Query psy960
Match_columns 83
No_of_seqs 102 out of 137
Neff 2.9
Searched_HMMs 29240
Date Fri Aug 16 23:58:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v54_D Cytochrome C oxidase su 99.9 2.4E-28 8.2E-33 174.2 3.6 49 4-52 99-147 (147)
2 2y69_D Cytochrome C oxidase su 99.9 6.5E-28 2.2E-32 175.3 3.6 49 4-52 121-169 (169)
3 1uzc_A Hypothetical protein FL 31.3 47 0.0016 20.2 3.1 31 11-46 6-37 (71)
4 2jtd_A Myomesin-1, skelemin; i 30.6 8.4 0.00029 27.4 -0.5 30 14-47 17-49 (142)
5 3jtz_A Integrase; four strande 28.8 24 0.00082 21.8 1.4 31 6-36 50-82 (88)
6 3ju0_A Phage integrase; four s 28.6 22 0.00077 22.9 1.3 32 6-37 50-83 (108)
7 3zxw_B Ribulose bisphosphate c 25.0 41 0.0014 22.7 2.2 37 15-51 18-54 (118)
8 1uuq_A Mannosyl-oligosaccharid 24.5 65 0.0022 23.9 3.3 26 17-42 175-202 (440)
9 1wdd_S Ribulose bisphosphate c 24.0 43 0.0015 23.0 2.2 29 14-42 19-47 (128)
10 1gk8_I Ribulose bisphosphate c 23.2 46 0.0016 23.2 2.2 28 14-41 19-46 (140)
11 1bwv_S Rubisco, protein (ribul 23.1 45 0.0015 23.1 2.1 37 15-51 13-49 (138)
12 1svd_M Ribulose bisphosphate c 22.8 54 0.0018 21.8 2.4 37 15-51 21-57 (110)
13 3tka_A Ribosomal RNA small sub 21.6 20 0.00067 28.1 0.0 14 29-42 158-171 (347)
14 1rbl_M Ribulose 1,5 bisphospha 21.0 56 0.0019 21.7 2.2 37 15-51 19-55 (109)
15 1bxn_I Rubisco, protein (ribul 20.9 51 0.0017 22.9 2.0 37 15-51 13-49 (139)
16 1cyi_A Cytochrome C6, cytochro 20.7 78 0.0027 17.5 2.5 23 11-33 62-84 (90)
17 3s6n_2 SurviVal of motor neuro 20.4 69 0.0023 24.0 2.8 24 9-32 89-114 (280)
18 3plw_A Recombination enhanceme 20.3 22 0.00074 26.3 0.0 14 17-30 32-45 (186)
19 2knz_A Ubiquilin-4; cytoplasm, 20.2 1E+02 0.0034 17.3 2.9 16 18-33 8-23 (53)
No 1
>1v54_D Cytochrome C oxidase subunit IV isoform 1; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.1.1 PDB: 1oco_D* 1occ_D* 1ocz_D* 1ocr_D* 1v55_D* 2dyr_D* 2dys_D* 2eij_D* 2eik_D* 2eil_D* 2eim_D* 2ein_D* 2occ_D* 2ybb_O* 2zxw_D* 3abk_D* 3abl_D* 3abm_D* 3ag1_D* 3ag2_D* ...
