RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9598
(1915 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 132 bits (333), Expect = 3e-34
Identities = 67/324 (20%), Positives = 128/324 (39%), Gaps = 25/324 (7%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH S V V+F + V+V+ ++D IK+W G TL+G + + DI+ D+ LL
Sbjct: 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 74
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
A+ + D TI++W+ Q I + GH ++ V+ P +++ S S D I W+
Sbjct: 75 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP----NGDHIVSASRDKTIKMWEV 130
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSP 653
+ + H + + G +A+ S D VRV+ + +
Sbjct: 131 QTGYCVKTFTGHREWVR------------MVRPNQDGTLIASCSNDQTVRVWVVATKEC- 177
Query: 654 LGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKE 713
E+ EH V+ I W+ G+ K + T
Sbjct: 178 --KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235
Query: 714 TSDETNK----KIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFV 769
T V V + + +++++ + +++WD N ++ L H + V
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSC-ADDKTLRVWDYKNKRCMKTLNAHEHFVTS 294
Query: 770 LESHPFDSRVLLSAGHDGLIIIWD 793
L+ H + +++ D + +W+
Sbjct: 295 LDFHK-TAPYVVTGSVDQTVKVWE 317
Score = 128 bits (321), Expect = 1e-32
Identities = 50/344 (14%), Positives = 108/344 (31%), Gaps = 31/344 (9%)
Query: 501 KLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQ 560
K W R L G ++ + ++ + + D TI++W+ +T L GH
Sbjct: 1 KEWIPR-PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 561 GIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 620
+ ++F K + + + +
Sbjct: 60 DSVQDISFDH----------------SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN 103
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+ S P G + + S D +++++ V + + H + V ++ + S
Sbjct: 104 VSSVSIMPNGDHIVSASRDKTIKMWE---VQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 160
Query: 681 GSRDGTALIWYYKCSQWRFIRL---DMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVI 737
S D T +W + + + C+ E+S + + + +
Sbjct: 161 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 220
Query: 738 TAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSS 797
+ + + IK+WD G + L GH N V + H + +LS D + +WD +
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNK 279
Query: 798 KQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 841
+ H E + + + V+
Sbjct: 280 RCMKTLNAH-------EHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 92.1 bits (227), Expect = 2e-20
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 8/161 (4%)
Query: 432 NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVI 491
+V+V E IS S Y ++ + K G +
Sbjct: 165 QTVRVWVVATKECKAELREHRHVVECISWAPES----SYSSISEATGSETKKSGKPGPFL 220
Query: 492 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLA 551
++G+ D IK+W G L TL G + + + + + DKT+R+W+ +
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 280
Query: 552 PISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ L H+ +T ++F Y+ + S D + W+
Sbjct: 281 CMKTLNAHEHFVTSLDFHK---TA-PYVVTGSVDQTVKVWE 317
Score = 91.0 bits (224), Expect = 5e-20
Identities = 50/250 (20%), Positives = 90/250 (36%), Gaps = 31/250 (12%)
Query: 457 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRG 516
I + GH V V G+ IV+ + D IK+W + G + T G
Sbjct: 82 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 141
Query: 517 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 576
+ + + L+A+ + D+T+R+W + T + L H+ ++ +++ P
Sbjct: 142 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSS 201
Query: 577 ----------------NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH 620
+L S S D I W + + V H+
Sbjct: 202 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD------------NW 249
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
+ F GG F+ + + D +RV+ + L H V S+ + + V+
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKN-KRCMKTL--NAHEHFVTSLDFHKTAPYVVT 306
Query: 681 GSRDGTALIW 690
GS D T +W
Sbjct: 307 GSVDQTVKVW 316
Score = 73.6 bits (179), Expect = 3e-14
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 415 SSYDYIARQHGTSLLVPNSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLG 474
+ I+ +S + T + + SR I S +G
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 245
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 534
H + V VLF G+ I++ ADD +++W ++ + + TL ++ + +
Sbjct: 246 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 305
Query: 535 AGTVDKTIRIW 545
G+VD+T+++W
Sbjct: 306 TGSVDQTVKVW 316
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 127 bits (320), Expect = 3e-32
Identities = 55/329 (16%), Positives = 105/329 (31%), Gaps = 32/329 (9%)
Query: 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524
+R GHL+ ++ + + ++V+ + D + +W + + + S +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 584
A +A G +D I+NL+T G E+ G S
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKT-------------REGNVRVSRELAGHTGYLSCCR 150
Query: 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644
E ++ S +P +G+ D ++
Sbjct: 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 704
+ V + H +++I + + F +GS D T ++ + Q
Sbjct: 211 WD---VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD 267
Query: 705 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 764
N +T V++ S R ++ +F +WDA D VL GH
Sbjct: 268 NIICG--------------ITSVSFSKSGRLLLAG-YDDFNCNVWDALKADRAGVLAGHD 312
Query: 765 NEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
N V L D + + D + IW+
Sbjct: 313 NRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
Score = 83.2 bits (204), Expect = 3e-17
Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 14/185 (7%)
Query: 461 HKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE 520
+Q GH V + + V+GA D KLW R+G T G +
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 521 ISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLA 580
I+ I A G+ D T R+++ + H II G+ +G L
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFD-LRADQELMTYSHDNIICGITSVSFSKSG-RLLL 286
Query: 581 STSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH 640
+ D W H+ + C + G+ +ATGS D
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHD------------NRVSCLGVTDDGMAVATGSWDS 334
Query: 641 HVRVY 645
++++
Sbjct: 335 FLKIW 339
Score = 73.6 bits (179), Expect = 4e-14
Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 432 NSVKVHNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVI 491
N++ N +G + + + Y + + + V F K G ++
Sbjct: 230 NAICFFPNGNAF----ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 492 VTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546
+ G DD +W A L G +S + + + + +A G+ D ++IWN
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 71.3 bits (173), Expect = 3e-13
Identities = 49/347 (14%), Positives = 103/347 (29%), Gaps = 49/347 (14%)
Query: 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 584
A + + +D RI + L GH I +++ + L S S
Sbjct: 24 ACADATLSQITNNIDPVGRI----QMRTRRTLRGHLAKIYAMHWGT---DS-RLLVSASQ 75
Query: 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644
DG + W + I ++ ++ +++P G ++A G D+ +
Sbjct: 76 DGKLIIWDSYTTNKVH------------AIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123
Query: 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 704
Y + + + + S + V+ S D T +W + Q
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 705 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 764
V ++ R ++ + K+WD G Q GH
Sbjct: 184 TGD----------------VMSLSLAPDTRLFVSG-ACDASAKLWDVREGMCRQTFTGHE 226
Query: 765 NEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSP 824
+++ + P + + D ++D+ + ++ NI+ G + +S
Sbjct: 227 SDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG-----ITSVSFSK 280
Query: 825 DGTTCALTDSYGHLLVYGLGGFKRPQNIP------RELFFHTDYRTL 865
G + V+ R + L D +
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAV 327
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 125 bits (313), Expect = 5e-31
Identities = 59/334 (17%), Positives = 116/334 (34%), Gaps = 19/334 (5%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
L H S V CV F GE + TG + +++R DG L+A L S D N +
Sbjct: 59 LDHTSVVCCVKFSNDGEYLATGCNKT-TQVYRVSDGSLVARLSDDSAANKDPENLNTSSS 117
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
++ +++ ++ + I + + + + +
Sbjct: 118 PSSDLYIRSVC-FSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD 176
Query: 593 YKLDIDISKTVFHEPVMFNERIRPG---NAHILCSSFSPGGLFLATGSGDHHVRVYKMDG 649
+ +TV + + + + G ++A GS D VRV+ +
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 236
Query: 650 VDSPLGILEVEE----HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMN 705
+ E H D V S+ ++ VSGS D + +W + + + N
Sbjct: 237 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 296
Query: 706 TCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTN 765
+ + V VA +D ++++ + + + WD +G+ + +L+GH N
Sbjct: 297 SGTCEVTYIGHKDF----VLSVATTQNDEYILSG-SKDRGVLFWDKKSGNPLLMLQGHRN 351
Query: 766 EVFVLESHPF-----DSRVLLSAGHDGLIIIWDI 794
V + + V + D IW
Sbjct: 352 SVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 85.2 bits (209), Expect = 1e-17
Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 20/213 (9%)
Query: 494 GADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL--- 550
G+ D +++W R G+ TL G + +AAG++D+ +R+W+ +T
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 551 ----APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHE 606
+ GH+ + V F +G + S S D + W + + S +
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTR---DG-QSVVSGSLDRSVKLWNLQNANNKSDSKTPN 296
Query: 607 PVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKV 666
+L + + ++ +GS D V + S +L ++ H + V
Sbjct: 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD---KKSGNPLLMLQGHRNSV 353
Query: 667 DSIQWSHSHL------RFVSGSRDGTALIWYYK 693
S+ ++ F +GS D A IW YK
