRWNSH 1640
R L +SH
Sbjct: 761 RDLEGDEDSH 770
Score = 82 (33.9 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 230 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 81 (33.6 bits), Expect = 2.9e-11, Sum P(4) = 2.9e-11
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N+++Y
Sbjct: 70 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 126
Score = 67 (28.6 bits), Expect = 1.7e-11, Sum P(5) = 1.7e-11
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 401 GQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 460
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 461 RYNVPNSAI--YKRVL 474
Score = 65 (27.9 bits), Expect = 2.7e-09, Sum P(4) = 2.7e-09
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +R + +N+ Y + + D+ + NA+++N P+S I Y R++
Sbjct: 430 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRVL 474
Score = 61 (26.5 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 705 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 764
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 765 GDEDSHVPNVTLLIQELIHN 784
Score = 56 (24.8 bits), Expect = 9.9e-07, Sum P(6) = 9.9e-07
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 567 DLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELG 626
Query: 1475 PV 1476
P+
Sbjct: 627 PL 628
Score = 44 (20.5 bits), Expect = 1.7e-11, Sum P(5) = 1.7e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 94 LMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 44 (20.5 bits), Expect = 6.8e-07, Sum P(5) = 6.8e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 794 DDEGRCYSDSLAEIPAVDPN 813
Score = 43 (20.2 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1805 KLKVLYPKRRGQQSEDGSG 1823
KLK KR ++SED SG
Sbjct: 918 KLKREEEKREAEKSEDSSG 936
Score = 43 (20.2 bits), Expect = 6.8e-07, Sum P(5) = 6.8e-07
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q + + A + N S I + A + ++I E
Sbjct: 825 IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 878
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEV 904
PPH +PP + L G P PP V
Sbjct: 1519 PPHHLPPG-VPGLPGIP-PPGV 1538
Score = 40 (19.1 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555
S +S D + + G K R+ NL T+ PI+V
Sbjct: 12 SSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAV 49
Score = 40 (19.1 bits), Expect = 8.7e-06, Sum P(5) = 8.7e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 598 RHYNEEGSQVYNDAHI 613
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(5) = 2.0e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1239 LAVMKPNG--KLTNEFFNIKYHDMPDVIDFFVL 1269
L + KP K+ + KY D+ +++ FV+
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVM 730
Score = 39 (18.8 bits), Expect = 4.8e-06, Sum P(5) = 4.8e-06
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 912 ENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYND 955
+N++D+ + + VE S NGE Q HYND
Sbjct: 1114 DNSEDSRAEDNFNLEKEKEDVPVEMS--NGEPGCHYFEQLHYND 1155
Score = 38 (18.4 bits), Expect = 4.8e-06, Sum P(5) = 4.8e-06
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1408 ELSRLVGTEWRNL 1420
Score = 37 (18.1 bits), Expect = 9.9e-07, Sum P(6) = 9.9e-07
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 974 NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHKIVVE 1012
+G+S ++ TS +G+A KN K+ +V+E
Sbjct: 495 DGDSMISS-ATSDTGSAKRKSKKNIRKQRMKILFNVVLE 532
Score = 37 (18.1 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF--C-PLEV 573
K + + NL+ P++ ++G +++ +F C P E+
Sbjct: 1213 KEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEI 1249
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 210 (79.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 90/375 (24%), Positives = 158/375 (42%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV CV F G+ + +G+ D ++LW L T +G + +A L
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 534 AAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
+G+ I WN + S L GH+ ITG+++ P+ ++ ++S DG W
Sbjct: 167 VSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIW 226
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651
DI + K++ + + + C + G+ + TGS D +++++
Sbjct: 227 ----DITLKKSII---CLSGHTLA-----VTCVKWGGDGI-IYTGSQDCTIKMWET--TQ 271
Query: 652 SPLGILEVEEHSDKVDSIQWS-----------HSHLRFVSGSRDGTALIWYYKC---SQW 697
L I E++ H ++S+ S H+ ++ AL Y K S
Sbjct: 272 GKL-IRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPE 330
Query: 698 RFIR-LDMNTCLPHTKETSDETNKKIK-----VTMVAWDASDRWVITAINFNFQIKIWDA 751
R + D T S + K++ V V + +W+ +A +F+ +++W+
Sbjct: 331 RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASA-SFDKSVRLWNG 389
Query: 752 FNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEG 811
G V V +GH V+ + S DSR+LLS D + IW+I + K + + G
Sbjct: 390 ITGQFVTVFRGHVGPVYQV-SWSADSRLLLSGSKDSTLKIWEIRTKKLK------QDLPG 442
Query: 812 QGEGALFDGKWSPDG 826
+ +F WSPDG
Sbjct: 443 HAD-EVFAVDWSPDG 456
Score = 42 (19.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 306 DQELMLLIIKYLEKGPCHEAAKVLT 330
D+EL++ + YLEK KVLT
Sbjct: 61 DEELLVPVGTYLEKNKV-SVEKVLT 84
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 202 (76.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 88/343 (25%), Positives = 158/343 (46%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V + F G+++ +G+ D I LW + G+LL T G I +A L
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+ + D TI+IW+L T L H + V F P +G LAS+S D I W
Sbjct: 850 ASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP---DG-KLLASSSLDSTIKVWNP 905
Query: 594 ---KLDIDIS-KTVFHEPVMFN---ERIRPGNAHILCSSFSPG-GLFLATGSG-DHHVR- 643
+L + ++ + + V F+ +++ G+ ++P G L T G VR
Sbjct: 906 ATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRS 965
Query: 644 -VYKMDG--VDSPLGILEVEEHSDKVDSIQWSHS-H---LRFVSGSRDGTALIWYYKCSQ 696
+ DG + S ++ + +Q + H +R V+ S DG L+ S
Sbjct: 966 VAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLV---SGSD 1022
Query: 697 WRFIRL-DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD 755
I+L D+ T +++ ++ ++ + VA+ D+ + ++ + + IK+WD+ G+
Sbjct: 1023 DNTIKLWDLATS--ELQQSLEDHSRSVHA--VAFSPDDKQLASS-SLDSTIKLWDSATGE 1077
Query: 756 LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798
L + L+GH+ V + P D ++L S +DG I +W+ L+ +
Sbjct: 1078 LQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGE 1119
Score = 175 (66.7 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 54/171 (31%), Positives = 82/171 (47%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 534
HL V V+F G+ +V+G+ D +K+W G+LL TL G SG + +A LLA
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 535 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 594
+G+ D TI +W+ T + GH I V F P +G LAS S D I W
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP---DG-KELASASDDSTIKIWDLA 864
Query: 595 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
++ +T+ ++ +R +FSP G LA+ S D ++V+
Sbjct: 865 TG-ELQQTLDSH----SQSVRS-------VAFSPDGKLLASSSLDSTIKVW 903
Score = 142 (55.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 39/118 (33%), Positives = 56/118 (47%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
G V V F G+ + +G D IKLW + G+LL TL G S I + LL
Sbjct: 1126 GRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLL 1185
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
A+G+ D+T ++W+ T + + GH + V F P +G LAS+S I W
Sbjct: 1186 ASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP---DG-KLLASSSYGETIKLW 1239
Score = 140 (54.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 40/118 (33%), Positives = 54/118 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V V F G+++ + + D IKLW G+L TL G S + +A L
Sbjct: 1084 GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQL 1143
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
A+G D TI++W+ T + L GH I V F P +G LAS S D W
Sbjct: 1144 ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP---DG-KLLASGSYDQTAKLW 1197
Score = 126 (49.4 bits), Expect = 4.2e-06, Sum P(4) = 4.2e-06
Identities = 48/171 (28%), Positives = 76/171 (44%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 534
H +V V F + + + + D IKLW + G+L TL G S + + LLA
Sbjct: 1043 HSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA 1102
Query: 535 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 594
+ + D TI++WN T L G + V F P +G LAS D I W
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP---DG-KQLASGYYDSTIKLWDSA 1158
Query: 595 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
++ +T+ ++RI+ ++ FSP G LA+GS D +++
Sbjct: 1159 TG-ELLQTLEGH----SDRIQS----VV---FSPDGKLLASGSYDQTAKLW 1197
Score = 106 (42.4 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 709 PHTKETSDE-TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 767
P T E T + V VA+ + + + ++ IK+WD+ G+L+Q L+GH++ +
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGY-YDSTIKLWDSATGELLQTLEGHSDRI 1173
Query: 768 FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT 827
+ P D ++L S +D +WD + + I EG + + +SPDG
Sbjct: 1174 QSVVFSP-DGKLLASGSYDQTAKLWDPATGE------LLQIFEGHSKW-VESVAFSPDGK 1225
Query: 828 TCALTDSYGHLL 839
A + SYG +
Sbjct: 1226 LLA-SSSYGETI 1236
Score = 91 (37.1 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 26/103 (25%), Positives = 52/103 (50%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
D ++ + +++ K+WD G+L+Q+ +GH+ V + P D ++L S+ + I +W
Sbjct: 1181 DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP-DGKLLASSSYGETIKLW 1239
Query: 793 DILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 835
D ++ + + ++ E G A +SPDG A D +
Sbjct: 1240 DPVTGEL--LQTLNDPDESAGSVA-----FSPDGNRLASVDIF 1275
Score = 80 (33.2 bits), Expect = 8.8e-10, Sum P(3) = 8.8e-10
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
D ++ + +++ IK+W+ G+L Q L G ++ V + P D + L S +D I +W
Sbjct: 1097 DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP-DGKQLASGYYDSTIKLW 1155
Query: 793 DILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSY 835
D + + +EG + + +SPDG A + SY
Sbjct: 1156 DSATGE------LLQTLEGHSD-RIQSVVFSPDGKLLA-SGSY 1190
Score = 72 (30.4 bits), Expect = 4.6e-11, Sum P(4) = 4.6e-11
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 744 FQIKIWDAFNGDLVQVLKGHTNEVF 768
F KIWD G+L+Q LKGH+ V+
Sbjct: 1275 FDTKIWDPATGELLQALKGHSKWVW 1299
Score = 68 (29.0 bits), Expect = 4.6e-11, Sum P(4) = 4.6e-11
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEV-EEHSDKVDSIQWSHSHLRFVSGSR 683
FSP G LA+GS D +++ D G +L++ E HS V+S+ +S S S
Sbjct: 1178 FSPDGKLLASGSYDQTAKLW-----DPATGELLQIFEGHSKWVESVAFSPDGKLLASSSY 1232
Query: 684 DGTALIW 690
T +W
Sbjct: 1233 GETIKLW 1239
Score = 53 (23.7 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
V VA+ + D ++ + ++ IK+WD G+L+Q L
Sbjct: 1215 VESVAF-SPDGKLLASSSYGETIKLWDPVTGELLQTL 1250
Score = 37 (18.1 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 12 FYRRITSAQFDVRYL 26
+ +++T+AQ ++ YL
Sbjct: 27 YIKKVTNAQKEINYL 41
>UNIPROTKB|E1BNH8 [details] [associations]
symbol:E1BNH8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0008285 GO:GO:0007507
GO:GO:0000776 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:DAAA02054367 IPI:IPI00699896 Ensembl:ENSBTAT00000019672
Uniprot:E1BNH8
Length = 1664
Score = 145 (56.1 bits), Expect = 2.2e-12, Sum P(4) = 2.2e-12
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 511 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 567
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 1616
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 568 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVY 607
Score = 145 (56.1 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 511 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 567
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 201
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 568 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVY 607
Score = 106 (42.4 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 100 (40.3 bits), Expect = 2.2e-12, Sum P(4) = 2.2e-12
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 404 AEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 462
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 463 V-PNSAIYKRVLKLQQVMQAKKKELARR 489
Score = 100 (40.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 1608
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 404 AEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 462
Query: 1609 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY +L + + + L R
Sbjct: 463 V-PNSAIYKRVLKLQQVMQAKKKELARR 489
Score = 88 (36.0 bits), Expect = 8.6e-11, Sum P(4) = 8.6e-11
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 229 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 82 (33.9 bits), Expect = 2.2e-12, Sum P(4) = 2.2e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 230 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 78 (32.5 bits), Expect = 8.6e-11, Sum P(4) = 8.6e-11
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N++ Y
Sbjct: 70 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAY 126
Score = 69 (29.3 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 400 GQLIAEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 459
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 460 RYNVPNSAI--YKRVL 473
Score = 65 (27.9 bits), Expect = 7.2e-07, Sum P(4) = 7.2e-07
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +R + +N+ Y + + D+ + NA+++N P+S I Y R++
Sbjct: 429 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRVL 473
Score = 61 (26.5 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 680 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 739
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 740 GDEDSHVPNVTLLIQELIHN 759
Score = 59 (25.8 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1573 MDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRR 1632
+D+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E R
Sbjct: 679 LDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETRRD 737
Query: 1633 LTVRWNSH 1640
L +SH
Sbjct: 738 LEGDEDSH 745
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(6) = 0.00027
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 566 DLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELG 625
Query: 1475 PV 1476
P+
Sbjct: 626 PL 627
Score = 49 (22.3 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
DL ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 93 DLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 43 (20.2 bits), Expect = 2.2e-12, Sum P(4) = 2.2e-12
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1805 KLKVLYPKRRGQQSEDGSG 1823
KLK KR ++SED SG
Sbjct: 893 KLKREEEKREAEKSEDSSG 911
Score = 43 (20.2 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 94 LMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 43 (20.2 bits), Expect = 1.9e-06, Sum P(5) = 1.9e-06
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q + + A + N S I + A + ++I E
Sbjct: 800 IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 853
Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEV 904
PPH +PP + L G P PP V
Sbjct: 1494 PPHHLPPG-VPGLPGIP-PPGV 1513
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(5) = 1.9e-06
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 1164 VVPKKAPYYPQMGDEVMFFKQGYQKYVDAVRSKGIYELSRLRSSPWGN 1211
+ PKK+ Y M ++ + + Y D R + + ++ ++RS N
Sbjct: 646 ISPKKSKYMTPMQQKLNEVYEAVKNYTDK-RGRRL-DMEKIRSHMMAN 691
Score = 39 (18.8 bits), Expect = 3.0e-06, Sum P(5) = 3.0e-06
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + P+
Sbjct: 769 DDEGRCYSDSLAEIPAVDPS 788
Score = 38 (18.4 bits), Expect = 3.2e-05, Sum P(5) = 3.2e-05
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1383 ELSRLVGTEWRNL 1395
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF--C-PLEV 573
K + + NL+ P++ ++G +++ +F C P E+
Sbjct: 1188 KEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEI 1224
Score = 37 (18.1 bits), Expect = 0.00027, Sum P(6) = 0.00027
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 974 NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHKIVVE 1012
+G+S ++ TS +G+A KN K+ +V+E
Sbjct: 494 DGDSMISS-ATSDTGSAKRKSKKNIRKQRMKILFNVVLE 531
>UNIPROTKB|E2RRL7 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:AAEX03012193 EMBL:AAEX03012194 EMBL:AAEX03012195
Ensembl:ENSCAFT00000014524 Uniprot:E2RRL7
Length = 1689
Score = 145 (56.1 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 1616
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVY 608
Score = 145 (56.1 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 201
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVY 608
Score = 106 (42.4 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 99 (39.9 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 99 (39.9 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 1608
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 1609 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 88 (36.0 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 229 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 84 (34.6 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 642 SRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK 701
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
PMD+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 702 KPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 760
Query: 1631 RRLTVRWNSH 1640
R L +SH
Sbjct: 761 RDLEGDEDSH 770
Score = 82 (33.9 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 230 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 78 (32.5 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N++ Y
Sbjct: 70 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAY 126
Score = 68 (29.0 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 401 GQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 460
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 461 RYNVPNSAI--YKRVL 474
Score = 65 (27.9 bits), Expect = 3.5e-09, Sum P(4) = 3.5e-09
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +R + +N+ Y + + D+ + NA+++N P+S I Y R++
Sbjct: 430 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRVL 474
Score = 61 (26.5 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 705 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 764
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 765 GDEDSHVPNVTLLIQELIHN 784
Score = 54 (24.1 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 567 DLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELG 626
Query: 1475 PV 1476
P+
Sbjct: 627 PL 628
Score = 44 (20.5 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 1787 QEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSG 1823
+E + +P+ E KLK KR ++SED SG
Sbjct: 904 KEKKEKLPK----ELEEDKLKREEEKREAEKSEDSSG 936
Score = 44 (20.5 bits), Expect = 8.6e-07, Sum P(5) = 8.6e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 794 DDEGRCYSDSLAEIPAVDPN 813
Score = 43 (20.2 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 94 LMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 43 (20.2 bits), Expect = 8.6e-07, Sum P(5) = 8.6e-07
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q + + A + N S I + A + ++I E
Sbjct: 825 IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 878
Score = 43 (20.2 bits), Expect = 4.0e-06, Sum P(5) = 4.0e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEV 904
PPH +PP + L G P PP V
Sbjct: 1519 PPHHLPPG-VPGLPGIP-PPGV 1538
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555
S +S D + + G K R+ NL T+ PI+V
Sbjct: 12 SSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAV 49
Score = 40 (19.1 bits), Expect = 8.8e-06, Sum P(5) = 8.8e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 598 RHYNEEGSQVYNDAHI 613
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(5) = 2.6e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1239 LAVMKPNG--KLTNEFFNIKYHDMPDVIDFFVL 1269
L + KP K+ + KY D+ +++ FV+
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVM 730
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1408 ELSRLVGTEWRNL 1420
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 974 NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHKIVVE 1012
+G+S ++ TS +G+A KN K+ +V+E
Sbjct: 495 DGDSMISS-ATSDAGSAKRKSKKNIRKQRMKILFNVVLE 532
Score = 37 (18.1 bits), Expect = 4.0e-06, Sum P(5) = 4.0e-06
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF--C-PLEV 573
K + + NL+ P++ ++G +++ +F C P E+
Sbjct: 1213 KEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEI 1249
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 67/236 (28%), Positives = 108/236 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V F G ++ +G++D IKLW G L TL G S + +A LL
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLL 98
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG--FNYLASTSTDGCIGFW 591
A+G+ D TI++WN + + + GH + V F P NG +N + G
Sbjct: 99 ASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP---NGQLWNPAIGSLKHTIEGHS 155
Query: 592 KYKLDIDIS------------KTV--FHEPVMFNERIRPGNAH-ILCSSFSPGGLFLATG 636
+ L + S KT+ + + G+++ +L FSP G LA+G
Sbjct: 156 DWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASG 215
Query: 637 SGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
S D ++++ D P G L+ +E HS+K++S+ +S + SGS D T +W
Sbjct: 216 SNDATIKLW-----DPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLW 266
Score = 185 (70.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 85/306 (27%), Positives = 134/306 (43%)
Query: 508 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVN 567
G L TL G S I + LLA+G+ D TI++W+ + L GH + V
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 568 FCPLEVNGFNYLASTSTDGCIGFW-------KYKLD--IDISKTVFHEP--VMFNERIRP 616
F P NG LAS S+D I W K+ ++ D ++V P ++N I
Sbjct: 91 FSP---NG-QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 617 ------GNAH-ILCSSFSPGGLFLATGSGDHHVRVYKMD--GVDSPLGILEVEEHSDKVD 667
G++ +L +FSP G LA+GS + ++++ G+ LG HS+ V
Sbjct: 147 LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG-----GHSNWVL 201
Query: 668 SIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMV 727
+ +S SGS D T +W L HT E +NK + +
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGS-----------LKHTLE--GHSNK---IESL 245
Query: 728 AWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDG 787
A+ + + ++ + + + IK+WD G LKGH++ V + P DS++L S D
Sbjct: 246 AFSPNGQ-LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSP-DSQLLESGSGDN 303
Query: 788 LIIIWD 793
I +WD
Sbjct: 304 TIKLWD 309
Score = 161 (61.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 44/143 (30%), Positives = 68/143 (47%)
Query: 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 508
SG +++ + L+ H + GH + V ++F G ++ +G++D IKLW G
Sbjct: 172 SGSAEKTIKLWDSATCGLK-HTLG-GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSG 229
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L TL G S +I +A LLA+G+ D TI++W+ T + L GH ++ V F
Sbjct: 230 SLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVF 289
Query: 569 CPLEVNGFNYLASTSTDGCIGFW 591
P L S S D I W
Sbjct: 290 SP----DSQLLESGSGDNTIKLW 308
Score = 128 (50.1 bits), Expect = 0.00024, P = 0.00024
Identities = 78/303 (25%), Positives = 125/303 (41%)
Query: 519 GEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNY 578
G I+DI +D N L + K W + + L GH I V F P +G
Sbjct: 5 GIITDI-VDCINTLQSTLQRPKVEDNWGPE----LQTLEGHSDWIETVTFSP---DG-RL 55
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVM--FNERIRPGNAHILCSSFSPGGLFLATG 636
LAS S D I W +P + + ++ + +FSP G LA+G
Sbjct: 56 LASGSNDTTIKLW--------------DPASGGLKQTLEGHSSSVQSVAFSPNGQLLASG 101
Query: 637 SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHS---------HLRF-VSGSRDGT 686
S D ++++ DS +E HSD+V+S+ +S + L+ + G D
Sbjct: 102 SSDTTIKLWN-SASDSLKHTME--GHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWV 158
Query: 687 ALIWYYKCSQW-------RFIRL-DMNTC-LPHTKETSDETNKKIKVTMVAWDASDRWVI 737
+ + Q + I+L D TC L HT +N V + + R +
Sbjct: 159 LSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHT--LGGHSNW---VLPLVFSPDGRLLA 213
Query: 738 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 797
+ N + IK+WD +G L L+GH+N++ L P + ++L S D I +WD +
Sbjct: 214 SGSN-DATIKLWDPPSGSLKHTLEGHSNKIESLAFSP-NGQLLASGSSDATIKLWDTATG 271
Query: 798 KQR 800
R
Sbjct: 272 SFR 274
>RGD|1565549 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0001890 "placenta
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0007507 "heart development"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 RGD:1565549 GO:GO:0008285 GO:GO:0007507 GO:GO:0000776
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
OrthoDB:EOG41NTK5 GeneTree:ENSGT00390000003017 IPI:IPI00766567
Ensembl:ENSRNOT00000016581 UCSC:RGD:1565549 NextBio:655693
ArrayExpress:D3ZT52 Uniprot:D3ZT52
Length = 1704
Score = 176 (67.0 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 55/234 (23%), Positives = 105/234 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 401 GQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 460
Query: 1447 KFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVVYHELLQNYXXXXXXXXXXXXXXXRQ 1506
++N P+S I Y R+ L L+ + + ++ + +++ R+
Sbjct: 461 RYNVPNSAI--YKRV---LKLQQVMQAKKKEL--ARRDDIEDGDSMISSATSDTGSAKRK 513
Query: 1507 RRVRPTAVTRAQR----EAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDH 1562
R + + +R + + ++++K FN E RE +C + F K D+
Sbjct: 514 RNTHDSEMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDY 570
Query: 1563 PDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 1616
PDY KI++ PMDL I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 571 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNE-EGSQVY 623
Score = 173 (66.0 bits), Expect = 1.9e-09, Sum P(4) = 1.9e-09
Identities = 50/205 (24%), Positives = 98/205 (47%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L +R + +N+ Y + + D+ + NA+++N P+S I Y R+ L L+ + +
Sbjct: 430 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRV---LKLQQVMQAKK 484
Query: 61 VDVPVVYHELLQNYXXXXXXXXXXXXXXXRQRRVRPTAVTRAQR----EAMNQKKLKRPF 116
++ + +++ R+R + + +R + + ++++K F
Sbjct: 485 KEL--ARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKILF 542
Query: 117 NWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPI 176
N E RE +C + F K D+PDY KI++ PMDL I +R D Y
Sbjct: 543 NVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEE 599
Query: 177 DFVKDVKRVFHNSRNYNQNKRSKIY 201
++D+K +F N+R+YN+ + S++Y
Sbjct: 600 GMMEDMKLMFRNARHYNE-EGSQVY 623
Score = 106 (42.4 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 99 (39.9 bits), Expect = 2.8e-07, Sum P(5) = 2.8e-07
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 229 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 84 (34.6 bits), Expect = 1.9e-09, Sum P(4) = 1.9e-09
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 657 SRKSGVSPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK 716
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
PMD+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 717 KPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 775
Query: 1631 RRLTVRWNSH 1640
R L +SH
Sbjct: 776 RDLEGDEDSH 785
Score = 82 (33.9 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 230 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 77 (32.2 bits), Expect = 7.4e-10, Sum P(3) = 7.4e-10
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N++ Y
Sbjct: 70 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDINLLTADFQLLFNNAKAY 126
Score = 61 (26.5 bits), Expect = 3.4e-07, Sum P(4) = 3.4e-07
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 720 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 779
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 780 GDEDSHVPNVTLLIQELIHN 799
Score = 57 (25.1 bits), Expect = 2.8e-07, Sum P(5) = 2.8e-07
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 582 DLKIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELG 641
Query: 1475 PV 1476
P+
Sbjct: 642 PL 643
Score = 44 (20.5 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y I D + L NA+ + +P S K A + DL LR E
Sbjct: 94 LMKIQQKLKMEEYDDINLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 809 DDEGRCYSDSLAEIPAVDPN 828
Score = 43 (20.2 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1805 KLKVLYPKRRGQQSEDGSG 1823
KLK KR ++SED SG
Sbjct: 933 KLKREEEKREAEKSEDSSG 951
Score = 43 (20.2 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEV 904
PPH +PP + L G P PP V
Sbjct: 1534 PPHHLPPG-VPGLPGIP-PPGV 1553
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R ++ YRR+ Q + + A + N S I + A + +RI E
Sbjct: 840 IRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIRDE 893
Score = 40 (19.1 bits), Expect = 1.9e-09, Sum P(4) = 1.9e-09
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 613 RHYNEEGSQVYNDAHI 628
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF--C-PLEV 573
K + + NL+ P+S ++G +++ +F C P E+
Sbjct: 1228 KEVFLSNLEETCPMSCILGKCAVLSFKDFLSCRPTEI 1264
Score = 39 (18.8 bits), Expect = 8.4e-05, Sum P(5) = 8.4e-05
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1239 LAVMKPNG--KLTNEFFNIKYHDMPDVIDFFVL 1269
L + KP K+ + KY D+ +++ FV+
Sbjct: 713 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVM 745
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(4) = 4.5e-05
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1423 ELSRLVGTEWRNL 1435
>FB|FBgn0004656 [details] [associations]
symbol:fs(1)h "female sterile (1) homeotic" species:7227
"Drosophila melanogaster" [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0004672 "protein kinase activity"
evidence=NAS] [GO:0007362 "terminal region determination"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0016021
GO:GO:0045892 EMBL:AE014298 GO:GO:0007476 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
PROSITE:PS51525 GeneTree:ENSGT00700000104285 GO:GO:0007362
EMBL:M23221 EMBL:M23222 EMBL:BT015270 EMBL:M15762 EMBL:M15763
EMBL:M15764 PIR:A43742 RefSeq:NP_001162699.1 RefSeq:NP_511078.2
RefSeq:NP_727228.1 RefSeq:NP_996368.1 RefSeq:NP_996369.1
RefSeq:NP_996370.1 UniGene:Dm.7909 ProteinModelPortal:P13709
SMR:P13709 DIP:DIP-19376N IntAct:P13709 MINT:MINT-925900
STRING:P13709 PaxDb:P13709 EnsemblMetazoa:FBtr0071119 GeneID:31722
KEGG:dme:Dmel_CG2252 CTD:31722 FlyBase:FBgn0004656
HOGENOM:HOG000264002 InParanoid:P13709 OMA:RYEPPVE
OrthoDB:EOG40P2P2 PhylomeDB:P13709 ChiTaRS:fs(1)h GenomeRNAi:31722
NextBio:775009 Bgee:P13709 GermOnline:CG2252 Uniprot:P13709
Length = 2038
Score = 150 (57.9 bits), Expect = 3.2e-12, Sum P(4) = 3.2e-12
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 94 VRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVD--KLDHPDYD 151
V+P + A+R N +L+ + V++ +W S PF++PVD KL+ PDY
Sbjct: 21 VQPPVIPPAERPGRNTNQLQYLI------KTVMKVIWKHHFSWPFQQPVDAKKLNLPDYH 74
Query: 152 KIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFA 211
KI+ PMD+GTI++ L + Y S + ++D +F+N YN+ + + T F
Sbjct: 75 KIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFL 134
Query: 212 EE 213
++
Sbjct: 135 QK 136
Score = 150 (57.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 1509 VRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVD--KLDHPDYD 1566
V+P + A+R N +L+ + V++ +W S PF++PVD KL+ PDY
Sbjct: 21 VQPPVIPPAERPGRNTNQLQYLI------KTVMKVIWKHHFSWPFQQPVDAKKLNLPDYH 74
Query: 1567 KIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFA 1626
KI+ PMD+GTI++ L + Y S + ++D +F+N YN+ + + T F
Sbjct: 75 KIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFL 134
Query: 1627 EE 1628
++
Sbjct: 135 QK 136
Score = 130 (50.8 bits), Expect = 3.2e-12, Sum P(4) = 3.2e-12
Identities = 34/93 (36%), Positives = 48/93 (51%)
Query: 1521 AMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIAPMDL 1575
A N++KL C E+L+ L+ S PF KPVD L DY I+ PMDL
Sbjct: 471 AKNKEKLSDALK---SCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDL 527
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608
GT++ ++ Y+S +F DV+ +F N YN
Sbjct: 528 GTVKRKMDNREYKSAPEFAADVRLIFTNCYKYN 560
Score = 130 (50.8 bits), Expect = 0.00045, Sum P(4) = 0.00045
Identities = 34/93 (36%), Positives = 48/93 (51%)
Query: 106 AMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIAPMDL 160
A N++KL C E+L+ L+ S PF KPVD L DY I+ PMDL
Sbjct: 471 AKNKEKLSDALK---SCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDL 527
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 193
GT++ ++ Y+S +F DV+ +F N YN
Sbjct: 528 GTVKRKMDNREYKSAPEFAADVRLIFTNCYKYN 560
Score = 93 (37.8 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 30/114 (26%), Positives = 46/114 (40%)
Query: 1374 TCEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRI 1431
+C +I+ L A PF PVD DL T++ + NR Y+
Sbjct: 483 SCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSA 542
Query: 1432 TSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVPVVYH 1483
DVR + N K+N P ++V R + D+ +R P+ PV +H
Sbjct: 543 PEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVANAAHHH 596
Score = 70 (29.7 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 32/142 (22%), Positives = 57/142 (40%)
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVA 1391
EPP + EP + V+P I P P E P + + I T ++ + +
Sbjct: 5 EPPPRYEPPVEPVNGI-VQPPVI------P-PAERPGRNTNQLQYLIKTVMKVIWKHHFS 56
Query: 1392 EPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFN 1449
PF PVD + D+ T++ R +N +Y D + N +N
Sbjct: 57 WPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYN 116
Query: 1450 EPHSNIVKYARIITDLLLRIIK 1471
+P ++V A+ + + L+ I+
Sbjct: 117 KPGEDVVVMAQTLEKVFLQKIE 138
Score = 62 (26.9 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 892 LVDLNGTPY-PPEVQRLVPGRENADDTEL----LPDITTNDDGHVEIVEGSERNGERPVE 946
L+ N Y PP+ + GR+ D E+ +PD + H +G
Sbjct: 551 LIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVANAAHHH--GHGHGHGHGHGH 608
Query: 947 VEGQRHYNDHGHVYIQTSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQ 1006
G H + HGH Y +S + S ++ E S+ TE S S +A+ K +L Q
Sbjct: 609 GHGHGHGHGHGHGYGGSSSLKHDASDSSSEDSSDTENESNSDEERSARLKMLESKLLGLQ 668
Query: 1007 HKI 1009
+I
Sbjct: 669 EEI 671
Score = 54 (24.1 bits), Expect = 0.00045, Sum P(4) = 0.00045
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK 56
T++ R +N +Y D + N +N+P ++V A+ + + L+ I+
Sbjct: 85 TIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIE 138
Score = 52 (23.4 bits), Expect = 3.2e-12, Sum P(4) = 3.2e-12
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSE 1819
+ S+ +S + EN E+++ E+ + +LK+L K G Q E
Sbjct: 634 DSSSEDSSDTEN---ESNSDEERSARLKMLESKLLGLQEE 670
Score = 43 (20.2 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1758 AEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKLK 1807
A PV+S+S + S+S+S + E D E+P +K K
Sbjct: 1075 ANPVSSSSSSSDSSSSSSS---DSSSSDSSDSEAG----DGDERPPRKKK 1117
Score = 42 (19.8 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQ 812
I+ ++ S K GY W F+ V+ +
Sbjct: 487 ILKELFSKKHSGYAWPFYKPVDAE 510
Score = 41 (19.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 613 RIRPG---NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEH 662
+++PG NA + SF+ G +AT +R+ S LG ++ EH
Sbjct: 1236 KVQPGGPINAALPPHSFAGGTATVATSQSSGGIRIASNLHKPSGLGGGDLGEH 1288
Score = 40 (19.1 bits), Expect = 3.2e-12, Sum P(4) = 3.2e-12
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 874 PTYDEVTNLPPHLMP 888
P+ ++ +PPH +P
Sbjct: 254 PSIPPISTMPPHTVP 268
>MGI|MGI:1923998 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=IDA] [GO:0001890 "placenta
development" evidence=IMP] [GO:0001974 "blood vessel remodeling"
evidence=TAS] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003349 "epicardium-derived cardiac endothelial cell
differentiation" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=TAS] [GO:0060979 "vasculogenesis
involved in coronary vascular morphogenesis" evidence=TAS]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 MGI:MGI:1923998
Pfam:PF00505 GO:GO:0005634 GO:GO:0045893 GO:GO:0008285
GO:GO:0000776 GO:GO:0003677 GO:GO:0003007 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001974 GO:GO:0001890
GO:GO:0060979 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0060948 EMBL:AC154446
HOVERGEN:HBG079860 OrthoDB:EOG41NTK5 ChiTaRS:PBRM1 EMBL:AC154727
EMBL:BC023452 EMBL:BC029037 EMBL:BC055456 EMBL:BC055708
EMBL:BF451491 EMBL:CN530699 EMBL:AK009582 EMBL:AK030781
EMBL:AK030252 EMBL:AK166588 IPI:IPI00856358 IPI:IPI01023209
UniGene:Mm.27913 PDB:2YQD PDBsum:2YQD ProteinModelPortal:Q8BSQ9
SMR:Q8BSQ9 DIP:DIP-48885N IntAct:Q8BSQ9 STRING:Q8BSQ9
PhosphoSite:Q8BSQ9 PaxDb:Q8BSQ9 PRIDE:Q8BSQ9
Ensembl:ENSMUST00000112094 Ensembl:ENSMUST00000112095
GeneTree:ENSGT00390000003017 EvolutionaryTrace:Q8BSQ9 Bgee:Q8BSQ9
Genevestigator:Q8BSQ9 GO:GO:0003349 Uniprot:Q8BSQ9
Length = 1634
Score = 143 (55.4 bits), Expect = 4.2e-12, Sum P(4) = 4.2e-12
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 1616
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 569 KIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNE-EGSQVY 608
Score = 143 (55.4 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 201
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 569 KIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNE-EGSQVY 608
Score = 106 (42.4 bits), Expect = 3.5e-11, Sum P(5) = 3.5e-11
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 99 (39.9 bits), Expect = 4.2e-12, Sum P(4) = 4.2e-12
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 99 (39.9 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 1608
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 1609 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 88 (36.0 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 229 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 84 (34.6 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 642 SRKSGVSPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK 701
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
PMD+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 702 KPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 760
Query: 1631 RRLTVRWNSH 1640
R L +SH
Sbjct: 761 RDLEGDEDSH 770
Score = 82 (33.9 bits), Expect = 4.2e-12, Sum P(4) = 4.2e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 230 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 78 (32.5 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N++ Y
Sbjct: 70 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAY 126
Score = 68 (29.0 bits), Expect = 3.5e-11, Sum P(5) = 3.5e-11
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 401 GQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 460
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 461 RYNVPNSAI--YKRVL 474
Score = 65 (27.9 bits), Expect = 6.1e-09, Sum P(4) = 6.1e-09
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +R + +N+ Y + + D+ + NA+++N P+S I Y R++
Sbjct: 430 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRVL 474
Score = 61 (26.5 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 705 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 764
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 765 GDEDSHVPNVTLLIQELIHN 784
Score = 57 (25.1 bits), Expect = 8.2e-07, Sum P(6) = 8.2e-07
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 567 DLKIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELG 626
Query: 1475 PV 1476
P+
Sbjct: 627 PL 628
Score = 44 (20.5 bits), Expect = 2.2e-06, Sum P(5) = 2.2e-06
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 794 DDEGRCYSDSLAEIPAVDPN 813
Score = 43 (20.2 bits), Expect = 4.2e-12, Sum P(4) = 4.2e-12
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1805 KLKVLYPKRRGQQSEDGSG 1823
KLK KR ++SED SG
Sbjct: 918 KLKREEEKREAEKSEDSSG 936
Score = 43 (20.2 bits), Expect = 3.5e-11, Sum P(5) = 3.5e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 94 LMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 43 (20.2 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEV 904
PPH +PP + L G P PP V
Sbjct: 1464 PPHHLPPG-VPGLPGIP-PPGV 1483
Score = 41 (19.5 bits), Expect = 2.2e-06, Sum P(5) = 2.2e-06
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R ++ YRR+ Q + + A + N S I + A + +RI E
Sbjct: 825 IRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIRDE 878
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF--C-PLEV 573
K + + NL+ P+S ++G +++ +F C P E+
Sbjct: 1213 KEVFLSNLEETCPMSCILGKCAVLSFKDFLSCRPTEI 1249
Score = 40 (19.1 bits), Expect = 9.3e-06, Sum P(5) = 9.3e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 598 RHYNEEGSQVYNDAHI 613
Score = 39 (18.8 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555
S +S D + + G K R+ NL T+ PI+V
Sbjct: 12 SSSVSGDFDDGHHSVPTPGPSRKRRRLSNLPTVDPIAV 49
Score = 39 (18.8 bits), Expect = 6.5e-06, Sum P(5) = 6.5e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1239 LAVMKPNG--KLTNEFFNIKYHDMPDVIDFFVL 1269
L + KP K+ + KY D+ +++ FV+
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVM 730
Score = 38 (18.4 bits), Expect = 8.1e-06, Sum P(5) = 8.1e-06
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1408 ELSRLVGTEWRNL 1420
Score = 37 (18.1 bits), Expect = 8.2e-07, Sum P(6) = 8.2e-07
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 974 NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHKIVVE 1012
+G+S ++ TS +G+A KN K+ +V+E
Sbjct: 495 DGDSMISS-ATSDTGSAKRKSKKNIRKQRMKILFNVVLE 532
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 200 (75.5 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 90/385 (23%), Positives = 161/385 (41%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 173
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G + I +W+ T + L GH ITG+++ PL +N Y+AS+S DG + W
Sbjct: 174 ASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW 233
Query: 592 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 634
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 234 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 293
Query: 635 TG--SGDHHVRVYKMDGVDSPL------GIL-EVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
T S D+ +R + ++ + G L E++E + ++ R VSGS D
Sbjct: 294 TMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDF 353
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W + K + T + + V + R ++ + +F+
Sbjct: 354 TLFLW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IVASASFDKS 397
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 398 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 450
Query: 806 HNIVEGQGEGALFDGKWSPDGTTCA 830
+ G + ++ WSPDG A
Sbjct: 451 TTDLPGHAD-EVYAVDWSPDGQRVA 474
Score = 155 (59.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + VLF ++ + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 372 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 431
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 432 VSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 486
Score = 125 (49.1 bits), Expect = 0.00060, P = 0.00060
Identities = 81/357 (22%), Positives = 140/357 (39%)
Query: 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIAID 527
H+ GH V + + G+ + +G + I LW G + TL G S I+ ++ +
Sbjct: 151 HFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWE 210
Query: 528 NRNI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582
++ +A+ + D ++R+W+ +L GH +T C L G L S
Sbjct: 211 PLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT----C-LRWGGDGLLYSA 265
Query: 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642
S D I W+ H+ V+ R G+ H + + L TG+ +
Sbjct: 266 SQDRTIKVWRA-----------HDGVLC--RTLQGHGHWVNTMALSTDYALRTGAFEPAE 312
Query: 643 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702
+ L L+ E S + + ++ R VSGS D T +W + R+
Sbjct: 313 ATVNAQDLQGSLKELK-ERASSRYNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLARM 370
Query: 703 D-----MNTCL--PHTKETSDET-NKKIK-------------------VTMVAWDASDRW 735
+N L P ++ + + +K IK V +AW A R
Sbjct: 371 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 430
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+++ + + +K+WD L L GH +EV+ ++ P RV S G D + IW
Sbjct: 431 LVSGSS-DSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVA-SGGKDKCLRIW 485
>UNIPROTKB|E7EVG2 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC104446
HGNC:HGNC:30064 ChiTaRS:PBRM1 EMBL:AC112215 IPI:IPI00916875
ProteinModelPortal:E7EVG2 SMR:E7EVG2 Ensembl:ENST00000423351
UCSC:uc003dez.1 ArrayExpress:E7EVG2 Bgee:E7EVG2 Uniprot:E7EVG2
Length = 1461
Score = 147 (56.8 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
I +R D Y ++D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVYNDAHILEKLLKEKRKEL 625
Score = 147 (56.8 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
I +R D Y ++D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVYNDAHILEKLLKEKRKEL 625
Score = 106 (42.4 bits), Expect = 5.0e-12, Sum P(4) = 5.0e-12
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 106 (42.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 100 (40.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 1608
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 1609 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 100 (40.3 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 88 (36.0 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 229 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 84 (34.6 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 642 SRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK 701
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
PMD+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 702 KPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 760
Query: 1631 RRLTVRWNSH 1640
R L +SH
Sbjct: 761 RDLEGDEDSH 770
Score = 82 (33.9 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 230 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 81 (33.6 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N+++Y
Sbjct: 70 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 126
Score = 67 (28.6 bits), Expect = 5.0e-12, Sum P(4) = 5.0e-12
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 401 GQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 460
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 461 RYNVPNSAI--YKRVL 474
Score = 65 (27.9 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +R + +N+ Y + + D+ + NA+++N P+S I Y R++
Sbjct: 430 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRVL 474
Score = 61 (26.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 705 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 764
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 765 GDEDSHVPNVTLLIQELIHN 784
Score = 56 (24.8 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 567 DLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELG 626
Query: 1475 PV 1476
P+
Sbjct: 627 PL 628
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
DL ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 93 DLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 44 (20.5 bits), Expect = 5.0e-12, Sum P(4) = 5.0e-12
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 94 LMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 794 DDEGRCYSDSLAEIPAVDPN 813
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q + + A + N S I + A + ++I E
Sbjct: 825 IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 878
Score = 40 (19.1 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555
S +S D + + G K R+ NL T+ PI+V
Sbjct: 12 SSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAV 49
Score = 40 (19.1 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 598 RHYNEEGSQVYNDAHI 613
Score = 39 (18.8 bits), Expect = 8.0e-07, Sum P(4) = 8.0e-07
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1239 LAVMKPNG--KLTNEFFNIKYHDMPDVIDFFVL 1269
L + KP K+ + KY D+ +++ FV+
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVM 730
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(5) = 2.3e-06
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 912 ENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYND 955
+N++D+ + + VE S NGE Q HYND
Sbjct: 1113 DNSEDSRAEDNFNLEKEKEDVPVEMS--NGEPGCHYFEQLHYND 1154
Score = 38 (18.4 bits), Expect = 2.3e-06, Sum P(5) = 2.3e-06
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1407 ELSRLVGTEWRNL 1419
Score = 37 (18.1 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 974 NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHKIVVE 1012
+G+S ++ TS +G+A KN K+ +V+E
Sbjct: 495 DGDSMISS-ATSDTGSAKRKSKKNIRKQRMKILFNVVLE 532
Score = 37 (18.1 bits), Expect = 3.6e-06, Sum P(5) = 3.6e-06
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF--C-PLEV 573
K + + NL+ P++ ++G +++ +F C P E+
Sbjct: 1212 KEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEI 1248
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 198 (74.8 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 91/385 (23%), Positives = 162/385 (42%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTL 122
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G + I +W+ T + VL GH ITG+++ PL N Y+AS+S DG + W
Sbjct: 123 ASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVW 182
Query: 592 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 634
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 183 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 242
Query: 635 TG--SGDHHVRVYKMDGVDSPL------GIL-EVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
T S D+ +R + ++ + G L E+++ + + ++ R VSGS D
Sbjct: 243 TMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDF 302
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W + K + T + + V + R +I + +F+
Sbjct: 303 TLFMW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IIASASFDKS 346
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 347 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQKLAAD--- 402
Query: 806 HNIVEGQGEGALFDGKWSPDGTTCA 830
+ G + ++ WSPDG A
Sbjct: 403 ---LPGHAD-EVYAVDWSPDGQRVA 423
Score = 156 (60.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + VLF +I + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 321 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 380
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 381 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 435
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 177 (67.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 43/166 (25%), Positives = 71/166 (42%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 639
D+ K + P G +++ F P LA+GS D
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSD 210
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
LA+ D T+++W+L +S GH G + V F P E LAS S+D
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSD 210
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 177 (67.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 21 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 80
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 136
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 137 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 180
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00085
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 106 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 165
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
LA+ D T+++W+L +S GH G + V F P E
Sbjct: 166 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 205
>UNIPROTKB|F1NLL8 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0008285 GO:GO:0000776
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 IPI:IPI00571677 OMA:WLKVGDC
GeneTree:ENSGT00390000003017 EMBL:AADN02052994
Ensembl:ENSGALT00000002415 Uniprot:F1NLL8
Length = 1630
Score = 145 (56.1 bits), Expect = 5.7e-12, Sum P(5) = 5.7e-12
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ M ++++K +N E RE +C + F K D+PDY KI++ PMDL
Sbjct: 510 RKSKKNMRKQRMKILYNAVLEARESGTGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 566
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
I +R D Y + D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 567 KMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNE-EGSQVYNDAHMLEKILKEKRKEL 623