Probab=99.94 E-value=2.4e-28 Score=174.18 Aligned_cols=49 Identities=35% Similarity=0.750 Sum_probs=47.9
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHccCCCCcccccccccccCcccC
Q psy960 4 KVKKIFPEKAETLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWKK 52 (83)
Q Consensus 4 ~k~yVYpp~P~TfseEWkeAQleRMLdmkvNPItG~SSkWDYEkn~WKK 52 (83)
+|.|||||+|+||++|||+||++|||+|++|||+|+||+||||||+|||
T Consensus 99 ~r~~v~~p~P~T~~~Ewqeaq~erm~~~~~nPi~G~ss~wdYe~~~Wkk 147 (147)
T 1v54_D 99 EKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 147 (147)
T ss_dssp HHHHTCCCCCGGGSHHHHHHHHHHHHHTTSSTTTTSGGGEETTTTEECC
T ss_pred HHHHccCCCCCCCCHHHHHHHHHHHHHccCCCCcCchhhhchhhcccCC
Confidence 6889999999999999999999999999999999999999999999997
No 2
>2y69_D Cytochrome C oxidase subunit 4 isoform 1; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=99.94 E-value=6.5e-28 Score=175.32 Aligned_cols=49 Identities=35% Similarity=0.750 Sum_probs=47.9
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHccCCCCcccccccccccCcccC
Q psy960 4 KVKKIFPEKAETLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWKK 52 (83)
Q Consensus 4 ~k~yVYpp~P~TfseEWkeAQleRMLdmkvNPItG~SSkWDYEkn~WKK 52 (83)
+|.|||||+|+||++|||+||+||||+|++|||+|+||+||||||+|||
T Consensus 121 ~r~~v~~p~P~T~~~Ewqeaq~erml~~~~NPitG~SSkwdYe~~~WKk 169 (169)
T 2y69_D 121 EKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 169 (169)
T ss_dssp HHHHTCCCCCGGGSHHHHHHHHHHHHHTTSSTTTTSGGGEETTTTEECC
T ss_pred HHHHccCCCCCCCCHHHHHHHHHHHHHcCCCCCcCchhhhccccceeCC
Confidence 5889999999999999999999999999999999999999999999997
No 3
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=31.32 E-value=47 Score=20.16 Aligned_cols=31 Identities=16% Similarity=0.327 Sum_probs=18.7
Q ss_pred CCCCCC-cHHHHHHHHHHHHHccCCCCcccccccccc
Q psy960 11 EKAETL-SEEHRQEMLQKMIDLRWNPITGTASKWDYE 46 (83)
Q Consensus 11 p~P~Tf-seEWkeAQleRMLdmkvNPItG~SSkWDYE 46 (83)
+.|..| |.|-..++...||+.. |+++.|-++
T Consensus 6 ~~~~~~~t~eea~~~F~~LL~e~-----~V~~~~tWe 37 (71)
T 1uzc_A 6 KKTYTWNTKEEAKQAFKELLKEK-----RVPSNASWE 37 (71)
T ss_dssp CCCCCCCSHHHHHHHHHHHHHHT-----TCCTTCCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHc-----CcCCCCCHH
Confidence 344455 6777777777777765 455555443
No 4
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=30.60 E-value=8.4 Score=27.42 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=21.9
Q ss_pred CCCcHHHHHHHHHHHHHcc---CCCCccccccccccc
Q psy960 14 ETLSEEHRQEMLQKMIDLR---WNPITGTASKWDYEK 47 (83)
Q Consensus 14 ~TfseEWkeAQleRMLdmk---vNPItG~SSkWDYEk 47 (83)
.||++| .|+||+++- .|||-.+-|.|-||=
T Consensus 17 ~tl~ee----eL~rLl~lSheik~P~IpLksel~vEi 49 (142)
T 2jtd_A 17 GSHMEE----EMKRLLALSQEHKFPTVPTKSELAVEI 49 (142)
T ss_dssp ----CC----CSHHHHHCCCCCCCSSCSSSCEEEEEE
T ss_pred ceeCHH----HHHHHHHhhhhccCCcccchhhhhHHH
Confidence 456655 688999874 689999999999963
No 5
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=28.75 E-value=24 Score=21.83 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=19.0
Q ss_pred ccccCCCCC-CCcHHHH-HHHHHHHHHccCCCC
Q psy960 6 KKIFPEKAE-TLSEEHR-QEMLQKMIDLRWNPI 36 (83)
Q Consensus 6 ~yVYpp~P~-TfseEWk-eAQleRMLdmkvNPI 36 (83)
....++.|. ||.+-.+ ..+++.+|..++||-
T Consensus 50 ~~~LG~yp~~sL~~AR~~a~~~r~~l~~Gidp~ 82 (88)
T 3jtz_A 50 RIALGAYPAISLSDARQQREGIRKMLALNINLE 82 (88)
T ss_dssp EEEEEETTTSCHHHHHHHHHHHHHHHTCC----
T ss_pred EEEeECCCCCCHHHHHHHHHHHHHHHHcCCCch
Confidence 344556664 7777775 457889999999995
No 6
>3ju0_A Phage integrase; four stranded beta-sheet, DNA binding protein; 1.60A {Pectobacterium atrosepticum}
Probab=28.65 E-value=22 Score=22.85 Aligned_cols=32 Identities=9% Similarity=0.197 Sum_probs=23.0
Q ss_pred ccccCCCCC-CCcHHHH-HHHHHHHHHccCCCCc
Q psy960 6 KKIFPEKAE-TLSEEHR-QEMLQKMIDLRWNPIT 37 (83)
Q Consensus 6 ~yVYpp~P~-TfseEWk-eAQleRMLdmkvNPIt 37 (83)
.+..+..|. ||.+-.+ ...++.++..++||+.