Sbjct: 354 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 83.7 bits (205), Expect = 3e-17
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 468 QHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLA------------TLR 515
++ GH +V+ V+F + G+ +V+G+ D +KLW ++ + T
Sbjct: 246 ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 305
Query: 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575
G + +A + + +G+ D+ + W+ ++ P+ +L GH+ + V G
Sbjct: 306 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLG 365
Query: 576 --FNYLASTSTDGCIGFWKYK 594
+N A+ S D WKYK
Sbjct: 366 PEYNVFATGSGDCKARIWKYK 386
Score = 64.8 bits (156), Expect = 4e-11
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNI------L 532
V V + E I++G+ D + W + G L L+G + +A+ N + +
Sbjct: 311 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV 370
Query: 533 LAAGTVDKTIRIWNLQTL 550
A G+ D RIW + +
Sbjct: 371 FATGSGDCKARIWKYKKI 388
Score = 64.4 bits (155), Expect = 5e-11
Identities = 42/322 (13%), Positives = 93/322 (28%), Gaps = 53/322 (16%)
Query: 550 LAPISVLVGHQGIITGVNFCP-LEVNGFNYLASTSTDGCIGFW----KYKLDIDISKTVF 604
L P + H I F L+ T+ + ++D+++ K++
Sbjct: 3 LVPYNQRANHSKPIPP--FLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLD 60
Query: 605 HEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD---------------G 649
H + + C FS G +LATG + +VY++
Sbjct: 61 HT------------SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK 107
Query: 650 VDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLP 709
L + S+ +S +G+ D IW + + I +
Sbjct: 108 DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY 167
Query: 710 HTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFV 769
+ + + + ++IWD G + V
Sbjct: 168 SL-----------------DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT-LSIEDGVTT 209
Query: 770 LESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTC 829
+ P D + + + D + +WD + N + +++ ++ DG +
Sbjct: 210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV 269
Query: 830 ALTDSYGHLLVYGLGGFKRPQN 851
+ ++ L +
Sbjct: 270 VSGSLDRSVKLWNLQNANNKSD 291
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 123 bits (307), Expect = 3e-30
Identities = 39/367 (10%), Positives = 107/367 (29%), Gaps = 37/367 (10%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK----LLATLRGCSGEISDIAID-- 527
H + +F V V+ + D +K+W + + + +D
Sbjct: 12 AHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 528 -------NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG----- 575
L+A + + + + ++ + + +
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 576 ------FNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE------RIRPGNAHILC 623
+ L +T G WK+ D S ++ E +
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATS 189
Query: 624 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHS---DKVDSIQWSHSHLRFVS 680
S GL +ATG + V++ ++ + + + S+++S
Sbjct: 190 VDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 740
+ +++ ++ ++ + E V ++++ S + +
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS-A 307
Query: 741 NFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 800
++ +++ WD + + L H +++ + E S G+ + + +
Sbjct: 308 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 367
Query: 801 GYKWFHN 807
G N
Sbjct: 368 GMGADLN 374
Score = 70.7 bits (171), Expect = 6e-13
Identities = 41/327 (12%), Positives = 93/327 (28%), Gaps = 45/327 (13%)
Query: 548 QTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEP 607
+A + H I V+ C ++ S S DG + W D + +
Sbjct: 2 VFIATANAGKAHDADIFSVSACN------SFTVSCSGDGYLKVW----DNKLLDNENPKD 51
Query: 608 VMFNERIRPGNAHILC-----SSFSPGGLFLATGSGDHHVRVYKMDGVD-------SPLG 655
++ + H + + +AT S + Y++ D L
Sbjct: 52 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD 111
Query: 656 ILEVEEHSDKVDSIQWSHS-----HLRFVSGSRDGTALIWYY--KCSQWRFIRLDMNTCL 708
+L+ + +++W S R V+ GT IW + + + L+ + L
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 171
Query: 709 PHTKETSDETNKKIKVTMVAWDASDRWVITA-----INFNFQIKIWDAFNGDLVQVLKGH 763
T V + T + + + +N + + +
Sbjct: 172 ELQGTVESPMTPSQFATSVDIS-ERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINN 230
Query: 764 TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGE--------- 814
+N + ++ P S + A + ++ ++ +
Sbjct: 231 SNSIRSVKFSPQGSLL-AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 289
Query: 815 GALFDGKWSPDGTTCALTDSYGHLLVY 841
+ ++ G T G L +
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFW 316
Score = 48.3 bits (113), Expect = 6e-06
Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 27/147 (18%)
Query: 503 WRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGI 562
+ S + ++ ++ L + D +R W+++T I+ L H
Sbjct: 274 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD 333
Query: 563 ITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHIL 622
I + LA G + K ++
Sbjct: 334 IEIEEDILAVDEHGDSLAEP------GVFDVKFLKKGWRSG------------------- 368
Query: 623 CSSFSPGGLFLATGSGDHHVRVYKMDG 649
+ L D +R ++ G
Sbjct: 369 --MGADLNESLCCVCLDRSIRWFREAG 393
Score = 40.2 bits (92), Expect = 0.002
Identities = 20/147 (13%), Positives = 45/147 (30%), Gaps = 15/147 (10%)
Query: 446 REYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRA 505
Y + S + + H S V + F+ GE + + D ++ W
Sbjct: 259 TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 318
Query: 506 RDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITG 565
+ + + TL +I + + G +++++ L G+
Sbjct: 319 KTKERITTLNMHCDDIEIEE--DILAVDEHGDSLAEPGVFDVKFLKKG----WRSGMGAD 372
Query: 566 VNFCPLEVNGFNYLASTSTDGCIGFWK 592
+N L D I +++
Sbjct: 373 LN---------ESLCCVCLDRSIRWFR 390
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 113 bits (283), Expect = 2e-27
Identities = 55/355 (15%), Positives = 119/355 (33%), Gaps = 49/355 (13%)
Query: 503 WRARDGKLLATLRGCSGEI-SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQG 561
WR + K L+G + + + + +G+ D T+++W+ T + LVGH G
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 562 IITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHI 621
+ + + + + TV + +
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118
Query: 622 LCSSFSPGG--------------------LFLATGSGDHHVRVYKMDGVDSPLGILEVEE 661
L G + +G+ D V+V+ + + ++
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC---LHTLQG 175
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
H+++V S+Q+ H+ VSGS D + +W + T
Sbjct: 176 HTNRVYSLQFDGIHV--VSGSLDTSIRVWDVETGNCIH------------------TLTG 215
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 781
+ + D +++ + +KIWD G +Q L+G + F+ ++
Sbjct: 216 HQSLTSGMELKDNILVSGNADS-TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 274
Query: 782 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYG 836
++ DG + +WD+ + + + + G G ++ + S CA+ G
Sbjct: 275 TSSDDGTVKLWDLKTGEF--IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 327
Score = 83.7 bits (205), Expect = 2e-17
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 491 IVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTL 550
+V+GA D ++K+W L TL+G + + + D ++ +G++D +IR+W+++T
Sbjct: 150 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHV--VSGSLDTSIRVWDVETG 207
Query: 551 APISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMF 610
I L GHQ + +G+ N L S + D + W K + +
Sbjct: 208 NCIHTLTGHQSLTSGMELKD------NILVSGNADSTVKIWDIK---------TGQCLQT 252
Query: 611 NERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD--GVDSPLGILEVEEHSDKVDS 668
+ + + C F+ F+ T S D V+++ + L LE V
Sbjct: 253 LQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR 310
Query: 669 IQWSHSHLRFVSGSRDGTA----LIW 690
I+ S++ L GSR+GT L+
Sbjct: 311 IRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 71.4 bits (173), Expect = 2e-13
Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 18/179 (10%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
GH + V+ + FD G +V+G+ D I++W G + TL G S + + + +L
Sbjct: 175 GHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--IL 230
Query: 534 AAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKY 593
+G D T++IW+++ L QG + N++ ++S DG + W
Sbjct: 231 VSGNADSTVKIWDIK---TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 287
Query: 594 KLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDH----HVRVYKMD 648
K + + + S L A GS + + V D
Sbjct: 288 K-----TGEFIRN--LVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339
>d1eqfa1 a.29.2.1 (A:1359-1497) TAFII250 double bromodomain module
{Human (Homo sapiens) [TaxId: 9606]}
Length = 139
Score = 91.6 bits (227), Expect = 6e-22
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 94 VRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKI 153
V + R + ++++ + ++ + P++ PF PV+ DY KI
Sbjct: 4 VHCDYLNRPHKSI-HRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKI 62
Query: 154 VIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEE 213
+ PMDL T+RE +R Y S +F + ++ + NS YN + + ++ + + +E
Sbjct: 63 ITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN-GPKHSLTQISQSMLDLCDE 121
Query: 214 HLRRL 218
L+
Sbjct: 122 KLKEK 126
Score = 91.6 bits (227), Expect = 6e-22
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 1509 VRPTAVTRAQREAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKI 1568
V + R + ++++ + ++ + P++ PF PV+ DY KI
Sbjct: 4 VHCDYLNRPHKSI-HRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKI 62
Query: 1569 VIAPMDLGTIREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEE 1628
+ PMDL T+RE +R Y S +F + ++ + NS YN + + ++ + + +E
Sbjct: 63 ITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN-GPKHSLTQISQSMLDLCDE 121
Query: 1629 HLRRL 1633
L+
Sbjct: 122 KLKEK 126
Score = 75.4 bits (185), Expect = 2e-16
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 1360 HPRPDEWPQGDRDATCEKIITG-LEEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTT 1418
+ + D T I+ + ++ L PF PV+ Y ++ P+DL T