Score = 145 (56.1 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ M ++++K +N E RE +C + F K D+PDY KI++ PMDL
Sbjct: 510 RKSKKNMRKQRMKILYNAVLEARESGTGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 566
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
I +R D Y + D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 567 KMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNE-EGSQVYNDAHMLEKILKEKRKEL 623
Score = 110 (43.8 bits), Expect = 3.7e-11, Sum P(6) = 3.7e-11
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 105 EAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPM 158
E + ++L P K ++LE + V + SE F+K K+ +PDY I+ P+
Sbjct: 166 EGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPI 225
Query: 159 DLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
DL TI + ++ Y+S KD+ + N++ YN+
Sbjct: 226 DLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNE 261
Score = 102 (41.0 bits), Expect = 5.7e-12, Sum P(5) = 5.7e-12
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SEPF + K +PDY + + P+ L IR +L+ YE+ D+ +F N++ YN
Sbjct: 403 SEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNV 462
Query: 195 NKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY ++ + + + L R
Sbjct: 463 -PNSAIYKRVLKMQQVMQAKKKELARR 488
Score = 102 (41.0 bits), Expect = 4.7e-06, Sum P(5) = 4.7e-06
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
SEPF + K +PDY + + P+ L IR +L+ YE+ D+ +F N++ YN
Sbjct: 403 SEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNV 462
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY ++ + + + L R
Sbjct: 463 -PNSAIYKRVLKMQQVMQAKKKELARR 488
Score = 89 (36.4 bits), Expect = 2.8e-10, Sum P(5) = 2.8e-10
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 226 DLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAI 273
Score = 83 (34.3 bits), Expect = 5.7e-12, Sum P(5) = 5.7e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 227 LKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAI 273
Score = 79 (32.9 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 31/130 (23%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 640 SRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIK 699
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
P+D+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 700 KPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 758
Query: 1631 RRLTVRWNSH 1640
R + +SH
Sbjct: 759 REIEGDEDSH 768
Score = 79 (32.9 bits), Expect = 2.8e-10, Sum P(5) = 2.8e-10
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N++ Y
Sbjct: 71 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAY 127
Score = 71 (30.1 bits), Expect = 3.7e-11, Sum P(6) = 3.7e-11
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G ++EPF + L +RA+ +N Y + + D+ + NA+
Sbjct: 399 GQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAK 458
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 459 RYNVPNSAI--YKRVL 472
Score = 69 (29.3 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +RA+ +N Y + + D+ + NA+++N P+S I Y R++
Sbjct: 428 LQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAI--YKRVL 472
Score = 63 (27.2 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +E
Sbjct: 703 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRE 760
Score = 50 (22.7 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y + D++ + NA +NE S + A ++ +L KE
Sbjct: 565 DLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELG 624
Query: 1475 PV 1476
P+
Sbjct: 625 PL 626
Score = 45 (20.9 bits), Expect = 4.6e-07, Sum P(5) = 4.6e-07
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q ++ + A + N S I + A + ++I E
Sbjct: 823 IRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 876
Score = 44 (20.5 bits), Expect = 4.6e-07, Sum P(5) = 4.6e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 792 DDEGRCYSDSLAEIPAVDPN 811
Score = 43 (20.2 bits), Expect = 5.7e-12, Sum P(5) = 5.7e-12
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1805 KLKVLYPKRRGQQSEDGSG 1823
KLK KR ++SED SG
Sbjct: 916 KLKREEEKREAEKSEDSSG 934
Score = 42 (19.8 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 870 GLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEV 904
G +P + V PPH +PP + G P PP V
Sbjct: 1452 GSMQPLHPGVP--PPHQLPP----GMPGIP-PPGV 1479
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF-C--PLEVN 574
K + + NL+ P+S ++G +++ +F C P E++
Sbjct: 1212 KEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEIS 1249
Score = 39 (18.8 bits), Expect = 3.7e-11, Sum P(6) = 3.7e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + +L LR E
Sbjct: 95 LMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNE 151
Score = 39 (18.8 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 1147 IPEEVPDIYKPSDWLAE---VVPKKAPYYPQMGDEVMFFKQGYQKYVD 1191
+PE+ D+ P L+ + PKK+ Y M ++ + + Y D
Sbjct: 626 LPED-DDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTD 672
Score = 38 (18.4 bits), Expect = 5.7e-12, Sum P(5) = 5.7e-12
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKL 1806
E+ E +++ +PE D P KL
Sbjct: 613 EKILKEKRKELGPLPEDDDVASPKLKL 639
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(5) = 3.3e-06
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1407 ELSRLVGTEWRNL 1419
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 596 RHYNEEGSQVYNDAHM 611
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(5) = 3.3e-06
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 658 EVEEHSDKVDSIQWSHSHLRFVSGSRD 684
E E+HSD +D + S L D
Sbjct: 1106 EEEKHSDTLDDSKVGESILHLEKDKED 1132
>UNIPROTKB|Q90941 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 EMBL:X90849
IPI:IPI00571677 PIR:JC5056 RefSeq:NP_990496.1 UniGene:Gga.3045
PDB:1W4S PDBsum:1W4S ProteinModelPortal:Q90941 SMR:Q90941
STRING:Q90941 PRIDE:Q90941 GeneID:396074 KEGG:gga:396074 CTD:55193
HOGENOM:HOG000045795 HOVERGEN:HBG079860 InParanoid:Q90941 KO:K11757
OrthoDB:EOG41NTK5 EvolutionaryTrace:Q90941 NextBio:20816133
Uniprot:Q90941
Length = 1633
Score = 145 (56.1 bits), Expect = 5.8e-12, Sum P(5) = 5.8e-12
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ M ++++K +N E RE +C + F K D+PDY KI++ PMDL
Sbjct: 510 RKSKKNMRKQRMKILYNAVLEARESGTGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 566
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
I +R D Y + D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 567 KMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNE-EGSQVYNDAHMLEKILKEKRKEL 623
Score = 145 (56.1 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ M ++++K +N E RE +C + F K D+PDY KI++ PMDL
Sbjct: 510 RKSKKNMRKQRMKILYNAVLEARESGTGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 566
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
I +R D Y + D+K +F N+R+YN+ + S++Y L + +E + L
Sbjct: 567 KMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNE-EGSQVYNDAHMLEKILKEKRKEL 623
Score = 110 (43.8 bits), Expect = 3.8e-11, Sum P(6) = 3.8e-11
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 105 EAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVIAPM 158
E + ++L P K ++LE + V + SE F+K K+ +PDY I+ P+
Sbjct: 166 EGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPI 225
Query: 159 DLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
DL TI + ++ Y+S KD+ + N++ YN+
Sbjct: 226 DLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNE 261
Score = 102 (41.0 bits), Expect = 5.8e-12, Sum P(5) = 5.8e-12
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SEPF + K +PDY + + P+ L IR +L+ YE+ D+ +F N++ YN
Sbjct: 403 SEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNV 462
Query: 195 NKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY ++ + + + L R
Sbjct: 463 -PNSAIYKRVLKMQQVMQAKKKELARR 488
Score = 102 (41.0 bits), Expect = 4.7e-06, Sum P(5) = 4.7e-06
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
SEPF + K +PDY + + P+ L IR +L+ YE+ D+ +F N++ YN
Sbjct: 403 SEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNV 462
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY ++ + + + L R
Sbjct: 463 -PNSAIYKRVLKMQQVMQAKKKELARR 488
Score = 89 (36.4 bits), Expect = 2.9e-10, Sum P(5) = 2.9e-10
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 226 DLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAI 273
Score = 83 (34.3 bits), Expect = 5.8e-12, Sum P(5) = 5.8e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 227 LKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAI 273
Score = 79 (32.9 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 31/130 (23%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 640 SRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIK 699
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
P+D+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 700 KPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 758
Query: 1631 RRLTVRWNSH 1640
R + +SH
Sbjct: 759 REIEGDEDSH 768
Score = 79 (32.9 bits), Expect = 2.9e-10, Sum P(5) = 2.9e-10
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N++ Y
Sbjct: 71 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAY 127
Score = 71 (30.1 bits), Expect = 3.8e-11, Sum P(6) = 3.8e-11
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G ++EPF + L +RA+ +N Y + + D+ + NA+
Sbjct: 399 GQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAK 458
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 459 RYNVPNSAI--YKRVL 472
Score = 69 (29.3 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +RA+ +N Y + + D+ + NA+++N P+S I Y R++
Sbjct: 428 LQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAI--YKRVL 472
Score = 63 (27.2 bits), Expect = 2.7e-08, Sum P(5) = 2.7e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +E
Sbjct: 703 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRE 760
Score = 50 (22.7 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y + D++ + NA +NE S + A ++ +L KE
Sbjct: 565 DLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELG 624
Query: 1475 PV 1476
P+
Sbjct: 625 PL 626
Score = 46 (21.3 bits), Expect = 5.8e-07, Sum P(5) = 5.8e-07
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 870 GLFEPTYDEVTNLPPHLMPPPFLVDLNGTPYPPEV 904
G +P + V PPH +PP + + G P PP V
Sbjct: 1452 GSMQPLHPGVP--PPHQLPPG-MPGIPGIP-PPGV 1482
Score = 45 (20.9 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q ++ + A + N S I + A + ++I E
Sbjct: 823 IRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 876
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 792 DDEGRCYSDSLAEIPAVDPN 811
Score = 43 (20.2 bits), Expect = 5.8e-12, Sum P(5) = 5.8e-12
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1805 KLKVLYPKRRGQQSEDGSG 1823
KLK KR ++SED SG
Sbjct: 916 KLKREEEKREAEKSEDSSG 934
Score = 42 (19.8 bits), Expect = 3.3e-08, Sum P(5) = 3.3e-08
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1555 KPVDKLDHPDY 1565
+PV K HPDY
Sbjct: 1393 RPVIKAQHPDY 1403
Score = 41 (19.5 bits), Expect = 5.8e-07, Sum P(5) = 5.8e-07
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF-C--PLEVN 574
K + + NL+ P+S ++G +++ +F C P E++
Sbjct: 1212 KEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEIS 1249
Score = 39 (18.8 bits), Expect = 3.8e-11, Sum P(6) = 3.8e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + +L LR E
Sbjct: 95 LMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNE 151
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(5) = 2.7e-08
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 1147 IPEEVPDIYKPSDWLAE---VVPKKAPYYPQMGDEVMFFKQGYQKYVD 1191
+PE+ D+ P L+ + PKK+ Y M ++ + + Y D
Sbjct: 626 LPED-DDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTD 672
Score = 38 (18.4 bits), Expect = 5.8e-12, Sum P(5) = 5.8e-12
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKL 1806
E+ E +++ +PE D P KL
Sbjct: 613 EKILKEKRKELGPLPEDDDVASPKLKL 639
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(5) = 3.3e-06
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1407 ELSRLVGTEWRNL 1419
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 596 RHYNEEGSQVYNDAHM 611
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(5) = 3.3e-06
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 658 EVEEHSDKVDSIQWSHSHLRFVSGSRD 684
E E+HSD +D + S L D
Sbjct: 1106 EEEKHSDTLDDSKVGESILHLEKDKED 1132
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 173 (66.0 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 548 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 605
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 606 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 657
Query: 590 FWKYK 594
W K
Sbjct: 658 IWDIK 662
Score = 149 (57.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 592 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 648
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 649 S-GNADSTVKIWDIKTGQCLQTLQGPHKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 701
Query: 591 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 630
W + I V E V++ RIR N ++C+ S G
Sbjct: 702 WDLRTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 744
Score = 118 (46.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 471 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 528
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 529 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 562
Score = 109 (43.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 474 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 512 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 568
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 569 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 619
Score = 96 (38.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 557 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 610
Query: 784 GHDGLIIIWDI 794
D I +WD+
Sbjct: 611 SLDTSIRVWDV 621
Score = 83 (34.3 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKG---HTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
++ + N + +KIWD G +Q L+G H + V L+ F+ ++++ DG + +W
Sbjct: 646 ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQ---FNKNFVITSSDDGTVKLW 702
Query: 793 DILSSKQRGYKWFHNIV--EGQGEGAL 817
D+ R ++ N+V E G G +
Sbjct: 703 DL-----RTGEFIRNLVTLESGGSGGV 724
Score = 78 (32.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 582 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 632
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
H + +E +L+S D + IWDI
Sbjct: 633 HQSLTSGME---LKDNILVSGNADSTVKIWDI 661
Score = 60 (26.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 32/132 (24%), Positives = 61/132 (46%)
Query: 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 689
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 604 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 658
Query: 690 WYYKCSQWRFIRLDMNTCL-PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKI 748
W K Q + T PH +++ VT + ++ + +VIT+ + + +K+
Sbjct: 659 WDIKTGQC------LQTLQGPHKHQSA--------VTCLQFNKN--FVITSSD-DGTVKL 701
Query: 749 WDAFNGDLVQVL 760
WD G+ ++ L
Sbjct: 702 WDLRTGEFIRNL 713
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 198 (74.8 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 89/385 (23%), Positives = 161/385 (41%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 171
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G + + +W+ T + L GH ITG+++ PL +N Y+AS+S DG + W
Sbjct: 172 ASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW 231
Query: 592 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 634
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Query: 635 TG--SGDHHVRVYKMDGVDSPL------GIL-EVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
T S D+ +R + ++ + G L E++E + ++ R VSGS D
Sbjct: 292 TMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDF 351
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W + K + T + + V + R ++ + +F+
Sbjct: 352 TLFLW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IVASASFDKS 395
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 448
Query: 806 HNIVEGQGEGALFDGKWSPDGTTCA 830
+ G + ++ WSPDG A
Sbjct: 449 ATDLPGHAD-EVYAVDWSPDGQRVA 472
Score = 155 (59.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + VLF ++ + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 430 VSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 484
Score = 124 (48.7 bits), Expect = 0.00076, P = 0.00076
Identities = 46/182 (25%), Positives = 81/182 (44%)
Query: 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 571
++L G S + +A LA+G+ D T+R W+L T P GH+ + +++ P
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP- 166
Query: 572 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGG 630
+G LAS +G + W + + +T+ H + P H+ +P
Sbjct: 167 --DG-KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEP--LHM-----NPEC 216
Query: 631 LFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 688
++A+ S D VRV+ D+ G E + H+ V ++W L + S S+D T
Sbjct: 217 RYVASSSKDGSVRVW-----DTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIK 270
Query: 689 IW 690
+W
Sbjct: 271 VW 272
Score = 123 (48.4 bits), Expect = 0.00098, P = 0.00098
Identities = 80/357 (22%), Positives = 140/357 (39%)
Query: 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIAID 527
H+ GH V + + G+ + +G + + LW G + TL G S I+ ++ +
Sbjct: 149 HFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWE 208
Query: 528 NRNI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582
++ +A+ + D ++R+W+ +L GH +T C L G L S
Sbjct: 209 PLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT----C-LRWGGDGLLYSA 263
Query: 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642
S D I W+ H+ V+ R G+ H + + L TG+ +
Sbjct: 264 SQDRTIKVWRA-----------HDGVLC--RTLQGHGHWVNTMALSTDYALRTGAFEPAE 310
Query: 643 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702
+ L L+ E S + + ++ R VSGS D T +W + R+
Sbjct: 311 ATVNAQDLQGSLKELK-ERASSRYNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLARM 368
Query: 703 D-----MNTCL--PHTKETSDET-NKKIK-------------------VTMVAWDASDRW 735
+N L P ++ + + +K IK V +AW A R
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+++ + + +K+WD L L GH +EV+ ++ P RV S G D + IW
Sbjct: 429 LVSGSS-DSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA-SGGKDKCLRIW 483
>UNIPROTKB|C9JJU3 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 HOGENOM:HOG000231200 EMBL:AC114486
HGNC:HGNC:1105 ChiTaRS:BRDT IPI:IPI00645771
ProteinModelPortal:C9JJU3 SMR:C9JJU3 STRING:C9JJU3
Ensembl:ENST00000426141 ArrayExpress:C9JJU3 Bgee:C9JJU3
Uniprot:C9JJU3
Length = 462
Score = 136 (52.9 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E +N KK R N ++V L+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 18 EYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLN 77
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L Y + ++D +F N YN+ I +M L + + L ++
Sbjct: 78 TIKKRLENKYYAKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKLFMQKLSQM 133
Score = 136 (52.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E +N KK R N ++V L+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 18 EYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLN 77
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L Y + ++D +F N YN+ I +M L + + L ++
Sbjct: 78 TIKKRLENKYYAKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKLFMQKLSQM 133
Score = 120 (47.3 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDY 1565
P V ++ N K + C E+L+ + PF PVD L +Y
Sbjct: 250 PKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNY 309
Query: 1566 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 1625
+V PMDLGTI+E++ Y+ F DV+ +F N YN ++ M L +
Sbjct: 310 YDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDV 368
Query: 1626 AEEHLRRLTV 1635
E H ++ +
Sbjct: 369 FETHFSKIPI 378
Score = 120 (47.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDY 150
P V ++ N K + C E+L+ + PF PVD L +Y
Sbjct: 250 PKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNY 309
Query: 151 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 210
+V PMDLGTI+E++ Y+ F DV+ +F N YN ++ M L +
Sbjct: 310 YDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDV 368
Query: 211 AEEHLRRLTV 220
E H ++ +
Sbjct: 369 FETHFSKIPI 378
Score = 102 (41.0 bits), Expect = 5.1e-10, Sum P(4) = 5.1e-10
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C +I+ + S A PF PVD++ DL T++ + N+ Y+
Sbjct: 276 CSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAY 335
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEP-NPVD-VPVVY 1482
DVR + N K+N P +V AR++ D+ K P PV+ +P+ Y
Sbjct: 336 KFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCY 388
Score = 86 (35.3 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 26/108 (24%), Positives = 52/108 (48%)
Query: 1376 EKIITGLEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITS 1433
+K++ L+++ S + PF PVD Q DL T++ R +N++Y + +
Sbjct: 36 QKVV--LKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASE 93
Query: 1434 AQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVV 1481
D + +N +N+P +IV A+ + L ++ + + P + VV
Sbjct: 94 CIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM-PQEEQVV 140
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 16/66 (24%), Positives = 35/66 (53%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R +N++Y + + D + +N +N+P +IV A+ + L ++ + + P
Sbjct: 76 LNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM-P 134
Query: 61 VDVPVV 66
+ VV
Sbjct: 135 QEEQVV 140
Score = 41 (19.5 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 1795 ETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLSLH 1840
+TD TE ++ G S+D + +++L++ ++H
Sbjct: 390 KTDITETTGRE-NTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVH 434
Score = 40 (19.1 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 1126 PKRVRRHTKVKPIQVSLPKQLIPE 1149
P + + PI+ ++PK ++P+
Sbjct: 233 PTFTEKSVALPPIKENMPKNVLPD 256
>UNIPROTKB|F1MMU3 [details] [associations]
symbol:BRD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006357 GO:GO:0003682
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 OMA:NNNKKPA
EMBL:DAAA02032357 EMBL:DAAA02032358 IPI:IPI00711116
UniGene:Bt.74262 Ensembl:ENSBTAT00000013992 Uniprot:F1MMU3
Length = 722
Score = 141 (54.7 bits), Expect = 8.6e-12, Sum P(3) = 8.6e-12
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 152
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPAKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 153 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 141 (54.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 1567
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPAKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 1568 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 115 (45.5 bits), Expect = 8.6e-12, Sum P(3) = 8.6e-12
Identities = 41/164 (25%), Positives = 70/164 (42%)
Query: 1327 SPWDLEPPKEGKE-ATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDAT----CEKIITG 1381
SP L PK+ K A G P++P + ++L P + R + C+ I+
Sbjct: 263 SPPPLSDPKQAKVVARRESGGRPIKPPK-KDLEDGEVPQHAGKKGRLSEHLRHCDSILKE 321
Query: 1382 LEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVR 1439
+ + A PF PVD + DL+T++ + +R Y D+R
Sbjct: 322 MLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDAQGFAADIR 381
Query: 1440 YLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVPVV 1481
+ +N K+N P +V AR + D+ +R K P+ P + P +
Sbjct: 382 LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPAEAPAL 425
Score = 108 (43.1 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 1552 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L+ DY I+ PMDL T+++++ Y F D++ +F N YN
Sbjct: 333 PFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDAQGFAADIRLMFSNCYKYNP 392
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 393 PDH-EVVAMARKLQDVFEMRFAKM 415
Score = 69 (29.3 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 19/84 (22%), Positives = 36/84 (42%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD + D+ T++ R +N +Y + D + N +
Sbjct: 56 AWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIY 115
Query: 1449 NEPHSNIVKYARIITDLLLRIIKE 1472
N+P +IV A+ + + L+ + +
Sbjct: 116 NKPTDDIVLMAQALEKIFLQKVAQ 139
Score = 47 (21.6 bits), Expect = 8.6e-12, Sum P(3) = 8.6e-12
Identities = 19/97 (19%), Positives = 34/97 (35%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPA---K 1804
P++P + + P A +S S E+E + + EQ +
Sbjct: 416 PDEPAEAPALPAPAAPVVSKGVESSRSSDESSSDSGSSDSEEERATRLAELQEQLKAVHE 475
Query: 1805 KLKVLY------PKRRGQQSEDGSGDNASEMSELKQD 1835
+L L PKR+ ++ E D E + K +
Sbjct: 476 QLAALSQAPVNKPKRKKEKKEKKKKDKDKERHKAKAE 512
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQ 812
I+ ++LS K Y W F+ V+ +
Sbjct: 318 ILKEMLSKKHAAYAWPFYKPVDAE 341
Score = 37 (18.1 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 1780 EESASESQEDENSIP-ET--DTTEQPAKKL--KVLYPKRRGQQSEDGSGDNASEMSELKQ 1834
E S +S DE I ET TT + ++ L K+R S G A EL Q
Sbjct: 599 EPSLRDSNPDEIEIDFETLKPTTLRELERYVKSCLQKKQRKPFSTSGKKQAAKSKEELAQ 658
Query: 1835 D 1835
+
Sbjct: 659 E 659
>UNIPROTKB|E1BCG9 [details] [associations]
symbol:Bt.104862 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042393 "histone binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0006338 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 OMA:GVMKSSD
EMBL:DAAA02007909 IPI:IPI00905420 Ensembl:ENSBTAT00000004850
Uniprot:E1BCG9
Length = 629
Score = 137 (53.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 42/128 (32%), Positives = 62/128 (48%)
Query: 95 RPTAVTRAQR-EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDY 150
R TA+ E +N KK R N ++V L+ LW S PF++PVD KL PDY
Sbjct: 9 RQTAIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDY 68
Query: 151 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 210
I+ PMDL TI++ L Y + ++D +F N YN+ I +M L +
Sbjct: 69 YTIIKNPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKL 127
Query: 211 AEEHLRRL 218
+ L ++
Sbjct: 128 FRQKLSQM 135
Score = 137 (53.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 42/128 (32%), Positives = 62/128 (48%)
Query: 1510 RPTAVTRAQR-EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDY 1565
R TA+ E +N KK R N ++V L+ LW S PF++PVD KL PDY
Sbjct: 9 RQTAIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDY 68
Query: 1566 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 1625
I+ PMDL TI++ L Y + ++D +F N YN+ I +M L +
Sbjct: 69 YTIIKNPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKL 127
Query: 1626 AEEHLRRL 1633
+ L ++
Sbjct: 128 FRQKLSQM 135
Score = 121 (47.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 1375 CEKIITGLEEVMG---LSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYR 1429
C +I L+E++G LS A PF PVD++ DL T++A+ N+ Y+
Sbjct: 280 CSEI---LKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYK 336
Query: 1430 RITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD-VPVVY 1482
DVR + N K+N P +V AR++ D+ + K P+ PV+ +PV Y
Sbjct: 337 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVESMPVCY 392
Score = 115 (45.5 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF PVD L +Y IV PMDLGTI+ ++ Y+ +F DV+ +F N YN
Sbjct: 298 PFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYKDAYEFAADVRLMFMNCYKYNP 357
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M L + E H ++
Sbjct: 358 PDH-EVVTMARMLQDVFEMHFAKI 380
Score = 73 (30.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 29/134 (21%), Positives = 59/134 (44%)
Query: 1355 QELLYHPRPDEWPQGDRDATCEKIITGLEEVM--GL---SVAEPFLVPVDISQXXXXXXX 1409
Q + +P P E+ ++ + L++V+ L S + PF PVD +
Sbjct: 10 QTAIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYY 69
Query: 1410 XXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLL 1467
DL T++ R ++++Y + + D + +N +N+P +IV A+ + L
Sbjct: 70 TIIKNPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFR 129
Query: 1468 RIIKEPNPVDVPVV 1481
+ + + P + VV
Sbjct: 130 QKLSQM-PQEEQVV 142
Score = 61 (26.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 15/66 (22%), Positives = 34/66 (51%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R ++++Y + + D + +N +N+P +IV A+ + L + + + P
Sbjct: 78 LNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM-P 136
Query: 61 VDVPVV 66
+ VV
Sbjct: 137 QEEQVV 142
Score = 42 (19.8 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 1759 EPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKLK 1807
EPV S E S+ S ED +S D Q KL+
Sbjct: 383 EPVESMPVCYVKTDTTKTLGRESSSEASSEDNSSGDSEDERVQRLAKLQ 431
>UNIPROTKB|Q15059 [details] [associations]
symbol:BRD3 "Bromodomain-containing protein 3" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 EMBL:CH471090 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 PROSITE:PS51525 HOGENOM:HOG000231200
HOVERGEN:HBG004896 EMBL:D26362 EMBL:AY513270 EMBL:AL445931
EMBL:BC032124 EMBL:Z81330 IPI:IPI00014266 IPI:IPI00410716
RefSeq:NP_031397.1 UniGene:Hs.522472 UniGene:Hs.654869 PDB:2E7N
PDB:2NXB PDB:2OO1 PDB:2YW5 PDB:3S91 PDB:3S92 PDBsum:2E7N
PDBsum:2NXB PDBsum:2OO1 PDBsum:2YW5 PDBsum:3S91 PDBsum:3S92
ProteinModelPortal:Q15059 SMR:Q15059 IntAct:Q15059 STRING:Q15059
PhosphoSite:Q15059 DMDM:12643726 PaxDb:Q15059 PRIDE:Q15059
DNASU:8019 Ensembl:ENST00000303407 Ensembl:ENST00000357885
Ensembl:ENST00000371834 GeneID:8019 KEGG:hsa:8019 UCSC:uc004cew.3
UCSC:uc004cex.2 CTD:8019 GeneCards:GC09M136897 HGNC:HGNC:1104
HPA:HPA051830 MIM:601541 neXtProt:NX_Q15059 PharmGKB:PA25415
InParanoid:Q15059 KO:K11721 OMA:NNNKKPA OrthoDB:EOG476K03
BindingDB:Q15059 ChEMBL:CHEMBL1795186 EvolutionaryTrace:Q15059
GenomeRNAi:8019 NextBio:30578 ArrayExpress:Q15059 Bgee:Q15059
CleanEx:HS_BRD3 Genevestigator:Q15059 GermOnline:ENSG00000169925
Uniprot:Q15059
Length = 726
Score = 142 (55.0 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 152
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 153 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 142 (55.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 1567
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 1568 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 120 (47.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 42/164 (25%), Positives = 71/164 (43%)
Query: 1327 SPWDLEPPKEGKE-ATEPGGSLPVEP--EEIQ--ELLYHPRPDEWPQGDRDATCEKIITG 1381
SP L PK+ K A G P++P ++++ E+ H + + C+ I+
Sbjct: 263 SPPPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGK-KGKLSEHLRYCDSILRE 321
Query: 1382 LEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVR 1439
+ + A PF PVD + DL+T++ + R Y DVR
Sbjct: 322 MLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVR 381
Query: 1440 YLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVPVV 1481
+ +N K+N P +V AR + D+ +R K P+ PV+ P +
Sbjct: 382 LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPVEAPAL 425
Score = 114 (45.2 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 1552 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L+ DY I+ PMDL T++ ++ G Y F DV+ +F N YN
Sbjct: 333 PFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNP 392
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 393 PDH-EVVAMARKLQDVFEMRFAKM 415
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 10/54 (18%), Positives = 18/54 (33%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
P++P + + P A +S S E+E + + EQ
Sbjct: 416 PDEPVEAPALPAPAAPMVSKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQ 469
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQ 812
I+ ++LS K Y W F+ V+ +
Sbjct: 318 ILREMLSKKHAAYAWPFYKPVDAE 341
Score = 39 (18.8 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
ES+ S+E + +D+ E+ A +L L
Sbjct: 438 ESSRSSEESSSDSGSSDSEEERATRLAEL 466
Score = 37 (18.1 bits), Expect = 3.0e-10, Sum P(4) = 3.0e-10
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 1780 EESASESQEDENSIP-ET--DTTEQPAKKL--KVLYPKRRGQQSEDGSGDNASEMSELKQ 1834
E S +S DE I ET TT + ++ L K+R S G A EL Q
Sbjct: 603 EPSLRDSNPDEIEIDFETLKPTTLRELERYVKSCLQKKQRKPFSASGKKQAAKSKEELAQ 662
Query: 1835 D 1835
+
Sbjct: 663 E 663
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 163 (62.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 36/128 (28%), Positives = 68/128 (53%)
Query: 468 QHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
+H L GH +AV CV FD G +V+G D +K+W A G+ + TL G + + +
Sbjct: 369 RHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 527 DNRNILLAAGTVDKTIRIWNL---QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 583
++ ++ +G++D +IR+W+ + +++L GH + +G +++ G N L S +
Sbjct: 427 ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG-----MQLRG-NILVSCN 480
Query: 584 TDGCIGFW 591
D + W
Sbjct: 481 ADSHVRVW 488
Score = 144 (55.7 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
Y +GH V+ + G IV+G+ D +K+W DG LL TL+G + + +A+
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+L G+ D T+R+W++++ ++ L GH + V F
Sbjct: 350 --ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Score = 142 (55.0 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 508
SG R++ + S +L H + GH S V C+ G ++VTG+ D +++W G
Sbjct: 313 SGSTDRTVKVWSTVDGSLL-HTLQ-GHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESG 368
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+ LATL G + + D ++ +G D T++IWN T I L GH + + F
Sbjct: 369 RHLATLHGHHAAVRCVQFDGTTVV--SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 569 CPLEVNGFNYLASTSTDGCIGFWKY 593
+ + + S S D I W +
Sbjct: 427 ----ESERSIVCSGSLDTSIRVWDF 447
Score = 110 (43.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 489 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 548
+V+VTG+DD +K+W G+++ TL G +G + I + +G+ D+T+++W+
Sbjct: 267 DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 549 TLAPISVLVGHQGII 563
+ + L GH +
Sbjct: 327 DGSLLHTLQGHTSTV 341
Score = 89 (36.4 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
D + + ++F +KIW+A G ++ L GH N V+ L + ++ S D I +W
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES-ERSIVCSGSLDTSIRVW 445
Query: 793 D 793
D
Sbjct: 446 D 446
Score = 88 (36.0 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
++ + N + +++WD G V +L GH + + L+ F ++ ++ DG + +WDI
Sbjct: 475 ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWDI 531
Score = 68 (29.0 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
+++WD +G + L GH V ++ FD ++S G+D + IW+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQ---FDGTTVVSGGYDFTVKIWN 404
Score = 65 (27.9 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 30/155 (19%), Positives = 64/155 (41%)
Query: 618 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 677
+A + C F G + +G D V+++ + I + H+++V S+ +
Sbjct: 378 HAAVRCVQFD--GTTVVSGGYDFTVKIWN---AHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 678 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKKIKVTMVAWDASDRWV 736
SGS D + +W F R + C+ + TS + +++ +
Sbjct: 433 VCSGSLDTSIRVW-------DFTRPEGQECVALLQGHTSLTSGMQLRGN----------I 475
Query: 737 ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE 771
+ + N + +++WD G V +L GH + + L+
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQ 510
Score = 46 (21.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 278 DFNPAGETKTKAEKFLMSAMETERLTRLDQELMLLIIKYL 317
D NP E K L SA + + TRL QE + I+ L
Sbjct: 72 DLNPRVEHLIALFKDLSSAEQMDAFTRLLQESNMTNIRQL 111
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 163 (62.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 36/128 (28%), Positives = 68/128 (53%)
Query: 468 QHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
+H L GH +AV CV FD G +V+G D +K+W A G+ + TL G + + +
Sbjct: 369 RHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 527 DNRNILLAAGTVDKTIRIWNL---QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 583
++ ++ +G++D +IR+W+ + +++L GH + +G +++ G N L S +
Sbjct: 427 ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG-----MQLRG-NILVSCN 480
Query: 584 TDGCIGFW 591
D + W
Sbjct: 481 ADSHVRVW 488
Score = 144 (55.7 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
Y +GH V+ + G IV+G+ D +K+W DG LL TL+G + + +A+
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+L G+ D T+R+W++++ ++ L GH + V F
Sbjct: 350 --ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Score = 142 (55.0 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 508
SG R++ + S +L H + GH S V C+ G ++VTG+ D +++W G
Sbjct: 313 SGSTDRTVKVWSTVDGSLL-HTLQ-GHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESG 368
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+ LATL G + + D ++ +G D T++IWN T I L GH + + F
Sbjct: 369 RHLATLHGHHAAVRCVQFDGTTVV--SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 569 CPLEVNGFNYLASTSTDGCIGFWKY 593
+ + + S S D I W +
Sbjct: 427 ----ESERSIVCSGSLDTSIRVWDF 447
Score = 110 (43.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 489 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 548
+V+VTG+DD +K+W G+++ TL G +G + I + +G+ D+T+++W+
Sbjct: 267 DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 549 TLAPISVLVGHQGII 563
+ + L GH +
Sbjct: 327 DGSLLHTLQGHTSTV 341
Score = 89 (36.4 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
D + + ++F +KIW+A G ++ L GH N V+ L + ++ S D I +W
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES-ERSIVCSGSLDTSIRVW 445
Query: 793 D 793
D
Sbjct: 446 D 446
Score = 88 (36.0 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
++ + N + +++WD G V +L GH + + L+ F ++ ++ DG + +WDI
Sbjct: 475 ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWDI 531
Score = 68 (29.0 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
+++WD +G + L GH V ++ FD ++S G+D + IW+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQ---FDGTTVVSGGYDFTVKIWN 404
Score = 65 (27.9 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 30/155 (19%), Positives = 64/155 (41%)
Query: 618 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 677
+A + C F G + +G D V+++ + I + H+++V S+ +
Sbjct: 378 HAAVRCVQFD--GTTVVSGGYDFTVKIWN---AHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 678 FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKKIKVTMVAWDASDRWV 736
SGS D + +W F R + C+ + TS + +++ +
Sbjct: 433 VCSGSLDTSIRVW-------DFTRPEGQECVALLQGHTSLTSGMQLRGN----------I 475
Query: 737 ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLE 771
+ + N + +++WD G V +L GH + + L+
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQ 510
Score = 46 (21.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 278 DFNPAGETKTKAEKFLMSAMETERLTRLDQELMLLIIKYL 317
D NP E K L SA + + TRL QE + I+ L
Sbjct: 72 DLNPRVEHLIALFKDLSSAEQMDAFTRLLQESNMTNIRQL 111
>UNIPROTKB|B1Q2X3 [details] [associations]
symbol:N-TAF1 "TAF1 RNA polymerase II, TATA box binding
protein (TBP)-associated factor, neuron specific isoform"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0005669 EMBL:AL590762 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOGENOM:HOG000020066 HOVERGEN:HBG050223
UniGene:Hs.158560 HGNC:HGNC:11535 EMBL:AL590763 EMBL:AB300418
IPI:IPI00149098 SMR:B1Q2X3 STRING:B1Q2X3 Ensembl:ENST00000423759
Uniprot:B1Q2X3
Length = 1895
Score = 150 (57.9 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 1536 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1596 ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1635
Score = 150 (57.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 1536 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 185 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 218
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1596 ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1635
Score = 122 (48.0 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1421 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1480
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1481 NGPKHSLTQISQSML-DLCDEKLK 1503
Score = 79 (32.9 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 1376 EKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQ 1435
+ I+T +++M + + PF PV+ DL T+R Y+ S
Sbjct: 1533 DNIVT--QKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFL 1590
Query: 1436 FDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
DV + AN+ K+N P S K A+ I ++ + + E
Sbjct: 1591 DDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTE 1627
Score = 66 (28.3 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1401 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1460
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1461 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1504
Score = 55 (24.4 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 24/90 (26%), Positives = 32/90 (35%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKL 1806
DP PGP T A+P ++ ++ S D IP P K++
Sbjct: 1656 DPMTPGPYTPQAKPPDLYDTNTSLSMSRDASVFQDESNMSVLD---IPSAT----PEKQV 1708
Query: 1807 KVLYPKRRGQQSEDGSGDNASEMSELKQDP 1836
Q+ EDG GD A E Q P
Sbjct: 1709 T--------QEGEDGDGDLADEEEGTVQQP 1730
Score = 51 (23.0 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1448 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1504
Score = 44 (20.5 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD L L
Sbjct: 463 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEDLVYGRWEDNIIWDAQAMPRL----L 516
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 517 EPPVLTLDPNDENLILEI-PDEKEE 540
Score = 43 (20.2 bits), Expect = 5.4e-06, Sum P(5) = 5.4e-06
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 689 PQDLTGKDGDLILAEYSEENGPLMMQV 715
Score = 43 (20.2 bits), Expect = 5.4e-06, Sum P(5) = 5.4e-06
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S + N +D
Sbjct: 1117 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSAASGNNHRD 1168
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQE 308
V S EVLS S ++DF+ E E L + + +L+R +E
Sbjct: 1097 VLSSTEVLSTDTDSSSAEDSDFE-----EMGKNIENMLQNKKTSSQLSREREE 1144
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 566 TGVIKEEPQQNMSQPEVKDPWNLSND 591
Score = 38 (18.4 bits), Expect = 0.00046, Sum P(4) = 0.00046
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 1512 TAVTRAQ-REAMNQKKLKRPFNWKNE 1536
T V + + ++ M+Q ++K P+N N+
Sbjct: 566 TGVIKEEPQQNMSQPEVKDPWNLSND 591
>UNIPROTKB|E2RRR3 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00390000003017 EMBL:AAEX03012193
EMBL:AAEX03012194 EMBL:AAEX03012195 Ensembl:ENSCAFT00000014499
Uniprot:E2RRR3
Length = 1635
Score = 145 (56.1 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 1516 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 1575
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 1576 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 1616
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVY 608
Score = 145 (56.1 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 101 RAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDL 160
R ++ + ++++K FN E RE +C + F K D+PDY KI++ PMDL
Sbjct: 512 RKSKKNIRKQRMKILFNVVLEAREPGSGRRLC---DLFMVKPSKKDYPDYYKIILEPMDL 568
Query: 161 GTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIY 201
I +R D Y ++D+K +F N+R+YN+ + S++Y
Sbjct: 569 KIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE-EGSQVY 608
Score = 106 (42.4 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
SE F+K K+ +PDY I+ P+DL TI + ++ +Y+S KD+ + N++ YN+
Sbjct: 205 SELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNE 264
Score = 99 (39.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 1550 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 1608
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 1609 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 99 (39.9 bits), Expect = 1.6e-06, Sum P(5) = 1.6e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 135 SEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK-DVKRVFHNSRNYN 193
+EPF K +PDY + + P+ L IR +L+ YE+ +D ++ D+ +F N++ YN
Sbjct: 405 AEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYET-LDHLECDLNLMFENAKRYN 463
Query: 194 QNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
S IY +L + + + L R
Sbjct: 464 V-PNSAIYKRVLKLQQVMQAKKKELARR 490
Score = 88 (36.0 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 1462
DL T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 229 DLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 84 (34.6 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1517 AQREAMNQKKLKRPFNWKNECREVLETLWVCPD------SEPFRKPVDKLDHPDYDKIVI 1570
+++ ++ KK K + + EV E + D S F + + + PDY +
Sbjct: 642 SRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK 701
Query: 1571 APMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHL 1630
PMD+ IR + + Y+ V+D +F+N+ YN+ + S IY L + E
Sbjct: 702 KPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPE-SLIYKDALVLHKVLLETR 760
Query: 1631 RRLTVRWNSH 1640
R L +SH
Sbjct: 761 RDLEGDEDSH 770
Score = 82 (33.9 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L T+ R QN Y+ I + D+ LA NA+ +NEP S + K A I
Sbjct: 230 LKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
Score = 78 (32.5 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 136 EPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
E F + + + PDY ++V P+DL I+++L+ + Y+ D + +F+N++ Y
Sbjct: 70 ELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAY 126
Score = 68 (29.0 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1387 GLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAE 1446
G +AEPF + L +R + +N+ Y + + D+ + NA+
Sbjct: 401 GQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK 460
Query: 1447 KFNEPHSNIVKYARII 1462
++N P+S I Y R++
Sbjct: 461 RYNVPNSAI--YKRVL 474
Score = 65 (27.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L +R + +N+ Y + + D+ + NA+++N P+S I Y R++
Sbjct: 430 LQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI--YKRVL 474
Score = 61 (26.5 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIK--- 1471
D+ +R+ Y+ I S D + NA +NEP S I K A ++ +LL +
Sbjct: 705 DMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLE 764
Query: 1472 --EPNPV-DVPVVYHELLQN 1488
E + V +V ++ EL+ N
Sbjct: 765 GDEDSHVPNVTLLIQELIHN 784
Score = 54 (24.1 bits), Expect = 1.6e-06, Sum P(5) = 1.6e-06
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPN 1474
DL + +N Y D++ + NA +NE S + A I+ LL KE
Sbjct: 567 DLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELG 626
Query: 1475 PV 1476
P+
Sbjct: 627 PL 628
Score = 44 (20.5 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 344 DWEGATHSQTLAEVASSHPN 363
D EG +S +LAE+ + PN
Sbjct: 794 DDEGRCYSDSLAEIPAVDPN 813
Score = 43 (20.2 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L ++ + + Y + D + L NA+ + +P S K A + DL LR E
Sbjct: 94 LMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNE 150
Score = 43 (20.2 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+R +N YRR+ Q + + A + N S I + A + ++I E
Sbjct: 825 IRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDE 878
Score = 43 (20.2 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEV 904
PPH +PP + L G P PP V
Sbjct: 1465 PPHHLPPG-VPGLPGIP-PPGV 1484
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555
S +S D + + G K R+ NL T+ PI+V
Sbjct: 12 SSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAV 49
Score = 40 (19.1 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 951 RHYNDHGHVYIQTSHV 966
RHYN+ G +H+
Sbjct: 598 RHYNEEGSQVYNDAHI 613
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1239 LAVMKPNG--KLTNEFFNIKYHDMPDVIDFFVL 1269
L + KP K+ + KY D+ +++ FV+
Sbjct: 698 LTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVM 730
Score = 38 (18.4 bits), Expect = 9.9e-06, Sum P(5) = 9.9e-06
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 1200 ELSRLRSSPWGNL 1212
ELSRL + W NL
Sbjct: 1409 ELSRLVGTEWRNL 1421
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(5) = 1.6e-06
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 974 NGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHKIVVE 1012
+G+S ++ TS +G+A KN K+ +V+E
Sbjct: 495 DGDSMISS-ATSDAGSAKRKSKKNIRKQRMKILFNVVLE 532
Score = 37 (18.1 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 540 KTIRIWNLQTLAPISVLVGHQGIITGVNF--C-PLEV 573
K + + NL+ P++ ++G +++ +F C P E+
Sbjct: 1214 KEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEI 1250
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 197 (74.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 68/223 (30%), Positives = 105/223 (47%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG-KLLATLRGCSGEISDIAIDNRNIL 532
GH V F G I T ++D +LW G K L G S + I+I + L
Sbjct: 385 GHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSL 444
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
LA G+ D +RIW+L++ PI GH + V++ P NG+ LAS+S D + W
Sbjct: 445 LATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSP---NGYQ-LASSSEDNTVVIWD 500
Query: 593 YKLDIDISKTVFHEPVM----FNERIRPGNAHILCSSFSPGGL-FLATGSGDHHVRVYKM 647
+ + + H ++ F ++ N + ++ SPG + +LAT S D ++ +
Sbjct: 501 IRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNN--NNSSPGCVNYLATCSFDGKIKTWSP 558
Query: 648 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ SPL E HS KV SI ++S + +S S D T IW
Sbjct: 559 N-TWSPLATFE--GHSSKVTSIDLTNS--KILSTSFDKTWKIW 596
>UNIPROTKB|F1S033 [details] [associations]
symbol:BRD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006357 GO:GO:0003682
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 CTD:8019 KO:K11721
OMA:NNNKKPA EMBL:CU627992 RefSeq:XP_003484360.1
Ensembl:ENSSSCT00000006321 GeneID:100152283 KEGG:ssc:100152283
Uniprot:F1S033
Length = 726
Score = 141 (54.7 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 152
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPAKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 153 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 141 (54.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 1567
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPAKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 1568 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 119 (46.9 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 42/164 (25%), Positives = 71/164 (43%)
Query: 1327 SPWDLEPPKEGKE-ATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDAT----CEKIITG 1381
SP L PK+ K A G P++P + ++L P + R + C+ I+
Sbjct: 263 SPPPLSDPKQAKVVARRESGGRPIKPPK-KDLEDGEVPQHAGKKGRLSEHLRHCDSILRE 321
Query: 1382 LEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVR 1439
+ + A PF PVD + DL+T++ + +R Y D+R
Sbjct: 322 MLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDAQGFAADIR 381
Query: 1440 YLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVPVV 1481
+ +N K+N P +V AR + D+ +R K P+ PV+ P +
Sbjct: 382 LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPVEAPAL 425
Score = 108 (43.1 bits), Expect = 6.0e-10, Sum P(4) = 6.0e-10
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 1552 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L+ DY I+ PMDL T+++++ Y F D++ +F N YN
Sbjct: 333 PFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDAQGFAADIRLMFSNCYKYNP 392
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 393 PDH-EVVAMARKLQDVFEMRFAKM 415
Score = 41 (19.5 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 10/54 (18%), Positives = 18/54 (33%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
P++P + + P A +S S E+E + + EQ
Sbjct: 416 PDEPVEAPALPAPAAPVVSKGTESSRSSEESSSDSGSSDSEEERATRLAELQEQ 469
Score = 39 (18.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
ES+ S+E + +D+ E+ A +L L
Sbjct: 438 ESSRSSEESSSDSGSSDSEEERATRLAEL 466
Score = 39 (18.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 1780 EESASESQEDENSIP-ET--DTTEQPAKK-LKV-LYPKRRGQQSEDGSGDNASEMSELKQ 1834
E S +S DE I ET TT + ++ +K L K+R S G A EL Q
Sbjct: 603 EPSLRDSNPDEIEIDFETLKPTTLRELERYVKACLQKKQRKPLSTSGKKQAAKSKEELAQ 662
Query: 1835 D 1835
+
Sbjct: 663 E 663
Score = 39 (18.8 bits), Expect = 6.0e-10, Sum P(4) = 6.0e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQ 812
I+ ++LS K Y W F+ V+ +
Sbjct: 318 ILREMLSKKHAAYAWPFYKPVDAE 341
>RGD|1306678 [details] [associations]
symbol:Brdt "bromodomain, testis-specific" species:10116 "Rattus
norvegicus" [GO:0001207 "histone displacement" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007141
"male meiosis I" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0051039 "positive regulation of transcription
during meiosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 RGD:1306678
GO:GO:0005634 GO:GO:0030154 GO:GO:0008380 GO:GO:0006397
GO:GO:0007283 GO:GO:0006351 GO:GO:0006338 GO:GO:0043484
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
OMA:GVMKSSD OrthoDB:EOG4NVZJT GO:GO:0001207 IPI:IPI00363686
Ensembl:ENSRNOT00000002842 ArrayExpress:D4A7T3 Uniprot:D4A7T3
Length = 952
Score = 147 (56.8 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 47/133 (35%), Positives = 62/133 (46%)
Query: 105 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E +N KK R N R VL+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 17 EYINAKKTGRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLS 76
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
TI++ L YE + V D +F N YN+ I +M L + + L ++
Sbjct: 77 TIKKRLENRYYEKASECVGDFNTMFSNCYLYNK-PGDDIVVMAQALEKLFMQKLSQMPQE 135
Query: 222 WNSHKNKEN-KKD 233
KE KKD
Sbjct: 136 EQIVGGKERMKKD 148
Score = 147 (56.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/133 (35%), Positives = 62/133 (46%)
Query: 1520 EAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E +N KK R N R VL+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 17 EYINAKKTGRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLS 76
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVR 1636
TI++ L YE + V D +F N YN+ I +M L + + L ++
Sbjct: 77 TIKKRLENRYYEKASECVGDFNTMFSNCYLYNK-PGDDIVVMAQALEKLFMQKLSQMPQE 135
Query: 1637 WNSHKNKEN-KKD 1648
KE KKD
Sbjct: 136 EQIVGGKERMKKD 148
Score = 118 (46.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 1537 CREVLETLWV---CPDSEPFRKPVDKLD----HPDYDKIVIAPMDLGTIREELRGDNYES 1589
C E+L+ + P + PF PVD +D H YD IV PMDLGTI+ ++ Y+
Sbjct: 275 CSEILKEMLAKKHLPYAWPFYNPVD-VDALGLHNYYD-IVKNPMDLGTIKGKMDKQEYKD 332
Query: 1590 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
+F DV+ +F N YN ++ M L + E H ++
Sbjct: 333 ACEFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDVFEMHFAKI 375
Score = 118 (46.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 122 CREVLETLWV---CPDSEPFRKPVDKLD----HPDYDKIVIAPMDLGTIREELRGDNYES 174
C E+L+ + P + PF PVD +D H YD IV PMDLGTI+ ++ Y+
Sbjct: 275 CSEILKEMLAKKHLPYAWPFYNPVD-VDALGLHNYYD-IVKNPMDLGTIKGKMDKQEYKD 332
Query: 175 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
+F DV+ +F N YN ++ M L + E H ++
Sbjct: 333 ACEFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDVFEMHFAKI 375
Score = 95 (38.5 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C +I+ + L A PF PVD+ DL T++ + + Y+
Sbjct: 275 CSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYKDAC 334
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
DVR + N K+N P +V AR++ D+ + K P+ PV+
Sbjct: 335 EFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVE 381
Score = 91 (37.1 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 28/125 (22%), Positives = 56/125 (44%)
Query: 1355 QELLYHPRPDEWPQGDRDATCEKIITGLEEVM--GL---SVAEPFLVPVDISQXXXXXXX 1409
Q + +P P E+ + + L+ V+ L S + PF PVD ++
Sbjct: 7 QMAIVNPPPPEYINAKKTGRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYY 66
Query: 1410 XXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLL 1467
DL+T++ R +NR+Y + + D + +N +N+P +IV A+ + L +
Sbjct: 67 TIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFM 126
Query: 1468 RIIKE 1472
+ + +
Sbjct: 127 QKLSQ 131
Score = 77 (32.2 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 14/57 (24%), Positives = 32/57 (56%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L+T++ R +NR+Y + + D + +N +N+P +IV A+ + L ++ + +
Sbjct: 75 LSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQ 131
Score = 43 (20.2 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 1519 REAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDK 1567
+ A +KK+ R N K + +++ + + +KP+ KL+ D K
Sbjct: 455 KRAPKRKKVNRDENPKKKAKQMKQKEKAKSNQPKKKKPLLKLEEEDNAK 503
Score = 39 (18.8 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 1814 RGQQSEDGSGDNASEMSE 1831
R SE SGD +SE SE
Sbjct: 398 RESSSEASSGDCSSEDSE 415
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 1055 QARTRAEYSEHIQDQYEDP 1073
+ART+ + +H++ +DP
Sbjct: 841 KARTQEQIRKHLEHSAKDP 859
Score = 37 (18.1 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 17/85 (20%), Positives = 30/85 (35%)
Query: 1748 PEQPGPSTSYAEP-VASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKL 1806
P P P P +AS S S+S S + +D++ +
Sbjct: 625 PRPPLPPPPPPPPELASGSRLSDSSSSSSSSGSGSSSSSSSSSGSGSSSSDSSSSDSSDS 684
Query: 1807 KV-LYPKRRGQQSED-GSGDNASEM 1829
+ + PK G + D S +N ++
Sbjct: 685 EPEISPKFTGVKQNDLPSKENTKQI 709
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 194 (73.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 91/385 (23%), Positives = 161/385 (41%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKL 171
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G + I +W+ T + L GH ITG+++ PL N Y+AS+S DG + W
Sbjct: 172 ASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW 231
Query: 592 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 634
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Query: 635 TG--SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-------RFVSGSRDG 685
T S D+ +R + ++ + +++ ++ S +L R VSGS D
Sbjct: 292 TMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDF 351
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W S D P T+ T + + V + R ++ + +F+
Sbjct: 352 TLFLW----SPAE----DKK---PLTRMTGHQA----LINQVLFSPDSR-IVASASFDKS 395
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 448
Query: 806 HNIVEGQGEGALFDGKWSPDGTTCA 830
+ G + ++ WSPDG A
Sbjct: 449 AMDLPGHAD-EVYAVDWSPDGQRVA 472
Score = 153 (58.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + VLF ++ + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D T+++W+++ L GH + V++ P +G +AS D C+ W+
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 484
Score = 123 (48.4 bits), Expect = 0.00098, P = 0.00098
Identities = 82/357 (22%), Positives = 140/357 (39%)
Query: 469 HYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIAID 527
H+ GH V + + G + +G + I LW GK + TL G S I+ ++ +
Sbjct: 149 HFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWE 208
Query: 528 NRNI-----LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582
+ +A+ + D ++RIW+ +L GH +T C L G L S
Sbjct: 209 PLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVT----C-LRWGGDGLLYSA 263
Query: 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642
S D I W+ H+ V+ R G+ H + + L TG+ +
Sbjct: 264 SQDRTIKVWRA-----------HDGVLC--RTLQGHGHWVNTMALSTDYALRTGAFEPAE 310
Query: 643 RVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702
++ D + E++E + ++ R VSGS D T +W + R+
Sbjct: 311 A--SVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRM 368
Query: 703 D-----MNTCL--PHTKETSDET-NKKIK-------------------VTMVAWDASDRW 735
+N L P ++ + + +K IK V +AW A R
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+++ + + +K+WD L L GH +EV+ ++ P RV S G D + IW
Sbjct: 429 LVSGSS-DSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA-SGGKDKCLRIW 483
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 149 (57.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + VLF +I + + D IKLW R GK L +LRG + IA + LL
Sbjct: 383 GHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLL 442
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D T+++W+ +T L GH + ++ P +G +AS D C+ W+
Sbjct: 443 VSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSP---DG-QRVASGGKDKCLRIWR 497
Score = 136 (52.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 51/181 (28%), Positives = 79/181 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F G+ + +G+ D ++ W T +G + IA L
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKL 184
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G + I +W+ T I VL GH IT + + PL +N YLAS S DG I W
Sbjct: 185 ASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIW 244
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAH-ILCSSFSPGGLFLATGSGDHHVRVYK-MDG 649
D + + ++I G+ + C + GL L + S D ++V++ DG
Sbjct: 245 ----DTLMGRC---------DKILTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVWRSQDG 290
Query: 650 V 650
+
Sbjct: 291 I 291
Score = 111 (44.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
T + + V + R +I + +F+ IK+W+ G + L+GH + V+ + + DS
Sbjct: 382 TGHQALINQVLFSPDTR-IIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQI-AWSADS 439
Query: 778 RVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
R+L+S D + +WD +K+ + G + +F WSPDG A
Sbjct: 440 RLLVSGSSDSTLKVWDA-ETKKLAID-----LPGHAD-EVFATDWSPDGQRVA 485
Score = 102 (41.0 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 44/182 (24%), Positives = 78/182 (42%)
Query: 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 571
++L G + + +A LA+G+ D T+R W+L T P GH+ + + + P
Sbjct: 121 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSP- 179
Query: 572 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGG 630
+G LAS + I W I + + H + P HI +P
Sbjct: 180 --DG-KKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEP--LHI-----NPEC 229
Query: 631 LFLATGSGDHHVRVYKMDGVDSPLGILE--VEEHSDKVDSIQWSHSHLRFVSGSRDGTAL 688
+LA+ S D +R++ D+ +G + + H+ V ++W L + S S+D T
Sbjct: 230 RYLASASKDGSIRIW-----DTLMGRCDKILTGHTQSVTCVKWGGDGLLY-SSSQDRTIK 283
Query: 689 IW 690
+W
Sbjct: 284 VW 285
Score = 101 (40.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V +AW A R +++ + + +K+WDA L L GH +EVF + P RV S
Sbjct: 430 VYQIAWSADSRLLVSGSS-DSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVA-SG 487
Query: 784 GHDGLIIIW 792
G D + IW
Sbjct: 488 GKDKCLRIW 496
Score = 86 (35.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH +V CV + G ++ + + D IK+WR++DG L TL+G + ++ +A+ +L
Sbjct: 257 GHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVL 314
>UNIPROTKB|Q60544 [details] [associations]
symbol:TAF1 "Transcription initiation factor TFIID subunit
1" species:10036 "Mesocricetus auratus" [GO:0000080 "G1 phase of
mitotic cell cycle" evidence=IMP] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=ISS] [GO:0016573
"histone acetylation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 GO:GO:0005524 GO:GO:0003677 GO:GO:0004674
GO:GO:0045944 GO:GO:0006352 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0071339 InterPro:IPR018359
GO:GO:0000080 GO:GO:0004402 GO:GO:0005669 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOVERGEN:HBG050223 EMBL:D26114 PIR:I48155
HSSP:P21675 ProteinModelPortal:Q60544 SMR:Q60544 PRIDE:Q60544
Uniprot:Q60544
Length = 1865
Score = 153 (58.9 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 36/101 (35%), Positives = 58/101 (57%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++++PMDL TIR+ + Y+S F+ DV
Sbjct: 1510 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1569
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1570 ILANSVKYNGSESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1609
Score = 153 (58.9 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 36/101 (35%), Positives = 58/101 (57%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K++++PMDL TIR+ + Y+S F+ DV
Sbjct: 1510 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1569
Query: 185 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 218
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1570 ILANSVKYNGSESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1609
Score = 122 (48.0 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1395 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1454
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1455 NGPKHSLTQISQSML-DLCDEKLK 1477
Score = 66 (28.3 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1375 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1434
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1435 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1478
Score = 51 (23.0 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1422 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1478
Score = 49 (22.3 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+ Q+ EDG GD A E Q P
Sbjct: 1678 KQLTQEGEDGDGDLADEEEGTVQQP 1702
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD P L
Sbjct: 437 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEDLVYGRWEDNIIWD----AQAMPRIL 490
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 491 EPPVLTLDPNDENLILEI-PDEKEE 514
Score = 43 (20.2 bits), Expect = 9.4e-06, Sum P(5) = 9.4e-06
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 663 PQDLTGKDGDLILAEYSEENGPLMMQV 689
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S N +D
Sbjct: 1091 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSASAGNNHRD 1142
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(5) = 2.2e-05
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQE 308
V S EVLS S ++DF+ E E L + + +L+R +E
Sbjct: 1071 VLSSTEVLSTDTDSSSAEDSDFE-----EMGKNIENMLQNKKTSSQLSREREE 1118
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 540 TGVIKEEPQQNMSQPEVKDPWNLSND 565
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 173 (66.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 375 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 432
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 433 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 484
Query: 590 FWKYK 594
W K
Sbjct: 485 IWDIK 489
Score = 152 (58.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 419 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 475
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 476 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 528
Query: 591 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 630
W K I V E V++ RIR N ++C+ S G
Sbjct: 529 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 571
Score = 118 (46.6 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 298 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 355
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 356 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 389
Score = 109 (43.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 474 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 339 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 395
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 396 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 446
Score = 96 (38.9 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 384 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 437
Query: 784 GHDGLIIIWDI 794
D I +WD+
Sbjct: 438 SLDTSIRVWDV 448
Score = 83 (34.3 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 473 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 532
Query: 796 SSKQRGYKWFHNIV--EGQGEGAL 817
+ + + N+V E G G +
Sbjct: 533 TGE-----FIRNLVTLESGGSGGV 551
Score = 78 (32.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 409 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 459
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
H + +E +L+S D + IWDI
Sbjct: 460 HQSLTSGME---LKDNILVSGNADSTVKIWDI 488
Score = 65 (27.9 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 689
G+ + +GS D +RV+ V++ I + H ++ + L VSG+ D T I
Sbjct: 431 GIHVVSGSLDTSIRVWD---VETGNCIHTLTGHQSLTSGMELKDNIL--VSGNADSTVKI 485
Query: 690 WYYKCSQWRFIRLDMNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVITAINFNFQIKI 748
W K Q CL +T NK + VT + ++ + +VIT+ + + +K+
Sbjct: 486 WDIKTGQ----------CL----QTLQGPNKHQSAVTCLQFNKN--FVITSSD-DGTVKL 528
Query: 749 WDAFNGDLVQVL 760
WD G+ ++ L
Sbjct: 529 WDLKTGEFIRNL 540
Score = 37 (18.1 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 291 KFLMSAMETE--R--LTRLDQELMLLIIKYLEKGPCHEAAK 327
K +M +E + R ++ L +EL L ++ +LE +AA+
Sbjct: 146 KHMMQVIEPQFQRDFISLLPKELALYVLSFLEPRDLLQAAQ 186
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 189 (71.6 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 35 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 94
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 95 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 150
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 151 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 198
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 199 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 258
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 259 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 311
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 312 NAHEHFVTSLDFH 324
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 173 (66.0 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 417 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 474
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 475 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 526
Query: 590 FWKYK 594
W K
Sbjct: 527 IWDIK 531
Score = 152 (58.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 461 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 517
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 518 S-GNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 570
Query: 591 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 630
W K I V E V++ RIR N ++C+ S G
Sbjct: 571 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 613
Score = 118 (46.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 340 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 397
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 398 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Score = 109 (43.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 474 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 381 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 437
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 438 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 488
Score = 96 (38.9 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 426 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 479
Query: 784 GHDGLIIIWDI 794
D I +WD+
Sbjct: 480 SLDTSIRVWDV 490
Score = 84 (34.6 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + N + +KIWD G +Q L+G + + F+ ++++ DG + +WD+
Sbjct: 515 ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 574
Query: 796 SSKQRGYKWFHNIV--EGQGEGAL 817
+ + + N+V E G G +
Sbjct: 575 TGE-----FIRNLVTLESGGSGGV 593
Score = 78 (32.5 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 451 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 501
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
H + +E +L+S D + IWDI
Sbjct: 502 HQSLTSGME---LKDNILVSGNADSTVKIWDI 530
Score = 37 (18.1 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 291 KFLMSAMETE--R--LTRLDQELMLLIIKYLEKGPCHEAAK 327
K +M +E + R ++ L +EL L ++ +LE +AA+
Sbjct: 188 KHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQ 228
>SGD|S000002228 [details] [associations]
symbol:BDF2 "Protein involved in transcription initiation"
species:4932 "Saccharomyces cerevisiae" [GO:0001047 "core promoter
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0031452 "negative regulation of heterochromatin assembly"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0001094
"TFIID-class transcription factor binding" evidence=IPI]
[GO:0042393 "histone binding" evidence=IDA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0030435 "sporulation
resulting in formation of a cellular spore" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 SGD:S000002228 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006281 EMBL:BK006938 GO:GO:0006351
GO:GO:0030435 GO:GO:0001047 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
KO:K11684 OrthoDB:EOG44TSHM PROSITE:PS51525
GeneTree:ENSGT00700000104285 HOGENOM:HOG000248774 GO:GO:0031452
EMBL:Z74119 PIR:S67605 RefSeq:NP_010213.1 ProteinModelPortal:Q07442
SMR:Q07442 DIP:DIP-1337N IntAct:Q07442 MINT:MINT-410894
STRING:Q07442 PaxDb:Q07442 EnsemblFungi:YDL070W GeneID:851488
KEGG:sce:YDL070W CYGD:YDL070w NextBio:968816 Genevestigator:Q07442
GermOnline:YDL070W Uniprot:Q07442
Length = 638
Score = 126 (49.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 1525 KKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIAPMDLGTIR 1579
K L++ F C ++L+ L +S+ PF +PVD L+ P+Y +V PMDLGTI
Sbjct: 317 KTLQKKFR---TCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTIS 373
Query: 1580 EELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEH 1629
L Y++ FV D+ VF+N +N + ++++ M +L E H
Sbjct: 374 NNLMNWKYKTIDQFVDDLNLVFYNCFQFNP-EGNEVHSMGKKLKELFNFH 422
Score = 126 (49.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 110 KKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIAPMDLGTIR 164
K L++ F C ++L+ L +S+ PF +PVD L+ P+Y +V PMDLGTI
Sbjct: 317 KTLQKKFR---TCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTIS 373
Query: 165 EELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEH 214
L Y++ FV D+ VF+N +N + ++++ M +L E H
Sbjct: 374 NNLMNWKYKTIDQFVDDLNLVFYNCFQFNP-EGNEVHSMGKKLKELFNFH 422
Score = 123 (48.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 134 DSEPFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191
D+ PF KPVD L+ P Y V PMDL I +L+G+ Y S D K + N N
Sbjct: 154 DARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLN 213
Query: 192 YNQNKRSKIYIMTTRLSEFAEEHLRRLTVR 221
+N S I M R+ ++ E+ L + R
Sbjct: 214 FN-GPESSISSMAKRIQKYFEKKLSAMPPR 242
Score = 76 (31.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 1378 IITGLEEVMGLSVAEPFLVPVD-IS-QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQ 1435
+++ ++ L A PFL PVD I+ DL+ + + Q Y +
Sbjct: 142 LLSSIKATKRLKDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVT 201
Query: 1436 FDVRYLAANAEKFNEPHSNIVKYARII 1462
D + + N FN P S+I A+ I
Sbjct: 202 SDFKTMVDNCLNFNGPESSISSMAKRI 228
Score = 69 (29.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/125 (24%), Positives = 50/125 (40%)
Query: 1335 KEGKEATEPGGSL-PVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAEP 1393
+EG P ++ P + +++ ++ + +P + TC KI+ L + P
Sbjct: 285 REGVSGGRPKRTIHPPKSKDLFDIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFP 344
Query: 1394 FLVPVD-IS-QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEP 1451
FL PVD I+ DL T+ N Y+ I D+ + N +FN P
Sbjct: 345 FLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFN-P 403
Query: 1452 HSNIV 1456
N V
Sbjct: 404 EGNEV 408
Score = 55 (24.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARII 47
L+ + + Q Y + D + + N FN P S+I A+ I
Sbjct: 182 LSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGPESSISSMAKRI 228
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 193 (73.0 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 92/354 (25%), Positives = 158/354 (44%)
Query: 474 GHLSAVFCVLF-DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S + C F +VTGA D ++W + TL+G + ++ +
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 533 LAAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEV--NGFN-YLASTSTDGCI 588
+A G++D TIR+W+ ++ + L GH IT +++ P+ + G LAS+S DG I
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
W +S+ + M N+ + C + GL L +GS D VRV+ ++
Sbjct: 261 KIWD-----TVSRVCQY--TMSGHT----NS-VSCVKWGGQGL-LYSGSHDRTVRVWDIN 307
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSH-LRFVS----GSRDGT-------ALIWYYK-C- 694
+ IL+ H+ V+ + S + LR + G + T AL Y K C
Sbjct: 308 SQGRCINILK--SHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICK 365
Query: 695 ----SQWRFIRL-DMNTC-----LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 744
S+ + D T L TK + T + V VA+ R++++A +F+
Sbjct: 366 KNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSA-SFDN 424
Query: 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798
IK+WD +G + +GH V+ + + D R+L+S D + +WD+ + K
Sbjct: 425 SIKLWDGRDGKFISTFRGHVASVYQV-AWSSDCRLLVSCSKDTTLKVWDVRTRK 477
Score = 136 (52.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V V F G IV+ + D IKLW RDGK ++T RG + +A + LL
Sbjct: 400 GHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLL 459
Query: 534 AAGTVDKTIRIWNLQTLAPISV-LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ + D T+++W+++T +SV L GH+ + V++ V+G + S D + W
Sbjct: 460 VSCSKDTTLKVWDVRT-RKLSVDLPGHKDEVYTVDW---SVDG-KRVCSGGKDKMVRLWT 514
Query: 593 Y 593
+
Sbjct: 515 H 515
Score = 134 (52.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 78/340 (22%), Positives = 138/340 (40%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA-TLRGCSGEISDIAIDNRNIL 532
GH + V CV + GEVI TG+ D I+LW + G+ L LRG S I+ ++ + +++
Sbjct: 184 GHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLV 243
Query: 533 -------LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
LA+ + D TI+IW+ + + GH ++ V + G L S S D
Sbjct: 244 KPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW-----GGQGLLYSGSHD 298
Query: 586 GCIGFWKYKLD---IDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642
+ W I+I K+ H N + + +F G +T
Sbjct: 299 RTVRVWDINSQGRCINILKSHAH---WVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKK 355
Query: 643 RVYKMDGVDSPLGILE--VEEHSDKVDSIQWSH-SHLRFVSGSRDGTALIWYYKCS-QWR 698
+ + + G E + SD W+ + ++ L+ + S R
Sbjct: 356 ALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGR 415
Query: 699 FI---RLDMNTCLPHTKE---TSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752
+I D + L ++ S V VAW +SD ++ + + + +K+WD
Sbjct: 416 YIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAW-SSDCRLLVSCSKDTTLKVWDVR 474
Query: 753 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
L L GH +EV+ ++ D + + S G D ++ +W
Sbjct: 475 TRKLSVDLPGHKDEVYTVD-WSVDGKRVCSGGKDKMVRLW 513
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 176 (67.0 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V C+ F+ ++ TG+ D IK+W G+ L TLRG I + D+ ++
Sbjct: 347 GHTNGVMCLQFED--NILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLI- 403
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G++D+TI++WN +T IS GH+G + G++F + LAS S D + W +
Sbjct: 404 -SGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF------DASILASGSVDKTVKIWNF 456
Query: 594 K 594
+
Sbjct: 457 E 457
Score = 120 (47.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 508
SG + R++ + + + Y GH V + FD ++ +G+ D +K+W D
Sbjct: 404 SGSMDRTIKVWNWRTGECISTYT--GHRGGVIGLHFD--ASILASGSVDKTVKIWNFED- 458
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
K +LRG + ++ + +D + + + + D T+R+W+L T I GH G + V
Sbjct: 459 KSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVP 518
Query: 569 CPLE 572
P E
Sbjct: 519 LPRE 522
Score = 72 (30.4 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 731 ASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLII 790
A R+++T+ + I++W+ G ++ GH V+ L + D+ ++S D +I
Sbjct: 577 APPRYMVTSA-LDSTIRLWETTTGRCLRTFFGHLEGVWALGA---DTLRIVSGAEDRMIK 632
Query: 791 IWDILSSK 798
IWD + K
Sbjct: 633 IWDPRTGK 640
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEV 767
IKIWD G + GH+ V
Sbjct: 631 IKIWDPRTGKCERTFTGHSGPV 652
Score = 39 (18.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 676 LRFVSGSRDGTALIW 690
LR VSG+ D IW
Sbjct: 620 LRIVSGAEDRMIKIW 634
Score = 38 (18.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1353 EIQELLYHPRPDEWPQGDRDATCE 1376
++Q+++ P P E+ + DA CE
Sbjct: 512 QVQQVV--PLPREFEFEEHDAECE 533
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 634 ATGSGDHHVRVY 645
ATGS D VR+Y
Sbjct: 663 ATGSEDCEVRMY 674
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 192 (72.6 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 89/385 (23%), Positives = 159/385 (41%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 172
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G + I +W+ T + L GH IT +++ PL N Y+AS+S DG + W
Sbjct: 173 ASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW 232
Query: 592 KY---KLDIDI-----SKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 634
+ + + S T + ++++ +R I+ AH +LC + G ++
Sbjct: 233 DTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 292
Query: 635 TG--SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-------RFVSGSRDG 685
T S D+ +R + ++ + ++ ++ S +L R VSGS D
Sbjct: 293 TMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDF 352
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W + K + T + + V + R VI + +F+
Sbjct: 353 TLFLW---------------SPAEDKKPLARMTGHQALINQVVFSPDSR-VIASASFDKS 396
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 397 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQK------L 449
Query: 806 HNIVEGQGEGALFDGKWSPDGTTCA 830
+ G + ++ WSPDG A
Sbjct: 450 STDLPGHAD-EVYAVDWSPDGQRVA 473
Score = 153 (58.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + V+F VI + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 371 GHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 430
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 431 VSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 485
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 156 (60.0 bits), Expect = 3.4e-11, Sum P(4) = 3.4e-11
Identities = 37/137 (27%), Positives = 66/137 (48%)
Query: 432 NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVI 491
N KV T V+R R + S + + GH V C+ F++ + +
Sbjct: 339 NHQKVVPTSVVVRKRPWKSVYSERFKLEKNWRKGTHTIKTFTGHSDGVTCLQFNR--KYL 396
Query: 492 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 551
+TG+ D IK+W+ G+ + TL G + + + DN+ ++ +G +D TI++WN T
Sbjct: 397 MTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLI--SGGLDSTIKVWNYHTGQ 454
Query: 552 PISVLVGHQGIITGVNF 568
I+ GH+ + V+F
Sbjct: 455 CIATYRGHEDAVVSVDF 471
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V ++FD + +++G D IK+W G+ +AT RG + + N++I+
Sbjct: 421 GHTKGVRALVFDN--QKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIV- 477
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G+ D T+R+W++ + + L GH VN + + N + S S D I W
Sbjct: 478 -SGSADHTVRVWHVDSRTCYT-LRGHTD---WVNHVKIH-SASNTIFSASDDTTIRMW 529
Score = 86 (35.3 bits), Expect = 3.4e-11, Sum P(4) = 3.4e-11
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798
IK+WD G ++ GH V+ + + F R++ S HD LI +WD+ + K
Sbjct: 650 IKLWDVATGKCIRTQFGHIEGVWSIAADTF--RII-SGAHDRLIKVWDLQNGK 699
Score = 62 (26.9 bits), Expect = 7.6e-08, Sum P(4) = 7.6e-08
Identities = 29/103 (28%), Positives = 44/103 (42%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
H D V S+ +++ + VSGS D T +W+ +D TC T + K
Sbjct: 462 HEDAVVSVDFTNKSI--VSGSADHTVRVWH----------VDSRTCYTLRGHTDWVNHVK 509
Query: 722 I-KVTMVAWDASDRWVITA--INFNFQIKIWDAF--NGDLVQV 759
I + + ASD I +N N IK++ NG + QV
Sbjct: 510 IHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQV 552
Score = 58 (25.5 bits), Expect = 3.4e-11, Sum P(4) = 3.4e-11
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 633 LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ +GS DH VRV+ VDS + H+D V+ ++ + S S D T +W
Sbjct: 476 IVSGSADHTVRVWH---VDSRT-CYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMW 529
Score = 48 (22.0 bits), Expect = 7.6e-08, Sum P(4) = 7.6e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 1780 EESASESQEDENSIPETDTTEQPA 1803
+ES S+S+ ++NS T TT A
Sbjct: 567 DESESDSENNQNSTTTTTTTSAAA 590
Score = 42 (19.8 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 729 WD-ASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN 765
W A+D + I + + IK+WD NG + +++
Sbjct: 672 WSIAADTFRIISGAHDRLIKVWDLQNGKCLHTFSNNSS 709
Score = 41 (19.5 bits), Expect = 3.4e-11, Sum P(4) = 3.4e-11
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 295 SAMETERLTRLDQELMLLIIKYLE-KGPCHEAAKV 328
S ++ + ++ L QE+ L I+ YL+ + C+ AA+V
Sbjct: 210 SLIKIDFISTLPQEISLKILCYLDCRSLCN-AAQV 243
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 173 (66.0 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 415 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 472
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 473 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 524
Query: 590 FWKYK 594
W K
Sbjct: 525 IWDIK 529
Score = 152 (58.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 459 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 515
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 516 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 568
Query: 591 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 630
W K I V E V++ RIR N ++C+ S G
Sbjct: 569 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 611
Score = 118 (46.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 338 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 395
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 396 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 429
Score = 109 (43.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 474 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 379 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 435
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 436 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 486
Score = 96 (38.9 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 424 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 477
Query: 784 GHDGLIIIWDI 794
D I +WD+
Sbjct: 478 SLDTSIRVWDV 488
Score = 83 (34.3 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 513 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 572
Query: 796 SSKQRGYKWFHNIV--EGQGEGAL 817
+ + + N+V E G G +
Sbjct: 573 TGE-----FIRNLVTLESGGSGGV 591
Score = 78 (32.5 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 449 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 499
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
H + +E +L+S D + IWDI
Sbjct: 500 HQSLTSGME---LKDNILVSGNADSTVKIWDI 528
Score = 37 (18.1 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 291 KFLMSAMETE--R--LTRLDQELMLLIIKYLEKGPCHEAAK 327
K +M +E + R ++ L +EL L ++ +LE +AA+
Sbjct: 186 KHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQ 226
>UNIPROTKB|Q4R8Y1 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9541 "Macaca fascicularis" [GO:0001207 "histone
displacement" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0007140 "male
meiosis" evidence=ISS] [GO:0007141 "male meiosis I" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0051039 "positive regulation of transcription
during meiosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0030154 GO:GO:0008380 GO:GO:0006397 GO:GO:0007283
GO:GO:0006351 GO:GO:0006338 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359
GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141 HOVERGEN:HBG004896
GO:GO:0001207 EMBL:AB168316 EMBL:CM001276 ProteinModelPortal:Q4R8Y1
SMR:Q4R8Y1 PRIDE:Q4R8Y1 Uniprot:Q4R8Y1
Length = 947
Score = 134 (52.2 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E +N KK R N ++V L+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 18 EYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLN 77
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L Y + ++D +F N YN+ I +M L + + L ++
Sbjct: 78 TIKKRLENKYYVKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKLFVQKLSQM 133
Score = 134 (52.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E +N KK R N ++V L+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 18 EYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLN 77
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L Y + ++D +F N YN+ I +M L + + L ++
Sbjct: 78 TIKKRLENKYYVKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKLFVQKLSQM 133
Score = 121 (47.7 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 37/130 (28%), Positives = 55/130 (42%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDY 1565
P V ++ N K + C E+L+ + PF PVD L +Y
Sbjct: 250 PKNVLPDSQQQYNVVKSVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNY 309
Query: 1566 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 1625
IV PMDLGTI+E++ Y+ F DV+ +F N YN ++ M L +
Sbjct: 310 YDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDV 368
Query: 1626 AEEHLRRLTV 1635
E H ++ V
Sbjct: 369 FETHFSKIPV 378
Score = 121 (47.7 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 37/130 (28%), Positives = 55/130 (42%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDY 150
P V ++ N K + C E+L+ + PF PVD L +Y
Sbjct: 250 PKNVLPDSQQQYNVVKSVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNY 309
Query: 151 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 210
IV PMDLGTI+E++ Y+ F DV+ +F N YN ++ M L +
Sbjct: 310 YDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDV 368
Query: 211 AEEHLRRLTV 220
E H ++ V
Sbjct: 369 FETHFSKIPV 378
Score = 102 (41.0 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C +I+ + S A PF PVD++ DL T++ + N+ Y+
Sbjct: 276 CSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYKDAY 335
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEP-NPVD-VPVVY 1482
DVR + N K+N P +V AR++ D+ K P PV+ +P+ Y
Sbjct: 336 KFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCY 388
Score = 80 (33.2 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 25/108 (23%), Positives = 52/108 (48%)
Query: 1376 EKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITS 1433
+K++ L+++ S + PF PVD + DL T++ R +N++Y + +
Sbjct: 36 QKVV--LKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASE 93
Query: 1434 AQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVV 1481
D + +N +N+P +IV A+ + L ++ + + P + VV
Sbjct: 94 CIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQM-PQEEQVV 140
Score = 69 (29.3 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 16/66 (24%), Positives = 35/66 (53%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R +N++Y + + D + +N +N+P +IV A+ + L ++ + + P
Sbjct: 76 LNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQM-P 134
Query: 61 VDVPVV 66
+ VV
Sbjct: 135 QEEQVV 140
Score = 52 (23.4 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1780 EESASESQEDENSIPETDTTEQPAK-KLKVLYPKRR-----GQQSEDGSGDNASEMSELK 1833
+E E + N P + K K K PK+R GQ+SED DNA M+ +
Sbjct: 457 KEKKKEKVNNSNENPRKMCEQMRLKEKSKRNQPKKRKQQYIGQKSEDE--DNAKPMNYDE 514
Query: 1834 QDPLSLH 1840
+ LSL+
Sbjct: 515 KRQLSLN 521
Score = 50 (22.7 bits), Expect = 6.1e-11, Sum P(4) = 6.1e-11
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 1806 LKVLYPKRRGQQSEDG------SGDNASEMSELK-QDPLSLHXXXXXXXXXXXMGKRKRT 1858
L++L P +Q +G SGDNA+ M E + Q P+ +GK +
Sbjct: 756 LQILPPSGDSEQLSNGITVMHPSGDNATTMLESECQAPVQKDIKIKNADSWKSLGKSVKP 815
Query: 1859 TRLVKSN 1865
+ ++KS+
Sbjct: 816 SGVMKSS 822
Score = 40 (19.1 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 1126 PKRVRRHTKVKPIQVSLPKQLIPE 1149
P + + PI+ ++PK ++P+
Sbjct: 233 PTFTEKSVTLPPIKENMPKNVLPD 256
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 177 (67.4 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 45/128 (35%), Positives = 63/128 (49%)
Query: 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524
N RQ ++ GHL V V F +I +G D +K+W A GKL+ T G IS I
Sbjct: 165 NYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTI 224
Query: 525 AIDNRNILLAAGTVDKTIRIWNLQT-LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 583
+ +A+G+ DKTIR+WN+ T A + +GH + + F P G N L S S
Sbjct: 225 SWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSP---KG-NMLVSGS 280
Query: 584 TDGCIGFW 591
D + W
Sbjct: 281 YDEAVFLW 288
Score = 158 (60.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 56/221 (25%), Positives = 94/221 (42%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH + V+ + F G ++V+G+ D + LW R +++ +L S +S I + L
Sbjct: 258 IGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTL 317
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+A+ D +RIW+ T + LV ++ V F P NG Y+ + + D C+ W
Sbjct: 318 IASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSP---NG-KYVLAWTLDDCVRLW 373
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651
Y + H ++ G +PG F +GS D + + D V
Sbjct: 374 DYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCW--DVVT 431
Query: 652 SPLGILEVEEHSDKVDSIQW-SHSHLRF-VSGSRDGTALIW 690
+ + +E H V + S RF VS DGT +W
Sbjct: 432 KKV-LQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVW 471
Score = 74 (31.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 35/148 (23%), Positives = 60/148 (40%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HSD V I S + DG IW Q CL + E N
Sbjct: 302 HSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQ----------CL---RTLVHEDNPP 348
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVL--------ESH 773
V+ V + + ++V+ A + +++WD G ++ +GH+N+ + L +S
Sbjct: 349 --VSSVKFSPNGKYVL-AWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSI 405
Query: 774 PFDS---RVLLSAGHDGLIIIWDILSSK 798
P + +S DG I+ WD+++ K
Sbjct: 406 PGRTPGYAFAVSGSEDGAILCWDVVTKK 433
Score = 60 (26.2 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLES-HPFDSRVLLSAGHDGLIIIWD 793
I WD ++Q ++ H V +++ + R ++S G DG + +W+
Sbjct: 424 ILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 38 (18.4 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 689
G +A+ + D VR++ L L V E + V S+++S + ++ + D +
Sbjct: 315 GTLIASCATDGLVRIWDTS-TGQCLRTL-VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRL 372
Query: 690 WYY 692
W Y
Sbjct: 373 WDY 375
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 1349 VEPEEIQELLYHPRPDEWPQGDRD 1372
V PE E P P + P D+D
Sbjct: 474 VGPEREPEPEPEPEPGQCPDQDQD 497
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>RGD|1308925 [details] [associations]
symbol:Brd3 "bromodomain containing 3" species:10116 "Rattus
norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 RGD:1308925 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 IPI:IPI01007604
Ensembl:ENSRNOT00000067299 UCSC:RGD:1308925 ArrayExpress:E9PTC5
Uniprot:E9PTC5
Length = 742
Score = 142 (55.0 bits), Expect = 5.4e-11, Sum P(4) = 5.4e-11
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 152
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 153 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 142 (55.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 1567
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 16 PGPVNPPPPEVSNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 75
Query: 1568 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 76 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 131
Score = 121 (47.7 bits), Expect = 5.4e-11, Sum P(4) = 5.4e-11
Identities = 41/164 (25%), Positives = 73/164 (44%)
Query: 1327 SPWDLEPPKEGKE-ATEPGGSLPVEP--EEIQ--ELLYHPRPDEWPQGDRDATCEKIITG 1381
SP L PK+ K A G P++P ++++ E+ H + + C+ I+
Sbjct: 263 SPPPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGK-KGKLSEHLRHCDSILRE 321
Query: 1382 LEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVR 1439
+ + A PF PVD + DL+T++ + +R Y D+R
Sbjct: 322 MLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIR 381
Query: 1440 YLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVPVV 1481
+ +N K+N P +V AR + D+ +R K P+ P++VP +
Sbjct: 382 LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPMEVPAL 425
Score = 107 (42.7 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 1552 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L+ DY I+ PMDL T++ ++ Y F D++ +F N YN
Sbjct: 333 PFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNP 392
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 393 PDH-EVVAMARKLQDVFEMRFAKM 415
Score = 39 (18.8 bits), Expect = 5.4e-11, Sum P(4) = 5.4e-11
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
ES+ S+E + +D+ E+ A +L L
Sbjct: 438 ESSRSSEESSSDSGSSDSEEERATRLAEL 466
Score = 39 (18.8 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQ 812
I+ ++LS K Y W F+ V+ +
Sbjct: 318 ILREMLSKKHAAYAWPFYKPVDAE 341
Score = 38 (18.4 bits), Expect = 5.4e-11, Sum P(4) = 5.4e-11
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 917
PP PPP + P P V + + AD T
Sbjct: 215 PPAAPPPPATPIVPVVPPTPPVVKKKGVKRKADTT 249
Score = 38 (18.4 bits), Expect = 6.8e-11, Sum P(4) = 6.8e-11
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 1780 EESASESQEDENSIP-ET--DTTEQPAKKL--KVLYPKRRGQQSEDGSGDNASEMSELKQ 1834
E S +S DE I ET TT + ++ L K+R S G A EL Q
Sbjct: 620 EPSLRDSNPDEIEIDFETLKPTTLRELERYVKSCLQKKQRKPLSTSGKKQAAKSKEELAQ 679
Query: 1835 D 1835
+
Sbjct: 680 E 680
Score = 37 (18.1 bits), Expect = 8.5e-11, Sum P(4) = 8.5e-11
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
P++P + P A +S S E+E + + EQ
Sbjct: 416 PDEPMEVPALPAPTAPIVSKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQ 469
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 188 (71.2 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 75/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DISTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDFKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 173 (66.0 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 495 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 552
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 553 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 604
Query: 590 FWKYK 594
W K
Sbjct: 605 IWDIK 609
Score = 152 (58.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 539 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 595
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 596 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 648
Query: 591 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 630
W K I V E V++ RIR N ++C+ S G
Sbjct: 649 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 691
Score = 118 (46.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 418 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 475
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 476 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 509
Score = 109 (43.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 474 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 459 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 515
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 516 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 566
Score = 96 (38.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 504 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 557
Query: 784 GHDGLIIIWDI 794
D I +WD+
Sbjct: 558 SLDTSIRVWDV 568
Score = 83 (34.3 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 593 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 652
Query: 796 SSKQRGYKWFHNIV--EGQGEGAL 817
+ + + N+V E G G +
Sbjct: 653 TGE-----FIRNLVTLESGGSGGV 671
Score = 78 (32.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 529 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 579
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
H + +E +L+S D + IWDI
Sbjct: 580 HQSLTSGME---LKDNILVSGNADSTVKIWDI 608
Score = 37 (18.1 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 291 KFLMSAMETE--R--LTRLDQELMLLIIKYLEKGPCHEAAK 327
K +M +E + R ++ L +EL L ++ +LE +AA+
Sbjct: 266 KHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQ 306
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 173 (66.0 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 39/125 (31%), Positives = 70/125 (56%)
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
+V +GH++AV CV +D G +V+GA D ++K+W L TL+G + + + D
Sbjct: 500 HVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 557
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+++ +G++D +IR+W+++T I L GHQ + +G +E+ N L S + D +
Sbjct: 558 HVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----MELKD-NILVSGNADSTVK 609
Query: 590 FWKYK 594
W K
Sbjct: 610 IWDIK 614
Score = 152 (58.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + NIL+
Sbjct: 544 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILV 600
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVG---HQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
+ G D T++IW+++T + L G HQ +T C L+ N N++ ++S DG +
Sbjct: 601 S-GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT----C-LQFNK-NFVITSSDDGTVKL 653
Query: 591 WKYKLDIDISKTVFHEP-----VMFNERIRPGNAHILCSSFSPGG 630
W K I V E V++ RIR N ++C+ S G
Sbjct: 654 WDLKTGEFIRNLVTLESGGSGGVVW--RIRASNTKLVCAVGSRNG 696
Score = 118 (46.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ +I++G+ D +K+W A G+ + TL G + + + + + ++
Sbjct: 423 VGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 480
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
+G+ D T+R+W+++T + VL+GH + V +
Sbjct: 481 --SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 514
Score = 109 (43.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 474 GHLSAVFCV-LFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V C+ L +K +V+G+ D +++W G+ L L G + + D R ++
Sbjct: 464 GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV 520
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G D +++W+ +T + L GH + + F +G ++ S S D I W
Sbjct: 521 --SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-----DGI-HVVSGSLDTSIRVW 571
Score = 96 (38.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V V +D R V++ ++F +K+WD + L+GHTN V+ L+ FD ++S
Sbjct: 509 VRCVQYDG--RRVVSGA-YDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSG 562
Query: 784 GHDGLIIIWDI 794
D I +WD+
Sbjct: 563 SLDTSIRVWDV 573
Score = 83 (34.3 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + N + +KIWD G +Q L+G + F+ ++++ DG + +WD+
Sbjct: 598 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 657
Query: 796 SSKQRGYKWFHNIV--EGQGEGAL 817
+ + + N+V E G G +
Sbjct: 658 TGE-----FIRNLVTLESGGSGGV 676
Score = 78 (32.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 703 DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
+ TCL HT + TN+ V + +D V++ + + I++WD G+ + L G
Sbjct: 534 ETETCL-HTLQ--GHTNR---VYSLQFDGIH--VVSG-SLDTSIRVWDVETGNCIHTLTG 584
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
H + +E +L+S D + IWDI
Sbjct: 585 HQSLTSGME---LKDNILVSGNADSTVKIWDI 613
Score = 37 (18.1 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 291 KFLMSAMETE--R--LTRLDQELMLLIIKYLEKGPCHEAAK 327
K +M +E + R ++ L +EL L ++ +LE +AA+
Sbjct: 271 KHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQ 311
>UNIPROTKB|B5FZ19 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:59729 "Taeniopygia guttata" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 OrthoDB:EOG4HX519 EMBL:DQ214273 EMBL:DQ214274
EMBL:DQ214277 EMBL:DQ214278 EMBL:DQ214279 EMBL:DQ214280
RefSeq:NP_001157823.1 UniGene:Tgu.2619 ProteinModelPortal:B5FZ19
STRING:B5FZ19 PRIDE:B5FZ19 GeneID:100190672 KEGG:tgu:100190672
Uniprot:B5FZ19
Length = 325
Score = 184 (69.8 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 72/324 (22%), Positives = 147/324 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D R++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVDADWDTRHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T ++++ + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALVKTSSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G F+ G + + +
Sbjct: 120 CFVSFFDLRDPSQIENNEPYM---KIPCSDSKITSAVWGPLGEFIIAGHENGELNQFSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ + ++EH+ +++ IQ S F++ S+D TA + + C+ + ++ T
Sbjct: 177 SGEQ---LSNIKEHTKQINDIQTSRDMTMFITASKDNTAKL--FDCTSLKHLKT-FRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAALSPIFDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|Q58F21 [details] [associations]
symbol:BRDT "Bromodomain testis-specific protein"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001207 "histone
displacement" evidence=ISS] [GO:0007140 "male meiosis"
evidence=ISS] [GO:0007141 "male meiosis I" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0043484 "regulation
of RNA splicing" evidence=ISS] [GO:0051039 "positive regulation of
transcription during meiosis" evidence=ISS] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0042393 "histone binding" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=TAS]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0030154 GO:GO:0008380
GO:GO:0006397 GO:GO:0007283 GO:GO:0006351 EMBL:CH471097
GO:GO:0006338 GO:GO:0003713 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
EMBL:AF019085 EMBL:AY338951 EMBL:AK303008 EMBL:AK302758
EMBL:AK316442 EMBL:AC114486 EMBL:BC005281 EMBL:BC017582
EMBL:BC047900 EMBL:BC062700 IPI:IPI00479548 IPI:IPI00759691
RefSeq:NP_001229734.1 RefSeq:NP_001229735.1 RefSeq:NP_001229736.1