T Consensus 50 ~~~LG~yp~~SLa~AR~~a~~~r~~l~~GiDP~~ 83 (108)
T 3ju0_A 50 LLALGVYPAVSLADARQRRDEAKKLLAAGIDPSA 83 (108)
T ss_dssp EEEEEEETTSCHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHcCCCHHH
Confidence 344455564 7777775 4578899999999975
No 7
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=25.04 E-value=41 Score=22.73 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=33.2
Q ss_pred CCcHHHHHHHHHHHHHccCCCCcccccccccccCccc
Q psy960 15 TLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWK 51 (83)
Q Consensus 15 TfseEWkeAQleRMLdmkvNPItG~SSkWDYEkn~WK 51 (83)
.||+|-..+|++.+|+++-.|-.=++..=-|.+.-|.
T Consensus 18 ~Lt~eqI~kQV~yll~qGw~~~lE~~d~~~~~~~yW~ 54 (118)
T 3zxw_B 18 PLSDAQIARQIQYAIDQGYHPCVEFNETSNAEIRYWT 54 (118)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCE
T ss_pred CCCHHHHHHHHHHHHhCCCeeEEEeccCCCcccCEEe
Confidence 4779999999999999999999888888788888886
No 8
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=24.48 E-value=65 Score=23.89 Aligned_cols=26 Identities=38% Similarity=0.401 Sum_probs=18.1
Q ss_pred cHHHHHHHHHHH--HHccCCCCcccccc
Q psy960 17 SEEHRQEMLQKM--IDLRWNPITGTASK 42 (83)
Q Consensus 17 seEWkeAQleRM--LdmkvNPItG~SSk 42 (83)
+++++++..+++ +..++||+||++-+
T Consensus 175 ~~~~~~~~~~~~~~l~~R~N~~tg~~yk 202 (440)
T 1uuq_A 175 SEKAQQEYRKTLEKIITRVNSINGKAYV 202 (440)
T ss_dssp CHHHHHHHHHHHHHHHTCBCTTTCCBGG
T ss_pred CHHHHHHHHHHHHHHHhccCCcCCcccC
Confidence 356666665554 45689999999755
No 9
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=24.04 E-value=43 Score=22.97 Aligned_cols=29 Identities=14% Similarity=0.296 Sum_probs=23.8
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCcccccc
Q psy960 14 ETLSEEHRQEMLQKMIDLRWNPITGTASK 42 (83)
Q Consensus 14 ~TfseEWkeAQleRMLdmkvNPItG~SSk 42 (83)
+.||+|-..+|++.+|.++-.|-.=++..