Sbjct: 12 PHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQT 71
Query: 1419 LRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
LR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 72 LRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 125
Score = 42.7 bits (100), Expect = 7e-05
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L TLR + R Y + + + N+ +N P ++ + ++ + DL +KE
Sbjct: 69 LQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKE 125
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 96.4 bits (238), Expect = 1e-21
Identities = 28/318 (8%), Positives = 77/318 (24%), Gaps = 17/318 (5%)
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT 549
V D LI R + + TL + + I N + G +++W++
Sbjct: 24 QPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISH 81
Query: 550 LAPISVL-----VGHQGIITGVNFCP---LEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601
S + + I P + G + D + K ++ S
Sbjct: 82 PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSA 141
Query: 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEE 661
+ + + + + S G
Sbjct: 142 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGT----ALIWYYKCSQWRFIRLDMNTCLPHTKETSDE 717
D + + ++ + +
Sbjct: 202 GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 718 TNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDS 777
+ V + + +W ++ + + W G + ++ V + D
Sbjct: 262 HLHESCVLSLKFAYCGKWFVST-GKDNLLNAWRTPYGASIFQS-KESSSVLSCDISV-DD 318
Query: 778 RVLLSAGHDGLIIIWDIL 795
+ +++ D +++++
Sbjct: 319 KYIVTGSGDKKATVYEVI 336
Score = 69.1 bits (167), Expect = 1e-12
Identities = 41/310 (13%), Positives = 86/310 (27%), Gaps = 55/310 (17%)
Query: 473 LGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLR-----GCSGEISDIAID 527
L H V V + TG +K+W + + I +
Sbjct: 48 LNHGEVVCAVTISNPTRHVYTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL 106
Query: 528 NRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGC 587
L G T+ IW+L P + + + +
Sbjct: 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 588 IGFWKYKLDI---------------------------DISKTVFHEPVMFNERIRPGNAH 620
+ + + D + + + +
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
I + P G +LA G +V V ++ D ++ H V S+++++ FVS
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY----QLHLHESCVLSLKFAYCGKWFVS 282
Query: 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 740
+D W R + +KE+S V D++++T
Sbjct: 283 TGKDNLLNAW----------RTPYGASIFQSKESSS-------VLSCDISVDDKYIVTG- 324
Query: 741 NFNFQIKIWD 750
+ + + +++
Sbjct: 325 SGDKKATVYE 334
Score = 62.1 bits (149), Expect = 2e-10
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 1/87 (1%)
Query: 461 HKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGE 520
+ N Y H S V + F G+ V+ D L+ WR G + S
Sbjct: 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSS 308
Query: 521 ISDIAIDNRNILLAAGTVDKTIRIWNL 547
+ I + + G+ DK ++ +
Sbjct: 309 VLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 56.0 bits (133), Expect = 2e-08
Identities = 22/240 (9%), Positives = 55/240 (22%), Gaps = 20/240 (8%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVD--SPLGILEVEEHSDKVDSIQWSHSHLRF 678
+ + S + TG V+V+ + SP+ L+ + + S +
Sbjct: 54 VCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTL 112
Query: 679 VSGSRDGTALIWYYKCSQWRFIR-----------------LDMNTCLPHTKETSDETNKK 721
+ G T IW R + +
Sbjct: 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 781
+ +D I+ + + + ++ + +
Sbjct: 173 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGY 232
Query: 782 SAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 841
+ L + + + + E + K++ G T L +
Sbjct: 233 CPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 292
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 96.5 bits (238), Expect = 1e-21
Identities = 56/354 (15%), Positives = 123/354 (34%), Gaps = 44/354 (12%)
Query: 474 GHLSAVF-CVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNIL 532
GH+++V C+ F+ ++TGADD +I+++ + + K L L G G + + + IL
Sbjct: 10 GHMTSVITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGIL 67
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
++ T + T +E Y+ + S D + WK
Sbjct: 68 VSGSTDRTVRVWDIKKGCCTHVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 593 YKLDIDISKT--------VFHEPVMFNERIRPGNAHIL-CSSFSPGGLFLATGSGDHHVR 643
+ + VFH P + H+ + S G + +GS D+ +
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 184
Query: 644 VYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLD 703
V+ + + + H+D++ S + H R +S S D T IW + + +
Sbjct: 185 VWDVAQMKCL---YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 704 MNT----------------------CLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 741
+ + ++ + ++ + +
Sbjct: 242 HTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 301
Query: 742 FNFQIKIWDAFNGDLVQV-LKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
N Q I++ +G LV + ++++ + ++ + DG + +
Sbjct: 302 EN-QFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEIL 352
Score = 53.0 bits (125), Expect = 2e-07
Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 457 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLL-ATLR 515
S + H + + + + + I+ + ++ R GKL+ A +
Sbjct: 262 DGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANIL 321
Query: 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 547
+ +I + + L+AA D + L
Sbjct: 322 KDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352
Score = 43.7 bits (101), Expect = 2e-04
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 759 VLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALF 818
L+GH V F+ +++ D +I ++D ++ K H +G ++
Sbjct: 7 TLRGHMTSVITCLQ--FEDNYVITGADDKMIRVYDSINKKFLLQLSGH-------DGGVW 57
Query: 819 DGKWSPDGT 827
K++ G
Sbjct: 58 ALKYAHGGI 66
Score = 40.3 bits (92), Expect = 0.002
Identities = 10/138 (7%), Positives = 34/138 (24%), Gaps = 18/138 (13%)
Query: 662 HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKK 721
H V + ++G+ D ++ +F+ H
Sbjct: 11 HMTSVITC-LQFEDNYVITGADDKMIRVY--DSINKKFLL----QLSGHDGG-------- 55
Query: 722 IKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLL 781
V + + A +++ ++ + + + ++
Sbjct: 56 --VWALKY-AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIV 112
Query: 782 SAGHDGLIIIWDILSSKQ 799
+ D + +W +
Sbjct: 113 TGSRDNTLHVWKLPKESS 130
>d1e6ia_ a.29.2.1 (A:) GCN5 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 111
Score = 88.8 bits (220), Expect = 2e-21
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 118 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
+ +L L + PF +PV+K + PDY + PMDL T+ +L + Y+ D
Sbjct: 4 HDAAIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMED 63
Query: 178 FVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
F+ D + VF+N R YN + + Y RL +F ++ +
Sbjct: 64 FIYDARLVFNNCRMYN-GENTSYYKYANRLEKFFNNKVKEI 103
Score = 88.8 bits (220), Expect = 2e-21
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 1533 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 1592
+ +L L + PF +PV+K + PDY + PMDL T+ +L + Y+ D
Sbjct: 4 HDAAIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMED 63
Query: 1593 FVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
F+ D + VF+N R YN + + Y RL +F ++ +
Sbjct: 64 FIYDARLVFNNCRMYN-GENTSYYKYANRLEKFFNNKVKEI 103
Score = 68.0 bits (166), Expect = 4e-14
Identities = 24/91 (26%), Positives = 47/91 (51%)
Query: 1382 LEEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYRRITSAQFDVRYL 1441
L E+ + A PFL PV+ + P Y ++ P+DL+T+ + ++ Y+++ +D R +
Sbjct: 12 LTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLV 71
Query: 1442 AANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
N +N +++ KYA + +KE
Sbjct: 72 FNNCRMYNGENTSYYKYANRLEKFFNNKVKE 102
Score = 36.1 bits (83), Expect = 0.006
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L+T+ + ++ Y+++ +D R + N +N +++ KYA + +KE
Sbjct: 46 LSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGENTSYYKYANRLEKFFNNKVKE 102
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 93.8 bits (231), Expect = 3e-21
Identities = 57/338 (16%), Positives = 106/338 (31%), Gaps = 57/338 (16%)
Query: 465 NLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDI 524
+L++ + V+C+ +D + IV+G D IK+W + L G +G + +
Sbjct: 4 SLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61
Query: 525 AIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTST 584
D + V + TG L + L
Sbjct: 62 QYD-----------------ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 104
Query: 585 DGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRV 644
+G + I + + + A + F + + SGD ++V
Sbjct: 105 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIV--SASGDRTIKV 162
Query: 645 YKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 704
+ ++ + K + VSGS D T +W +C +
Sbjct: 163 W-----NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 217
Query: 705 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGD--------- 755
+ D I + ++ +IK+WD
Sbjct: 218 EELVR-------------------CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 258
Query: 756 LVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
++ L H+ VF L+ FD ++S+ HD I+IWD
Sbjct: 259 CLRTLVEHSGRVFRLQ---FDEFQIVSSSHDDTILIWD 293
Score = 59.9 bits (143), Expect = 8e-10
Identities = 28/209 (13%), Positives = 60/209 (28%), Gaps = 30/209 (14%)
Query: 624 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 683
+ +G D+ ++++ ++ + H+ V +Q+ + S
Sbjct: 19 YCLQYDDQKIVSGLRDNTIKIWD---KNTLECKRILTGHTGSVLCLQYDERVIITGSSDS 75
Query: 684 DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDAS----------- 732
I T K + ++ WD +
Sbjct: 76 TVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR-SIAVWDMASPTDITLRRVL 134
Query: 733 ------------DRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVL 780
D I + + + IK+W+ + V+ L GH + + R++