RefSeq:NP_001229737.1 RefSeq:NP_001229739.1 RefSeq:NP_001717.2
RefSeq:NP_997072.1 UniGene:Hs.482520 PDB:2RFJ PDB:4FLP PDBsum:2RFJ
PDBsum:4FLP ProteinModelPortal:Q58F21 SMR:Q58F21 IntAct:Q58F21
STRING:Q58F21 PhosphoSite:Q58F21 DMDM:226694198 PRIDE:Q58F21
DNASU:676 Ensembl:ENST00000362005 Ensembl:ENST00000370389
Ensembl:ENST00000399546 Ensembl:ENST00000402388 GeneID:676
KEGG:hsa:676 UCSC:uc001dok.4 CTD:676 GeneCards:GC01P092414
HGNC:HGNC:1105 HPA:CAB012237 HPA:HPA015283 MIM:602144
neXtProt:NX_Q58F21 PharmGKB:PA25418 InParanoid:Q58F21 KO:K11724
OMA:GVMKSSD OrthoDB:EOG4NVZJT ChEMBL:CHEMBL1795185 ChiTaRS:BRDT
EvolutionaryTrace:Q58F21 GenomeRNAi:676 NextBio:2784
ArrayExpress:Q58F21 Bgee:Q58F21 CleanEx:HS_BRDT
Genevestigator:Q58F21 GermOnline:ENSG00000137948 GO:GO:0001207
Uniprot:Q58F21
Length = 947
Score = 136 (52.9 bits), Expect = 7.5e-11, Sum P(4) = 7.5e-11
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E +N KK R N ++V L+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 18 EYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLN 77
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
TI++ L Y + ++D +F N YN+ I +M L + + L ++
Sbjct: 78 TIKKRLENKYYAKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKLFMQKLSQM 133
Score = 136 (52.9 bits), Expect = 0.00034, Sum P(2) = 0.00033
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E +N KK R N ++V L+ LW S PF++PVD KL PDY I+ PMDL
Sbjct: 18 EYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLN 77
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
TI++ L Y + ++D +F N YN+ I +M L + + L ++
Sbjct: 78 TIKKRLENKYYAKASECIEDFNTMFSNCYLYNK-PGDDIVLMAQALEKLFMQKLSQM 133
Score = 120 (47.3 bits), Expect = 7.5e-11, Sum P(4) = 7.5e-11
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDY 1565
P V ++ N K + C E+L+ + PF PVD L +Y
Sbjct: 250 PKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNY 309
Query: 1566 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 1625
+V PMDLGTI+E++ Y+ F DV+ +F N YN ++ M L +
Sbjct: 310 YDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDV 368
Query: 1626 AEEHLRRLTV 1635
E H ++ +
Sbjct: 369 FETHFSKIPI 378
Score = 120 (47.3 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDY 150
P V ++ N K + C E+L+ + PF PVD L +Y
Sbjct: 250 PKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNY 309
Query: 151 DKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEF 210
+V PMDLGTI+E++ Y+ F DV+ +F N YN ++ M L +
Sbjct: 310 YDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDH-EVVTMARMLQDV 368
Query: 211 AEEHLRRLTV 220
E H ++ +
Sbjct: 369 FETHFSKIPI 378
Score = 102 (41.0 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRIT 1432
C +I+ + S A PF PVD++ DL T++ + N+ Y+
Sbjct: 276 CSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAY 335
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEP-NPVD-VPVVY 1482
DVR + N K+N P +V AR++ D+ K P PV+ +P+ Y
Sbjct: 336 KFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCY 388
Score = 86 (35.3 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 26/108 (24%), Positives = 52/108 (48%)
Query: 1376 EKIITGLEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITS 1433
+K++ L+++ S + PF PVD Q DL T++ R +N++Y + +
Sbjct: 36 QKVV--LKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASE 93
Query: 1434 AQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVDVPVV 1481
D + +N +N+P +IV A+ + L ++ + + P + VV
Sbjct: 94 CIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM-PQEEQVV 140
Score = 72 (30.4 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 16/66 (24%), Positives = 35/66 (53%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T++ R +N++Y + + D + +N +N+P +IV A+ + L ++ + + P
Sbjct: 76 LNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM-P 134
Query: 61 VDVPVV 66
+ VV
Sbjct: 135 QEEQVV 140
Score = 48 (22.0 bits), Expect = 7.5e-11, Sum P(4) = 7.5e-11
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 1780 EESASESQEDENSIPETDTTEQPAK-KLKVLYPKRRGQQ-----SEDGSGDNASEMSELK 1833
+E E + N P + K K K PK+R QQ SED DNA M+ +
Sbjct: 457 KEKKKEKVNNSNENPRKMCEQMRLKEKSKRNQPKKRKQQFIGLKSEDE--DNAKPMNYDE 514
Query: 1834 QDPLSLH 1840
+ LSL+
Sbjct: 515 KRQLSLN 521
Score = 44 (20.5 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSI-P---ETDTTEQP 1802
D QP + ++ +S + S+S+S + E+ + P E + P
Sbjct: 623 DKTQPSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDSP 682
Query: 1803 AKK 1805
+K+
Sbjct: 683 SKE 685
Score = 41 (19.5 bits), Expect = 3.7e-10, Sum P(4) = 3.7e-10
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 1795 ETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLSLH 1840
+TD TE ++ G S+D + +++L++ ++H
Sbjct: 390 KTDITETTGRE-NTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVH 434
Score = 40 (19.1 bits), Expect = 7.5e-11, Sum P(4) = 7.5e-11
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 1126 PKRVRRHTKVKPIQVSLPKQLIPE 1149
P + + PI+ ++PK ++P+
Sbjct: 233 PTFTEKSVALPPIKENMPKNVLPD 256
Score = 37 (18.1 bits), Expect = 9.2e-10, Sum P(4) = 9.2e-10
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 1795 ETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLS 1838
++D T QP+K ++ + S S ++ S S+L S
Sbjct: 621 KSDKT-QPSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDSS 663
>MGI|MGI:1914632 [details] [associations]
symbol:Brd3 "bromodomain containing 3" species:10090 "Mus
musculus" [GO:0003682 "chromatin binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=ISO] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
MGI:MGI:1914632 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 PROSITE:PS51525
GeneTree:ENSGT00700000104261 HOGENOM:HOG000231200
HOVERGEN:HBG004896 CTD:8019 KO:K11721 OMA:NNNKKPA EMBL:AF269193
EMBL:BC031536 EMBL:AK037435 EMBL:AK076472 IPI:IPI00410791
IPI:IPI00410792 RefSeq:NP_001107045.1 RefSeq:NP_001107046.1
RefSeq:NP_075825.3 UniGene:Mm.28721 PDB:2L5E PDBsum:2L5E
ProteinModelPortal:Q8K2F0 SMR:Q8K2F0 STRING:Q8K2F0
PhosphoSite:Q8K2F0 PaxDb:Q8K2F0 PRIDE:Q8K2F0
Ensembl:ENSMUST00000028282 Ensembl:ENSMUST00000077737
Ensembl:ENSMUST00000113941 Ensembl:ENSMUST00000164296 GeneID:67382
KEGG:mmu:67382 EvolutionaryTrace:Q8K2F0 NextBio:324408 Bgee:Q8K2F0
CleanEx:MM_BRD3 Genevestigator:Q8K2F0 GermOnline:ENSMUSG00000026918
Uniprot:Q8K2F0
Length = 726
Score = 142 (55.0 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 152
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 15 PGPVNPPPPEVSNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 74
Query: 153 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 75 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 130
Score = 142 (55.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 1511 PTAVTRAQREAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDK 1567
P V E N K R N + V+ +TLW + PF +PVD KL+ PDY K
Sbjct: 15 PGPVNPPPPEVSNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHK 74
Query: 1568 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
I+ PMD+GTI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 75 IIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 130
Score = 117 (46.2 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 40/164 (24%), Positives = 72/164 (43%)
Query: 1327 SPWDLEPPKEGKE-ATEPGGSLPVEP--EEIQ--ELLYHPRPDEWPQGDRDATCEKIITG 1381
SP L PK+ K A G P++P ++++ E+ H + + C+ I+
Sbjct: 262 SPPPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGK-KGKLSEHLRHCDSILRE 320
Query: 1382 LEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVR 1439
+ + A PF PVD + DL+T++ + +R Y D+R
Sbjct: 321 MLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIR 380
Query: 1440 YLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVPVV 1481
+ +N K+N P +V AR + D+ +R K P+ P++ P +
Sbjct: 381 LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPMEAPAL 424
Score = 107 (42.7 bits), Expect = 7.4e-10, Sum P(4) = 7.4e-10
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 1552 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L+ DY I+ PMDL T++ ++ Y F D++ +F N YN
Sbjct: 332 PFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNP 391
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 392 PDH-EVVAMARKLQDVFEMRFAKM 414
Score = 40 (19.1 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 10/54 (18%), Positives = 18/54 (33%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
P++P + + P A +S S E+E + + EQ
Sbjct: 415 PDEPMEAPALPAPTAPIVSKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQ 468
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
ES+ S+E + +D+ E+ A +L L
Sbjct: 437 ESSRSSEESSSDSGSSDSEEERATRLAEL 465
Score = 39 (18.8 bits), Expect = 7.4e-10, Sum P(4) = 7.4e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQ 812
I+ ++LS K Y W F+ V+ +
Sbjct: 317 ILREMLSKKHAAYAWPFYKPVDAE 340
Score = 38 (18.4 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 883 PPHLMPPPFLVDLNGTPYPPEVQRLVPGRENADDT 917
PP PPP + P P V + + AD T
Sbjct: 214 PPAAPPPPATPIVPVVPPTPPVVKKKGVKRKADTT 248
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 1780 EESASESQEDENSIP-ET--DTTEQPAKKL--KVLYPKRRGQQSEDGSGDNASEMSELKQ 1834
E S +S DE I ET TT + ++ L K+R S G A EL Q
Sbjct: 604 EPSLRDSNPDEIEIDFETLKPTTLRELERYVKSCLQKKQRKPLSTSGKKQAAKSKEELAQ 663
Query: 1835 D 1835
+
Sbjct: 664 E 664
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 186 (70.5 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 74/313 (23%), Positives = 141/313 (45%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S + D
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSAARDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + S+S + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + + +++++ + + +++WD N ++ L
Sbjct: 324 DVSTGMCLM-TLVGHDNW-----VRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 NAHEHFVTSLDFH 389
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 143 (55.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/176 (30%), Positives = 83/176 (47%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI-AID---NR 529
GH V+ V F LG VT + D +LW A D + LR +G I+D+ ++ N
Sbjct: 557 GHTQPVWDVKFSPLGHYFVTASHDQTARLW-ATDH--IYPLRIFAGHINDVDCVEFHPNS 613
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
N + G+ DKT R+W++ T + V +GH VN + +G +LAS DG I
Sbjct: 614 NYVFT-GSSDKTCRMWDVHTGNCVRVFLGHTN---SVNCLAVSPDG-RWLASGGEDGIIC 668
Query: 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
W DI + + + + + R A + +FS G L +G D+ VRV+
Sbjct: 669 VW----DIGSGRRL--KSMRGHAR-----ASLYSLAFSRDGTVLVSGCADNSVRVW 713
Score = 130 (50.8 bits), Expect = 0.00034, P = 0.00034
Identities = 57/226 (25%), Positives = 93/226 (41%)
Query: 481 CVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT---------------LRGCSGEISDIA 525
C+ F+ ++ G D IKLW + DGK L + L G SG + ++
Sbjct: 466 CIEFNDDSTLVAAGFQDSYIKLW-SLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVS 524
Query: 526 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
N L + + DKT+R+W+L T + GH + V F PL G +Y + S D
Sbjct: 525 FSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL---G-HYFVTASHD 580
Query: 586 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH-ILCSSFSPGGLFLATGSGDHHVRV 644
W + ++ P+ RI G+ + + C F P ++ TGS D R+
Sbjct: 581 QTARLWA-------TDHIY--PL----RIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ + + L H++ V+ + S SG DG +W
Sbjct: 628 WDVHTGNCVRVFLG---HTNSVNCLAVSPDGRWLASGGEDGIICVW 670
Score = 129 (50.5 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V V + + +V T + + ++WD G+ V+V GHTN V L P D R L S
Sbjct: 604 VDCVEFHPNSNYVFTGSS-DKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSP-DGRWLASG 661
Query: 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGT 827
G DG+I +WDI S ++ + G +L+ +S DGT
Sbjct: 662 GEDGIICVWDIGSGRRL------KSMRGHARASLYSLAFSRDGT 699
Score = 117 (46.2 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 52/193 (26%), Positives = 82/193 (42%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL--------------VG 558
T + ++ I ++ + L+AAG D I++W+L SVL +G
Sbjct: 456 TFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIG 515
Query: 559 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618
H G + GV+F P YL S S D + W LD + V + +P
Sbjct: 516 HSGPVYGVSFSPDN----KYLLSCSEDKTVRLWS--LD------TYTALVSYKGHTQP-- 561
Query: 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678
+ FSP G + T S D R++ D + PL I H + VD +++ H + +
Sbjct: 562 --VWDVKFSPLGHYFVTASHDQTARLWATDHI-YPLRIFA--GHINDVDCVEF-HPNSNY 615
Query: 679 V-SGSRDGTALIW 690
V +GS D T +W
Sbjct: 616 VFTGSSDKTCRMW 628
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 187 (70.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 88/385 (22%), Positives = 157/385 (40%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV V F G+ + +G+ D ++ W T +G + I+ L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 171
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G + I +W+ T + L GH IT +++ PL N Y+AS+S DG + W
Sbjct: 172 ASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW 231
Query: 592 --------KYKLDIDISKTVFH---EPVMFN---ER-IRPGNAH--ILCSSFSPGGLFLA 634
+ S T + ++++ +R I+ AH +LC + G ++
Sbjct: 232 DTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Query: 635 TG--SGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL-------RFVSGSRDG 685
T S D+ +R + ++ + ++ ++ S +L R VSGS D
Sbjct: 292 TMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDF 351
Query: 686 TALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
T +W + K + T + + V + R +I + +F+
Sbjct: 352 TLFLW---------------SPAEDKKPLARMTGHQALINQVLFSPDSR-IIASASFDKS 395
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
IK+WD G + L+GH V+ + + DSR+L+S D + +WD+ + K
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGSSDSTLKVWDVKAQKLAAD--- 451
Query: 806 HNIVEGQGEGALFDGKWSPDGTTCA 830
+ G + ++ WSPDG A
Sbjct: 452 ---LPGHAD-EVYAVDWSPDGQRVA 472
Score = 156 (60.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + VLF +I + + D IKLW R GK LA+LRG + IA + LL
Sbjct: 370 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D T+++W+++ + L GH + V++ P +G +AS D C+ W+
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP---DG-QRVASGGKDKCLRIWR 484
>MGI|MGI:1336878 [details] [associations]
symbol:Taf1 "TAF1 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0004402 "histone acetyltransferase activity" evidence=ISO;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=ISO;IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0018105
"peptidyl-serine phosphorylation" evidence=ISO] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045120 "pronucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046777 "protein
autophosphorylation" evidence=ISO] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071339 "MLL1 complex"
evidence=ISO] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 MGI:MGI:1336878 GO:GO:0005524 GO:GO:0006355
GO:GO:0003677 GO:GO:0004674 GO:GO:0006352 PROSITE:PS50118
GO:GO:0007049 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0071339 InterPro:IPR018359 GO:GO:0045120
GO:GO:0004402 GO:GO:0005669 EMBL:AL806534 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOVERGEN:HBG050223 GeneTree:ENSGT00390000012659
HSSP:P21675 EMBL:AL831722 EMBL:BC047418 EMBL:BC094568 EMBL:AK045586
EMBL:AK046668 EMBL:AK049826 EMBL:AK050691 EMBL:AK132088
EMBL:AK143571 EMBL:AF081115 EMBL:AF081116 EMBL:AF081117
EMBL:AF022178 IPI:IPI00330385 IPI:IPI00671543 IPI:IPI00831185
UniGene:Mm.261750 ProteinModelPortal:Q80UV9 SMR:Q80UV9
STRING:Q80UV9 PhosphoSite:Q80UV9 PRIDE:Q80UV9
Ensembl:ENSMUST00000118878 Ensembl:ENSMUST00000149274
UCSC:uc009txx.1 UCSC:uc009txy.1 Bgee:Q80UV9 Genevestigator:Q80UV9
Uniprot:Q80UV9
Length = 1891
Score = 153 (58.9 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 36/101 (35%), Positives = 58/101 (57%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++++PMDL TIR+ + Y+S F+ DV
Sbjct: 1536 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1596 ILANSVKYNGPESQYTKTAQEIVNVCHQTLTEY-DEHLTQL 1635
Score = 153 (58.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 36/101 (35%), Positives = 58/101 (57%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K++++PMDL TIR+ + Y+S F+ DV
Sbjct: 1536 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 185 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 218
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1596 ILANSVKYNGPESQYTKTAQEIVNVCHQTLTEY-DEHLTQL 1635
Score = 122 (48.0 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1421 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1480
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1481 NGPKHSLTQISQSML-DLCDEKLK 1503
Score = 66 (28.3 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1401 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1460
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1461 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1504
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1448 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1504
Score = 49 (22.3 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGYKILWDNN---ERENLSPWDL 1331
T A +NV F + +DD W +I P + L Y W++N + +N+ P L
Sbjct: 463 TRNAMAYNVQQGFTATLDDDKPWYSI----FPIDNEDLVYG-RWEDNIIWDAQNM-PRIL 516
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 517 EPPVLTLDPNDENLILEI-PDEKEE 540
Score = 43 (20.2 bits), Expect = 4.6e-05, Sum P(5) = 4.6e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 689 PQDLTGKDGDLILAEYSEENGPLMMQV 715
Score = 42 (19.8 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+ Q+ DG GD A E Q P
Sbjct: 1704 KQLTQEGGDGDGDLADEEEGTVQQP 1728
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 878 EVTNLPPHLMPPPFLVDLNGT----PYPPEVQRLV---PGRENADDTELLPD-ITTNDDG 929
+ N+P L PP +D N P E + P +EN ++ L I G
Sbjct: 508 DAQNMPRILEPPVLTLDPNDENLILEIPDEKEEATSNSPSKENKKESSLKKSRILLGKTG 567
Query: 930 HVEIVEGSERNGERPVEVEGQRHYNDHGHVY 960
++ E ++N +P EV+ + ++ + Y
Sbjct: 568 VIK--EEPQQNMSQP-EVKDPWNLSNDEYYY 595
Score = 40 (19.1 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S N +D
Sbjct: 1117 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSAAAGNNHRD 1168
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQE 308
V S EVLS S ++DF+ E E L + + +L+R +E
Sbjct: 1097 VLSSTEVLSTDTDSSSAEDSDFE-----EMGKNIENMLQNKKTSSQLSREREE 1144
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 566 TGVIKEEPQQNMSQPEVKDPWNLSND 591
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1322 ERENLSPWDLEPPKEGKEATEPGG 1345
+ NLS D+ K+ T+ GG
Sbjct: 1688 DESNLSVLDIPSATSEKQLTQEGG 1711
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 188 (71.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 61/225 (27%), Positives = 108/225 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH ++ + F G I +G+ D ++LW +GKL+ TL G ++ +A+ + +
Sbjct: 356 GHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYV 414
Query: 534 AAGTVDKTIRIWNLQTLAPISVLV---GHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
AAG++DKT+R+W+ T + L GH+ + V F P NG L S S D I
Sbjct: 415 AAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAP---NG-KELVSGSLDKTIKL 470
Query: 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAH---ILCSSFSPGGLFLATGSGDHHVRVYKM 647
W ++++ + ++ + R H +L +P G ++ +GS D V+ +
Sbjct: 471 W----ELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFW-- 524
Query: 648 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYY 692
D + ++ ++ H + V S+ S + F +GS D A IW Y
Sbjct: 525 DPITGNAQMM-LQGHKNSVISVAPSPTGNLFATGSGDMRARIWRY 568
Score = 167 (63.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 68/231 (29%), Positives = 105/231 (45%)
Query: 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG----CSGE--ISDIA 525
+L H S V CV F + G+ + TG + +++ G+ +A L+ SG+ I +
Sbjct: 265 HLVHDSVVCCVRFSRDGKYLATGCNRSA-QIFDVTLGQNVAVLQDESVDKSGDLYIRSVC 323
Query: 526 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
LA G DK IR+W++ T + GH+ I ++F NG Y+AS S D
Sbjct: 324 FSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAG---NG-RYIASGSGD 379
Query: 586 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV- 644
+ W DI K V+ I G + + SP GL++A GS D VRV
Sbjct: 380 KTVRLW----DIAEGKLVY------TLSIEDG---VTTVAMSPDGLYVAAGSLDKTVRVW 426
Query: 645 -----YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
Y ++ +++P G H D V S+ ++ + VSGS D T +W
Sbjct: 427 DTTTGYLVERLENPDG------HKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
>UNIPROTKB|E1C8U8 [details] [associations]
symbol:BRD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006357 GO:GO:0003682
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104261 CTD:8019 KO:K11721
OMA:NNNKKPA EMBL:AADN02026448 EMBL:AADN02026449 IPI:IPI00597724
RefSeq:XP_425330.2 UniGene:Gga.9809 PRIDE:E1C8U8
Ensembl:ENSGALT00000004226 GeneID:427757 KEGG:gga:427757
NextBio:20828931 Uniprot:E1C8U8
Length = 722
Score = 138 (53.6 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 38/108 (35%), Positives = 56/108 (51%)
Query: 105 EAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N K R N + V+ +TLW + PF +PVD KL+ PDY KI+ PMD+G
Sbjct: 21 EVTNPNKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMG 80
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
TI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 81 TIKKRLEHNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 127
Score = 138 (53.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 38/108 (35%), Positives = 56/108 (51%)
Query: 1520 EAMNQKKLKRPFNWKNECREVL-ETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N K R N + V+ +TLW + PF +PVD KL+ PDY KI+ PMD+G
Sbjct: 21 EVTNPNKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMG 80
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
TI++ L + Y S + ++D +F N YN+ I +M L +
Sbjct: 81 TIKKRLEHNYYWSASECMQDFNTMFTNCYIYNK-PTDDIVLMAQALEK 127
Score = 119 (46.9 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 1327 SPWDLEPPKEGKE-ATEPGGSLPVEP--EEIQ--ELLYHPRPDEWPQGDRDATCEKIITG 1381
SP L PK+ K A G P++P ++++ E+ H + + C+ I+
Sbjct: 259 SPTPLSDPKQAKIIARRESGGRPIKPPKKDLEDGEVPQHAGK-KGKLSEHLKYCDSILKE 317
Query: 1382 LEEVMGLSVAEPFLVPVDIS--QXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVR 1439
+ + A PF PVD + DL+T++ + +R Y+ D+R
Sbjct: 318 MLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQGFAADIR 377
Query: 1440 YLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-PVDVP 1479
+ +N K+N P +V AR + D+ +R K P+ P + P
Sbjct: 378 LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPAEAP 419
Score = 111 (44.1 bits), Expect = 7.5e-10, Sum P(4) = 7.5e-10
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 1552 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L+ DY I+ PMDL T+++++ Y+ F D++ +F N YN
Sbjct: 329 PFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQGFAADIRLMFSNCYKYNP 388
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 389 PDH-EVVAMARKLQDVFEMRFAKM 411
Score = 40 (19.1 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1781 ESASESQEDENSIPETDTTEQPAKKLKVL 1809
ES+ S+E + +D+ E+ A +L L
Sbjct: 434 ESSHSSEESSSDSDSSDSEEERATRLAEL 462
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 883 PPHLMPPPFLVDLNGT--PYPPEVQRLVPGRENADDTELLPDITT 925
PP PPP + P PP V++ R+ AD T + T
Sbjct: 210 PPAAAPPPPAAPIMPVVPPTPPVVKKKGVKRK-ADTTTPTTSVIT 253
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
P++P + P A +S S E+E + + EQ
Sbjct: 412 PDEPAEAPPPPPPTAPVVSKSTESSHSSEESSSDSDSSDSEEERATRLAELQEQ 465
Score = 39 (18.8 bits), Expect = 7.5e-10, Sum P(4) = 7.5e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 790 IIWDILSSKQRGYKW-FHNIVEGQ 812
I+ ++LS K Y W F+ V+ +
Sbjct: 314 ILKEMLSKKHAAYAWPFYKPVDAE 337
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(4) = 2.4e-10
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 1780 EESASESQEDENSIP-ET--DTTEQPAKKL--KVLYPKRRGQQSEDGSGDNASEMSELKQ 1834
E S +S DE I ET TT + ++ L K+R S G A EL Q
Sbjct: 599 EPSLRDSNPDEIEIDFETLKPTTLRELERYVKSCLQKKQRKPFSASGKKQAAKSKEELAQ 658
Query: 1835 D 1835
+
Sbjct: 659 E 659
>UNIPROTKB|I3LP77 [details] [associations]
symbol:I3LP77 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK Ensembl:ENSSSCT00000032456
Uniprot:I3LP77
Length = 1549
Score = 147 (56.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++++PMDL TIR+ + Y+S F+ DV
Sbjct: 1480 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1539
Query: 1600 VFHNSRNYN 1608
+ NS YN
Sbjct: 1540 ILANSVKYN 1548
Score = 147 (56.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K++++PMDL TIR+ + Y+S F+ DV
Sbjct: 1480 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1539
Query: 185 VFHNSRNYN 193
+ NS YN
Sbjct: 1540 ILANSVKYN 1548
Score = 118 (46.6 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1364 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1423
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N + ++ + + +E L+
Sbjct: 1424 NDGTHADTDXISQSMLDLCDEKLK 1447
Score = 56 (24.8 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 22/105 (20%), Positives = 40/105 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1344 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1403
Query: 1429 RRITSAQFDVRYLAANAEKFNE-PHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N+ H++ ++ + DL +KE
Sbjct: 1404 PSREEFREHLELIVKNSATYNDGTHADTDXISQSMLDLCDEKLKE 1448
Score = 44 (20.5 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD L L
Sbjct: 406 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEELVYGRWEDNIIWDAQAMPRL----L 459
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 460 EPPVLTLDPNDENLILEI-PDEKEE 483
Score = 43 (20.2 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 632 PQDLTGKDGDLILAEYSEENGPLMMQV 658
Score = 43 (20.2 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S + N +D
Sbjct: 1060 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSATSGNNHRD 1111
Score = 39 (18.8 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQE 308
V S EVLS S ++DF+ E E L + + +L+R +E
Sbjct: 1040 VLSSTEVLSTDTDSSSAEDSDFE-----EMGKNIENMLQNKKTSSQLSREREE 1087
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 509 TGVIKEEPQQNMSQPEVKDPWNLSND 534
>ZFIN|ZDB-GENE-990415-248 [details] [associations]
symbol:brd2a "bromodomain-containing 2a"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 ZFIN:ZDB-GENE-990415-248 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
HOGENOM:HOG000231200 HOVERGEN:HBG004896 OrthoDB:EOG4NZTT4
EMBL:EU126946 IPI:IPI00608482 UniGene:Dr.75177
ProteinModelPortal:A8CYQ7 SMR:A8CYQ7 STRING:A8CYQ7 NextBio:20806843
ArrayExpress:A8CYQ7 Bgee:A8CYQ7 Uniprot:A8CYQ7
Length = 838
Score = 133 (51.9 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 123 REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK 180
+ +++TLW + PF +PVD KL+ PDY I+ PMD+GTI++ L + Y S + ++
Sbjct: 82 KALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQ 141
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
D +F N YN+ I +M L +
Sbjct: 142 DFNTMFTNCYIYNK-PTDDIVLMAQSLEK 169
Score = 133 (51.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 1538 REVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVK 1595
+ +++TLW + PF +PVD KL+ PDY I+ PMD+GTI++ L + Y S + ++
Sbjct: 82 KALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQ 141
Query: 1596 DVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
D +F N YN+ I +M L +
Sbjct: 142 DFNTMFTNCYIYNK-PTDDIVLMAQSLEK 169
Score = 115 (45.5 bits), Expect = 2.2e-10, Sum P(4) = 2.2e-10
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I++ PMDL TI+ ++ Y + F DV+ +F N YN
Sbjct: 407 PFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNP 466
Query: 1610 NKRSKIYIMTTRLSEFAE 1627
+ M RL + E
Sbjct: 467 PDHD-VVAMARRLQDVFE 483
Score = 115 (45.5 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 137 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
PF KPVD L DY I++ PMDL TI+ ++ Y + F DV+ +F N YN
Sbjct: 407 PFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNP 466
Query: 195 NKRSKIYIMTTRLSEFAE 212
+ M RL + E
Sbjct: 467 PDHD-VVAMARRLQDVFE 483
Score = 110 (43.8 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 39/150 (26%), Positives = 66/150 (44%)
Query: 1336 EGKEATEPGGS-LPVEP--EEIQELLYHPRPDEWPQGDRDAT-CEKIITGLEEVMGLSVA 1391
E K GGS P++P +++ + +P + + C I+ L + A
Sbjct: 346 EDKVPARRGGSGRPIKPPRKDLPDSQNQHQPVRRGKLSQQLRYCSTILKELLSKKHTAYA 405
Query: 1392 EPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFN 1449
PF PVD+S DL+T++ + +R YR DVR + +N K+N
Sbjct: 406 WPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYN 465
Query: 1450 EPHSNIVKYARIITDLL-LRIIKEPN-PVD 1477
P ++V AR + D+ R K P+ P++
Sbjct: 466 PPDHDVVAMARRLQDVFEFRFAKMPDEPLE 495
Score = 75 (31.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD ++ D+ T++ R +N +YR + D + N +
Sbjct: 94 AWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIY 153
Query: 1449 NEPHSNIVKYARIITDLLLRIIKEPNPVD 1477
N+P +IV A+ + L+ + + V+
Sbjct: 154 NKPTDDIVLMAQSLEKAFLQKVAQMPEVE 182
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 3 TLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVD 62
T++ R +N +YR + D + N +N+P +IV A+ + L+ + + V+
Sbjct: 123 TIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPEVE 182
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 15/62 (24%), Positives = 22/62 (35%)
Query: 1748 PEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKLK 1807
P++P S A E S E E+S P +D+ E+ A +L
Sbjct: 490 PDEPLESLPPASLGGGLGGDSSSSSSSSSSSSESDVSSESESESS-PSSDSEEERAHRLA 548
Query: 1808 VL 1809
L
Sbjct: 549 QL 550
Score = 38 (18.4 bits), Expect = 2.2e-10, Sum P(4) = 2.2e-10
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 790 IIWDILSSKQRGYKW-FHNIVE 810
I+ ++LS K Y W F+ V+
Sbjct: 392 ILKELLSKKHTAYAWPFYKPVD 413
Score = 37 (18.1 bits), Expect = 5.1e-09, Sum P(4) = 5.1e-09
Identities = 10/49 (20%), Positives = 18/49 (36%)
Query: 1762 ASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAKKLKVLY 1810
+S+S E S S E+E + EQ +L+ ++
Sbjct: 514 SSSSSSSSESDVSSESESESSPSSDSEEERAHRLAQLQEQVCTQLRAVH 562
>UNIPROTKB|F7DRV9 [details] [associations]
symbol:brdt "Bromodomain testis-specific protein"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0001207 "histone
displacement" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] [GO:0007141 "male meiosis
I" evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0043484 "regulation of RNA splicing" evidence=ISS] [GO:0051039
"positive regulation of transcription during meiosis" evidence=ISS]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISS]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0030154 GO:GO:0007283
GO:GO:0006351 GO:GO:0016568 GO:GO:0043484 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359
GO:GO:0051039 PROSITE:PS51525 GO:GO:0007141
GeneTree:ENSGT00700000104261 GO:GO:0001207 EMBL:AAMC01026645
EMBL:AAMC01026646 EMBL:AAMC01026647 EMBL:AAMC01026648
Ensembl:ENSXETT00000049781 Uniprot:F7DRV9
Length = 933
Score = 155 (59.6 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 44/126 (34%), Positives = 66/126 (52%)
Query: 92 RRVRPTAVTRAQREAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHP 148
R + + V E +N+KK R N +V L+ LW S PF++PVD KL+ P
Sbjct: 6 RHLHSSIVNPPPPEYINRKKTGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLP 65
Query: 149 DYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLS 208
DY +I+ PMDL TIR+ L + Y +D ++D +F N YN+ I +M+ L
Sbjct: 66 DYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNK-PGDDIVVMSQELE 124
Query: 209 E-FAEE 213
+ F E+
Sbjct: 125 KVFMEK 130
Score = 155 (59.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 44/126 (34%), Positives = 66/126 (52%)
Query: 1507 RRVRPTAVTRAQREAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHP 1563
R + + V E +N+KK R N +V L+ LW S PF++PVD KL+ P
Sbjct: 6 RHLHSSIVNPPPPEYINRKKTGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLP 65
Query: 1564 DYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLS 1623
DY +I+ PMDL TIR+ L + Y +D ++D +F N YN+ I +M+ L
Sbjct: 66 DYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNK-PGDDIVVMSQELE 124
Query: 1624 E-FAEE 1628
+ F E+
Sbjct: 125 KVFMEK 130
Score = 100 (40.3 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 35/155 (22%), Positives = 59/155 (38%)
Query: 1375 CEKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSA 1434
C I+ + A PF V + DL T+R + +N Y+
Sbjct: 287 CNNILNEMMSKKHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDF 346
Query: 1435 QFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRII-KEPNPVDVPVVYHELLQNYXXXX 1493
DVR + N+ K+N P + +V AR + D+ + K P D P+ +++ Y
Sbjct: 347 ASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKIP---DDPLATQSMVERYKTST 403
Query: 1494 XXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLK 1528
Q + RAQ A+ Q++L+
Sbjct: 404 EESSSSSSS--EQSSSSDSEDERAQHLALLQEQLR 436
Score = 99 (39.9 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 1537 CREVLETLWVCPDSE---PFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDF 1593
C +L + +E PF K V D + PMDL TIR+++ Y+ DF
Sbjct: 287 CNNILNEMMSKKHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDF 346
Query: 1594 VKDVKRVFHNSRNYN 1608
DV+ +F NS YN
Sbjct: 347 ASDVRLMFMNSYKYN 361
Score = 49 (22.3 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSE 1819
EES+S S +++S +D+ ++ A+ L +L + R Q +
Sbjct: 404 EESSSSSSSEQSS--SSDSEDERAQHLALLQEQLRAVQEQ 441
Score = 39 (18.8 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 6/33 (18%), Positives = 19/33 (57%)
Query: 1585 DNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYI 1617
D Y+ + ++ + ++ +NY+ K+ K+++
Sbjct: 464 DKYKQWVKCIEPMGKLLKRKKNYDAKKK-KLHV 495
Score = 37 (18.1 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 987 SGTAPTAQNKNFVKRLPLSQHKI 1009
SGT T + LP SQH I
Sbjct: 250 SGTEKTRSAETSAVDLPDSQHHI 272
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 189 (71.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 77/338 (22%), Positives = 148/338 (43%)
Query: 474 GHLSAVF-CVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH+++V C+ F+ ++TGADD +I+++ + + K L L G G + + + IL
Sbjct: 379 GHMTSVITCLQFED--NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGIL 436
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
++ G+ D+T+R+W+++ V GH + ++ +E Y+ + S D + WK
Sbjct: 437 VS-GSTDRTVRVWDIKKGCCTHVFKGHNSTVRCLDI--VEYKNIKYIVTGSRDNTLHVWK 493
Query: 593 YKLDIDISK--------TVFHEPVMFNERIRPGNAHILC-SSFSPGGLFLATGSGDHHVR 643
+ + VFH P + H+ + S G + +GS D+ +
Sbjct: 494 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 553
Query: 644 VYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLD 703
V+ + + L IL H+D++ S + H R +S S D T IW + + W
Sbjct: 554 VWDVAQMKC-LYILS--GHTDRIYSTIYDHERKRCISASMDTTIRIWDLE-NIWNNGECS 609
Query: 704 M--NTCLPHTKETSDETNKKIKVTMVAW-DASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
N+ P K + +V SD+++++A + I+ WDA D +
Sbjct: 610 YATNSASPCAKILGAMYTLQGHTALVGLLRLSDKFLVSAAA-DGSIRGWDA--NDYSRKF 666
Query: 761 KGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798
H + + + +L+S G + I+++ S K
Sbjct: 667 SYHHTNLSAITTFYVSDNILVS-GSENQFNIYNLRSGK 703
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 185 (70.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 96/383 (25%), Positives = 160/383 (41%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV F G+ V+ D +++W TL+G + + +A + +
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKI 197
Query: 534 AAGTVDKTIRIWNLQTLAPI-SVLVGHQGIITGVNFCPLEVNGFNY-LASTSTDGCIGFW 591
A ++ IRIW QT + S L GH ITG+++ P +N LAS+S D I W
Sbjct: 198 ATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIW 257
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651
D + K + + + C + GL + +GS D VRV+ D
Sbjct: 258 ----DTESCKNLMS--------LSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNT--TD 302
Query: 652 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT-------------ALIWY--YKC-S 695
L + ++ H+ V+++ + ++ +GS D T AL Y K S
Sbjct: 303 GRL-VRVLDGHAHWVNTLALNTDYV-LRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKS 360
Query: 696 QWRFIRL----DMNTCL--PHTKETSDE--TNKKIKVTMVAWDASDRWVITAINFNFQIK 747
+ I + D + P +TS T + + +V++ R+ +A +F+ IK
Sbjct: 361 KGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASA-SFDKSIK 419
Query: 748 IWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHN 807
+WD +G + +GH V+ + DSR L+S D + IWDI + K
Sbjct: 420 LWDGQSGKFLGNFRGHVGAVYQV-CWSSDSRYLVSGSKDSTLKIWDIKTKKME------K 472
Query: 808 IVEGQGEGALFDGKWSPDGTTCA 830
+ G + ++ WSPDG A
Sbjct: 473 ELPGHAD-EVYTVDWSPDGDRVA 494
Score = 134 (52.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V F G + + D IKLW + GK L RG G + + + + L
Sbjct: 392 GHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYL 451
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+G+ D T++IW+++T L GH + V++ P +G + +AS S D + W
Sbjct: 452 VSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSP---DG-DRVASGSKDRLLRIW 505
>UNIPROTKB|E1C6T8 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:AADN02043770
IPI:IPI00580489 RefSeq:NP_001157867.1 UniGene:Gga.7902
ProteinModelPortal:E1C6T8 PRIDE:E1C6T8 Ensembl:ENSGALT00000005281
GeneID:419653 KEGG:gga:419653 NextBio:20822680 Uniprot:E1C6T8
Length = 325
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 72/324 (22%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D R++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVDADWDTRHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T ++++ + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALVKTSSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G F+ G + +
Sbjct: 120 CFVSFFDLRDPSQIENNEPYM---KIPCSDSKITSAVWGPLGEFIIAGHESGELNQFSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ + ++EH+ +++ IQ S F++ S+D TA + + C+ ++ T
Sbjct: 177 SGEQ---LSNIKEHTKQINDIQTSRDMTMFITASKDNTAKL--FDCTTLEHLKT-FRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAALSPIFDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|P21675 [details] [associations]
symbol:TAF1 "Transcription initiation factor TFIID subunit
1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA;TAS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0005669 "transcription factor
TFIID complex" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=TAS] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISS]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0002039 "p53 binding" evidence=IPI] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IC] [GO:0070577 "histone acetyl-lysine
binding" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0018105 "peptidyl-serine
phosphorylation" evidence=IDA] [GO:0017025 "TBP-class protein
binding" evidence=IPI] [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=IGI] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001487
InterPro:IPR011177 Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503
PROSITE:PS50011 PROSITE:PS50014 SMART:SM00297 GO:GO:0005524
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032 GO:GO:0004674
GO:GO:0043565 GO:GO:0045944 GO:GO:0046777 GO:GO:0018105
GO:GO:0006974 PROSITE:PS50118 GO:GO:0003713 GO:GO:0018107
GO:GO:0006368 GO:GO:0032436 PDB:3AAD PDBsum:3AAD Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0071339
GO:GO:0070577 InterPro:IPR018359 GO:GO:0000080 GO:GO:0000117
Reactome:REACT_1788 GO:GO:0004402 GO:GO:0005669 GO:GO:0060261
GO:GO:0051123 KO:K03125 InterPro:IPR022591 Pfam:PF12157
Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
HOVERGEN:HBG050223 OrthoDB:EOG4K3KVC CTD:6872 EMBL:D90359
EMBL:X07024 EMBL:AY623109 EMBL:AB209316 EMBL:AJ549247 EMBL:AJ549248
EMBL:AJ549249 EMBL:AJ549250 EMBL:AJ555148 EMBL:AJ555149
EMBL:AM711894 IPI:IPI00009891 IPI:IPI00645793 IPI:IPI00828032
IPI:IPI00939191 PIR:A40262 RefSeq:NP_004597.2 RefSeq:NP_620278.1
UniGene:Hs.158560 PDB:1EQF PDB:3UV4 PDB:3UV5 PDBsum:1EQF
PDBsum:3UV4 PDBsum:3UV5 ProteinModelPortal:P21675 SMR:P21675
DIP:DIP-147N DIP:DIP-24198N IntAct:P21675 MINT:MINT-1211825
STRING:P21675 PhosphoSite:P21675 DMDM:115942 PaxDb:P21675
PRIDE:P21675 Ensembl:ENST00000276072 Ensembl:ENST00000373790
Ensembl:ENST00000449580 GeneID:6872 KEGG:hsa:6872 UCSC:uc004dzt.4
UCSC:uc004dzu.4 UCSC:uc004dzv.4 GeneCards:GC0XP070586
HGNC:HGNC:11535 HPA:CAB016283 HPA:HPA001075 MIM:313650 MIM:314250
neXtProt:NX_P21675 Orphanet:53351 PharmGKB:PA36310 OMA:DEFYYPK
EvolutionaryTrace:P21675 GenomeRNAi:6872 NextBio:26827
ArrayExpress:P21675 Bgee:P21675 Genevestigator:P21675
GermOnline:ENSG00000147133 Uniprot:P21675
Length = 1872
Score = 150 (57.9 bits), Expect = 2.3e-10, Sum P(5) = 2.3e-10
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 1515 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 1574
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1575 ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1614
Score = 150 (57.9 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 1515 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 1574
Query: 185 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 218
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1575 ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1614
Score = 122 (48.0 bits), Expect = 2.3e-10, Sum P(5) = 2.3e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1400 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1459
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1460 NGPKHSLTQISQSML-DLCDEKLK 1482
Score = 66 (28.3 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1380 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1439
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1440 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1483
Score = 51 (23.0 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1427 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1483
Score = 48 (22.0 bits), Expect = 2.3e-10, Sum P(5) = 2.3e-10
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+ Q+ EDG GD A E Q P
Sbjct: 1683 KQVTQEGEDGDGDLADEEEGTVQQP 1707
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD L L
Sbjct: 442 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEDLVYGRWEDNIIWDAQAMPRL----L 495
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 496 EPPVLTLDPNDENLILEI-PDEKEE 519
Score = 43 (20.2 bits), Expect = 4.1e-05, Sum P(6) = 4.1e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 668 PQDLTGKDGDLILAEYSEENGPLMMQV 694
Score = 43 (20.2 bits), Expect = 4.1e-05, Sum P(6) = 4.1e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S + N +D
Sbjct: 1096 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSAASGNNHRD 1147
Score = 40 (19.1 bits), Expect = 2.3e-10, Sum P(5) = 2.3e-10
Identities = 12/55 (21%), Positives = 20/55 (36%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
DP PGP T + T+ E + S + ++ PE T++
Sbjct: 1635 DPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVL-DIPSATPEKQVTQE 1688
Score = 39 (18.8 bits), Expect = 9.5e-05, Sum P(6) = 9.5e-05
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQE 308
V S EVLS S ++DF+ E E L + + +L+R +E
Sbjct: 1076 VLSSTEVLSTDTDSSSAEDSDFE-----EMGKNIENMLQNKKTSSQLSREREE 1123
Score = 38 (18.4 bits), Expect = 2.3e-10, Sum P(5) = 2.3e-10
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 545 TGVIKEEPQQNMSQPEVKDPWNLSND 570
>RGD|1562050 [details] [associations]
symbol:Taf1 "TAF1 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004402 "histone acetyltransferase activity"
evidence=ISO] [GO:0004674 "protein serine/threonine kinase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0018105
"peptidyl-serine phosphorylation" evidence=ISO] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045120 "pronucleus" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046777 "protein autophosphorylation"
evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001487 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1562050 GO:GO:0005634 GO:GO:0006355 GO:GO:0042493
GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0045120 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055 OrthoDB:EOG4K3KVC
IPI:IPI00951101 Ensembl:ENSRNOT00000066825 UCSC:RGD:1562050
ArrayExpress:D3ZM43 Uniprot:D3ZM43
Length = 1902
Score = 150 (57.9 bits), Expect = 2.3e-10, Sum P(4) = 2.3e-10
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 1547 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 1606
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1607 ILANSVKYNGPESQYTKTAQEIVNVCHQTLTEY-DEHLTQL 1646
Score = 150 (57.9 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 1547 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 1606
Query: 185 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 218
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1607 ILANSVKYNGPESQYTKTAQEIVNVCHQTLTEY-DEHLTQL 1646
Score = 122 (48.0 bits), Expect = 2.3e-10, Sum P(4) = 2.3e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1432 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1491
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1492 NGPKHSLTQISQSML-DLCDEKLK 1514
Score = 66 (28.3 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1412 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1471
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1472 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1515
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1459 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1515
Score = 43 (20.2 bits), Expect = 9.2e-05, Sum P(5) = 9.2e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 695 PQDLTGKDGDLILAEYSEENGPLMMQV 721
Score = 42 (19.8 bits), Expect = 2.3e-10, Sum P(4) = 2.3e-10
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+ Q+ DG GD A E Q P
Sbjct: 1715 KQLTQEGGDGDGDLADEEEGTVQQP 1739
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(5) = 0.00014
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQELMLLIIK 315
V S EVLS S ++DF+ K S + ER + +EL ++++
Sbjct: 1103 VLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLE 1162
Query: 316 YLEK 319
+K
Sbjct: 1163 ADDK 1166
Score = 40 (19.1 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 878 EVTNLPPHLMPPPFLVDLNGT----PYPPEVQRLV---PGRENADDTELLPD-ITTNDDG 929
+ N+P L PP +D N P E + P +EN ++ L I G
Sbjct: 514 DAQNMPRILEPPVLTLDPNDENLILEIPDEKEEATSNSPSKENKKESSLKKSRILLGKTG 573
Query: 930 HVEIVEGSERNGERPVEVEGQRHYNDHGHVY 960
++ E ++N +P EV+ + ++ + Y
Sbjct: 574 VIK--EEPQQNMSQP-EVKDPWNLSNDEYYY 601
Score = 38 (18.4 bits), Expect = 2.3e-10, Sum P(4) = 2.3e-10
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 572 TGVIKEEPQQNMSQPEVKDPWNLSND 597
Score = 38 (18.4 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1322 ERENLSPWDLEPPKEGKEATEPGG 1345
+ NLS D+ K+ T+ GG
Sbjct: 1699 DESNLSVLDIPSATSEKQLTQEGG 1722
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 182 (69.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 76/313 (24%), Positives = 137/313 (43%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + ++V+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
+ W+ + H + +RP G LA+ S D VRV+ +
Sbjct: 216 MKMWEVATGYCVKTFTGHREWV--RMVRPNQ----------DGTLLASCSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + +H + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++T CL T D V V + R+V++ + + ++IWD N ++ L
Sbjct: 324 DISTGMCLM-TLVGHDNW-----VRGVLFHPGGRFVVSCAD-DKTLRIWDYKNKRCMKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 SAHEHFVTSLDFH 389
>UNIPROTKB|J9NZ21 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK EMBL:AAEX03026487
Ensembl:ENSCAFT00000043925 Uniprot:J9NZ21
Length = 1926
Score = 154 (59.3 bits), Expect = 3.0e-10, Sum P(4) = 3.0e-10
Identities = 37/101 (36%), Positives = 58/101 (57%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++I+PMDL TIR+ + Y+S F+ DV
Sbjct: 1536 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1596 ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1635
Score = 154 (59.3 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 37/101 (36%), Positives = 58/101 (57%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K++I+PMDL TIR+ + Y+S F+ DV
Sbjct: 1536 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 185 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 218
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1596 ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1635
Score = 122 (48.0 bits), Expect = 3.0e-10, Sum P(4) = 3.0e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1421 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1480
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1481 NGPKHSLTQISQSML-DLCDEKLK 1503
Score = 66 (28.3 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1401 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1460
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1461 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1504
Score = 51 (23.0 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1448 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1504
Score = 44 (20.5 bits), Expect = 4.9e-10, Sum P(5) = 4.9e-10
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 1811 PKRRGQQSEDGSGDNASEMSELKQDP 1836
PK + ED GD A E Q P
Sbjct: 1737 PKTPAPEGEDADGDLADEEEGSMQQP 1762
Score = 44 (20.5 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD L L
Sbjct: 463 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEELVYGRWEDNIIWDAQAMPRL----L 516
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 517 EPPVLTLDPNDENLILEI-PDEKEE 540
Score = 43 (20.2 bits), Expect = 8.8e-05, Sum P(6) = 8.8e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 689 PQDLTGKDGDLILAEYSEENGPLMMQV 715
Score = 43 (20.2 bits), Expect = 8.8e-05, Sum P(6) = 8.8e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S + N +D
Sbjct: 1117 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSAASGNNHRD 1168
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(4) = 3.0e-10
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 566 TGVIKEEPQQNMSQPEVKDPWNLSND 591
Score = 38 (18.4 bits), Expect = 0.00025, Sum P(6) = 0.00025
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQE 308
V S E+LS S ++DF+ E E L + + +L+R +E
Sbjct: 1097 VLSSTEILSTDTDSSSAEDSDFE-----EMGKNIENMLQNKKTSSQLSREREE 1144
Score = 37 (18.1 bits), Expect = 3.0e-10, Sum P(4) = 3.0e-10
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 1783 ASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLS 1838
A E ++ + + + + + VLY + ED D S+ E +P S
Sbjct: 1741 APEGEDADGDLADEEEGSMQQPQASVLYEDLLMSEGEDDEEDAGSD--EEGDNPFS 1794
Score = 37 (18.1 bits), Expect = 4.9e-10, Sum P(5) = 4.9e-10
Identities = 12/54 (22%), Positives = 18/54 (33%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTE 1800
DP PGP T + T+ E + S + + PE T+
Sbjct: 1656 DPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVL-DIPTATPEKQVTQ 1708
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 152 (58.6 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V V F G +I + D KLW ARDGK + TLRG + + + L
Sbjct: 410 IGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRL 469
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
L + D T+++WN++T + L GH+ + GV++ P +G + S D + W+
Sbjct: 470 LVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSP---DG-QRVGSGGRDKAVRLWR 525
Score = 135 (52.6 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 616 PGNAH-ILCSSFSPGGLF-LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSH 673
PG+ ILC+ FSP LATGSGD+ R++ + +P L+ H+ V + WS
Sbjct: 149 PGHGEPILCAQFSPASSARLATGSGDNTARIWDAE-TGTPKHTLK--GHAGWVLGVSWSP 205
Query: 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK-VTMVAWDAS 732
R + S D T IW D T K+ E K V +AW+
Sbjct: 206 DGTRLATCSMDKTVRIW------------DPET----GKQVGSELKGHAKWVQGIAWEPL 249
Query: 733 DRWV-----ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR-VLLSAGHD 786
W + + + +F +IW G VL GH V + + V+ +A HD
Sbjct: 250 HLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHD 309
Query: 787 GLIIIWD 793
+ +WD
Sbjct: 310 KTVKVWD 316
Score = 134 (52.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 474 GHLSAVFCVLFDKLGEV-IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH + C F + TG+ D ++W A G TL+G +G + ++