T Consensus 19 P~lt~eqI~kQI~Yll~qGw~p~lEf~d~ 47 (128)
T 1wdd_S 19 PPLTVEDLLKQIEYLLRSKWVPCLEFSKV 47 (128)
T ss_dssp SCCCHHHHHHHHHHHHHTTCEEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHCCCeeeEEecCC
Confidence 35899999999999999998886666543
No 10
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=23.17 E-value=46 Score=23.25 Aligned_cols=28 Identities=18% Similarity=0.324 Sum_probs=22.9
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCccccc
Q psy960 14 ETLSEEHRQEMLQKMIDLRWNPITGTAS 41 (83)
Q Consensus 14 ~TfseEWkeAQleRMLdmkvNPItG~SS 41 (83)
+.||+|--.+|+++||.++-.|=.=++.
T Consensus 19 P~lt~eqI~kQI~YlL~qGw~p~lEf~d 46 (140)
T 1gk8_I 19 PPLTDEQIAAQVDYIVANGWIPCLEFAE 46 (140)
T ss_dssp SCCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEeeEEecc
Confidence 3589999999999999999888655543
No 11
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=23.14 E-value=45 Score=23.14 Aligned_cols=37 Identities=14% Similarity=0.208 Sum_probs=29.7
Q ss_pred CCcHHHHHHHHHHHHHccCCCCcccccccccccCccc
Q psy960 15 TLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWK 51 (83)
Q Consensus 15 TfseEWkeAQleRMLdmkvNPItG~SSkWDYEkn~WK 51 (83)
.||+|--.+|++.||.++-.|=.=++..=-+.+.=|.
T Consensus 13 ~ltdeqI~kQI~Yll~qGw~p~iEf~d~~~~r~~yW~ 49 (138)
T 1bwv_S 13 DLTDEQIKKQIDYMISKKLAIGIEYTNDIHPRNAYWE 49 (138)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEEESCCCTTCCCCE
T ss_pred CCCHHHHHHHHHHHHHCCCeeeEEecCCCCCccCEEe
Confidence 4899999999999999999887777655455666675
No 12
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=22.85 E-value=54 Score=21.79 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=32.5
Q ss_pred CCcHHHHHHHHHHHHHccCCCCcccccccccccCccc
Q psy960 15 TLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWK 51 (83)
Q Consensus 15 TfseEWkeAQleRMLdmkvNPItG~SSkWDYEkn~WK 51 (83)
.||+|--.+|++.+|+++-.|=.=++..=-|.+.-|.
T Consensus 21 ~lt~eqI~kQV~Yll~qGw~p~iEf~d~~~~~~~yW~ 57 (110)
T 1svd_M 21 PMNAERIRAQIKYAIAQGWSPGIEHVEVKNSMNQYWY 57 (110)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEEECGGGTTCSCCE
T ss_pred CCCHHHHHHHHHHHHHCCCeeEEEeccCCccCCcEEe
Confidence 4899999999999999999998888877677788886
No 13
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=21.58 E-value=20 Score=28.08 Aligned_cols=14 Identities=29% Similarity=0.748 Sum_probs=12.8
Q ss_pred HHccCCCCcccccc
Q psy960 29 IDLRWNPITGTASK 42 (83)
Q Consensus 29 LdmkvNPItG~SSk 42 (83)
|||||||=+|+|+.
T Consensus 158 LDMRMd~~~~~tAa 171 (347)
T 3tka_A 158 LDMRMDPTRGQSAA 171 (347)
T ss_dssp SCCCSCTTSSCCHH
T ss_pred cCCCCCCCCCCCHH
Confidence 79999999999885
No 14
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=21.01 E-value=56 Score=21.68 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=31.6
Q ss_pred CCcHHHHHHHHHHHHHccCCCCcccccccccccCccc
Q psy960 15 TLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWK 51 (83)
Q Consensus 15 TfseEWkeAQleRMLdmkvNPItG~SSkWDYEkn~WK 51 (83)
.||+|--.+|+++||+++-.|=.=++..=-+.+.-|.