Sbjct: 135 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC---LQYRDRLV 191
Query: 781 LSAGHDGLIIIWDILSSKQRGYKWFHNIV 809
+S D I +WDI H +
Sbjct: 192 VSGSSDNTIRLWDIECGACLRVLEGHEEL 220
Score = 38.3 bits (87), Expect = 0.007
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 757 VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799
+ + V+ L+ +D + ++S D I IWD + +
Sbjct: 8 IHCRSETSKGVYCLQ---YDDQKIVSGLRDNTIKIWDKNTLEC 47
>d3d7ca1 a.29.2.1 (A:731-832) GCN5 {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 86.6 bits (214), Expect = 9e-21
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 118 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 177
+ +L + P + PF +PV K + PDY +++ P+DL T+ E LR Y +
Sbjct: 3 LYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRKL 62
Query: 178 FVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLR 216
FV D++RV N R YN S+ + L +F L+
Sbjct: 63 FVADLQRVIANCREYN-PPDSEYCRCASALEKFFYFKLK 100
Score = 86.6 bits (214), Expect = 9e-21
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 1533 WKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPID 1592
+ +L + P + PF +PV K + PDY +++ P+DL T+ E LR Y +
Sbjct: 3 LYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRKL 62
Query: 1593 FVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLR 1631
FV D++RV N R YN S+ + L +F L+
Sbjct: 63 FVADLQRVIANCREYN-PPDSEYCRCASALEKFFYFKLK 100
Score = 70.0 bits (171), Expect = 7e-15
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 1373 ATCEKIITGLEEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYRRIT 1432
T + + L ++ A PF+ PV S+ P Y V+ +P+DL T+ R ++R+Y
Sbjct: 5 TTLKNL---LAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRK 61
Query: 1433 SAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
D++ + AN ++N P S + A + +KE
Sbjct: 62 LFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKE 101
Score = 41.1 bits (96), Expect = 8e-05
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L T+ R ++R+Y D++ + AN ++N P S + A + +KE
Sbjct: 45 LKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKE 101
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 91.6 bits (225), Expect = 2e-20
Identities = 34/297 (11%), Positives = 86/297 (28%), Gaps = 19/297 (6%)
Query: 507 DGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGV 566
++L T+ G + I+ + ++ L +G+ D I W+ + + H +I +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSL 52
Query: 567 NFCP---LEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILC 623
+ ++ + F + F + ++ + +
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 624 SSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSR 683
S + V + + + ++ + D + ++S S
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP 172
Query: 684 DGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA----SDRWVITA 739
T + + L I A + ++
Sbjct: 173 SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 232
Query: 740 INFNFQIKIWD-AFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
+ + I I+ +++ L H + V L L+S+G D I W+++
Sbjct: 233 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWNVV 287
Score = 52.7 bits (124), Expect = 2e-07
Identities = 13/91 (14%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 457 MISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARD-GKLLATLR 515
+ +S + + + +++ TG+ D I ++ + K++ L
Sbjct: 196 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN 255
Query: 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWN 546
++++ + + L+++G D I+ WN
Sbjct: 256 AHKDGVNNLLWETPSTLVSSGA-DACIKRWN 285
Score = 46.9 bits (109), Expect = 1e-05
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 753 NGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799
+ ++++ + GH + L +P L+S +DG I+ W S Q
Sbjct: 2 HDEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMHQ 43
>d3dwya1 a.29.2.1 (A:1084-1197) CREB-binding protein, CBP {Human
(Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 86.2 bits (213), Expect = 2e-20
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 114 RPFNWKNECREVLETLW-VCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGD 170
+P + LE L+ P+S PFR+PVD L PDY IV PMDL TI+ +L
Sbjct: 3 KPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTG 62
Query: 171 NYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
Y+ P +V DV +F+N+ YN K S++Y ++L+E E+ + +
Sbjct: 63 QYQEPWQYVDDVWLMFNNAWLYN-RKTSRVYKFCSKLAEVFEQEIDPV 109
Score = 86.2 bits (213), Expect = 2e-20
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 1529 RPFNWKNECREVLETLW-VCPDSEPFRKPVD--KLDHPDYDKIVIAPMDLGTIREELRGD 1585
+P + LE L+ P+S PFR+PVD L PDY IV PMDL TI+ +L
Sbjct: 3 KPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTG 62
Query: 1586 NYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
Y+ P +V DV +F+N+ YN K S++Y ++L+E E+ + +
Sbjct: 63 QYQEPWQYVDDVWLMFNNAWLYN-RKTSRVYKFCSKLAEVFEQEIDPV 109
Score = 58.4 bits (141), Expect = 1e-10
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 1372 DATCEKIITGLEEVMGL-SVAEPFLVPVDIS--QYPAYAYVVEYPVDLTTLRARFQNRFY 1428
+ + ++ LE + + PF PVD P Y +V+ P+DL+T++ + Y
Sbjct: 5 EELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQY 64
Query: 1429 RRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
+ DV + NA +N S + K+ + ++ + I
Sbjct: 65 QEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDP 108
Score = 37.6 bits (87), Expect = 0.002
Identities = 11/57 (19%), Positives = 24/57 (42%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L+T++ + Y+ DV + NA +N S + K+ + ++ + I
Sbjct: 52 LSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDP 108
>d1eqfa2 a.29.2.1 (A:1498-1625) TAFII250 double bromodomain module
{Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 86.2 bits (213), Expect = 3e-20
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 125 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 184
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 18 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 77
Query: 185 VFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKDSKRGEKKIKRM 244
+ NS YN S+ + + L E + + EK I
Sbjct: 78 ILANSVKYN-GPESQYTKTAQEIVNVCYQTL------------TEYDEHLTQLEKDICTA 124
Query: 245 KRR 247
K
Sbjct: 125 KEA 127
Score = 86.2 bits (213), Expect = 3e-20
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 1540 VLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRGDNYESPIDFVKDVKR 1599
V + + PDS PF PV+K PDY K+++ PMDL TIR+ + Y+S F+ DV
Sbjct: 18 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL 77
Query: 1600 VFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRWNSHKNKENKKDSKRGEKKIKRM 1659
+ NS YN S+ + + L E + + EK I
Sbjct: 78 ILANSVKYN-GPESQYTKTAQEIVNVCYQTL------------TEYDEHLTQLEKDICTA 124
Query: 1660 KRR 1662
K
Sbjct: 125 KEA 127
Score = 75.0 bits (184), Expect = 2e-16
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1370 DRDATCEKIITGL--EEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRF 1427
D I+ + +++M + + PF PV+ P Y V+ P+DL T+R
Sbjct: 5 DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHK 64
Query: 1428 YRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 1472
Y+ S DV + AN+ K+N P S K A+ I ++ + + E
Sbjct: 65 YQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTE 109
Score = 41.5 bits (97), Expect = 1e-04
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKE 57
L T+R Y+ S DV + AN+ K+N P S K A+ I ++ + + E
Sbjct: 53 LETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTE 109
>d1wuma1 a.29.2.1 (A:715-832) P300/CAF histone acetyltransferase
bromodomain {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 85.1 bits (210), Expect = 5e-20
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 110 KKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRG 169
K+ + P + + +L+ + + PF +PV + + P Y +++ PMDL T+ E L+
Sbjct: 6 KEPRDPDQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKN 65
Query: 170 DNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 218
Y S F+ D++RVF N + YN S+ Y L +F ++
Sbjct: 66 RYYVSKKLFMADLQRVFTNCKEYN-PPESEYYKCANILEKFFFSKIKEA 113
Score = 85.1 bits (210), Expect = 5e-20
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 1525 KKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLGTIREELRG 1584
K+ + P + + +L+ + + PF +PV + + P Y +++ PMDL T+ E L+
Sbjct: 6 KEPRDPDQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKN 65
Query: 1585 DNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRL 1633
Y S F+ D++RVF N + YN S+ Y L +F ++
Sbjct: 66 RYYVSKKLFMADLQRVFTNCKEYN-PPESEYYKCANILEKFFFSKIKEA 113
Score = 72.0 bits (176), Expect = 2e-15
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 1370 DRDATCEKIITGLEEVMGLSVAEPFLVPVDISQYPAYAYVVEYPVDLTTLRARFQNRFYR 1429
D D + + L++V A PF+ PV ++ P Y V+ +P+DL T+ R +NR+Y
Sbjct: 10 DPDQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYV 69
Query: 1430 RITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNPVD 1477
D++ + N +++N P S K A I+ IKE +D
Sbjct: 70 SKKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAGLID 117
Score = 42.7 bits (100), Expect = 4e-05
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1 LTTLRARFQNRFYRRITSAQFDVRYLAANAEKFNEPHSNIVKYARIITDLLLRIIKEPNP 60
L T+ R +NR+Y D++ + N +++N P S K A I+ IKE
Sbjct: 56 LKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAGL 115
Query: 61 VD 62
+D
Sbjct: 116 ID 117
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 88.9 bits (218), Expect = 2e-19
Identities = 40/299 (13%), Positives = 78/299 (26%), Gaps = 15/299 (5%)
Query: 508 GKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV-GHQGIITGV 566
G + G + I+ ++ L + + I W++ T V H +ITG+
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 567 NFCPLEVNGFN--------YLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGN 618
A S KL +
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 619 AHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRF 678