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 533 LAAGTVDKTIRIWNLQTLAPI-SVLVGHQGIITGVNFCPLEV--NGFNYLASTSTDGCIG 589
LA ++DKT+RIW+ +T + S L GH + G+ + PL + +G L S S D
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTAR 269
Query: 590 FW 591
W
Sbjct: 270 IW 271
Score = 102 (41.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
D +I + ++ K+W+A +G + L+GH V+ S DSR+L++A D + +W
Sbjct: 424 DGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQC-SFSADSRLLVTASKDTTLKVW 482
Query: 793 DILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDG 826
++ + K + G E ++ WSPDG
Sbjct: 483 NVRTGK------LATDLPGH-EDEVYGVDWSPDG 509
Score = 89 (36.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT-LRGCSGEISDIAIDNRNIL 532
GH V V + G + T + D +++W GK + + L+G + + IA + ++
Sbjct: 193 GHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLW 252
Query: 533 ------LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
L + + D T RIW + T VL GH+G ++ V + NG + + S D
Sbjct: 253 RDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGA--GNGTGVVYTASHDK 310
Query: 587 CIGFW 591
+ W
Sbjct: 311 TVKVW 315
Score = 84 (34.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V ++ A R ++TA + +K+W+ G L L GH +EV+ ++ P RV S
Sbjct: 458 VYQCSFSADSRLLVTASK-DTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVG-SG 515
Query: 784 GHDGLIIIW 792
G D + +W
Sbjct: 516 GRDKAVRLW 524
Score = 73 (30.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 23/81 (28%), Positives = 34/81 (41%)
Query: 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSI 669
F +R A + SFS L T S D ++V+ + L ++ H D+V +
Sbjct: 447 FINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVR--TGKLAT-DLPGHEDEVYGV 503
Query: 670 QWSHSHLRFVSGSRDGTALIW 690
WS R SG RD +W
Sbjct: 504 DWSPDGQRVGSGGRDKAVRLW 524
Score = 50 (22.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+FSP G +A+ D+ +++ + D I + H V +S V+ S+D
Sbjct: 420 TFSPDGSMIASAGWDNATKLW--NARDGKF-INTLRGHVAPVYQCSFSADSRLLVTASKD 476
Query: 685 GTALIW 690
T +W
Sbjct: 477 TTLKVW 482
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 74/313 (23%), Positives = 136/313 (43%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ Y GH S V V+F + VIV+ ++D IK+W G TL+G + + DI+ D
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFD 159
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
+ LLA+ + D TI++W+ Q I + GH ++ V P NG +++ S S D
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG-DHIVSASRDKT 215
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
I W+ + H + +RP G +A+ S D VRV+ +
Sbjct: 216 IKMWEVATGYCVKTFTGHREWV--RMVRPNQ----------DGTLIASSSNDQTVRVWVV 263
Query: 648 DGVDSPLGILEVEEHSDKVD-SIQWSHSHLRFVSGS---RDGTALIWYYKCSQWRFIRL- 702
+ + E E + + + + +H + +GS + G + S+ + I++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 703 DMNT--CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVL 760
D++ CL T D + + V +++++ + + ++IWD N + L
Sbjct: 324 DVSIGMCLM-TLVGHDNWVRGVLV-----HPGGKYIVSCAD-DKTLRIWDYKNKRCTKTL 376
Query: 761 KGHTNEVFVLESH 773
H + V L+ H
Sbjct: 377 SAHEHFVTSLDFH 389
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 73/327 (22%), Positives = 143/327 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH +++ V+F + ++V+ ++D I++W G+ +L+G + + D+A D + LL
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 534 AAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
A+ + D +I++W+ Q + I + GH ++ V F P G +Y+ S S D I W+
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPA---G-DYVLSASRDRTIKMWE 221
Query: 593 YKLDIDISKTVFHEPVMFNERIR-PGNAHILCSSFSPGGLFLATGSGDHHVRV----YKM 647
+ H + R+ G+ CS+ ++L T S D V + + +
Sbjct: 222 VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL-TNSKDCKVELRDHEHTV 280
Query: 648 DGVD-SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNT 706
+ + +P + D+ + H SGSRD T IW + +
Sbjct: 281 ECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIW----------DVSVGL 330
Query: 707 CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNE 766
CL T D V +A+ +++++A + + I++WD N ++ L H +
Sbjct: 331 CLL-TLSGHDNW-----VRGLAFHPGGKYLVSASD-DKTIRVWDLRNKRCMKTLYAHQHF 383
Query: 767 VFVLESHPFDSRVLLSAGHDGLIIIWD 793
++ H V+ S D + +W+
Sbjct: 384 CTSIDFHKAHPYVI-SGSVDQTVKVWE 409
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 71/291 (24%), Positives = 116/291 (39%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
+L G I+ + L+ + + D TIRIW+ +T L GH + V F +
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAF---D 159
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS-SFSPGGL 631
G LAS S D I W ++ + KT+ H G+ H + S +F P G
Sbjct: 160 AQG-KLLASCSADLSIKLWDFQQSYECIKTM-H-----------GHDHNVSSVAFVPAGD 206
Query: 632 FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 691
++ + S D R KM V + + H + V ++ F + S D T +W
Sbjct: 207 YVLSASRD---RTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL 263
Query: 692 YKCSQWRF-IRLDMNT--CLPHTKETSDET-NKKIKVTMVAWDASDRWVITAINFNFQIK 747
+ +R +T C+ E + N+ ++ + + I+
Sbjct: 264 TNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSR-DKTIR 322
Query: 748 IWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798
IWD G + L GH N V L HP + L+SA D I +WD+ + +
Sbjct: 323 IWDVSVGLCLLTLSGHDNWVRGLAFHP-GGKYLVSASDDKTIRVWDLRNKR 372
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 146 (56.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 48/172 (27%), Positives = 75/172 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V+ V +G+ D +LW L G ++ + + L
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A G+ DKT+R+W+ Q + + GH+G + ++F P NG YLAS D + W
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSP---NG-KYLASAGEDQRLKLW-- 495
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
D+ S T+F E +R I +FSP +A+ S D+ VRV+
Sbjct: 496 --DL-ASGTLFKE-------LRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 143 (55.4 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V+ F +++ ++D+ I+ W +G + + D+ I ++
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYF 399
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D+T R+W+ P+ + GH + V F P N NYLA+ STD + W
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHP---NS-NYLATGSTDKTVRLWSA 455
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
+ + +F P +L SFSP G +LA+ D ++++ +
Sbjct: 456 QQGNSVR--------LFTGHRGP----VLSLSFSPNGKYLASAGEDQRLKLWDL 497
Score = 102 (41.0 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 797
++K+WD +G L + L+GHT+ + L P DS ++ SA D + +WDI S+
Sbjct: 491 RLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRST 542
Score = 81 (33.6 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 39/150 (26%), Positives = 60/150 (40%)
Query: 553 ISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE 612
+ +L GH G + F + +G L S S D I +W D+ F V++
Sbjct: 335 MKILRGHCGPVYSTRFLA-DSSG---LLSCSEDMSIRYW------DLGS--FTNTVLYQG 382
Query: 613 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS 672
P + SP L+ A+GS D R++ D PL I H VD +++
Sbjct: 383 HAYP----VWDVDISPFSLYFASGSHDRTARLWSFDRT-YPLRIYA--GHLADVDCVKFH 435
Query: 673 HSHLRFVSGSRDGTALIWYYKCSQWRFIRL 702
+ +GS D T +W Q +RL
Sbjct: 436 PNSNYLATGSTDKTVRLW--SAQQGNSVRL 463
Score = 47 (21.6 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 522 SDIAIDNRNILLAAGTVDKTIRIWNLQT 549
++I+ D++ LLAAG + I++W+L++
Sbjct: 274 AEISSDSK--LLAAGFDNSCIKLWSLRS 299
Score = 38 (18.4 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 293 LMSAMETERLTRLDQELMLLIIKYLEKGPCHEAAKVLTDLVEAKNLLPERYDWE-GATHS 351
L + ++ + + RL ++ +I+YL+ KVL + +R D++ A+
Sbjct: 155 LRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLAVHIHLDVQPAKRTDYQLYASGG 214
Query: 352 QTLAEVASSHP 362
+ E +S P
Sbjct: 215 SSRTENSSLEP 225
>UNIPROTKB|E2QSZ4 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
Ensembl:ENSCAFT00000027104 Uniprot:E2QSZ4
Length = 1872
Score = 154 (59.3 bits), Expect = 4.4e-10, Sum P(5) = 4.4e-10
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++I+PMDL TIR+ + Y+S F+ DV
Sbjct: 1515 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNL 1574
Query: 1600 VFHNSRNYNQNKRSKIYIMTTR---------LSEFAEEHLRRL 1633
+ NS YN S+ Y T + L+E+ +EHL +L
Sbjct: 1575 ILANSVKYNVGPESQ-YTKTAQEIVNVCYQTLTEY-DEHLTQL 1615
Score = 154 (59.3 bits), Expect = 0.00054, Sum P(4) = 0.00054
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K++I+PMDL TIR+ + Y+S F+ DV
Sbjct: 1515 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNL 1574
Query: 185 VFHNSRNYNQNKRSKIYIMTTR---------LSEFAEEHLRRL 218
+ NS YN S+ Y T + L+E+ +EHL +L
Sbjct: 1575 ILANSVKYNVGPESQ-YTKTAQEIVNVCYQTLTEY-DEHLTQL 1615
Score = 122 (48.0 bits), Expect = 4.4e-10, Sum P(5) = 4.4e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1400 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1459
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1460 NGPKHSLTQISQSML-DLCDEKLK 1482
Score = 66 (28.3 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1380 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1439
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1440 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1483
Score = 51 (23.0 bits), Expect = 0.00054, Sum P(4) = 0.00054
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1427 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1483
Score = 44 (20.5 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD L L
Sbjct: 442 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEELVYGRWEDNIIWDAQAMPRL----L 495
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 496 EPPVLTLDPNDENLILEI-PDEKEE 519
Score = 43 (20.2 bits), Expect = 7.5e-05, Sum P(6) = 7.5e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 668 PQDLTGKDGDLILAEYSEENGPLMMQV 694
Score = 43 (20.2 bits), Expect = 7.5e-05, Sum P(6) = 7.5e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S + N +D
Sbjct: 1096 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSAASGNNHRD 1147
Score = 42 (19.8 bits), Expect = 4.4e-10, Sum P(5) = 4.4e-10
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+ Q+ ED GD A E Q P
Sbjct: 1684 KQVTQEGEDADGDLADEEEGSMQQP 1708
Score = 39 (18.8 bits), Expect = 4.4e-10, Sum P(5) = 4.4e-10
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
DP PGP T + T+ E + S + + PE T++
Sbjct: 1636 DPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVL-DIPTATPEKQVTQE 1689
Score = 38 (18.4 bits), Expect = 4.4e-10, Sum P(5) = 4.4e-10
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 545 TGVIKEEPQQNMSQPEVKDPWNLSND 570
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(6) = 0.00021
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQE 308
V S E+LS S ++DF+ E E L + + +L+R +E
Sbjct: 1076 VLSSTEILSTDTDSSSAEDSDFE-----EMGKNIENMLQNKKTSSQLSREREE 1123
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 180 (68.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 82/343 (23%), Positives = 143/343 (41%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID 527
+ ++ GH + + V F ++V+ ++D IK+W G+ TL+G + + DI D
Sbjct: 98 EKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD 157
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
LLA+ + D TI++W+ QT + L GH ++ V F P +G + L S+S D
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTP---SG-DQLISSSRDKT 213
Query: 588 IGFWKYKLDIDISKTVFHEPVMFNERI-RPGNAHILCSSFSP-------GGLFLATGSGD 639
I W+ I V HE + + G+ CS+ G LAT
Sbjct: 214 IKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREH 273
Query: 640 HHV---RVYKMDGV-DSPLGILEVEEHSDKVDSIQWSH--SHLRFVS-GSRDGTALIWYY 692
HV + + D P +L E KV + +++ GSRD T IW
Sbjct: 274 SHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIW-- 331
Query: 693 KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752
L CL T D V V + +++++ + + I++WD
Sbjct: 332 --------ELATGRCLA-TYIGHDNW-----VRAVRFHPCGKFLLS-VGDDKTIRVWDIA 376
Query: 753 NGDLVQVL-KGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
G ++ + + HT+ + L+ + + + G D +I +W +
Sbjct: 377 QGRCIKTINEAHTHFISCLDFCLHNPHIA-TGGVDDVIKVWKL 418
Score = 143 (55.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 76/309 (24%), Positives = 124/309 (40%)
Query: 504 RARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGII 563
R + +L R C I+ + L+ + + D TI++W+ ++ L GH +
Sbjct: 95 RPPEKHILTGHRNC---INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 564 TGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH-IL 622
++F + G N LAS S D I W ++ D KT+ H G+ H +
Sbjct: 152 QDIDF---DKTG-NLLASCSADLTIKLWDFQT-YDCVKTL-H-----------GHDHNVS 194
Query: 623 CSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGS 682
C F+P G L + S D ++V++ + I + H D V I S S S
Sbjct: 195 CVRFTPSGDQLISSSRDKTIKVWE---AATGYCIKTLVGHEDWVRKITVSEDGSCIASCS 251
Query: 683 RDGTALIWYY---KC-SQWR----FIR-LDMNTC----LPHTKETSDETNKKIKVTMVAW 729
D T W +C + +R + L +T +P + ++ E K+K
Sbjct: 252 NDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGN 311
Query: 730 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 789
+ + + IKIW+ G + GH N V + HP + LLS G D I
Sbjct: 312 LVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC-GKFLLSVGDDKTI 370
Query: 790 IIWDILSSK 798
+WDI +
Sbjct: 371 RVWDIAQGR 379
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 152 (58.6 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 75/340 (22%), Positives = 138/340 (40%)
Query: 324 EAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPK----ICQRLGPL 379
+ ++ T ++ NL PE D E + + E+ ++ P +T+S + + IC+ +
Sbjct: 21 KGGQLRTKCIDLLNLTPET-DVE-----ELVLEIRAAEPLITSSCVEQVKLLICKLQEKV 74
Query: 380 LDKELKPNFPXXXXXXXXXXXXXXXXEKSLAKSVLSSYDYIARQHGTSLLVP-NSVKVHN 438
K+ + + KS + + SYD + T+ ++++ H
Sbjct: 75 GQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHR 134
Query: 439 TVNVLRSREYSGPLSRSLMISSH-KYSNL------RQHYVNLGHLSAVFCVLFDKLGEVI 491
NV+ + ++ P + S K L + Y GH + + C+ F+ ++
Sbjct: 135 --NVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLV 192
Query: 492 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 551
TG+ D KLW G+ ++TL G EI + + L G+ D T +W++ +
Sbjct: 193 ATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGR 252
Query: 552 PISVLVGHQGIITGVNF---CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV 608
+ VL GH+G I+ V F C L +A+ S D W + ++ + H
Sbjct: 253 KVHVLSGHRGEISCVQFNWDCSL-------IATASLDKSCKVWDAEGGQCLATLLGH--- 302
Query: 609 MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
N +L F+ G +AT S D RV+ D
Sbjct: 303 ---------NDEVLDVCFNYTGQLIATASADGTSRVFSTD 333
Score = 144 (55.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 50/179 (27%), Positives = 80/179 (44%)
Query: 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
R+ +V GH + CV F+ +I T + D K+W A G+ LATL G + E+ D+
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCF 311
Query: 527 DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
+ L+A + D T R+++ T + L GH+G I+ V F G L + S D
Sbjct: 312 NYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCF---NAQGSRVLTA-SVDK 367
Query: 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
W K + H +F+ C+ F+ G + TGS D+ R++
Sbjct: 368 TSRVWCVKTGACLQVLEGHSDEIFS-----------CA-FNYEGDTIITGSKDNTCRIW 414
Score = 78 (32.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 721 KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 780
K +++ V ++A V+TA + + ++W G +QVL+GH++E+F + ++ +
Sbjct: 345 KGEISKVCFNAQGSRVLTA-SVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN-YEGDTI 402
Query: 781 LSAGHDGLIIIW 792
++ D IW
Sbjct: 403 ITGSKDNTCRIW 414
Score = 71 (30.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 618 NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLR 677
N +L F+ G +AT S D RV+ D + ++E H ++ + ++ R
Sbjct: 303 NDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQC---LCQLEGHKGEISKVCFNAQGSR 359
Query: 678 FVSGSRDGTALIWYYK 693
++ S D T+ +W K
Sbjct: 360 VLTASVDKTSRVWCVK 375
Score = 69 (29.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDG 685
F+ G + T S D RV+ + + L +LE HSD++ S +++ ++GS+D
Sbjct: 353 FNAQGSRVLTASVDKTSRVWCVK-TGACLQVLE--GHSDEIFSCAFNYEGDTIITGSKDN 409
Query: 686 TALIWY 691
T IW+
Sbjct: 410 TCRIWH 415
>FB|FBgn0010355 [details] [associations]
symbol:Taf1 "TBP-associated factor 1" species:7227
"Drosophila melanogaster" [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS;NAS;IDA;IPI] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0001129 "TBP-class protein binding RNA polymerase II
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=ISS] [GO:0004672 "protein
kinase activity" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0006461 "protein complex assembly" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0051726 "regulation of cell cycle" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0035174 "histone serine kinase
activity" evidence=IDA] [GO:0000117 "regulation of transcription
involved in G2/M-phase of mitotic cell cycle" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046425 "regulation of
JAK-STAT cascade" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001878
InterPro:IPR011177 InterPro:IPR017956 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 SMART:SM00343 SMART:SM00384 EMBL:AE014297
GO:GO:0005524 GO:GO:0022008 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0016573 GO:GO:0035174 EMBL:AE001572
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000117 GO:GO:0046425 GO:GO:0005669
GO:GO:0060261 GO:GO:0001129 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 EMBL:S61883 EMBL:BT004888 PIR:A47371
RefSeq:NP_476956.3 RefSeq:NP_996159.1 RefSeq:NP_996160.1
UniGene:Dm.7380 PDB:1TBA PDBsum:1TBA DisProt:DP00081
ProteinModelPortal:P51123 SMR:P51123 DIP:DIP-228N IntAct:P51123
MINT:MINT-788336 STRING:P51123 PaxDb:P51123
EnsemblMetazoa:FBtr0081685 GeneID:40813 KEGG:dme:Dmel_CG17603
CTD:6872 FlyBase:FBgn0010355 GeneTree:ENSGT00390000012659
InParanoid:P51123 OrthoDB:EOG4HHMH6 PhylomeDB:P51123
EvolutionaryTrace:P51123 GenomeRNAi:40813 NextBio:820715
Bgee:P51123 GermOnline:CG17603 Uniprot:P51123
Length = 2129
Score = 126 (49.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
PD PF PV PDY ++V PMDL T+RE +R Y S F++D+K++ NS Y
Sbjct: 1490 PDVSPFLFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIY 1549
Query: 193 N 193
N
Sbjct: 1550 N 1550
Score = 122 (48.0 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 1548 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 1607
P+S PF KPV+K DY ++ PMDL TI + + Y S +++ D++ + N Y
Sbjct: 1612 PESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIELIATNCEQY 1671
Query: 1608 NQN-----KRSK--IYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKDS 1649
N + K SK + T+L EF+E H +L N K +E +++
Sbjct: 1672 NGSDTRYTKFSKKILEYAQTQLIEFSE-HCGQLEN--NIAKTQERAREN 1717
Score = 69 (29.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 1384 EVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAA 1443
++ L + PFL PV+ Q DL T+ + Y D+ +A
Sbjct: 1607 QIKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIELIAT 1666
Query: 1444 NAEKFNEPHSNIVKYARIITD 1464
N E++N + K+++ I +
Sbjct: 1667 NCEQYNGSDTRYTKFSKKILE 1687
>UNIPROTKB|Q8IZX4 [details] [associations]
symbol:TAF1L "Transcription initiation factor TFIID subunit
1-like" species:9606 "Homo sapiens" [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007140 "male meiosis" evidence=IEP] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0070577 "histone acetyl-lysine
binding" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=ISS] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0045893 GO:GO:0003677 GO:GO:0004674 GO:GO:0006352
GO:GO:0006357 GO:GO:0007140 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0004402 GO:GO:0005669 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 EMBL:AF390562 IPI:IPI00100867 RefSeq:NP_722516.1
UniGene:Hs.591086 PDB:3HMH PDBsum:3HMH ProteinModelPortal:Q8IZX4
SMR:Q8IZX4 IntAct:Q8IZX4 STRING:Q8IZX4 PhosphoSite:Q8IZX4
DMDM:57013082 PaxDb:Q8IZX4 PRIDE:Q8IZX4 Ensembl:ENST00000242310
GeneID:138474 KEGG:hsa:138474 UCSC:uc003zrg.1 CTD:138474
GeneCards:GC09M032619 H-InvDB:HIX0169078 HGNC:HGNC:18056 MIM:607798
neXtProt:NX_Q8IZX4 PharmGKB:PA134947802 HOGENOM:HOG000020066
HOVERGEN:HBG050223 InParanoid:Q8IZX4 OMA:VIREEPQ OrthoDB:EOG4K3KVC
PhylomeDB:Q8IZX4 EvolutionaryTrace:Q8IZX4 GenomeRNAi:138474
NextBio:83796 CleanEx:HS_TAF1L Genevestigator:Q8IZX4
GermOnline:ENSG00000122728 Uniprot:Q8IZX4
Length = 1826
Score = 143 (55.4 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 35/101 (34%), Positives = 57/101 (56%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K+++ P+DL TIR+ + Y+S F+ DV
Sbjct: 1534 VTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNL 1593
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + I ++E+ +EHL +L
Sbjct: 1594 ILANSVKYNGPESQYTKTAQEIVNICYQTITEY-DEHLTQL 1633
Score = 123 (48.4 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1419 PNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATY 1478
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1479 NGPKHSLTQISQSML-DLCDEKLK 1501
Score = 82 (33.9 bits), Expect = 0.00059, Sum P(4) = 0.00059
Identities = 26/97 (26%), Positives = 43/97 (44%)
Query: 1376 EKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQ 1435
+ I+T +++M + + PF PV+ DL T+R Y+ S
Sbjct: 1531 DNIVT--QKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFL 1588
Query: 1436 FDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
DV + AN+ K+N P S K A+ I ++ + I E
Sbjct: 1589 DDVNLILANSVKYNGPESQYTKTAQEIVNICYQTITE 1625
Score = 64 (27.6 bits), Expect = 0.00044, Sum P(5) = 0.00043
Identities = 29/140 (20%), Positives = 52/140 (37%)
Query: 1333 PPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLEEVMGLSVAE 1392
PPK+ + G ++ + I H R + P + E II + + L
Sbjct: 1370 PPKKKRRV---GTTVHCDYLNIPHKSIHRRRTD-PMVTLSSILESIINDMRD---LPNTH 1422
Query: 1393 PFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPH 1452
PF PV+ DL TLR + Y + + + N+ +N P
Sbjct: 1423 PFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPK 1482
Query: 1453 SNIVKYARIITDLLLRIIKE 1472
++ + ++ + DL +KE
Sbjct: 1483 HSLTQISQSMLDLCDEKLKE 1502
Score = 43 (20.2 bits), Expect = 0.00044, Sum P(5) = 0.00043
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 687 PQDLTGKDGDLILAEYSEENGPLMMQV 713
Score = 41 (19.5 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V R + ++ M+Q ++K P+N N+
Sbjct: 564 TGVIREEPQQNMSQPEVKDPWNLSND 589
Score = 40 (19.1 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 10/38 (26%), Positives = 13/38 (34%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESAS 1784
DP PGP TS + T+ E + S
Sbjct: 1654 DPMTPGPYTSQPPDMYDTNTSLSTSRDASVFQDESNLS 1691
>ASPGD|ASPL0000050693 [details] [associations]
symbol:AN1984 species:162425 "Emericella nidulans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0001047 "core promoter
binding" evidence=IEA] [GO:0001094 "TFIID-class transcription
factor binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IEA] [GO:0090054 "regulation of chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0031452 "negative
regulation of heterochromatin assembly" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0009301 "snRNA
transcription" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:1900051 "positive regulation of histone exchange"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 EMBL:BN001307
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 KO:K11684 OrthoDB:EOG44TSHM OMA:QETEIEL
EMBL:AACD01000030 RefSeq:XP_659588.1 ProteinModelPortal:Q5BBU6
STRING:Q5BBU6 EnsemblFungi:CADANIAT00008646 GeneID:2875085
KEGG:ani:AN1984.2 HOGENOM:HOG000190752 Uniprot:Q5BBU6
Length = 808
Score = 136 (52.9 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 36/106 (33%), Positives = 53/106 (50%)
Query: 1525 KKLKRPFNWKNE-CREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIAPMDLGTI 1578
K K+ F W+ + CREVL+ L PF PVD L+ P Y I+ PMDL T+
Sbjct: 447 KPKKKKFQWELKFCREVLDELHKTKHYSYAFPFYYPVDPVALNIPTYHSIIKKPMDLSTV 506
Query: 1579 REELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
+L YE+ +F D++++ N +N K IY+ +L E
Sbjct: 507 SSKLNTGQYENAKEFEMDIRQIMKNCFKFNL-KGDPIYMAGEKLEE 551
Score = 102 (41.0 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 124 EVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKD 181
+ +++L D+ +++PVD K+ P Y ++ PMDLGTI ++L+ + Y SP D
Sbjct: 268 KAIQSLKRLHDARFYKEPVDPVKMAIPTYFDVIKEPMDLGTIEQKLKNNVYTSPQSVFND 327
Query: 182 VKRVFHNSRNYN 193
+ + N+ +N
Sbjct: 328 FELMVRNAHVFN 339
Score = 52 (23.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 1415 DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEP-HSNIVKYARIITDLLLRIIKEP 1473
DL T+ + +N Y S D + NA FN P H V+ R+ +++ P
Sbjct: 305 DLGTIEQKLKNNVYTSPQSVFNDFELMVRNAHVFNGPDHIVSVEGKRLQATFEKQMLNLP 364
Query: 1474 NPVDV 1478
+V
Sbjct: 365 KADEV 369
>ASPGD|ASPL0000040628 [details] [associations]
symbol:AN2997 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016282
"eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
"eukaryotic translation initiation factor 3 complex, eIF3m"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003743 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
OMA:ATVAGWS RefSeq:XP_660601.1 ProteinModelPortal:Q5B8Y3
STRING:Q5B8Y3 EnsemblFungi:CADANIAT00010083 GeneID:2874320
KEGG:ani:AN2997.2 OrthoDB:EOG44QX8Q Uniprot:Q5B8Y3
Length = 336
Score = 176 (67.0 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 74/319 (23%), Positives = 137/319 (42%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH ++ + F++ G+++ + A D ++ W + +G+ L T G G I + + +LL
Sbjct: 8 GHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHLGAIWTVDVSPNTVLL 67
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD-GCIGFWK 592
A G+ D ++R+WN++T + V + V F P +G LA T G +G
Sbjct: 68 ATGSADNSVRLWNVKTGECVKVWE-FPTAVKRVEFSP---DGSKVLAVTEKRMGFLGTIA 123
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
LDI+ ++ + RI + + +S G ++ G D V Y
Sbjct: 124 V-LDINYDGDFTNQAEEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDAK-TGE 181
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK 712
L ++ E +++ +Q+S F++ S+D +A K R + + + T + T
Sbjct: 182 QLENVQAHEFDHQINDLQFSPDRTHFLTASKDKSA-----KLMSSRNLAI-LKTYVADTP 235
Query: 713 ETSDE-TNKKIKVTMVAWDAS-DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVL 770
S T KK V + A+ D +A F+ + + D + +KGH + +
Sbjct: 236 LNSAAITPKKEYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVKGHFGPLNTI 295
Query: 771 ESHPFDSRVLLSAGHDGLI 789
HP + S G DG +
Sbjct: 296 HVHPAGT-AYASGGEDGYV 313
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 180 (68.4 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 87/372 (23%), Positives = 155/372 (41%)
Query: 474 GHLSAVFCVLFDKLGE-VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH A+ F + +V+G+ D ++W G L TL+G + + ++ +
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAM 205
Query: 533 LAAGTVDKTIRIWNLQTLAPISV-LVGHQGIITGVNFCP--LEVNGFNYLASTSTDGCIG 589
+A G++D T+RIW+ + + L GH IT + + P L+ +G LAS S D +
Sbjct: 206 IATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVR 265
Query: 590 FWKY---KLDIDISKTVFHEPVMFNERIRPGNAHILCSSF--------SPGGLFLATGSG 638
W + DI +S H+ + R G I SS S G + T S
Sbjct: 266 IWDVISKRADIVLSG---HKGSVTCVRWG-GTGKIYTSSHDRTIKVWNSQTGTLIQTLSA 321
Query: 639 DHHVRVYKMD-GVDSPLGILEVEEHSDKV---DSIQWSHSHLRFVSGSRDGTALIWYYKC 694
H RV + D L +H+ KV D+ + + + RF + ++
Sbjct: 322 HAH-RVNHLALSTDFILRTA-YHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLVS 379
Query: 695 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 754
+ F + +K + + +V V + + D I + F+ +K+W+ +G
Sbjct: 380 ASDDFTMYLWDP-ESSSKPVARLLGHQKEVNHVTF-SPDMAYIASAGFDNHVKLWNGRDG 437
Query: 755 DLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGE 814
+ L+GH V+ DSR+L+S+ D + +W++ + K + G +
Sbjct: 438 KFITTLRGHVGAVYQC-CFSADSRLLVSSSKDTTLKVWNVRTGK------LSEDLPGHKD 490
Query: 815 GALFDGKWSPDG 826
+F WSPDG
Sbjct: 491 -EVFAVDWSPDG 501
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
LGH V V F I + D +KLW RDGK + TLRG G + + L
Sbjct: 402 LGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRL 461
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
L + + D T+++WN++T L GH+ + V++ P +G + S D I W+
Sbjct: 462 LVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSP---DG-QKVGSGGKDKAIRIWR 517
>UNIPROTKB|Q5IH81 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9986 "Oryctolagus cuniculus" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:AY727926 RefSeq:NP_001075647.1
UniGene:Ocu.6213 ProteinModelPortal:Q5IH81 STRING:Q5IH81
PRIDE:Q5IH81 GeneID:100008959 Uniprot:Q5IH81
Length = 333
Score = 175 (66.7 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 75/325 (23%), Positives = 147/325 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW-YYKCSQWRFIRLDMNTC 707
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + R +
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSREMTMFVTASKDNTAKLFDSTTLEHQKTFRTE---- 229
Query: 708 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNE 766
P + + N + V +A D + F+ + + AF + +V KGH
Sbjct: 230 -PPRELAALSPNYEHVVVGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGP 287
Query: 767 VFVLESHPFDSRVLLSAGHDGLIII 791
+ + HP D + S G DG + I
Sbjct: 288 INSVAFHP-DGKSYSSGGEDGYVRI 311
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 86/316 (27%), Positives = 136/316 (43%)
Query: 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL------------RGCSG 519
+L H S V CV F + G+ I TG + +++ G+L+A L SG
Sbjct: 196 SLDHSSVVCCVRFSRDGKFIATGCNKTT-QVFNVTTGELVAKLIDESSNENKDDNTTASG 254
Query: 520 E--ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 577
+ I + LLA G DK IRIW+L T I +L GH+ I ++F P +G +
Sbjct: 255 DLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFP---DG-D 310
Query: 578 YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 637
L S S D + W + S T+ I G + + SP G +A GS
Sbjct: 311 RLVSGSGDRSVRIWDLRTS-QCSLTL---------SIEDG---VTTVAVSPDGKLIAAGS 357
Query: 638 GDHHVRVYK------MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 691
D VRV+ ++ +DS G H D V S+ +S++ + SGS D T +W+
Sbjct: 358 LDRTVRVWDSTTGFLVERLDS--GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Query: 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA 751
+ + +TC E + +K V V + ++++ I WD
Sbjct: 416 LEGKSDK-----KSTC-----EVTYIGHKDF-VLSVCCTPDNEYILSGSKDRGVI-FWDQ 463
Query: 752 FNGDLVQVLKGHTNEV 767
+G+ + +L+GH N V
Sbjct: 464 ASGNPLLMLQGHRNSV 479
Score = 136 (52.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 57/229 (24%), Positives = 100/229 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH ++ + F G+ +V+G+ D +++W R + TL G ++ +A+ L+
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLI 353
Query: 534 AAGTVDKTIRIWNLQTLAPISVLV-------GHQGIITGVNFCPLEVNGFNYLASTSTDG 586
AAG++D+T+R+W+ T + L GH+ + V F NG +AS S D
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN---NG-EQIASGSLDR 409
Query: 587 CIGFWKYKLDIDISKT-----VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 641
+ W + D T + H+ + + P N +IL S G +F SG+
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP- 468
Query: 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ + G + + + V +S + I F +GS D A IW
Sbjct: 469 --LLMLQGHRNSVISVAVSLNSKGTEGI--------FATGSGDCKARIW 507
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 86/316 (27%), Positives = 136/316 (43%)
Query: 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL------------RGCSG 519
+L H S V CV F + G+ I TG + +++ G+L+A L SG
Sbjct: 196 SLDHSSVVCCVRFSRDGKFIATGCNKTT-QVFNVTTGELVAKLIDESSNENKDDNTTASG 254
Query: 520 E--ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 577
+ I + LLA G DK IRIW+L T I +L GH+ I ++F P +G +
Sbjct: 255 DLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFP---DG-D 310
Query: 578 YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGS 637
L S S D + W + S T+ I G + + SP G +A GS
Sbjct: 311 RLVSGSGDRSVRIWDLRTS-QCSLTL---------SIEDG---VTTVAVSPDGKLIAAGS 357
Query: 638 GDHHVRVYK------MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWY 691
D VRV+ ++ +DS G H D V S+ +S++ + SGS D T +W+
Sbjct: 358 LDRTVRVWDSTTGFLVERLDS--GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH 415
Query: 692 YKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDA 751
+ + +TC E + +K V V + ++++ I WD
Sbjct: 416 LEGKSDK-----KSTC-----EVTYIGHKDF-VLSVCCTPDNEYILSGSKDRGVI-FWDQ 463
Query: 752 FNGDLVQVLKGHTNEV 767
+G+ + +L+GH N V
Sbjct: 464 ASGNPLLMLQGHRNSV 479
Score = 136 (52.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 57/229 (24%), Positives = 100/229 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH ++ + F G+ +V+G+ D +++W R + TL G ++ +A+ L+
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLI 353
Query: 534 AAGTVDKTIRIWNLQTLAPISVLV-------GHQGIITGVNFCPLEVNGFNYLASTSTDG 586
AAG++D+T+R+W+ T + L GH+ + V F NG +AS S D
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN---NG-EQIASGSLDR 409
Query: 587 CIGFWKYKLDIDISKT-----VFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 641
+ W + D T + H+ + + P N +IL S G +F SG+
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP- 468
Query: 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ + G + + + V +S + I F +GS D A IW
Sbjct: 469 --LLMLQGHRNSVISVAVSLNSKGTEGI--------FATGSGDCKARIW 507
>UNIPROTKB|Q5E966 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
EMBL:BT021054 EMBL:BC103177 IPI:IPI00692672 RefSeq:NP_001015628.1
UniGene:Bt.37139 ProteinModelPortal:Q5E966 STRING:Q5E966
PRIDE:Q5E966 Ensembl:ENSBTAT00000019134 GeneID:521747
KEGG:bta:521747 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 InParanoid:Q5E966 OMA:ATVAGWS OrthoDB:EOG4HX519
NextBio:20873359 Uniprot:Q5E966
Length = 325
Score = 174 (66.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 76/324 (23%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M RI ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---RIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>ZFIN|ZDB-GENE-030131-5928 [details] [associations]
symbol:brdt "bromodomain, testis-specific"
species:7955 "Danio rerio" [GO:0001207 "histone displacement"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0007140
"male meiosis" evidence=ISS] [GO:0007141 "male meiosis I"
evidence=ISS] [GO:0051039 "positive regulation of transcription
during meiosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
ZFIN:ZDB-GENE-030131-5928 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104261
EMBL:BX927081 Ensembl:ENSDART00000151136 Ensembl:ENSDART00000151422
Uniprot:I3IS77
Length = 1093
Score = 132 (51.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 36/93 (38%), Positives = 49/93 (52%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V + LW S PFR+PVD +L+ PDY I+ PMDL
Sbjct: 20 EFKNPKKPGRLTNHLQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLT 79
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
TIR+ L + Y ++ V+D +F N YN+
Sbjct: 80 TIRKRLENNYYWKAMECVEDFNTMFTNCYVYNR 112
Score = 110 (43.8 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 1537 CREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPI 1591
C +L+ ++ S PF KPVD L DY +I+ PMD+ TI++++ Y +
Sbjct: 276 CNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDAL 335
Query: 1592 DFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
F D++ +F N YN ++ M +L + E
Sbjct: 336 QFAADMRLMFSNCYKYNPPGH-EVVSMARKLQDVFE 370
Score = 110 (43.8 bits), Expect = 0.00046, Sum P(4) = 0.00046
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 122 CREVLETLWVCPDSE---PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPI 176
C +L+ ++ S PF KPVD L DY +I+ PMD+ TI++++ Y +
Sbjct: 276 CNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDAL 335
Query: 177 DFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 212
F D++ +F N YN ++ M +L + E
Sbjct: 336 QFAADMRLMFSNCYKYNPPGH-EVVSMARKLQDVFE 370
Score = 89 (36.4 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 38/158 (24%), Positives = 63/158 (39%)
Query: 1334 PKEGKEATEPGGSLPVEP--EEIQELL-YHPRPDEWPQGDRDATCEKIITGLEEVMGLSV 1390
PK K + G P++P +++ E H +R C I+ + +
Sbjct: 232 PKVLKLFSRRGSGRPIKPPCKDLPESPPQHQVGRRTKLSERLKYCNAILKEMFSKKHSAY 291
Query: 1391 AEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKF 1448
A PF PVD D++T++ + + R Y D+R + +N K+
Sbjct: 292 AWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKY 351
Query: 1449 NEPHSNIVKYARIITDLL-LRIIKEPN-PVDV-PVVYH 1483
N P +V AR + D+ R K P+ P + PV H
Sbjct: 352 NPPGHEVVSMARKLQDVFEFRFSKIPDEPKNANPVSSH 389
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 1393 PFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNE 1450
PF PVD + DLTT+R R +N +Y + D + N +N
Sbjct: 53 PFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNR 112
Query: 1451 PHSNIVKYARIITDLLLRIIKE 1472
P +IV A+++ L L + E
Sbjct: 113 PGDDIVLMAQVLEKLFLEKVAE 134
Score = 80 (33.2 bits), Expect = 0.00046, Sum P(4) = 0.00046
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
LTT+R R +N +Y + D + N +N P +IV A+++ L L + E
Sbjct: 78 LTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAE 134
Score = 48 (22.0 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 889 PPFLVDLNGTPYPPEVQR-LVPGR 911
PP +NG P PPE + PGR
Sbjct: 6 PPQHFTMNGNPPPPEFKNPKKPGR 29
Score = 47 (21.6 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 1782 SASESQEDENSIPE--TDTTEQ 1801
S+SES + E+S PE +DT E+
Sbjct: 401 SSSESSDSESSSPENSSDTEEE 422
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 1785 ESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSEL 1832
+ +E E+S + + ++PAK LK + + E + D+ EM+ L
Sbjct: 466 KKKERESSKRKGEEMKKPAKILKRSSSSKSSGRKESRACDSEEEMNTL 513
Score = 42 (19.8 bits), Expect = 0.00046, Sum P(4) = 0.00046
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 963 TSHVHVLRSRANGESSAAT---EGTSPSGTAPTAQ 994
+SH V + RA SS+ + E +SP ++ T +
Sbjct: 387 SSHNRVKKERARSPSSSESSDSESSSPENSSDTEE 421
Score = 41 (19.5 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 581 STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPG 629
S+S+D C + K SK H + + +R NA + SS + G
Sbjct: 652 SSSSDSCDSDSEQKTKRKQSKGPGHANKIKKKALRQANAEVKDSSSASG 700
>UNIPROTKB|F1PPR0 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006413 "translational initiation"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 GeneTree:ENSGT00630000089849
OMA:ATVAGWS EMBL:AAEX03001657 Ensembl:ENSCAFT00000017014
Uniprot:F1PPR0
Length = 325
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 76/324 (23%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G SG + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHSGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|F1MF62 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045120 "pronucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] InterPro:IPR001487
InterPro:IPR011177 Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006355 GO:GO:0003677
GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0045120 GO:GO:0005669 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 GeneTree:ENSGT00390000012659 OMA:DEFYYPK
EMBL:DAAA02072840 IPI:IPI00715936 Ensembl:ENSBTAT00000061423
ArrayExpress:F1MF62 Uniprot:F1MF62
Length = 1882
Score = 149 (57.5 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 36/103 (34%), Positives = 58/103 (56%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++++PMDL TIR+ + Y+S F+ DV
Sbjct: 1524 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1583
Query: 1600 VFHNSRNYN----QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN +++ +K + + L+E+ +EHL +L
Sbjct: 1584 ILANSVKYNVIGPESQYTKTAQEIVNVCYQTLTEY-DEHLTQL 1625
Score = 122 (48.0 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1409 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1468
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1469 NGPKHSLTQISQSML-DLCDEKLK 1491
Score = 66 (28.3 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1389 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1448
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1449 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1492
Score = 43 (20.2 bits), Expect = 0.00023, Sum P(6) = 0.00023
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 677 PQDLTGKDGDLILAEYSEENGPLMMQV 703
Score = 43 (20.2 bits), Expect = 0.00023, Sum P(6) = 0.00023
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S + N +D
Sbjct: 1105 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMILAAGSAASGNNHRD 1156
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+ Q+ ED GD A E Q P
Sbjct: 1694 KQVTQEGEDADGDLADEEEGTVQQP 1718
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD P L
Sbjct: 451 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEELVYGRWEDNIIWD----AQAMPRFL 504
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 505 EPPILTLDPNDENLILEI-PDEKEE 528
Score = 40 (19.1 bits), Expect = 0.00043, Sum P(6) = 0.00043
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 256 VESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQELMLLII 314
V S E+LS S ++DF+ K S + ER + +EL +I+
Sbjct: 1085 VLSSTEILSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMIL 1143
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
DP PGP T + T+ E + S + + PE T++
Sbjct: 1646 DPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVL-DIPTATPEKQVTQE 1699
Score = 38 (18.4 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 554 TGVIKEEPQQNMSQPEVKDPWNLSND 579
>POMBASE|SPAC631.02 [details] [associations]
symbol:nrc1 "bromodomain protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=ISM] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] InterPro:IPR001487
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
PomBase:SPAC631.02 EMBL:CU329670 GO:GO:0006338 GO:GO:0000790
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 OrthoDB:EOG44TSHM PROSITE:PS51525 EMBL:D89157
PIR:T42517 RefSeq:NP_593620.3 ProteinModelPortal:Q9HGP4
STRING:Q9HGP4 EnsemblFungi:SPAC631.02.1 GeneID:2543426
NextBio:20804439 Uniprot:Q9HGP4
Length = 727
Score = 129 (50.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 134 DSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191
DS PFR PVD K + PDY I+ P+DLGT++++ Y S F+ D+ +F N
Sbjct: 250 DSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFL 309
Query: 192 YNQNKRSKIYIMTTRLSEFAEEHLRRL 218
YN + S + +M L E L++L
Sbjct: 310 YNGTE-SPVGVMGKNLQATFERQLKQL 335
Score = 129 (50.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 1549 DSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 1606
DS PFR PVD K + PDY I+ P+DLGT++++ Y S F+ D+ +F N
Sbjct: 250 DSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFL 309
Query: 1607 YNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
YN + S + +M L E L++L
Sbjct: 310 YNGTE-SPVGVMGKNLQATFERQLKQL 335
Score = 105 (42.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 1552 PFRKPVDKL--DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPV+ PDY K++ PMDLGT++ +L + Y S F D+ +F N +N
Sbjct: 415 PFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFN- 473
Query: 1610 NKRSKIYIMTTRLSEFAEE 1628
+ + +++M +L ++
Sbjct: 474 SAGTPVHLMGKKLESIFQK 492
Score = 64 (27.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/129 (19%), Positives = 45/129 (34%)
Query: 1323 RENLSPWDLEPPKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGL 1382
R P + PK G I+E +Y +P C+ ++ L
Sbjct: 345 RPGRRPRSMTAPKGGARTRRQAAMYSNSSSGIRETMYDLKPHRRKDAAEMKFCQSVLKEL 404
Query: 1383 EEVMGLSVAEPFLVPVDISQXX--XXXXXXXXXXDLTTLRARFQNRFYRRITSAQFDVRY 1440
+ + A PF PV+ + DL T++ + + Y + + + D+
Sbjct: 405 LKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVL 464
Query: 1441 LAANAEKFN 1449
+ N KFN
Sbjct: 465 MFKNCYKFN 473
Score = 51 (23.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 26/111 (23%), Positives = 44/111 (39%)
Query: 898 TPYPPEVQRLVPGRENADDTELLPDITTNDDGHVEIVEGSERNGERPVEVEGQRHYNDHG 957
TP PE + G E ++ P I+ NDDG +++ SE E+ +G D+
Sbjct: 34 TPGSPEPS--MNGEEK--ESSYFP-ISENDDGTLDLFGDSELEKEQ----KGDNQETDYS 84
Query: 958 HVYIQTSHVHVLRSRANGESSAATEGTSPSGTAPTAQNKNFVKRLPLSQHK 1008
Y+ H N + + + T PS + T + L L + +
Sbjct: 85 SQYL-----HPTPPYTNFDDESPSSPTHPSVSNITVDGDSKKHSLQLQEEE 130
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 159 (61.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/197 (24%), Positives = 96/197 (48%)
Query: 452 LSRSLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 510
LS+ ++SH + H ++ G L+ C +++ GAD +I ++ + ++
Sbjct: 20 LSKYRQVASH----VGLHSASIPGILALDLCP--SDTNKILTGGADKNVIVFDKSSE-QI 72
Query: 511 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
LATL+G S +++ + L+ + + D TIRIW++ + + V+ H+G +TG++
Sbjct: 73 LATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLS--- 129
Query: 571 LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGG 630
L G +YL S+S D +W + DI + V+ + C+ F P G
Sbjct: 130 LHATG-DYLLSSSDDQ---YWAFS-DIQTGR------VLTKVTDESSGCALTCAQFHPDG 178
Query: 631 LFLATGSGDHHVRVYKM 647
L TG+ D ++++ +
Sbjct: 179 LIFGTGTMDSQIKIWDL 195
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 131 (51.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 522
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 232 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VL 288
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 579
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 289 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 340
Query: 580 ASTSTDGCIGFW 591
S S D I W
Sbjct: 341 VSASGDRTIKVW 352
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 322 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 377
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 415
Score = 113 (44.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 207 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 262
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 263 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 316
Query: 599 IS 600
I+
Sbjct: 317 IT 318
Score = 98 (39.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 377 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 432
Query: 793 DILSS 797
D++++
Sbjct: 433 DLIAA 437
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 178 (67.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 60/229 (26%), Positives = 105/229 (45%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISD 523
S + YV GH ++ + F G IV+G+ D +LW G+ + L +G ++
Sbjct: 390 STQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTA 448
Query: 524 IAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582
IAI + +A G++D+ IR+W++ TL + L GH+ + + F P + L S
Sbjct: 449 IAISPNDQFIAVGSLDQIIRVWSVSGTL--VERLEGHKESVYSIAFSP----DSSILLSG 502
Query: 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS-SFSPGGLFLATGSGDHH 641
S D I W+ + + + +P + G+ + S + SP + +GS D
Sbjct: 503 SLDKTIKVWELQATRSVGLSAI-KPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRS 561
Query: 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
++ + + S L + H + V S+ +S +F SGS D A IW
Sbjct: 562 MQFWDLQTGQS---YLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
>ZFIN|ZDB-GENE-030131-267 [details] [associations]
symbol:brd4 "bromodomain containing 4" species:7955
"Danio rerio" [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 ZFIN:ZDB-GENE-030131-267
GO:GO:0005634 GO:GO:0042393 GO:GO:0000793 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AL954361 IPI:IPI00882849
Ensembl:ENSDART00000114343 Ensembl:ENSDART00000115117 OMA:NGQPKHF
Uniprot:F1R5H6
Length = 1444
Score = 138 (53.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 96 PTAVTRAQREAMNQKKLKRPFNWKNEC-REVLETLWVCPDSEPFRKPVD--KLDHPDYDK 152
P++ E N + KR N + VL++LW + PF PVD KL+ PDY K
Sbjct: 25 PSSFNPNPPETSNPTRPKRQTNQLQYLLKVVLKSLWKHQFAWPFHAPVDAVKLNLPDYYK 84
Query: 153 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
I+ PMD+GTI++ L Y S + ++D +F N YN+
Sbjct: 85 IIKNPMDMGTIKKRLESAFYTSAQECIQDFNTMFTNCYIYNK 126
Score = 114 (45.2 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 1552 PFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF KPVD L DY I+ PMDL TI+++L Y +F DV+ +F N YN
Sbjct: 385 PFYKPVDVDTLGLHDYHDIIKHPMDLSTIKDKLETRQYREAQEFAADVRLMFSNCYKYNP 444
Query: 1610 NKRSKIYIMTTRLSEFAEEHLRRL 1633
++ M +L + E ++
Sbjct: 445 PDH-EVVAMARKLQDVFEMRFAKM 467
Score = 108 (43.1 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 50/226 (22%), Positives = 85/226 (37%)
Query: 1320 NNERENLSPWDLEPPKE--GKEATEPGGSLPVE--PEEIQELLYHPRPDEWPQGDRDATC 1375
N++ SP + + K ++ T P LP + P+ P Q ++ C
Sbjct: 309 NDQLNESSPAESKSGKTLPRRDNTRPS-KLPKKEAPDSQHHWTAAPGTPSPKQQEQLRYC 367
Query: 1376 EKIITGLEEVMGLSVAEPFLVPVDISQXXXXXXXXXXXX--DLTTLRARFQNRFYRRITS 1433
I+ + + A PF PVD+ DL+T++ + + R YR
Sbjct: 368 SGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMDLSTIKDKLETRQYREAQE 427
Query: 1434 AQFDVRYLAANAEKFNEPHSNIVKYARIITDLL-LRIIKEPN-------PVDVPVVYHEL 1485
DVR + +N K+N P +V AR + D+ +R K P+ P PV++
Sbjct: 428 FAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEMLAPAPAPVLHPAP 487
Query: 1486 LQNY---XXXXXXXXXXXXXXXRQRRVRPTAVTRAQREAMNQKKLK 1528
++ + + RAQR A Q++LK
Sbjct: 488 VKTQPVMATASSSDTSSDSSSESESSTDDSEEERAQRLAELQEQLK 533
Score = 45 (20.9 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 1752 GPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQPAK-KLKVLY 1810
G S A+ ++T +A E +E E ++ EQ K +L+
Sbjct: 1273 GSWASLAQKSSTTPSSGLKSSSDSFEQFRRAAREKEEREKALKAQ--VEQAEKDRLRKEQ 1330
Query: 1811 PKRRGQQSED 1820
K RG+ ED
Sbjct: 1331 EKLRGRDEED 1340
Score = 42 (19.8 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1782 SASESQEDENSIPETDTTEQPAKK 1805
S+SES E+ ET +P K+
Sbjct: 753 SSSESSSSESEDSETGMASKPKKR 776
Score = 39 (18.8 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 1325 NLSPWDLEPPKEGKEATEPGGSLPVEPEEIQE 1356
+L P D PP A P + P IQ+
Sbjct: 246 SLGPTDCNPPAPIITAVPPPTQTALPPVHIQQ 277
>RGD|1560498 [details] [associations]
symbol:Eif3i-ps1 "eukaryotic translation initiation factor 3,
subunit I, pseudogene 1" species:10116 "Rattus norvegicus"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:BC158748 EMBL:BC158821 IPI:IPI00766018
RefSeq:NP_001108507.1 UniGene:Rn.162577 ProteinModelPortal:B0BNA7
STRING:B0BNA7 PhosphoSite:B0BNA7 PRIDE:B0BNA7 GeneID:682390
KEGG:rno:682390 RGD:728910 NextBio:722902 ArrayExpress:B0BNA7
Genevestigator:B0BNA7 Uniprot:B0BNA7
Length = 325
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTSLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 177 (67.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 63/226 (27%), Positives = 105/226 (46%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR----GCSGEISDIAIDNR 529
GH ++ + + G IV+G+ D K+W GK TL G ++ +A+
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
L+AAG++D +R+W+ QT + GH + V F P +G + LAS S D +
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSP---DGKS-LASGSLDKSLK 482
Query: 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 649
W D+ S++ FN +L +FSP G +L +GS D V+ + D
Sbjct: 483 LW----DLSGSRSRSRCRATFNGH----KDFVLSVAFSPDGSWLISGSKDRSVQFW--DP 532
Query: 650 VDSPLGILEVEEHSDKVDSIQWS---HSHLRFVSGSRDGTALIWYY 692
+ ++ ++ H + V S+ S +SH F +GS D + +W Y
Sbjct: 533 RNGTTHMM-LQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKY 577
Score = 160 (61.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 64/226 (28%), Positives = 100/226 (44%)
Query: 472 NLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN--- 528
NL H S V CV F G+ + TG + +++ GK + S + D+ I +
Sbjct: 277 NLQHNSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCF 335
Query: 529 --RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
LA G DKT+++W++ T GH+ I +++ +G ++ S S D
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSS---DG-RFIVSGSGDK 391
Query: 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 646
W DI+ K F + NE + P N + + SP G +A GS D+ VR++
Sbjct: 392 KAKIW----DIEKGKCAF---TLGNEEVGPKNG-VTSVAMSPDGRLVAAGSLDNIVRLW- 442
Query: 647 MDGVDSPLG-ILE-VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
D+ G LE E H D V S+ +S SGS D + +W
Sbjct: 443 ----DAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLW 484
Score = 146 (56.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+G + V V G ++ G+ D +++LW A+ G L G + +A
Sbjct: 412 VGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKS 471
Query: 533 LAAGTVDKTIRIWNLQTLAPIS----VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588