T Consensus 19 ~lt~eqI~kQI~Yll~qGw~p~lEf~d~~~~~~~yW~ 55 (109)
T 1rbl_M 19 PLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWT 55 (109)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEeccCccccccEEe
Confidence 4899999999999999999998888776566777776
No 15
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=20.86 E-value=51 Score=22.91 Aligned_cols=37 Identities=14% Similarity=0.250 Sum_probs=29.6
Q ss_pred CCcHHHHHHHHHHHHHccCCCCcccccccccccCccc
Q psy960 15 TLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWK 51 (83)
Q Consensus 15 TfseEWkeAQleRMLdmkvNPItG~SSkWDYEkn~WK 51 (83)
.||+|--.+|++.||+++-.|=.=++..=-+.+.=|.
T Consensus 13 ~ltdeqI~kQI~YlL~qGw~p~lE~~d~~~~r~~yW~ 49 (139)
T 1bxn_I 13 ELTDEQITKQLEYCLNQGWAVGLEYTDDPHPRNTYWE 49 (139)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCE
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEeccCCccccCEEe
Confidence 4899999999999999999887777655455666675
No 16
>1cyi_A Cytochrome C6, cytochrome C553; photosynthesis, electron transport protein (cytochrome); HET: HEM; 1.90A {Chlamydomonas reinhardtii} SCOP: a.3.1.1 PDB: 1cyj_A*
Probab=20.67 E-value=78 Score=17.54 Aligned_cols=23 Identities=26% Similarity=0.189 Sum_probs=13.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHccC
Q psy960 11 EKAETLSEEHRQEMLQKMIDLRW 33 (83)
Q Consensus 11 p~P~TfseEWkeAQleRMLdmkv 33 (83)
+....||+|-.++-+..+..+..
T Consensus 62 ~~~~~ls~~ei~~l~~yl~~~~~ 84 (90)
T 1cyi_A 62 AWADRLSEEEIQAVAEYVFKQAT 84 (90)
T ss_dssp CCTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHHhccc
Confidence 33345777777766666666543
No 17
>3s6n_2 SurviVal of motor neuron protein-interacting PROT; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_A
Probab=20.42 E-value=69 Score=23.98 Aligned_cols=24 Identities=13% Similarity=0.207 Sum_probs=16.2
Q ss_pred cCCCCCCC--cHHHHHHHHHHHHHcc
Q psy960 9 FPEKAETL--SEEHRQEMLQKMIDLR 32 (83)
Q Consensus 9 Ypp~P~Tf--seEWkeAQleRMLdmk 32 (83)
..|+|..| |+||+..|+..--++|
T Consensus 89 ~~~~p~~l~Ps~eWq~~~v~~Fs~~R 114 (280)
T 3s6n_2 89 CQPAPEGYSPTLQWQQQQVAQFSTVR 114 (280)
T ss_dssp CCCCCTTCSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCCHHHHHHHHHHHHHHH
Confidence 45566667 7899998886544433
No 18
>3plw_A Recombination enhancement function protein; HNH nuclease, DNAse, hydrolase; 1.40A {Enterobacteria phage P1}
Probab=20.30 E-value=22 Score=26.26 Aligned_cols=14 Identities=36% Similarity=0.368 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHH
Q psy960 17 SEEHRQEMLQKMID 30 (83)
Q Consensus 17 seEWkeAQleRMLd 30 (83)
|.||++.|++++.+
T Consensus 32 ~p~~r~~~~~k~~~ 45 (186)
T 3plw_A 32 DPVWRESQYQKMRD 45 (186)
T ss_dssp --------------
T ss_pred ChHHHHHHHHHHHH
Confidence 78999999999875
No 19
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=20.20 E-value=1e+02 Score=17.28 Aligned_cols=16 Identities=19% Similarity=0.326 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHccC
Q psy960 18 EEHRQEMLQKMIDLRW 33 (83)
Q Consensus 18 eEWkeAQleRMLdmkv 33 (83)
++.-+.+++.+.+|+-
T Consensus 8 e~~~~~~l~~L~~MGF 23 (53)
T 2knz_A 8 EVRFQQQLEQLNSMGF 23 (53)
T ss_dssp HHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHHHcCC
Confidence 4444889999999975
Done!