I S + V + V + S S + H
Sbjct: 122 IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE 181
Query: 679 VSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVIT 738
++ + Q R + T+ T KV V+W + + T
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 739 AINFNFQIKIWDAFNGDLVQVLK---GHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
+ + + +W+ ++ + V + + ++SAG D I W++
Sbjct: 242 G-SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL--NETTIVSAGQDSNIKFWNV 297
Score = 53.1 bits (125), Expect = 1e-07
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 754 GDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799
G + QV GH + L S D + L SA +G I WDI +
Sbjct: 2 GSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGIS 46
Score = 43.4 bits (100), Expect = 2e-04
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 491 IVTGADDLLIKLWRARDGKLLATLR---GCSGEISDIAIDNRNILLAAGTVDKTIRIWNL 547
+ TG+ D + +W + ++ + N +++AG D I+ WN+
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQ-DSNIKFWNV 297
Score = 31.9 bits (70), Expect = 0.80
Identities = 10/57 (17%), Positives = 20/57 (35%)
Query: 448 YSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWR 504
+G L S+++ + + + H + + IV+ D IK W
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 89.1 bits (219), Expect = 5e-19
Identities = 41/358 (11%), Positives = 96/358 (26%), Gaps = 33/358 (9%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGK--LLATLRGCSGEISDIAIDNRNIL 532
+ + C ++K I ++ + ++ K + L+ +G+++ + +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 533 LAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWK 592
+ D+ +W L+ LV + + S S I +++
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125
Query: 593 YKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGL-----FLATGSGDHHVRVYKM 647
+ D + K + + +L ++ S +
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185
Query: 648 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTC 707
+ + E V + +S + R S D T +
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP 245
Query: 708 LPHTKETSDET----------------NKKIKVTMVAW-DASDRWVITAINFNFQIKIWD 750
L ++ + + K++ D + + + + D
Sbjct: 246 LLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD 305
Query: 751 AF------NGDLVQVLKGHTNEVF---VLESHPFDSRVLLSAGHDGLIIIWDILSSKQ 799
+ H N V VL + G DG + IWD+ S +
Sbjct: 306 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363
Score = 84.9 bits (208), Expect = 1e-17
Identities = 49/284 (17%), Positives = 92/284 (32%), Gaps = 20/284 (7%)
Query: 521 ISDIAIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQGIITGVNFCPLEVNGFNY 578
IS A + +A + + I+ + L H G +TGV++ P + N
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP---DS-NR 65
Query: 579 LASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSG 638
+ + TD W K V +R + S
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-------- 117
Query: 639 DHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW--YYKCSQ 696
Y D + + V S+ W + + +GS D I+ Y K +
Sbjct: 118 -VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE 176
Query: 697 WRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDL 756
R + +P + + ++ V V + A+ V + + + + DA
Sbjct: 177 ERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-TVCLADADKKMA 235
Query: 757 VQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 800
V L T + + S L++AGHD +++ S+ +
Sbjct: 236 VATLASETLPLLAVTFITESS--LVAAGHDCFPVLFTYDSAAGK 277
Score = 78.7 bits (192), Expect = 1e-15
Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 2/246 (0%)
Query: 621 ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVS 680
I C +++ +A +H V +Y+ G + + + E++EH+ +V + W+ R V+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSG-NKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 681 GSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAI 740
D A +W K W+ + + KK V +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV-ISICYFEQE 127
Query: 741 NFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 800
N + K V L H N V + + SA + +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187
Query: 801 GYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRELFFHT 860
G + +S +G+ A + + + E
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247
Query: 861 DYRTLN 866
+
Sbjct: 248 AVTFIT 253
Score = 49.5 bits (116), Expect = 3e-06
Identities = 28/225 (12%), Positives = 56/225 (24%), Gaps = 22/225 (9%)
Query: 437 HNTVNVLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGAD 496
+ + + K + + V V F G + +
Sbjct: 162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 221
Query: 497 DLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL 556
D + L A +ATL + + + + L+AAG D ++ + A
Sbjct: 222 DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSF 280
Query: 557 VGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRP 616
G + + G + H+
Sbjct: 281 GGRLDVPKQSSQR-----GLTARERFQNLDKKASSEGSAAAGAGLDSLHK---------- 325
Query: 617 GNAHILCSSFSPGG----LFLATGSGDHHVRVYKMDGVDSPLGIL 657
+ S GG T D + ++ + ++S L L
Sbjct: 326 --NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDL 368
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 83.7 bits (205), Expect = 2e-17
Identities = 27/348 (7%), Positives = 83/348 (23%), Gaps = 24/348 (6%)
Query: 489 EVIVTGADDLLIKLWRARDGKLLATLRGCS--GEISDIAID-NRNILLAAGTVDKTIRIW 545
+ I+ A + + + + + I A +++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 546 NLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFH 605
+L T + + + ++ + + ++
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 606 EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 665
+ + I +++ G L D HV + +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDK------PIQSW 175
Query: 666 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKV- 724
L + + + ++ D ET +
Sbjct: 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235
Query: 725 -----TMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRV 779
A + A ++ +D ++ + + + + D
Sbjct: 236 VRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVST-DGST 293
Query: 780 LLSAGHDGLIIIWDILSSKQRGYKWFHNI-VEGQGEGALFDGK-WSPD 825
+ G G + +D + +++G + + G +L + ++ D
Sbjct: 294 VWLGGALGDLAAYDAETLEKKG-----QVDLPGNASMSLASVRLFTRD 336
Score = 45.2 bits (105), Expect = 6e-05
Identities = 6/103 (5%), Positives = 23/103 (22%), Gaps = 7/103 (6%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILL 533
F + +++ + + + + + +
Sbjct: 238 IMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTV 294
Query: 534 AAGTVDKTIRIWNLQTLAPISVLV----GHQGIITGVNFCPLE 572
G + ++ +TL + + + F E
Sbjct: 295 WLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRDE 337
Score = 33.2 bits (74), Expect = 0.32
Identities = 14/175 (8%), Positives = 37/175 (21%), Gaps = 5/175 (2%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWR----ARDGKLLATLRGCSGEISDIAIDNRN 530
+ + + + G + DL + D + + + +A+ N++
Sbjct: 133 APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192
Query: 531 ILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGF 590
++ P + G + +
Sbjct: 193 ESSGVMATPFYTARKDIDPADPTAYRTGLL-TMDLETGEMAMREVRIMDVFYFSTAVNPA 251
Query: 591 WKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVY 645
F + + P + S G + G + Y
Sbjct: 252 KTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
Score = 31.3 bits (69), Expect = 1.0
Identities = 29/278 (10%), Positives = 58/278 (20%), Gaps = 28/278 (10%)
Query: 425 GTSLLVPNS----VKVHNTVN--VLRSREYSGPLSRSLMISSHKYSNLRQHYVNLGHLSA 478
G + + + V L + S P R + S +
Sbjct: 45 GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT--------- 95
Query: 479 VFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTV 538
+ E+ + L+ A +I+ +A L
Sbjct: 96 LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA-FEAPRQITMLAWARDGSKLYGLGR 154
Query: 539 DKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDID 598
D + TL V + I + + + + G + Y D
Sbjct: 155 DLHVMDPEAGTL------VEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKD 208
Query: 599 ISKTVFHEPVMFNERIRPGNAHILCSSFSP-GGLFLATGSGDHHVRVYKMDGVDS----- 652
I + + + +T R + V
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLE 268
Query: 653 PLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW 690
++ S+ S G G +
Sbjct: 269 KNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 81.5 bits (199), Expect = 7e-17
Identities = 35/309 (11%), Positives = 69/309 (22%), Gaps = 30/309 (9%)
Query: 510 LLATL-RGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNF 568
L +L R G + + ++ + +L + H T
Sbjct: 8 LFPSLPRTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKT 66
Query: 569 CPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKT-----------------------VFH 605
P Y AS G + W I KT V
Sbjct: 67 SP----SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGE 122
Query: 606 EPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDK 665
F + + D+ + I E K
Sbjct: 123 GRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK 182
Query: 666 VDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVT 725
+ + + + +D ++ V
Sbjct: 183 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 242
Query: 726 MVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGH 785
+ W + +A + + IKIW+ + + + T + + L+S
Sbjct: 243 GLTWSPDGTKIASA-SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 301
Query: 786 DGLIIIWDI 794
+G I +
Sbjct: 302 NGFINFVNP 310
Score = 52.6 bits (124), Expect = 2e-07
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Query: 460 SHKYSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSG 519
+ N+ H +VF + + G I + + D IK+W K+ T+ +
Sbjct: 222 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 281
Query: 520 -EISDIAIDNRNILLAAGTVDKTIRIWNL 547
E + I L + + + I N
Sbjct: 282 IEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 43.0 bits (99), Expect = 3e-04