LA+G++DK++++W+L S GH+ + V F P +G ++L S S D +
Sbjct: 472 LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP---DG-SWLISGSKDRSV 527
Query: 589 GFWKYKLDIDISKTVFHEPVMFNERIRP-GNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
FW + H+ + + + P N+H G+F ATGSGD R++K
Sbjct: 528 QFWDPRNGTTHMMLQGHKNSVISVALSPKNNSH---------GVF-ATGSGDFRSRLWKY 577
Query: 648 D 648
D
Sbjct: 578 D 578
Score = 145 (56.1 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541
V F G + TGA+D +K+W K+ T G +I + + + +G+ DK
Sbjct: 333 VCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKK 392
Query: 542 IRIWNLQTLAPISVLVGHQ--GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 599
+IW+++ + +G++ G GV + +G +A+ S D + W
Sbjct: 393 AKIWDIEK-GKCAFTLGNEEVGPKNGVTSVAMSPDG-RLVAAGSLDNIVRLWD------- 443
Query: 600 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 659
++T + F ER + +FSP G LA+GS D ++++ + G S
Sbjct: 444 AQTGY-----FLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRAT 498
Query: 660 -EEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
H D V S+ +S +SGS+D + W
Sbjct: 499 FNGHKDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 128 (50.1 bits), Expect = 0.00037, P = 0.00037
Identities = 64/233 (27%), Positives = 105/233 (45%)
Query: 546 NLQTLAPISVL--VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
++QT I +L + H ++ VNF N YLA+ GC + D+D K V
Sbjct: 265 SVQTNLNIDLLHNLQHNSVVCCVNFS----NDGKYLAT----GCNRSAQI-YDVDTGKKV 315
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS 663
H V +E + G+ +I FSP G +LATG+ D V+V+ D ++ +
Sbjct: 316 -HAFV--DESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVW-----DIHTKKIQHTFYG 367
Query: 664 DKVD--SIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
++D S+ +S VSGS D A IW ++ C T ++E K
Sbjct: 368 HELDIYSLDYSSDGRFIVSGSGDKKAKIW----------DIEKGKCA-FTLG-NEEVGPK 415
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774
VT VA R ++ A + + +++WDA G ++ +GH + V+ + P
Sbjct: 416 NGVTSVAMSPDGR-LVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSP 467
>POMBASE|SPAC1952.05 [details] [associations]
symbol:gcn5 "SAGA complex histone acetyltransferase
catalytic subunit Gcn5" species:4896 "Schizosaccharomyces pombe"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IGI] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=EXP;IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0010484 "H3
histone acetyltransferase activity" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0071276 "cellular
response to cadmium ion" evidence=IMP] [GO:0071585 "detoxification
of cadmium ion" evidence=IMP] InterPro:IPR000182 InterPro:IPR001487
Pfam:PF00439 Pfam:PF13508 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51186 SMART:SM00297 PomBase:SPAC1952.05 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0071276 GO:GO:0071585
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0000124
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0007131 GO:GO:0010484 HOGENOM:HOG000192257
KO:K06062 EMBL:AB162439 PIR:T37933 RefSeq:NP_594807.1
ProteinModelPortal:Q9UUK2 SMR:Q9UUK2 IntAct:Q9UUK2 STRING:Q9UUK2
EnsemblFungi:SPAC1952.05.1 GeneID:2542513 KEGG:spo:SPAC1952.05
OMA:SVWMGYI OrthoDB:EOG412QF2 NextBio:20803566 Uniprot:Q9UUK2
Length = 454
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 42/115 (36%), Positives = 65/115 (56%)
Query: 103 QREAMNQKKLKRPFNWKNECREVLET-LWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLG 161
+ E +++K +PF E+L T + P S PF +PV K D PDY +++ PMDL
Sbjct: 335 EMEELSKKPRPKPFF---AVLEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLS 391
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLR 216
T+ LR + YES +F++D K +F N R+YN + + Y RL +F ++ LR
Sbjct: 392 TMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTT-YYKNADRLEKFFQKKLR 445
Score = 175 (66.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 42/115 (36%), Positives = 65/115 (56%)
Query: 1518 QREAMNQKKLKRPFNWKNECREVLET-LWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLG 1576
+ E +++K +PF E+L T + P S PF +PV K D PDY +++ PMDL
Sbjct: 335 EMEELSKKPRPKPFF---AVLEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLS 391
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLR 1631
T+ LR + YES +F++D K +F N R+YN + + Y RL +F ++ LR
Sbjct: 392 TMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTT-YYKNADRLEKFFQKKLR 445
Score = 40 (19.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 255 LVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETE 300
+ SD + + K T + F P G + +K K + + ++ +
Sbjct: 51 IANSDGQESLAVKENKDTESSSSHFVPNGVSNSKKRKLVATDLDVD 96
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 130 (50.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 522
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 232 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VL 288
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 579
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 289 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 340
Query: 580 ASTSTDGCIGFW 591
S S D I W
Sbjct: 341 VSASGDRTIKVW 352
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 322 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 377
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F + S + DG I
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI------VSGAYDGKIKV 431
Query: 591 WKYKLDID 598
W +D
Sbjct: 432 WDLMAALD 439
Score = 108 (43.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 207 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 262
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 263 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 316
Query: 599 IS 600
I+
Sbjct: 317 IT 318
Score = 98 (39.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 377 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 432
Query: 793 DILSS 797
D++++
Sbjct: 433 DLMAA 437
>UNIPROTKB|Q13347 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9606 "Homo sapiens" [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0003743 "translation
initiation factor activity" evidence=IC;IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 Reactome:REACT_1762 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900 OMA:ATVAGWS
OrthoDB:EOG4HX519 EMBL:U39067 EMBL:U36764 EMBL:BC000413
EMBL:BC003140 IPI:IPI00012795 PIR:S60335 RefSeq:NP_003748.1
UniGene:Hs.530096 ProteinModelPortal:Q13347 SMR:Q13347
DIP:DIP-31116N IntAct:Q13347 MINT:MINT-5004513 STRING:Q13347
PhosphoSite:Q13347 DMDM:2494895 DOSAC-COBS-2DPAGE:Q13347 OGP:Q13347
PaxDb:Q13347 PeptideAtlas:Q13347 PRIDE:Q13347 DNASU:8668
Ensembl:ENST00000373586 GeneID:8668 KEGG:hsa:8668 UCSC:uc001bur.4
GeneCards:GC01P032687 HGNC:HGNC:3272 HPA:HPA029939 HPA:HPA029940
MIM:603911 neXtProt:NX_Q13347 PharmGKB:PA162384875
InParanoid:Q13347 PhylomeDB:Q13347 ChiTaRS:EIF3I GenomeRNAi:8668
NextBio:32515 ArrayExpress:Q13347 Bgee:Q13347 CleanEx:HS_EIF3I
Genevestigator:Q13347 GermOnline:ENSG00000084623 Uniprot:Q13347
Length = 325
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|F1SV90 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006413 "translational initiation" evidence=IEA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:FP102820
RefSeq:NP_001231553.1 UniGene:Ssc.17315 Ensembl:ENSSSCT00000004007
GeneID:100521499 KEGG:ssc:100521499 Uniprot:F1SV90
Length = 325
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---KIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>MGI|MGI:1860763 [details] [associations]
symbol:Eif3i "eukaryotic translation initiation factor 3,
subunit I" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1860763 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006413 eggNOG:COG2319
GO:GO:0003743 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 OMA:ATVAGWS OrthoDB:EOG4HX519 ChiTaRS:EIF3I
EMBL:AF188297 EMBL:AF271072 EMBL:AK012375 EMBL:AK002896
EMBL:AK010781 EMBL:BC029625 IPI:IPI00269613 RefSeq:NP_061269.1
UniGene:Mm.250874 ProteinModelPortal:Q9QZD9 SMR:Q9QZD9
MINT:MINT-1869798 STRING:Q9QZD9 PhosphoSite:Q9QZD9
REPRODUCTION-2DPAGE:Q9QZD9 PaxDb:Q9QZD9 PRIDE:Q9QZD9
Ensembl:ENSMUST00000102593 GeneID:54709 KEGG:mmu:54709
InParanoid:Q9QZD9 NextBio:311544 Bgee:Q9QZD9 Genevestigator:Q9QZD9
GermOnline:ENSMUSG00000028798 Uniprot:Q9QZD9
Length = 325
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 75/324 (23%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYM---KIPCNDSKITSAVWGPLGECVIAGHESGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|F1P5U8 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0045120 "pronucleus" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0045120
GO:GO:0005669 InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK EMBL:AADN02013226
IPI:IPI00811057 Ensembl:ENSGALT00000008776 ArrayExpress:F1P5U8
Uniprot:F1P5U8
Length = 1851
Score = 134 (52.2 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 36/101 (35%), Positives = 54/101 (53%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++ PMDL TI + + Y++ F+ DV
Sbjct: 1501 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVITNPMDLETICKNISKHKYQNRETFLDDVNL 1560
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
V NS YN ++ +K + I L+E+ +EHL +L
Sbjct: 1561 VLANSIKYNGPDSQYTKTAQEIVNICYQTLAEY-DEHLTQL 1600
Score = 125 (49.1 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1386 PNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSREEFREHLELIVKNSATY 1445
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1446 NGPKHSLTQISQSML-DLCDEKLK 1468
Score = 44 (20.5 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+R + ED GD A E Q P
Sbjct: 1666 KQRAPEVEDADGDLADEEEGSTQQP 1690
Score = 44 (20.5 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 23/95 (24%), Positives = 38/95 (40%)
Query: 1747 DPEQPGP-----------STSYAEPV-ASTSXXXXXXXXXXXXXXEESASESQEDENSIP 1794
DP PGP STS + P AS ++ A E ++ + +
Sbjct: 1621 DPMTPGPYTPQPSDLYDTSTSLSVPCGASVCHYESNLSAMDTAPKKQRAPEVEDADGDLA 1680
Query: 1795 ETD--TTEQPAKKLKVLYPK---RRGQQSEDGSGD 1824
+ + +T+QP + VLY G+ +DGS +
Sbjct: 1681 DEEEGSTQQP--QASVLYEDLLMSDGEDDDDGSDE 1713
Score = 38 (18.4 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 531 TGVIKEEPQQNMSQPEVKDPWNLSND 556
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 131 (51.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 522
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 295 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VL 351
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 579
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 352 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 403
Query: 580 ASTSTDGCIGFW 591
S S D I W
Sbjct: 404 VSASGDRTIKVW 415
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 385 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 440
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 441 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 478
Score = 113 (44.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 270 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 325
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 326 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 379
Query: 599 IS 600
I+
Sbjct: 380 IT 381
Score = 97 (39.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 440 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 495
Query: 793 DILSS 797
D++++
Sbjct: 496 DLVAA 500
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 152 (58.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 52/183 (28%), Positives = 88/183 (48%)
Query: 414 LSSYDYIARQHGTSLLVPNSVKVHNTVNVLRSRE----YSGPLSRSLMISSHKYSNLRQH 469
+S +D + +Q L +K T NV S++ SG S+ I S S+ +
Sbjct: 39 ISIWD-LRKQVLNQSLYEEDIKAEVT-NVCLSKDGALLASGYSDGSIRIWS--MSDYQLQ 94
Query: 470 YVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNR 529
V GH +V + F++LG ++V+G+ D + +W L LRG +I+ + + R
Sbjct: 95 AVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLER 154
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+ L + D I+IW+ +T I +VGH+ I G++ P E L S ++D I
Sbjct: 155 SNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETR----LCSCTSDNQIR 210
Query: 590 FWK 592
FW+
Sbjct: 211 FWR 213
Score = 141 (54.7 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 482 VLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKT 541
V K G ++ +G D I++W D +L A G G ++ + + +L +G+ D
Sbjct: 65 VCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTE 124
Query: 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601
+ +W++ T + + L GH+ IT V LE + N+L ++S DG I W + I
Sbjct: 125 VIVWDIITESGLFRLRGHRDQITSVKL--LERS--NHLITSSKDGFIKIWDTETQHCIQT 180
Query: 602 TVFHEPVMFNERIRPGNAHILCSSFS 627
V H ++ + P LCS S
Sbjct: 181 IVGHRNPIWGIDVNPDETR-LCSCTS 205
Score = 81 (33.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 42/178 (23%), Positives = 76/178 (42%)
Query: 622 LCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSG 681
LC+ F+PG L + G+ + V+++ S + ++ H V S+ + SG
Sbjct: 439 LCTVFAPGNLHVIVGTKTGTIEVFELA---SAARVASIKAHEGSVWSLVLTPDLRGVTSG 495
Query: 682 SRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITA 739
D W ++ SQ +N L TK E++ V + + A ++++ +
Sbjct: 496 GADKLVKFWDFELIASQENSKHKVLNLSL--TKTLKVESD----VLALKYSADNKFLAVS 549
Query: 740 INFNFQIKIWDAFNGDLVQV---LKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
+ N +KI F D V+ L GH V L+ DS ++++ D I IW +
Sbjct: 550 LLDN-TVKI---FYTDTVKFHLSLYGHKLPVMCLDISD-DSTLIITGSADKNIKIWGL 602
Score = 58 (25.5 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
+IK WDA + +Q ++ H EV+ L +S HD I I++
Sbjct: 638 RIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGD-FFISGSHDRSIRIFN 685
Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 723 KVTMVAWDASD--RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 780
K+ ++ D SD +IT + + IKIW GD + H + + + P +
Sbjct: 573 KLPVMCLDISDDSTLIITG-SADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIP-STHHF 630
Query: 781 LSAGHDGLIIIWD 793
+SA D I WD
Sbjct: 631 ISASKDKRIKYWD 643
Score = 55 (24.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/105 (23%), Positives = 43/105 (40%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
I+ SF P + S D ++ + D + I +E H +V S+ F+S
Sbjct: 618 IMQVSFIPSTHHFISASKDKRIKYWDADKFEH---IQTIEAHHGEVWSLAMGSVGDFFIS 674
Query: 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETS--DETNKKIK 723
GS D + I + + F+ D + T E + D+T + K
Sbjct: 675 GSHDRSIRI-FNQTETPIFVESDRQREMEQTWEATLEDDTRMRTK 718
>UNIPROTKB|F6UPV2 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 Ensembl:ENSCAFT00000027104
EMBL:AAEX03026487 Uniprot:F6UPV2
Length = 1893
Score = 145 (56.1 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + P S PF PV+K PDY K++I+PMDL TIR+ + Y+S F+ DV
Sbjct: 1536 VTQKMMAVPVSWPFHHPVNKKFVPDYYKVIISPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 1600 VFHNSRNYNQNKRSKIYIMTTR---------LSEFAEEHLRRL 1633
+ NS YN S+ Y T + L+E+ +EHL +L
Sbjct: 1596 ILANSVKYNVGPESQ-YTKTAQEIVNVCYQTLTEY-DEHLTQL 1636
Score = 122 (48.0 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1421 PNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATY 1480
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1481 NGPKHSLTQISQSML-DLCDEKLK 1503
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 22/104 (21%), Positives = 40/104 (38%)
Query: 1370 DRDATCEKIITGL-EEVMGLSVAEPFLVPVDISQXXXXXXXXXXXXDLTTLRARFQNRFY 1428
D T I+ + ++ L PF PV+ DL TLR + R Y
Sbjct: 1401 DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1460
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ + + N+ +N P ++ + ++ + DL +KE
Sbjct: 1461 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 1504
Score = 44 (20.5 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 1275 TAIAREWNVGDRFCSMIDDAWWWGTIEGKPSPTKSPFLGY---KILWDNNERENLSPWDL 1331
T A +NV F + +DD W +I P + G I+WD L L
Sbjct: 463 TRNAMAYNVQQGFAATLDDDKPWYSIF--PIDNEELVYGRWEDNIIWDAQAMPRL----L 516
Query: 1332 EPPKEGKEATEPGGSLPVEPEEIQE 1356
EPP + + L + P+E +E
Sbjct: 517 EPPVLTLDPNDENLILEI-PDEKEE 540
Score = 43 (20.2 bits), Expect = 0.00056, Sum P(6) = 0.00056
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 921 PDITTNDDGHVEIVEGSERNGERPVEV 947
P T DG + + E SE NG ++V
Sbjct: 689 PQDLTGKDGDLILAEYSEENGPLMMQV 715
Score = 43 (20.2 bits), Expect = 0.00056, Sum P(6) = 0.00056
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 181 DVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKD 233
D + + N N QNK++ + R E + L+R+ + S + N +D
Sbjct: 1117 DFEEMGKNIENMLQNKKTSSQLSRER-EEQERKELQRMLLAAGSAASGNNHRD 1168
Score = 42 (19.8 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1812 KRRGQQSEDGSGDNASEMSELKQDP 1836
K+ Q+ ED GD A E Q P
Sbjct: 1705 KQVTQEGEDADGDLADEEEGSMQQP 1729
Score = 39 (18.8 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 1747 DPEQPGPSTSYAEPVASTSXXXXXXXXXXXXXXEESASESQEDENSIPETDTTEQ 1801
DP PGP T + T+ E + S + + PE T++
Sbjct: 1657 DPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVL-DIPTATPEKQVTQE 1710
Score = 38 (18.4 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 566 TGVIKEEPQQNMSQPEVKDPWNLSND 591
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 131 (51.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 522
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 331 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VL 387
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 579
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 388 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 439
Query: 580 ASTSTDGCIGFW 591
S S D I W
Sbjct: 440 VSASGDRTIKVW 451
Score = 129 (50.5 bits), Expect = 0.00030, P = 0.00030
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 514
Score = 113 (44.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 599 IS 600
I+
Sbjct: 416 IT 417
Score = 97 (39.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 793 DILSS 797
D++++
Sbjct: 532 DLVAA 536
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 169 (64.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 58/220 (26%), Positives = 100/220 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + + V F IV+ +DD +KLW G L+ TL G + + + ++ ++
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G+ D+T+RIW++ T + VL H +T V+F +G + + S+S DG W
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDF---NRDG-SLIVSSSYDGLCRIWDS 184
Query: 594 KLDIDISKTVFHE--PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651
+ + E PV F +R FSP G F+ G+ D+ +R++ +
Sbjct: 185 GTGHCVKTLIDDENPPVSF---VR----------FSPNGKFILVGTLDNTLRLWNISSAK 231
Query: 652 SPLGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIW 690
L ++ S +S ++ R VSGS D +W
Sbjct: 232 F-LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Score = 158 (60.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 57/224 (25%), Positives = 103/224 (45%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH + FCV F+ +IV+G+ D +++W GK L L S ++ + + L
Sbjct: 110 IGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSL 169
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+ + + D RIW+ T + L+ + ++ V F P NG L T D + W
Sbjct: 170 IVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP---NGKFILVGT-LDNTLRLW 225
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNA-HILCSSFS-PGGLFLATGSGDHHVRVYKMDG 649
+IS F + + + NA + + S+FS G + +GS D+ V +++++
Sbjct: 226 ------NISSAKFLKT--YTGHV---NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN- 273
Query: 650 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK 693
S + ++E H++ V ++ + SGS D T IW K
Sbjct: 274 --SKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 47/199 (23%), Positives = 90/199 (45%)
Query: 598 DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLG-- 655
+I T P + ++ + N + FS G LA+ S D +R Y ++ ++ P+
Sbjct: 4 EIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEP 63
Query: 656 ILEVEEHSDKVDSIQWSHSHLRF-VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKET 714
+ E H + + + +S S RF VS S D T +W + + T + HT
Sbjct: 64 VQEFTGHENGISDVAFS-SDARFIVSASDDKTLKLWDVETGSL------IKTLIGHTNYA 116
Query: 715 SDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774
V ++ +++ +F+ ++IWD G ++VL H++ V ++ +
Sbjct: 117 F----------CVNFNPQSNMIVSG-SFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 775 FDSRVLLSAGHDGLIIIWD 793
D +++S+ +DGL IWD
Sbjct: 166 -DGSLIVSSSYDGLCRIWD 183
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 42/144 (29%), Positives = 70/144 (48%)
Query: 413 VLSSYDYIAR--QHGTSLLVPNSVKVHNT-VNVLRSREYS-----GPLSRSLMISSHKYS 464
V SSYD + R GT V + N V+ +R G L +L + + +
Sbjct: 171 VSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSA 230
Query: 465 NLRQHYVNLGHLSAVFCV--LFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI 521
+ Y GH++A +C+ F G+ IV+G++D + +W KLL L G + +
Sbjct: 231 KFLKTYT--GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETV 288
Query: 522 SDIAIDNRNILLAAGTVDKTIRIW 545
++A L+A+G++DKT+RIW
Sbjct: 289 MNVACHPTENLIASGSLDKTVRIW 312
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 51/174 (29%), Positives = 83/174 (47%)
Query: 674 SHLRFVSG---SRDGTALIWYYKCSQWRFIRL-DMNTCL-PHTKETSDETNKKIKVTMVA 728
SH R VS S DG L S + IR +NT P + + T + ++ VA
Sbjct: 22 SHNRAVSSVKFSSDGRLLA---SASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 729 WDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGL 788
+ + R++++A + + +K+WD G L++ L GHTN F + +P S +++S D
Sbjct: 79 FSSDARFIVSASD-DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDET 136
Query: 789 IIIWDILSSKQRGYKWFHN----IVEGQGEGALFDGKWSPDGTTCALTDS-YGH 837
+ IWD+ + K H+ V+ +G+L S DG C + DS GH
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSS-SYDGL-CRIWDSGTGH 188
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 130 (50.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 522
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 331 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VL 387
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 579
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 388 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 439
Query: 580 ASTSTDGCIGFW 591
S S D I W
Sbjct: 440 VSASGDRTIKVW 451
Score = 130 (50.8 bits), Expect = 0.00024, P = 0.00024
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F + S + DG I
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI------VSGAYDGKIKV 530
Query: 591 WKYKLDID 598
W +D
Sbjct: 531 WDLMAALD 538
Score = 108 (43.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 599 IS 600
I+
Sbjct: 416 IT 417
Score = 98 (39.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 793 DILSS 797
D++++
Sbjct: 532 DLMAA 536
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 130 (50.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEIS 522
S L + GH +V C+ +D+ VI+TG+ D +++W G++L TL C +
Sbjct: 331 STLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VL 387
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYL 579
+ +N ++ + D++I +W++ + I+ VLVGH+ + V+F Y+
Sbjct: 388 HLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYI 439
Query: 580 ASTSTDGCIGFW 591
S S D I W
Sbjct: 440 VSASGDRTIKVW 451
Score = 130 (50.8 bits), Expect = 0.00024, P = 0.00024
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F + S + DG I
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI------VSGAYDGKIKV 530
Query: 591 WKYKLDID 598
W +D
Sbjct: 531 WDLMAALD 538
Score = 108 (43.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 599 IS 600
I+
Sbjct: 416 IT 417
Score = 98 (39.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 793 DILSS 797
D++++
Sbjct: 532 DLMAA 536
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 130 (50.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 34/122 (27%), Positives = 62/122 (50%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 532
GH +V C+ +D+ VI+TG+ D +++W G++L TL C + + +N +
Sbjct: 300 GHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHLRFNNG--M 354
Query: 533 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 355 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYIVSASGDRTIK 408
Query: 590 FW 591
W
Sbjct: 409 VW 410
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 380 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 435
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 436 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 473
Score = 114 (45.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 265 VYCLQYDD--QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII--TGSS 320
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 321 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 374
Query: 599 IS 600
I+
Sbjct: 375 IT 376
Score = 97 (39.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 435 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 490
Query: 793 DILSS 797
D++++
Sbjct: 491 DLVAA 495
>ZFIN|ZDB-GENE-030131-5576 [details] [associations]
symbol:taf1 "TAF1 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
ZFIN:ZDB-GENE-030131-5576 GO:GO:0006355 GO:GO:0003677 GO:GO:0006352
EMBL:BX005407 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0005669 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOGENOM:HOG000020066 HOVERGEN:HBG050223 CTD:6872
GeneTree:ENSGT00390000012659 OMA:DEFYYPK IPI:IPI00499221
RefSeq:NP_001038250.1 UniGene:Dr.104785 SMR:Q1LYC2
Ensembl:ENSDART00000051196 GeneID:555452 KEGG:dre:555452
InParanoid:Q1LYC2 NextBio:20880984 Uniprot:Q1LYC2
Length = 1947
Score = 139 (54.0 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++I PMDL T+R+ + Y++ F+ DV
Sbjct: 1581 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIINPMDLDTLRKNISKHKYQNREVFLSDVGL 1640
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
+ NS YN + +K + + L+E+ +EHL +L
Sbjct: 1641 IHTNSVKYNGPDSPYTKTALEIVNVCKQTLAEY-DEHLTQL 1680
Score = 126 (49.4 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
Identities = 30/81 (37%), Positives = 42/81 (51%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + V+ +F NS Y
Sbjct: 1466 PNTYPFHTPVNGKVVKDYYKIITRPMDLQTLRENVRKRMYPSREEFRESVELIFKNSATY 1525
Query: 193 NQNKRSKIYIMTTRLSEFAEE 213
N K + LS E+
Sbjct: 1526 NGAKHPLTVVAQAMLSLCVEK 1546
Score = 38 (18.4 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 597 TGVIKDEPQQNMSQPEIKDPWNLSND 622
Score = 37 (18.1 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 1672 ESDDEVLSRKRRGKSTYENDFD 1693
+ DDE+L R R E+D D
Sbjct: 1759 DEDDELLMRPPRRMHIDEDDDD 1780
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 154 (59.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 55/219 (25%), Positives = 101/219 (46%)
Query: 480 FCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCS---GEIS-----DIAIDNRNI 531
+C F +++VT + L KLW+ D L+ TLRG + G IS + ++ ++
Sbjct: 221 YCQ-FSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDV 279
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+A+ D ++++W+L + PI+ + GH + V + P +G +L +T D W
Sbjct: 280 NMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHP---SG-RFLGTTCYDHSWRLW 335
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651
D+++ + + H+ E G H L F P G TG D RV+ +
Sbjct: 336 ----DLEVQEEILHQ-----EGHSKG-VHDL--HFHPDGSLAGTGGLDSFARVWDLR--- 380
Query: 652 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ ++ +E H ++ SI +S + +GS D +W
Sbjct: 381 TGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVW 419
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 38/152 (25%), Positives = 61/152 (40%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V + F G + TG D ++W R G+ + L G EI I +
Sbjct: 348 GHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHV 407
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A G+ D ++W+L+ I + HQ +++ V F P N +YL + + D W +
Sbjct: 408 ATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQP---NDGHYLLTGAYDNTAKIWTH 464
Query: 594 KLDIDISKTVFHEPVMFNERIRP-GNAHILCS 624
+ HE + + P G CS
Sbjct: 465 PGWSPLKTLAGHEGKVMGVDLSPDGQLIATCS 496
Score = 70 (29.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 25/89 (28%), Positives = 35/89 (39%)
Query: 747 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH 806
K+WD + + H N V ++ P D LL+ +D IW G+
Sbjct: 417 KVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWT-----HPGWSPLK 471
Query: 807 NIVEGQGEGALFDGKWSPDGTTCALTDSY 835
+ G EG + SPDG A T SY
Sbjct: 472 TLA-GH-EGKVMGVDLSPDGQLIA-TCSY 497
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 1821 GSGDNASEMSELKQ 1834
GSGDNA ++ +L+Q
Sbjct: 410 GSGDNACKVWDLRQ 423
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 130 (50.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 34/122 (27%), Positives = 62/122 (50%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 532
GH +V C+ +D+ VI+TG+ D +++W G++L TL C + + +N +
Sbjct: 341 GHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHLRFNNG--M 395
Query: 533 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYIVSASGDRTIK 449
Query: 590 FW 591
W
Sbjct: 450 VW 451
Score = 129 (50.5 bits), Expect = 0.00030, P = 0.00030
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 514
Score = 114 (45.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ T ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 599 IS 600
I+
Sbjct: 416 IT 417
Score = 97 (39.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 793 DILSS 797
D++++
Sbjct: 532 DLVAA 536
>UNIPROTKB|Q5EBE8 [details] [associations]
symbol:eif3i "Eukaryotic translation initiation factor 3
subunit I" species:8364 "Xenopus (Silurana) tropicalis" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
GeneTree:ENSGT00630000089849 HOVERGEN:HBG000900 OMA:ATVAGWS
OrthoDB:EOG4HX519 EMBL:CR855704 EMBL:BC089722 EMBL:BC127352
EMBL:BC157539 RefSeq:NP_001015781.1 UniGene:Str.31533
ProteinModelPortal:Q5EBE8 STRING:Q5EBE8 PRIDE:Q5EBE8
Ensembl:ENSXETT00000011458 GeneID:548498 KEGG:xtr:548498
Xenbase:XB-GENE-974377 InParanoid:Q5EBE8 Bgee:Q5EBE8 Uniprot:Q5EBE8
Length = 325
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 73/324 (22%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D+ D R++
Sbjct: 8 GHERSITQIKYNRDGDLLFTVAKDPVVNVWYSVNGERLGTYSGHTGAVWCVDVDWDTRHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L +G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--SGSADNSCRLWDCETGKQLALLETNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYKLDIDI---SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ ID+ ++ +EP M +I + I + + P G + G + + Y
Sbjct: 120 CFVSFIDLRDPTQIEDNEPYM---KIPCSESKITSAVWGPLGENIIAGHENGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ + ++EHS +++ IQ S FV+ S+D T+ ++ + + T
Sbjct: 177 SGEI---VNSIKEHSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAAISPIYDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHVAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
L HP D + S G DG + I
Sbjct: 289 NSLAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|Q5R7R2 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9601 "Pongo abelii" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 EMBL:CR860050 RefSeq:NP_001126286.1
UniGene:Pab.18842 ProteinModelPortal:Q5R7R2 PRIDE:Q5R7R2
GeneID:100173261 KEGG:pon:100173261 InParanoid:Q5R7R2
Uniprot:Q5R7R2
Length = 325
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 74/324 (22%), Positives = 144/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI--SDIAIDNRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + D D +++
Sbjct: 8 GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L G+ D + R+W+ +T +++L + + T C + G + STD +G+
Sbjct: 68 L--TGSADNSCRLWDCETGKQLALLKTNSAVRT----CGFDFGGS--IIMFSTDKQMGYQ 119
Query: 592 KYK--LDI-DISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ D+ D S+ +EP M +I ++ I + + P G + G + Y
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYM---KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ ++ V+EHS +++ IQ S FV+ S+D TA ++ + + T
Sbjct: 177 SGEV---LVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + N V +A D + F+ + + AF + +V KGH +
Sbjct: 231 P-VNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRV-KGHFGLI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
+ HP D + S G DG + I
Sbjct: 289 NSVAFHP-DGKSYSSGGEDGYVRI 311
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 129 (50.5 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 34/122 (27%), Positives = 62/122 (50%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 532
GH +V C+ +D+ VI+TG+ D +++W G++L TL C + + +N +
Sbjct: 341 GHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VLHLRFNNG--M 395
Query: 533 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD------KYIVSASGDRTIK 449
Query: 590 FW 591
W
Sbjct: 450 VW 451
Score = 129 (50.5 bits), Expect = 0.00030, P = 0.00030
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GH +AV V FD + IV+ + D IK+W + + TL G I+ + R+
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD 476
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L+ +G+ D TIR+W+++ A + VL GH+ ++ + F
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 514
Score = 109 (43.4 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W + L G +G + + D R I+ G+
Sbjct: 306 VYCLQYDD--QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII--TGSS 361
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W++ ++ L+ H + + F NG + + S D I W D
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVWDMASPTD 415
Query: 599 IS 600
I+
Sbjct: 416 IT 417
Score = 97 (39.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 476 DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIR---FDNKRIVSGAYDGKIKVW 531
Query: 793 DILSS 797
D++++
Sbjct: 532 DLVAA 536
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/176 (24%), Positives = 85/176 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ ++V+G+ D +++W + G + TL S +S ++ + L+
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
A+G+ D +RIW+ I LV + + V F P NG Y+ +++ D + W
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP---NG-KYILASNLDSTLKLWD 284
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKM 647
+ + + HE N + + + ++FS GG ++ +GS D + ++ +
Sbjct: 285 FSKGKTLKQYTGHE----NSK------YCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/222 (22%), Positives = 95/222 (42%)
Query: 575 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 634
G N +A +S C+ + I + V + ++ N ++ C +F+P +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVV 187
Query: 635 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 694
+GS D VR++ V + + I + HSD V ++ ++ SGS DG IW
Sbjct: 188 SGSFDESVRIWD---VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 695 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 754
Q C+ K D+ N V V + + ++++ A N + +K+WD G
Sbjct: 245 GQ----------CI---KTLVDDENPP--VAFVKFSPNGKYIL-ASNLDSTLKLWDFSKG 288
Query: 755 DLVQVLKGHTNEVFVLESH--PFDSRVLLSAGHDGLIIIWDI 794
++ GH N + + ++ + ++S D I IW++
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V + + +V+ +DD +K++ ++ TL+G + + + ++ L+
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G+ D+++RIW+++T I L H ++ V+F +G + +AS S DG + W
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSF---NRDG-SLIASGSYDGLVRIWDT 242
Query: 594 KLDIDISKTVFHE--PVMFNERIRPGNAHILCSS 625
I V E PV F + P +IL S+
Sbjct: 243 ANGQCIKTLVDDENPPVAF-VKFSPNGKYILASN 275
Score = 120 (47.3 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 431 PNSVKVHN-TVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGE 489
PNS+ N T P + S+ +N + GH ++ F G+
Sbjct: 41 PNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGK 100
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549
+ T + D +K+W TL G ++DIA + + + + + DKT++I+ + T
Sbjct: 101 YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVT 160
Query: 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 609
L GH + NF P + + S S D + W K + I H
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQS----SLVVSGSFDESVRIWDVKTGMCIKTLPAHSD-- 214
Query: 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
P +A SF+ G +A+GS D VR++
Sbjct: 215 ------PVSA----VSFNRDGSLIASGSYDGLVRIW 240
Score = 100 (40.3 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
SF+ G +A+GS D VR++ D + V++ + V +++S + ++ + D
Sbjct: 220 SFNRDGSLIASGSYDGLVRIW--DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLD 277
Query: 685 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 744
T +W + S+ + + K+ + N K + +W+I+ +
Sbjct: 278 STLKLWDF--SKGKTL-----------KQYTGHENSKYCIFANFSVTGGKWIISGSE-DC 323
Query: 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH-DGLIIIW 792
+I IW+ ++VQ L+GHT V + HP + + A D I IW
Sbjct: 324 KIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 69 (29.3 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V+ V+++ D +I + +++ ++IWD NG ++ L N + + +L++
Sbjct: 216 VSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 784 GHDGLIIIWDILSSK 798
D + +WD K
Sbjct: 275 NLDSTLKLWDFSKGK 289
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/176 (24%), Positives = 85/176 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ ++V+G+ D +++W + G + TL S +S ++ + L+
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
A+G+ D +RIW+ I LV + + V F P NG Y+ +++ D + W
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP---NG-KYILASNLDSTLKLWD 284
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKM 647
+ + + HE N + + + ++FS GG ++ +GS D + ++ +
Sbjct: 285 FSKGKTLKQYTGHE----NSK------YCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/222 (22%), Positives = 95/222 (42%)
Query: 575 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 634
G N +A +S C+ + I + V + ++ N ++ C +F+P +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVV 187
Query: 635 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 694
+GS D VR++ V + + I + HSD V ++ ++ SGS DG IW
Sbjct: 188 SGSFDESVRIWD---VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 695 SQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNG 754
Q C+ K D+ N V V + + ++++ A N + +K+WD G
Sbjct: 245 GQ----------CI---KTLVDDENPP--VAFVKFSPNGKYIL-ASNLDSTLKLWDFSKG 288
Query: 755 DLVQVLKGHTNEVFVLESH--PFDSRVLLSAGHDGLIIIWDI 794
++ GH N + + ++ + ++S D I IW++
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V + + +V+ +DD +K++ ++ TL+G + + + ++ L+
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G+ D+++RIW+++T I L H ++ V+F +G + +AS S DG + W
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSF---NRDG-SLIASGSYDGLVRIWDT 242
Query: 594 KLDIDISKTVFHE--PVMFNERIRPGNAHILCSS 625
I V E PV F + P +IL S+
Sbjct: 243 ANGQCIKTLVDDENPPVAF-VKFSPNGKYILASN 275
Score = 120 (47.3 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 431 PNSVKVHN-TVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGE 489
PNS+ N T P + S+ +N + GH ++ F G+
Sbjct: 41 PNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGK 100
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549
+ T + D +K+W TL G ++DIA + + + + + DKT++I+ + T
Sbjct: 101 YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVT 160
Query: 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 609
L GH + NF P + + S S D + W K + I H
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQS----SLVVSGSFDESVRIWDVKTGMCIKTLPAHSD-- 214
Query: 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
P +A SF+ G +A+GS D VR++
Sbjct: 215 ------PVSA----VSFNRDGSLIASGSYDGLVRIW 240
Score = 100 (40.3 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
SF+ G +A+GS D VR++ D + V++ + V +++S + ++ + D
Sbjct: 220 SFNRDGSLIASGSYDGLVRIW--DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLD 277
Query: 685 GTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNF 744
T +W + S+ + + K+ + N K + +W+I+ +
Sbjct: 278 STLKLWDF--SKGKTL-----------KQYTGHENSKYCIFANFSVTGGKWIISGSE-DC 323
Query: 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH-DGLIIIW 792
+I IW+ ++VQ L+GHT V + HP + + A D I IW
Sbjct: 324 KIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 69 (29.3 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V+ V+++ D +I + +++ ++IWD NG ++ L N + + +L++
Sbjct: 216 VSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 784 GHDGLIIIWDILSSK 798
D + +WD K
Sbjct: 275 NLDSTLKLWDFSKGK 289
>UNIPROTKB|Q66J51 [details] [associations]
symbol:eif3i "Eukaryotic translation initiation factor 3
subunit I" species:8355 "Xenopus laevis" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900 EMBL:BC081058
RefSeq:NP_001087664.1 UniGene:Xl.77336 ProteinModelPortal:Q66J51
PRIDE:Q66J51 GeneID:447488 KEGG:xla:447488 Xenbase:XB-GENE-974385
Uniprot:Q66J51
Length = 325
Score = 167 (63.8 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 73/324 (22%), Positives = 145/324 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID--NRNI 531
GH ++ + +++ G+++ T A D ++ +W + +G+ L T G +G + + +D R++
Sbjct: 8 GHERSITQIKYNRDGDLLFTVAKDPVVNVWYSVNGERLGTYNGHTGAVWCVDVDWETRHV 67
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L +G+ D + R+W+ +T +++L + + T C + G N + STD +G+
Sbjct: 68 L--SGSADNSCRLWDCETGKQLALLQTNSAVRT----CGFDFGG-NIIMF-STDKQMGYQ 119
Query: 592 KYKLDIDI---SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ ID+ S+ +EP M +I + I + + P G + G + + Y
Sbjct: 120 CFVSFIDLRDPSQIEDNEPYM---KIPCSESKITSAVWGPLGENIIAGHENGELNHYSAK 176
Query: 649 GVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCL 708
+ + ++EHS +++ IQ S FV+ S+D T+ ++ + + T
Sbjct: 177 SGEI---VNSIKEHSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQ---KTFRTER 230
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD-AFNGDLVQVLKGHTNEV 767
P + V +A D + F+ + + AF + +V KGH +
Sbjct: 231 PVNSAAVSPIYDHV-VLGGGQEAMDVTTTSTRIGKFEARFFHVAFEEEFGRV-KGHFGPI 288
Query: 768 FVLESHPFDSRVLLSAGHDGLIII 791
L HP D + S G DG + I
Sbjct: 289 NSLAFHP-DGKSYSSGGEDGYVRI 311
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 45/169 (26%), Positives = 80/169 (47%)
Query: 436 VHNTVNVLRSREYSGPL-----SRSLMI-SSHKYSNLRQHYVNLGHLSAVFCVLFDKLGE 489
+H+ VL R +G + RS+ + S + V +GH +AV V FD+ +
Sbjct: 287 IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDE--K 344
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549
IV+ + D IK+W + + TL G I+ + R+ L+ +G+ D +IR+W+++
Sbjct: 345 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNSIRLWDIEC 402
Query: 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
A + VL GH+ ++ + F + S + DG I W +D
Sbjct: 403 GACLRVLEGHEELVRCIRFDTKRI------VSGAYDGKIKVWDLVAALD 445
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 71/290 (24%), Positives = 120/290 (41%)
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G D TI+IW+ L + L+GH G + C L+ + + S S+D + W
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV----LC-LQYDD-KVIISGSSDSTVRVWD 276
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
++ + H + + R G + CS ++ T + +R + G +
Sbjct: 277 VNTGEMVNTLIHHCEAVLHLRFNNGMM-VTCSKDRSIAVWDMTSPSEITLRRVLV-GHRA 334
Query: 653 PLGILEVEEH------SDKVDSIQWSHSHLRFV---SGSRDGTALIWY-----YKCSQWR 698
+ +++ +E D+ + WS S FV +G + G A + Y S
Sbjct: 335 AVNVVDFDEKYIVSASGDRTIKV-WSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN 393
Query: 699 FIRL---DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD----- 750
IRL + CL E +E V + +D R V A ++ +IK+WD
Sbjct: 394 SIRLWDIECGACL-RVLEGHEEL-----VRCIRFDTK-RIVSGA--YDGKIKVWDLVAAL 444
Query: 751 ----AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796
A N + L HT VF L+ FD ++S+ HD I+IWD L+
Sbjct: 445 DPRAASNTLCLNTLVEHTGRVFRLQ---FDEFQIVSSSHDDTILIWDFLN 491
Score = 125 (49.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D G+ IV+G D IK+W D + + TL G +G + + D++ I+ +G+
Sbjct: 213 VYCLQYDD-GK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVII--SGSS 268
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
D T+R+W++ T ++ L+ H + + F NG + + S D I W
Sbjct: 269 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN----NGM--MVTCSKDRSIAVW 315
Score = 125 (49.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 32/123 (26%), Positives = 64/123 (52%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNI 531
+GH +V C+ +D +VI++G+ D +++W G+++ TL C + + +N
Sbjct: 247 MGHTGSVLCLQYDD--KVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA-VLHLRFNNG-- 301
Query: 532 LLAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588
++ + D++I +W++ + + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 302 MMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDE------KYIVSASGDRTI 355
Query: 589 GFW 591
W
Sbjct: 356 KVW 358
Score = 98 (39.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
DR V++ + N I++WD G ++VL+GH V + FD++ ++S +DG I +W
Sbjct: 383 DRLVVSGSSDN-SIRLWDIECGACLRVLEGHEELVRCIR---FDTKRIVSGAYDGKIKVW 438
Query: 793 DILSS 797
D++++
Sbjct: 439 DLVAA 443
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 115 (45.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 38/160 (23%), Positives = 72/160 (45%)
Query: 452 LSRSLMISSHKYSNLRQHYVNLG---------HLSAVFCVLFDKLGEVIVT-GADDLLIK 501
LS+ ++++H+ LR ++ G H V V F G +I T G D ++
Sbjct: 86 LSQEHLVTAHRSGLLRLWQLDTGKLVKLWKAQHKGPVIRVEFSPCGRLICTSGGADATLR 145
Query: 502 LWRARDGKLLATLRGCSGEISDIAIDNRNIL---LAAGTVDKTIRIWNLQTLAPISVLVG 558
LW + L L+ G + + + + N+L + AG D T+ WN +T + + G
Sbjct: 146 LWDYSNNSCLGALKDFPGP-AWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTLVHKMRG 204
Query: 559 HQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
H +TG++F + N + + S D + W+ + ++
Sbjct: 205 HLSQVTGLSF-KSNASDCNEIVTVSRDKVMIVWQLQEQLE 243
Score = 113 (44.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 45/188 (23%), Positives = 90/188 (47%)
Query: 611 NERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD-GVDSPLGILEVEE--HSDKVD 667
N ++ G++ + S + L ++ G D VR++++ D L L + H+ +
Sbjct: 372 NCKLIVGHSDTVMSLAASQNLLISVGK-DCSVRLWRLQHDKDCSLEALTQQANCHTSTIG 430
Query: 668 SIQWSHSHLR-FVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTM 726
+ +H+ F S S+DG+ +W S + D N+ + + + +K+ V
Sbjct: 431 CVAMTHNGATGFASVSQDGSMKVWQLVRS-----KEDRNSYSFNLRYAALSHDKE--VNC 483
Query: 727 VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786
VA+ +++ + TA + K+W A + L VL+GHT V+ + P D +++L++ D
Sbjct: 484 VAYAPNNKLIATASQ-DKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVD-QIVLTSSSD 541
Query: 787 GLIIIWDI 794
+ IW I
Sbjct: 542 CTLRIWSI 549
Score = 64 (27.6 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD-SRVLLS 782
V V + D+ V+T+ + + ++IW N +K E +L + D + ++S
Sbjct: 523 VWSVRFSPVDQIVLTSSS-DCTLRIWSISN---FSCIKRFDQECTILRAEFLDHGKFIIS 578
Query: 783 AGHDGLIIIWDI 794
A DGL+ +W+I
Sbjct: 579 AASDGLLKLWNI 590
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 167 (63.8 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 50/165 (30%), Positives = 78/165 (47%)
Query: 431 PNSVKVHNTVNVLRSREYSGPLSRS--LMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKL 487
P S ++ NV S SG S L+ ++ + S+L+ + L GH +FC F+
Sbjct: 12 PGSSQLVKRQNVGSSTARSGGYGESSALIQAAPRLSSLQAPLMELSGHSGEIFCAKFNSA 71
Query: 488 GEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546
G+ I +G+ D I LWRA D + L G G I D+ + ++ + + D + W+
Sbjct: 72 GQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRDSDIIFSASADMHLASWD 131
Query: 547 LQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L T I VGH+ +I ++ + G L S S DG IG W
Sbjct: 132 LTTGERIRRYVGHEEVINSLD---ISKRGEEILFSGSDDGTIGIW 173
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 167 (63.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 53/221 (23%), Positives = 98/221 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + VFC F+ ++V+G+ D +++W R G + TL S +S ++ + L+
Sbjct: 161 GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLI 220
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D +RIW+ + LV + + V F P NG Y+ S++ D + W
Sbjct: 221 TSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP---NG-KYILSSNLDNTLKLWD 276
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFS-PGGLFLATGSGDHHVRVYKMDGVD 651
+ + + HE N + + ++FS GG ++ +GS D + V+ + +
Sbjct: 277 FGKGKTLKQYQGHE----------NNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKE 326
Query: 652 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR--DGTALIW 690
+ +E H+ V + SG+ D T IW
Sbjct: 327 V---VQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 52/245 (21%), Positives = 110/245 (44%)
Query: 447 EYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR 506
++ G S + S+L GH V + + IVT +DD +K++
Sbjct: 92 KFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVP 151
Query: 507 DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 566
K+ TL+G + + + ++ L+ +G+ D+++RIW+++T + L H ++ V
Sbjct: 152 TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAV 211
Query: 567 NFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626
+F +G + + S S DG + W D + + ++ +E P A + F
Sbjct: 212 SF---NRDG-SLITSGSYDGLVRIW------DTANGQCVKTLVDDEN--PPVAFV---KF 256
Query: 627 SPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV-SGSRDG 685
SP G ++ + + D+ ++++ G L + E++ +S + +++ SGS D
Sbjct: 257 SPNGKYILSSNLDNTLKLWDF-GKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDC 315
Query: 686 TALIW 690
+W
Sbjct: 316 KIYVW 320
Score = 127 (49.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA--IDNRNI 531
GH ++ V F G+ + T + D +K+W D TL G ++D A D+++I
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+ A+ DKT++I+ + T+ L GH + NF P + + S S D + W
Sbjct: 137 VTASD--DKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS----SLVVSGSFDESVRIW 190
Query: 592 KYKLDIDISKTVFH-EPVMFNERIRPGNAHILCSSFSPGGL 631
+ + + H +PV R G+ L +S S GL
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGS---LITSGSYDGL 228
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 70/316 (22%), Positives = 131/316 (41%)
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
KL++T+ G + IS + L + DKT++IWN+ L+ L GH+ GVN
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHK---LGVND 126
Query: 569 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT-------VF---HEP----VM---FN 611
+ + + + S D + ++ + ++KT VF P V+ F+
Sbjct: 127 FAWSADSKS-IVTASDDKTLKIYEVPT-VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFD 184
Query: 612 ERIRPGN-----------AH---ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGIL 657
E +R + AH + SF+ G + +GS D VR++ D +
Sbjct: 185 ESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW--DTANGQCVKT 242
Query: 658 EVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717
V++ + V +++S + +S + D T +W + + + + K+
Sbjct: 243 LVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF--GKGKTL-----------KQYQGH 289
Query: 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
N K + +W+I+ + +I +W+ ++VQ L+GHT V + HP +
Sbjct: 290 ENNKYCIFANFSVTGGKWIISGSE-DCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQN 348
Query: 778 RVLLSAGH-DGLIIIW 792
+ A D I IW
Sbjct: 349 MIASGALEPDNTIRIW 364
Score = 77 (32.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V+ V+++ D +IT+ +++ ++IWD NG V+ L N + + +LS+
Sbjct: 208 VSAVSFNR-DGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSS 266
Query: 784 GHDGLIIIWDILSSKQ-RGYKWFHN 807
D + +WD K + Y+ N
Sbjct: 267 NLDNTLKLWDFGKGKTLKQYQGHEN 291
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 166 (63.5 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 474 GHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GHL V CV D + E +TG++D +K+W GKL TL G + D+A+ +R+
Sbjct: 137 GHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPY 196
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
L + + DKT++ W+L+ I GH + V+ P + +A+ D I W
Sbjct: 197 LFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPT----LDLIATAGRDSVIKLWD 252
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625
+ I + V H+ + + P + ++ SS
Sbjct: 253 MRTRIPVITLVGHKGPINQVQCTPVDPQVVSSS 285
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/176 (25%), Positives = 74/176 (42%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH + V + +V+ + D ++LW GK + L + A+ +
Sbjct: 263 VGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFS 322
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+A+ D IR W L A S+L + TG+ L +N + L + +G + F+
Sbjct: 323 VASACTDD-IRSWGL---AEGSLLTNFESEKTGI-INTLSINQDDVLFAGGDNGVLSFYD 377
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
YK E V E G +LCS+F GL L TG D ++++K D