Identities = 37/289 (12%), Positives = 75/289 (25%), Gaps = 27/289 (9%)
Query: 464 SNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDG--KLLATLRGCSGEI 521
+L + H G +G +++W L T+ SG +
Sbjct: 46 GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPV 105
Query: 522 SDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLAS 581
DI+ D+ + +AA + S + F ++
Sbjct: 106 KDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISG 165
Query: 582 TSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 641
+ + F + + V G+ L+
Sbjct: 166 SDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG 225
Query: 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 701
V + HS V + WS + S S D T IW
Sbjct: 226 VFEDDSL---------KNVAHSGSVFGLTWSPDGTKIASASADKTIKIW----------- 265
Query: 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWD 750
++ T E + +I+ + + + +++ + N I +
Sbjct: 266 -NVATL---KVEKTIPVGTRIEDQQLGIIWTKQALVSI-SANGFINFVN 309
Score = 38.7 bits (88), Expect = 0.005
Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 13/73 (17%)
Query: 577 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAH-ILCSSFSPGGLFLAT 635
+AS S D I W ++ K + I G L +
Sbjct: 251 TKIASASADKTIKIW----NVATLKVE--------KTIPVGTRIEDQQLGIIWTKQALVS 298
Query: 636 GSGDHHVRVYKMD 648
S + + +
Sbjct: 299 ISANGFINFVNPE 311
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 79.2 bits (193), Expect = 5e-16
Identities = 34/314 (10%), Positives = 77/314 (24%), Gaps = 44/314 (14%)
Query: 519 GEISDIAIDNRNILLAAGTVDKT-IRIWNL--QTLAPISVLVGHQG-IITGVNFCPLEVN 574
+ ++ D +A +R + + P+ GH ++T V F P++
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK-G 76
Query: 575 GFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLA 634
YL S G + W + D + V + I S+ G L
Sbjct: 77 S-QYLCSGDESGKVIVWGWTFDKES----NSVEVNVKSEFQVLAGPISDISWDFEGRRLC 131
Query: 635 TGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKC 694
+ +R ++ DG+ + +
Sbjct: 132 VVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP 191
Query: 695 SQWRFIRLDM-------NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ-- 745
++ + +D + I + +
Sbjct: 192 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV 251
Query: 746 -----------------------IKIWDAFNGDLVQVLKGHTNEVFVLES--HPFDSRVL 780
I++WD VQ ++ + + +
Sbjct: 252 QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI 311
Query: 781 LSAGHDGLIIIWDI 794
+S DG + +++
Sbjct: 312 ISLSLDGTLNFYEL 325
Score = 53.8 bits (127), Expect = 9e-08
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID---NRNILLAAGTVDKTIRI 544
+ T D I++W K + ++ + + N + + ++D T+
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322
Query: 545 WNL 547
+ L
Sbjct: 323 YEL 325
Score = 52.2 bits (123), Expect = 3e-07
Identities = 26/194 (13%), Positives = 56/194 (28%), Gaps = 12/194 (6%)
Query: 618 NAHILCSSFSPGGLFLATGSGDH-HVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS--HS 674
S+ P +A G VR P + S V ++++S
Sbjct: 17 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG 76
Query: 675 HLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDA-SD 733
SG G +I + +++N ++ ++WD
Sbjct: 77 SQYLCSGDESGK-VIVWGWTFDKESNSVEVNVKSEFQVLAGP-------ISDISWDFEGR 128
Query: 734 RWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWD 793
R + + +G+ + + GH+ + ++ G DG ++ +
Sbjct: 129 RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQ 188
Query: 794 ILSSKQRGYKWFHN 807
K H+
Sbjct: 189 GPPFKFSASDRTHH 202
Score = 29.1 bits (63), Expect = 5.7
Identities = 15/78 (19%), Positives = 21/78 (26%), Gaps = 6/78 (7%)
Query: 763 HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKW 822
N L P + + G + D SK F G G + K+
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQF----TGHGSSVVTTVKF 71
Query: 823 SP--DGTTCALTDSYGHL 838
SP D G +
Sbjct: 72 SPIKGSQYLCSGDESGKV 89
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 77.6 bits (189), Expect = 2e-15
Identities = 36/334 (10%), Positives = 75/334 (22%), Gaps = 48/334 (14%)
Query: 509 KLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLV---GHQGIITG 565
+++ + ISDI I LL + D ++ ++ A L+ ++ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 566 VNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNE------------- 612
NF N + + G I +E +
Sbjct: 62 CNFID---NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAA 118
Query: 613 ------------------------RIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK-M 647
+ L G + V+ ++
Sbjct: 119 SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178
Query: 648 DGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTC 707
D I E D + S DG + ++ Q
Sbjct: 179 LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD-DQGDDYNSSKRFA 237
Query: 708 LPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEV 767
+ +TN V + + + + I W+ ++ +
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFS-PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS 296
Query: 768 FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRG 801
V + +L A D +
Sbjct: 297 VVKIA--CSDNILCLATSDDTFKTNAAIDQTIEL 328
Score = 61.0 bits (146), Expect = 5e-10
Identities = 34/284 (11%), Positives = 73/284 (25%), Gaps = 47/284 (16%)
Query: 618 NAH---ILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWS-H 673
A I P L S D + VYK D + +L+ + + + +
Sbjct: 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67
Query: 674 SHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASD 733
+ L+ G+ G L S + L + +K I +
Sbjct: 68 TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVI 127
Query: 734 RWVITAINFNF--------------------------------QIKIWDAFNGDLVQV-- 759
Q++ + +
Sbjct: 128 DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTI 187
Query: 760 -LKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDI-------LSSKQRGYKWFHNIVEG 811
G ++ + P + + DG + + SSK+ ++ ++
Sbjct: 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247
Query: 812 QGEGALFDG-KWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPR 854
+ ++SP S G + + L K+ +N +
Sbjct: 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 73.2 bits (178), Expect = 6e-14
Identities = 28/348 (8%), Positives = 77/348 (22%), Gaps = 37/348 (10%)
Query: 524 IAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL-VGHQGIITGVNFCPLEVNGFNYLAST 582
A+ + + + + ++ + + + P +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP---DNRTAYVLN 58
Query: 583 STDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHV 642
+ G I D+ + + + SP G +
Sbjct: 59 NHYGDIYGI------DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQR 112
Query: 643 RVYKMDGVDSPLGILEVEE-HSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQW---- 697
L + + K + + + DG+ + +
Sbjct: 113 LNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKT 172
Query: 698 -----------RFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQI 746
+ + + ++ + +A D+ + +
Sbjct: 173 GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 232
Query: 747 KIWDAFNGDLVQVLKG-HTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWF 805
D G T F P D + + + +D+ + K
Sbjct: 233 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR--LAKYDL-----KQRKLI 285
Query: 806 HNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIP 853
+ + G L ++ L V+ ++ +NI
Sbjct: 286 KAANLDHTYYCVA---FDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330
Score = 69.4 bits (168), Expect = 1e-12
Identities = 25/327 (7%), Positives = 71/327 (21%), Gaps = 20/327 (6%)
Query: 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSG-EISDIAID-NRNILLAAGTVDKTIRIW 545
E ++ + + + + + + I
Sbjct: 8 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 67
Query: 546 NLQTLAPI-SVLVGHQGIITGVNFCPLEVNGF-NYLASTSTDGCIGFWKYKLDIDISKTV 603
+L T + G + ++ + +T Y + +
Sbjct: 68 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 127
Query: 604 FHEPVMFNERIRPGNAH--ILCSSFSPGGLFLATGSGDHHVRVYKMDGV------DSPLG 655
+ + +R + + G G + + V +
Sbjct: 128 STADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRK 187
Query: 656 ILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRL-DMNTCLPHTKET 714
+ H + +R D+ T HT+E
Sbjct: 188 GYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF 247
Query: 715 SDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHP 774
+D T D ++ +D L++ + + +
Sbjct: 248 ADLTEL---YFTGLRSPKDPNQ--IYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDK 301
Query: 775 FDSRVLLSAGHDGLIIIWDILSSKQRG 801
L G + +++ + ++
Sbjct: 302 -KGDKLYLGGTFNDLAVFNPDTLEKVK 327
Score = 42.8 bits (99), Expect = 3e-04
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 5/97 (5%)
Query: 475 HLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLA 534
F L + G + + + + KL+ +A D + L
Sbjct: 250 LTELYFTGLRSPKDPNQIYGVLNR-LAKYDLKQRKLIKAANLDHT-YYCVAFDKKGDKLY 307
Query: 535 AGTVDKTIRIWNLQTLAPISVL---VGHQGIITGVNF 568
G + ++N TL + + G T F
Sbjct: 308 LGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVF 344
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 69.1 bits (167), Expect = 2e-12
Identities = 32/330 (9%), Positives = 72/330 (21%), Gaps = 29/330 (8%)
Query: 471 VNLGHLSAVFCVLFDKLGEVIVTGADD--LLIKLWRARDGKLLATLRGCSGEISDIAIDN 528
+ + + V +V + ++ R GK G + + +D
Sbjct: 37 LKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDR 95
Query: 529 RNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCI 588
I +L+T P + + +IT +
Sbjct: 96 NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG-------FPL 148
Query: 589 GFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMD 648
+ + + V+ N+H +F L S
Sbjct: 149 KHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 208
Query: 649 GVD----SPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM 704
++ + + + + +G D + M
Sbjct: 209 VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM 268
Query: 705 NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHT 764
L I + V + +D +
Sbjct: 269 IIPLES----------SILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVK 314
Query: 765 NEVFVLESHPFDSRVLLSAGHDGLIIIWDI 794
N + L D + ++ DG I + +
Sbjct: 315 NNLTDLRLSA-DRKTVMVRKDDGKIYTFPL 343
Score = 51.0 bits (120), Expect = 8e-07
Identities = 22/247 (8%), Positives = 51/247 (20%), Gaps = 11/247 (4%)
Query: 616 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSH 675
P I + D + EE+ V ++ +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNG 97
Query: 676 LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRW 735
V ++ + + +A+ +
Sbjct: 98 KFAVVA-------NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 150
Query: 736 VITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDIL 795
T I ++D + ++++ + DS+ L + L D +
Sbjct: 151 GETDGYVMQAIHVYDMEGRKIFAATTENSHDYA--PAFDADSKNLYYLSYRSLDPSPDRV 208
Query: 796 SSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRPQNIPRE 855
V G+ K P T + + + R
Sbjct: 209 VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM 268
Query: 856 LFFHTDY 862
+
Sbjct: 269 IIPLESS 275
Score = 50.2 bits (118), Expect = 2e-06
Identities = 17/194 (8%), Positives = 44/194 (22%), Gaps = 28/194 (14%)
Query: 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKL-------LATLRGCSG 519
R+ + S + FD + + + L + G
Sbjct: 169 RKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPG 228
Query: 520 EISDIAIDNRNILLAAGTVDKT----IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNG 575
+ + R++ AG D +++ + I +
Sbjct: 229 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA 288
Query: 576 FNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLAT 635
Y G + + D+ K + ++ S +
Sbjct: 289 A-YYQGAPEKGVLLKY----DVKTRKVTEVK------------NNLTDLRLSADRKTVMV 331
Query: 636 GSGDHHVRVYKMDG 649
D + + ++
Sbjct: 332 RKDDGKIYTFPLEK 345
Score = 46.8 bits (109), Expect = 2e-05
Identities = 6/94 (6%), Positives = 24/94 (25%), Gaps = 4/94 (4%)
Query: 463 YSNLRQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEIS 522
+ R + + + + ++ + + K+ ++
Sbjct: 263 PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLT 318
Query: 523 DIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVL 556
D+ + + D I + L+ +
Sbjct: 319 DLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 64.2 bits (155), Expect = 4e-11
Identities = 26/295 (8%), Positives = 67/295 (22%), Gaps = 37/295 (12%)
Query: 488 GEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI------DNRNILLAAGTVDKT 541
G ++++ + + + L +
Sbjct: 38 FSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPA 97
Query: 542 IRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISK 601
+ + ++ + V P G + + G K +
Sbjct: 98 ASVTVIDAVSKKML--SEIDTAACVLAYP---AGDDRFTALCESG-----KALTVTLDAN 147
Query: 602 TVFHEPVMFNERIRPGNAHILCSSFSPGGLF---LATGSGDHHVRVYKMDGVDSPLGILE 658
+ M + I +F + + +VR G D P
Sbjct: 148 GKEAKRTMSDAFIDV----DKDPAFVNASRYKGDYLFTTYGGNVRSADFSG-DKPAFGKP 202
Query: 659 VEEHSDKVDSIQWSHSHLRFVSGSRDGTALIW---------YYKCSQWRFIRLDMNTCLP 709
+D + W ++ + + ++ +
Sbjct: 203 WSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSK--- 259
Query: 710 HTKETSDETNKKIK-VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 763
D +K++ + + D+ + + + + DA G L V K
Sbjct: 260 QRVARWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLVVMDARTGALQHVEKQI 314
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 61.5 bits (148), Expect = 6e-10
Identities = 42/374 (11%), Positives = 91/374 (24%), Gaps = 23/374 (6%)
Query: 467 RQHYVNLGHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI 526
+ V D VT D I L K++ + + +
Sbjct: 11 WKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYAVHISRM 69
Query: 527 DNRNILLAAGTVDKTIRIWNLQT-----LAPISVLVGHQGIITGVNFCPLEVNGFNYLAS 581
L D I + +L +A I + + + + + +A
Sbjct: 70 SASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGY---EDRYTIAG 126
Query: 582 TSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHH 641
+ + + P + F+
Sbjct: 127 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186
Query: 642 VRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIR 701
V + D + + + W SH R+ + + + + R
Sbjct: 187 VLLVNYK--DIDNLTVTSIGAAPFLADGGWDSSH-RYFMTAANNSNKVAVIDSKDRRLSA 243
Query: 702 LDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK 761
L PH ++ + K D + + V L+
Sbjct: 244 LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA---WKKVAELQ 300
Query: 762 GHTNEVFVLESHP------FDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEG 815
G +++HP D+ A + ++D+ + + GEG
Sbjct: 301 GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 360
Query: 816 A--LFDGKWSPDGT 827
A + +++ G
Sbjct: 361 AKRVVQPEYNKRGD 374
Score = 42.6 bits (99), Expect = 4e-04
Identities = 21/137 (15%), Positives = 40/137 (29%), Gaps = 7/137 (5%)
Query: 719 NKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSR 778
+ K + D + + +T + QI + D + +V+V+ V + R
Sbjct: 18 EDRPKKQLNDLDLPNLFSVTLRDAG-QIALVDGDSKKIVKVIDTG-YAVHISRMSA-SGR 74
Query: 779 VLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQG-EGALFDGKWSPDGTTCALTDSYGH 837
LL G D I + D+ + + I G + +
Sbjct: 75 YLLVIGRDARIDMIDLWAKEP---TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 131
Query: 838 LLVYGLGGFKRPQNIPR 854
G P+ I
Sbjct: 132 QFAIMDGETLEPKQIVS 148
Score = 36.1 bits (82), Expect = 0.040
Identities = 37/253 (14%), Positives = 71/253 (28%), Gaps = 50/253 (19%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE---EHSDKVDSIQWSHSHLRFVSGS 682
S G +L D + + + P + E++ E S + ++G+
Sbjct: 69 MSASGRYLLVIGRDARIDMIDLWA-KEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA 127
Query: 683 RDGTALIWYYKCSQWRFIRLDMNTCLPHTKE---------------------TSDETNKK 721
+ + T+ ET K
Sbjct: 128 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 187
Query: 722 IKVTM-------------------VAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKG 762
+ V WD+S R+ +TA N + ++ + D+ + L ++
Sbjct: 188 LLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 247
Query: 763 HTNEVFVLESHPFDSR----VLLSAGHDGLIIIWDILSSKQRGYKW-FHNIVEGQGEGAL 817
++ + S DG I + Y W ++GQG G+L
Sbjct: 248 GKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSL 307
Query: 818 FDGKWSPDGTTCA 830
F K P +
Sbjct: 308 FI-KTHPKSSHLY 319
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 55.3 bits (131), Expect = 3e-08
Identities = 22/285 (7%), Positives = 65/285 (22%), Gaps = 18/285 (6%)
Query: 490 VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAID-NRNILLAAGTVDKTIRIWNLQ 548
+ ++ I + K+ AT+ I + + A + I +
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62
Query: 549 TLAPISVLVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPV 608
T I+ + + +G + + + +
Sbjct: 63 TNNVIA----TVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSP 118
Query: 609 MFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVE-----EHS 663
+ G + ++ + T + V +
Sbjct: 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD 178
Query: 664 DKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIK 723
S+ + ++ + + + +++ TNK
Sbjct: 179 SMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA 238
Query: 724 -------VTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLK 761
+A + V A++F + + D + +
Sbjct: 239 RIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 52.1 bits (123), Expect = 3e-07
Identities = 39/314 (12%), Positives = 76/314 (24%), Gaps = 23/314 (7%)
Query: 529 RNILLAAGTVDKTIRIWNLQTLAPISVL--VGHQGIITGVNFCPLEVNGFNYLASTSTDG 586
+ + A + I +WNL +++ V G + + P + +
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP---DKRYLYVGVRPEF 59
Query: 587 CIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATGSGDHHVRVYK 646
+ + I+ + HI S G F+ GS +
Sbjct: 60 RVLAY------RIAPDDGALTFAAESALPGSLTHI---STDHQGQFVFVGSYNAGNVSVT 110
Query: 647 MDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGTALIWYYKCSQWRFIRLDM-- 704
P+G+++V E D S S + + + + + D
Sbjct: 111 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 170
Query: 705 -NTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQIKIWDAFNGDLVQVLKGH 763
T + V S V + + I+ + +
Sbjct: 171 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM--MPENFSD 228
Query: 764 TNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWS 823
T + P + LI ++ + K E Q G
Sbjct: 229 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNV----D 284
Query: 824 PDGTTCALTDSYGH 837
G H
Sbjct: 285 HSGKYLIAAGQKSH 298
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 52.5 bits (125), Expect = 3e-07
Identities = 33/221 (14%), Positives = 56/221 (25%), Gaps = 22/221 (9%)
Query: 627 SPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHLRFVSGSRDGT 686
LF T + + +L+ V + S S RDG
Sbjct: 29 DLENLFSVTLRDAGQIALIDGST-YEIKTVLDTGYA---VHISRLSASGRYLFVIGRDGK 84
Query: 687 ALIWYYKCSQWRFIRLDMNT-CLPHTKETSDETNKKIKVTMVAWDASDRWVITAINFNFQ 745
+ D+ E + + T D++ I + Q
Sbjct: 85 VNMI------------DLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ 132
Query: 746 IKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILSSKQ---RGY 802
I D + ++ E HP + A H I ++ + + Y
Sbjct: 133 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 192
Query: 803 KWFHN--IVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVY 841
+N E E L DG + + LV
Sbjct: 193 TDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVV 233
Score = 40.9 bits (95), Expect = 0.001
Identities = 27/214 (12%), Positives = 57/214 (26%), Gaps = 12/214 (5%)
Query: 626 FSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEV---EEHSDKVDSIQWSH-SHLRFVSG 681
S G +L D V + + + P + E+ E S
Sbjct: 69 LSASGRYLFVIGRDGKVNMIDLW-MKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA 127
Query: 682 SRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWVITAIN 741
+I + + + I+ +E E +V + I +
Sbjct: 128 YWPPQYVIMDGETLEPKKIQSTRGMT-YDEQEYHPEP----RVAAILASHYRPEFIVNVK 182
Query: 742 FNFQIKIWDAFNGDLVQVLKGHTNEV-FVLESHPFDSRVLLSAGHDGLIIIWDILSSKQR 800