Sbjct: 378 YKSGHKYQSLATREMVGSLE----GERSVLCSTFDKTGLRLITGEADKSIKIWKQD 429
Score = 52 (23.4 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHD 786
+++WD G ++VL H V HP + V + D
Sbjct: 290 VRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDD 330
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 148 (57.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 52/176 (29%), Positives = 82/176 (46%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK-LLATLRGCSGEISDIAIDNRNI 531
+GH VF V E I++ ++D +LW ++D K + G + I D+
Sbjct: 400 IGHTRPVFGVSISPQKEFILSCSEDGFTRLW-SKDTKSTIVKYAGHNAPIWDVQFSPFGY 458
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
A + D+T R+W+++ AP+ V VGHQ + V+F P N YLA+ S+D W
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHP---NAA-YLATGSSDHTTRMW 514
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
D+ TV +FN P +A LC S GL LA+ ++V+ +
Sbjct: 515 ----DVRTGGTVR----VFNAHHSPVSA--LC--MSADGLSLASADESGIIKVWDL 558
Score = 106 (42.4 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 46/182 (25%), Positives = 74/182 (40%)
Query: 476 LSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG---KLL---------ATLRGCSGEISD 523
LSAV C F + G D I L+ + + L+ ++L G + +
Sbjct: 349 LSAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFG 408
Query: 524 IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTS 583
++I + + + + D R+W+ T + I GH I V F P G+ Y A+ S
Sbjct: 409 VSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPF---GY-YFATAS 464
Query: 584 TDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVR 643
D W + + V H+ N+ + C SF P +LATGS DH R
Sbjct: 465 HDQTARLWDVEHAAPLRVFVGHQ----ND--------VDCVSFHPNAAYLATGSSDHTTR 512
Query: 644 VY 645
++
Sbjct: 513 MW 514
Score = 81 (33.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 747 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799
++WD G V+V H + V L D L SA G+I +WD+ SS Q
Sbjct: 512 RMWDVRTGGTVRVFNAHHSPVSAL-CMSADGLSLASADESGIIKVWDLRSSNQ 563
Score = 75 (31.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 746 IKIWDAFNGDL-VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKW 804
IK+WD + + V +K H++ V+ L S +D+++L+S G D + WD+ Y+
Sbjct: 553 IKVWDLRSSNQHVSFVK-HSSIVYSL-SFSYDNKILVSGGADTDVNFWDLT------YR- 603
Query: 805 FHNIVEGQGEGALFDGK 821
+N+ +G+ LF+ K
Sbjct: 604 -NNLSDGEQSPLLFNFK 619
>WB|WBGene00022473 [details] [associations]
symbol:bet-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0005694 "chromosome" evidence=IDA] [GO:0014018 "neuroblast fate
specification" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IGI] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070090
"metaphase plate" evidence=IDA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0005694
GO:GO:0002119 GO:GO:0040011 GO:GO:0000003 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359
GeneTree:ENSGT00700000104285 GO:GO:0014018 EMBL:FO080992
GO:GO:0070090 UniGene:Cel.17209 GeneID:172054
KEGG:cel:CELE_Y119C1B.8 CTD:172054 RefSeq:NP_491384.3
ProteinModelPortal:Q95Y80 SMR:Q95Y80 DIP:DIP-26262N IntAct:Q95Y80
MINT:MINT-1066832 PRIDE:Q95Y80 EnsemblMetazoa:Y119C1B.8a.1
EnsemblMetazoa:Y119C1B.8a.2 UCSC:Y119C1B.8a WormBase:Y119C1B.8a
HOGENOM:HOG000020442 InParanoid:Q95Y80 OMA:VSLMPKD NextBio:873831
ArrayExpress:Q95Y80 Uniprot:Q95Y80
Length = 853
Score = 122 (48.0 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 34/106 (32%), Positives = 49/106 (46%)
Query: 137 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
PF+KPVD L P Y + V PMDL TI L+ Y + + D++ VF N +N
Sbjct: 63 PFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDIETVFQNCYTFN- 121
Query: 195 NKRSKIYIMTTRLSEFAEEHLRR-------LTVRWNSHKNKENKKD 233
K + IM + E ++ L + + V W +K K K D
Sbjct: 122 GKEDDVTIMAQNVHEVIKKSLEQAPREEHDMDVYWGKNKKKPAKSD 167
Score = 113 (44.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 1516 RAQRE-AMNQKKLKRPF--NWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDYDK 1567
RA+RE A+ +K++ +P + K C ++L E PF +PVD +L DY K
Sbjct: 243 RAKREVAVVKKEVHQPLLPSMK-PCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHK 301
Query: 1568 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608
I+ PMDL +++ ++ Y+ P DF DV+ + N YN
Sbjct: 302 IIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYN 342
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQ 1816
+ +SESQ +S ++D ++P+ P++ GQ
Sbjct: 654 KRESSESQSSSSSDDDSDDEDRPS------IPRKSGQ 684
>UNIPROTKB|Q95Y80 [details] [associations]
symbol:bet-1 "Protein BET-1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0005694 GO:GO:0002119
GO:GO:0040011 GO:GO:0000003 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359
GeneTree:ENSGT00700000104285 GO:GO:0014018 EMBL:FO080992
GO:GO:0070090 UniGene:Cel.17209 GeneID:172054
KEGG:cel:CELE_Y119C1B.8 CTD:172054 RefSeq:NP_491384.3
ProteinModelPortal:Q95Y80 SMR:Q95Y80 DIP:DIP-26262N IntAct:Q95Y80
MINT:MINT-1066832 PRIDE:Q95Y80 EnsemblMetazoa:Y119C1B.8a.1
EnsemblMetazoa:Y119C1B.8a.2 UCSC:Y119C1B.8a WormBase:Y119C1B.8a
HOGENOM:HOG000020442 InParanoid:Q95Y80 OMA:VSLMPKD NextBio:873831
ArrayExpress:Q95Y80 Uniprot:Q95Y80
Length = 853
Score = 122 (48.0 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 34/106 (32%), Positives = 49/106 (46%)
Query: 137 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
PF+KPVD L P Y + V PMDL TI L+ Y + + D++ VF N +N
Sbjct: 63 PFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDIETVFQNCYTFN- 121
Query: 195 NKRSKIYIMTTRLSEFAEEHLRR-------LTVRWNSHKNKENKKD 233
K + IM + E ++ L + + V W +K K K D
Sbjct: 122 GKEDDVTIMAQNVHEVIKKSLEQAPREEHDMDVYWGKNKKKPAKSD 167
Score = 113 (44.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 1516 RAQRE-AMNQKKLKRPF--NWKNECREVLETLWVCPDSE---PFRKPVD--KLDHPDYDK 1567
RA+RE A+ +K++ +P + K C ++L E PF +PVD +L DY K
Sbjct: 243 RAKREVAVVKKEVHQPLLPSMK-PCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHK 301
Query: 1568 IVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYN 1608
I+ PMDL +++ ++ Y+ P DF DV+ + N YN
Sbjct: 302 IIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYN 342
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQ 1816
+ +SESQ +S ++D ++P+ P++ GQ
Sbjct: 654 KRESSESQSSSSSDDDSDDEDRPS------IPRKSGQ 684
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 140 (54.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 454 RSLMISSHKYSNLRQHYV--NLGHLSAVFCVLFDKLGE-VIVTGADDLLIKLW-----RA 505
+S+ + S+ R H V GH +AV + ++ + +V+G+ D +K+W
Sbjct: 408 KSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTG 467
Query: 506 RDGKLL----ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQG 561
+G ++ +T R +++ + + + LLA+G+ D+T ++W L L + V GH+
Sbjct: 468 AEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRR 527
Query: 562 IITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT 602
+ V F P++ L S S DG + W + D KT
Sbjct: 528 GVWSVQFSPVD----QILGSASADGSVRIWSIQ-DFSCLKT 563
Score = 118 (46.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 49/171 (28%), Positives = 80/171 (46%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLG-ILEVEEHSDKVDSIQWSHSHLRFV-SGSR 683
F G +F AT + D VRV++MD + + + HS+ V SI S +FV SGS+
Sbjct: 395 FRKGSMF-ATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQ 453
Query: 684 DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFN 743
D T +W + + M K S E + V V +D+ ++ + + +
Sbjct: 454 DCTVKVWDLPETTGAEGVMMM-------KARSTERAHEKDVNSVCVSPNDK-LLASGSQD 505
Query: 744 FQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
K+W + L+ V +GH V+ ++ P D ++L SA DG + IW I
Sbjct: 506 RTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVD-QILGSASADGSVRIWSI 555
Score = 109 (43.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 40/155 (25%), Positives = 68/155 (43%)
Query: 453 SRSLMISSH--KYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL 510
SR+L++ K R+ + + H V + FD ++ TG D IKLW
Sbjct: 82 SRALLLRQWDWKQQQCRRSWRAV-HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYC 140
Query: 511 LATLRGCSGEISDIAI--DNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L+G SG + + D + L + + D IRIW+L++ + VL H +T + F
Sbjct: 141 THNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAF 200
Query: 569 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
P +G L S+ D W + + + +T+
Sbjct: 201 SP---DGHT-LVSSGRDKICSVWDLQ-EQKVKRTI 230
Score = 62 (26.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR--VLLSAGHDGLIIIWDILSSK 798
++IW + ++ +GH V + F SR L+S+G DGL+ +W I +++
Sbjct: 550 VRIWSIQDFSCLKTFEGHDASVLKII---FVSRGTQLVSSGSDGLVKLWTIKTNE 601
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
+K+W + V+ L H ++V+ L D ++++ D I +W
Sbjct: 592 VKLWTIKTNECVRTLDAHQDKVWALHGGCRDE-LMVTGSADSTITVW 637
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 131 (51.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W +D L G +G + + DNR I+ +G+
Sbjct: 225 VYCLQYDD--DKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVII--SGSS 280
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W+++T I L+ H + + F NG + + S D I W D
Sbjct: 281 DATVRVWDVETGECIKTLIHHCEAVLHLRFA----NGI--MVTCSKDRSIAVWDMVSPRD 334
Query: 599 IS 600
I+
Sbjct: 335 IT 336
Score = 118 (46.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 532
GH +V C+ +D VI++G+ D +++W G+ + TL C + + N +
Sbjct: 260 GHTGSVLCLQYDN--RVIISGSSDATVRVWDVETGECIKTLIHHCEAVLH---LRFANGI 314
Query: 533 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD------RYIVSASGDRTIK 368
Query: 590 FW 591
W
Sbjct: 369 VW 370
Score = 92 (37.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
R V++ + N I++WD +G ++VL+GH V + FD + ++S +DG I +WD
Sbjct: 396 RLVVSGSSDN-TIRLWDIHSGVCLRVLEGHEELVRCIR---FDEKRIVSGAYDGKIKVWD 451
Query: 794 I 794
+
Sbjct: 452 L 452
Score = 85 (35.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 730 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 789
D DR++++A + IK+W + V+ L GH + L+ + R+++S D I
Sbjct: 352 DFDDRYIVSASG-DRTIKVWSMDTLEFVRTLAGHRRGIACLQ---YRGRLVVSGSSDNTI 407
Query: 790 IIWDILS 796
+WDI S
Sbjct: 408 RLWDIHS 414
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 746 IKIWDAFNG-DLV--QVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
I +WD + D+ +VL GH V V++ FD R ++SA D I +W +
Sbjct: 324 IAVWDMVSPRDITIRRVLVGHRAAVNVVD---FDDRYIVSASGDRTIKVWSM 372
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 131 (51.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V+C+ +D + IV+G D IK+W +D L G +G + + DNR I+ +G+
Sbjct: 225 VYCLQYDD--DKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVII--SGSS 280
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D T+R+W+++T I L+ H + + F NG + + S D I W D
Sbjct: 281 DATVRVWDVETGECIKTLIHHCEAVLHLRFA----NGI--MVTCSKDRSIAVWDMVSPRD 334
Query: 599 IS 600
I+
Sbjct: 335 IT 336
Score = 118 (46.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATL-RGCSGEISDIAIDNRNIL 532
GH +V C+ +D VI++G+ D +++W G+ + TL C + + N +
Sbjct: 260 GHTGSVLCLQYDN--RVIISGSSDATVRVWDVETGECIKTLIHHCEAVLH---LRFANGI 314
Query: 533 LAAGTVDKTIRIWNLQTLAPIS---VLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
+ + D++I +W++ + I+ VLVGH+ + V+F Y+ S S D I
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD------RYIVSASGDRTIK 368
Query: 590 FW 591
W
Sbjct: 369 VW 370
Score = 92 (37.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
R V++ + N I++WD +G ++VL+GH V + FD + ++S +DG I +WD
Sbjct: 396 RLVVSGSSDN-TIRLWDIHSGVCLRVLEGHEELVRCIR---FDEKRIVSGAYDGKIKVWD 451
Query: 794 I 794
+
Sbjct: 452 L 452
Score = 85 (35.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 730 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 789
D DR++++A + IK+W + V+ L GH + L+ + R+++S D I
Sbjct: 352 DFDDRYIVSASG-DRTIKVWSMDTLEFVRTLAGHRRGIACLQ---YRGRLVVSGSSDNTI 407
Query: 790 IIWDILS 796
+WDI S
Sbjct: 408 RLWDIHS 414
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 746 IKIWDAFNG-DLV--QVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
I +WD + D+ +VL GH V V++ FD R ++SA D I +W +
Sbjct: 324 IAVWDMVSPRDITIRRVLVGHRAAVNVVD---FDDRYIVSASGDRTIKVWSM 372
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 111 (44.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 29/87 (33%), Positives = 39/87 (44%)
Query: 708 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 767
L KE +++ +A ++RWV TA N I I+D NG V L+GH V
Sbjct: 259 LADAKELFSVRGPSLEINTIAVSPNNRWVATA-NKEGTIMIFDLANGKQVTTLRGHQGWV 317
Query: 768 FVLESHPFDSRVLLSAGHDGLIIIWDI 794
L P D L S D + IWD+
Sbjct: 318 LSLAFSP-DGNTLYSGAEDKTVKIWDL 343
Score = 104 (41.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 28/101 (27%), Positives = 41/101 (40%)
Query: 473 LGHLSAVFCVLFDKLGEVIVT-GADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNR 529
+GH V V F GE IV+ D I++W G L+ TL G + + D
Sbjct: 141 VGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLADNLGPTTSVVFTPDGS 200
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
+ A D+TI+ W+ T + G I G+ P
Sbjct: 201 QFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTP 241
Score = 102 (41.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNILLAAGTVDKTIRIW 545
G+ + AD+ + + R RDG + TL G + ++S +A D I+ +G D+TIRIW
Sbjct: 115 GQWLAIAADNN-VDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGG-DRTIRIW 172
Query: 546 NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST-STDGCIGFW 591
+ I L + G T V F P +G ++ D I FW
Sbjct: 173 ERASGNLIQTLADNLGPTTSVVFTP---DGSQFITGAIGQDRTIKFW 216
Score = 69 (29.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 22/92 (23%), Positives = 48/92 (52%)
Query: 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
R ++ A+ NF +K W+ + + ++G + E+ + P ++R + +A +G I+I+D
Sbjct: 244 RKLVGAVR-NF-VKAWNLADAKELFSVRGPSLEINTIAVSP-NNRWVATANKEGTIMIFD 300
Query: 794 ILSSKQ----RGYK-WFHNIVEGQGEGALFDG 820
+ + KQ RG++ W ++ L+ G
Sbjct: 301 LANGKQVTTLRGHQGWVLSLAFSPDGNTLYSG 332
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 177 (67.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 159 (61.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 53/179 (29%), Positives = 83/179 (46%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D+TIR W+L+ +S + G G V + V G + GC +Y
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPG---PVRYAGSWVVGLS--PPPKVVGC----RY 255
Query: 594 KLDIDISK----TVFHE-PVMFNERIRPGNAHILCSS--FSPGGLFLATGSGDHHVRVY 645
+ S ++F P F + +RP L S F+P G L +G D +RVY
Sbjct: 256 GAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQDS-LRVY 313
Score = 138 (53.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 1149 EEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 1180
EE +I++P + ++ P+++ +P ++ M
Sbjct: 436 EEYNEIFQPKNSISRTPPRRSEPFPAPPEDDM 467
>TAIR|locus:2158564 [details] [associations]
symbol:NPX1 "nuclear protein X1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009409 "response
to cold" evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0051365 "cellular response to
potassium ion starvation" evidence=IEP] [GO:0010200 "response to
chitin" evidence=RCA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0009737
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0009738 EMBL:AB023035 GO:GO:0009651 GO:GO:0009409
GO:GO:0006351 GO:GO:0051365 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 PROSITE:PS51525 EMBL:BT015056
EMBL:BT021130 IPI:IPI00530216 IPI:IPI00542219 RefSeq:NP_001154792.1
RefSeq:NP_001154793.1 RefSeq:NP_201137.5 UniGene:At.29003
HSSP:Q92831 ProteinModelPortal:Q9FGW9 SMR:Q9FGW9 STRING:Q9FGW9
PaxDb:Q9FGW9 PRIDE:Q9FGW9 EnsemblPlants:AT5G63320.1 GeneID:836452
KEGG:ath:AT5G63320 TAIR:At5g63320 HOGENOM:HOG000242557
InParanoid:Q9FGW9 PhylomeDB:Q9FGW9 Genevestigator:Q9FGW9
Uniprot:Q9FGW9
Length = 1061
Score = 183 (69.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 46/129 (35%), Positives = 63/129 (48%)
Query: 1506 QRRVRPTAVTRAQREAMNQKKLKRPFNWK-----NECREVLETLWVCPDSEPFRKPVDK- 1559
Q + RP + QR +L P ++ EC +L LW PFR PVD
Sbjct: 129 QGKKRPPVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWSHKSGWPFRTPVDPV 188
Query: 1560 -LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIM 1618
L+ PDY ++ PMDLGTIR L Y SP+DF DV+ F NS YN ++ + M
Sbjct: 189 MLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNP-PGNQFHTM 247
Query: 1619 TTRLSEFAE 1627
+S++ E
Sbjct: 248 AQGISKYFE 256
Score = 183 (69.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 46/129 (35%), Positives = 63/129 (48%)
Query: 91 QRRVRPTAVTRAQREAMNQKKLKRPFNWK-----NECREVLETLWVCPDSEPFRKPVDK- 144
Q + RP + QR +L P ++ EC +L LW PFR PVD
Sbjct: 129 QGKKRPPVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWSHKSGWPFRTPVDPV 188
Query: 145 -LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIM 203
L+ PDY ++ PMDLGTIR L Y SP+DF DV+ F NS YN ++ + M
Sbjct: 189 MLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNP-PGNQFHTM 247
Query: 204 TTRLSEFAE 212
+S++ E
Sbjct: 248 AQGISKYFE 256
Score = 44 (20.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 1332 EP-PKEGKEATEPGGSLPVEPEEIQELLYHPRPDEWPQGDRDATCEKIITGLE---EVMG 1387
EP +E + + P+ P EI+ L + E GD++ +++ + EV+
Sbjct: 765 EPVSQEAHDNGDQEDGKPINPNEIERQLENMPEQESGVGDKEEQETEVVDMRKQENEVVD 824
Query: 1388 LSVAEPFLVPVDISQ 1402
+ V E + P+D S+
Sbjct: 825 MGVEE--VHPLDRSE 837
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 1786 SQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSEL 1832
+QEDE SI + + EQ A + ++ E G D + SE+
Sbjct: 950 NQEDEKSINKIEGEEQLANVPEQESRVTEKEEQETGVVDLGEQKSEV 996
Score = 41 (19.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 1782 SASESQEDENSIPETDTTEQPAKK---LKVLYPKRRGQQSEDGSGDNASE 1828
S+S S E +S ++D+ + +K P R ++ + G G + E
Sbjct: 452 SSSSSSESGSSSSDSDSCSSSGSETDSIKASKPTSREEKKQPGVGIDKKE 501
Score = 38 (18.4 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 974 NGESSAATEGTSPSGTA 990
N ESS+++ +S SG++
Sbjct: 446 NNESSSSSSSSSESGSS 462
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 159 (61.0 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 508
SG + +++ I +++ S + GH +V C+ FD ++V+G+ D +KLW G
Sbjct: 328 SGSMDKTIRIWNYRTSECIS--ILHGHTDSVLCLTFDST--LLVSGSADCTVKLWHFSGG 383
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
K + TLRG +G ++ + I L+ +G+ D TI+IW+L+T + H G + +
Sbjct: 384 KRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL 442
Query: 569 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+ L S S DG I W DI+ K V
Sbjct: 443 AD------SRLFSCSLDGTIKQW----DIEKKKCV 467
Score = 140 (54.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 64/252 (25%), Positives = 110/252 (43%)
Query: 462 KYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEI 521
++ RQ ++ GH V C+ + ++ +G+ D I+LW + +A L G S +
Sbjct: 260 RHGRCRQVVLS-GHSDGVMCLQLVR--NILASGSYDATIRLWNLATFQQVALLEGHSSGV 316
Query: 522 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAS 581
+ + D ++ +G++DKTIRIWN +T IS+L GH + + F L S
Sbjct: 317 TCLQFDQCKLI--SGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF------DSTLLVS 368
Query: 582 TSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF-LATGSGDH 640
S D + W + I+ PV IR + S S ++ L T + H
Sbjct: 369 GSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLH 428
Query: 641 ----HVR-VYKMDGVDSPL------GIL---EVEE----HS--DKVDSIQW--SHSHLRF 678
H+ V + DS L G + ++E+ H+ ++ + W + HLR
Sbjct: 429 TFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGV-WEIAADHLRL 487
Query: 679 VSGSRDGTALIW 690
+SG+ DG +W
Sbjct: 488 ISGAHDGVVKVW 499
Score = 70 (29.7 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
IK WD V L GH V+ + + D L+S HDG++ +W+
Sbjct: 456 IKQWDIEKKKCVHTLFGHIEGVWEIAA---DHLRLISGAHDGVVKVWE 500
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 344 DWEGATHSQTLAEVASSHPNVTASF-LP 370
D+ +++ +T++ V PN + F LP
Sbjct: 212 DYPTSSNEETISSVKPPSPNSDSKFFLP 239
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 135 (52.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549
+ T + D K+W +G+L ATL + D++ + LLA + DKT++IW+L T
Sbjct: 505 IFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDT 564
Query: 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+ + L GH + +F +N L S DG I W
Sbjct: 565 FSVMKTLEGHTNAVQRCSF----INKQKQLISCGADGLIKIW 602
Score = 103 (41.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 38/147 (25%), Positives = 69/147 (46%)
Query: 473 LGHLSAVFCVLFDKL---G--EVIVTGADDLLIKLW------RARDGKLLA----TLRGC 517
+GH +AV V + G E ++T ++DL IK W + D +++ T
Sbjct: 431 IGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAH 490
Query: 518 SGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFN 577
+I+ +++ + + A + DKT +IWNL+ + L H+ + V+FC +
Sbjct: 491 EKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYD----K 546
Query: 578 YLASTSTDGCIGFWKYKLD-IDISKTV 603
LA++S D + W LD + KT+
Sbjct: 547 LLATSSGDKTVKIWS--LDTFSVMKTL 571
Score = 89 (36.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
IKIWD +G+ ++ L GH N ++ L + D +++SA DG+ W
Sbjct: 599 IKIWDCSSGECLKTLDGHNNRLWALSTMN-DGDMIVSADADGVFQFW 644
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 148 (57.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 50/212 (23%), Positives = 97/212 (45%)
Query: 474 GHLSAVFCVLFDKLG-EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH S V + G ++ TG+DD +KLW R + T + + ++ + ++ +
Sbjct: 139 GHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN-TYQVLSVTFNDTSDQ 197
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D I++W+L+ I + GH +TG++ L +G +YL S S D + W
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLS---LSADG-SYLLSNSMDNSVRVWD 253
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F + ++L S+S G +A GS D V ++ D
Sbjct: 254 IRPFAPKERCV----KIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIW--DTTTR 307
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ + ++ H+ V+ + + +SGS D
Sbjct: 308 RI-VYKLPGHAGSVNEVAFHPEEPIVLSGSSD 338
Score = 139 (54.0 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 39/143 (27%), Positives = 63/143 (44%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRAR-DGKLLATLRGCSGEISDIAIDNRNIL 532
GH V+C F G + + D LI +W D + ATL+G SG + ++ + L
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSL 113
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW- 591
L + + DKT+ +W+ +T + L GH VN C G + S DG + W
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSF---VNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 592 -KYKLDIDISKTVFHE-PVMFNE 612
+ K + + + V FN+
Sbjct: 171 IRKKASVHTFQNTYQVLSVTFND 193
Score = 79 (32.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 38/176 (21%), Positives = 73/176 (41%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+L +F+ + +G D+ ++V+ + + L I ++ H D V + S +S
Sbjct: 186 VLSVTFNDTSDQIISGGIDNDIKVWDLR--QNKL-IYSMQGHGDSVTGLSLSADGSYLLS 242
Query: 681 GSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
S D + +W + + R +++ H E + + +W A D I
Sbjct: 243 NSMDNSVRVWDIRPFAPKERCVKIFQGNV--HNFEKN--------LLRCSWSA-DGSKIA 291
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
A + + + IWD +V L GH V + HP + ++LS D + I +I
Sbjct: 292 AGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHP-EEPIVLSGSSDKRLYIGEI 346
Score = 37 (18.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 281 PAGETKTKAEKFLMSAMETERLTRLDQELMLL 312
P E A+ +SAM R + L +MLL
Sbjct: 21 PRTELVAAAQSQQLSAMGPPRSSSLQAPIMLL 52
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 167 (63.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 91/378 (24%), Positives = 150/378 (39%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 529
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 530 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 578
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 240 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 293
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638
+ S D W + FH +A L + F A+ S
Sbjct: 294 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 340
Query: 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 341 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDA 395
Query: 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 396 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 813
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 450 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARG 508
Query: 814 EGALFDGKWSPDGTTCAL 831
+ G + DG+ C L
Sbjct: 509 DKV---GASASDGSVCVL 523
Score = 94 (38.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 611
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 176 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 231
Query: 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 670
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 232 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 286
Query: 671 WSHSHLRFVSGSRDGTALIW 690
W+ +S D T +IW
Sbjct: 287 WNKKGNYILSAGVDKTTIIW 306
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 427 MLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 484
Query: 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 485 ---QSG-SLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 525
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 167 (63.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 91/378 (24%), Positives = 150/378 (39%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 529
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 530 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 578
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 240 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 293
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638
+ S D W + FH +A L + F A+ S
Sbjct: 294 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 340
Query: 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 341 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDA 395
Query: 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 396 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 813
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 450 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARG 508
Query: 814 EGALFDGKWSPDGTTCAL 831
+ G + DG+ C L
Sbjct: 509 DKV---GASASDGSVCVL 523
Score = 94 (38.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 611
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 176 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 231
Query: 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 670
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 232 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 286
Query: 671 WSHSHLRFVSGSRDGTALIW 690
W+ +S D T +IW
Sbjct: 287 WNKKGNYILSAGVDKTTIIW 306
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 427 MLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 484
Query: 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 485 ---QSG-SLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 525
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 169 (64.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 91/361 (25%), Positives = 157/361 (43%)
Query: 454 RSLMISSHKYSNLRQHYVNL-GHLSAVF-CVLFDKLGEVIVTGADDLLIKLWRARDGKLL 511
R ++++ + H +++ GH + V C+ D E +VTG DD I ++ + G+L+
Sbjct: 385 RKIIVNRWMDPKFKPHRISVSGHGNKVVTCLQHDD--EKVVTGVDDKCILIYSTQTGQLM 442
Query: 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 571
L G G + A+ L G+ D+T+R+WN++T + GH I ++
Sbjct: 443 KVLEGHEGGVW--ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHP 500
Query: 572 EVNGFN----------Y--LASTSTDGCIGFWKYKLDIDISKTVFH--EPVMFNE---RI 614
V G N Y L + S D I WK + +D S+ E N +
Sbjct: 501 AVIGKNQDGEDIVFPEYPLLITGSRDHNIHVWKLPV-VDDSQDYIETFEGEFDNPYLIAV 559
Query: 615 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-H 673
G+ + S S G + +GS D VRV+ D +D ++ H D+V S H
Sbjct: 560 LSGHTQSV-RSISGYGNIIISGSYDSTVRVW--DLLDDGHCTHVLQGHLDRVYSTAIDFH 616
Query: 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733
S F SGS D +W ++ + + + + + L + D+ + V+ A DA+
Sbjct: 617 SKTCF-SGSMDSNINVWNFETGELKKVLVG-HASLVGLLDLVDD----VLVSAAA-DAT- 668
Query: 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
++IWDA G+L LKGH + E H RV+ +G + ++ +W+
Sbjct: 669 ------------LRIWDAKTGELRSKLKGHGAAITCFE-HD-GLRVV--SGSEKMLKLWN 712
Query: 794 I 794
+
Sbjct: 713 V 713
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 169 (64.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 91/361 (25%), Positives = 157/361 (43%)
Query: 454 RSLMISSHKYSNLRQHYVNL-GHLSAVF-CVLFDKLGEVIVTGADDLLIKLWRARDGKLL 511
R ++++ + H +++ GH + V C+ D E +VTG DD I ++ + G+L+
Sbjct: 385 RKIIVNRWMDPKFKPHRISVSGHGNKVVTCLQHDD--EKVVTGVDDKCILIYSTQTGQLM 442
Query: 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 571
L G G + A+ L G+ D+T+R+WN++T + GH I ++
Sbjct: 443 KVLEGHEGGVW--ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHP 500
Query: 572 EVNGFN----------Y--LASTSTDGCIGFWKYKLDIDISKTVFH--EPVMFNE---RI 614
V G N Y L + S D I WK + +D S+ E N +
Sbjct: 501 AVIGKNQDGEDIVFPEYPLLITGSRDHNIHVWKLPV-VDDSQDYIETFEGEFDNPYLIAV 559
Query: 615 RPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-H 673
G+ + S S G + +GS D VRV+ D +D ++ H D+V S H
Sbjct: 560 LSGHTQSV-RSISGYGNIIISGSYDSTVRVW--DLLDDGHCTHVLQGHLDRVYSTAIDFH 616
Query: 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733
S F SGS D +W ++ + + + + + L + D+ + V+ A DA+
Sbjct: 617 SKTCF-SGSMDSNINVWNFETGELKKVLVG-HASLVGLLDLVDD----VLVSAAA-DAT- 668
Query: 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
++IWDA G+L LKGH + E H RV+ +G + ++ +W+
Sbjct: 669 ------------LRIWDAKTGELRSKLKGHGAAITCFE-HD-GLRVV--SGSEKMLKLWN 712
Query: 794 I 794
+
Sbjct: 713 V 713
>UNIPROTKB|F1NS89 [details] [associations]
symbol:CLEC2D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005634 GO:GO:0005737
GO:GO:0006357 GO:GO:0003682 GO:GO:0006334 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104261 EMBL:AADN02030117 EMBL:AADN02005827
EMBL:AADN02030118 EMBL:AADN02057230 EMBL:AADN02063216
EMBL:AADN02068885 IPI:IPI00597242 Ensembl:ENSGALT00000000212
ArrayExpress:F1NS89 Uniprot:F1NS89
Length = 783
Score = 142 (55.0 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 38/108 (35%), Positives = 54/108 (50%)
Query: 105 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 161
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 55 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 114
Query: 162 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 209
TI+ L + Y + ++D +F N YN+ I +M L +
Sbjct: 115 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEK 161
Score = 142 (55.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 38/108 (35%), Positives = 54/108 (50%)
Query: 1520 EAMNQKKLKRPFNWKNECREV-LETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLG 1576
E N KK R N +V ++ LW + PFR+PVD KL PDY KI+ PMD+G
Sbjct: 55 EVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 114
Query: 1577 TIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSE 1624
TI+ L + Y + ++D +F N YN+ I +M L +
Sbjct: 115 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNK-PTDDIVLMAQTLEK 161
Score = 71 (30.1 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 1422 RFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLL----LRIIKEPNPVD 1477
+ +NR Y DVR + +N K+N P ++V AR + D+ ++ EP
Sbjct: 405 KMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDAS 464
Query: 1478 VPVVYHELL 1486
P V LL
Sbjct: 465 PPSVSAPLL 473
Score = 57 (25.1 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 14/61 (22%), Positives = 33/61 (54%)
Query: 1780 EESASESQEDENSIPETDTTEQPAKKLKVLYPKRRGQQSEDGSGDNASEMSELKQDPLSL 1839
EES+S+ ++DE+ E D ++ + + ++S D + A+ ++EL++ ++
Sbjct: 482 EESSSD-EDDEDEDDEDDDEDESSSE-----SSSESEESSDSEEERANRLAELQEQLRAV 535
Query: 1840 H 1840
H
Sbjct: 536 H 536
Score = 47 (21.6 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 1579 REELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAE 1627
+ ++ +Y +F DV+ +F N YN + M +L + E
Sbjct: 403 QRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHD-VVAMARKLQDVFE 450
Score = 39 (18.8 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 1537 CREVLETLWVCPDSEPFRKPVDKLDHPDY 1565
C L W+ + P P K+++ DY
Sbjct: 383 CSVSLRLDWIQRSAHPLPFPQRKMENRDY 411
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 177 (67.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 136 (52.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH + + + F GE + +G+ D IKLW R + RG S + +
Sbjct: 102 MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW 161
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
LA+ D T+++W+L +S GH G + V F P E LAS S+D I FW
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY----LLASGSSDRTIRFW 216
Score = 109 (43.4 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V + + +W+ +A + + +K+WD G ++ GHT V V+E HP + +L S
Sbjct: 150 VRCLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASG 207
Query: 784 GHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYG 842
D I WD L Q + +EG+ G + ++PDG C + L VYG
Sbjct: 208 SSDRTIRFWD-LEKFQ-----VVSCIEGE-PGPVRSVLFNPDGC-CLYSGCQDSLRVYG 258
Score = 75 (31.5 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 630 GLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALI 689
G LATG D V ++ ++ P I+ + H+ V+S++ + V+GS+ G+ +
Sbjct: 33 GRLLATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 690 W 690
W
Sbjct: 90 W 90
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 1149 EEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 1180
EE +I++P + ++ P+++ +P ++ M
Sbjct: 380 EEYNEIFQPKNSISRTPPRRSEPFPAPPEDDM 411
>UNIPROTKB|G4MRL2 [details] [associations]
symbol:MGG_11716 "Histone acetyltransferase GCN5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000182
InterPro:IPR001487 Pfam:PF00439 Pfam:PF13508 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51186 SMART:SM00297 GO:GO:0000775
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0000124
GO:GO:0005671 GO:GO:0046695 GO:GO:0034401 EMBL:CM001231
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0010484 GO:GO:0043966 GO:GO:0032968
KO:K06062 RefSeq:XP_003710047.1 ProteinModelPortal:G4MRL2
SMR:G4MRL2 EnsemblFungi:MGG_11716T0 GeneID:5049510
KEGG:mgr:MGG_11716 Uniprot:G4MRL2
Length = 411
Score = 164 (62.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 35/74 (47%), Positives = 44/74 (59%)
Query: 120 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFV 179
NE R L L + PF KPV+K + PDY K++ +PMDL TI E L D Y +P D V
Sbjct: 305 NELRRFLYQLQNHQQAWPFLKPVNKDEIPDYYKVITSPMDLSTIEERLEQDLYATPKDLV 364
Query: 180 KDVKRVFHNSRNYN 193
+DVK + N R YN
Sbjct: 365 EDVKLIVSNCRQYN 378
Score = 164 (62.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 35/74 (47%), Positives = 44/74 (59%)
Query: 1535 NECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFV 1594
NE R L L + PF KPV+K + PDY K++ +PMDL TI E L D Y +P D V
Sbjct: 305 NELRRFLYQLQNHQQAWPFLKPVNKDEIPDYYKVITSPMDLSTIEERLEQDLYATPKDLV 364
Query: 1595 KDVKRVFHNSRNYN 1608
+DVK + N R YN
Sbjct: 365 EDVKLIVSNCRQYN 378
>UNIPROTKB|F1P5U7 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 EMBL:AADN02013226 IPI:IPI00580748
Ensembl:ENSGALT00000008777 ArrayExpress:F1P5U7 Uniprot:F1P5U7
Length = 1816
Score = 134 (52.2 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 36/101 (35%), Positives = 54/101 (53%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K++ PMDL TI + + Y++ F+ DV
Sbjct: 1525 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVITNPMDLETICKNISKHKYQNRETFLDDVNL 1584
Query: 1600 VFHNSRNYN--QNKRSK-----IYIMTTRLSEFAEEHLRRL 1633
V NS YN ++ +K + I L+E+ +EHL +L
Sbjct: 1585 VLANSIKYNGPDSQYTKTAQEIVNICYQTLAEY-DEHLTQL 1624
Score = 125 (49.1 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 133 PDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNY 192
P++ PF PV+ DY KI+ PMDL T+RE +R Y S +F + ++ + NS Y
Sbjct: 1410 PNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSREEFREHLELIVKNSATY 1469
Query: 193 NQNKRSKIYIMTTRLSEFAEEHLR 216
N K S I + L + +E L+
Sbjct: 1470 NGPKHSLTQISQSML-DLCDEKLK 1492
Score = 42 (19.8 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 1811 PKRRGQQSEDGSGDNASEMSELKQDP 1836
PK + ED GD A E Q P
Sbjct: 1722 PKTPAPEVEDADGDLADEEEGSTQQP 1747
Score = 38 (18.4 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 97 TAVTRAQ-REAMNQKKLKRPFNWKNE 121
T V + + ++ M+Q ++K P+N N+
Sbjct: 555 TGVIKEEPQQNMSQPEVKDPWNLSND 580
Score = 37 (18.1 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 1747 DPEQPGPSTSYAEPVASTS 1765
DP PGP T + TS
Sbjct: 1645 DPMTPGPYTPQPSDLYDTS 1663
>UNIPROTKB|A4RDD7 [details] [associations]
symbol:TIF34 "Eukaryotic translation initiation factor 3
subunit I" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001235 eggNOG:COG2319
GO:GO:0003743 GO:GO:0043581 KO:K03246 HAMAP:MF_03008
OrthoDB:EOG44QX8Q RefSeq:XP_003717931.1 ProteinModelPortal:A4RDD7
STRING:A4RDD7 EnsemblFungi:MGG_01013T0 GeneID:2674740
KEGG:mgr:MGG_01013 Uniprot:A4RDD7
Length = 341
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 77/322 (23%), Positives = 132/322 (40%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH A+ V F+ G++I + A D I +W A +G+ L T G G I + D + ++
Sbjct: 8 GHERALTQVKFNPDGDLIFSVAKDQHICVWFAHNGERLGTYHGHQGAIWTVDCDPTSTII 67
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD----GCIG 589
A G+ D TI++W ++T + + V F P +G L T G I
Sbjct: 68 ATGSADNTIKLWEIKTGRCLHTWE-FPTAVKRVEFSP---DGTRLLGVTEKRMGHLGTIV 123
Query: 590 FWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 649
KLD+D + E M I + + +S ++ G D V Y
Sbjct: 124 VLDVKLDVDAEQNP--ERAM---TIVCDESKATVAGWSYLAKYIIAGHEDGSVSQYDAKN 178
Query: 650 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 709
D L +++ + ++ +QWS F++ S+D TA K R + + + T
Sbjct: 179 GDQ-LHSVQIHDMGSEIRDLQWSQDRTYFITASKDKTA-----KLVTARDLEV-LKTYPA 231
Query: 710 HTKETSDE-TNKKIKVTMVAWDAS-DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 767
T S T KK V + A+ D +A F+ + + D + ++GH +
Sbjct: 232 DTPLNSAVITPKKDYVILGGGQAAMDVTTTSARQGKFEARFYHKIFEDEIGRVRGHFGPL 291
Query: 768 FVLESHPFDSRVLLSAGHDGLI 789
+ + P + + S G DG +
Sbjct: 292 NYVAAEP-NGKGYASGGEDGYV 312
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 124 (48.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 42/183 (22%), Positives = 75/183 (40%)
Query: 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIA 525
L +H+ GH + + F G I T + D + LW S ++ +A
Sbjct: 10 LERHFT--GHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVA 67
Query: 526 IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTD 585
+ L+A+ D+T++IW + V H + V+F + G + + + S D
Sbjct: 68 WSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDF---DSTG-HLMLTASDD 123
Query: 586 GCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
W+ +++ F F ++ N + + FSP G +AT S D VR+Y
Sbjct: 124 KSAKIWR------VARRQFVSS--FAQQ----NNWVRSAKFSPNGKLVATASDDKSVRIY 171
Query: 646 KMD 648
+D
Sbjct: 172 DVD 174
Score = 94 (38.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 44/191 (23%), Positives = 82/191 (42%)
Query: 454 RSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLAT 513
R++ I K + +V H AV V FD G +++T +DD K+WR + +++
Sbjct: 82 RTVKIWEPKLRGVSGEFV--AHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSS 139
Query: 514 LRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEV 573
+ + L+A + DK++RI+++ + + + + + P
Sbjct: 140 FAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPW-- 197
Query: 574 NGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL 633
G N LA GC + K+ D+S + + ++ P N +F P G FL
Sbjct: 198 -G-NMLAVAL--GCN---RIKI-FDVSGSQLLQ--LYVVHSAPVND----VAFHPSGHFL 243
Query: 634 ATGSGDHHVRV 644
+GS D +R+
Sbjct: 244 LSGSDDRTIRI 254
Score = 90 (36.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 625 SFSPGGLFLATGSGDHHVRVYKM-DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 683
+F P G FL +GS D +R+ + +G P I + H+D V+++ +S +F +G
Sbjct: 235 AFHPSGHFLLSGSDDRTIRILDLLEG--RP--IYTLTGHTDAVNAVAFSRDGDKFATGGS 290
Query: 684 DGTALIWYYKCSQWRFIRLDMNTCLPHTK-ETSDETNKK 721
D L+W + + + + L + E+S ++K+
Sbjct: 291 DRQLLVWQSNLHTYDASQFEAKSALASSSCESSGVSSKQ 329
Score = 90 (36.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/90 (28%), Positives = 37/90 (41%)
Query: 506 RDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITG 565
RD L G SG I+ + +A + D T+ +WNL A H + G
Sbjct: 6 RDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNG 65
Query: 566 VNFCPLEVNGFNYLASTSTDGCIGFWKYKL 595
V + P G N +AS D + W+ KL
Sbjct: 66 VAWSP---KG-NLVASAGHDRTVKIWEPKL 91
Score = 57 (25.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 724 VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSA 783
V VA+ S ++++ + + I+I D G + L GHT+ V + + D +
Sbjct: 231 VNDVAFHPSGHFLLSGSD-DRTIRILDLLEGRPIYTLTGHTDAVNAV-AFSRDGDKFATG 288
Query: 784 GHDGLIIIW 792
G D +++W
Sbjct: 289 GSDRQLLVW 297
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 147 (56.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 48/170 (28%), Positives = 74/170 (43%)
Query: 463 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS 522
+S ++ GH +V CV I T + D IK+W A +L TL G IS
Sbjct: 41 HSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGIS 100
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAST 582
+ + LA+ + DKTIRIW+ + + L GH ++ ++F PL G L S
Sbjct: 101 QVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPL---G-TLLVSG 156
Query: 583 STDGCIGFWKYKLDIDISKTVFH-EPVMFNERIRPGNAHILCSSFSPGGL 631
S D + W + + H EP++ G LC++ S G+
Sbjct: 157 SWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGT---LCATASYDGM 203
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 50/180 (27%), Positives = 78/180 (43%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G ++ +++ +A + D TI+IW+ T L GH I+ V +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWA--- 105
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCS-SFSPGGL 631
G YLAS S D I W ++ + R G+ + + S F+P G
Sbjct: 106 -TGSKYLASASDDKTIRIWDFEKRCSV-------------RCLKGHTNYVSSIDFNPLGT 151
Query: 632 FLATGSGDHHVRVYKM-DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
L +GS D VR++ + DG + L +L HS+ + S+ S + S DG A IW
Sbjct: 152 LLVSGSWDETVRIWNLQDG--TCLRMLPA--HSEPIISVSISADGTLCATASYDGMARIW 207
Score = 65 (27.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 25/117 (21%), Positives = 50/117 (42%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
HS+ + S+ S + S DG A IW Q CL K + N
Sbjct: 179 HSEPIISVSISADGTLCATASYDGMARIWDVLSGQ----------CL---KTLVEPIN-- 223
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR 778
+ ++ + + + ++++ + N N QI++WD +V++ H N + + + S+
Sbjct: 224 VPLSNLQFTENRKYLLVS-NLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSK 279
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/214 (23%), Positives = 102/214 (47%)
Query: 474 GHLSAVFCVLFDKLGE-VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH + V V + G+ ++ +G+DD IK+W AR TL +++ + +
Sbjct: 138 GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES-PFQVTAVCFGDTGEQ 196
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ +G +D ++IW+++ A + L GH ITG++ P G +++ + + D + W
Sbjct: 197 VISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSP---EG-DFILTNAMDNTLRVWD 252
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDS 652
+ + V +F ++L ++SPG + +GS D HV ++ V++
Sbjct: 253 VRPYAPGERCV----KVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWD---VNT 305
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT 686
+ ++ H+ V+++ +S +SGS D T
Sbjct: 306 RRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKT 339
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
V V F GE +++G D +K+W R +L LRG S I+ +++ + +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 539 DKTIRIWNLQTLAP----ISVLVGHQ-GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
D T+R+W+++ AP + V GHQ + C G + + S S D + W
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP-GSDKITSGSADRHVYIW-- 301
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
D++ + ++ P N + FSP + +GS D + + ++D
Sbjct: 302 --DVNTRRILYKLP--------GHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
Score = 95 (38.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 34/141 (24%), Positives = 58/141 (41%)
Query: 454 RSLMISS-HKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRA-RDGKL 510
++L+ S + SNL+ + L GH +F F GE++++ D I +W+ D +
Sbjct: 31 KALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCEN 90
Query: 511 LATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
+ + G SG + + + + DKT+ W++ T GH + V
Sbjct: 91 VMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSR 150
Query: 571 LEVNGFNYLASTSTDGCIGFW 591
G L S S D I W
Sbjct: 151 ---RGQQLLCSGSDDRTIKIW 168
Score = 84 (34.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 40/164 (24%), Positives = 70/164 (42%)
Query: 679 VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
V GSR G L+ S R I++ + H T + +VT V + + VI+
Sbjct: 146 VQGSRRGQQLLC--SGSDDRTIKI-WDARKKHAAHTLESP---FQVTAVCFGDTGEQVIS 199
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI--LS 796
+ ++KIWD ++ L+GH++ + + P +L +A D + +WD+ +
Sbjct: 200 G-GIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNA-MDNTLRVWDVRPYA 257
Query: 797 SKQRGYKWFHNIVEGQGEGALFDGKWSP--DGTTCALTDSYGHL 838
+R K F + E L WSP D T D + ++
Sbjct: 258 PGERCVKVFQGH-QHNFEKNLLRCAWSPGSDKITSGSADRHVYI 300
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 166 (63.5 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 104/417 (24%), Positives = 164/417 (39%)
Query: 435 KVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTG 494
+ H+ N + E G + I S K + LR GH S VF ++ + +++ +G
Sbjct: 193 RAHSVNNHAKPMEIDGEVD----IPSSKATVLR------GHESEVFICAWNPVSDLLASG 242
Query: 495 ADDLLIKLWRARD----GKLLATLRGCSGE-------ISDI-AID-NRN-ILLAAGTVDK 540
+ D ++W + G LR C E D+ ++D N N LLA G+ D
Sbjct: 243 SGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDG 302
Query: 541 TIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 599
RIW LA S L H+G I + + G NY+ S D W
Sbjct: 303 FARIWTEDGNLA--STLGQHKGPIFALKW---NRKG-NYILSAGVDKTTIIWDAHTGEAK 356
Query: 600 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 659
+ FH +A L + F A+ S D + V ++ G D P +
Sbjct: 357 QQFPFH------------SAPALDVDWQNNMTF-ASCSTDMCIHVCRL-GCDRP--VKTF 400
Query: 660 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN 719
+ H+++V++I+W S + S S D T IW K Q I D+ H KE T
Sbjct: 401 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QEVCIH-DLQA---HNKEIY--TI 452
Query: 720 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 779
K + + ++ + +F+ +++WD G L H V+ + P D R
Sbjct: 453 KWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSP-DGRY 511
Query: 780 LLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVE----GQGEGALFDGKWSPDGTTCAL 831
L S D + IW+ S Y+ I E +G+ G + DG+ C L
Sbjct: 512 LASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKV---GASASDGSVCVL 565
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 55/226 (24%), Positives = 101/226 (44%)
Query: 466 LRQHYVNLGHLSAVFCVLFDKLGEVIVTG-ADDLLIKLWRARDGKLLATLRGCSGEISDI 524
+R+H GH V + K+G ++T +DD +K+W +R + T+ ++ +
Sbjct: 128 IRKHK---GHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEE-KYPLTAV 183
Query: 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 584
AI + + G +D I+IW+L+ VL GH+ IIT + + +G + L S S
Sbjct: 184 AIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSL---AISKDGSSLL-SNSM 239
Query: 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644
D + + D+ + + +F I ++L ++S F+ GS D +V V
Sbjct: 240 DNTVRIF----DVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYV 295
Query: 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV-SGSRDGTALI 689
+ G L + + H V+ + + H H + S S D T +
Sbjct: 296 WSATG---DLRYV-LPGHEGSVNHVDF-HPHQDIILSCSSDRTIFL 336
Score = 117 (46.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRA-RDGKLLATLRGCSGEISDIAIDNRNIL 532
GH + V FD G +G D I LW D K L GC G I+D+ + +
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRV 107
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ + D + W+ + I GH G++ ++ L+V G L S S D + W
Sbjct: 108 VYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDV--LKV-GSELLTSVSDDCTMKVWD 164
Query: 593 YKLDIDISKTV 603
+ D KT+
Sbjct: 165 SRSK-DCIKTI 174
Score = 95 (38.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 32/102 (31%), Positives = 44/102 (43%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI--LSSKQRGYK 803
IKIWD N VLKGH + + L D LLS D + I+D+ +S QR +
Sbjct: 201 IKIWDLRNNHCSHVLKGHKDIITSLAISK-DGSSLLSNSMDNTVRIFDVKPFASAQRQLQ 259
Query: 804 WFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGG 845
F + GQ E L WS + S ++ V+ G
Sbjct: 260 IFEGAIHGQ-EHNLLGVAWSRNSRFVGAGSSDKNVYVWSATG 300
Score = 85 (35.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYK--CSQWRFIRLDMNTCLPHTKETSDETN 719
H D + S+ S +S S D T I+ K S R +++ H +E +
Sbjct: 218 HKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAI--HGQEHN---- 271
Query: 720 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 779
+ VAW + R+V A + + + +W A GDL VL GH V ++ HP +
Sbjct: 272 ----LLGVAWSRNSRFV-GAGSSDKNVYVWSA-TGDLRYVLPGHEGSVNHVDFHPHQD-I 324
Query: 780 LLSAGHDGLIIIWDI 794
+LS D I + ++
Sbjct: 325 ILSCSSDRTIFLGEL 339
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 56/219 (25%), Positives = 97/219 (44%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS--DIAIDNRNIL 532
H S + C ++ + I+TG+ D LW G+LL + G SG++ D+A +
Sbjct: 157 HTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNT 216
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+G+ D+ IW++++ + GHQ + V F P G + +A+ S D +
Sbjct: 217 FVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPC---G-DAIATGSDDSSCRLYD 272
Query: 593 YKLDIDISKTVF-HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVD 651
+ D +++ VF E ++F + FS G L G D+ V ++ D +
Sbjct: 273 MRADREVA--VFAKESIIFG---------VNSVDFSVSGRLLFAGYNDYTVNLW--DTLK 319
Query: 652 SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
S L + H +KV +Q S +GS D T +W
Sbjct: 320 SERVCL-LYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 144 (55.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 63/232 (27%), Positives = 97/232 (41%)
Query: 438 NTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNL-GHLSAVFCVLFDKLGEVIVTGAD 496
N+ V++S G L +++ + S L + L GH VF V FD + I +G+
Sbjct: 31 NSAAVVKSSGQDGTLVQAVP----RTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSM 86
Query: 497 DLLIKLWRARDG-KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555
D I LW + L G G I D+ + + + + D T+ W++++ I
Sbjct: 87 DRSILLWNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRR 146
Query: 556 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW--KYKLDIDISKTVFHEPVMFNER 613
+GH+ +I V + G L S S DG +G W + K ID +T P+ +
Sbjct: 147 YIGHEEVINSVE---ISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETEL--PITAVAQ 201
Query: 614 IRPGNAHILCSSFSPGGLFLATGSGDHHVR--VYKMDGVDSPLGILEVEEHS 663
GN FS GG+ A D + VY M G + LEV S
Sbjct: 202 SEAGN-----EVFS-GGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDS 247
Score = 121 (47.7 bits), Expect = 0.00097, P = 0.00097
Identities = 49/220 (22%), Positives = 97/220 (44%)
Query: 473 LGHLSAVFCVLFDKLG-EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+GH + V K G E++V+ +DD + +W R + + L I+ +A
Sbjct: 148 IGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLE-TELPITAVAQSEAGN 206
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
+ +G +D I +W+++ A + + GH IT + P L S S D + W
Sbjct: 207 EVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSP----DSQTLLSNSFDSTVRTW 262
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPG-NAHILCSSFSPGGLFLATGSGDHHVRVYKMDGV 650
+ + T H + + G +++ +S++P G +A GSGD V V+ D
Sbjct: 263 DIR---PFAPTNRH--IRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVW--DFK 315
Query: 651 DSPLGILEVEEHSDKVDSIQWS-HSHLRFVSGSRDGTALI 689
+ + ++ H V+ ++++ ++ VS S D ++
Sbjct: 316 TGKI-LYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLML 354
Score = 66 (28.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 29/138 (21%), Positives = 58/138 (42%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE--TSDETN 719
H D + S++ S +S S D T W D+ P + T D
Sbjct: 234 HMDTITSLEVSPDSQTLLSNSFDSTVRTW------------DIRPFAPTNRHIRTYDGAP 281
Query: 720 KKIKVTMV--AWD-ASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFD 776
++ ++ +W+ A D+ I A + + + +WD G ++ L GH V + P +
Sbjct: 282 VGLEKNLIRASWNPAGDK--IAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNN 339