+I + D + + ++ + + +A +++ D K
Sbjct: 183 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 242
Query: 801 GYKWFHNIVEGQGEGALF-DGKWSPDGTTCALTD 833
+ G GA F + P T + D
Sbjct: 243 AIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD 276
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 49.8 bits (117), Expect = 2e-06
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 474 GHLSAVFCVLFDKLGEVIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAI--DNRNI 531
H + L + + + A+ G+ LA EI I + D + +
Sbjct: 256 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPL 314
Query: 532 LLAAGTVDKTIRIWNLQTLAPISVLVGH 559
L A T DKT+ I + ++ + +
Sbjct: 315 LYALSTGDKTLYIHDAESGEELRSVNQL 342
Score = 38.6 bits (88), Expect = 0.006
Identities = 17/141 (12%), Positives = 34/141 (24%), Gaps = 15/141 (10%)
Query: 516 GCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQT--LAPISVLVGHQGIITGVNFCPLEV 573
I+ A + L T I +L + + + +
Sbjct: 192 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR---- 247
Query: 574 NGFNYLASTSTDGCIGFWKYKLDIDI-----SKTVFHEPVMFNERIR--PGNAHILCSSF 626
G + + + S+ V ER+ I +
Sbjct: 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINV 307
Query: 627 SPGG--LFLATGSGDHHVRVY 645
S L A +GD + ++
Sbjct: 308 SQDEKPLLYALSTGDKTLYIH 328
Score = 35.5 bits (80), Expect = 0.060
Identities = 5/58 (8%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Query: 473 LGHLSAVFCVLFDKLGE--VIVTGADDLLIKLWRARDGKLLATLRGCSGEISDIAIDN 528
+ + + + + D + + A G+ L ++ I +
Sbjct: 296 FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353
Score = 35.2 bits (79), Expect = 0.065
Identities = 21/203 (10%), Positives = 38/203 (18%), Gaps = 9/203 (4%)
Query: 496 DDLLIKLWRARDGKLLATLRGCSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISV 555
+ + L + + + T
Sbjct: 127 PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT 186
Query: 556 LVGHQGIITGVNFCPLEVNGFNYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIR 615
V H +N L + G I
Sbjct: 187 EVFHPEDEFLINHPAYSQKA-GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 245
Query: 616 PGNAHILCSSFSPGGLFLATGSGDHHVRVYKMDG-----VDSPLG-ILEVEEHSDKVDSI 669
++ + +K +D+ G L E ++DSI
Sbjct: 246 WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSI 305
Query: 670 QWSH--SHLRFVSGSRDGTALIW 690
S L + + D T I
Sbjct: 306 NVSQDEKPLLYALSTGDKTLYIH 328
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 46.5 bits (109), Expect = 2e-05
Identities = 25/261 (9%), Positives = 53/261 (20%), Gaps = 37/261 (14%)
Query: 624 SSFSPGGLFLATGSGDHHVRVYKMDGV-DSPLGILEVEEHSDKVDSIQWSHSH------- 675
+ S + LG + HS
Sbjct: 28 GAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLG----AFLSLAVAGHSGSDFALAS 83
Query: 676 ---LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK---ETSDETNKKIKVTMVAW 729
R G R ++ D T LP + + +V ++
Sbjct: 84 TSFARSAKGKRTDYVEVF------------DPVTFLPIADIELPDAPRFSVGPRVHIIGN 131
Query: 730 DASDRWVITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLI 789
AS ++ + + Q+ K + HP + +
Sbjct: 132 CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI----HPGAAATHYLGSCPASL 187
Query: 790 IIWDILSSKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYGHLLVYGLGGFKRP 849
D+ ++ Q + + + G + +L +
Sbjct: 188 AASDLAAAPAAAGIVGAQCTGAQN-CSSQAAQANYPGM--LVWAVASSILQGDIPAAGAT 244
Query: 850 QNIPRELFFHTDYRTLNRPNG 870
+ R G
Sbjct: 245 MKAAIDGNESGRKADNFRSAG 265
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 39.4 bits (91), Expect = 0.004
Identities = 25/219 (11%), Positives = 61/219 (27%), Gaps = 24/219 (10%)
Query: 597 IDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFL-ATGSGDHHVRVYKMD--GVDSP 653
+S+T E + N N I F P +L + + + ++ G
Sbjct: 124 FSVSETGKLEKNVQNYE-YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL 182
Query: 654 LGILEVEEHSDKVDSIQWSHSH-LRFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTK 712
+G ++ + D + + + I Y + + + P
Sbjct: 183 VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR--ICEYVIDPATHMPVYTHHSFPLIP 240
Query: 713 ETSDETNKK-----IKVTMVAWDASDRWVITA---INFNFQIKIWDAFNGDLVQVLK-GH 763
+ + + + + A S +++ + F Q I D + K
Sbjct: 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF 300
Query: 764 TNEVFVLESHPFD--------SRVLLSAGHDGLIIIWDI 794
+ H + ++ +G + I+
Sbjct: 301 LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 37.7 bits (86), Expect = 0.009
Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 480 FCVLFDKLGEVIVT-GADDLLIKLWRARDGKLLATL--RGCSGEISDIAIDNRNILLAAG 536
V + GE+++ ++ + ++ +DG+L++ L + + D+A+ + ++ A
Sbjct: 203 IGVGINSNGEILIADNHNNFNLTIF-TQDGQLISALESKVKHAQCFDVALMDDGSVVLAS 261
Query: 537 TVDKTIRIWNLQTLAPISV 555
D + I+ LAP+ +
Sbjct: 262 K-DYRLYIYRYVQLAPVGM 279
>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 255
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 12/125 (9%)
Query: 517 CSGEISDIAIDNRNILLAAGTVDKTIRIWNLQTLAPISVLVGHQGIITGVNFCPLEVNGF 576
C G + + +L AA + R+ S G + + L++
Sbjct: 26 CGGSL----LSGDWVLTAAHCFPERNRVL--------SRWRVFAGAVAQASPHGLQLGVQ 73
Query: 577 NYLASTSTDGCIGFWKYKLDIDISKTVFHEPVMFNERIRPGNAHILCSSFSPGGLFLATG 636
+ + DI+ P+ E I+P + G + TG
Sbjct: 74 AVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTG 133
Query: 637 SGDHH 641
G+
Sbjct: 134 WGNTQ 138
>d1o8ra_ d.234.1.1 (A:) Proguanylin {Human (Homo sapiens) [TaxId:
9606]}
Length = 94
Score = 27.9 bits (62), Expect = 3.9
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 324 EAAKVLTDLVEAKNLLPERYDWEGATHSQTLAEVASSHPNVTASFLPKICQR 375
E+ K L DL E + + + + + S+PN P +C+
Sbjct: 13 ESVKKLKDLQEPQEPRVGKLRNFAPIPGEPVVPILCSNPNFPEELKP-LCKE 63
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 29.4 bits (65), Expect = 4.0
Identities = 28/213 (13%), Positives = 57/213 (26%), Gaps = 7/213 (3%)
Query: 47 ITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSEEEEEEDSKSR---QRRVRPTAVTRAQ 103
+ + + E + + Y + Y T + + E K+ Q R P
Sbjct: 43 TSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKL 102
Query: 104 REAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLG-T 162
+ + + + + + E R P + D ++ LG
Sbjct: 103 LQEVLNTIFNNNEHPDQDTVVLPKYDKSQFKGEGDRCPTGQKIKLPVDIFILEGWFLGFN 162
Query: 163 IREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRW 222
+ +N D V ++F S +N K + + RL
Sbjct: 163 PILQGIENNDLLTGDMVDVNAKLFFYSDLLWRNPEIKSLGIVFTTDNINNVYGWRL---Q 219
Query: 223 NSHKNKENKKDSKRGEKKIKRMKRRRRKIRRTL 255
H+ E+ + R + L
Sbjct: 220 QEHELISKVGKGMTDEQVHAFVDRYMPSYKLYL 252
Score = 29.4 bits (65), Expect = 4.0
Identities = 28/213 (13%), Positives = 57/213 (26%), Gaps = 7/213 (3%)
Query: 1462 ITDLLLRIIKEPNPVDVPVVYHELLQNYETSSSEEEEEEDSKSR---QRRVRPTAVTRAQ 1518
+ + + E + + Y + Y T + + E K+ Q R P
Sbjct: 43 TSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKL 102
Query: 1519 REAMNQKKLKRPFNWKNECREVLETLWVCPDSEPFRKPVDKLDHPDYDKIVIAPMDLG-T 1577
+ + + + + + E R P + D ++ LG
Sbjct: 103 LQEVLNTIFNNNEHPDQDTVVLPKYDKSQFKGEGDRCPTGQKIKLPVDIFILEGWFLGFN 162
Query: 1578 IREELRGDNYESPIDFVKDVKRVFHNSRNYNQNKRSKIYIMTTRLSEFAEEHLRRLTVRW 1637
+ +N D V ++F S +N K + + RL
Sbjct: 163 PILQGIENNDLLTGDMVDVNAKLFFYSDLLWRNPEIKSLGIVFTTDNINNVYGWRL---Q 219
Query: 1638 NSHKNKENKKDSKRGEKKIKRMKRRRRKIRRTL 1670
H+ E+ + R + L
Sbjct: 220 QEHELISKVGKGMTDEQVHAFVDRYMPSYKLYL 252
>d2zjrl1 c.55.4.1 (L:8-111) Ribosomal protein L18 (L18p) {Deinococcus
radiodurans [TaxId: 1299]}
Length = 104
Score = 27.9 bits (62), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 1657 KRMKRRRRKIRRTLVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAESGNEQ 1710
+R R RRK+R T S LS R K Y D + G+T A S +
Sbjct: 1 RRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDS-RGQTLAAASSAALK 53
Score = 27.5 bits (61), Expect = 5.0
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 242 KRMKRRRRKIRRTLVESDDEVLSRKRRGKSTYENDFDFNPAGETKTKAEKFLM 294
+R R RRK+R T S LS R K Y D + G+T A +
Sbjct: 1 RRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDS-RGQTLAAASSAAL 52
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 29.1 bits (63), Expect = 4.5
Identities = 22/220 (10%), Positives = 57/220 (25%), Gaps = 21/220 (9%)
Query: 617 GNAHILCSSFSPGGLFLATGSGDHHVRVYKMDGVDSPLGILEVEEHSDKVDSIQWSHSHL 676
++ ++SP G LA + + + + V + H
Sbjct: 37 SPQPLMSPAWSPDGSKLAYVTFESGRSALVI-----------QTLANGAVRQVASFPRHN 85
Query: 677 RFVSGSRDGTALIWYYKCSQWRFIRLDMNTCLPHTKETSDETNKKIKVTMVAWDASDRWV 736
+ S DG+ L + + + + + D+ +
Sbjct: 86 GAPAFSPDGSKLAFALSKTGSLNLY--VMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAF 143
Query: 737 ITAINFNFQIKIWDAFNGDLVQVLKGHTNEVFVLESHPFDSRVLLSAGHDGLIIIWDILS 796
+ Q+ + G ++ + S +++ + + G I
Sbjct: 144 TSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDL 202
Query: 797 SKQRGYKWFHNIVEGQGEGALFDGKWSPDGTTCALTDSYG 836
+ ++ +P+GT + S G
Sbjct: 203 ATGGVQVLSSTFLD-------ETPSLAPNGTMVIYSSSQG 235
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 27.7 bits (61), Expect = 6.2
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 216 RRLTVRWNSHKNKENKKDSKRGEKKIKRMKRR 247
R L V + + K D+K+ E+++K +K +
Sbjct: 74 RYLVVLYYNANRAFQKMDTKKKEEQLKLLKEK 105
Score = 27.7 bits (61), Expect = 6.2
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 1631 RRLTVRWNSHKNKENKKDSKRGEKKIKRMKRR 1662
R L V + + K D+K+ E+++K +K +
Sbjct: 74 RYLVVLYYNANRAFQKMDTKKKEEQLKLLKEK 105
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.133 0.390
Gapped
Lambda K H
0.267 0.0578 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 7,350,599
Number of extensions: 366028
Number of successful extensions: 1242
Number of sequences better than 10.0: 1
Number of HSP's gapped: 961
Number of HSP's successfully gapped: 147
Length of query: 1915
Length of database: 2,407,596
Length adjustment: 99
Effective length of query: 1816
Effective length of database: 1,048,326
Effective search space: 1903760016
Effective search space used: 1903760016
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.2 bits)