Query: 777 SRVLLSAGHDGLIIIWDI 794
+++SA D +++ ++
Sbjct: 340 EPIIVSASSDRNLMLGEL 357
>CGD|CAL0003781 [details] [associations]
symbol:BDF1 species:5476 "Candida albicans" [GO:0000812 "Swr1
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0001094 "TFIID-class transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0090054 "regulation of chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0031452 "negative
regulation of heterochromatin assembly" evidence=IEA] [GO:0009301
"snRNA transcription" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:1900051 "positive regulation of histone exchange"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 CGD:CAL0003781
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 KO:K11684 EMBL:AACQ01000063 EMBL:AACQ01000062
RefSeq:XP_716816.1 RefSeq:XP_716876.1 ProteinModelPortal:Q5A4W8
STRING:Q5A4W8 GeneID:3641493 GeneID:3641592 KEGG:cal:CaO19.8593
KEGG:cal:CaO19.978 Uniprot:Q5A4W8
Length = 732
Score = 134 (52.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 1552 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 1609
PF PVD L+ P+Y++IV PMDLGTI+ +L + YE+ DF KDV+ VF N +N
Sbjct: 410 PFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYENADDFEKDVRLVFKNCYLFNP 469
Query: 1610 NKRSKIYIMTTRL 1622
+ + + +M RL
Sbjct: 470 -EGTDVNMMGHRL 481
Score = 134 (52.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 137 PFRKPVDK--LDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQ 194
PF PVD L+ P+Y++IV PMDLGTI+ +L + YE+ DF KDV+ VF N +N
Sbjct: 410 PFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYENADDFEKDVRLVFKNCYLFNP 469
Query: 195 NKRSKIYIMTTRL 207
+ + + +M RL
Sbjct: 470 -EGTDVNMMGHRL 481
Score = 86 (35.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 134 DSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRN 191
++ PF PVD KL+ P Y + PMDL TI ++ YE V D + N +
Sbjct: 230 EAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEDVSQVVDDFNLMVKNCKK 289
Query: 192 YNQNKRSKIYIMTTRL 207
+N + + I M T +
Sbjct: 290 FN-GEAAGISKMATNI 304
Score = 52 (23.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 1609 QNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKK 1647
Q ++I M L E +EHL++L + + K K+ +K
Sbjct: 531 QVMENQIIRMRKELDELKKEHLKKLREQQAARKKKKQQK 569
Score = 43 (20.2 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 741 NFNFQIKIWDAFNGDLVQVLKGHTN 765
+FN +K FNG+ + K TN
Sbjct: 279 DFNLMVKNCKKFNGEAAGISKMATN 303
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 145 (56.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V+ F G V+G D + +LW + L G +++ + +
Sbjct: 343 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 402
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A G+ D+T+R+W++ + + GH+G I + F P NG +LA+ +TDG + W
Sbjct: 403 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP---NG-RFLATGATDGRVLLW-- 456
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
DI H +M E ++ + FS G LA+GS D+ VR++
Sbjct: 457 ----DIG----HG-LMVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 498
Score = 128 (50.1 bits), Expect = 0.00033, P = 0.00033
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 456 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 515
L + H Y LR + GHL+ V C F + TG+ D ++LW +G +
Sbjct: 371 LWATDH-YQPLR---IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 426
Query: 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575
G G I + LA G D + +W++ + L GH + + F +G
Sbjct: 427 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR---DG 483
Query: 576 FNYLASTSTDGCIGFW 591
LAS S D + W
Sbjct: 484 -EILASGSMDNTVRLW 498
Score = 125 (49.1 bits), Expect = 0.00070, P = 0.00070
Identities = 43/172 (25%), Positives = 70/172 (40%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V+ F +++ ++D ++LW + L +G + + D
Sbjct: 301 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 360
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G D+ R+W P+ + GH + F P N NY+A+ S D + W
Sbjct: 361 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP---NS-NYVATGSADRTVRLW-- 414
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
D+ V +F G H L +FSP G FLATG+ D V ++
Sbjct: 415 --DVLNGNCVR----IFTGH--KGPIHSL--TFSPNGRFLATGATDGRVLLW 456
Score = 119 (46.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 495 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 553
+DD+L ++ + L L G SG + + +RN LL++ D T+R+W+LQT +
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE-DGTVRLWSLQTFTCL 338
Query: 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 612
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 339 VGYKGHNYPVWDTQFSPY---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 385
Query: 613 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
+ A + C+ F P ++ATGS D VR++
Sbjct: 386 HL----ADVNCTRFHPNSNYVATGSADRTVRLW 414
Score = 98 (39.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
+++WD NG+ V++ GH + L P + R L + DG +++WDI
Sbjct: 411 VRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDI 458
Score = 83 (34.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
T K + + + + R++ T + ++ +WD +G +V LKGHT+ V L D
Sbjct: 426 TGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DG 483
Query: 778 RVLLSAGHDGLIIIWDILSS 797
+L S D + +WD + +
Sbjct: 484 EILASGSMDNTVRLWDAVKA 503
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 119 (46.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 489 EVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQ 548
++ G +D I+LW +R ++ + G I+ +A DN + LA+G+ D I +W+L
Sbjct: 86 DIFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWDLI 145
Query: 549 TLAPISVLVGHQGIITGVNFC-P-LEV-N--GFN----YLASTSTDGCIGFW 591
+ + L GH IT ++F P LE+ N G + +L +T D I W
Sbjct: 146 SEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVW 197
Score = 104 (41.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 620 HILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFV 679
+ LCS+F PG + G+ D + ++ D S L + ++ H V S+Q V
Sbjct: 466 YALCSAFLPGDKIVVVGNKDGELEIF--DIASSTL-LDTIKAHDGPVWSLQVHPDGKSLV 522
Query: 680 SGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNK-KIKVTMVAWDASDRWVIT 738
SGS D +A W ++ Q T P + T K + V + R +
Sbjct: 523 SGSADKSAKFWNFQVVQEEIPGTKRTT--PRLRLVHTRTLKVSDDILSVRFSPDARLLAV 580
Query: 739 AINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESH-PFDSRVLLSAGHDGLIIIWDI 794
A+ N +K++ FN L L + +++ VL +DS+++++ D + +W +
Sbjct: 581 ALLDN-TVKVF--FNDSLKLFLNLYGHKLPVLNMDISWDSKLIVTCSADKTVRLWGL 634
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 164 (62.8 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 91/378 (24%), Positives = 150/378 (39%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 529
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 181 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 240
Query: 530 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 578
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 241 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 294
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638
+ S D W + FH +A L + F A+ S
Sbjct: 295 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 341
Query: 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 342 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDT 396
Query: 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 397 CVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLH 450
Query: 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE----GQG 813
L H V+ + P D + L S D + IW+ S S Y+ I E +G
Sbjct: 451 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARG 509
Query: 814 EGALFDGKWSPDGTTCAL 831
+ G + DG+ C L
Sbjct: 510 DKV---GASASDGSVCVL 524
Score = 94 (38.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 611
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 177 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 232
Query: 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 670
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 233 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 287
Query: 671 WSHSHLRFVSGSRDGTALIW 690
W+ +S D T +IW
Sbjct: 288 WNKKGNYILSAGVDKTTIIW 307
Score = 86 (35.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 428 MLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 485
Query: 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 486 ---QSG-SLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 526
>DICTYBASE|DDB_G0268084 [details] [associations]
symbol:wdr91 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0268084
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AAFI02000003
RefSeq:XP_647541.1 ProteinModelPortal:Q55FJ2
EnsemblProtists:DDB0233074 GeneID:8616348 KEGG:ddi:DDB_G0268084
OMA:MKQQLQF Uniprot:Q55FJ2
Length = 766
Score = 167 (63.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 62/231 (26%), Positives = 100/231 (43%)
Query: 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524
N+ V H SA+ F G I + + D ++LW T+ C E++ +
Sbjct: 453 NIESQEVCTSHSSAITRCKFLSNGSKIASSSIDGTVRLWNVGFSSRQTTIY-CLSEVASL 511
Query: 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE-----VNGFNYL 579
+NR+ LL GT+D I+IWN T +G I T + F +E NG ++
Sbjct: 512 EWENRSKLLLCGTIDSKIKIWNSLT----DKAIGD--INTSIEFPRVEDIACNPNGNSFA 565
Query: 580 ASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGD 639
S+ +G Y ++ KT E++ A I SF+ G L+TG D
Sbjct: 566 TSSINNGRTDGVVYTWNLRTLKT--------EEKLSSSGAVINSMSFNSTGTLLSTGCVD 617
Query: 640 HHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+R++ + SP I + HS+++ S+Q+S R S +DG W
Sbjct: 618 GTIRIFDIKS-GSP--IAGWQAHSNEILSVQFSSDENRLYSLGKDGKLYQW 665
Score = 52 (23.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 751 AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799
+FN + L G N+ +L + S +L +GH G ++ D SS Q
Sbjct: 693 SFNHNQSSFLVGTNNKFALLYNIDQSSPILQISGHTGPVVTCDWNSSSQ 741
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 164 (62.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/153 (26%), Positives = 67/153 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V C+ + G V+VTG D ++W R G+ + L G G + + +
Sbjct: 393 GHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHI 452
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A G+ D T +IW+L+ P+ + H +I+ V + E F L + S D W
Sbjct: 453 ATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKY-QQECGSF--LVTCSYDSTTKIWSN 509
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSF 626
K + H+ + + I P + +I +SF
Sbjct: 510 KTWQPLKTLQGHDNKVISVDIAPNSQYIATTSF 542
Score = 146 (56.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 57/226 (25%), Positives = 97/226 (42%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI------ 526
+G V F + +++T + L KLW D +L TLRG + + +A+
Sbjct: 258 VGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKA 317
Query: 527 DNRNIL-LAAGTVDKTIRIWNLQTLAPISVLVGHQGI-ITGVNFCPLEVNGFNYLASTST 584
D N++ +A+G D +++W I+ + GH ++ V F P +G +LA+
Sbjct: 318 DEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHP---SG-RFLATACY 373
Query: 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644
D W D++ V H+ +P H C S+ G L TG D RV
Sbjct: 374 DSSWRLW----DLEQKTEVLHQ----EGHAKP--VH--CLSYHSDGSVLVTGGLDAFGRV 421
Query: 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ + + I+ +E H V + +S + +GS+D T IW
Sbjct: 422 WDLR---TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIW 464
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 159 (61.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRN 530
V +GHLS V CV F + TG+ D ++LW G+ + + G G +S +A
Sbjct: 529 VFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACG 588
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
LA+G+VD I IW+L + ++ L+ H +T + F +G LA+ D +
Sbjct: 589 RYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSR---DG-TVLAAAGLDNNLTL 644
Query: 591 WKY-KLDID-ISK--TVFH 605
W + K+ D IS TV H
Sbjct: 645 WDFHKVTEDYISNHITVSH 663
Score = 136 (52.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ F ++++ ++D I+LW + T RG + D+
Sbjct: 447 MGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYY 506
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ + DKT R+W + + V VGH + V F P N NY+A+ S+D + W
Sbjct: 507 FVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHP---NS-NYVATGSSDRTVRLWD 562
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
+ H+ G+ L +FS G +LA+GS DH++ ++ +
Sbjct: 563 NMTGQSVRLMTGHK----------GSVSSL--AFSACGRYLASGSVDHNIIIWDL 605
Score = 118 (46.6 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 47/167 (28%), Positives = 75/167 (44%)
Query: 485 DKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI-DNRNILLAAGTVDKTIR 543
D L E+ AD + +++ R G++ +L G +G + A N+LL+ D TIR
Sbjct: 418 DSLRELDKESAD-INVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSE-DSTIR 475
Query: 544 IWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTV 603
+W+L T + + GH + V F P +G+ Y S S D W D + + V
Sbjct: 476 LWSLLTWSCVVTYRGHVYPVWDVRFAP---HGY-YFVSCSYDKTARLWA--TDSNQALRV 529
Query: 604 FHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY-KMDG 649
F + + + C F P ++ATGS D VR++ M G
Sbjct: 530 FVGHL----------SDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG 566
Score = 101 (40.6 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
T K V+ +A+ A R++ + + + I IWD NG LV L HT+ V + + D
Sbjct: 573 TGHKGSVSSLAFSACGRYLASG-SVDHNIIIWDLSNGSLVTTLLRHTSTVTTI-TFSRDG 630
Query: 778 RVLLSAGHDGLIIIWD 793
VL +AG D + +WD
Sbjct: 631 TVLAAAGLDNNLTLWD 646
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 164 (62.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 103/417 (24%), Positives = 164/417 (39%)
Query: 435 KVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTG 494
+ H+ N + E G + I S K + LR GH S VF ++ + +++ +G
Sbjct: 201 RAHSVNNHAKPMEIDGEVE----IPSSKATVLR------GHESEVFICAWNPVSDLLASG 250
Query: 495 ADDLLIKLWRARD----GKLLATLRGCSGE-------ISDI-AID-NRN-ILLAAGTVDK 540
+ D ++W + G LR C E D+ ++D N N LLA G+ D
Sbjct: 251 SGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDG 310
Query: 541 TIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDI 599
RIW LA S L H+G I + + G NY+ S D W
Sbjct: 311 FARIWTEDGNLA--STLGQHKGPIFALKW---NRKG-NYILSAGVDKTTIIWDAHTGEAK 364
Query: 600 SKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV 659
+ FH +A L + F A+ S D + V ++ G D P +
Sbjct: 365 QQFPFH------------SAPALDVDWQNNTTF-ASCSTDMCIHVCRL-GCDRP--VKTF 408
Query: 660 EEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETN 719
+ H+++V++I+W S + S S D T IW K Q I D+ H KE T
Sbjct: 409 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QEVCIH-DLQA---HNKEIY--TI 460
Query: 720 KKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 779
K + + ++ + +F+ +++WD G L H V+ + P D +
Sbjct: 461 KWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSP-DGKY 519
Query: 780 LLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVE----GQGEGALFDGKWSPDGTTCAL 831
L S D + IW+ S Y+ I E +G+ G + DG+ C L
Sbjct: 520 LASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKV---GASASDGSVCVL 573
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 163 (62.4 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 99/444 (22%), Positives = 175/444 (39%)
Query: 408 SLAKSVLSSYDYIARQHGTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLR 467
++AK+ + I++Q+ + N + + + + R + I +K + LR
Sbjct: 117 AMAKAATMTPAAISQQNPPKIREATVNGEENGAHEINNHSKPMEIDRDVEIPPNKATVLR 176
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGE--- 520
GH S VF ++ + +++ +G+ D ++W + G LR C E
Sbjct: 177 ------GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWH 230
Query: 521 -------ISDIAIDNRNILLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLE 572
++ + ++ LLA G+ D RIW LA S L H+G I + +
Sbjct: 231 DVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLA--STLGQHKGPIFALKW---N 285
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
G NY+ S D W + FH +A L + F
Sbjct: 286 KKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF 332
Query: 633 LATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYY 692
+ G+ D + V ++ G D P + + H+++V++I+W S + S S D T IW
Sbjct: 333 ASCGT-DMCIHVCRL-GCDLP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 388
Query: 693 KCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAF 752
K Q + D+ H+KE T K + + ++ + +F+ +++WD
Sbjct: 389 K--QDACVH-DLQA---HSKEIY--TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE 440
Query: 753 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS-SKQRGYKWFHNIVE- 810
G L H V+ + P D + L S D + IW+ S S Y+ I E
Sbjct: 441 QGVCTHTLTKHQEPVYSIAFSP-DGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEV 499
Query: 811 ---GQGEGALFDGKWSPDGTTCAL 831
+G+ G + DG+ C L
Sbjct: 500 CWNARGDKV---GASASDGSVCVL 520
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 177 (67.4 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 163 (62.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
A+G+ D+TIR W+L+ +S + G G + + F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNP 241
Score = 138 (53.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 39 (18.8 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 6/32 (18%), Positives = 19/32 (59%)
Query: 1149 EEVPDIYKPSDWLAEVVPKKAPYYPQMGDEVM 1180
E+ +I++P + ++ P+++ +P ++ M
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFPAPPEDDM 411
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 157 (60.3 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 50/196 (25%), Positives = 93/196 (47%)
Query: 452 LSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL 511
LS+ + SH + L V G LS C +V+ GAD ++ R R+ +++
Sbjct: 205 LSKYRQVGSH--AGLHSASVP-GILSLDLCPT--DTNKVLTGGADKNVVVFDR-REEQIV 258
Query: 512 ATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPL 571
ATL+G + ++S + ++ + + D TIR+W++ + V+ H+ +TG++ L
Sbjct: 259 ATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLS---L 315
Query: 572 EVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL 631
G +YL S+S D +W + DI + V+ + C+ F P GL
Sbjct: 316 HATG-DYLLSSSEDQ---YWAFS-DIQTGR------VLTKVTDETAGCALTCAQFHPDGL 364
Query: 632 FLATGSGDHHVRVYKM 647
TG+GD ++++ +
Sbjct: 365 IFGTGTGDSQIKIWDL 380
Score = 56 (24.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 745 QIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSK 798
QIKIWD V GH+ V + + + L + D + +WD+ K
Sbjct: 374 QIKIWDLKERTNVANFPGHSGPVTAI-AFSENGYYLATGAQDSSLKLWDLRKLK 426
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 161 (61.7 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 61/239 (25%), Positives = 105/239 (43%)
Query: 474 GHLSAVFCVLF---DKLGEVIVTGADDLLIKLWR--ARDGKLLAT--LRGCSGEISDIAI 526
GH V V + D L V++T + D + LW + K+ A RG +G + IA+
Sbjct: 138 GHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSVDTIAV 197
Query: 527 DNRNILLAAGTVDKTIRIWNL-------QTLAPISVLVGHQGIITGVNFCPL-EVNGFNY 578
D +G+ DK ++IW+ + P + G+ PL ++G N
Sbjct: 198 DPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLTRTPLMTLSGHNE 257
Query: 579 LAST-----STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL 633
S+ + + C W + + + ++T + + ++ C S+SP L
Sbjct: 258 AVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLSGSKV------FNCISYSPLCRRL 311
Query: 634 ATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQW--SHSHLRFVSGSRDGTALIW 690
A+GS D HVR++ D L +L + H+ V +++W SH H + VSGS D +W
Sbjct: 312 ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEH-QLVSGSLDNVVKLW 369
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 177 (67.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 38 (18.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 5/25 (20%), Positives = 16/25 (64%)
Query: 1149 EEVPDIYKPSDWLAEVVPKKAPYYP 1173
E+ +I++P + ++ P+++ +P
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFP 404
Score = 38 (18.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 1587 YESPIDFVKDVKRVFHNSRNYNQNKRSK 1614
YE P +RV HNS + ++ S+
Sbjct: 337 YERPSTTCSKPQRVKHNSESERRSPSSE 364
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 177 (67.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 38 (18.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 5/25 (20%), Positives = 16/25 (64%)
Query: 1149 EEVPDIYKPSDWLAEVVPKKAPYYP 1173
E+ +I++P + ++ P+++ +P
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFP 404
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 140 (54.3 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 78/303 (25%), Positives = 122/303 (40%)
Query: 515 RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVN 574
+G I+ + LA G+ D + +W+L+ A VGH+ +IT V F PL
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPL--- 71
Query: 575 GFNYLASTSTDGCIGFW---------KYKLDIDISKTV-FHEPVMFNERIRPGNAHILCS 624
G N LAS S D I W ++K ++V F F + + +
Sbjct: 72 G-NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 625 SFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRD 684
+ L+ + H VR K SP G L V DK I W ++ + V+ D
Sbjct: 131 MYRQRFLY-SLYRHTHWVRCAKF----SPDGRLIVSCSEDKTIKI-WDTTNKQCVNNFSD 184
Query: 685 GTALIWYYKCSQWRFIRLDMN-TCLP-----HTKETSD-ETNKKIK--------VTMVAW 729
F+ + N TC+ HT + D NK ++ V V++
Sbjct: 185 FVGFA--------NFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 730 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 789
S ++ITA + + +KI D G L+ L+GHT VF + S + S G D +
Sbjct: 237 HPSGNYLITASS-DGTLKILDLLEGRLIYTLQGHTGPVFTV-SFSKGGELFTSGGADAQV 294
Query: 790 IIW 792
++W
Sbjct: 295 LLW 297
Score = 123 (48.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 45/189 (23%), Positives = 80/189 (42%)
Query: 457 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG 516
M SS + L +++ GH +A+ V F G+ + TG+ D + LW R G
Sbjct: 1 MASSPEDPVLERYFK--GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVG 58
Query: 517 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 576
I+ + LLA+ + D+TIR+W S H + V+F +G
Sbjct: 59 HKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDF---SADG- 114
Query: 577 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 636
+LAS S D I W ++ + +++ + + C+ FSP G + +
Sbjct: 115 QFLASASEDKSIKVWN----------MYRQRFLYS--LYRHTHWVRCAKFSPDGRLIVSC 162
Query: 637 SGDHHVRVY 645
S D ++++
Sbjct: 163 SEDKTIKIW 171
Score = 90 (36.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 59/210 (28%), Positives = 81/210 (38%)
Query: 733 DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW 792
D +I + + + IKIWD N V + +P + + SAG D + IW
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNP-NGTCIASAGSDHTVKIW 213
Query: 793 DILSSKQRGYKWFH----NIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKR 848
DI +K + H N V G S DGT L G L +Y L G
Sbjct: 214 DIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITA-SSDGTLKILDLLEGRL-IYTLQGHTG 271
Query: 849 PQ---NIPR--ELFFH--TDYRTLNRPNGLFEPTYDEVT--NLPP-HLMPPPFLVDLNG- 897
P + + ELF D + L E Y +V+ NL H PP L+D+
Sbjct: 272 PVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLHFDSPPHLLDIYPR 331
Query: 898 TPYPPEVQRLVPGRENADDTELLPDITTND 927
TP+P E GR D E+ P + D
Sbjct: 332 TPHPHE------GR--IDTVEINPKLDVTD 353
Score = 42 (19.8 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 259 DDEVLSRKRRGKSTYENDFDFNPAGETKTKA--EKFLM 294
+D VL R +G DF+P G+ + FLM
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLM 43
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 177 (67.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 473 LGHLSAVFCVLFDKL-GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI 531
+ H S V ++ K G ++ TG DD + LW + +L G + + + ++
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
L+ AG+ +IR+W+L+ + L+GH+ I ++F P G ++AS S D I W
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY---G-EFVASGSQDTNIKLW 132
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
DI VF R R + + C FSP G +LA+ + DH V+++ +
Sbjct: 133 ----DIRRKGCVF--------RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 164 (62.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV C+ F G+ + + ADD +KLW GK+++ G +G ++ + LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCP 570
A+G+ D+TIR W+L+ +S + G G + V F P
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 138 (53.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V + E+IV G+ I++W K+L TL G I + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G+ D I++W+++ + GH + + F P +G +LAS + D + W
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP---DG-KWLASAADDHTVKLW-- 174
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
D+ K + P G +++ F P LA+GS D +R + ++
Sbjct: 175 --DLTAGKMMSEFPG------HTGPVNVV--EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 38 (18.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 5/25 (20%), Positives = 16/25 (64%)
Query: 1149 EEVPDIYKPSDWLAEVVPKKAPYYP 1173
E+ +I++P + ++ P+++ +P
Sbjct: 380 EDYNEIFQPKNSISRTPPRRSEPFP 404
Score = 38 (18.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 1587 YESPIDFVKDVKRVFHNSRNYNQNKRSK 1614
YE P +RV HNS + ++ S+
Sbjct: 337 YERPSTTCSKPQRVKHNSESERRSPSSE 364
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 165 (63.1 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 50/156 (32%), Positives = 75/156 (48%)
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549
V+ +G+DD ++LW G L TL G SG + +A LLA+G+ DKT+R+W+ T
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 550 LAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVM 609
+ L GH + V F P +G LAS S D + W + +T
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSP---DG-RLLASGSFDKTVRLWDPATG-SLQQT------- 816
Query: 610 FNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
+R + + +FSP G LA+GS D VR++
Sbjct: 817 ----LRGHSDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Score = 164 (62.8 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 41/118 (34%), Positives = 58/118 (49%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V V F G ++ +G+ D ++LW G L TLRG S + +A LL
Sbjct: 735 GHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLL 794
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFW 591
A+G+ DKT+R+W+ T + L GH + V F P +G LAS S D + W
Sbjct: 795 ASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSP---DG-RLLASGSFDKTVRLW 848
Score = 137 (53.3 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 449 SGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG 508
SG +++ + +L+Q GH + V V F G ++ +G+ D ++LW G
Sbjct: 754 SGSFDKTVRLWDPATGSLQQTL--RGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATG 811
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L TLRG S + +A LLA+G+ DKT+R+W+ T L+ +G +T + F
Sbjct: 812 SLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLI-IKGTVTELQF 870
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 138 (53.6 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
+GH V+ F + +++G++D ++LW L + +G + + D++
Sbjct: 522 VGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHY 581
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
A + D+T R+W+ + P+ + GH + V+F P NG Y+ + S+D W
Sbjct: 582 FATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHP---NGC-YVFTGSSDKTCRMW- 636
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
D+ +V +F P + +C P G +L+TGS D + V+
Sbjct: 637 ---DVSTGDSVR----LFLGHTAPVISIAVC----PDGRWLSTGSEDGIINVW 678
Score = 122 (48.0 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 41/140 (29%), Positives = 63/140 (45%)
Query: 513 TLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
TL G SG + + N L +G+ DKT+R+W++ T + GH + V+F PL
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL- 578
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF 632
G +Y A+ S D W D +F + N+ + C SF P G +
Sbjct: 579 --G-HYFATASHDQTARLWS--CDHIYPLRIFAGHL--ND--------VDCVSFHPNGCY 623
Query: 633 LATGSGDHHVRVYKMDGVDS 652
+ TGS D R++ + DS
Sbjct: 624 VFTGSSDKTCRMWDVSTGDS 643
Score = 105 (42.0 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 747 KIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFH 806
++WD GD V++ GHT V + P D R L + DG+I +WDI + K+
Sbjct: 634 RMWDVSTGDSVRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDIGTGKRLKQ---- 688
Query: 807 NIVEGQGEGALFDGKWSPDG 826
+ G G+ A++ +S +G
Sbjct: 689 --MRGHGKNAIYSLSYSKEG 706
Score = 85 (35.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 49/175 (28%), Positives = 74/175 (42%)
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQ--TLAPISVLVGHQGIITGVNFCPLEV--NGFNY 578
D + D R + AAG D I+IW+L +L ++ + + C V +G Y
Sbjct: 473 DFSDDCR--IAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPT-CKTLVGHSGTVY 529
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERI--RPGNAHILCS-SFSPGGLFLAT 635
S S D KY L KTV + + + G+ H + SFSP G + AT
Sbjct: 530 STSFSPDN-----KYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFAT 584
Query: 636 GSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
S D R++ D + PL I H + VD + + + +GS D T +W
Sbjct: 585 ASHDQTARLWSCDHI-YPLRIFA--GHLNDVDCVSFHPNGCYVFTGSSDKTCRMW 636
Score = 39 (18.8 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 481 CVLFDKLGEVIVTGADDLLIKLWRARDGKLL 511
C+ F + G D IK+W + DG L
Sbjct: 471 CLDFSDDCRIAAAGFQDSYIKIW-SLDGSSL 500
>TAIR|locus:2086498 [details] [associations]
symbol:GTE8 "AT3G27260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
PROSITE:PS51525 EMBL:AP000381 HSSP:Q03330 HOGENOM:HOG000242557
EMBL:AY062532 EMBL:AY093312 EMBL:BX824603 IPI:IPI00533928
IPI:IPI01007564 RefSeq:NP_189362.1 UniGene:At.27309
ProteinModelPortal:Q9LK27 SMR:Q9LK27 STRING:Q9LK27 PaxDb:Q9LK27
PRIDE:Q9LK27 EnsemblPlants:AT3G27260.1 GeneID:822345
KEGG:ath:AT3G27260 TAIR:At3g27260 InParanoid:Q9LK27 OMA:GLYMKQD
PhylomeDB:Q9LK27 Genevestigator:Q9LK27 Uniprot:Q9LK27
Length = 813
Score = 160 (61.4 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 41/110 (37%), Positives = 56/110 (50%)
Query: 121 ECREVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDF 178
+C +L LW P S F+ PVD KL+ PDY + PMDLGT+++ L Y SP +F
Sbjct: 179 QCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEF 238
Query: 179 VKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNK 228
DV+ F N+ YN ++IM LS+ E RW + K K
Sbjct: 239 AADVRLTFTNAMTYNPPGHD-VHIMGDILSKLFE-------ARWKTIKKK 280
Score = 160 (61.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 41/110 (37%), Positives = 56/110 (50%)
Query: 1536 ECREVLETLWVCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDF 1593
+C +L LW P S F+ PVD KL+ PDY + PMDLGT+++ L Y SP +F
Sbjct: 179 QCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEF 238
Query: 1594 VKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNK 1643
DV+ F N+ YN ++IM LS+ E RW + K K
Sbjct: 239 AADVRLTFTNAMTYNPPGHD-VHIMGDILSKLFE-------ARWKTIKKK 280
Score = 57 (25.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 18/84 (21%), Positives = 41/84 (48%)
Query: 260 DEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLMSAMETERLTRLDQELMLLIIKYLEK 319
+E++ +K++ K+ + + + + +AE +A E +R L++E + +EK
Sbjct: 573 EELVLQKKKEKARLQAEAEAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQALLKMEK 632
Query: 320 G-PCHEAAKVLTDLVEAKNLLPER 342
+E ++ L DL + PE+
Sbjct: 633 TVEINENSRFLEDLEMLSSSAPEQ 656
Score = 47 (21.6 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 1297 WGTIEGKPSPTKSPFLGYKILWDNNERENLSPWDLEPPKEGKEATEPGGSLPVEP 1351
W TI+ K P L L N+ER+ + + P K+ K A+ S+P EP
Sbjct: 274 WKTIKKKLPPCSMQTLPAVTLEPNDERK--AAISVPPAKKRKMASPVRESVP-EP 325
Score = 38 (18.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 1121 VNLEPPKRVRRHTKVKPIQVSLPKQLIPEEVPDIYKP 1157
V LEP + V P + + E VP+ KP
Sbjct: 292 VTLEPNDERKAAISVPPAKKRKMASPVRESVPEPVKP 328
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 161 (61.7 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 90/378 (23%), Positives = 149/378 (39%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD----GKLLATLRGCSGEISDIAIDNR 529
GH S VF ++ + +++ +G+ D ++W + G LR C E N+
Sbjct: 176 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNK 235
Query: 530 NI----------LLAAGTVDKTIRIWNLQ-TLAPISVLVGHQGIITGVNFCPLEVNGFNY 578
++ LLA G+ D RIW LA S L H+G I + + G NY
Sbjct: 236 DVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA--STLGQHKGPIFALKW---NKKG-NY 289
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638
+ S D W + FH +A L + F A+ S
Sbjct: 290 ILSAGVDKTTIIWDAHTGEAKQQFPFH------------SAPALDVDWQNNTTF-ASCST 336
Query: 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWR 698
D + V ++ G D P + + H+++V++I+W S + S S D T IW K Q
Sbjct: 337 DMCIHVCRL-GCDRP--VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK--QDT 391
Query: 699 FIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQ 758
+ D+ H+KE T K + + ++ + +F+ +++WD G +
Sbjct: 392 CVH-DLQA---HSKEIY--TIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIH 445
Query: 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ-RGYKWFHNIVE----GQG 813
L H V+ + P D + L S D + IW+ S Y+ I E +G
Sbjct: 446 TLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNTQSGTLVHSYRGTGGIFEVCWNARG 504
Query: 814 EGALFDGKWSPDGTTCAL 831
+ G + DG+ C L
Sbjct: 505 DKV---GASASDGSVCVL 519
Score = 96 (38.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT--VFHEPVMFN 611
+VL GH+ + + P+ + LAS S D W + + T V +
Sbjct: 172 TVLRGHESEVFICAWNPVS----DLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREG 227
Query: 612 ERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-VDSPLGILEVEEHSDKVDSIQ 670
P N + ++ G LATGS D R++ DG + S LG +H + +++
Sbjct: 228 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLG-----QHKGPIFALK 282
Query: 671 WSHSHLRFVSGSRDGTALIW 690
W+ +S D T +IW
Sbjct: 283 WNKKGNYILSAGVDKTTIIW 302
Score = 87 (35.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
++ + +F+ +++WD G + L H V+ + P D + L S D + IW+
Sbjct: 423 MLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWNT- 480
Query: 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGL 843
Q G H+ +G G +F+ W+ G + S G + V L
Sbjct: 481 ---QSG-TLVHSY---RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 521
>UNIPROTKB|K7GSJ7 [details] [associations]
symbol:LOC100738923 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] InterPro:IPR000197
InterPro:IPR001487 InterPro:IPR003101 Pfam:PF00439 Pfam:PF02135
Pfam:PF02172 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50134
PROSITE:PS50952 SMART:SM00297 SMART:SM00551 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00700000104285 Gene3D:1.20.1020.10 SUPFAM:SSF57933
Gene3D:1.10.246.20 InterPro:IPR010303 Pfam:PF06001 SUPFAM:SSF47040
EMBL:FP067388 EMBL:AEMK01191082 EMBL:FP565710
Ensembl:ENSSSCT00000034723 Uniprot:K7GSJ7
Length = 1235
Score = 175 (66.7 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 43/121 (35%), Positives = 69/121 (57%)
Query: 98 AVTRAQREAMNQKKLKRPFNWKNECREVLETLW-VCPDSEPFRKPVDK--LDHPDYDKIV 154
A +++ + +KK+ +P + LE L+ P+S PFR+PVD L PDY IV
Sbjct: 1073 AASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIV 1132
Query: 155 IAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEH 214
PMDL TI+ +L Y+ P +V DV +F+N+ YN+ K S++Y ++L+E E+
Sbjct: 1133 KNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNR-KTSRVYKFCSKLAEVFEQE 1191
Query: 215 L 215
+
Sbjct: 1192 I 1192
Score = 175 (66.7 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 43/121 (35%), Positives = 69/121 (57%)
Query: 1513 AVTRAQREAMNQKKLKRPFNWKNECREVLETLW-VCPDSEPFRKPVDK--LDHPDYDKIV 1569
A +++ + +KK+ +P + LE L+ P+S PFR+PVD L PDY IV
Sbjct: 1073 AASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIV 1132
Query: 1570 IAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEH 1629
PMDL TI+ +L Y+ P +V DV +F+N+ YN+ K S++Y ++L+E E+
Sbjct: 1133 KNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNR-KTSRVYKFCSKLAEVFEQE 1191
Query: 1630 L 1630
+
Sbjct: 1192 I 1192
Score = 46 (21.3 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1224 GIKYEIAPPRMCC 1236
G KYE +P +CC
Sbjct: 1204 GRKYEFSPQTLCC 1216
Score = 38 (18.4 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 352 QTLAEVASSHPNVTASFLPKICQRLGP 378
Q A+ A S V + LP LGP
Sbjct: 815 QPAAQAAVSQGQVPGAALPNPLNMLGP 841
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 879 VTNLPPHLMPPP 890
VT P H PPP
Sbjct: 851 VTQSPLHQTPPP 862
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 975 GESSAATEGTSPS 987
G + AA++ TSPS
Sbjct: 1069 GANGAASQSTSPS 1081
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 156 (60.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 54/202 (26%), Positives = 86/202 (42%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 534
H V C F G ++T +DD + +W + G+LL L G G + L+A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 535 AGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYK 594
+ + D +IR+W++ + VL GHQ + V+F P LAS D W
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSP----DSKQLASGGWDKRAIVW--- 137
Query: 595 LDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPL 654
++ + V H V + I+ S FSP LATGS D V ++ + +
Sbjct: 138 -EVQSGRRV-HLLVGHCDSIQS-------SDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188
Query: 655 GILEVEEHSDKVDSIQWSHSHL 676
+E H+ + + +S S L
Sbjct: 189 SYHNLEGHTGNISCLCYSASGL 210
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/181 (28%), Positives = 79/181 (43%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V F G +I + + D I+LW K L L+G + ++ + L
Sbjct: 66 GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQL 125
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+G DK +W +Q+ + +LVGH I +F P + LA+ S D + W
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTS----DSLATGSWDSTVHIW-- 179
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 653
D+ S PV+ + +I C +S GL LA+GS D + V+K + P
Sbjct: 180 --DLRAST-----PVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTICVWKPTTNNLP 231
Query: 654 L 654
L
Sbjct: 232 L 232
>ZFIN|ZDB-GENE-050302-102 [details] [associations]
symbol:crebbpb "CREB binding protein b"
species:7955 "Danio rerio" [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000123 "histone
acetyltransferase complex" evidence=IEA] InterPro:IPR000197
InterPro:IPR000433 InterPro:IPR001487 InterPro:IPR003101
InterPro:IPR009110 InterPro:IPR014744 Pfam:PF00439 Pfam:PF00569
Pfam:PF02135 Pfam:PF02172 Pfam:PF09030 PRINTS:PR00503
PROSITE:PS01357 PROSITE:PS50014 PROSITE:PS50134 PROSITE:PS50135
PROSITE:PS50952 SMART:SM00291 SMART:SM00297 SMART:SM00551
ZFIN:ZDB-GENE-050302-102 GO:GO:0006355 GO:GO:0008270 GO:GO:0003713
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104285 GO:GO:0004402
Gene3D:1.20.1020.10 SUPFAM:SSF57933 Gene3D:1.10.246.20
InterPro:IPR010303 InterPro:IPR013178 Pfam:PF06001 Pfam:PF08214
SUPFAM:SSF47040 GO:GO:0000123 SUPFAM:SSF69125 EMBL:CR846080
EMBL:CR339059 EMBL:CT971494 IPI:IPI00896996
Ensembl:ENSDART00000091873 Bgee:F1QHF7 Uniprot:F1QHF7
Length = 2424
Score = 180 (68.4 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 45/130 (34%), Positives = 74/130 (56%)
Query: 90 RQRRVRPT-AVTRAQREAMNQKKLKRPFNWKNECREVLETLW-VCPDSEPFRKPVDK--L 145
++ V T + T A + A ++KK+ +P + LE L+ P+S PFR+PVD L
Sbjct: 995 KEEEVSSTNSSTPANQSAQSRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPNLL 1054
Query: 146 DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTT 205
PDY IV P+DL TI+ +L Y+ P +V D+ +F+N+ YN+ K S++Y +
Sbjct: 1055 GIPDYFDIVKNPIDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNR-KTSRVYKYCS 1113
Query: 206 RLSEFAEEHL 215
+L+E E+ +
Sbjct: 1114 KLAEVFEQEI 1123
Score = 180 (68.4 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 45/130 (34%), Positives = 74/130 (56%)
Query: 1505 RQRRVRPT-AVTRAQREAMNQKKLKRPFNWKNECREVLETLW-VCPDSEPFRKPVDK--L 1560
++ V T + T A + A ++KK+ +P + LE L+ P+S PFR+PVD L
Sbjct: 995 KEEEVSSTNSSTPANQSAQSRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPNLL 1054
Query: 1561 DHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTT 1620
PDY IV P+DL TI+ +L Y+ P +V D+ +F+N+ YN+ K S++Y +
Sbjct: 1055 GIPDYFDIVKNPIDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNR-KTSRVYKYCS 1113
Query: 1621 RLSEFAEEHL 1630
+L+E E+ +
Sbjct: 1114 KLAEVFEQEI 1123
Score = 53 (23.7 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 1124 EPPKRVRRHTKVKPIQVSLP-KQLIPEEVPDIYKPSDWLAEVVPKKA-PYYP 1173
EPP ++++ T V+ Q S P Q+ P + P+ +AE ++A P YP
Sbjct: 881 EPPMQMQQPTSVQAQQPSTPLSQMAPSVDNRVPTPAS-VAETHSQQALPDYP 931
Score = 50 (22.7 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 1535 NECREVLETLWVCPDSEPF 1553
NEC+ +ET W C E F
Sbjct: 1642 NECKHHVETRWHCTVCEDF 1660
Score = 50 (22.7 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1224 GIKYEIAPPRMCCL--KLAVMKPNGKLTNEFFNIKYH 1258
G KYE +P +CC +L + +G T + +YH
Sbjct: 1135 GRKYEFSPQTLCCYGKQLCTISRDG--TYYSYQNRYH 1169
Score = 43 (20.2 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 1590 PIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWN 1638
P F+ D + + ++ +NK S + TRL + E+ + + R N
Sbjct: 1237 PSGFICD-NCLKKSGKSRKENKFSAKKLQCTRLGSYIEDRVNKYLKRQN 1284
Score = 37 (18.1 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 1670 LVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAESGNEQVEEV 1714
+V S D+ + K KS + + + + + +TKA E+++ V
Sbjct: 1295 VVASSDKTVEVKPGMKSRFVDSGEMSESFPYRTKALFAFEEIDGV 1339
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 1544 LWVCPDSE 1551
+W CP SE
Sbjct: 1405 IWACPPSE 1412
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 1301 EGKPSPTKSP 1310
+GKP P SP
Sbjct: 1872 QGKPGPQSSP 1881
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 154 (59.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V V + ++I + + D ++LWRA DG+ +AT RG + +A + L+
Sbjct: 373 GHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLI 432
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G+ D T+++W++QT L GH + GV++ P +G + +AS D I W Y
Sbjct: 433 VSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAP---DG-SRVASGGKDKVIKLWAY 488
Score = 111 (44.1 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 45/165 (27%), Positives = 78/165 (47%)
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
LA+G+ D T+R+W+L T P GH+ + V++ P +G LAS G I W
Sbjct: 134 LASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAP---DG-KRLASGCKAGSIIIW- 188
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLF-----LATGSGDHHVRVYKM 647
D + + P+ +++ HI C ++ P LA+ SGD R++
Sbjct: 189 ---DPETGQQK-GRPLSGHKK------HINCLAWEPYHRDPECRKLASASGDGDCRIW-- 236
Query: 648 DGVDSPLG--ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
D LG ++ + H++ V +++W + L + S S+D T +W
Sbjct: 237 ---DVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTS-SKDRTVKMW 277
Score = 101 (40.6 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 22/95 (23%), Positives = 47/95 (49%)
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+I + +F+ +++W A +G + +GH V+ + + DSR+++S D + +W +
Sbjct: 389 LIASASFDKSVRLWRASDGQYMATFRGHVQAVYTV-AWSADSRLIVSGSKDSTLKVWSVQ 447
Query: 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCA 830
+ K + G + +F W+PDG+ A
Sbjct: 448 TKK------LAQELPGHAD-EVFGVDWAPDGSRVA 475
Score = 75 (31.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 38/154 (24%), Positives = 61/154 (39%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH AV + F G + +G+ D ++LW T G + ++ L
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL 176
Query: 534 AAGTVDKTIRIWNLQTLAPIS-VLVGHQGIITGVNFCPLEVNG-FNYLASTSTDGCIGFW 591
A+G +I IW+ +T L GH+ I + + P + LAS S DG W
Sbjct: 177 ASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIW 236
Query: 592 KYKLDIDISKTVFHEPVMFNERIRPGNAHILCSS 625
KL + H + +R G A ++ +S
Sbjct: 237 DVKLGQCLMNIAGHTNAV--TAVRWGGAGLIYTS 268
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 138 (53.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 530 NILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIG 589
N+L+ G+ DKT+R+WN + + I V GH G I V F F++ S S D +
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAK---KSFSFFVSGSGDRTLK 472
Query: 590 FWKYKLDIDISKTVFHEPVMFNER--IRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKM 647
W LD IS+ EP+ R + + I + + + TGS D ++++
Sbjct: 473 VWS--LD-GISEDS-EEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL 528
Query: 648 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
+ + ++ ++ H ++ S+++S ++ S D T IW
Sbjct: 529 PDL---VHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 55/207 (26%), Positives = 90/207 (43%)
Query: 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 547
G I D+ I + + D + +T+ G S ++ +A+ + LL + + IR+W+L
Sbjct: 31 GSFIACACGDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
Query: 548 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVF--H 605
+TL I GH+G + G+ C +G LA+ D + W +D F H
Sbjct: 90 ETLKCIRSWKGHEGPVMGMA-C--HASG-GLLATAGADRKVLVWD--VDGGFCTHYFRGH 143
Query: 606 EPVMFNERIRP-GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV-EEHS 663
+ V+ + P N +IL S GS D VRV+ ++ ++ L + E+H
Sbjct: 144 KGVVSSILFHPDSNKNILIS-----------GSDDATVRVWDLNAKNTEKKCLAIMEKHF 192
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIW 690
V SI S L S RD +W
Sbjct: 193 SAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 128 (50.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 46/186 (24%), Positives = 85/186 (45%)
Query: 514 LRGCSGEISDIA-IDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLE 572
L G + EI+D+ + + LA T + +R++++ T++ VL GH+ ++ ++ C +
Sbjct: 354 LVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTC-VS 412
Query: 573 VNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL- 631
+G + + S D + W I H N IL +F+
Sbjct: 413 SSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGH------------NGDILAVAFAKKSFS 460
Query: 632 FLATGSGDHHVRVYKMDGV--DS--PLGILE---VEEHSDKVDSIQWSHSHLRFVSGSRD 684
F +GSGD ++V+ +DG+ DS P+ + V H ++S+ + + +GS D
Sbjct: 461 FFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSED 520
Query: 685 GTALIW 690
TA IW
Sbjct: 521 RTASIW 526
Score = 121 (47.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 47/187 (25%), Positives = 86/187 (45%)
Query: 618 NAHILCSSFSPGGL-FLATGSGDHHVRVYKMDGVDSPLGILEVEEHSD-KVDSIQWSHSH 675
N IL +F+ F +GSGD ++V+ +DG+ + EE + K S+ +H
Sbjct: 446 NGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISE-----DSEEPINLKTRSVVAAHDK 500
Query: 676 -LRFVSGSRDGTALIWYYK---CSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA 731
+ V+ +R+ + + + S WR LP K ++ V +
Sbjct: 501 DINSVAVARNDSLVCTGSEDRTASIWR---------LPDLVHVVTLKGHKRRIFSVEFST 551
Query: 732 SDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIII 791
D+ V+TA + +KIW +G ++ +GHT+ V + S D +S G DGL+ +
Sbjct: 552 VDQCVMTASG-DKTVKIWAISDGSCLKTFEGHTSSV-LRASFITDGTQFVSCGADGLLKL 609
Query: 792 WDILSSK 798
W++ +S+
Sbjct: 610 WNVNTSE 616
Score = 97 (39.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 469 HYVNLGHLSAVFCVLF--DKLGEVIVTGADDLLIKLW--RAR--DGKLLATLRGCSGEIS 522
HY GH V +LF D ++++G+DD +++W A+ + K LA + ++
Sbjct: 138 HYFR-GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT 196
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQ------TLAPISVLVGHQGIITGVNF 568
IA+ + L + DK + +W+L T+A VL + +G F
Sbjct: 197 SIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPF 248
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 18/82 (21%), Positives = 39/82 (47%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIW--DILSSKQRGY- 802
+K+W+ + + H ++V+ L + ++ + G D +I +W S K+ +
Sbjct: 607 LKLWNVNTSECIATYDQHEDKVWALAVGK-KTEMIATGGGDAVINLWHDSTASDKEDDFR 665
Query: 803 KWFHNIVEGQG-EGALFDGKWS 823
K I+ GQ E A+ D +++
Sbjct: 666 KEEEAILRGQELENAVLDAEYT 687
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 145 (56.1 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V+ F G V+G D + +LW + L G +++ + +
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A G+ D+T+R+W++ + + GH+G I + F P NG +LA+ +TDG + W
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP---NG-RFLATGATDGRVLLW-- 696
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
DI H +M E ++ + FS G LA+GS D+ VR++
Sbjct: 697 ----DIG----HG-LMVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 128 (50.1 bits), Expect = 0.00057, P = 0.00057
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 456 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 515
L + H Y LR + GHL+ V C F + TG+ D ++LW +G +
Sbjct: 611 LWATDH-YQPLR---IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 666
Query: 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575
G G I + LA G D + +W++ + L GH + + F +G
Sbjct: 667 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR---DG 723
Query: 576 FNYLASTSTDGCIGFW 591
LAS S D + W
Sbjct: 724 -EILASGSMDNTVRLW 738
Score = 119 (46.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 495 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 553
+DD+L ++ + L L G SG + + +RN LL++ D T+R+W+LQT +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE-DGTVRLWSLQTFTCL 578
Query: 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 612
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 579 VGYKGHNYPVWDTQFSPY---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 625
Query: 613 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
+ A + C+ F P ++ATGS D VR++
Sbjct: 626 HL----ADVNCTRFHPNSNYVATGSADRTVRLW 654
Score = 98 (39.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
+++WD NG+ V++ GH + L P + R L + DG +++WDI
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDI 698
Score = 83 (34.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
T K + + + + R++ T + ++ +WD +G +V LKGHT+ V L D
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DG 723
Query: 778 RVLLSAGHDGLIIIWDILSS 797
+L S D + +WD + +
Sbjct: 724 EILASGSMDNTVRLWDAVKA 743
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 145 (56.1 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH V+ F G V+G D + +LW + L G +++ + +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 643
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A G+ D+T+R+W++ + + GH+G I + F P NG +LA+ +TDG + W
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP---NG-RFLATGATDGRVLLW-- 697
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
DI H +M E ++ + FS G LA+GS D+ VR++
Sbjct: 698 ----DIG----HG-LMVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 128 (50.1 bits), Expect = 0.00057, P = 0.00057
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 456 LMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR 515
L + H Y LR + GHL+ V C F + TG+ D ++LW +G +
Sbjct: 612 LWATDH-YQPLR---IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 667
Query: 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575
G G I + LA G D + +W++ + L GH + + F +G
Sbjct: 668 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR---DG 724
Query: 576 FNYLASTSTDGCIGFW 591
LAS S D + W
Sbjct: 725 -EILASGSMDNTVRLW 739
Score = 119 (46.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 495 ADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQTLAPI 553
+DD+L ++ + L L G SG + + +RN LL++ D T+R+W+LQT +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE-DGTVRLWSLQTFTCL 579
Query: 554 SVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV-MFNE 612
GH + F P G+ Y S D W T ++P+ +F
Sbjct: 580 VGYKGHNYPVWDTQFSPY---GY-YFVSGGHDRVARLWA---------TDHYQPLRIFAG 626
Query: 613 RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
+ A + C+ F P ++ATGS D VR++
Sbjct: 627 HL----ADVNCTRFHPNSNYVATGSADRTVRLW 655
Score = 98 (39.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
+++WD NG+ V++ GH + L P + R L + DG +++WDI
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDI 699
Score = 83 (34.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
T K + + + + R++ T + ++ +WD +G +V LKGHT+ V L D
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DG 724
Query: 778 RVLLSAGHDGLIIIWDILSS 797
+L S D + +WD + +
Sbjct: 725 EILASGSMDNTVRLWDAVKA 744
WARNING: HSPs involving 543 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1915 1673 0.00087 125 3 11 22 0.42 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 793
No. of states in DFA: 635 (67 KB)
Total size of DFA: 746 KB (2316 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 146.07u 0.13s 146.20t Elapsed: 00:00:35
Total cpu time: 146.23u 0.13s 146.36t Elapsed: 00:00:35
Start: Thu Aug 15 14:22:30 2013 End: Thu Aug 15 14:23:05 2013
WARNINGS ISSUED: 2